Tph_c27030 b97c93f9945ef8981ab5f1ae615a21db 528 SUPERFAMILY SSF51556 56 467 3.86E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c27030 b97c93f9945ef8981ab5f1ae615a21db 528 Gene3D G3DSA:3.20.20.140 55 313 3.8E-89 T 14-10-2018 Tph_c27030 b97c93f9945ef8981ab5f1ae615a21db 528 SUPERFAMILY SSF51338 2 513 5.62E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c27030 b97c93f9945ef8981ab5f1ae615a21db 528 Pfam PF07969 Amidohydrolase family 44 259 1.5E-14 T 14-10-2018 IPR013108 Amidohydrolase 3 Tph_c27030 b97c93f9945ef8981ab5f1ae615a21db 528 Pfam PF07969 Amidohydrolase family 362 511 4.7E-18 T 14-10-2018 IPR013108 Amidohydrolase 3 Tph_c27030 b97c93f9945ef8981ab5f1ae615a21db 528 Gene3D G3DSA:3.20.20.140 344 461 2.4E-22 T 14-10-2018 Tph_c27010 065c0beabd52ddae8e553c107f9f9a12 426 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 92 390 6.1E-80 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tph_c27010 065c0beabd52ddae8e553c107f9f9a12 426 SUPERFAMILY SSF53686 14 419 6.81E-97 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c27010 065c0beabd52ddae8e553c107f9f9a12 426 TIGRFAM TIGR00260 thrC: threonine synthase 74 396 6.4E-71 T 14-10-2018 IPR004450 Threonine synthase-like Tph_c27010 065c0beabd52ddae8e553c107f9f9a12 426 Gene3D G3DSA:3.40.50.1100 125 221 1.2E-118 T 14-10-2018 Tph_c27010 065c0beabd52ddae8e553c107f9f9a12 426 Gene3D G3DSA:3.40.50.1100 74 396 1.2E-118 T 14-10-2018 Tph_c27010 065c0beabd52ddae8e553c107f9f9a12 426 PIRSF PIRSF038945 56 422 1.9E-91 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Tph_c01630 956a42c02f0093fb93d11f6eb93a263b 165 Gene3D G3DSA:3.30.70.640 1 161 2.2E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01630 956a42c02f0093fb93d11f6eb93a263b 165 SUPERFAMILY SSF55040 11 155 9.55E-62 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01630 956a42c02f0093fb93d11f6eb93a263b 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.2E-64 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01630 956a42c02f0093fb93d11f6eb93a263b 165 Pfam PF01967 MoaC family 15 150 2.9E-56 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01630 956a42c02f0093fb93d11f6eb93a263b 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 38.078 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 Gene3D G3DSA:3.40.50.150 265 462 2.8E-54 T 14-10-2018 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 191 1.9E-31 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 286 407 1.1E-32 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 SUPERFAMILY SSF53335 275 425 1.47E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 9 199 3.3E-56 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 Gene3D G3DSA:3.40.1010.10 5 107 4.8E-23 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 SUPERFAMILY SSF53790 7 206 4.84E-41 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c05230 5a893f73580bfb1588309ad694109b0a 464 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 283 382 2.2E-5 T 14-10-2018 Tph_c08020 ad215a8d5612e016d32c1632ccc35a3b 660 PIRSF PIRSF001265 1 660 2.9E-264 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c08020 ad215a8d5612e016d32c1632ccc35a3b 660 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 5 660 24.993 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c08020 ad215a8d5612e016d32c1632ccc35a3b 660 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 9 657 8.0E-254 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c08020 ad215a8d5612e016d32c1632ccc35a3b 660 Pfam PF03030 Inorganic H+ pyrophosphatase 17 655 1.6E-272 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c23430 a3e1faecd1b91c36ac5b65d89cee1b8d 291 SUPERFAMILY SSF52540 1 270 3.32E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23430 a3e1faecd1b91c36ac5b65d89cee1b8d 291 SUPERFAMILY SSF54862 58 118 4.19E-20 T 14-10-2018 Tph_c23430 a3e1faecd1b91c36ac5b65d89cee1b8d 291 Gene3D G3DSA:3.30.70.20 64 113 1.6E-12 T 14-10-2018 Tph_c23430 a3e1faecd1b91c36ac5b65d89cee1b8d 291 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c23430 a3e1faecd1b91c36ac5b65d89cee1b8d 291 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 263 1.3E-18 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c23430 a3e1faecd1b91c36ac5b65d89cee1b8d 291 Pfam PF14697 4Fe-4S dicluster domain 62 114 9.9E-11 T 14-10-2018 Tph_c03660 a8336ed1f8003d8723952c1a4cee924a 468 PIRSF PIRSF016636 1 468 1.2E-139 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Tph_c03660 a8336ed1f8003d8723952c1a4cee924a 468 PIRSF PIRSF500217 1 468 3.0E-141 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Tph_c03660 a8336ed1f8003d8723952c1a4cee924a 468 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 146 343 4.5E-25 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 Gene3D G3DSA:1.10.3430.10 24 464 2.2E-150 T 14-10-2018 IPR029020 Ammonium/urea transporter Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 TIGRFAM TIGR00836 amt: ammonium transporter 47 452 2.9E-135 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 ProSitePatterns PS01219 Ammonium transporters signature. 196 221 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 Pfam PF00909 Ammonium Transporter Family 50 452 4.0E-126 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 SUPERFAMILY SSF111352 46 433 6.41E-113 T 14-10-2018 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 PRINTS PR00342 Rhesus blood group protein signature 240 258 8.3E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 PRINTS PR00342 Rhesus blood group protein signature 327 345 8.3E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 PRINTS PR00342 Rhesus blood group protein signature 87 104 8.3E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tph_c08750 510b1939361e4d85d68077ef5b1e17cb 465 PRINTS PR00342 Rhesus blood group protein signature 203 218 8.3E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Tph_c17010 f43623e7586656ea78eb64b450ca06c5 1134 SUPERFAMILY SSF52540 43 219 2.34E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17010 f43623e7586656ea78eb64b450ca06c5 1134 Gene3D G3DSA:3.40.50.300 37 226 5.2E-6 T 14-10-2018 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 Gene3D G3DSA:1.10.287.990 33 96 7.6E-24 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 109 205 2.3E-33 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 16 96 2.1E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 SUPERFAMILY SSF46609 11 97 8.25E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 PRINTS PR01703 Manganese superoxide dismutase signature 79 92 2.4E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 PRINTS PR01703 Manganese superoxide dismutase signature 40 53 2.4E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 PRINTS PR01703 Manganese superoxide dismutase signature 132 140 2.4E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 PRINTS PR01703 Manganese superoxide dismutase signature 19 30 2.4E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 PRINTS PR01703 Manganese superoxide dismutase signature 170 182 2.4E-19 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 Gene3D G3DSA:2.40.500.20 97 220 7.3E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 PIRSF PIRSF000349 1 213 7.5E-76 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 SUPERFAMILY SSF54719 95 209 7.59E-38 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c26650 47e2a38a167c74f01ccd3705343db076 222 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 172 179 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 SUPERFAMILY SSF52172 4 180 2.99E-35 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 PIRSF PIRSF036382 3 187 3.4E-39 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 SMART SM01012 125 180 6.0E-25 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 Pfam PF03861 ANTAR domain 128 180 8.9E-23 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 Pfam PF00072 Response regulator receiver domain 13 89 9.7E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 Gene3D G3DSA:3.40.50.2300 3 114 5.8E-11 T 14-10-2018 Tph_c08540 c9729dabeb2142638247702bceb4a21d 189 Gene3D G3DSA:1.10.10.10 127 187 1.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c01230 452c1b7b817535021ecd47e793bc4445 333 SUPERFAMILY SSF102114 53 267 2.35E-25 T 14-10-2018 Tph_c01230 452c1b7b817535021ecd47e793bc4445 333 Gene3D G3DSA:3.20.20.70 3 322 6.9E-26 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c01230 452c1b7b817535021ecd47e793bc4445 333 Pfam PF04055 Radical SAM superfamily 68 215 9.9E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c08440 636f71181ddb6c52626c64337ae0e6eb 84 SUPERFAMILY SSF82697 2 78 1.92E-28 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08440 636f71181ddb6c52626c64337ae0e6eb 84 Gene3D G3DSA:3.30.1280.10 1 84 2.5E-32 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08440 636f71181ddb6c52626c64337ae0e6eb 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 81 6.6E-32 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08440 636f71181ddb6c52626c64337ae0e6eb 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 79 7.0E-19 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08440 636f71181ddb6c52626c64337ae0e6eb 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 79 8.3E-33 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08440 636f71181ddb6c52626c64337ae0e6eb 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 22.641 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 165 2.4E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SMART SM00838 582 670 7.7E-48 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SMART SM00889 463 580 2.7E-70 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Pfam PF03764 Elongation factor G, domain IV 462 580 7.2E-45 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SUPERFAMILY SSF54211 465 581 1.21E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SUPERFAMILY SSF52540 4 278 2.75E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Pfam PF14492 Elongation Factor G, domain II 387 459 3.0E-30 T 14-10-2018 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Pfam PF00009 Elongation factor Tu GTP binding domain 8 278 3.7E-49 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Gene3D G3DSA:3.30.70.240 586 657 1.4E-92 T 14-10-2018 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Gene3D G3DSA:3.30.230.10 467 670 1.4E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 675 3.9E-236 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 PRINTS PR00315 GTP-binding elongation factor signature 11 24 6.6E-8 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 PRINTS PR00315 GTP-binding elongation factor signature 129 138 6.6E-8 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 PRINTS PR00315 GTP-binding elongation factor signature 57 65 6.6E-8 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 PRINTS PR00315 GTP-binding elongation factor signature 77 87 6.6E-8 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SUPERFAMILY SSF54980 385 462 4.32E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Gene3D G3DSA:3.30.70.870 389 466 2.8E-26 T 14-10-2018 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Pfam PF03144 Elongation factor Tu domain 2 307 374 7.1E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SUPERFAMILY SSF50447 261 387 2.99E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Pfam PF00679 Elongation factor G C-terminus 582 669 4.9E-32 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 SUPERFAMILY SSF54980 585 675 3.17E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Gene3D G3DSA:2.40.30.10 281 388 1.1E-36 T 14-10-2018 Tph_c14850 26fc83ecbcbb539b4fd09d980594eaa8 681 Gene3D G3DSA:3.40.50.300 2 280 8.9E-87 T 14-10-2018 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 Gene3D G3DSA:3.90.226.10 33 285 2.6E-88 T 14-10-2018 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 285 39.496 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 8.8E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 8.8E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 8.8E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 8.8E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 8.8E-38 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 34 284 8.2E-110 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 SUPERFAMILY SSF52096 35 283 4.97E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c13700 edad88197e2a32d6fd59ae88dcee8024 287 Pfam PF01039 Carboxyl transferase domain 64 243 1.6E-20 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 2 100 7.5E-24 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 176 22.85 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 Gene3D G3DSA:3.30.160.100 1 109 3.5E-25 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 Gene3D G3DSA:3.30.505.50 130 177 2.7E-27 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 SUPERFAMILY SSF69754 2 106 3.27E-25 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 3.6E-24 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Tph_c06460 9e6cd1231f8bc98e000d7547c79d3d8d 177 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 117 172 5.2E-31 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Tph_c05730 463de76204864460e169a936df4de96b 621 Gene3D G3DSA:3.40.50.2030 403 616 1.9E-87 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c05730 463de76204864460e169a936df4de96b 621 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 6 619 6.0E-222 T 14-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Tph_c05730 463de76204864460e169a936df4de96b 621 SUPERFAMILY SSF56821 4 619 3.14E-203 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Tph_c05730 463de76204864460e169a936df4de96b 621 Pfam PF03063 Prismane/CO dehydrogenase family 43 600 2.0E-172 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c05730 463de76204864460e169a936df4de96b 621 Gene3D G3DSA:3.40.50.2030 233 400 9.4E-72 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c05730 463de76204864460e169a936df4de96b 621 Gene3D G3DSA:1.20.1270.30 60 232 1.5E-73 T 14-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Tph_c05730 463de76204864460e169a936df4de96b 621 PIRSF PIRSF005023 1 620 2.9E-257 T 14-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Tph_c10990 21f934def367a15bf7bba21a5a3c5bf9 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 86 8.0E-32 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Tph_c10990 21f934def367a15bf7bba21a5a3c5bf9 90 Pfam PF01313 Bacterial export proteins, family 3 6 78 1.5E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tph_c10990 21f934def367a15bf7bba21a5a3c5bf9 90 PIRSF PIRSF004669 1 88 7.8E-33 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tph_c10990 21f934def367a15bf7bba21a5a3c5bf9 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.3E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tph_c10990 21f934def367a15bf7bba21a5a3c5bf9 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.3E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tph_c10990 21f934def367a15bf7bba21a5a3c5bf9 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.3E-23 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Tph_c25900 b8efba91705502ad136b06da903217b0 127 PIRSF PIRSF002133 1 124 1.0E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.401 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25900 b8efba91705502ad136b06da903217b0 127 Pfam PF00164 Ribosomal protein S12/S23 12 123 3.1E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 124 2.8E-68 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25900 b8efba91705502ad136b06da903217b0 127 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 Gene3D G3DSA:2.40.50.140 1 127 9.4E-66 T 14-10-2018 Tph_c25900 b8efba91705502ad136b06da903217b0 127 SUPERFAMILY SSF50249 2 123 3.34E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c25900 b8efba91705502ad136b06da903217b0 127 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25900 b8efba91705502ad136b06da903217b0 127 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.4E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 Pfam PF01743 Poly A polymerase head domain 23 148 7.7E-34 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 301 444 4.5E-11 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 Gene3D G3DSA:1.10.3090.10 148 439 9.3E-58 T 14-10-2018 Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 175 235 1.1E-21 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 Gene3D G3DSA:3.30.460.10 5 147 5.2E-42 T 14-10-2018 Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 SUPERFAMILY SSF81891 146 453 2.22E-61 T 14-10-2018 Tph_c09560 f7cdd7780c905fb3986b1a5c4baa9ecf 459 SUPERFAMILY SSF81301 3 143 2.51E-36 T 14-10-2018 Tph_c29130 ac16f454e79d6925777efef081b40548 404 Gene3D G3DSA:3.40.50.2000 9 370 3.0E-36 T 14-10-2018 Tph_c29130 ac16f454e79d6925777efef081b40548 404 Pfam PF13439 Glycosyltransferase Family 4 15 166 5.2E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c29130 ac16f454e79d6925777efef081b40548 404 SUPERFAMILY SSF53756 7 370 3.56E-47 T 14-10-2018 Tph_c29130 ac16f454e79d6925777efef081b40548 404 Pfam PF00534 Glycosyl transferases group 1 180 351 2.3E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c29130 ac16f454e79d6925777efef081b40548 404 Gene3D G3DSA:3.40.50.2000 165 355 3.0E-36 T 14-10-2018 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 222 38.004 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 275 3.4E-79 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 SUPERFAMILY SSF53790 1 220 8.77E-84 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 PIRSF PIRSF005917 1 276 1.4E-101 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 Gene3D G3DSA:3.40.1010.10 1 110 2.0E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 Gene3D G3DSA:3.30.950.10 111 226 4.1E-40 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tph_c28760 c6e1d564a4a275772154dec09ed56d41 276 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 203 2.0E-30 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c20410 5dcb22ee89e755169d57da7fbd4142d0 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 206 2.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c20410 5dcb22ee89e755169d57da7fbd4142d0 217 SUPERFAMILY SSF161098 12 197 9.55E-33 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c20410 5dcb22ee89e755169d57da7fbd4142d0 217 Gene3D G3DSA:1.10.3720.10 8 207 7.2E-30 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 Gene3D G3DSA:1.10.287.180 4 77 9.0E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 156 2.4E-53 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 SUPERFAMILY SSF46557 4 78 4.45E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 30.805 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 PIRSF PIRSF006092 2 158 4.0E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.5E-29 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 4.6E-26 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 SUPERFAMILY SSF54534 82 156 3.01E-23 T 14-10-2018 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 Gene3D G3DSA:3.10.50.30 78 157 3.0E-28 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Tph_c26200 447c25c66999d1d14e69393c961dba3c 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Tph_c00300 1e18602d52c5b9b38102fd37adf39451 258 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 27 212 1.7E-48 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tph_c00300 1e18602d52c5b9b38102fd37adf39451 258 PIRSF PIRSF003078 2 221 6.7E-51 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tph_c00300 1e18602d52c5b9b38102fd37adf39451 258 Gene3D G3DSA:3.40.50.150 2 239 3.2E-77 T 14-10-2018 Tph_c00300 1e18602d52c5b9b38102fd37adf39451 258 SUPERFAMILY SSF53335 10 238 1.32E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c00300 1e18602d52c5b9b38102fd37adf39451 258 Pfam PF02527 rRNA small subunit methyltransferase G 24 201 8.0E-47 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tph_c00300 1e18602d52c5b9b38102fd37adf39451 258 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 215 25.503 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 Gene3D G3DSA:3.40.1160.10 1 251 1.6E-89 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 4.8E-118 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 Gene3D G3DSA:3.30.70.260 252 400 6.5E-57 T 14-10-2018 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 401 2.3E-131 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 Gene3D G3DSA:3.30.70.260 260 337 6.5E-57 T 14-10-2018 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 Pfam PF00696 Amino acid kinase family 3 230 4.8E-55 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 SUPERFAMILY SSF55021 250 325 1.76E-16 T 14-10-2018 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 SUPERFAMILY SSF53633 4 240 1.17E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 SUPERFAMILY SSF55021 326 401 3.09E-24 T 14-10-2018 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 PIRSF PIRSF000726 1 61 1.9E-18 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 PIRSF PIRSF000726 56 402 1.2E-123 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 Pfam PF01842 ACT domain 267 324 9.8E-9 T 14-10-2018 IPR002912 ACT domain Tph_c15530 2fe1c29fce7504c8ba026e9ccea90cd5 402 Pfam PF13840 ACT domain 336 397 8.3E-17 T 14-10-2018 IPR027795 CASTOR, ACT domain Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 PIRSF PIRSF000124 1 452 1.4E-132 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 SUPERFAMILY SSF52413 322 447 1.57E-36 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 335 436 4.7E-34 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 SMART SM00984 334 437 4.5E-48 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 433 4.8E-133 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 Gene3D G3DSA:1.20.5.100 219 249 1.8E-18 T 14-10-2018 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 SUPERFAMILY SSF48179 219 313 1.08E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 Gene3D G3DSA:3.40.50.720 1 197 7.1E-65 T 14-10-2018 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 PIRSF PIRSF500134 1 452 1.6E-157 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 Gene3D G3DSA:3.40.50.720 250 452 2.4E-75 T 14-10-2018 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 SUPERFAMILY SSF51735 1 196 6.35E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 3.1E-53 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c02690 fc3ab266e9047e61f9a08466f159d3bb 452 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 220 311 1.2E-38 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 Gene3D G3DSA:1.10.287.1080 380 511 1.1E-42 T 14-10-2018 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 Gene3D G3DSA:1.10.287.1080 254 376 1.3E-43 T 14-10-2018 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 SUPERFAMILY SSF101386 256 356 9.72E-23 T 14-10-2018 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 217 9.3E-19 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 Gene3D G3DSA:3.40.1010.10 1 124 8.9E-7 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 SUPERFAMILY SSF53790 5 235 1.24E-17 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 SUPERFAMILY SSF101386 386 485 5.61E-23 T 14-10-2018 Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 TIGRFAM TIGR00444 mazG: MazG family protein 263 506 9.2E-90 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 PIRSF PIRSF002845 3 510 1.0E-155 T 14-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 418 475 8.4E-8 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Tph_c28230 a7510ff0455955a2cb7c1178db5d303b 512 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 279 352 9.4E-28 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 370 385 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 SUPERFAMILY SSF52540 282 528 2.49E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Gene3D G3DSA:1.10.8.60 455 534 1.7E-25 T 14-10-2018 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 SMART SM00382 303 447 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Pfam PF00158 Sigma-54 interaction domain 283 450 6.8E-71 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Gene3D G3DSA:1.10.10.60 542 588 9.4E-14 T 14-10-2018 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 497 506 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Gene3D G3DSA:3.30.450.20 166 271 4.4E-11 T 14-10-2018 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 307 320 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Pfam PF02954 Bacterial regulatory protein, Fis family 543 586 7.8E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 SUPERFAMILY SSF46689 542 589 2.27E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Pfam PF13188 PAS domain 157 205 9.6E-5 T 14-10-2018 IPR000014 PAS domain Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 Gene3D G3DSA:3.40.50.300 272 454 1.1E-67 T 14-10-2018 Tph_c27070 c7415fb9d49f14402b6f6b4084e2f4fd 593 SUPERFAMILY SSF55785 149 193 9.77E-5 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c09670 8a7e51c69abffc9447a6a046afaad53c 261 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 252 5.6E-67 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Tph_c09670 8a7e51c69abffc9447a6a046afaad53c 261 SUPERFAMILY SSF53067 1 255 4.65E-40 T 14-10-2018 Tph_c09670 8a7e51c69abffc9447a6a046afaad53c 261 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 2 251 1.1E-88 T 14-10-2018 IPR008275 CoA enzyme activase Tph_c09670 8a7e51c69abffc9447a6a046afaad53c 261 Gene3D G3DSA:3.30.420.40 95 235 2.7E-87 T 14-10-2018 Tph_c09670 8a7e51c69abffc9447a6a046afaad53c 261 Gene3D G3DSA:3.30.420.40 5 252 2.7E-87 T 14-10-2018 Tph_c17070 714bac7148556323cb13e6efaf2c77ac 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 302 5.6E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17070 714bac7148556323cb13e6efaf2c77ac 324 Gene3D G3DSA:3.40.50.300 5 324 6.5E-90 T 14-10-2018 Tph_c17070 714bac7148556323cb13e6efaf2c77ac 324 SMART SM00382 40 232 8.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17070 714bac7148556323cb13e6efaf2c77ac 324 SUPERFAMILY SSF52540 7 254 1.55E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17070 714bac7148556323cb13e6efaf2c77ac 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 321 5.4E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17070 714bac7148556323cb13e6efaf2c77ac 324 Pfam PF00005 ABC transporter 32 183 1.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 SMART SM01001 4 153 8.8E-93 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 Pfam PF00731 AIR carboxylase 6 148 9.2E-63 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 PIRSF PIRSF001338 1 164 7.7E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 SUPERFAMILY SSF52255 4 162 9.16E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 157 33.51 T 14-10-2018 IPR033747 Class I PurE Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 Gene3D G3DSA:3.40.50.7700 1 164 4.0E-71 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tph_c08420 4dfc024df2cbaaa7256903e428caf4e2 164 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 160 1.1E-61 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 292 382 6.9E-14 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 Pfam PF13353 4Fe-4S single cluster domain 41 129 8.9E-10 T 14-10-2018 Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 PIRSF PIRSF037420 22 391 3.8E-127 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 Pfam PF04055 Radical SAM superfamily 44 187 1.4E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 Gene3D G3DSA:3.20.20.70 36 351 4.2E-58 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 Pfam PF13186 Iron-sulfur cluster-binding domain 292 355 7.6E-7 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 SUPERFAMILY SSF102114 40 363 7.06E-72 T 14-10-2018 Tph_c15310 7c76488dfa6e7b4083b8cbff49859b2d 391 SMART SM00729 39 238 1.6E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c27770 bf472e0baed00582dff0523be7c44519 381 Pfam PF04055 Radical SAM superfamily 70 226 4.9E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c27770 bf472e0baed00582dff0523be7c44519 381 SUPERFAMILY SSF102114 25 316 4.45E-50 T 14-10-2018 Tph_c27770 bf472e0baed00582dff0523be7c44519 381 Gene3D G3DSA:3.20.20.70 4 355 1.2E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c27770 bf472e0baed00582dff0523be7c44519 381 PIRSF PIRSF004762 2 363 2.1E-69 T 14-10-2018 Tph_c27770 bf472e0baed00582dff0523be7c44519 381 SMART SM00729 63 276 2.0E-13 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c27770 bf472e0baed00582dff0523be7c44519 381 TIGRFAM TIGR03910 pyrrolys_PylB: pyrrolysine biosynthesis radical SAM protein 10 354 7.2E-149 T 14-10-2018 IPR023891 Pyrrolysine biosynthesis protein PylB GO:0071524 KEGG: 00300+5.4.99.58|MetaCyc: PWY-6994 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.0E-23 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Gene3D G3DSA:2.20.25.90 221 276 2.0E-21 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Gene3D G3DSA:3.10.20.740 3 125 8.8E-46 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 192 203 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Gene3D G3DSA:3.40.50.740 279 353 2.6E-27 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Pfam PF00037 4Fe-4S binding domain 188 208 4.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 SMART SM00929 85 125 4.2E-17 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 222 275 2.9E-19 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 123 4.7E-18 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Pfam PF00384 Molybdopterin oxidoreductase 278 352 1.1E-16 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 SUPERFAMILY SSF54862 78 214 1.59E-39 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 226 243 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 SUPERFAMILY SSF54292 4 76 1.04E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 SUPERFAMILY SSF53706 190 352 1.96E-65 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 Gene3D G3DSA:3.30.70.20 128 210 7.9E-26 T 14-10-2018 Tph_c27280 0896f6b9d00ad8f3fb132d7fcff48e40 353 SMART SM00926 221 275 1.3E-20 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 PIRSF PIRSF000077 2 108 1.3E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 1.3E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 Pfam PF00085 Thioredoxin 6 107 1.6E-33 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 SUPERFAMILY SSF52833 3 108 7.51E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 PRINTS PR00421 Thioredoxin family signature 72 83 6.7E-8 T 14-10-2018 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 PRINTS PR00421 Thioredoxin family signature 32 41 6.7E-8 T 14-10-2018 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 PRINTS PR00421 Thioredoxin family signature 24 32 6.7E-8 T 14-10-2018 Tph_c17320 30891c9282311d65cd58a0ae6c64de44 109 Gene3D G3DSA:3.40.30.10 5 109 4.1E-36 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Pfam PF12826 Helix-hairpin-helix motif 508 570 8.0E-23 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:1.10.150.20 429 501 2.2E-28 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SMART SM00532 6 445 7.5E-269 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 405 431 2.5E-8 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:2.20.70.80 389 427 2.1E-11 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 PIRSF PIRSF001604 1 667 1.1E-251 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 316 5.8E-131 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SUPERFAMILY SSF56091 5 314 6.48E-122 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SUPERFAMILY SSF47781 402 580 3.19E-58 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SMART SM00278 541 560 1.9 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SMART SM00278 443 462 360.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SMART SM00278 477 496 2.2 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 589 663 7.1E-18 T 14-10-2018 IPR001357 BRCT domain Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:1.10.150.20 502 583 6.1E-26 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 329 344 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 659 1.6E-262 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:3.40.50.10190 589 666 8.8E-29 T 14-10-2018 IPR036420 BRCT domain superfamily Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:2.40.50.140 316 388 3.6E-30 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 320 395 5.9E-32 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SUPERFAMILY SSF52113 587 664 1.28E-20 T 14-10-2018 IPR036420 BRCT domain superfamily Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SUPERFAMILY SSF50249 315 395 2.06E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:1.10.287.610 4 73 8.4E-33 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Hamap MF_01588 DNA ligase [ligA]. 5 664 51.3 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 SMART SM00292 590 667 2.5E-16 T 14-10-2018 IPR001357 BRCT domain Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Gene3D G3DSA:3.30.470.90 74 315 6.0E-99 T 14-10-2018 Tph_c08910 dc39ef6c46735b49a5bd7dc07fa9563d 667 Pfam PF14520 Helix-hairpin-helix domain 443 499 3.5E-7 T 14-10-2018 Tph_c01320 56218d4392f899313f59fd743cab4a51 262 SUPERFAMILY SSF56281 3 261 5.63E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c01320 56218d4392f899313f59fd743cab4a51 262 SMART SM00849 37 226 2.3E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c01320 56218d4392f899313f59fd743cab4a51 262 Gene3D G3DSA:3.60.15.10 2 261 1.1E-63 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c01320 56218d4392f899313f59fd743cab4a51 262 Pfam PF12706 Beta-lactamase superfamily domain 48 226 9.8E-36 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 2.9E-55 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00096 Glutamine amidotransferase superfamily signature 216 225 1.0E-10 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00096 Glutamine amidotransferase superfamily signature 329 342 1.0E-10 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00096 Glutamine amidotransferase superfamily signature 243 254 1.0E-10 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 SUPERFAMILY SSF52021 1 147 3.53E-60 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00097 Anthranilate synthase component II signature 216 225 5.5E-7 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00097 Anthranilate synthase component II signature 243 254 5.5E-7 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00097 Anthranilate synthase component II signature 329 342 5.5E-7 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 SUPERFAMILY SSF52317 148 352 1.14E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 SMART SM01097 1 131 2.6E-92 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 213 227 2.3E-37 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 277 2.3E-37 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 296 2.3E-37 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 243 259 2.3E-37 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 174 188 2.3E-37 T 14-10-2018 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 352 1.2E-149 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 Gene3D G3DSA:3.50.30.20 1 148 3.0E-62 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 47.892 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 Pfam PF00117 Glutamine amidotransferase class-I 176 352 7.5E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c14460 8b1b1d69779159ee0cbb92c91b4446fa 354 Gene3D G3DSA:3.40.50.880 149 354 5.7E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 SMART SM00846 3 152 8.8E-101 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 SUPERFAMILY SSF51735 3 168 2.77E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.3E-67 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.6E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.6E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.6E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.6E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.6E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 SUPERFAMILY SSF55347 152 314 5.66E-73 T 14-10-2018 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.8E-39 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 Gene3D G3DSA:3.30.360.10 151 315 1.9E-155 T 14-10-2018 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 Gene3D G3DSA:3.40.50.720 4 329 1.9E-155 T 14-10-2018 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 PIRSF PIRSF000149 1 334 3.4E-139 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.4E-135 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06740 2090409c46050c31bca2a7abbe5cfda6 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 Pfam PF04851 Type III restriction enzyme, res subunit 128 292 4.2E-10 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 SUPERFAMILY SSF52540 115 314 7.3E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 TIGRFAM TIGR00595 priA: primosomal protein N' 153 660 5.3E-188 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 SUPERFAMILY SSF52540 149 577 8.87E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 SMART SM00487 125 323 9.9E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 Gene3D G3DSA:3.40.50.300 117 311 3.8E-69 T 14-10-2018 Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 Pfam PF00271 Helicase conserved C-terminal domain 426 524 4.1E-6 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 Hamap MF_00983 Probable primosomal protein N' [priA]. 11 663 23.841 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 Gene3D G3DSA:1.10.8.630 5 110 4.3E-19 T 14-10-2018 Tph_c14300 8ae3278a3a0aec578ffc00a8512a63e2 663 SMART SM00490 428 525 5.6E-5 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c23820 a4f9a61988570687f885e4fe115ef17d 566 SUPERFAMILY SSF53098 262 509 2.96E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c23820 a4f9a61988570687f885e4fe115ef17d 566 Pfam PF01609 Transposase DDE domain 251 496 1.5E-12 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 Pfam PF00753 Metallo-beta-lactamase superfamily 555 727 6.1E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 Gene3D G3DSA:3.60.15.10 546 813 2.7E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 157 800 2.2E-67 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 Pfam PF03772 Competence protein 242 503 4.5E-62 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 SMART SM00849 558 772 5.2E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 263 433 1.1E-23 T 14-10-2018 IPR004477 ComEC/Rec2-related protein Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 Pfam PF13567 Domain of unknown function (DUF4131) 30 193 2.4E-21 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 Tph_c21280 885dbbd0d36ed2e1067fac1f72e65cb1 818 SUPERFAMILY SSF56281 546 813 4.33E-46 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c17090 3119010748b51914419be63cf86174fd 296 Gene3D G3DSA:1.10.3720.10 85 292 1.6E-20 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17090 3119010748b51914419be63cf86174fd 296 SUPERFAMILY SSF161098 90 279 4.84E-22 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17090 3119010748b51914419be63cf86174fd 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 19 72 1.2E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Tph_c17090 3119010748b51914419be63cf86174fd 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 1.5E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 Gene3D G3DSA:1.20.1480.50 179 259 1.5E-5 T 14-10-2018 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 Pfam PF17202 Single cache domain 3 76 176 6.2E-33 T 14-10-2018 IPR033463 Single cache domain 3 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 Pfam PF00672 HAMP domain 208 249 2.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 26 6.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 6.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 6.1E-23 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 SUPERFAMILY SSF58104 224 560 1.83E-76 T 14-10-2018 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 Gene3D G3DSA:1.10.287.950 260 560 5.3E-73 T 14-10-2018 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 SMART SM00283 285 560 4.4E-81 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 SMART SM00304 204 256 1.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 SMART SM00304 344 396 91.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 331 513 2.1E-48 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c09690 358e98867769f726f9f0703cf03eed11 604 SUPERFAMILY SSF103190 69 170 1.28E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tph_c19600 267fda854d89ab5f5d7bd89a7c044c71 140 SUPERFAMILY SSF51230 9 133 1.99E-32 T 14-10-2018 IPR011053 Single hybrid motif Tph_c19600 267fda854d89ab5f5d7bd89a7c044c71 140 Gene3D G3DSA:2.40.50.100 7 138 5.3E-40 T 14-10-2018 Tph_c19600 267fda854d89ab5f5d7bd89a7c044c71 140 Pfam PF01597 Glycine cleavage H-protein 13 133 3.2E-35 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 143 158 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 SUPERFAMILY SSF53271 84 317 2.02E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 SMART SM01400 19 135 2.7E-78 T 14-10-2018 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 19 326 50.623 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 20 326 1.8E-126 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 Gene3D G3DSA:3.40.50.2020 22 314 1.2E-126 T 14-10-2018 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 218 325 1.5E-28 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 Gene3D G3DSA:3.40.50.2020 162 302 1.2E-126 T 14-10-2018 Tph_c28330 a3acc22feacff0e1de87a03dcb044f8b 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 19 135 4.7E-48 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Tph_c16040 45875473decd3f818e3f8f94e190dcb7 117 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 104 2.6E-24 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 Tph_c16040 45875473decd3f818e3f8f94e190dcb7 117 SUPERFAMILY SSF52091 1 109 1.57E-26 T 14-10-2018 IPR036513 STAS domain superfamily Tph_c16040 45875473decd3f818e3f8f94e190dcb7 117 Pfam PF01740 STAS domain 3 103 7.0E-16 T 14-10-2018 IPR002645 STAS domain Tph_c16040 45875473decd3f818e3f8f94e190dcb7 117 Gene3D G3DSA:3.30.750.24 4 115 9.7E-28 T 14-10-2018 IPR036513 STAS domain superfamily Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 TIGRFAM TIGR02063 RNase_R: ribonuclease R 21 717 3.7E-254 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SUPERFAMILY SSF50249 62 144 5.14E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Pfam PF00773 RNB domain 258 586 1.8E-113 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Gene3D G3DSA:2.40.50.140 638 723 2.0E-23 T 14-10-2018 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Gene3D G3DSA:2.40.50.140 143 212 4.5E-11 T 14-10-2018 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Gene3D G3DSA:2.40.50.140 65 142 4.6E-16 T 14-10-2018 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SMART SM00357 147 212 0.17 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SMART SM00357 81 142 1.2E-5 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SUPERFAMILY SSF50249 135 235 1.26E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 ProSitePatterns PS01175 Ribonuclease II family signature. 554 578 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SUPERFAMILY SSF46785 22 73 3.41E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SMART SM00316 635 717 5.7E-18 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Hamap MF_01895 Ribonuclease R [rnr]. 36 717 58.324 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SUPERFAMILY SSF50249 218 634 2.0E-146 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SUPERFAMILY SSF50249 637 716 2.79E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Pfam PF00575 S1 RNA binding domain 634 715 1.9E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Pfam PF08206 Ribonuclease B OB domain 82 141 1.4E-17 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 Pfam PF08206 Ribonuclease B OB domain 160 210 9.3E-9 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 66 717 4.6E-211 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 Tph_c07140 9b0bcb21645f901343849d38c8fe16d5 725 SMART SM00955 258 587 8.1E-175 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 SUPERFAMILY SSF53748 3 392 3.89E-153 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 Gene3D G3DSA:3.40.50.1260 170 382 2.9E-160 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 Pfam PF00162 Phosphoglycerate kinase 6 381 8.7E-159 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 392 42.23 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 Gene3D G3DSA:3.40.50.1260 8 390 2.9E-160 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PIRSF PIRSF000724 1 393 1.4E-151 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 138 160 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 168 190 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 345 356 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 32 54 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06750 bb677990a94442c4e458f9f7c2621c96 393 PRINTS PR00477 Phosphoglycerate kinase family signature 368 385 1.1E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c11210 48f42a7d0f3c20a7e7419313dabf95c5 278 Pfam PF01148 Cytidylyltransferase family 14 275 1.7E-57 T 14-10-2018 Tph_c11210 48f42a7d0f3c20a7e7419313dabf95c5 278 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 234 260 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Tph_c25530 165c27bb35931c50957343ad0cddd6cc 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.965 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Tph_c25530 165c27bb35931c50957343ad0cddd6cc 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Tph_c25530 165c27bb35931c50957343ad0cddd6cc 130 SUPERFAMILY SSF54211 6 130 6.83E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c25530 165c27bb35931c50957343ad0cddd6cc 130 Gene3D G3DSA:3.30.230.10 1 130 8.5E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c25530 165c27bb35931c50957343ad0cddd6cc 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.6E-48 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 693 707 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1047 12.914 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SUPERFAMILY SSF52440 541 659 1.29E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 323 2.4E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 657 857 4.0E-40 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 820 827 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SUPERFAMILY SSF52440 1 117 1.73E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 1 1055 13.653 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SUPERFAMILY SSF48108 385 538 9.94E-51 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SMART SM01209 663 827 0.002 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SUPERFAMILY SSF56059 118 389 3.36E-109 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SUPERFAMILY SSF56059 657 917 9.72E-97 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SMART SM00851 939 1026 1.7E-30 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Gene3D G3DSA:3.40.50.1380 920 1057 2.8E-43 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SUPERFAMILY SSF52335 919 1044 3.92E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Gene3D G3DSA:1.10.1030.10 398 537 7.4E-49 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 229 246 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 194 213 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 158 170 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 286 315 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 368 386 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 9 23 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 38 48 3.0E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Gene3D G3DSA:3.40.50.20 1 106 2.4E-44 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Gene3D G3DSA:3.30.470.20 650 919 7.0E-106 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Pfam PF02142 MGS-like domain 940 1026 3.1E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 1 1037 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Gene3D G3DSA:3.30.470.20 110 391 7.2E-127 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 SMART SM01096 410 531 2.5E-67 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Gene3D G3DSA:3.40.50.20 539 646 7.1E-47 T 14-10-2018 Tph_c14450 443d7cd2f6015394f1bacdfb49add507 1057 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 413 531 4.1E-44 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c05550 4567c81da2acf426f0afb4e261d4fc0f 277 Gene3D G3DSA:3.40.50.2020 115 253 1.2E-18 T 14-10-2018 Tph_c05550 4567c81da2acf426f0afb4e261d4fc0f 277 SUPERFAMILY SSF53271 62 244 2.1E-31 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 SUPERFAMILY SSF55979 2 117 1.63E-19 T 14-10-2018 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 SUPERFAMILY SSF55979 246 367 2.39E-20 T 14-10-2018 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 SUPERFAMILY SSF55979 140 243 1.78E-17 T 14-10-2018 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 SMART SM00480 17 365 1.3E-68 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 6.1E-73 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.8E-23 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 Gene3D G3DSA:3.70.10.10 138 367 8.4E-91 T 14-10-2018 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 PIRSF PIRSF000804 1 369 2.7E-81 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 Gene3D G3DSA:3.10.150.10 2 241 8.4E-91 T 14-10-2018 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 246 358 5.9E-17 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tph_c00020 20ffb47a089f8e31f6fabcc264c595d3 371 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 242 9.2E-19 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Tph_c00060 86425134abab40d6878c141e542f9470 902 SMART SM00831 5 79 4.1E-30 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 606 716 7.4E-36 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 179 2.6E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 348 4.3E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 SUPERFAMILY SSF81653 117 227 1.2E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 Pfam PF00122 E1-E2 ATPase 114 307 2.8E-53 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 SUPERFAMILY SSF56784 325 740 3.22E-65 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c00060 86425134abab40d6878c141e542f9470 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 74 1.7E-23 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 Gene3D G3DSA:1.20.1110.10 57 889 0.0 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 SUPERFAMILY SSF81665 6 895 7.06E-139 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 607 623 1.4E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 635 651 1.4E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 491 509 1.4E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 667 692 1.4E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 SUPERFAMILY SSF81660 334 537 2.62E-56 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 Gene3D G3DSA:2.70.150.10 18 230 0.0 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 Gene3D G3DSA:3.40.1110.10 337 540 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 324 649 2.2E-24 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 544 3.0E-41 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 3.0E-41 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 3.0E-41 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 659 671 3.0E-41 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 654 3.0E-41 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 565 3.0E-41 T 14-10-2018 Tph_c00060 86425134abab40d6878c141e542f9470 902 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 55 893 7.6E-216 T 14-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 Pfam PF00689 Cation transporting ATPase, C-terminus 720 891 1.5E-51 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 329 335 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tph_c00060 86425134abab40d6878c141e542f9470 902 Gene3D G3DSA:3.40.50.1000 324 680 0.0 T 14-10-2018 IPR023214 HAD superfamily Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 293 56.193 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 86 5.0E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 293 56.468 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 Gene3D G3DSA:1.10.150.130 3 95 4.9E-26 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 6 292 1.8E-114 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 Gene3D G3DSA:1.10.443.10 107 287 7.4E-65 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 Pfam PF00589 Phage integrase family 108 278 4.9E-50 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tph_c16080 44a6f9b00d7ef0d5c231b4f301951324 293 SUPERFAMILY SSF56349 12 287 4.71E-61 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 PIRSF PIRSF002161 1 178 4.5E-69 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 Gene3D G3DSA:3.30.1440.10 1 178 1.8E-85 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 Pfam PF00673 ribosomal L5P family C-terminus 83 176 1.0E-43 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 178 44.069 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 Pfam PF00281 Ribosomal protein L5 23 79 3.6E-30 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 SUPERFAMILY SSF55282 3 177 1.15E-80 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25730 f496c2c24fe3163bd8ee970df04a8172 178 ProSitePatterns PS00358 Ribosomal protein L5 signature. 56 72 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 SUPERFAMILY SSF53335 23 170 4.07E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 405 410 - T 14-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 Gene3D G3DSA:3.40.50.150 368 528 5.7E-8 T 14-10-2018 Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 Gene3D G3DSA:3.40.50.150 8 196 3.4E-19 T 14-10-2018 Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 SUPERFAMILY SSF53335 389 499 6.24E-10 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 SUPERFAMILY SSF53335 94 435 3.09E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c19400 2946c2d5dd9ee4d5ea1697c90f9c1596 534 Pfam PF01555 DNA methylase 28 158 1.2E-12 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 Pfam PF02607 B12 binding domain 6 76 6.3E-19 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 Gene3D G3DSA:3.40.50.280 80 211 2.9E-51 T 14-10-2018 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 Gene3D G3DSA:1.10.1240.10 2 79 5.5E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 SMART SM01018 1 84 2.0E-29 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 SUPERFAMILY SSF52242 69 210 6.93E-48 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 Pfam PF02310 B12 binding domain 90 200 2.0E-29 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c05860 1611c71bd0d4925f075b97458732599d 212 SUPERFAMILY SSF47644 4 82 2.09E-22 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 Gene3D G3DSA:3.20.20.140 82 329 9.0E-131 T 14-10-2018 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 Hamap MF_01518 Adenine deaminase [ade]. 27 593 37.577 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 SUPERFAMILY SSF51338 21 369 1.1E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 Pfam PF01979 Amidohydrolase family 281 366 4.8E-12 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 Pfam PF01979 Amidohydrolase family 78 164 7.9E-7 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 SUPERFAMILY SSF51556 82 331 2.04E-22 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 Pfam PF13382 Adenine deaminase C-terminal domain 423 590 4.3E-68 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 TIGRFAM TIGR01178 ade: adenine deaminase 27 593 5.1E-165 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Tph_c06090 55475a1892f31f4f7dee6f7702c43013 597 Gene3D G3DSA:2.30.40.10 19 367 9.0E-131 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 106 3.8E-27 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 SUPERFAMILY SSF50104 5 105 2.11E-36 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 6 100 20.331 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 Gene3D G3DSA:2.30.30.30 1 105 1.2E-40 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 6 106 3.2E-39 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 Pfam PF00467 KOW motif 10 41 5.5E-6 T 14-10-2018 IPR005824 KOW Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 ProSitePatterns PS01108 Ribosomal protein L24 signature. 11 28 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25740 dc3a552c9627ec33200144e24f7beb73 108 SMART SM00739 7 34 1.9E-5 T 14-10-2018 IPR005824 KOW Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 PIRSF PIRSF010376 8 295 1.6E-78 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 11 268 3.2E-68 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 Gene3D G3DSA:3.30.70.890 166 293 4.1E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 Gene3D G3DSA:3.30.230.10 1 162 3.2E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 Pfam PF00288 GHMP kinases N terminal domain 91 148 4.9E-9 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 Pfam PF08544 GHMP kinases C terminal 201 276 1.9E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 SUPERFAMILY SSF55060 167 284 6.47E-25 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 10 284 32.449 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Tph_c28380 0e28126c1144a12a6eb7f436cc4cd7b8 298 SUPERFAMILY SSF54211 11 160 4.63E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 SUPERFAMILY SSF53790 7 254 4.71E-70 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 Gene3D G3DSA:3.40.1010.10 4 117 1.5E-31 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 215 5.2E-48 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 Gene3D G3DSA:3.30.950.10 118 237 1.5E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 254 7.6E-95 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 Tph_c05250 a6519f395c3fcdd35e516bcfa0354cad 265 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 423 5.0E-169 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 132 158 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 9.7E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 Gene3D G3DSA:3.40.50.1980 27 228 9.9E-130 T 14-10-2018 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 PIRSF PIRSF000099 1 427 2.1E-177 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 424 43.612 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 Pfam PF00815 Histidinol dehydrogenase 20 424 9.2E-175 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 Gene3D G3DSA:3.40.50.1980 230 346 9.9E-130 T 14-10-2018 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 Tph_c08830 0e70ca349e3f7bc4f9f73c5d62d42d84 430 SUPERFAMILY SSF53720 23 424 1.26E-89 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 SUPERFAMILY SSF50621 279 437 8.79E-52 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 46 301 1.0E-65 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 67 85 1.7E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 291 310 1.7E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 87 99 1.7E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 202 215 1.7E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 392 405 1.7E-19 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 302 392 1.4E-14 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 13 433 1.4E-147 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 Gene3D G3DSA:3.20.20.10 42 301 1.8E-160 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 Gene3D G3DSA:2.40.37.10 21 431 1.8E-160 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 SUPERFAMILY SSF51419 34 303 6.69E-82 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 85 102 7.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 174 183 7.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 320 338 7.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 402 424 7.4E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 23 435 40.19 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c15940 8d95b63c0c32db0f3644f3667f3833f2 441 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 67 85 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Tph_c19620 200aedffafc815204502fb94143014cc 385 Gene3D G3DSA:3.30.559.10 148 383 1.4E-87 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Tph_c19620 200aedffafc815204502fb94143014cc 385 SUPERFAMILY SSF47005 104 147 2.09E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Tph_c19620 200aedffafc815204502fb94143014cc 385 Gene3D G3DSA:2.40.50.100 1 98 5.6E-28 T 14-10-2018 Tph_c19620 200aedffafc815204502fb94143014cc 385 Pfam PF02817 e3 binding domain 108 143 1.3E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Tph_c19620 200aedffafc815204502fb94143014cc 385 SUPERFAMILY SSF51230 2 93 1.44E-24 T 14-10-2018 IPR011053 Single hybrid motif Tph_c19620 200aedffafc815204502fb94143014cc 385 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 160 384 1.2E-84 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Tph_c19620 200aedffafc815204502fb94143014cc 385 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tph_c19620 200aedffafc815204502fb94143014cc 385 Gene3D G3DSA:4.10.320.10 99 147 2.5E-19 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Tph_c19620 200aedffafc815204502fb94143014cc 385 SUPERFAMILY SSF52777 159 384 3.91E-81 T 14-10-2018 Tph_c19620 200aedffafc815204502fb94143014cc 385 Pfam PF00364 Biotin-requiring enzyme 4 76 4.7E-18 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.1E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 1.8E-66 T 14-10-2018 Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 SUPERFAMILY SSF51735 5 248 6.63E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 Gene3D G3DSA:3.40.50.720 6 248 3.8E-85 T 14-10-2018 Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 195 0.0061 T 14-10-2018 Tph_c26430 a6ab75b686e47af169ac2557fcf1e197 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tph_c15450 b8f21b9e7b11838e84f822db5cbc9368 480 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 5 447 2.1E-156 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tph_c15450 b8f21b9e7b11838e84f822db5cbc9368 480 SUPERFAMILY SSF50475 2 316 5.1E-123 T 14-10-2018 Tph_c15450 b8f21b9e7b11838e84f822db5cbc9368 480 SUPERFAMILY SSF143968 317 480 3.27E-63 T 14-10-2018 Tph_c15450 b8f21b9e7b11838e84f822db5cbc9368 480 Gene3D G3DSA:3.40.1670.10 331 446 6.0E-42 T 14-10-2018 Tph_c15450 b8f21b9e7b11838e84f822db5cbc9368 480 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 9 422 2.8E-177 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tph_c15450 b8f21b9e7b11838e84f822db5cbc9368 480 TIGRFAM TIGR03701 mena_SCO4490: menaquinone biosynthesis decarboxylase, SCO4490 family 7 439 3.7E-204 T 14-10-2018 IPR022390 4-hydroxybenzoate decarboxylase subunit C GO:0016831 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 ProSitePatterns PS00938 Initiation factor 3 signature. 125 138 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 Gene3D G3DSA:3.30.110.10 144 238 4.7E-36 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 Gene3D G3DSA:3.10.20.80 68 143 1.0E-33 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 SUPERFAMILY SSF55200 150 235 3.01E-31 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 150 234 3.4E-36 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 74 143 1.6E-31 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 SUPERFAMILY SSF54364 72 145 7.32E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 68 237 31.371 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tph_c13310 e443e634be46b81e7ae621f81d24ed45 243 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 74 235 1.7E-65 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Tph_c12640 a057716b54f19860161b86098005fb90 375 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 372 34.316 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12640 a057716b54f19860161b86098005fb90 375 SUPERFAMILY SSF53756 1 370 4.94E-104 T 14-10-2018 Tph_c12640 a057716b54f19860161b86098005fb90 375 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 353 4.0E-36 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Tph_c12640 a057716b54f19860161b86098005fb90 375 Gene3D G3DSA:3.40.50.2000 4 361 1.5E-111 T 14-10-2018 Tph_c12640 a057716b54f19860161b86098005fb90 375 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 368 1.1E-88 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12640 a057716b54f19860161b86098005fb90 375 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 1.4E-38 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12640 a057716b54f19860161b86098005fb90 375 Gene3D G3DSA:3.40.50.2000 165 356 1.5E-111 T 14-10-2018 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PIRSF PIRSF000513 3 267 2.0E-86 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 9 258 1.9E-81 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 61 69 4.1E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 118 132 4.1E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 87 104 4.1E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 30 51 4.1E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 162 179 4.1E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 17 24 4.1E-33 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 Pfam PF02110 Hydroxyethylthiazole kinase family 9 256 3.5E-77 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 11 259 31.511 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 SUPERFAMILY SSF53613 5 265 2.49E-62 T 14-10-2018 IPR029056 Ribokinase-like Tph_c17790 126fe81ed71cfed8ad090f0a1c8de183 267 Gene3D G3DSA:3.40.1190.20 1 267 1.5E-89 T 14-10-2018 IPR029056 Ribokinase-like Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 365 3.3E-72 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 SUPERFAMILY SSF47917 373 500 9.94E-50 T 14-10-2018 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 502 51.164 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Gene3D G3DSA:3.40.50.300 94 372 8.0E-125 T 14-10-2018 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Gene3D G3DSA:1.20.150.20 373 502 9.2E-58 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 501 1.5E-254 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 PIRSF PIRSF039088 1 504 1.1E-260 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 3.6E-17 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Gene3D G3DSA:2.40.30.20 1 93 7.6E-38 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 372 497 6.5E-53 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 SUPERFAMILY SSF50615 10 94 2.15E-30 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27390 6209c475e9659403daf5828e2793d27c 511 SUPERFAMILY SSF52540 96 371 3.84E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27390 6209c475e9659403daf5828e2793d27c 511 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c05980 bd1326a1f201691b3703944a31152127 280 PIRSF PIRSF038471 5 278 2.3E-61 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tph_c05980 bd1326a1f201691b3703944a31152127 280 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 58 266 5.4E-41 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tph_c05980 bd1326a1f201691b3703944a31152127 280 Gene3D G3DSA:2.40.10.340 117 262 6.9E-42 T 14-10-2018 Tph_c05980 bd1326a1f201691b3703944a31152127 280 Gene3D G3DSA:2.40.10.350 176 252 6.9E-42 T 14-10-2018 Tph_c05980 bd1326a1f201691b3703944a31152127 280 Pfam PF04085 rod shape-determining protein MreC 119 264 3.7E-39 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 92 140 1.3E-14 T 14-10-2018 IPR004176 Clp, N-terminal Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.3E-20 T 14-10-2018 IPR004176 Clp, N-terminal Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 576 594 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Gene3D G3DSA:3.40.50.300 494 719 5.8E-91 T 14-10-2018 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Pfam PF02151 UvrB/uvrC motif 422 456 7.7E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 SMART SM00382 205 350 5.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 SMART SM00382 542 690 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 SMART SM01086 721 810 9.4E-40 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Gene3D G3DSA:4.10.860.10 414 472 3.3E-49 T 14-10-2018 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 210 340 2.3E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 620 638 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 591 609 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 564 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 653 667 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 721 800 4.3E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 SUPERFAMILY SSF81923 5 144 1.73E-31 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Pfam PF07724 AAA domain (Cdc48 subfamily) 541 715 6.7E-57 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 SUPERFAMILY SSF52540 491 810 6.92E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 SUPERFAMILY SSF52540 166 476 5.33E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Gene3D G3DSA:1.10.8.60 721 817 5.0E-30 T 14-10-2018 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Gene3D G3DSA:3.40.50.300 156 348 1.5E-76 T 14-10-2018 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Gene3D G3DSA:1.10.1780.10 1 146 3.4E-53 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 Gene3D G3DSA:1.10.8.60 351 486 3.3E-49 T 14-10-2018 Tph_c03720 709f803aa653c6afb830c7e3890a6d21 820 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 300 312 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Tph_c26280 f5fa806bf671d56675e7892438896c47 668 Pfam PF00361 Proton-conducting membrane transporter 130 415 1.9E-55 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26280 f5fa806bf671d56675e7892438896c47 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 5.8E-9 T 14-10-2018 Tph_c26280 f5fa806bf671d56675e7892438896c47 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 216 237 5.8E-9 T 14-10-2018 Tph_c26280 f5fa806bf671d56675e7892438896c47 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 433 452 5.8E-9 T 14-10-2018 Tph_c26280 f5fa806bf671d56675e7892438896c47 668 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 5.8E-9 T 14-10-2018 Tph_c28900 7590a30bb34b5faee78359dfc1bca11c 368 SUPERFAMILY SSF52922 251 363 1.44E-23 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c28900 7590a30bb34b5faee78359dfc1bca11c 368 Gene3D G3DSA:3.40.50.920 249 362 1.3E-19 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c28900 7590a30bb34b5faee78359dfc1bca11c 368 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 259 341 6.1E-17 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Tph_c28900 7590a30bb34b5faee78359dfc1bca11c 368 SUPERFAMILY SSF52518 10 246 3.93E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c28900 7590a30bb34b5faee78359dfc1bca11c 368 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 23 250 4.2E-44 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tph_c28900 7590a30bb34b5faee78359dfc1bca11c 368 Gene3D G3DSA:3.40.50.970 3 196 7.7E-57 T 14-10-2018 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SUPERFAMILY SSF46955 409 481 8.97E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Gene3D G3DSA:3.30.56.10 407 481 4.2E-24 T 14-10-2018 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 805 4.4E-254 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Gene3D G3DSA:3.50.40.10 202 401 9.4E-87 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SMART SM00874 408 477 2.1E-27 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SUPERFAMILY SSF55681 473 699 5.47E-50 T 14-10-2018 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Pfam PF03484 tRNA synthetase B5 domain 411 477 1.1E-18 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SUPERFAMILY SSF56037 205 399 2.62E-74 T 14-10-2018 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Pfam PF01588 Putative tRNA binding domain 46 148 1.1E-19 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SUPERFAMILY SSF54991 708 805 1.28E-29 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SMART SM00896 712 805 2.8E-41 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Gene3D G3DSA:3.30.56.10 4 184 9.1E-68 T 14-10-2018 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 799 44.197 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SUPERFAMILY SSF50249 42 195 1.14E-42 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 SMART SM00873 218 391 1.3E-93 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Gene3D G3DSA:3.30.70.380 713 805 7.4E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Pfam PF03147 Ferredoxin-fold anticodon binding domain 712 805 1.5E-27 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Pfam PF03483 B3/4 domain 219 389 6.3E-70 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Gene3D G3DSA:2.40.50.140 39 157 9.1E-68 T 14-10-2018 Tph_c13360 e147770e6ae7ac176ef2f99926bdc970 805 Gene3D G3DSA:3.30.930.10 494 698 2.4E-63 T 14-10-2018 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Gene3D G3DSA:1.10.287.560 291 350 1.7E-20 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SUPERFAMILY SSF50341 537 670 6.15E-36 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Pfam PF01584 CheW-like domain 542 670 4.4E-27 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SMART SM01231 290 350 1.4E-18 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Pfam PF01627 Hpt domain 6 97 4.6E-21 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SMART SM00260 530 670 3.5E-40 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Gene3D G3DSA:1.20.120.160 1 139 7.0E-41 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SUPERFAMILY SSF47384 291 351 1.02E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 1.4E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SUPERFAMILY SSF47226 4 123 2.62E-32 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Pfam PF07194 P2 response regulator binding domain 165 239 4.3E-25 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SMART SM00387 395 538 2.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SUPERFAMILY SSF55874 352 536 1.23E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 399 537 1.2E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Gene3D G3DSA:3.30.565.10 351 537 8.5E-57 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SMART SM00073 3 100 7.2E-34 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Gene3D G3DSA:3.30.70.1110 162 245 2.3E-24 T 14-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 SUPERFAMILY SSF55052 165 242 1.49E-20 T 14-10-2018 IPR035891 CheY-binding domain of CheA Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Gene3D G3DSA:2.30.30.40 538 666 2.3E-42 T 14-10-2018 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 291 350 1.0E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tph_c11070 47b78c4dd7d0c73c3e6793ab3d1dc1f3 670 Gene3D G3DSA:2.40.50.180 561 625 2.3E-42 T 14-10-2018 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 Pfam PF01938 TRAM domain 393 450 9.5E-9 T 14-10-2018 IPR002792 TRAM domain Tph_c21080 270504e45efb9511ecc40389ad22133b 461 Pfam PF04055 Radical SAM superfamily 173 340 3.5E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 SUPERFAMILY SSF102114 160 423 2.75E-58 T 14-10-2018 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 Pfam PF00919 Uncharacterized protein family UPF0004 17 112 1.5E-24 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 Gene3D G3DSA:3.40.50.12160 16 143 9.6E-24 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tph_c21080 270504e45efb9511ecc40389ad22133b 461 Gene3D G3DSA:3.80.30.20 162 396 4.3E-85 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c21080 270504e45efb9511ecc40389ad22133b 461 SMART SM00729 164 382 2.7E-50 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 20 444 2.0E-122 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 17 451 7.2E-130 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tph_c21080 270504e45efb9511ecc40389ad22133b 461 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 168 188 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tph_c20370 540f6899df3dfabcf05ced31a36243c5 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 267 278 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c20370 540f6899df3dfabcf05ced31a36243c5 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 306 317 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c20370 540f6899df3dfabcf05ced31a36243c5 326 Pfam PF00037 4Fe-4S binding domain 299 322 4.9E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c20370 540f6899df3dfabcf05ced31a36243c5 326 Pfam PF00037 4Fe-4S binding domain 261 282 4.1E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c20370 540f6899df3dfabcf05ced31a36243c5 326 SUPERFAMILY SSF54862 256 324 6.13E-18 T 14-10-2018 Tph_c20370 540f6899df3dfabcf05ced31a36243c5 326 Gene3D G3DSA:3.30.70.20 259 325 4.8E-14 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 SUPERFAMILY SSF56719 403 636 3.14E-93 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 13 642 90.574 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 8.3E-31 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 44 182 4.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Gene3D G3DSA:3.30.565.10 13 228 1.6E-86 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Pfam PF01751 Toprim domain 428 539 1.9E-18 T 14-10-2018 IPR006171 TOPRIM domain Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 SUPERFAMILY SSF55874 16 224 1.7E-67 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Pfam PF00204 DNA gyrase B 230 399 4.7E-65 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 SMART SM00387 41 185 8.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 80 93 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 123 137 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 513 530 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 574 590 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 429 443 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 277 290 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 533 545 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 495 511 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR00418 DNA topoisomerase II family signature 45 60 9.0E-73 T 14-10-2018 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 SUPERFAMILY SSF54211 230 400 4.17E-61 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Gene3D G3DSA:3.40.50.670 408 642 4.7E-112 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 369 383 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 229 251 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 321 337 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 16 26 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 205 218 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 479 488 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 595 607 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 611 627 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 190 205 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 PRINTS PR01159 DNA gyrase subunit B signature 383 403 1.0E-67 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 Gene3D G3DSA:3.30.230.10 229 407 5.9E-76 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 16 642 8.2E-303 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tph_c00050 dfd8d1dfad049fe6ef2dfbe7f825883a 642 SMART SM00433 45 635 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 309 5.3E-35 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 326 38.224 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 Pfam PF04055 Radical SAM superfamily 14 175 5.1E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 Gene3D G3DSA:3.20.20.70 1 326 2.2E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 Pfam PF13353 4Fe-4S single cluster domain 17 124 1.6E-6 T 14-10-2018 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 SMART SM00729 10 214 3.6E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 326 6.4E-111 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01580 435f9ae135de78eb0dcfa87d11fe1c6a 326 SUPERFAMILY SSF102114 3 279 1.06E-74 T 14-10-2018 Tph_c15620 d7cd78028f81001897572b63342e744b 321 Pfam PF11385 Protein of unknown function (DUF3189) 7 150 1.5E-49 T 14-10-2018 IPR021525 Protein of unknown function DUF3189 Tph_c15620 d7cd78028f81001897572b63342e744b 321 Pfam PF11385 Protein of unknown function (DUF3189) 175 274 3.3E-5 T 14-10-2018 IPR021525 Protein of unknown function DUF3189 Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 135 7.2E-13 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 Gene3D G3DSA:3.30.1330.10 1 143 5.6E-27 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 SUPERFAMILY SSF56042 147 316 4.34E-35 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 Gene3D G3DSA:3.90.650.10 147 332 5.5E-44 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 SUPERFAMILY SSF55326 24 141 5.41E-24 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 Pfam PF02769 AIR synthase related protein, C-terminal domain 153 308 8.2E-21 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tph_c17890 e21a05a91a1b144075ce560b7efc93f7 343 PIRSF PIRSF005644 1 334 1.1E-76 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 Gene3D G3DSA:1.20.1720.10 14 242 3.9E-44 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 Pfam PF07690 Major Facilitator Superfamily 20 405 7.4E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 Gene3D G3DSA:1.20.1250.20 253 459 3.4E-26 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 3.8E-8 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 3.8E-8 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 3.8E-8 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 162 186 3.8E-8 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 76 98 3.8E-8 T 14-10-2018 Tph_c12280 b69de6902a686fd80d11f442b3384f05 476 SUPERFAMILY SSF103473 10 460 1.44E-68 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c22610 9ebf77761bc4f089ce3348164fb3ca09 315 SUPERFAMILY SSF102114 26 231 6.15E-22 T 14-10-2018 Tph_c22610 9ebf77761bc4f089ce3348164fb3ca09 315 Gene3D G3DSA:3.20.20.70 25 252 6.7E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c22610 9ebf77761bc4f089ce3348164fb3ca09 315 SUPERFAMILY SSF46785 260 315 2.98E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c22610 9ebf77761bc4f089ce3348164fb3ca09 315 Pfam PF04055 Radical SAM superfamily 27 183 4.3E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c22610 9ebf77761bc4f089ce3348164fb3ca09 315 Gene3D G3DSA:1.10.10.10 255 315 8.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c22430 c373b749ba03b690b42f89a906d99500 156 Pfam PF01475 Ferric uptake regulator family 13 136 1.1E-28 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Tph_c22430 c373b749ba03b690b42f89a906d99500 156 SUPERFAMILY SSF46785 5 140 2.2E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c22430 c373b749ba03b690b42f89a906d99500 156 Gene3D G3DSA:1.10.10.10 2 88 5.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c22430 c373b749ba03b690b42f89a906d99500 156 Gene3D G3DSA:3.30.1490.190 90 143 8.4E-14 T 14-10-2018 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Hamap MF_00303 Trigger factor [tig]. 1 432 20.238 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 SUPERFAMILY SSF54534 134 249 2.36E-20 T 14-10-2018 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Gene3D G3DSA:1.10.3120.10 115 427 2.3E-70 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 SUPERFAMILY SSF102735 1 127 4.45E-32 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 PIRSF PIRSF003095 1 447 9.3E-105 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 SUPERFAMILY SSF109998 251 437 1.28E-39 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Gene3D G3DSA:3.30.70.1050 3 114 4.3E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 424 1.3E-33 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 TIGRFAM TIGR00115 tig: trigger factor 12 423 2.8E-110 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Gene3D G3DSA:3.10.50.40 152 249 2.3E-70 T 14-10-2018 Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 240 6.3E-5 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain Tph_c04630 dc1bfa1907640e1e2439107a9de5ba3e 467 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.0E-36 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SUPERFAMILY SSF158472 68 118 1.57E-8 T 14-10-2018 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SMART SM00304 68 120 6.4E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SMART SM00388 242 309 2.2E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 3.6E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 3.6E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 3.6E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 3.6E-21 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Pfam PF00672 HAMP domain 68 116 4.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Gene3D G3DSA:1.10.287.130 234 312 6.6E-26 T 14-10-2018 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Pfam PF00989 PAS fold 128 233 1.9E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 465 2.8E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SMART SM00091 127 194 6.1E-6 T 14-10-2018 IPR000014 PAS domain Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SMART SM00387 355 467 1.2E-45 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 123 241 1.7E-12 T 14-10-2018 IPR000014 PAS domain Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Gene3D G3DSA:3.30.565.10 314 473 7.2E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Gene3D G3DSA:3.30.450.20 122 233 1.9E-19 T 14-10-2018 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SUPERFAMILY SSF55785 116 234 2.79E-16 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 308 2.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SUPERFAMILY SSF55874 298 465 1.96E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 SUPERFAMILY SSF47384 228 309 3.14E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c04850 ab0a51e41084992ac16aa8c396997677 480 Gene3D G3DSA:1.20.1480.50 39 121 5.0E-13 T 14-10-2018 Tph_c08780 252f1ec01f118a47171333fda919068a 378 Pfam PF03845 Spore germination protein 7 315 9.1E-55 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Tph_c08780 252f1ec01f118a47171333fda919068a 378 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 362 3.9E-66 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Tph_c06410 4b7b6fab13ba7814bfb8db1d4488ce68 217 Hamap MF_02088 Probable queuosine precursor transporter. 2 203 16.562 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Tph_c06410 4b7b6fab13ba7814bfb8db1d4488ce68 217 Pfam PF02592 Putative vitamin uptake transporter 34 194 3.0E-44 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Tph_c06410 4b7b6fab13ba7814bfb8db1d4488ce68 217 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 7 198 1.6E-37 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 Tph_c06550 21a87e4306a52b9440a2b5db2a87a0c2 379 Pfam PF01551 Peptidase family M23 281 375 2.9E-37 T 14-10-2018 IPR016047 Peptidase M23 Tph_c06550 21a87e4306a52b9440a2b5db2a87a0c2 379 SUPERFAMILY SSF51261 216 379 2.88E-64 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c06550 21a87e4306a52b9440a2b5db2a87a0c2 379 Gene3D G3DSA:2.70.70.10 225 379 8.8E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 Gene3D G3DSA:1.10.10.10 110 163 7.9E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 PRINTS PR00046 Major sigma-70 factor signature 65 78 3.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 PRINTS PR00046 Major sigma-70 factor signature 241 252 3.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 PRINTS PR00046 Major sigma-70 factor signature 209 221 3.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 PRINTS PR00046 Major sigma-70 factor signature 226 241 3.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 PRINTS PR00046 Major sigma-70 factor signature 89 97 3.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 PIRSF PIRSF000770 4 256 3.8E-37 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 255 1.3E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 65 78 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 226 252 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 Pfam PF04542 Sigma-70 region 2 41 109 2.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 SUPERFAMILY SSF88659 174 256 3.92E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 35 255 1.6E-86 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 3 256 4.3E-152 T 14-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 Pfam PF04545 Sigma-70, region 4 205 254 1.4E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 Gene3D G3DSA:1.10.10.10 187 256 1.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 Gene3D G3DSA:1.10.601.10 10 109 1.5E-28 T 14-10-2018 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 26 256 8.3E-97 T 14-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 Pfam PF04539 Sigma-70 region 3 125 174 3.0E-8 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 SUPERFAMILY SSF88659 113 189 3.14E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c12730 3587606e5585fa02a0c97421ee69b7bb 256 SUPERFAMILY SSF88946 5 109 3.92E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c20820 03e2bf3656e083173e800d6cf5b70400 115 Gene3D G3DSA:2.30.30.110 4 115 5.1E-43 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Tph_c20820 03e2bf3656e083173e800d6cf5b70400 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 11 113 2.5E-25 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c20820 03e2bf3656e083173e800d6cf5b70400 115 SUPERFAMILY SSF50118 7 114 1.09E-33 T 14-10-2018 Tph_c20820 03e2bf3656e083173e800d6cf5b70400 115 PIRSF PIRSF033490 8 115 1.2E-21 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 SMART SM00278 108 127 0.028 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 SMART SM00278 73 92 69.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Gene3D G3DSA:2.40.50.140 1 65 3.1E-26 T 14-10-2018 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 SUPERFAMILY SSF46929 148 197 3.66E-10 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 SUPERFAMILY SSF47781 66 133 6.99E-18 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Gene3D G3DSA:1.10.8.10 142 199 3.6E-10 T 14-10-2018 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Pfam PF01330 RuvA N terminal domain 1 62 9.5E-22 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Gene3D G3DSA:1.10.150.20 67 138 6.6E-19 T 14-10-2018 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Pfam PF07499 RuvA, C-terminal domain 149 195 1.0E-10 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 30.227 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 Pfam PF14520 Helix-hairpin-helix domain 72 129 2.4E-12 T 14-10-2018 Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 SUPERFAMILY SSF50249 1 63 9.71E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c12300 7cce12cd578ed913cbe94e1679b286af 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 189 3.0E-46 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 SMART SM00283 148 423 3.2E-60 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 SUPERFAMILY SSF58104 135 420 1.44E-61 T 14-10-2018 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 Gene3D G3DSA:1.10.287.950 118 423 7.5E-61 T 14-10-2018 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 Pfam PF02743 Cache domain 394 549 4.8E-12 T 14-10-2018 IPR033479 Double Cache domain 1 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 Gene3D G3DSA:3.30.450.20 454 549 1.7E-19 T 14-10-2018 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 225 376 3.7E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c02930 a13a55e52e23fc8186130ceace1c626e 554 SUPERFAMILY SSF103190 496 549 2.04E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 SUPERFAMILY SSF53300 456 617 1.0E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 Gene3D G3DSA:3.40.50.300 1 166 3.3E-48 T 14-10-2018 Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 Gene3D G3DSA:1.10.8.80 211 290 2.1E-16 T 14-10-2018 Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 SMART SM00382 26 169 6.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 SMART SM00327 453 630 2.1E-23 T 14-10-2018 IPR002035 von Willebrand factor, type A Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 Pfam PF13519 von Willebrand factor type A domain 456 562 4.1E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 Pfam PF07728 AAA domain (dynein-related subfamily) 29 159 1.7E-10 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 SUPERFAMILY SSF52540 3 285 7.57E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03400 89cd4f4a548297e7b8cbc37ca78c7c28 637 Gene3D G3DSA:3.40.50.410 455 631 4.3E-23 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Gene3D G3DSA:2.30.42.20 391 575 2.4E-53 T 14-10-2018 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 573 25.123 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 SUPERFAMILY SSF55874 4 214 8.77E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 SUPERFAMILY SSF118116 387 575 4.05E-44 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 326 1.2E-33 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 307 6.6E-91 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 128 9.6E-12 T 14-10-2018 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Gene3D G3DSA:3.30.230.10 214 326 6.2E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Pfam PF08676 MutL C terminal dimerisation domain 390 533 1.2E-32 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 SMART SM01340 209 327 4.7E-44 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 SUPERFAMILY SSF54211 191 327 4.93E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Gene3D G3DSA:3.30.565.10 3 204 2.2E-59 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 SMART SM00853 390 533 2.3E-35 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 Tph_c13860 20d2f1477e011f00c598fa3f18a20cab 575 Gene3D G3DSA:3.30.1370.100 432 526 2.4E-53 T 14-10-2018 Tph_c12750 2dcca242a5fbe77048168905d93f2542 85 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 75 2.7E-28 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH Tph_c12750 2dcca242a5fbe77048168905d93f2542 85 Pfam PF05239 PRC-barrel domain 2 77 2.3E-14 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c12750 2dcca242a5fbe77048168905d93f2542 85 Gene3D G3DSA:2.30.30.240 3 76 4.7E-12 T 14-10-2018 Tph_c12750 2dcca242a5fbe77048168905d93f2542 85 SUPERFAMILY SSF50346 2 74 5.49E-15 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 SUPERFAMILY SSF88946 12 113 2.51E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 Pfam PF08281 Sigma-70, region 4 141 192 3.1E-20 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 Gene3D G3DSA:1.10.10.10 136 197 4.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 56 87 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 Pfam PF04542 Sigma-70 region 2 38 100 5.1E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 SUPERFAMILY SSF88659 134 195 1.4E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 Gene3D G3DSA:1.10.1740.10 10 122 8.5E-29 T 14-10-2018 Tph_c28140 a3447c07560d46811a22b8bcaf9ac79d 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 195 1.1E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c28840 30b0e4e4bc145e88e4e1d5cf25953979 480 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 95 463 5.1E-100 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tph_c28840 30b0e4e4bc145e88e4e1d5cf25953979 480 PIRSF PIRSF006247 1 480 7.9E-176 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tph_c28840 30b0e4e4bc145e88e4e1d5cf25953979 480 Pfam PF02386 Cation transport protein 300 473 1.4E-34 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tph_c28840 30b0e4e4bc145e88e4e1d5cf25953979 480 Pfam PF02386 Cation transport protein 62 276 1.0E-39 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 Gene3D G3DSA:3.30.457.10 66 134 5.8E-17 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 Gene3D G3DSA:3.20.20.80 174 449 2.1E-75 T 14-10-2018 Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 SUPERFAMILY SSF55383 68 139 4.58E-20 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 Gene3D G3DSA:3.10.50.10 361 415 2.1E-75 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 Pfam PF00704 Glycosyl hydrolases family 18 221 443 2.4E-27 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 SUPERFAMILY SSF51445 154 450 3.31E-41 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 SMART SM00636 153 444 9.3E-20 T 14-10-2018 IPR011583 Chitinase II GO:0008061 Tph_c24640 0a324d5bab11bd722797b5c5ef0953e7 456 Pfam PF07833 Copper amine oxidase N-terminal domain 52 146 7.1E-26 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c02550 e9511557fb826d829a0a20b06b1d14c9 166 Pfam PF12728 Helix-turn-helix domain 69 112 1.5E-15 T 14-10-2018 Tph_c02550 e9511557fb826d829a0a20b06b1d14c9 166 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 69 110 8.1E-15 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Tph_c02550 e9511557fb826d829a0a20b06b1d14c9 166 Gene3D G3DSA:1.10.1660.10 64 116 1.1E-9 T 14-10-2018 Tph_c02550 e9511557fb826d829a0a20b06b1d14c9 166 SUPERFAMILY SSF46955 68 114 1.78E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c02550 e9511557fb826d829a0a20b06b1d14c9 166 Gene3D G3DSA:1.20.58.720 1 59 9.6E-8 T 14-10-2018 Tph_c02550 e9511557fb826d829a0a20b06b1d14c9 166 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 47 5.9E-13 T 14-10-2018 IPR022453 Zinc finger, MqsA-type Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 SUPERFAMILY SSF46785 258 328 3.26E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 Gene3D G3DSA:3.40.50.300 21 182 2.4E-41 T 14-10-2018 Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 328 3.0E-26 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 SMART SM00382 52 183 1.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 SUPERFAMILY SSF52540 21 252 2.31E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 Gene3D G3DSA:1.10.10.10 258 335 3.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 236 4.9E-113 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 5.3E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 349 164.989 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 4.1E-141 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Tph_c12310 e8d6f9322c1d1dad12fc488134d54c75 349 Gene3D G3DSA:1.10.8.60 183 257 6.7E-29 T 14-10-2018 Tph_c01330 25bbc54fb5a9a9e9794c4e899c3a68d6 192 SMART SM00903 9 164 8.4E-24 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c01330 25bbc54fb5a9a9e9794c4e899c3a68d6 192 Pfam PF01613 Flavin reductase like domain 12 150 1.5E-27 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c01330 25bbc54fb5a9a9e9794c4e899c3a68d6 192 Gene3D G3DSA:2.30.110.10 1 190 1.1E-62 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tph_c01330 25bbc54fb5a9a9e9794c4e899c3a68d6 192 SUPERFAMILY SSF50475 8 176 2.89E-47 T 14-10-2018 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 SUPERFAMILY SSF53223 1 121 2.4E-35 T 14-10-2018 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 Gene3D G3DSA:3.40.50.10860 8 279 1.1E-98 T 14-10-2018 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 2.4E-37 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 SUPERFAMILY SSF51735 123 284 2.37E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 Gene3D G3DSA:3.40.50.720 6 261 1.1E-98 T 14-10-2018 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 284 1.0E-56 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 258 276 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 241 257 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.3E-65 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16320 80857a0e3cf6c2c72225b58a3b3a1119 289 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 285 33.368 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Gene3D G3DSA:3.40.50.300 277 627 2.3E-127 T 14-10-2018 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Pfam PF13361 UvrD-like helicase C-terminal domain 275 424 5.2E-38 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Gene3D G3DSA:1.10.486.10 380 542 2.3E-127 T 14-10-2018 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Pfam PF13361 UvrD-like helicase C-terminal domain 499 610 2.7E-31 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Gene3D G3DSA:3.40.50.300 7 270 4.4E-104 T 14-10-2018 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Gene3D G3DSA:1.10.10.160 107 186 4.4E-104 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 269 1.8E-79 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 SUPERFAMILY SSF52540 5 636 1.13E-190 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c08890 439af47ddd2156fc40975a7246d2b4d1 738 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 5 736 1.6E-289 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 Pfam PF04542 Sigma-70 region 2 36 102 9.5E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 SUPERFAMILY SSF88659 123 211 1.29E-8 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 Pfam PF08281 Sigma-70, region 4 170 205 6.2E-7 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 SUPERFAMILY SSF88946 17 102 1.16E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 13 210 4.5E-113 T 14-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 PIRSF PIRSF002939 1 214 2.2E-110 T 14-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 209 1.9E-24 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c04970 6b0961165ff76120a258c31c3dd31d23 214 Gene3D G3DSA:1.10.10.10 55 214 7.9E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c26950 bed47ced8f931d244401c1f48f690418 310 SUPERFAMILY SSF53067 18 139 3.06E-36 T 14-10-2018 Tph_c26950 bed47ced8f931d244401c1f48f690418 310 Pfam PF02541 Ppx/GppA phosphatase family 32 308 2.1E-50 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Tph_c26950 bed47ced8f931d244401c1f48f690418 310 Gene3D G3DSA:3.30.420.40 11 139 2.0E-42 T 14-10-2018 Tph_c26950 bed47ced8f931d244401c1f48f690418 310 SUPERFAMILY SSF53067 144 308 3.42E-35 T 14-10-2018 Tph_c26950 bed47ced8f931d244401c1f48f690418 310 Gene3D G3DSA:3.30.420.150 142 309 2.5E-43 T 14-10-2018 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 TIGRFAM TIGR01441 GPR: GPR endopeptidase 15 259 8.9E-79 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 15 305 1.0E-75 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 Pfam PF03418 Germination protease 271 318 1.5E-7 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 Pfam PF03418 Germination protease 30 257 2.5E-76 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 Gene3D G3DSA:3.40.50.1450 5 323 2.0E-109 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 PIRSF PIRSF019549 8 268 1.4E-90 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 PIRSF PIRSF019549 267 323 3.8E-10 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 SUPERFAMILY SSF53163 12 320 3.4E-99 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c10010 da42b3f29c284e43fadf9a3aaa975931 323 Hamap MF_00626 Germination protease [gpr]. 1 323 117.814 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 SUPERFAMILY SSF52540 150 397 8.37E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 194 325 1.6E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 Pfam PF01434 Peptidase family M41 387 595 5.6E-84 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 SMART SM00382 190 329 3.5E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 Gene3D G3DSA:3.40.50.300 145 327 9.9E-73 T 14-10-2018 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 SUPERFAMILY SSF140990 408 598 1.96E-74 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 Gene3D G3DSA:1.10.8.60 328 405 1.0E-31 T 14-10-2018 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 106 597 4.1E-242 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 Gene3D G3DSA:1.20.58.760 408 600 3.9E-77 T 14-10-2018 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 599 38.732 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Tph_c26810 58c7fbb03657b9c513d295f97b416683 600 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.1E-61 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 SUPERFAMILY SSF54686 1 136 9.03E-58 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 Gene3D G3DSA:3.90.1170.10 1 143 6.9E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 40.51 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25780 e7728647f1caa33034834c4ec8429e9e 145 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.1E-51 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Tph_c20160 dbbb9825b9ccd7642b29af8da51176df 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 209 1.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c20160 dbbb9825b9ccd7642b29af8da51176df 215 Gene3D G3DSA:1.10.3720.10 21 209 8.1E-31 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c20160 dbbb9825b9ccd7642b29af8da51176df 215 SUPERFAMILY SSF161098 18 200 3.79E-37 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 Pfam PF12327 FtsZ family, C-terminal domain 219 313 7.9E-40 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 336 39.839 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 SMART SM00864 10 202 1.5E-113 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 SUPERFAMILY SSF55307 201 315 1.35E-47 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 Gene3D G3DSA:3.30.1330.20 218 327 2.0E-44 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 SUPERFAMILY SSF52490 9 205 8.77E-71 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 170 1.3E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 324 7.2E-137 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 PRINTS PR00423 Cell division protein FtsZ signature 123 144 7.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 PRINTS PR00423 Cell division protein FtsZ signature 209 230 7.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 PRINTS PR00423 Cell division protein FtsZ signature 186 208 7.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 PRINTS PR00423 Cell division protein FtsZ signature 95 115 7.2E-52 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 Gene3D G3DSA:3.40.50.1440 1 216 8.4E-82 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Tph_c12700 6937b93b55b26b2268cda839376c5abd 344 SMART SM00865 204 321 3.6E-64 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 Pfam PF02954 Bacterial regulatory protein, Fis family 597 637 1.1E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 4.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 620 640 4.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 426 441 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 SUPERFAMILY SSF52540 338 584 6.08E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 Pfam PF00158 Sigma-54 interaction domain 339 506 1.0E-63 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 Gene3D G3DSA:3.30.450.40 29 215 8.6E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 Gene3D G3DSA:1.10.10.60 595 640 8.0E-13 T 14-10-2018 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 553 562 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 Gene3D G3DSA:3.40.50.300 324 510 2.0E-61 T 14-10-2018 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 Gene3D G3DSA:1.10.8.60 511 589 2.9E-29 T 14-10-2018 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 363 376 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 SMART SM00382 359 504 6.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03780 7daf8eb726ec23f6d7604bc24622658a 640 SUPERFAMILY SSF46689 596 639 8.06E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c06370 426e3965c2a6a74a9690a2650c2494fe 218 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 10 33 6.4E-10 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Tph_c06370 426e3965c2a6a74a9690a2650c2494fe 218 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 119 138 6.4E-10 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Tph_c06370 426e3965c2a6a74a9690a2650c2494fe 218 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 6 195 3.2E-40 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 Tph_c06370 426e3965c2a6a74a9690a2650c2494fe 218 SUPERFAMILY SSF81342 3 205 9.68E-44 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tph_c06370 426e3965c2a6a74a9690a2650c2494fe 218 Pfam PF01292 Prokaryotic cytochrome b561 7 192 5.2E-29 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Tph_c06370 426e3965c2a6a74a9690a2650c2494fe 218 Gene3D G3DSA:1.20.950.20 1 185 2.7E-38 T 14-10-2018 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 ProSitePatterns PS00802 Transketolase signature 2. 420 436 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 Pfam PF02779 Transketolase, pyrimidine binding domain 315 474 5.4E-40 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 Pfam PF02780 Transketolase, C-terminal domain 490 611 7.2E-31 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 616 2.1E-251 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 Gene3D G3DSA:3.40.50.970 312 485 3.7E-70 T 14-10-2018 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 SMART SM00861 314 478 3.3E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 Gene3D G3DSA:3.40.50.920 490 619 3.2E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 SUPERFAMILY SSF52922 487 617 7.33E-34 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 SUPERFAMILY SSF52518 313 500 9.42E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 SUPERFAMILY SSF52518 3 376 1.71E-75 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 620 45.511 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tph_c16260 4462a10cd57ce70b7c968c6c92488364 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 278 3.7E-123 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tph_c01530 f24df354e4c91b46f8c5848b026e6689 182 Gene3D G3DSA:3.30.1330.130 1 141 1.2E-26 T 14-10-2018 Tph_c01530 f24df354e4c91b46f8c5848b026e6689 182 SUPERFAMILY SSF143555 4 137 2.22E-33 T 14-10-2018 Tph_c01530 f24df354e4c91b46f8c5848b026e6689 182 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 144 179 5.3E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tph_c01530 f24df354e4c91b46f8c5848b026e6689 182 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 15 104 1.7E-28 T 14-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain Tph_c02680 c9dd451e6ec75f8f249d81df2dbb8c3f 663 Gene3D G3DSA:3.40.50.720 292 613 4.5E-118 T 14-10-2018 Tph_c02680 c9dd451e6ec75f8f249d81df2dbb8c3f 663 Pfam PF13727 CoA-binding domain 60 249 6.2E-14 T 14-10-2018 Tph_c02680 c9dd451e6ec75f8f249d81df2dbb8c3f 663 Pfam PF02719 Polysaccharide biosynthesis protein 297 584 8.7E-121 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain Tph_c02680 c9dd451e6ec75f8f249d81df2dbb8c3f 663 Gene3D G3DSA:3.40.50.720 153 278 1.5E-41 T 14-10-2018 Tph_c02680 c9dd451e6ec75f8f249d81df2dbb8c3f 663 SUPERFAMILY SSF51735 155 284 1.34E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c02680 c9dd451e6ec75f8f249d81df2dbb8c3f 663 SUPERFAMILY SSF51735 294 562 1.27E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c24330 9a84c3696a8662205106af706ac496d5 566 SUPERFAMILY SSF53098 262 509 2.96E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c24330 9a84c3696a8662205106af706ac496d5 566 Pfam PF01609 Transposase DDE domain 251 496 1.5E-12 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c24230 9a84c3696a8662205106af706ac496d5 566 SUPERFAMILY SSF53098 262 509 2.96E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c24230 9a84c3696a8662205106af706ac496d5 566 Pfam PF01609 Transposase DDE domain 251 496 1.5E-12 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 SMART SM00866 92 232 1.5E-19 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 SUPERFAMILY SSF64288 61 236 8.79E-29 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 SMART SM00345 14 73 4.6E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 Gene3D G3DSA:1.10.10.10 8 78 5.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 SUPERFAMILY SSF46785 1 85 2.95E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 Gene3D G3DSA:3.40.1410.10 88 236 4.6E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.1E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27990 55297e7df91fa0162452c87828ef6b74 239 Pfam PF07702 UTRA domain 99 232 8.5E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 Gene3D G3DSA:2.40.50.140 1 126 8.5E-49 T 14-10-2018 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 SUPERFAMILY SSF52540 88 367 1.21E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 SMART SM00382 166 351 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 412 5.3E-204 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 SUPERFAMILY SSF50249 49 123 7.42E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 SMART SM00357 52 116 5.6E-20 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 226.821 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 123 2.8E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 SUPERFAMILY SSF68912 1 47 1.61E-12 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 Gene3D G3DSA:3.40.50.300 128 413 3.4E-127 T 14-10-2018 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 155 359 1.3E-19 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 1.4E-17 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Tph_c27810 159732a13c7cb7e40028e99f1daebaf5 418 SMART SM00959 5 47 1.3E-18 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 Tph_c12360 8e129ffac833ffb130c9f5a931d5beda 264 Pfam PF02547 Queuosine biosynthesis protein 4 264 8.6E-94 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tph_c12360 8e129ffac833ffb130c9f5a931d5beda 264 Gene3D G3DSA:2.40.10.240 64 159 1.7E-29 T 14-10-2018 Tph_c12360 8e129ffac833ffb130c9f5a931d5beda 264 SUPERFAMILY SSF111337 1 264 2.75E-90 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tph_c12360 8e129ffac833ffb130c9f5a931d5beda 264 Gene3D G3DSA:3.40.1780.10 160 264 4.8E-32 T 14-10-2018 Tph_c12360 8e129ffac833ffb130c9f5a931d5beda 264 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 264 2.1E-94 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Tph_c18020 5cc7aa49cbe073593420d4edf2643dfa 74 Pfam PF09723 Zinc ribbon domain 2 41 1.3E-11 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c18020 5cc7aa49cbe073593420d4edf2643dfa 74 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 2 47 2.1E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c18020 5cc7aa49cbe073593420d4edf2643dfa 74 SMART SM00834 2 42 1.3E-7 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 SUPERFAMILY SSF53218 6 204 9.16E-37 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 7 415 4.9E-97 T 14-10-2018 IPR008135 Competence-induced protein CinA Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 Gene3D G3DSA:3.90.950.20 253 417 9.9E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 SUPERFAMILY SSF142433 255 416 1.44E-53 T 14-10-2018 IPR036653 CinA-like, C-terminal Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 Gene3D G3DSA:3.40.980.10 6 175 1.2E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 SMART SM00852 8 175 5.4E-39 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 PIRSF PIRSF006728 4 421 6.1E-118 T 14-10-2018 IPR008135 Competence-induced protein CinA Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 267 414 4.4E-45 T 14-10-2018 IPR008136 CinA, C-terminal Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 Pfam PF00994 Probable molybdopterin binding domain 8 172 2.8E-33 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 425 136.175 T 14-10-2018 IPR008135 Competence-induced protein CinA Tph_c11560 ec4e1976d37e419677136ccfdf2f02b8 425 Pfam PF02464 Competence-damaged protein 261 415 9.7E-55 T 14-10-2018 IPR008136 CinA, C-terminal Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 Gene3D G3DSA:3.40.50.300 444 573 2.1E-10 T 14-10-2018 Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 Pfam PF00270 DEAD/DEAH box helicase 250 411 9.7E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 Gene3D G3DSA:3.40.50.300 215 423 5.0E-15 T 14-10-2018 Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 SUPERFAMILY SSF52540 241 562 2.89E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 Pfam PF00271 Helicase conserved C-terminal domain 457 553 8.1E-5 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 SMART SM00487 219 439 4.5E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 SUPERFAMILY SSF109604 15 98 2.62E-6 T 14-10-2018 Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 14 193 1.3E-19 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 SMART SM00490 471 553 0.0092 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 Gene3D G3DSA:1.10.3210.30 4 119 3.8E-10 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 Pfam PF01966 HD domain 15 98 1.6E-6 T 14-10-2018 IPR006674 HD domain Tph_c24410 05f09d5144980874ba43ff4825a02b98 755 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 252 591 1.4E-34 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Tph_c24970 77a657bb5465408fd57bfd4aaa76eed0 377 Gene3D G3DSA:1.20.1250.20 1 187 8.6E-32 T 14-10-2018 Tph_c24970 77a657bb5465408fd57bfd4aaa76eed0 377 Gene3D G3DSA:1.20.1250.20 193 374 2.2E-15 T 14-10-2018 Tph_c24970 77a657bb5465408fd57bfd4aaa76eed0 377 SUPERFAMILY SSF103473 5 372 7.85E-53 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c24970 77a657bb5465408fd57bfd4aaa76eed0 377 ProSitePatterns PS00216 Sugar transport proteins signature 1. 60 76 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Tph_c24970 77a657bb5465408fd57bfd4aaa76eed0 377 Pfam PF07690 Major Facilitator Superfamily 11 218 2.8E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 546 3.0E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 708 753 3.0E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 609 651 9.7E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 700 1.2E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 553 601 6.0E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 757 802 1.5E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 SUPERFAMILY SSF101904 497 808 1.2E-109 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Gene3D G3DSA:3.30.1360.40 235 331 1.2E-212 T 14-10-2018 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Gene3D G3DSA:2.120.10.90 494 804 1.2E-127 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Gene3D G3DSA:1.10.268.10 368 456 1.2E-212 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 SMART SM00434 10 463 1.0E-283 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 466 6.4E-160 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 805 24.71 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 Gene3D G3DSA:3.90.199.10 31 485 1.2E-212 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 803 0.0 T 14-10-2018 Tph_c00130 331b37fe5845240f7e5bfb36b7cfc9eb 815 SUPERFAMILY SSF56719 29 485 7.59E-178 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 260 275 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Pfam PF02542 YgbB family 227 379 1.5E-56 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 208 4.8E-56 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1 208 1.4E-62 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 86 93 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Gene3D G3DSA:3.90.550.10 1 214 8.1E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 SUPERFAMILY SSF53448 1 208 1.91E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 227 380 7.8E-56 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 1 382 33.208 T 14-10-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 SUPERFAMILY SSF69765 227 381 9.68E-59 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 208 36.78 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Gene3D G3DSA:3.30.1330.50 225 386 7.6E-62 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tph_c03860 6b55c3b41a655c7ac342799b66609285 393 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 226 381 33.594 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Pfam PF00989 PAS fold 252 362 4.1E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 488 639 1.8E-37 T 14-10-2018 IPR000160 GGDEF domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Gene3D G3DSA:3.30.450.20 132 249 2.4E-15 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SUPERFAMILY SSF55785 366 479 8.38E-23 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Pfam PF13487 HD domain 715 777 1.5E-20 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SUPERFAMILY SSF109604 651 824 5.34E-39 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Gene3D G3DSA:3.30.450.20 250 363 7.3E-23 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00091 250 319 3.7E-7 T 14-10-2018 IPR000014 PAS domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00091 135 201 0.15 T 14-10-2018 IPR000014 PAS domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00091 370 435 1.5E-11 T 14-10-2018 IPR000014 PAS domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Pfam PF08447 PAS fold 394 469 4.0E-16 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Pfam PF00990 Diguanylate cyclase, GGDEF domain 493 638 3.1E-37 T 14-10-2018 IPR000160 GGDEF domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Gene3D G3DSA:3.30.70.270 482 647 6.2E-45 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Pfam PF08448 PAS fold 141 245 2.2E-9 T 14-10-2018 IPR013656 PAS fold-4 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 367 488 5.4E-28 T 14-10-2018 IPR000014 PAS domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 248 371 7.3E-18 T 14-10-2018 IPR000014 PAS domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Gene3D G3DSA:3.30.450.20 368 481 4.3E-23 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SUPERFAMILY SSF55785 119 238 6.44E-14 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00471 660 795 9.5E-7 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00086 324 365 4.9 T 14-10-2018 IPR001610 PAC motif Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00086 441 481 0.045 T 14-10-2018 IPR001610 PAC motif Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SUPERFAMILY SSF55785 242 363 1.47E-17 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SMART SM00267 481 652 3.5E-44 T 14-10-2018 IPR000160 GGDEF domain Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 Gene3D G3DSA:1.10.3210.10 648 834 1.9E-71 T 14-10-2018 Tph_c20870 e9375709ba78d5e9ef051a898fb4aebf 839 SUPERFAMILY SSF55073 497 638 2.51E-36 T 14-10-2018 IPR029787 Nucleotide cyclase Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 20 190 5.1E-62 T 14-10-2018 IPR006340 Protein of unknown function DUF436 Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 Pfam PF04260 Protein of unknown function (DUF436) 20 190 1.5E-70 T 14-10-2018 IPR006340 Protein of unknown function DUF436 Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 PIRSF PIRSF007510 12 193 2.1E-68 T 14-10-2018 IPR006340 Protein of unknown function DUF436 Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 Hamap MF_00800 UPF0340 protein . 1 196 78.027 T 14-10-2018 IPR006340 Protein of unknown function DUF436 Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 SUPERFAMILY SSF110710 15 193 1.05E-68 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 Gene3D G3DSA:3.40.50.10360 14 196 6.6E-73 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like Tph_c17160 f906f23e032ed6316c74e8882a7b4ac0 196 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 24 194 3.0E-41 T 14-10-2018 IPR006340 Protein of unknown function DUF436 Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 PIRSF PIRSF001413 1 397 1.7E-170 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 Gene3D G3DSA:3.40.50.1100 55 384 3.2E-191 T 14-10-2018 Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 3.2E-198 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 SUPERFAMILY SSF53686 4 389 5.24E-151 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 82 96 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 54 378 2.0E-50 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 3 391 55.42 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26500 dfa07631caa84fb007ac4ba52c487159 414 Gene3D G3DSA:3.40.50.1100 11 207 3.2E-191 T 14-10-2018 Tph_c10410 f4d0fc44a1663231073d21aa951f07ed 156 Pfam PF08282 haloacid dehalogenase-like hydrolase 75 136 1.6E-4 T 14-10-2018 Tph_c10410 f4d0fc44a1663231073d21aa951f07ed 156 SUPERFAMILY SSF56784 17 138 4.46E-14 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c10410 f4d0fc44a1663231073d21aa951f07ed 156 Gene3D G3DSA:3.40.50.1000 12 154 4.1E-14 T 14-10-2018 IPR023214 HAD superfamily Tph_c27050 81c2f7e7770057d31aca7663639d3e16 474 Gene3D G3DSA:2.30.40.10 4 463 1.0E-160 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c27050 81c2f7e7770057d31aca7663639d3e16 474 SUPERFAMILY SSF51556 55 391 3.68E-87 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c27050 81c2f7e7770057d31aca7663639d3e16 474 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 462 1.8E-135 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 Tph_c27050 81c2f7e7770057d31aca7663639d3e16 474 Pfam PF01979 Amidohydrolase family 51 441 2.6E-24 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c27050 81c2f7e7770057d31aca7663639d3e16 474 Gene3D G3DSA:3.20.20.140 55 431 1.0E-160 T 14-10-2018 Tph_c27050 81c2f7e7770057d31aca7663639d3e16 474 SUPERFAMILY SSF51338 1 462 1.37E-36 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c09300 24f596fec347d98986561e46a2d13751 262 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 259 17.089 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tph_c09300 24f596fec347d98986561e46a2d13751 262 Pfam PF02673 Bacitracin resistance protein BacA 6 254 5.8E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tph_c09300 24f596fec347d98986561e46a2d13751 262 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 252 1.8E-66 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 Tph_c22580 71117c24f5faae33d25ac2f90c5886e9 280 Gene3D G3DSA:3.60.15.10 2 277 8.4E-88 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c22580 71117c24f5faae33d25ac2f90c5886e9 280 SUPERFAMILY SSF56281 9 278 8.91E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c22580 71117c24f5faae33d25ac2f90c5886e9 280 Pfam PF00753 Metallo-beta-lactamase superfamily 29 92 1.3E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c22580 71117c24f5faae33d25ac2f90c5886e9 280 SMART SM00849 26 249 3.9E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 SMART SM00322 59 124 7.6E-9 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.1E-39 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 SUPERFAMILY SSF54821 106 205 6.15E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 SUPERFAMILY SSF54814 2 105 7.29E-39 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.8E-94 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 Pfam PF07650 KH domain 38 110 7.8E-22 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 Gene3D G3DSA:3.30.300.20 17 106 5.0E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 Gene3D G3DSA:3.30.1140.32 107 207 4.0E-42 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25790 0667dc1d9e4ce3011a993da8a27e2d20 226 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.884 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 Gene3D G3DSA:3.40.50.150 65 256 2.9E-58 T 14-10-2018 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 2 52 4.3E-14 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 96 116 1.7E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 214 237 1.7E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 59 71 1.7E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 22 35 1.7E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 128 144 1.7E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 195 209 1.7E-35 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 SMART SM00138 2 254 3.3E-92 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 66 240 2.0E-53 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 SUPERFAMILY SSF47757 2 65 5.49E-14 T 14-10-2018 Tph_c15260 0a6dae58ba6563925ad2f866024b00f8 257 SUPERFAMILY SSF53335 66 241 9.77E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Gene3D G3DSA:3.30.70.100 86 152 9.7E-21 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 SUPERFAMILY SSF56784 531 837 5.6E-62 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 534 540 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Gene3D G3DSA:3.30.70.100 18 85 1.1E-20 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Pfam PF00122 E1-E2 ATPase 312 511 3.3E-56 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 20 83 9.6E-14 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 90 151 2.3E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 244 840 5.0E-200 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 SUPERFAMILY SSF81653 315 411 2.09E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 SUPERFAMILY SSF81665 279 802 1.01E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 ProSitePatterns PS01047 Heavy-metal-associated domain. 92 121 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.2E-30 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 546 1.2E-30 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 731 750 1.2E-30 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 754 766 1.2E-30 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 667 1.2E-30 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 678 688 1.2E-30 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Pfam PF00702 haloacid dehalogenase-like hydrolase 529 745 2.3E-52 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 SUPERFAMILY SSF55008 86 152 7.85E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Pfam PF00403 Heavy-metal-associated domain 21 82 1.4E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Pfam PF00403 Heavy-metal-associated domain 90 150 2.8E-13 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Gene3D G3DSA:3.40.1110.10 543 663 2.6E-101 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 SUPERFAMILY SSF55008 16 83 2.09E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 ProSitePatterns PS01047 Heavy-metal-associated domain. 24 53 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Gene3D G3DSA:3.40.50.1000 513 783 2.6E-101 T 14-10-2018 IPR023214 HAD superfamily Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 Gene3D G3DSA:2.70.150.20 304 416 1.7E-45 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00942 Copper-transporting ATPase 1 signature 227 252 1.1E-11 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00942 Copper-transporting ATPase 1 signature 45 68 1.1E-11 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 PRINTS PR00942 Copper-transporting ATPase 1 signature 19 44 1.1E-11 T 14-10-2018 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 285 455 7.7E-25 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c20670 ee01a2c01f3d851fcf5ebbc10ce37400 852 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 463 809 5.4E-71 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Gene3D G3DSA:1.10.10.60 417 475 2.5E-16 T 14-10-2018 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 SUPERFAMILY SSF55785 10 122 2.97E-19 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 126 5.6E-16 T 14-10-2018 IPR000014 PAS domain Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Gene3D G3DSA:3.40.50.300 146 328 1.2E-60 T 14-10-2018 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 453 1.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 453 473 1.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Pfam PF02954 Bacterial regulatory protein, Fis family 430 470 2.7E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 SMART SM00091 13 80 2.0E-7 T 14-10-2018 IPR000014 PAS domain Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 SUPERFAMILY SSF46689 370 472 2.76E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 370 379 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 SUPERFAMILY SSF52540 158 402 6.19E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Pfam PF00158 Sigma-54 interaction domain 160 323 4.7E-61 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Gene3D G3DSA:1.10.8.60 329 411 1.5E-19 T 14-10-2018 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Pfam PF00989 PAS fold 14 121 5.2E-12 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tph_c20420 701b104ebbda4cf10e1bf13181823434 478 Gene3D G3DSA:3.30.450.20 4 122 3.9E-21 T 14-10-2018 Tph_c10800 c373b368bd41ae0df6135afc7f8d48f7 148 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 97 143 1.0E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tph_c10800 c373b368bd41ae0df6135afc7f8d48f7 148 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 7 147 3.0E-48 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 Tph_c10800 c373b368bd41ae0df6135afc7f8d48f7 148 Pfam PF00460 Flagella basal body rod protein 9 36 3.2E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tph_c28600 28335a2bbc985cced1b2c933162ce670 250 SUPERFAMILY SSF55797 127 247 6.8E-14 T 14-10-2018 IPR035940 CAP superfamily Tph_c28600 28335a2bbc985cced1b2c933162ce670 250 Pfam PF00188 Cysteine-rich secretory protein family 133 240 6.5E-10 T 14-10-2018 IPR014044 CAP domain Tph_c28600 28335a2bbc985cced1b2c933162ce670 250 Gene3D G3DSA:3.40.33.10 55 248 2.0E-37 T 14-10-2018 IPR035940 CAP superfamily Tph_c13810 d43ec94f280a91243a742bfe28168226 252 Pfam PF00005 ABC transporter 21 160 3.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c13810 d43ec94f280a91243a742bfe28168226 252 SMART SM00382 30 219 1.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c13810 d43ec94f280a91243a742bfe28168226 252 Gene3D G3DSA:3.40.50.300 1 238 5.8E-61 T 14-10-2018 Tph_c13810 d43ec94f280a91243a742bfe28168226 252 SUPERFAMILY SSF52540 1 214 1.43E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13810 d43ec94f280a91243a742bfe28168226 252 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c09070 a19670cb5d26fb4f0bb3d7e3de59f672 140 SMART SM01066 53 135 7.7E-32 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 Tph_c09070 a19670cb5d26fb4f0bb3d7e3de59f672 140 Gene3D G3DSA:2.60.40.10 52 139 1.1E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c09070 a19670cb5d26fb4f0bb3d7e3de59f672 140 Pfam PF16760 Starch/carbohydrate-binding module (family 53) 56 134 1.7E-16 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 SUPERFAMILY SSF88659 170 258 3.36E-24 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 SUPERFAMILY SSF88946 10 102 1.29E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 SUPERFAMILY SSF88659 103 165 6.54E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 226 252 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 255 7.0E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 PRINTS PR00046 Major sigma-70 factor signature 57 70 5.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 PRINTS PR00046 Major sigma-70 factor signature 209 221 5.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 PRINTS PR00046 Major sigma-70 factor signature 226 241 5.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 PRINTS PR00046 Major sigma-70 factor signature 241 252 5.5E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 Pfam PF04542 Sigma-70 region 2 30 102 1.7E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 PIRSF PIRSF000770 5 264 7.4E-45 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 Pfam PF04545 Sigma-70, region 4 205 253 2.2E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 Pfam PF04539 Sigma-70 region 3 112 162 6.0E-8 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 Gene3D G3DSA:1.10.1740.10 15 100 1.6E-25 T 14-10-2018 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 Gene3D G3DSA:1.20.140.160 101 259 4.3E-47 T 14-10-2018 Tph_c11100 1411e7d7c6ea4af4e9a56efcf301bf17 265 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 30 256 1.7E-75 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Tph_c14390 0619f6e3d5e3fa668b0bc1366712c1e6 587 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 459 2.0E-137 T 14-10-2018 Tph_c14390 0619f6e3d5e3fa668b0bc1366712c1e6 587 Pfam PF05670 Domain of unknown function (DUF814) 472 560 2.3E-26 T 14-10-2018 IPR008532 Domain of unknown function DUF814 Tph_c14390 0619f6e3d5e3fa668b0bc1366712c1e6 587 SUPERFAMILY SSF46946 172 243 4.71E-8 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Tph_c14390 0619f6e3d5e3fa668b0bc1366712c1e6 587 Gene3D G3DSA:2.30.310.10 1 167 8.1E-57 T 14-10-2018 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 SUPERFAMILY SSF46946 134 222 7.33E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 40.351 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 Pfam PF06827 Zinc finger found in FPG and IleRS 246 274 2.8E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 Gene3D G3DSA:1.10.8.50 136 274 5.5E-47 T 14-10-2018 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 1.4E-90 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 SUPERFAMILY SSF81624 2 142 4.71E-38 T 14-10-2018 IPR035937 MutM-like, N-terminal Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 SUPERFAMILY SSF57716 222 274 1.8E-16 T 14-10-2018 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 Gene3D G3DSA:3.20.190.10 2 133 7.6E-42 T 14-10-2018 IPR035937 MutM-like, N-terminal Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 2.4E-24 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 1.1E-33 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 SMART SM01232 134 226 2.0E-43 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Tph_c18080 ab2edfb4a6597a186a7d8f4d32c61805 274 SMART SM00898 2 118 4.3E-46 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Tph_c11610 386918aac5e580f81514a1fdc82b8ee8 260 Pfam PF13277 YmdB-like protein 4 255 9.6E-109 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Tph_c11610 386918aac5e580f81514a1fdc82b8ee8 260 SUPERFAMILY SSF56300 1 257 3.07E-84 T 14-10-2018 Tph_c11610 386918aac5e580f81514a1fdc82b8ee8 260 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 257 3.6E-93 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Tph_c11610 386918aac5e580f81514a1fdc82b8ee8 260 Gene3D G3DSA:3.60.21.10 1 260 3.7E-114 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c11610 386918aac5e580f81514a1fdc82b8ee8 260 PIRSF PIRSF004789 1 260 1.0E-98 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Gene3D G3DSA:3.90.190.20 315 461 6.2E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 SUPERFAMILY SSF63418 2 100 3.27E-25 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 455 5.6E-139 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Gene3D G3DSA:3.40.1390.10 1 84 3.1E-26 T 14-10-2018 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Pfam PF01225 Mur ligase family, catalytic domain 25 99 1.9E-14 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 SUPERFAMILY SSF53623 103 312 3.27E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 456 35.336 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 SUPERFAMILY SSF53244 317 455 4.27E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 396 5.9E-14 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Gene3D G3DSA:3.40.1190.10 85 312 9.3E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12600 893831d3da06a37fffcb407d30f8d889 462 Pfam PF08245 Mur ligase middle domain 109 295 1.1E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c17680 d846e6bbf172ee994044378e22ae1b05 187 Pfam PF04203 Sortase family 64 182 8.0E-25 T 14-10-2018 IPR005754 Sortase family Tph_c17680 d846e6bbf172ee994044378e22ae1b05 187 TIGRFAM TIGR01076 sortase_fam: sortase 64 181 7.5E-18 T 14-10-2018 IPR005754 Sortase family Tph_c17680 d846e6bbf172ee994044378e22ae1b05 187 Gene3D G3DSA:2.40.260.10 35 187 1.4E-33 T 14-10-2018 IPR023365 Sortase domain superfamily Tph_c17680 d846e6bbf172ee994044378e22ae1b05 187 SUPERFAMILY SSF63817 61 184 1.96E-26 T 14-10-2018 IPR023365 Sortase domain superfamily Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 5 416 44.789 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 13 406 3.2E-162 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 Gene3D G3DSA:3.40.309.10 226 374 7.5E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 PIRSF PIRSF000151 1 417 1.0E-186 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 Pfam PF00171 Aldehyde dehydrogenase family 12 282 8.0E-19 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 Pfam PF00171 Aldehyde dehydrogenase family 308 406 7.2E-7 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 Gene3D G3DSA:3.40.605.10 18 411 7.5E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Tph_c21550 659c08aeb804e57b1d745f7c975ab49c 417 SUPERFAMILY SSF53720 6 416 1.57E-130 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 386 414 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 250 283 4.4E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 303 334 3.6E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 SUPERFAMILY SSF53448 1 236 6.28E-55 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 435 36.766 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 SUPERFAMILY SSF51161 238 421 7.07E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Pfam PF12804 MobA-like NTP transferase domain 6 121 5.0E-19 T 14-10-2018 IPR025877 MobA-like NTP transferase Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 380 412 8.2E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 438 2.1E-160 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Gene3D G3DSA:3.90.550.10 1 211 1.5E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c28340 52b8b4992c940efbd3008f6be714135e 446 Gene3D G3DSA:2.160.10.10 212 439 2.6E-66 T 14-10-2018 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Gene3D G3DSA:3.40.228.10 143 335 7.8E-179 T 14-10-2018 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Pfam PF01568 Molydopterin dinucleotide binding domain 612 709 5.6E-21 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Gene3D G3DSA:3.40.50.740 61 533 7.8E-179 T 14-10-2018 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 56 1.1E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 445 462 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Gene3D G3DSA:2.40.40.20 571 729 7.4E-46 T 14-10-2018 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 SUPERFAMILY SSF50692 562 728 2.71E-32 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Pfam PF00384 Molybdopterin oxidoreductase 59 499 6.2E-59 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 Gene3D G3DSA:2.20.25.90 1 60 1.5E-20 T 14-10-2018 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 SUPERFAMILY SSF53706 3 601 2.75E-164 T 14-10-2018 Tph_c01280 10f4a8db58f39a600c4724d96c1d6c76 732 SMART SM00926 2 56 1.5E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 SUPERFAMILY SSF54862 2 181 2.09E-54 T 14-10-2018 Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 Gene3D G3DSA:3.30.70.20 4 181 2.5E-55 T 14-10-2018 Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 Pfam PF13247 4Fe-4S dicluster domain 59 154 1.3E-27 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 Gene3D G3DSA:3.30.70.20 73 125 2.5E-55 T 14-10-2018 Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 Gene3D G3DSA:2.60.40.10 184 267 1.5E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 SUPERFAMILY SSF49478 188 257 1.57E-10 T 14-10-2018 Tph_c01440 a87516bea8fe59555b50931b80732dfe 270 Pfam PF13620 Carboxypeptidase regulatory-like domain 188 259 8.8E-14 T 14-10-2018 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 285 50.354 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 Pfam PF00398 Ribosomal RNA adenine dimethylase 22 246 7.5E-54 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 Gene3D G3DSA:1.10.8.100 220 286 9.7E-17 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 Gene3D G3DSA:3.40.50.150 2 216 5.2E-70 T 14-10-2018 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 SMART SM00650 35 212 3.0E-76 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 283 6.5E-73 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Tph_c28690 0ea3690ead849734858bc2689d54ca66 293 SUPERFAMILY SSF53335 16 287 6.78E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 451 460 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 262 275 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 SUPERFAMILY SSF52540 238 480 3.75E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 SUPERFAMILY SSF46689 499 548 9.86E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 Pfam PF13426 PAS domain 109 203 9.1E-10 T 14-10-2018 IPR000014 PAS domain Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 96 208 7.2E-11 T 14-10-2018 IPR000014 PAS domain Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 SUPERFAMILY SSF55785 96 196 7.5E-13 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 Gene3D G3DSA:1.10.10.60 478 550 4.3E-5 T 14-10-2018 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 325 340 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 Pfam PF00158 Sigma-54 interaction domain 239 406 2.4E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 SMART SM00382 258 402 6.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 SMART SM00091 96 159 0.0025 T 14-10-2018 IPR000014 PAS domain Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 Gene3D G3DSA:1.10.8.60 410 476 1.6E-23 T 14-10-2018 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 Gene3D G3DSA:3.30.450.20 81 222 1.1E-18 T 14-10-2018 Tph_c27780 317cf25898c6cf1f8e2086df0d4755bd 552 Gene3D G3DSA:3.40.50.300 228 409 9.4E-68 T 14-10-2018 Tph_c09810 f240a055861794887d24a494eae0c412 284 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c09810 f240a055861794887d24a494eae0c412 284 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 40.139 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c09810 f240a055861794887d24a494eae0c412 284 Pfam PF17284 Spermidine synthase tetramerisation domain 3 54 5.3E-19 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c09810 f240a055861794887d24a494eae0c412 284 SUPERFAMILY SSF53335 3 275 2.41E-87 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c09810 f240a055861794887d24a494eae0c412 284 Pfam PF01564 Spermine/spermidine synthase domain 58 236 1.9E-61 T 14-10-2018 Tph_c09810 f240a055861794887d24a494eae0c412 284 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 4.3E-99 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c09810 f240a055861794887d24a494eae0c412 284 Gene3D G3DSA:2.30.140.10 1 52 1.3E-21 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c09810 f240a055861794887d24a494eae0c412 284 Gene3D G3DSA:3.40.50.150 54 276 1.8E-75 T 14-10-2018 Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 SUPERFAMILY SSF47781 134 205 4.89E-31 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 142 206 3.0E-21 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 Pfam PF10531 SLBB domain 58 111 3.5E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 Pfam PF12836 Helix-hairpin-helix motif 144 205 1.0E-25 T 14-10-2018 Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 SMART SM00278 184 203 19.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 SMART SM00278 154 173 0.0096 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 Gene3D G3DSA:1.10.150.320 134 205 6.1E-25 T 14-10-2018 Tph_c21370 3a96b809f67f85bbba1b714c42153e92 206 Gene3D G3DSA:3.10.560.10 45 118 5.0E-5 T 14-10-2018 Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 428 49.196 T 14-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 Gene3D G3DSA:3.20.20.140 60 347 5.1E-163 T 14-10-2018 Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 SUPERFAMILY SSF51338 2 73 2.16E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 Gene3D G3DSA:2.30.40.10 19 419 5.1E-163 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 SUPERFAMILY SSF51556 59 352 6.81E-106 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 SUPERFAMILY SSF51338 312 428 9.18E-33 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c10210 108a171659ad75e88399caf0fa54bb40 429 Pfam PF01979 Amidohydrolase family 58 402 1.2E-80 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c05330 9cd8492a53121db02508b7a145d79036 322 SUPERFAMILY SSF53448 6 272 8.55E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c05330 9cd8492a53121db02508b7a145d79036 322 Gene3D G3DSA:3.90.550.10 1 293 1.2E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c05330 9cd8492a53121db02508b7a145d79036 322 Pfam PF00483 Nucleotidyl transferase 8 270 3.3E-33 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tph_c05330 9cd8492a53121db02508b7a145d79036 322 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 268 1.1E-115 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 382 46.506 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 228 9.5E-40 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 Gene3D G3DSA:1.10.1740.10 302 385 5.8E-30 T 14-10-2018 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 PIRSF PIRSF006205 2 388 2.0E-157 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 SUPERFAMILY SSF55347 125 263 1.01E-59 T 14-10-2018 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 Gene3D G3DSA:3.40.50.720 1 149 1.0E-49 T 14-10-2018 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 131 1.6E-39 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 382 1.2E-149 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 Pfam PF13288 DXP reductoisomerase C-terminal domain 260 377 8.1E-44 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 SUPERFAMILY SSF51735 2 149 1.07E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c11230 983991914b85b66c5f69382ae2e08e4e 389 SUPERFAMILY SSF69055 291 385 5.75E-32 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Tph_c11320 33fba7e51ac58913b6277e791cfc8ad3 116 Gene3D G3DSA:3.30.300.20 2 116 4.6E-38 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c11320 33fba7e51ac58913b6277e791cfc8ad3 116 Pfam PF02033 Ribosome-binding factor A 4 108 5.0E-34 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tph_c11320 33fba7e51ac58913b6277e791cfc8ad3 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 108 26.842 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tph_c11320 33fba7e51ac58913b6277e791cfc8ad3 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 95 2.0E-26 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tph_c11320 33fba7e51ac58913b6277e791cfc8ad3 116 SUPERFAMILY SSF89919 3 111 2.35E-34 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Tph_c11320 33fba7e51ac58913b6277e791cfc8ad3 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 113 2.4E-37 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 SUPERFAMILY SSF52540 17 225 3.04E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Gene3D G3DSA:1.20.272.10 244 348 5.2E-45 T 14-10-2018 Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 SMART SM00382 51 192 4.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Pfam PF16193 AAA C-terminal domain 191 270 3.6E-23 T 14-10-2018 IPR032423 AAA C-terminal domain Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Pfam PF12002 MgsA AAA+ ATPase C terminal 271 436 6.1E-73 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Gene3D G3DSA:3.40.50.300 7 166 9.3E-41 T 14-10-2018 Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 SUPERFAMILY SSF48019 256 438 1.3E-76 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 142 5.7E-18 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Gene3D G3DSA:1.10.8.60 168 239 4.4E-19 T 14-10-2018 Tph_c17310 58e79b756dad7fd3d516e6d312e8595a 444 Gene3D G3DSA:1.10.3710.10 351 444 4.7E-29 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.7E-47 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:1.20.1640.10 507 1012 0.0 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82693 560 657 2.2E-15 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Pfam PF00873 AcrB/AcrD/AcrF family 5 1015 1.1E-277 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82714 712 795 2.75E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:3.30.70.1440 662 855 0.0 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:3.30.2090.10 710 798 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:1.20.1640.10 10 506 0.0 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:3.30.70.1320 132 324 0.0 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82866 288 488 1.03E-45 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82866 795 1018 1.11E-55 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82693 136 321 2.01E-19 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:3.30.70.1430 40 806 0.0 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82714 181 264 7.72E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 SUPERFAMILY SSF82693 40 133 8.89E-29 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:3.30.70.1430 561 661 0.0 T 14-10-2018 Tph_c02250 692721c31e0b5b0e4cc1e0494185d2eb 1035 Gene3D G3DSA:3.30.2090.10 177 267 0.0 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains Tph_c22550 976328b6a4559e8c3434080d1416b462 286 SUPERFAMILY SSF52540 27 257 2.25E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c22550 976328b6a4559e8c3434080d1416b462 286 Hamap MF_02040 Iron-sulfur cluster carrier protein. 29 273 34.885 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Tph_c22550 976328b6a4559e8c3434080d1416b462 286 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 34 276 8.6E-89 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Tph_c22550 976328b6a4559e8c3434080d1416b462 286 Gene3D G3DSA:3.40.50.300 22 275 2.2E-75 T 14-10-2018 Tph_c19650 29a8c67e08fadead372c95d388e03b3d 320 Gene3D G3DSA:3.40.50.970 1 320 2.4E-135 T 14-10-2018 Tph_c19650 29a8c67e08fadead372c95d388e03b3d 320 SUPERFAMILY SSF52518 2 320 9.32E-109 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c19650 29a8c67e08fadead372c95d388e03b3d 320 Pfam PF00676 Dehydrogenase E1 component 14 310 7.8E-95 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 SUPERFAMILY SSF46934 2 54 3.51E-20 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 Hamap MF_00050 Elongation factor Ts [tsf]. 1 198 46.982 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 94 1.6E-36 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 Gene3D G3DSA:3.30.479.20 58 195 2.4E-58 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 ProSitePatterns PS01126 Elongation factor Ts signature 1. 10 25 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 Gene3D G3DSA:1.10.8.10 1 54 6.8E-27 T 14-10-2018 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 Pfam PF00889 Elongation factor TS 50 196 2.2E-42 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 SUPERFAMILY SSF54713 55 196 5.36E-53 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Tph_c11150 dcd773d60314aeb0bc1da215a3d2d0f1 198 Gene3D G3DSA:1.10.286.20 110 154 2.4E-58 T 14-10-2018 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 Gene3D G3DSA:3.60.120.10 4 468 8.3E-169 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 SUPERFAMILY SSF56322 16 462 3.01E-153 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 Pfam PF04715 Anthranilate synthase component I, N terminal region 9 145 2.9E-34 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 95 456 3.9E-124 T 14-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 PRINTS PR00095 Anthranilate synthase component I signature 314 327 1.1E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 PRINTS PR00095 Anthranilate synthase component I signature 409 423 1.1E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 PRINTS PR00095 Anthranilate synthase component I signature 394 408 1.1E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 PRINTS PR00095 Anthranilate synthase component I signature 300 313 1.1E-18 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 98 455 2.6E-109 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 Tph_c20550 ec7a05fdec418074db5d059e9fee6b80 472 Pfam PF00425 chorismate binding enzyme 199 452 5.2E-101 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Tph_c05240 74afdefc0e6a1102fb00dcfbb367dfbd 244 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 7.3E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c05240 74afdefc0e6a1102fb00dcfbb367dfbd 244 Gene3D G3DSA:3.30.950.10 132 239 3.1E-19 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tph_c05240 74afdefc0e6a1102fb00dcfbb367dfbd 244 Gene3D G3DSA:3.40.1010.10 1 131 9.2E-34 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c05240 74afdefc0e6a1102fb00dcfbb367dfbd 244 PIRSF PIRSF036427 3 240 1.9E-68 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Tph_c05240 74afdefc0e6a1102fb00dcfbb367dfbd 244 SUPERFAMILY SSF53790 4 239 2.22E-45 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c05240 74afdefc0e6a1102fb00dcfbb367dfbd 244 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 5 232 6.4E-70 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 Pfam PF12727 PBP superfamily domain 107 296 8.2E-62 T 14-10-2018 IPR024370 PBP domain Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 SUPERFAMILY SSF53850 139 309 3.32E-19 T 14-10-2018 Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 Pfam PF12728 Helix-turn-helix domain 7 54 3.7E-16 T 14-10-2018 Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 Gene3D G3DSA:3.40.190.10 175 276 1.3E-6 T 14-10-2018 Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 Gene3D G3DSA:1.10.1660.10 5 54 2.1E-11 T 14-10-2018 Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 52 1.6E-16 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Tph_c26390 6ad4d265f07c2929fcddcde1134439b2 323 SUPERFAMILY SSF46955 7 53 4.76E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 563 572 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 436 451 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Gene3D G3DSA:3.30.450.20 232 337 2.9E-19 T 14-10-2018 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Pfam PF01590 GAF domain 70 196 9.5E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Pfam PF13426 PAS domain 235 325 1.9E-8 T 14-10-2018 IPR000014 PAS domain Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Gene3D G3DSA:3.30.450.40 22 208 2.0E-66 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 SUPERFAMILY SSF46689 563 669 3.14E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 223 329 2.5E-7 T 14-10-2018 IPR000014 PAS domain Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 SMART SM00382 369 513 4.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 SUPERFAMILY SSF55781 68 198 9.81E-7 T 14-10-2018 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Gene3D G3DSA:1.10.10.60 613 671 2.1E-14 T 14-10-2018 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 SUPERFAMILY SSF55785 210 323 4.71E-14 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 632 649 7.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 649 669 7.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 373 386 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Pfam PF00158 Sigma-54 interaction domain 349 516 4.4E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 SUPERFAMILY SSF52540 348 594 1.08E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Pfam PF02954 Bacterial regulatory protein, Fis family 627 664 7.8E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Gene3D G3DSA:3.40.50.300 338 520 6.2E-67 T 14-10-2018 Tph_c19460 55f9a30ed236e114315227a75c8c0624 672 Gene3D G3DSA:1.10.8.60 521 598 4.3E-27 T 14-10-2018 Tph_c02080 4561694ae359214d7d5c6c172a8405b6 80 Gene3D G3DSA:1.10.1220.10 2 58 1.0E-6 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Tph_c02080 4561694ae359214d7d5c6c172a8405b6 80 Pfam PF01402 Ribbon-helix-helix protein, copG family 8 42 5.8E-10 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Tph_c02080 4561694ae359214d7d5c6c172a8405b6 80 SUPERFAMILY SSF47598 6 44 1.62E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Tph_c00820 bebe36355c37f7a6710ba7415466a3af 140 Gene3D G3DSA:1.20.120.580 1 140 3.2E-24 T 14-10-2018 IPR037038 Bsu32300-like superfamily Tph_c00820 bebe36355c37f7a6710ba7415466a3af 140 Pfam PF01934 Protein of unknown function DUF86 14 130 6.3E-28 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 SMART SM00839 145 353 2.0E-49 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 SUPERFAMILY SSF51735 140 343 1.38E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c04750 dfd577889b0d965de2d5545198aee543 359 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 Gene3D G3DSA:3.40.50.10860 10 345 2.1E-131 T 14-10-2018 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 140 204 1.5E-7 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 214 295 6.1E-10 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 SUPERFAMILY SSF53223 4 142 1.09E-40 T 14-10-2018 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 PIRSF PIRSF000188 1 355 9.4E-141 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 2.5E-19 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 2.5E-19 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 2.5E-19 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 2.5E-19 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 16 121 3.4E-19 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 Tph_c04750 dfd577889b0d965de2d5545198aee543 359 Gene3D G3DSA:3.40.50.720 133 338 2.1E-131 T 14-10-2018 Tph_c05910 95ed7433826e9d5cbe14735491ca6fd7 239 Gene3D G3DSA:3.20.20.140 3 238 5.1E-64 T 14-10-2018 Tph_c05910 95ed7433826e9d5cbe14735491ca6fd7 239 Pfam PF13263 PHP-associated 178 204 1.7E-5 T 14-10-2018 Tph_c05910 95ed7433826e9d5cbe14735491ca6fd7 239 SUPERFAMILY SSF89550 5 237 3.27E-59 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c05910 95ed7433826e9d5cbe14735491ca6fd7 239 SMART SM00481 5 79 4.4E-14 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tph_c05910 95ed7433826e9d5cbe14735491ca6fd7 239 Pfam PF02811 PHP domain 6 113 3.6E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 PRINTS PR00340 P-II protein signature 60 83 3.4E-31 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 PRINTS PR00340 P-II protein signature 91 111 3.4E-31 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 PRINTS PR00340 P-II protein signature 2 17 3.4E-31 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 PRINTS PR00340 P-II protein signature 23 41 3.4E-31 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 SUPERFAMILY SSF54913 1 120 1.21E-31 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 ProSitePatterns PS00638 P-II protein C-terminal region signature. 91 104 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 Pfam PF00543 Nitrogen regulatory protein P-II 4 113 4.6E-33 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 Gene3D G3DSA:3.30.70.120 1 121 1.8E-43 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c08670 5f22d1e875bc9371440293937afe9b38 121 SMART SM00938 4 113 7.7E-41 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c02290 3390d4edc27a624b3c63c0b7fd85a3fe 379 Gene3D G3DSA:3.40.50.2000 185 354 2.7E-53 T 14-10-2018 Tph_c02290 3390d4edc27a624b3c63c0b7fd85a3fe 379 Pfam PF13439 Glycosyltransferase Family 4 18 178 1.6E-31 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c02290 3390d4edc27a624b3c63c0b7fd85a3fe 379 SUPERFAMILY SSF53756 9 377 2.9E-97 T 14-10-2018 Tph_c02290 3390d4edc27a624b3c63c0b7fd85a3fe 379 Gene3D G3DSA:3.40.50.2000 15 184 5.7E-30 T 14-10-2018 Tph_c02290 3390d4edc27a624b3c63c0b7fd85a3fe 379 Pfam PF00534 Glycosyl transferases group 1 193 352 2.6E-37 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c00320 3974e32a1889d6478539ff7d6709acba 192 Pfam PF03692 Putative zinc- or iron-chelating domain 51 135 3.7E-5 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein Tph_c06760 b236970d020cff43b2c6538ab176393b 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 1 234 4.9E-52 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06760 b236970d020cff43b2c6538ab176393b 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 160 170 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06760 b236970d020cff43b2c6538ab176393b 253 SUPERFAMILY SSF51351 1 244 5.11E-85 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06760 b236970d020cff43b2c6538ab176393b 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 1 244 52.406 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06760 b236970d020cff43b2c6538ab176393b 253 Pfam PF00121 Triosephosphate isomerase 1 242 2.0E-82 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06760 b236970d020cff43b2c6538ab176393b 253 Gene3D G3DSA:3.20.20.70 1 246 1.1E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 61 599 1.4E-244 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 SUPERFAMILY SSF143975 49 418 9.02E-141 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 Gene3D G3DSA:3.50.30.80 419 570 3.7E-58 T 14-10-2018 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 166 176 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 Pfam PF00920 Dehydratase family 78 596 2.3E-231 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 SUPERFAMILY SSF52016 419 599 7.53E-66 T 14-10-2018 Tph_c19880 ac0388b4476b7948a6e095a677c7c0a1 618 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 48 599 48.477 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 SUPERFAMILY SSF56762 201 545 8.63E-115 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 SUPERFAMILY SSF143243 17 202 5.75E-47 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 473 545 1.4E-11 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 304 472 1.1E-42 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 Pfam PF00374 Nickel-dependent hydrogenase 226 294 4.1E-15 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 94 150 2.0E-17 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 Gene3D G3DSA:3.30.460.80 22 143 9.3E-14 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 42 161 5.7E-25 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26330 a4945b06a8b3583312a440a02db9062a 578 Gene3D G3DSA:1.10.645.20 188 545 6.5E-120 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 Gene3D G3DSA:2.170.120.20 103 195 1.4E-27 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 188 27.08 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 Pfam PF01386 Ribosomal L25p family 6 97 2.7E-23 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 100 5.0E-14 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 Gene3D G3DSA:2.40.240.10 3 100 1.9E-23 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 185 6.6E-47 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 105 187 1.1E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain Tph_c28310 9f01f777d0bdc783c401f6f0edd1bebb 215 SUPERFAMILY SSF50715 3 194 6.1E-52 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 Gene3D G3DSA:2.40.50.140 1 114 4.6E-49 T 14-10-2018 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.6E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 PIRSF PIRSF002158 3 275 8.8E-102 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 4.5E-58 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 SUPERFAMILY SSF50249 3 125 2.33E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 SUPERFAMILY SSF50104 126 272 1.93E-63 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 49.764 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 Gene3D G3DSA:2.30.30.30 118 195 1.7E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 SMART SM01382 124 252 4.9E-93 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 Gene3D G3DSA:4.10.950.10 196 275 2.4E-37 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 SMART SM01383 42 118 3.1E-48 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25820 ddeed4c930cf1e24e04d99d104e89311 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 274 1.1E-138 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Tph_c12460 45427a050acf6d5867a044fc61062834 726 SUPERFAMILY SSF81301 179 391 2.45E-67 T 14-10-2018 Tph_c12460 45427a050acf6d5867a044fc61062834 726 Gene3D G3DSA:1.10.3210.10 1 190 1.1E-82 T 14-10-2018 Tph_c12460 45427a050acf6d5867a044fc61062834 726 Pfam PF13291 ACT domain 647 722 2.6E-19 T 14-10-2018 IPR002912 ACT domain Tph_c12460 45427a050acf6d5867a044fc61062834 726 Gene3D G3DSA:3.30.70.260 646 725 3.4E-15 T 14-10-2018 Tph_c12460 45427a050acf6d5867a044fc61062834 726 Gene3D G3DSA:3.10.20.30 380 451 3.0E-35 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c12460 45427a050acf6d5867a044fc61062834 726 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 25 721 1.3E-249 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 Tph_c12460 45427a050acf6d5867a044fc61062834 726 SUPERFAMILY SSF81271 374 446 1.66E-25 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tph_c12460 45427a050acf6d5867a044fc61062834 726 SMART SM00471 40 152 1.8E-9 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c12460 45427a050acf6d5867a044fc61062834 726 SUPERFAMILY SSF55021 647 724 3.32E-7 T 14-10-2018 Tph_c12460 45427a050acf6d5867a044fc61062834 726 Pfam PF04607 Region found in RelA / SpoT proteins 234 343 6.7E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Tph_c12460 45427a050acf6d5867a044fc61062834 726 Pfam PF13328 HD domain 25 174 1.9E-48 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c12460 45427a050acf6d5867a044fc61062834 726 Gene3D G3DSA:3.30.460.10 192 323 7.0E-53 T 14-10-2018 Tph_c12460 45427a050acf6d5867a044fc61062834 726 SMART SM00954 234 344 4.7E-66 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Tph_c12460 45427a050acf6d5867a044fc61062834 726 Pfam PF02824 TGS domain 387 446 3.4E-25 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Tph_c12460 45427a050acf6d5867a044fc61062834 726 SUPERFAMILY SSF109604 5 190 5.34E-73 T 14-10-2018 Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 SUPERFAMILY SSF52172 3 137 5.83E-34 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 Gene3D G3DSA:2.40.50.1020 131 230 3.0E-17 T 14-10-2018 Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 SMART SM00448 4 115 6.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 SMART SM00850 139 235 1.7E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 Pfam PF04397 LytTr DNA-binding domain 142 234 2.6E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 Gene3D G3DSA:3.40.50.2300 3 130 8.4E-35 T 14-10-2018 Tph_c17410 8366258322a59c3770b7e8e4e0629f33 237 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 SUPERFAMILY SSF52172 3 137 5.83E-34 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 Gene3D G3DSA:2.40.50.1020 131 230 3.0E-17 T 14-10-2018 Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 SMART SM00448 4 115 6.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 SMART SM00850 139 235 1.7E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 Pfam PF04397 LytTr DNA-binding domain 142 234 2.6E-22 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 Gene3D G3DSA:3.40.50.2300 3 130 8.4E-35 T 14-10-2018 Tph_c14690 8366258322a59c3770b7e8e4e0629f33 237 Pfam PF00072 Response regulator receiver domain 6 115 1.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 Pfam PF00312 Ribosomal protein S15 8 88 5.2E-39 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 SMART SM01387 8 88 5.8E-55 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 89 23.17 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-31 T 14-10-2018 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 Gene3D G3DSA:1.10.287.10 3 89 4.4E-37 T 14-10-2018 Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 SUPERFAMILY SSF47060 5 89 1.09E-37 T 14-10-2018 IPR009068 S15/NS1, RNA-binding Tph_c11360 46da118c6c1a57e581794bf54913cadf 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 7 89 9.1E-41 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 338 5.2E-19 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 SUPERFAMILY SSF52540 1 340 7.92E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 3 341 4.4E-83 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 Gene3D G3DSA:1.20.1050.90 119 308 1.1E-96 T 14-10-2018 Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 368 79.848 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 Gene3D G3DSA:3.40.50.300 5 341 1.1E-96 T 14-10-2018 Tph_c00030 7ee5a63546a083f6f432fd19dcfd5b0a 368 ProSitePatterns PS00618 RecF protein signature 2. 309 327 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 SUPERFAMILY SSF52540 2 547 1.26E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06640 384752b5ee5d997001f5919cb489488d 934 SUPERFAMILY SSF52540 597 888 2.37E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Gene3D G3DSA:1.20.1580.10 72 470 5.9E-247 T 14-10-2018 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Gene3D G3DSA:3.40.50.300 1 573 5.9E-247 T 14-10-2018 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 SMART SM00382 5 542 9.6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c06640 384752b5ee5d997001f5919cb489488d 934 SMART SM00382 609 922 6.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c06640 384752b5ee5d997001f5919cb489488d 934 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 1 901 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Gene3D G3DSA:1.20.1580.10 669 806 1.6E-143 T 14-10-2018 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Gene3D G3DSA:3.30.190.20 112 223 5.9E-247 T 14-10-2018 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Gene3D G3DSA:3.40.50.300 590 912 1.6E-143 T 14-10-2018 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Gene3D G3DSA:1.10.8.280 266 381 5.9E-247 T 14-10-2018 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 ProSitePatterns PS00211 ABC transporters family signature. 806 820 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c06640 384752b5ee5d997001f5919cb489488d 934 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 916 22.668 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Tph_c22150 8c860ce701032cb903f695ce8747d995 130 TIGRFAM TIGR00208 fliS: flagellar protein FliS 7 122 2.5E-32 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tph_c22150 8c860ce701032cb903f695ce8747d995 130 Pfam PF02561 Flagellar protein FliS 9 120 8.7E-39 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tph_c22150 8c860ce701032cb903f695ce8747d995 130 Gene3D G3DSA:1.20.120.340 2 123 6.2E-39 T 14-10-2018 Tph_c22150 8c860ce701032cb903f695ce8747d995 130 PIRSF PIRSF039090 1 130 7.4E-34 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Tph_c22150 8c860ce701032cb903f695ce8747d995 130 SUPERFAMILY SSF101116 7 122 3.27E-36 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Tph_c20470 b1374367654ca4ada0744fde84909907 401 Pfam PF12704 MacB-like periplasmic core domain 22 212 2.1E-30 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Tph_c20470 b1374367654ca4ada0744fde84909907 401 Pfam PF02687 FtsX-like permease family 307 394 8.8E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tph_c20280 200d4ab73fccc3c5cf1eb7b9948d4d6b 137 SUPERFAMILY SSF52242 3 135 1.83E-35 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c20280 200d4ab73fccc3c5cf1eb7b9948d4d6b 137 Pfam PF02310 B12 binding domain 7 124 4.7E-14 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c20280 200d4ab73fccc3c5cf1eb7b9948d4d6b 137 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 4 135 5.8E-62 T 14-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c20280 200d4ab73fccc3c5cf1eb7b9948d4d6b 137 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 38.027 T 14-10-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c20280 200d4ab73fccc3c5cf1eb7b9948d4d6b 137 Gene3D G3DSA:3.40.50.280 1 136 2.5E-39 T 14-10-2018 Tph_c18580 dbc4c463b662550cacd8bb2fcda373fe 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 118 3.5E-14 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tph_c18580 dbc4c463b662550cacd8bb2fcda373fe 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 123 21.713 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tph_c18580 dbc4c463b662550cacd8bb2fcda373fe 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 121 8.0E-25 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tph_c18580 dbc4c463b662550cacd8bb2fcda373fe 143 Gene3D G3DSA:3.90.470.20 1 122 3.7E-32 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tph_c18580 dbc4c463b662550cacd8bb2fcda373fe 143 SUPERFAMILY SSF56214 2 120 2.09E-24 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Tph_c18580 dbc4c463b662550cacd8bb2fcda373fe 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 121 5.2E-24 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 ProSitePatterns PS01071 grpE protein signature. 154 197 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 Gene3D G3DSA:3.90.20.20 4 141 1.6E-30 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 Gene3D G3DSA:2.30.22.10 143 199 9.3E-21 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 Hamap MF_01151 Protein GrpE [grpE]. 6 199 20.246 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 Pfam PF01025 GrpE 43 199 2.3E-54 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 SUPERFAMILY SSF58014 47 143 2.75E-26 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 SUPERFAMILY SSF51064 144 200 2.35E-16 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 PRINTS PR00773 GrpE protein signature 70 86 5.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 PRINTS PR00773 GrpE protein signature 98 113 5.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 PRINTS PR00773 GrpE protein signature 151 166 5.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c21120 a37743a14626810161e392f52ef3c51e 216 PRINTS PR00773 GrpE protein signature 178 197 5.9E-26 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 98 3.6E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 Pfam PF00120 Glutamine synthetase, catalytic domain 105 438 4.1E-124 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 SMART SM01230 104 352 3.5E-120 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 SUPERFAMILY SSF55931 104 440 3.24E-116 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 ProSitePatterns PS00180 Glutamine synthetase signature 1. 51 69 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 Gene3D G3DSA:3.10.20.70 2 105 1.8E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 SUPERFAMILY SSF54368 4 104 6.41E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 Gene3D G3DSA:3.30.590.10 107 442 1.3E-128 T 14-10-2018 Tph_c12980 1180a3bc13be16eff6c3573b57a7530d 442 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 440 4.4E-149 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 176 1.2E-31 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 PIRSF PIRSF006493 1 275 1.3E-86 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 SMART SM00559 52 179 1.0E-26 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 Gene3D G3DSA:2.40.290.10 3 177 4.4E-15 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 SUPERFAMILY SSF100939 2 256 8.24E-46 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 251 30.266 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Tph_c10700 0c6bcb312483c5fade9aa35b92c51e98 275 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 253 5.6E-84 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type Tph_c14950 acaf90339ec40a3ec9724f58e762c2f0 146 Gene3D G3DSA:1.10.10.10 1 88 3.0E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c14950 acaf90339ec40a3ec9724f58e762c2f0 146 Gene3D G3DSA:3.30.1490.190 91 146 2.4E-21 T 14-10-2018 Tph_c14950 acaf90339ec40a3ec9724f58e762c2f0 146 Pfam PF01475 Ferric uptake regulator family 16 136 1.3E-37 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Tph_c14950 acaf90339ec40a3ec9724f58e762c2f0 146 SUPERFAMILY SSF46785 8 140 1.63E-40 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 SUPERFAMILY SSF52540 8 247 4.06E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 Gene3D G3DSA:2.40.50.140 242 348 1.1E-11 T 14-10-2018 Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 SMART SM00382 31 214 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 Gene3D G3DSA:2.40.50.100 278 346 1.1E-11 T 14-10-2018 Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 Pfam PF08402 TOBE domain 276 351 3.5E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 Pfam PF00005 ABC transporter 22 164 1.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 Gene3D G3DSA:3.40.50.300 10 241 4.2E-65 T 14-10-2018 Tph_c01620 835d2ade72d9d9ba64818c27a32ab9f5 354 SUPERFAMILY SSF50331 241 347 1.14E-11 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 SUPERFAMILY SSF142019 100 338 3.27E-92 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Pfam PF12838 4Fe-4S dicluster domain 535 580 3.1E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 512 2.3E-32 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Gene3D G3DSA:3.40.50.11540 151 329 1.1E-82 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Gene3D G3DSA:3.30.70.20 528 583 4.6E-12 T 14-10-2018 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Pfam PF10531 SLBB domain 341 389 7.1E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 SUPERFAMILY SSF142984 339 422 1.15E-23 T 14-10-2018 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 536 547 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Gene3D G3DSA:1.20.1440.230 425 525 7.0E-34 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 SUPERFAMILY SSF52833 2 91 3.91E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 SUPERFAMILY SSF140490 423 525 1.83E-37 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 SMART SM00928 427 472 4.9E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Gene3D G3DSA:3.10.20.600 330 424 1.9E-32 T 14-10-2018 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Gene3D G3DSA:3.40.30.10 3 98 2.1E-16 T 14-10-2018 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 SUPERFAMILY SSF54862 530 583 2.72E-13 T 14-10-2018 Tph_c21670 5fcc8ce0162c29bfb7e61d1ca79d08dd 584 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 317 4.8E-49 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c02230 a2de1fe425784e9c332eaa2da82e13fd 362 Gene3D G3DSA:2.40.30.40 75 162 2.6E-128 T 14-10-2018 IPR023367 Peptidase M42, domain 2 Tph_c02230 a2de1fe425784e9c332eaa2da82e13fd 362 Gene3D G3DSA:3.40.630.10 10 345 2.6E-128 T 14-10-2018 Tph_c02230 a2de1fe425784e9c332eaa2da82e13fd 362 SUPERFAMILY SSF53187 5 352 3.63E-72 T 14-10-2018 Tph_c02230 a2de1fe425784e9c332eaa2da82e13fd 362 SUPERFAMILY SSF101821 71 180 5.04E-28 T 14-10-2018 Tph_c02230 a2de1fe425784e9c332eaa2da82e13fd 362 PIRSF PIRSF001123 2 361 4.3E-137 T 14-10-2018 IPR008007 Peptidase M42 Tph_c02230 a2de1fe425784e9c332eaa2da82e13fd 362 Pfam PF05343 M42 glutamyl aminopeptidase 46 342 1.9E-109 T 14-10-2018 IPR008007 Peptidase M42 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 SUPERFAMILY SSF51569 2 324 1.29E-141 T 14-10-2018 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 5.0E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 5.0E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 5.0E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 5.0E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 5.0E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 5.0E-59 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 SMART SM01004 3 322 1.1E-230 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 PIRSF PIRSF001415 1 325 3.2E-151 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 321 1.8E-149 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Tph_c15300 7bf2d85b886451c44d91853030306f8b 325 Gene3D G3DSA:3.20.20.70 2 325 3.2E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 Gene3D G3DSA:3.90.700.10 244 361 3.5E-100 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 SUPERFAMILY SSF51905 5 425 1.65E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 Pfam PF00890 FAD binding domain 10 405 6.7E-50 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 Gene3D G3DSA:1.20.58.100 441 539 8.0E-15 T 14-10-2018 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 PIRSF PIRSF000171 1 424 2.3E-34 T 14-10-2018 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 PIRSF PIRSF000171 492 552 9.1E-4 T 14-10-2018 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 Gene3D G3DSA:3.50.50.60 10 416 3.5E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 369 391 4.1E-9 T 14-10-2018 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 4.1E-9 T 14-10-2018 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 SUPERFAMILY SSF46977 467 550 4.19E-19 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c24010 8442e6dfc3cc28e4e4354712eee6cc14 552 Pfam PF02910 Fumarate reductase flavoprotein C-term 495 545 1.8E-8 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 Gene3D G3DSA:2.40.30.10 360 457 1.8E-12 T 14-10-2018 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 SUPERFAMILY SSF63380 358 460 3.58E-15 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 594 626 4.9E-6 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 519 7.2E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 470 489 7.2E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 496 505 7.2E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 Gene3D G3DSA:3.40.50.80 461 593 4.4E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 Pfam PF17179 4Fe-4S dicluster domain 230 325 4.4E-32 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 231 242 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00406 Cytochrome B5 reductase signature 508 519 8.2E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00406 Cytochrome B5 reductase signature 446 460 8.2E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00406 Cytochrome B5 reductase signature 470 489 8.2E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 PRINTS PR00406 Cytochrome B5 reductase signature 562 570 8.2E-6 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 SUPERFAMILY SSF52343 455 626 3.14E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 SUPERFAMILY SSF46548 217 333 2.44E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c26930 25a694ac8e6ba776569317355a1e0619 634 Pfam PF00175 Oxidoreductase NAD-binding domain 471 575 3.6E-12 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Tph_c03970 df11557c5c38864038d4623235a612c8 445 SUPERFAMILY SSF141322 380 444 2.75E-14 T 14-10-2018 Tph_c03970 df11557c5c38864038d4623235a612c8 445 Gene3D G3DSA:3.90.226.10 34 258 2.2E-53 T 14-10-2018 Tph_c03970 df11557c5c38864038d4623235a612c8 445 Pfam PF01957 NfeD-like C-terminal, partner-binding 307 444 1.4E-35 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain Tph_c03970 df11557c5c38864038d4623235a612c8 445 SUPERFAMILY SSF52096 24 202 5.92E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c03970 df11557c5c38864038d4623235a612c8 445 Pfam PF00574 Clp protease 75 202 4.4E-6 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tph_c03970 df11557c5c38864038d4623235a612c8 445 Gene3D G3DSA:2.40.50.140 383 445 2.1E-20 T 14-10-2018 Tph_c23050 eaa9187e99b0c440bd395b1068d0ce91 404 Gene3D G3DSA:2.60.120.260 165 319 2.4E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Tph_c23050 eaa9187e99b0c440bd395b1068d0ce91 404 Gene3D G3DSA:2.40.30.200 1 130 1.0E-17 T 14-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily Tph_c23050 eaa9187e99b0c440bd395b1068d0ce91 404 SUPERFAMILY SSF49785 170 318 1.19E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Tph_c23050 eaa9187e99b0c440bd395b1068d0ce91 404 Pfam PF05709 Phage tail protein 22 403 7.9E-29 T 14-10-2018 IPR008841 Siphovirus-type tail component Tph_c23050 eaa9187e99b0c440bd395b1068d0ce91 404 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 4 129 8.7E-14 T 14-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal Tph_c12720 45bd36fc80273b3986356e98e7775816 241 SUPERFAMILY SSF88946 15 134 6.91E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 Pfam PF04545 Sigma-70, region 4 183 235 9.2E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 Gene3D G3DSA:1.10.10.10 176 239 4.2E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c12720 45bd36fc80273b3986356e98e7775816 241 SUPERFAMILY SSF88659 145 238 2.99E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c12720 45bd36fc80273b3986356e98e7775816 241 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 88 101 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 61 236 8.4E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 PIRSF PIRSF000770 10 241 6.3E-71 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 18 238 1.3E-123 T 14-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 Gene3D G3DSA:1.10.601.10 35 134 1.2E-24 T 14-10-2018 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 PRINTS PR00046 Major sigma-70 factor signature 88 101 2.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 PRINTS PR00046 Major sigma-70 factor signature 186 198 2.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 Pfam PF04542 Sigma-70 region 2 64 134 2.5E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c12720 45bd36fc80273b3986356e98e7775816 241 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 207 233 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c28800 9e65ff96ef858a6f832f55f365eec555 490 Gene3D G3DSA:3.90.100.10 405 488 1.5E-16 T 14-10-2018 Tph_c28800 9e65ff96ef858a6f832f55f365eec555 490 Gene3D G3DSA:3.40.640.10 13 290 9.3E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c28800 9e65ff96ef858a6f832f55f365eec555 490 SUPERFAMILY SSF53383 14 387 7.53E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c28800 9e65ff96ef858a6f832f55f365eec555 490 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 410 478 5.1E-9 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 Tph_c28800 9e65ff96ef858a6f832f55f365eec555 490 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 14 307 2.2E-60 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 Tph_c28800 9e65ff96ef858a6f832f55f365eec555 490 SUPERFAMILY SSF55904 347 486 6.54E-29 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 Tph_c09750 51f480045bbb268e73a0e0d70d6674ae 329 Gene3D G3DSA:1.20.1420.30 33 315 3.4E-36 T 14-10-2018 Tph_c09750 51f480045bbb268e73a0e0d70d6674ae 329 Gene3D G3DSA:1.20.58.1130 7 220 3.4E-36 T 14-10-2018 Tph_c09750 51f480045bbb268e73a0e0d70d6674ae 329 Pfam PF01699 Sodium/calcium exchanger protein 2 158 1.7E-9 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tph_c09750 51f480045bbb268e73a0e0d70d6674ae 329 Pfam PF01699 Sodium/calcium exchanger protein 190 328 5.4E-12 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.10.20.740 4 120 2.3E-35 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Pfam PF00384 Molybdopterin oxidoreductase 738 864 2.4E-8 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 SMART SM00926 687 737 0.0054 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.40.50.740 971 1102 2.8E-10 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.40.50.740 747 810 1.3E-12 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.40.228.10 811 862 1.3E-12 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 SUPERFAMILY SSF54292 5 101 4.3E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 PRINTS PR00419 Adrenodoxin reductase family signature 195 217 8.9E-21 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 PRINTS PR00419 Adrenodoxin reductase family signature 326 340 8.9E-21 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 PRINTS PR00419 Adrenodoxin reductase family signature 218 231 8.9E-21 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 PRINTS PR00419 Adrenodoxin reductase family signature 260 270 8.9E-21 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 SUPERFAMILY SSF54862 563 677 8.12E-23 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 SUPERFAMILY SSF51971 192 437 1.0E-69 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.30.70.20 594 676 6.4E-23 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 SUPERFAMILY SSF46548 98 204 1.62E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Pfam PF00037 4Fe-4S binding domain 654 673 1.6E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08060 c814bab23092a64352ae96e03a759156 1131 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 658 669 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 194 489 9.4E-36 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 100 176 1.6E-16 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.50.50.60 321 522 4.1E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:3.50.50.60 191 313 1.8E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c08060 c814bab23092a64352ae96e03a759156 1131 SUPERFAMILY SSF53706 688 1089 9.68E-59 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.9E-17 T 14-10-2018 Tph_c08060 c814bab23092a64352ae96e03a759156 1131 Gene3D G3DSA:2.20.25.90 687 735 1.5E-6 T 14-10-2018 Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 Pfam PF06971 Putative DNA-binding protein N-terminus 5 52 1.4E-19 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 SUPERFAMILY SSF51735 82 204 9.0E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 Gene3D G3DSA:1.10.10.10 2 78 5.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 Pfam PF02629 CoA binding domain 84 179 5.3E-21 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 SUPERFAMILY SSF46785 7 79 2.09E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 SMART SM00881 80 180 3.8E-24 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 209 33.604 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 Tph_c05930 c8ee14976692733b8749cd7bb96150b3 218 Gene3D G3DSA:3.40.50.720 79 218 2.1E-45 T 14-10-2018 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 9 407 8.8E-152 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 51 407 1.0E-115 T 14-10-2018 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 Gene3D G3DSA:3.10.20.340 279 407 1.1E-45 T 14-10-2018 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 Pfam PF01960 ArgJ family 21 407 1.5E-154 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 407 160.01 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 Gene3D G3DSA:3.60.70.12 2 193 1.3E-72 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 SUPERFAMILY SSF56266 16 403 3.27E-143 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c25470 7330d7d8b8ef0c84965bd844bfcafd3f 407 Gene3D G3DSA:3.30.2330.10 194 278 9.5E-31 T 14-10-2018 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 Gene3D G3DSA:3.30.70.3460 395 478 5.7E-27 T 14-10-2018 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 Pfam PF13186 Iron-sulfur cluster-binding domain 236 295 5.1E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 Pfam PF13353 4Fe-4S single cluster domain 9 87 1.4E-6 T 14-10-2018 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 SUPERFAMILY SSF102114 3 302 9.55E-76 T 14-10-2018 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 TIGRFAM TIGR04055 rSAM_NirJ2: putative heme d1 biosynthesis radical SAM protein NirJ2 2 324 4.6E-154 T 14-10-2018 IPR027633 Putative heme D1 biosynthesis radical SAM protein NirJ2 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 SMART SM00729 1 202 2.6E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 Gene3D G3DSA:3.20.20.70 2 284 1.0E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 Pfam PF04055 Radical SAM superfamily 6 157 2.0E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c15290 8fb223918bd27e7a1915311a7ca9b9ca 498 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 236 310 2.3E-12 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SMART SM00322 551 615 9.8E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 318 1.5E-13 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SUPERFAMILY SSF55666 145 236 8.38E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 696 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF00575 S1 RNA binding domain 618 695 1.6E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Gene3D G3DSA:2.40.50.140 621 697 4.5E-25 T 14-10-2018 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Gene3D G3DSA:3.30.1370.10 549 620 3.8E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SUPERFAMILY SSF55666 449 547 1.96E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 698 31.732 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SUPERFAMILY SSF50249 617 698 1.09E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Gene3D G3DSA:3.30.230.70 235 548 3.2E-121 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF00013 KH domain 555 612 3.1E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 PIRSF PIRSF005499 1 707 6.8E-303 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SUPERFAMILY SSF54211 291 486 7.09E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF03725 3' exoribonuclease family, domain 2 458 527 1.1E-5 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.0E-14 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Gene3D G3DSA:3.30.230.70 1 230 1.5E-87 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SMART SM00316 619 695 4.0E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SUPERFAMILY SSF54211 5 144 9.62E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 SUPERFAMILY SSF54791 553 639 1.52E-24 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 2.3E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c11370 b54adfde0584cd7fbe35d6dc665e2610 707 Pfam PF01138 3' exoribonuclease family, domain 1 322 455 2.8E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 SUPERFAMILY SSF103263 2 390 2.09E-135 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 Hamap MF_00300 Chorismate synthase [aroC]. 2 374 35.086 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 Gene3D G3DSA:3.60.150.10 1 392 6.9E-152 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 Pfam PF01264 Chorismate synthase 2 366 8.9E-117 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 ProSitePatterns PS00788 Chorismate synthase signature 2. 132 148 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 PIRSF PIRSF001456 1 384 9.9E-123 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 ProSitePatterns PS00789 Chorismate synthase signature 3. 341 357 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 TIGRFAM TIGR00033 aroC: chorismate synthase 2 372 9.4E-121 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c16690 6ef57ba93bbf4f0b4dc7c691ce1110d2 392 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Gene3D G3DSA:3.30.420.10 293 481 4.5E-30 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 640 663 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 731 742 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 828 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 670 683 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 594 616 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 785 801 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 617 632 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 694 719 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 753 764 2.9E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Gene3D G3DSA:3.40.50.1010 1 272 7.0E-98 T 14-10-2018 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Pfam PF00476 DNA polymerase family A 491 866 1.1E-155 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Gene3D G3DSA:1.10.150.20 169 241 7.0E-98 T 14-10-2018 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SUPERFAMILY SSF53098 299 458 1.52E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Gene3D G3DSA:1.20.1060.10 483 597 1.1E-42 T 14-10-2018 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 259 1.4E-30 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SMART SM00279 168 203 1.2E-14 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Gene3D G3DSA:3.30.70.370 603 864 4.3E-109 T 14-10-2018 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SUPERFAMILY SSF88723 1 165 3.92E-48 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SUPERFAMILY SSF56672 462 867 7.89E-156 T 14-10-2018 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 1 165 5.0E-50 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Pfam PF01612 3'-5' exonuclease 298 440 2.1E-4 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SMART SM00482 625 832 8.5E-116 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 Gene3D G3DSA:1.10.150.20 649 792 4.3E-109 T 14-10-2018 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 TIGRFAM TIGR00593 pola: DNA polymerase I 1 867 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SUPERFAMILY SSF47807 166 279 2.84E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Tph_c18090 bfb78b74d716dd7bff8572fa81edea74 875 SMART SM00475 1 256 1.5E-122 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 Hamap MF_00372 Imidazolonepropionase [hutI]. 7 420 43.89 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 SUPERFAMILY SSF51556 81 381 2.84E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 TIGRFAM TIGR01224 hutI: imidazolonepropionase 39 419 1.4E-146 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 Gene3D G3DSA:3.20.20.140 82 380 1.4E-173 T 14-10-2018 Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 Pfam PF01979 Amidohydrolase family 78 420 1.3E-19 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 SUPERFAMILY SSF51338 7 422 1.28E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c20450 65731d7952e7b5e359a712db4590ca36 423 Gene3D G3DSA:2.30.40.10 11 418 1.4E-173 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c16890 f110e4d6d51980c9cb33e6db82307cd7 488 Pfam PF07501 G5 domain 376 445 1.6E-13 T 14-10-2018 IPR011098 G5 domain Tph_c16890 f110e4d6d51980c9cb33e6db82307cd7 488 Gene3D G3DSA:2.20.230.10 357 445 2.2E-11 T 14-10-2018 Tph_c16890 f110e4d6d51980c9cb33e6db82307cd7 488 Pfam PF04294 VanW like protein 235 362 4.0E-54 T 14-10-2018 IPR007391 Vancomycin resistance VanW Tph_c16890 f110e4d6d51980c9cb33e6db82307cd7 488 Pfam PF12229 Putative peptidoglycan binding domain 81 185 8.4E-14 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain Tph_c16890 f110e4d6d51980c9cb33e6db82307cd7 488 SMART SM01208 370 446 5.9E-16 T 14-10-2018 IPR011098 G5 domain Tph_c01820 2113c03fe457155702d88916261b2823 357 Pfam PF07833 Copper amine oxidase N-terminal domain 264 352 4.0E-31 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c01820 2113c03fe457155702d88916261b2823 357 Gene3D G3DSA:3.30.457.10 268 346 1.5E-25 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c01820 2113c03fe457155702d88916261b2823 357 SUPERFAMILY SSF55383 267 350 6.15E-27 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c07480 0649aa82568a0ab12bd799bbaed710ae 211 SUPERFAMILY SSF140931 53 206 3.01E-34 T 14-10-2018 IPR036597 Fido-like domain superfamily Tph_c07480 0649aa82568a0ab12bd799bbaed710ae 211 Pfam PF02661 Fic/DOC family 59 156 2.6E-15 T 14-10-2018 IPR003812 Fido domain Tph_c07480 0649aa82568a0ab12bd799bbaed710ae 211 Gene3D G3DSA:1.10.3290.10 5 210 1.1E-69 T 14-10-2018 IPR036597 Fido-like domain superfamily Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 SMART SM00863 652 695 3.9E-20 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 2.9E-17 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 SUPERFAMILY SSF101353 243 439 3.53E-65 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 3.0E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 3.0E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 196 207 3.0E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 223 236 3.0E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 71 82 3.0E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Gene3D G3DSA:2.40.30.130 476 550 2.6E-11 T 14-10-2018 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 855 5.6E-293 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 175.878 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Pfam PF01411 tRNA synthetases class II (A) 6 554 4.7E-203 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 SUPERFAMILY SSF50447 452 551 6.64E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 SUPERFAMILY SSF55681 5 242 3.98E-98 T 14-10-2018 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Gene3D G3DSA:3.30.980.10 556 694 7.9E-49 T 14-10-2018 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 SUPERFAMILY SSF55186 551 709 9.94E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Gene3D G3DSA:3.30.54.20 623 676 7.9E-49 T 14-10-2018 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Gene3D G3DSA:3.10.310.40 763 873 5.0E-31 T 14-10-2018 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Gene3D G3DSA:3.30.930.10 3 239 2.4E-103 T 14-10-2018 Tph_c16940 93cb5c0ee67925dd610cadfcb60511fc 878 Pfam PF02272 DHHA1 domain 733 870 1.1E-18 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 Gene3D G3DSA:1.20.272.10 203 326 2.0E-34 T 14-10-2018 Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 Gene3D G3DSA:1.10.8.60 135 202 6.6E-6 T 14-10-2018 Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 Pfam PF06144 DNA polymerase III, delta subunit 24 181 4.9E-12 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 SUPERFAMILY SSF48019 206 325 3.23E-28 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 Gene3D G3DSA:3.40.50.300 7 130 1.8E-9 T 14-10-2018 Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 SUPERFAMILY SSF52540 6 198 2.18E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21250 33e62fc3a43c10add0fc0527d6361ff0 326 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 19 325 6.5E-51 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 Tph_c20570 7416bf3543d0d2f1a4f4ab0d07a40a76 133 Pfam PF02082 Transcriptional regulator 1 67 5.5E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tph_c20570 7416bf3543d0d2f1a4f4ab0d07a40a76 133 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 118 2.7E-38 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tph_c20570 7416bf3543d0d2f1a4f4ab0d07a40a76 133 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 33 51 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Tph_c20570 7416bf3543d0d2f1a4f4ab0d07a40a76 133 SUPERFAMILY SSF46785 4 119 1.22E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c20570 7416bf3543d0d2f1a4f4ab0d07a40a76 133 Gene3D G3DSA:1.10.10.10 1 133 7.9E-53 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c18980 ba3755839c47023fcbe3ac6b22258bc2 309 Gene3D G3DSA:3.100.10.20 1 54 1.5E-9 T 14-10-2018 Tph_c18980 ba3755839c47023fcbe3ac6b22258bc2 309 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 1 294 21.586 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tph_c18980 ba3755839c47023fcbe3ac6b22258bc2 309 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 304 2.0E-75 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tph_c18980 ba3755839c47023fcbe3ac6b22258bc2 309 Pfam PF01867 CRISPR associated protein Cas1 3 262 1.1E-68 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tph_c18980 ba3755839c47023fcbe3ac6b22258bc2 309 Gene3D G3DSA:1.20.120.920 57 309 1.9E-74 T 14-10-2018 Tph_c03450 89cf01fd0a2aca70f0146ad9713e305a 354 Pfam PF04055 Radical SAM superfamily 13 164 1.5E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c03450 89cf01fd0a2aca70f0146ad9713e305a 354 SMART SM00729 8 208 0.0088 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c03450 89cf01fd0a2aca70f0146ad9713e305a 354 Pfam PF13353 4Fe-4S single cluster domain 15 107 2.1E-7 T 14-10-2018 Tph_c03450 89cf01fd0a2aca70f0146ad9713e305a 354 Gene3D G3DSA:3.20.20.70 5 348 1.1E-56 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c03450 89cf01fd0a2aca70f0146ad9713e305a 354 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 247 323 3.6E-12 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c03450 89cf01fd0a2aca70f0146ad9713e305a 354 SUPERFAMILY SSF102114 6 316 4.84E-46 T 14-10-2018 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 Gene3D G3DSA:3.30.70.890 164 290 3.7E-44 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 PRINTS PR00958 Homoserine kinase signature 13 28 2.9E-40 T 14-10-2018 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 PRINTS PR00958 Homoserine kinase signature 249 264 2.9E-40 T 14-10-2018 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 PRINTS PR00958 Homoserine kinase signature 131 144 2.9E-40 T 14-10-2018 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 PRINTS PR00958 Homoserine kinase signature 97 112 2.9E-40 T 14-10-2018 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 PRINTS PR00958 Homoserine kinase signature 170 187 2.9E-40 T 14-10-2018 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 Gene3D G3DSA:3.30.230.10 5 163 4.8E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 SUPERFAMILY SSF55060 165 269 2.52E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 SUPERFAMILY SSF54211 6 153 2.2E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 PIRSF PIRSF000676 2 301 2.3E-92 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 TIGRFAM TIGR00191 thrB: homoserine kinase 7 299 3.4E-88 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 Pfam PF08544 GHMP kinases C terminal 206 268 8.5E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 Pfam PF00288 GHMP kinases N terminal domain 84 144 5.5E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Tph_c15540 8c09b4e2eb5a1923a1f06c6e9ae479d5 302 Hamap MF_00384 Homoserine kinase [thrB]. 8 301 32.718 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Tph_c18650 0daaf0f988649d47202e39f51b392a48 220 Pfam PF14681 Uracil phosphoribosyltransferase 8 213 1.3E-58 T 14-10-2018 Tph_c18650 0daaf0f988649d47202e39f51b392a48 220 SUPERFAMILY SSF53271 6 211 2.41E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c18650 0daaf0f988649d47202e39f51b392a48 220 Gene3D G3DSA:3.40.50.2020 5 213 5.2E-60 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 424 4.1E-168 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Gene3D G3DSA:1.20.200.10 93 348 7.2E-100 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Gene3D G3DSA:3.30.470.20 537 672 5.6E-92 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Pfam PF01259 SAICAR synthetase 459 682 7.6E-65 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 426 1.8E-23 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Gene3D G3DSA:1.10.275.10 1 92 1.2E-33 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Tph_c08430 f47ff52dc949f570da5f918315094476 691 SMART SM00998 349 428 3.3E-32 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 SUPERFAMILY SSF48557 3 424 1.01E-137 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 9.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 9.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 9.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 9.7E-28 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c08430 f47ff52dc949f570da5f918315094476 691 Gene3D G3DSA:1.10.40.30 349 431 6.0E-27 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 SUPERFAMILY SSF56104 455 688 3.92E-81 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Pfam PF00206 Lyase 7 284 4.7E-66 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Tph_c08430 f47ff52dc949f570da5f918315094476 691 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 455 684 1.7E-73 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Gene3D G3DSA:3.30.200.20 459 683 5.6E-92 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 ProSitePatterns PS01057 SAICAR synthetase signature 1. 538 552 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tph_c08430 f47ff52dc949f570da5f918315094476 691 ProSitePatterns PS01058 SAICAR synthetase signature 2. 625 633 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 456 686 32.675 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.7E-12 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.7E-12 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.7E-12 T 14-10-2018 Tph_c08430 f47ff52dc949f570da5f918315094476 691 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.7E-12 T 14-10-2018 Tph_c09100 38a319fd066bb9884e32b2e516e73e7c 391 Gene3D G3DSA:3.20.20.210 9 387 1.9E-56 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tph_c09100 38a319fd066bb9884e32b2e516e73e7c 391 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 168 387 1.5E-26 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tph_c09100 38a319fd066bb9884e32b2e516e73e7c 391 SUPERFAMILY SSF51726 11 390 1.01E-46 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tph_c08210 99c0fd9f37bca08b6724b262726dbe04 160 Pfam PF13247 4Fe-4S dicluster domain 49 133 4.3E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08210 99c0fd9f37bca08b6724b262726dbe04 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08210 99c0fd9f37bca08b6724b262726dbe04 160 Pfam PF12800 4Fe-4S binding domain 9 24 0.018 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08210 99c0fd9f37bca08b6724b262726dbe04 160 Gene3D G3DSA:3.30.70.20 40 157 6.8E-25 T 14-10-2018 Tph_c08210 99c0fd9f37bca08b6724b262726dbe04 160 SUPERFAMILY SSF54862 4 136 7.87E-39 T 14-10-2018 Tph_c04170 99c0fd9f37bca08b6724b262726dbe04 160 Pfam PF13247 4Fe-4S dicluster domain 49 133 4.3E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c04170 99c0fd9f37bca08b6724b262726dbe04 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c04170 99c0fd9f37bca08b6724b262726dbe04 160 Pfam PF12800 4Fe-4S binding domain 9 24 0.018 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c04170 99c0fd9f37bca08b6724b262726dbe04 160 Gene3D G3DSA:3.30.70.20 40 157 6.8E-25 T 14-10-2018 Tph_c04170 99c0fd9f37bca08b6724b262726dbe04 160 SUPERFAMILY SSF54862 4 136 7.87E-39 T 14-10-2018 Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 160 8.4E-20 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 SUPERFAMILY SSF50891 181 299 5.31E-30 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 155 1.4E-22 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 SUPERFAMILY SSF56300 1 175 2.12E-26 T 14-10-2018 Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 Gene3D G3DSA:3.60.21.10 1 176 3.1E-32 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 Pfam PF04126 Cyclophilin-like 180 297 1.5E-42 T 14-10-2018 IPR025658 Cyclophilin TM1367-like domain Tph_c16750 686defb7caafb342ee7af77b4e9bffa5 301 Gene3D G3DSA:2.40.100.20 177 300 5.3E-44 T 14-10-2018 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Gene3D G3DSA:3.90.105.10 33 183 1.1E-98 T 14-10-2018 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 1.9E-29 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Gene3D G3DSA:3.40.980.10 184 326 1.1E-98 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 SUPERFAMILY SSF53218 186 328 3.66E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Gene3D G3DSA:2.40.340.10 339 413 2.3E-21 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 176 4.4E-38 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 SUPERFAMILY SSF63867 340 413 4.58E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Pfam PF00994 Probable molybdopterin binding domain 189 327 4.1E-27 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 SUPERFAMILY SSF63882 8 183 1.83E-46 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Pfam PF03454 MoeA C-terminal region (domain IV) 342 412 2.2E-17 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 SMART SM00852 189 328 2.4E-41 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08310 9eb62c443b1fec945a85e58e06840c58 418 Gene3D G3DSA:2.170.190.11 53 150 1.1E-98 T 14-10-2018 Tph_c16720 f56431aacaec4dc5c34c064fc27805e0 122 Pfam PF00072 Response regulator receiver domain 4 115 1.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c16720 f56431aacaec4dc5c34c064fc27805e0 122 SUPERFAMILY SSF52172 2 120 1.15E-33 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c16720 f56431aacaec4dc5c34c064fc27805e0 122 Gene3D G3DSA:3.40.50.2300 2 121 2.6E-33 T 14-10-2018 Tph_c16720 f56431aacaec4dc5c34c064fc27805e0 122 SMART SM00448 2 115 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 Pfam PF00347 Ribosomal protein L6 90 164 2.1E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 Pfam PF00347 Ribosomal protein L6 11 82 4.6E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-74 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 Gene3D G3DSA:3.90.930.12 1 82 2.2E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 PRINTS PR00059 Ribosomal protein L6 signature 141 162 7.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.3E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.692 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 SUPERFAMILY SSF56053 1 82 2.52E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 Gene3D G3DSA:3.90.930.12 83 178 1.5E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 SUPERFAMILY SSF56053 83 176 7.48E-33 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25700 b2a168aaa9b2120fb9ad9b2626fff52a 181 PIRSF PIRSF002162 1 177 4.9E-48 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 Gene3D G3DSA:1.10.10.10 11 90 6.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 Pfam PF16864 Dimerisation domain 18 99 6.7E-21 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 Pfam PF00891 O-methyltransferase 144 308 6.6E-19 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 SUPERFAMILY SSF46785 16 91 2.35E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 Gene3D G3DSA:3.40.50.150 98 343 7.3E-45 T 14-10-2018 Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 SUPERFAMILY SSF53335 112 330 6.03E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c05610 e5ce8fc4f82fa5c47044c9f69d90f906 516 Pfam PF10050 Predicted metal-binding protein (DUF2284) 370 515 5.4E-38 T 14-10-2018 IPR019271 Protein of unknown function DUF2284, metal-binding Tph_c21240 09bf0d804def7e39a18c771a3ece5dd3 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 17 85 1.0E-14 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21240 09bf0d804def7e39a18c771a3ece5dd3 88 SUPERFAMILY SSF46992 3 86 4.97E-28 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21240 09bf0d804def7e39a18c771a3ece5dd3 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 6.5E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21240 09bf0d804def7e39a18c771a3ece5dd3 88 Gene3D G3DSA:1.20.58.110 1 86 1.2E-29 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21240 09bf0d804def7e39a18c771a3ece5dd3 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.634 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21240 09bf0d804def7e39a18c771a3ece5dd3 88 Pfam PF01649 Ribosomal protein S20 2 84 3.4E-28 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 Pfam PF00472 RF-1 domain 210 319 3.7E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 Pfam PF03462 PCRF domain 10 202 6.4E-74 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 SMART SM00937 62 177 1.3E-64 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 41.091 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 Gene3D G3DSA:3.30.160.20 209 295 1.3E-98 T 14-10-2018 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 Gene3D G3DSA:3.30.70.1660 110 340 1.3E-98 T 14-10-2018 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 SUPERFAMILY SSF75620 8 351 1.22E-135 T 14-10-2018 Tph_c27560 9579ee6248f60100fe35c28cca8c6050 363 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 354 5.3E-168 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Tph_c07060 f22b481e3722ec62168ec4f9b74ff66a 105 SMART SM00877 6 82 3.2E-33 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c07060 f22b481e3722ec62168ec4f9b74ff66a 105 Gene3D G3DSA:3.30.70.1710 1 105 3.0E-39 T 14-10-2018 Tph_c07060 f22b481e3722ec62168ec4f9b74ff66a 105 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 7 31 2.0E-5 T 14-10-2018 Tph_c07060 f22b481e3722ec62168ec4f9b74ff66a 105 Pfam PF00936 BMC domain 7 82 4.6E-27 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c07060 f22b481e3722ec62168ec4f9b74ff66a 105 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 24 43 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Tph_c07060 f22b481e3722ec62168ec4f9b74ff66a 105 SUPERFAMILY SSF143414 7 97 3.66E-31 T 14-10-2018 IPR037233 CcmK-like superfamily Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 SMART SM00895 84 208 5.2E-27 T 14-10-2018 IPR011711 GntR, C-terminal Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 SUPERFAMILY SSF48008 80 216 6.8E-37 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 7.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 Pfam PF07729 FCD domain 84 207 5.4E-35 T 14-10-2018 IPR011711 GntR, C-terminal Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 SUPERFAMILY SSF46785 7 101 7.44E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 Gene3D G3DSA:1.20.120.530 78 223 2.3E-38 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 45 64 1.3E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 45 1.3E-5 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 Gene3D G3DSA:1.10.10.10 9 75 1.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 SMART SM00345 16 74 3.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c28370 7df97922e1674c06d7f25d25c3a40c09 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.5E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c24390 bf8bc6fa9e2437ca0f05584f00981692 330 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 325 9.0E-97 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tph_c24390 bf8bc6fa9e2437ca0f05584f00981692 330 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 3 330 2.1E-139 T 14-10-2018 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype GO:0004520|GO:0043571|GO:0046872 Tph_c24390 bf8bc6fa9e2437ca0f05584f00981692 330 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 315 25.523 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tph_c24390 bf8bc6fa9e2437ca0f05584f00981692 330 Gene3D G3DSA:1.20.120.920 82 330 5.2E-72 T 14-10-2018 Tph_c24390 bf8bc6fa9e2437ca0f05584f00981692 330 Pfam PF01867 CRISPR associated protein Cas1 5 285 4.0E-90 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Tph_c24390 bf8bc6fa9e2437ca0f05584f00981692 330 Gene3D G3DSA:3.100.10.20 1 81 8.1E-28 T 14-10-2018 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 SUPERFAMILY SSF53738 10 202 6.67E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Gene3D G3DSA:3.30.310.50 397 483 3.1E-21 T 14-10-2018 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 282 393 1.3E-28 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Gene3D G3DSA:3.40.120.10 197 277 1.1E-19 T 14-10-2018 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Gene3D G3DSA:3.40.120.10 278 395 1.3E-41 T 14-10-2018 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 SUPERFAMILY SSF53738 265 398 9.81E-34 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 109 118 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 178 276 6.4E-22 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Gene3D G3DSA:3.40.120.10 3 187 1.1E-53 T 14-10-2018 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 16 149 1.2E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 SUPERFAMILY SSF55957 387 481 9.81E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 405 478 4.6E-15 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 257 272 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 108 122 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 229 242 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c05400 94a01713eb9294f3f65ce01def7585db 485 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 195 214 8.9E-15 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 SUPERFAMILY SSF53706 4 602 5.76E-157 T 14-10-2018 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 445 462 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Gene3D G3DSA:3.40.228.10 143 335 8.7E-178 T 14-10-2018 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Gene3D G3DSA:3.40.50.740 61 533 8.7E-178 T 14-10-2018 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Gene3D G3DSA:2.20.25.90 1 60 7.6E-13 T 14-10-2018 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Pfam PF01568 Molydopterin dinucleotide binding domain 614 702 1.8E-14 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 SUPERFAMILY SSF50692 555 724 1.06E-24 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Gene3D G3DSA:2.40.40.20 571 724 9.4E-34 T 14-10-2018 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 SMART SM00926 2 56 2.0E-7 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 55 2.0E-9 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01240 f2476fe5c24e52679e7a27b86d9924d8 728 Pfam PF00384 Molybdopterin oxidoreductase 59 499 6.6E-56 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 3 410 1.4E-148 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 Pfam PF13393 Histidyl-tRNA synthetase 7 309 9.4E-47 T 14-10-2018 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 SUPERFAMILY SSF52954 338 420 3.32E-19 T 14-10-2018 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 Gene3D G3DSA:3.40.50.800 327 419 6.5E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 32.526 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 Gene3D G3DSA:3.30.930.10 1 319 2.1E-116 T 14-10-2018 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 SUPERFAMILY SSF55681 2 316 3.45E-100 T 14-10-2018 Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 Pfam PF03129 Anticodon binding domain 335 420 1.3E-12 T 14-10-2018 IPR004154 Anticodon-binding Tph_c12490 604db50c9296687a12ac4b3cd72f7d44 428 PIRSF PIRSF001549 1 422 1.4E-121 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 Pfam PF02154 Flagellar motor switch protein FliM 39 230 2.7E-66 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 3.2E-28 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 3.2E-28 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 3.2E-28 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 3.2E-28 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 Gene3D G3DSA:2.30.330.10 244 330 2.0E-9 T 14-10-2018 IPR036429 SpoA-like superfamily Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 324 7.3E-22 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 SUPERFAMILY SSF101801 251 327 1.96E-17 T 14-10-2018 IPR036429 SpoA-like superfamily Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 322 2.0E-101 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 SUPERFAMILY SSF103039 45 231 2.88E-28 T 14-10-2018 IPR028976 CheC-like superfamily Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 PIRSF PIRSF002888 1 329 4.0E-108 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Tph_c10940 9e1165b1ba1c14228c1953f92d4cf731 333 Gene3D G3DSA:3.40.1550.10 44 232 2.7E-61 T 14-10-2018 IPR028976 CheC-like superfamily Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 451 478 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 Pfam PF00384 Molybdopterin oxidoreductase 2 330 1.6E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 Gene3D G3DSA:2.40.40.20 403 524 1.0E-43 T 14-10-2018 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 SUPERFAMILY SSF53706 1 415 1.05E-155 T 14-10-2018 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 521 3.4E-205 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 Pfam PF01568 Molydopterin dinucleotide binding domain 413 518 4.9E-32 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 276 293 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 SUPERFAMILY SSF50692 368 521 3.73E-45 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 Gene3D G3DSA:3.40.228.10 1 184 3.8E-159 T 14-10-2018 Tph_c18420 a7ad2febdbb23f8275913c5a04206726 528 Gene3D G3DSA:3.40.50.740 185 372 3.8E-159 T 14-10-2018 Tph_c19760 94ac3d9f8330f381dca03a833fde2517 442 SUPERFAMILY SSF103473 44 435 5.49E-51 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c19760 94ac3d9f8330f381dca03a833fde2517 442 Pfam PF05977 Transmembrane secretion effector 38 437 8.3E-70 T 14-10-2018 IPR010290 Transmembrane secretion effector Tph_c19760 94ac3d9f8330f381dca03a833fde2517 442 Gene3D G3DSA:1.20.1250.20 41 432 1.0E-40 T 14-10-2018 Tph_c00330 ef102b73dc45b2eb97f36aa825f4acec 315 Gene3D G3DSA:3.40.50.300 58 315 1.7E-87 T 14-10-2018 Tph_c00330 ef102b73dc45b2eb97f36aa825f4acec 315 Pfam PF13614 AAA domain 64 238 3.7E-66 T 14-10-2018 IPR025669 AAA domain Tph_c00330 ef102b73dc45b2eb97f36aa825f4acec 315 SUPERFAMILY SSF52540 63 314 4.85E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 SUPERFAMILY SSF52402 196 446 1.15E-58 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 SUPERFAMILY SSF54810 405 525 3.53E-52 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 18 525 55.776 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 SUPERFAMILY SSF52317 20 212 3.3E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 PRINTS PR00097 Anthranilate synthase component II signature 65 74 7.2E-6 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 PRINTS PR00097 Anthranilate synthase component II signature 92 103 7.2E-6 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 PRINTS PR00097 Anthranilate synthase component II signature 180 193 7.2E-6 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 Pfam PF00958 GMP synthase C terminal domain 434 524 3.4E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 21 208 1.4E-77 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 216 525 2.8E-151 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 Gene3D G3DSA:3.40.50.620 213 405 6.6E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 Gene3D G3DSA:3.30.300.10 406 525 1.4E-55 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 Pfam PF00117 Glutamine amidotransferase class-I 23 203 2.0E-42 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 180 193 5.6E-8 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 65 74 5.6E-8 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 92 103 5.6E-8 T 14-10-2018 Tph_c08410 ce3b58fb5bfe0abd2390f327ecd7dbcd 525 Gene3D G3DSA:3.40.50.880 18 212 1.8E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c13530 9f61b738d2e247669c5bb08568b9f26a 168 Pfam PF04972 BON domain 6 73 2.3E-16 T 14-10-2018 IPR007055 BON domain Tph_c13530 9f61b738d2e247669c5bb08568b9f26a 168 Pfam PF04972 BON domain 81 144 3.6E-7 T 14-10-2018 IPR007055 BON domain Tph_c13530 9f61b738d2e247669c5bb08568b9f26a 168 SMART SM00749 84 148 8.4 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Tph_c13530 9f61b738d2e247669c5bb08568b9f26a 168 SMART SM00749 11 74 6.1 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 SUPERFAMILY SSF142695 207 379 2.22E-73 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 PIRSF PIRSF001259 5 404 1.1E-191 T 14-10-2018 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 207 402 42.861 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Pfam PF00925 GTP cyclohydrolase II 212 376 8.2E-75 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 5 206 42.08 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Gene3D G3DSA:3.90.870.10 2 208 8.9E-97 T 14-10-2018 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 211 400 6.1E-81 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Gene3D G3DSA:3.40.50.10990 209 379 6.9E-78 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 SUPERFAMILY SSF55821 7 209 2.52E-91 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 11 201 2.4E-93 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 202 1.4E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14030 4b6bddff6f68b9e5b3e0acf99799a00e 404 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 6 398 56.952 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 336 5.2E-87 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 633 1.5E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 Gene3D G3DSA:3.20.20.70 1 383 2.8E-139 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 385 407 1.0E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 504 528 1.0E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 561 577 1.0E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 Gene3D G3DSA:3.40.50.720 385 637 2.3E-73 T 14-10-2018 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 SUPERFAMILY SSF51905 360 643 2.4E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 SUPERFAMILY SSF51395 1 356 3.4E-121 T 14-10-2018 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 603 625 1.7E-17 T 14-10-2018 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 1.7E-17 T 14-10-2018 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 486 1.7E-17 T 14-10-2018 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 508 526 1.7E-17 T 14-10-2018 Tph_c18590 444936fd815ec5aed3ae0ac347df5e4c 644 Gene3D G3DSA:3.50.50.60 480 600 2.3E-73 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 161 404 2.7E-29 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 SUPERFAMILY SSF111369 163 409 1.7E-36 T 14-10-2018 Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 Gene3D G3DSA:1.10.287.470 207 296 9.9E-90 T 14-10-2018 Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 Gene3D G3DSA:2.40.420.20 157 470 9.9E-90 T 14-10-2018 Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 149 484 4.0E-75 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 Gene3D G3DSA:2.40.30.170 162 411 9.9E-90 T 14-10-2018 Tph_c02240 fb36d9b82422a5dbfe19620ea445e8a9 498 Gene3D G3DSA:2.40.50.100 173 331 9.9E-90 T 14-10-2018 Tph_c15370 75fd8b52b7be918b359ed4a662ac8b5d 272 Pfam PF04216 Protein involved in formate dehydrogenase formation 13 265 2.4E-24 T 14-10-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 Tph_c15370 75fd8b52b7be918b359ed4a662ac8b5d 272 SUPERFAMILY SSF144020 8 266 6.67E-53 T 14-10-2018 IPR024064 FdhE-like superfamily Tph_c15370 75fd8b52b7be918b359ed4a662ac8b5d 272 Gene3D G3DSA:3.90.1670.10 4 271 4.6E-45 T 14-10-2018 IPR024064 FdhE-like superfamily Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 Gene3D G3DSA:1.10.220.30 1 84 1.8E-20 T 14-10-2018 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 SUPERFAMILY SSF48029 6 100 6.15E-21 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 Gene3D G3DSA:1.10.220.30 102 193 1.0E-36 T 14-10-2018 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 Pfam PF14841 FliG middle domain 114 188 6.6E-34 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 SUPERFAMILY SSF48029 113 324 7.72E-71 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PIRSF PIRSF003161 1 333 5.6E-121 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 333 4.8E-139 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 113 136 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 8.0E-78 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 Pfam PF14842 FliG N-terminal domain 3 106 1.2E-36 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 Pfam PF01706 FliG C-terminal domain 216 323 9.2E-42 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Tph_c10830 cf2fb562ab0afe9ea80f2ca59cbca8d2 333 Gene3D G3DSA:1.10.220.30 194 333 1.4E-49 T 14-10-2018 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 PRINTS PR00662 Glucose-6-phosphate isomerase signature 378 396 2.8E-16 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 PRINTS PR00662 Glucose-6-phosphate isomerase signature 396 410 2.8E-16 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 PRINTS PR00662 Glucose-6-phosphate isomerase signature 410 423 2.8E-16 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 PRINTS PR00662 Glucose-6-phosphate isomerase signature 192 210 2.8E-16 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 PRINTS PR00662 Glucose-6-phosphate isomerase signature 79 98 2.8E-16 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 PRINTS PR00662 Glucose-6-phosphate isomerase signature 267 288 2.8E-16 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 Gene3D G3DSA:3.40.50.10490 59 216 1.0E-115 T 14-10-2018 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 437 21.662 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 Gene3D G3DSA:3.40.50.10490 53 439 1.0E-115 T 14-10-2018 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 SUPERFAMILY SSF53697 60 445 2.6E-96 T 14-10-2018 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 410 427 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06670 bbb906b8842edc4766b17ff11cc74700 464 Pfam PF00342 Phosphoglucose isomerase 75 435 3.4E-30 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c15400 8d66c93766a7af01297469caefacf166 792 Gene3D G3DSA:3.40.50.740 298 471 2.5E-67 T 14-10-2018 Tph_c15400 8d66c93766a7af01297469caefacf166 792 SUPERFAMILY SSF53706 1 626 1.7E-217 T 14-10-2018 Tph_c15400 8d66c93766a7af01297469caefacf166 792 Gene3D G3DSA:2.40.40.20 617 790 1.2E-71 T 14-10-2018 Tph_c15400 8d66c93766a7af01297469caefacf166 792 SUPERFAMILY SSF50692 614 789 1.56E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c15400 8d66c93766a7af01297469caefacf166 792 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 789 5.5E-304 T 14-10-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 Tph_c15400 8d66c93766a7af01297469caefacf166 792 Pfam PF01568 Molydopterin dinucleotide binding domain 667 783 3.7E-17 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c15400 8d66c93766a7af01297469caefacf166 792 Gene3D G3DSA:3.40.228.10 535 616 5.6E-25 T 14-10-2018 Tph_c15400 8d66c93766a7af01297469caefacf166 792 Pfam PF00384 Molybdopterin oxidoreductase 2 445 4.7E-36 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c15400 8d66c93766a7af01297469caefacf166 792 Gene3D G3DSA:3.40.228.10 1 273 1.8E-79 T 14-10-2018 Tph_c05470 68aafe7755333a5d45a3b6b9467da05b 343 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 35 81 2.7E-12 T 14-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal Tph_c15190 3f20d8bfc200f150fc57f5b7f979333e 261 SUPERFAMILY SSF52540 2 222 1.69E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15190 3f20d8bfc200f150fc57f5b7f979333e 261 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 225 8.2E-18 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c15190 3f20d8bfc200f150fc57f5b7f979333e 261 Gene3D G3DSA:3.40.50.300 1 246 4.1E-59 T 14-10-2018 Tph_c15190 3f20d8bfc200f150fc57f5b7f979333e 261 PIRSF PIRSF005647 1 251 3.2E-71 T 14-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Tph_c06120 e4a948810e13cda96848eea3d9c1ba63 245 Pfam PF04016 Putative heavy-metal chelation 101 234 4.5E-41 T 14-10-2018 IPR007161 Putative heavy-metal chelation domain Tph_c06120 e4a948810e13cda96848eea3d9c1ba63 245 Gene3D G3DSA:3.30.390.100 4 216 4.3E-47 T 14-10-2018 Tph_c06120 e4a948810e13cda96848eea3d9c1ba63 245 SUPERFAMILY SSF159713 2 234 7.32E-66 T 14-10-2018 Tph_c06120 e4a948810e13cda96848eea3d9c1ba63 245 Gene3D G3DSA:3.40.50.11590 99 210 4.3E-47 T 14-10-2018 Tph_c06120 e4a948810e13cda96848eea3d9c1ba63 245 Pfam PF13938 Putative heavy-metal chelation 4 88 1.7E-19 T 14-10-2018 IPR025251 Domain of unknown function DUF4213 Tph_c24960 bd4923315693bc67f08e626465cc4589 205 SMART SM00903 13 151 5.4E-15 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c24960 bd4923315693bc67f08e626465cc4589 205 Pfam PF01613 Flavin reductase like domain 13 147 7.3E-19 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c24960 bd4923315693bc67f08e626465cc4589 205 Gene3D G3DSA:2.30.110.10 8 183 2.1E-45 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tph_c24960 bd4923315693bc67f08e626465cc4589 205 SUPERFAMILY SSF50475 10 166 2.66E-38 T 14-10-2018 Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 Gene3D G3DSA:1.10.3210.10 1 326 2.4E-114 T 14-10-2018 Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 15 325 31.897 T 14-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 38 165 1.0E-48 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 Pfam PF01966 HD domain 75 184 5.3E-21 T 14-10-2018 IPR006674 HD domain Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 SUPERFAMILY SSF109604 26 330 1.78E-87 T 14-10-2018 Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 Pfam PF13286 Phosphohydrolase-associated domain 236 323 1.5E-24 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain Tph_c05830 8b3cd15ec817df9070bc8ebee8ba4508 332 SMART SM00471 71 194 8.2E-13 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c21700 faa2dbd8049a5542e4a4e3a742e47654 145 Pfam PF07883 Cupin domain 49 108 2.1E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Tph_c21700 faa2dbd8049a5542e4a4e3a742e47654 145 Gene3D G3DSA:2.60.120.10 5 140 3.1E-52 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tph_c21700 faa2dbd8049a5542e4a4e3a742e47654 145 SUPERFAMILY SSF51182 13 136 1.81E-30 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 SUPERFAMILY SSF52540 104 316 4.12E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Gene3D G3DSA:3.30.300.180 6 88 4.5E-18 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Gene3D G3DSA:1.10.1750.10 340 441 3.2E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 SUPERFAMILY SSF48295 336 440 5.75E-38 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 14 439 1.3E-175 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 SMART SM00382 137 265 5.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Gene3D G3DSA:3.40.50.300 96 269 2.1E-56 T 14-10-2018 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 352 418 2.4E-33 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 399 418 2.3E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 236 263 2.3E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 138 158 2.3E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 170 184 2.3E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 202 216 2.3E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Gene3D G3DSA:1.10.8.60 271 339 8.7E-29 T 14-10-2018 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Pfam PF00308 Bacterial dnaA protein 105 322 2.4E-102 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 11 440 34.065 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 Pfam PF11638 DnaA N-terminal domain 12 73 6.8E-13 T 14-10-2018 IPR024633 DnaA N-terminal domain Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 SMART SM00760 349 418 2.4E-43 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Tph_c00010 b7c4b1f9eefc0ed879bfa259328cb988 443 ProSitePatterns PS01008 DnaA protein signature. 399 418 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 Gene3D G3DSA:3.10.580.10 250 369 2.5E-11 T 14-10-2018 Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 Pfam PF00005 ABC transporter 20 165 7.0E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 Gene3D G3DSA:3.40.50.300 1 238 2.9E-74 T 14-10-2018 Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 18 361 1.9E-103 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 SUPERFAMILY SSF52540 1 241 7.83E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 SMART SM00382 28 215 2.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 Pfam PF00571 CBS domain 331 365 0.0038 T 14-10-2018 IPR000644 CBS domain Tph_c20400 c589c19e4edb5bbdec6f7db1ca98e0ae 373 SUPERFAMILY SSF54631 261 366 1.02E-11 T 14-10-2018 Tph_c10070 2260d1d5fb0e5acefe60267876884f44 406 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 18 350 4.5E-92 T 14-10-2018 IPR014226 Sporulation integral membrane protein YlbJ Tph_c10070 2260d1d5fb0e5acefe60267876884f44 406 Pfam PF07670 Nucleoside recognition 225 289 7.1E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c20880 13c02af386f52377fec4918d4344c04d 382 SMART SM00897 36 228 2.3E-40 T 14-10-2018 IPR013702 FIST domain, N-terminal Tph_c20880 13c02af386f52377fec4918d4344c04d 382 Pfam PF08495 FIST N domain 39 226 4.2E-34 T 14-10-2018 IPR013702 FIST domain, N-terminal Tph_c20880 13c02af386f52377fec4918d4344c04d 382 SMART SM01204 229 365 1.1E-29 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Tph_c20880 13c02af386f52377fec4918d4344c04d 382 Pfam PF10442 FIST C domain 229 363 6.1E-24 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 Tph_c03490 fdb299186fc467ea4ba6f528d115327e 279 Pfam PF00005 ABC transporter 18 160 8.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c03490 fdb299186fc467ea4ba6f528d115327e 279 SMART SM00382 26 209 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03490 fdb299186fc467ea4ba6f528d115327e 279 Gene3D G3DSA:3.40.50.300 1 233 1.4E-70 T 14-10-2018 Tph_c03490 fdb299186fc467ea4ba6f528d115327e 279 SUPERFAMILY SSF52540 2 226 3.09E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03490 fdb299186fc467ea4ba6f528d115327e 279 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c11860 bd4977be49d743582bee682a1cc4b127 433 SUPERFAMILY SSF53098 278 382 7.59E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c16590 c44573101932deb3b255f36e4c759e2c 167 PIRSF PIRSF004525 1 72 1.4E-8 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted Tph_c16590 c44573101932deb3b255f36e4c759e2c 167 PIRSF PIRSF004525 67 167 14.0 T 14-10-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted Tph_c16590 c44573101932deb3b255f36e4c759e2c 167 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 22 7.9E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c16590 c44573101932deb3b255f36e4c759e2c 167 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c10300 1f307fdb083a7db9c5e8e19c27c1c159 210 SUPERFAMILY SSF53098 8 201 4.7E-63 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c10300 1f307fdb083a7db9c5e8e19c27c1c159 210 Pfam PF01351 Ribonuclease HII 20 195 1.6E-34 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain Tph_c10300 1f307fdb083a7db9c5e8e19c27c1c159 210 Hamap MF_00052_B Ribonuclease HII [rnhB]. 18 198 33.897 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 Tph_c10300 1f307fdb083a7db9c5e8e19c27c1c159 210 Gene3D G3DSA:3.30.420.10 2 208 1.3E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c08230 586bf995f1fd4aceaa18af41886238d8 95 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 2 95 1.5E-18 T 14-10-2018 IPR010038 MoaD, archaeal-type Tph_c08230 586bf995f1fd4aceaa18af41886238d8 95 Pfam PF02597 ThiS family 3 95 1.2E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tph_c08230 586bf995f1fd4aceaa18af41886238d8 95 Gene3D G3DSA:3.10.20.30 1 95 2.7E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c08230 586bf995f1fd4aceaa18af41886238d8 95 SUPERFAMILY SSF54285 2 95 3.92E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tph_c04190 586bf995f1fd4aceaa18af41886238d8 95 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 2 95 1.5E-18 T 14-10-2018 IPR010038 MoaD, archaeal-type Tph_c04190 586bf995f1fd4aceaa18af41886238d8 95 Pfam PF02597 ThiS family 3 95 1.2E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tph_c04190 586bf995f1fd4aceaa18af41886238d8 95 Gene3D G3DSA:3.10.20.30 1 95 2.7E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c04190 586bf995f1fd4aceaa18af41886238d8 95 SUPERFAMILY SSF54285 2 95 3.92E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tph_c25030 a7cd73fe8690e863480934dee6d1cc8d 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 324 4.4E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c25030 a7cd73fe8690e863480934dee6d1cc8d 330 SUPERFAMILY SSF161098 99 309 2.75E-21 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c25030 a7cd73fe8690e863480934dee6d1cc8d 330 Gene3D G3DSA:1.10.3720.10 93 319 1.0E-24 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c11300 724c0ec552524b688dbddfbc0cf95173 105 Gene3D G3DSA:3.30.1330.30 2 95 3.0E-20 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c11300 724c0ec552524b688dbddfbc0cf95173 105 SUPERFAMILY SSF55315 3 102 6.28E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c11300 724c0ec552524b688dbddfbc0cf95173 105 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 3 75 1.3E-7 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Tph_c20680 06e06db84281dff720f85948d42e8ff6 115 Pfam PF14285 Domain of unknown function (DUF4367) 1 111 1.3E-9 T 14-10-2018 IPR025377 Domain of unknown function DUF4367 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 44.104 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.1E-40 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 Pfam PF00318 Ribosomal protein S2 9 224 4.1E-101 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 SUPERFAMILY SSF52313 6 230 3.4E-99 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 7.6E-113 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 Gene3D G3DSA:1.10.287.610 97 152 1.8E-94 T 14-10-2018 Tph_c11140 3b1cd743abb600a40700edd8d07fd312 249 Gene3D G3DSA:3.40.50.10490 10 215 1.8E-94 T 14-10-2018 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 Gene3D G3DSA:1.20.58.1830 3 499 2.9E-125 T 14-10-2018 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 Gene3D G3DSA:2.30.220.10 189 291 2.9E-125 T 14-10-2018 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 5.0E-44 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 Pfam PF00700 Bacterial flagellin C-terminal helical region 414 499 6.4E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 Gene3D G3DSA:2.170.280.10 175 407 2.9E-125 T 14-10-2018 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 Gene3D G3DSA:1.20.1330.10 43 459 2.9E-125 T 14-10-2018 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 SUPERFAMILY SSF64518 1 499 5.23E-105 T 14-10-2018 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 PRINTS PR00207 Flagellin signature 109 132 3.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 PRINTS PR00207 Flagellin signature 74 93 3.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tph_c03120 c86544b4a6ab0e74cac231fb0c39372a 501 PRINTS PR00207 Flagellin signature 35 52 3.4E-24 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tph_c04540 2b90469bd09ee30242ca5363275d132d 150 SMART SM00899 73 143 9.7E-11 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Tph_c04540 2b90469bd09ee30242ca5363275d132d 150 Gene3D G3DSA:2.30.30.90 73 148 1.7E-11 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain Tph_c04540 2b90469bd09ee30242ca5363275d132d 150 Pfam PF04023 FeoA domain 73 142 1.2E-10 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Tph_c04540 2b90469bd09ee30242ca5363275d132d 150 SUPERFAMILY SSF50037 72 143 7.78E-9 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Tph_c01270 9a42c5c6d496cb981f1164d3a55e66e9 335 SUPERFAMILY SSF54862 125 332 1.41E-15 T 14-10-2018 Tph_c01270 9a42c5c6d496cb981f1164d3a55e66e9 335 Pfam PF02596 Uncharacterised ArCR, COG2043 27 233 6.2E-50 T 14-10-2018 IPR003748 Protein of unknown function DUF169 Tph_c01270 9a42c5c6d496cb981f1164d3a55e66e9 335 Pfam PF13187 4Fe-4S dicluster domain 278 328 1.6E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c01270 9a42c5c6d496cb981f1164d3a55e66e9 335 Gene3D G3DSA:3.30.70.20 240 332 1.1E-13 T 14-10-2018 Tph_c01270 9a42c5c6d496cb981f1164d3a55e66e9 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 279 290 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c01270 9a42c5c6d496cb981f1164d3a55e66e9 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 Pfam PF01312 FlhB HrpN YscU SpaS Family 15 355 2.4E-129 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 Gene3D G3DSA:3.40.1690.10 225 365 4.2E-59 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 SUPERFAMILY SSF160544 252 359 2.35E-43 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 18 40 4.5E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 216 234 4.5E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 236 253 4.5E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 280 295 4.5E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 310 331 4.5E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c11010 e9691ac73a27fb9309ce4e2d76ae5de2 365 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 15 361 1.1E-127 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4 343 2.6E-127 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 SUPERFAMILY SSF56014 261 355 3.92E-11 T 14-10-2018 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 Gene3D G3DSA:3.30.413.10 257 356 1.4E-35 T 14-10-2018 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 2 351 34.795 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 PIRSF PIRSF004640 1 357 1.9E-147 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 Gene3D G3DSA:3.20.20.20 1 255 9.7E-109 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 SUPERFAMILY SSF51717 32 203 4.32E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c11250 08631113017ea1e66a513a9ed92e8474 363 Pfam PF04551 GcpE protein 7 348 1.7E-139 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Tph_c26030 dad50f601cea68e4393d4bfbb4d76756 166 SUPERFAMILY SSF88723 11 163 8.59E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c26030 dad50f601cea68e4393d4bfbb4d76756 166 SMART SM00670 10 153 5.8E-4 T 14-10-2018 IPR002716 PIN domain Tph_c26030 dad50f601cea68e4393d4bfbb4d76756 166 Pfam PF01850 PIN domain 12 156 3.0E-14 T 14-10-2018 IPR002716 PIN domain Tph_c26030 dad50f601cea68e4393d4bfbb4d76756 166 Gene3D G3DSA:3.40.50.1010 11 162 2.9E-10 T 14-10-2018 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 324 3.2E-171 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 SUPERFAMILY SSF54752 268 325 9.42E-22 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 ProSitePatterns PS00321 recA signature. 213 221 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 Gene3D G3DSA:3.30.250.10 268 326 3.9E-27 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 Gene3D G3DSA:3.40.50.300 29 267 6.6E-81 T 14-10-2018 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 Pfam PF00154 recA bacterial DNA recombination protein 6 268 2.3E-142 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 PRINTS PR00142 RecA protein signature 165 194 9.3E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 PRINTS PR00142 RecA protein signature 127 156 9.3E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 PRINTS PR00142 RecA protein signature 210 238 9.3E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 PRINTS PR00142 RecA protein signature 297 314 9.3E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 PRINTS PR00142 RecA protein signature 93 122 9.3E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 PRINTS PR00142 RecA protein signature 243 272 9.3E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 Hamap MF_00268 Protein RecA [recA]. 4 329 52.909 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 SUPERFAMILY SSF52540 3 267 1.68E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11580 e9b53f961a9f8718c4028ef9d7515c3a 348 SMART SM00382 57 228 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03760 2a3b3b4e5b95b39c63b75114ecb95c37 185 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 17 177 1.8E-50 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Tph_c03760 2a3b3b4e5b95b39c63b75114ecb95c37 185 Pfam PF05683 Fumarase C-terminus 12 177 7.0E-55 T 14-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 Tph_c03760 2a3b3b4e5b95b39c63b75114ecb95c37 185 Gene3D G3DSA:3.20.130.10 1 177 8.9E-64 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Tph_c03760 2a3b3b4e5b95b39c63b75114ecb95c37 185 SUPERFAMILY SSF117457 6 176 9.29E-59 T 14-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 Tph_c02970 ee3ce8bf293ca2a225c18ad3e24be58f 92 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 44 2.3E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c02970 ee3ce8bf293ca2a225c18ad3e24be58f 92 SMART SM00966 5 50 8.8E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c02970 ee3ce8bf293ca2a225c18ad3e24be58f 92 Gene3D G3DSA:2.10.260.10 2 43 3.2E-10 T 14-10-2018 Tph_c02970 ee3ce8bf293ca2a225c18ad3e24be58f 92 SUPERFAMILY SSF89447 4 61 5.76E-12 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c02970 ee3ce8bf293ca2a225c18ad3e24be58f 92 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 47 3.4E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c14970 bbcc8db0e5d0d9dec1cd989820c9ce22 126 Pfam PF12670 Protein of unknown function (DUF3792) 12 122 2.8E-16 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane Tph_c14970 bbcc8db0e5d0d9dec1cd989820c9ce22 126 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 12 124 9.6E-17 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 Gene3D G3DSA:1.50.10.20 461 564 5.9E-12 T 14-10-2018 Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 SUPERFAMILY SSF48239 481 639 3.73E-14 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 588 638 0.2 T 14-10-2018 IPR001330 PFTB repeat GO:0003824 Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 Pfam PF00432 Prenyltransferase and squalene oxidase repeat 508 531 0.15 T 14-10-2018 IPR001330 PFTB repeat GO:0003824 Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 Gene3D G3DSA:1.50.10.20 565 642 8.9E-10 T 14-10-2018 Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 SUPERFAMILY SSF48239 325 562 3.71E-13 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Tph_c22060 d319bc53f28e115b554bda08bc7c229f 642 SUPERFAMILY SSF48239 77 239 1.86E-7 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 247 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 247 263 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 263 275 1.1E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 Pfam PF00196 Bacterial regulatory proteins, luxR family 232 285 8.6E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 Gene3D G3DSA:3.30.450.40 23 202 8.3E-32 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 Gene3D G3DSA:1.10.10.10 228 289 1.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 ProSitePatterns PS00622 LuxR-type HTH domain signature. 247 274 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 SMART SM00421 230 287 2.6E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c14080 8e11bba88655ce5c37f4ec3fcbd04d68 289 SUPERFAMILY SSF46894 226 288 8.84E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 Gene3D G3DSA:3.30.1330.30 1 79 7.1E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 SUPERFAMILY SSF55315 5 78 1.16E-21 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 79 2.0E-16 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 PRINTS PR00884 Ribosomal protein HS6 signature 28 39 3.6E-13 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 PRINTS PR00884 Ribosomal protein HS6 signature 18 28 3.6E-13 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 PRINTS PR00884 Ribosomal protein HS6 signature 54 64 3.6E-13 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25910 89a3943c253b61e9a91f02e23507e4d8 80 PRINTS PR00884 Ribosomal protein HS6 signature 68 80 3.6E-13 T 14-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c09610 0071faa6191852d906d8987257b43b13 241 Pfam PF04055 Radical SAM superfamily 24 176 1.4E-26 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c09610 0071faa6191852d906d8987257b43b13 241 SUPERFAMILY SSF102114 24 212 1.83E-25 T 14-10-2018 Tph_c09610 0071faa6191852d906d8987257b43b13 241 Gene3D G3DSA:3.20.20.70 1 241 5.0E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c09610 0071faa6191852d906d8987257b43b13 241 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 5 235 1.4E-73 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 Tph_c09610 0071faa6191852d906d8987257b43b13 241 Pfam PF13353 4Fe-4S single cluster domain 17 97 8.3E-14 T 14-10-2018 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SMART SM00382 483 619 1.4E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SMART SM00382 209 345 3.0E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 487 616 1.7E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 213 342 3.7E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 6 88 4.2E-22 T 14-10-2018 IPR003338 CDC48, N-terminal subdomain Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SMART SM01072 105 167 7.4E-4 T 14-10-2018 IPR004201 CDC48, domain 2 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Gene3D G3DSA:3.40.50.300 169 343 5.3E-68 T 14-10-2018 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SUPERFAMILY SSF52540 440 699 8.84E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SUPERFAMILY SSF54585 86 178 2.35E-9 T 14-10-2018 IPR029067 CDC48 domain 2-like superfamily Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 ProSitePatterns PS00674 AAA-protein family signature. 587 605 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SUPERFAMILY SSF50692 3 87 4.4E-21 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 TIGRFAM TIGR01243 CDC48: AAA family ATPase, CDC48 subfamily 6 701 7.5E-280 T 14-10-2018 IPR005938 AAA ATPase, CDC48 family GO:0016787 Reactome: R-HSA-110320|Reactome: R-HSA-3371511|Reactome: R-HSA-382556|Reactome: R-HSA-532668|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5678895|Reactome: R-HSA-5689877|Reactome: R-HSA-5689896|Reactome: R-HSA-6798695|Reactome: R-HSA-8866654|Reactome: R-HSA-8876725 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SUPERFAMILY SSF52540 173 400 3.39E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Gene3D G3DSA:3.40.50.300 445 617 1.4E-90 T 14-10-2018 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Gene3D G3DSA:2.40.40.20 2 89 3.2E-26 T 14-10-2018 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 ProSitePatterns PS00674 AAA-protein family signature. 313 331 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Gene3D G3DSA:1.10.8.60 618 700 1.4E-90 T 14-10-2018 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Gene3D G3DSA:1.10.8.60 344 441 2.5E-26 T 14-10-2018 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 Pfam PF02933 Cell division protein 48 (CDC48), domain 2 112 161 4.9E-10 T 14-10-2018 IPR004201 CDC48, domain 2 Tph_c10590 d07f3f5b52fbdb657f379536da20fb9b 707 SMART SM01073 5 89 1.8E-27 T 14-10-2018 IPR003338 CDC48, N-terminal subdomain Tph_c24420 ac1148768394966853b4b191d7ee5ce8 240 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 2 139 2.8E-11 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Tph_c24420 ac1148768394966853b4b191d7ee5ce8 240 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 2 43 3.9E-13 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Tph_c24420 ac1148768394966853b4b191d7ee5ce8 240 Gene3D G3DSA:3.30.70.2660 1 170 3.0E-7 T 14-10-2018 Tph_c24420 ac1148768394966853b4b191d7ee5ce8 240 TIGRFAM TIGR02592 cas_Cas5h: CRISPR-associated protein Cas5, subtype I-B/HMARI 3 237 1.7E-40 T 14-10-2018 IPR013421 CRISPR-associated protein Cas5, HALMA Tph_c25180 2d52fa91a748e1b1a249f10bce3efc50 312 Gene3D G3DSA:3.40.50.150 45 202 2.8E-19 T 14-10-2018 Tph_c25180 2d52fa91a748e1b1a249f10bce3efc50 312 SUPERFAMILY SSF53335 49 245 2.64E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c25180 2d52fa91a748e1b1a249f10bce3efc50 312 Pfam PF13649 Methyltransferase domain 91 180 2.2E-10 T 14-10-2018 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Gene3D G3DSA:3.40.50.800 538 643 9.0E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Gene3D G3DSA:3.30.930.10 230 537 4.1E-128 T 14-10-2018 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Pfam PF03129 Anticodon binding domain 547 636 7.3E-21 T 14-10-2018 IPR004154 Anticodon-binding Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 74 640 35.153 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Gene3D G3DSA:3.10.20.30 9 71 1.9E-15 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 330 535 1.3E-38 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 80 637 2.2E-224 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Gene3D G3DSA:3.30.980.10 77 228 4.2E-66 T 14-10-2018 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Gene3D G3DSA:3.30.54.20 138 194 4.2E-66 T 14-10-2018 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 SMART SM00863 177 226 2.1E-24 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 336 364 3.4E-51 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 3.4E-51 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 369 392 3.4E-51 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 3.4E-51 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 3.4E-51 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 SUPERFAMILY SSF81271 10 70 8.28E-12 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Pfam PF02824 TGS domain 10 68 1.7E-6 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 SUPERFAMILY SSF52954 535 638 3.93E-30 T 14-10-2018 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 SUPERFAMILY SSF55681 250 531 2.68E-94 T 14-10-2018 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 SUPERFAMILY SSF55186 72 248 2.62E-69 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tph_c09950 9f314cad4a781d4badb0a5ccb46e7b45 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 177 226 3.9E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Tph_c09680 7569a56ca468142c3261c9b4472fd2bf 151 SUPERFAMILY SSF55931 6 116 2.16E-20 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tph_c09680 7569a56ca468142c3261c9b4472fd2bf 151 Pfam PF00120 Glutamine synthetase, catalytic domain 5 116 1.2E-16 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c09680 7569a56ca468142c3261c9b4472fd2bf 151 Gene3D G3DSA:3.30.590.10 2 119 6.7E-29 T 14-10-2018 Tph_c09680 7569a56ca468142c3261c9b4472fd2bf 151 SMART SM01230 2 151 4.6E-4 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c19530 f32851eba771471fd14da857b277a7a0 347 SMART SM00729 37 255 1.8E-17 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c19530 f32851eba771471fd14da857b277a7a0 347 SUPERFAMILY SSF102114 37 260 2.75E-24 T 14-10-2018 Tph_c19530 f32851eba771471fd14da857b277a7a0 347 Pfam PF04055 Radical SAM superfamily 43 214 1.4E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c19530 f32851eba771471fd14da857b277a7a0 347 Gene3D G3DSA:3.20.20.70 27 276 6.3E-18 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c06930 5094b89729bb4caf2fff0c8568f7d796 479 PIRSF PIRSF012293 7 479 2.2E-146 T 14-10-2018 IPR009377 Ethanolamine utilisation EutA Tph_c06930 5094b89729bb4caf2fff0c8568f7d796 479 Gene3D G3DSA:3.30.420.40 149 274 2.1E-5 T 14-10-2018 Tph_c06930 5094b89729bb4caf2fff0c8568f7d796 479 SUPERFAMILY SSF53067 12 327 6.48E-11 T 14-10-2018 Tph_c06930 5094b89729bb4caf2fff0c8568f7d796 479 Pfam PF06277 Ethanolamine utilisation protein EutA 10 477 2.8E-153 T 14-10-2018 IPR009377 Ethanolamine utilisation EutA Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PRINTS PR00175 Sodium/alanine symporter signature 303 321 7.2E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PRINTS PR00175 Sodium/alanine symporter signature 93 115 7.2E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PRINTS PR00175 Sodium/alanine symporter signature 349 371 7.2E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PRINTS PR00175 Sodium/alanine symporter signature 212 231 7.2E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PRINTS PR00175 Sodium/alanine symporter signature 408 428 7.2E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PRINTS PR00175 Sodium/alanine symporter signature 184 202 7.2E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 Pfam PF01235 Sodium:alanine symporter family 59 446 8.8E-152 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PIRSF PIRSF006060 48 263 6.7E-9 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 PIRSF PIRSF006060 278 447 1.7 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 439 1.6E-158 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 Tph_c18630 2885dd3123636ad79bbbfd2b9e7b44b7 448 Gene3D G3DSA:1.20.1740.10 60 447 4.4E-10 T 14-10-2018 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Gene3D G3DSA:3.90.740.10 227 417 1.7E-282 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 SUPERFAMILY SSF50677 225 417 8.06E-51 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 SUPERFAMILY SSF52374 3 629 5.2E-159 T 14-10-2018 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 SUPERFAMILY SSF47323 624 826 9.16E-38 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 562 572 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 529 551 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 490 508 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 5.3E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Gene3D G3DSA:1.10.730.10 601 762 3.6E-56 T 14-10-2018 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 404 7.6E-73 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 825 23.876 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Pfam PF08264 Anticodon-binding domain of tRNA 662 783 9.3E-25 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 12 169 4.9E-29 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 419 620 3.0E-24 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Gene3D G3DSA:3.10.20.590 764 826 1.3E-18 T 14-10-2018 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Gene3D G3DSA:3.40.50.620 33 576 1.7E-282 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 Gene3D G3DSA:2.30.210.10 577 590 1.7E-282 T 14-10-2018 Tph_c21390 4aa0fb0a3cdf73103b2b41a55913a010 826 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 576 4.4E-277 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 Pfam PF13187 4Fe-4S dicluster domain 9 55 3.5E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 SUPERFAMILY SSF54862 3 57 4.79E-18 T 14-10-2018 Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 Gene3D G3DSA:3.30.70.20 1 58 2.0E-17 T 14-10-2018 Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 3.6E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 3.6E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tph_c15740 966f8f8b4819e24dd0a04fdc446f7586 58 PRINTS PR00352 3Fe-4S ferredoxin signature 43 55 3.6E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tph_c25670 afa9f44da4cc4ae481a40e8fa7c00f4d 146 SUPERFAMILY SSF52080 4 144 2.09E-48 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Tph_c25670 afa9f44da4cc4ae481a40e8fa7c00f4d 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 1.7E-51 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25670 afa9f44da4cc4ae481a40e8fa7c00f4d 146 Gene3D G3DSA:3.100.10.10 66 146 6.2E-25 T 14-10-2018 Tph_c25670 afa9f44da4cc4ae481a40e8fa7c00f4d 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25670 afa9f44da4cc4ae481a40e8fa7c00f4d 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 6.2E-38 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P Tph_c25670 afa9f44da4cc4ae481a40e8fa7c00f4d 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 21.83 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Tph_c21430 00870c8ae5042501e4e308ebcfc5879b 373 Pfam PF17231 Family of unknown function (DUF5305) 119 334 2.4E-39 T 14-10-2018 IPR035185 Protein of unknown function DUF5305 Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 64 75 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 Pfam PF13183 4Fe-4S dicluster domain 10 78 1.6E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 13 24 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 SUPERFAMILY SSF46548 8 94 8.89E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 Pfam PF02754 Cysteine-rich domain 303 387 6.8E-19 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 Pfam PF02754 Cysteine-rich domain 179 261 1.4E-17 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 Gene3D G3DSA:1.10.1060.10 2 92 1.6E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c10360 4de3069e24027643bf6b8c820fa035ed 414 PIRSF PIRSF000139 1 414 2.0E-102 T 14-10-2018 Tph_c21040 d69a89f43b43b3ec840d6ec8c25f1c17 109 Gene3D G3DSA:3.30.429.10 1 109 1.8E-27 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Tph_c21040 d69a89f43b43b3ec840d6ec8c25f1c17 109 SUPERFAMILY SSF55331 3 108 2.88E-21 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily Tph_c21040 d69a89f43b43b3ec840d6ec8c25f1c17 109 Pfam PF14552 Tautomerase enzyme 50 104 1.8E-16 T 14-10-2018 IPR037479 Tautomerase, MSAD family Tph_c12870 02a789119388b1b169a2ca2f008430a1 101 Gene3D G3DSA:3.30.1200.10 1 98 2.3E-26 T 14-10-2018 IPR036591 YggU-like superfamily Tph_c12870 02a789119388b1b169a2ca2f008430a1 101 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 10 85 7.6E-18 T 14-10-2018 IPR005228 Conserved hypothetical protein CHP00251 Tph_c12870 02a789119388b1b169a2ca2f008430a1 101 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 19.817 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Tph_c12870 02a789119388b1b169a2ca2f008430a1 101 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 1.2E-23 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Tph_c12870 02a789119388b1b169a2ca2f008430a1 101 SUPERFAMILY SSF69786 3 87 1.01E-25 T 14-10-2018 IPR036591 YggU-like superfamily Tph_c12870 02a789119388b1b169a2ca2f008430a1 101 SMART SM01152 8 83 7.5E-28 T 14-10-2018 IPR003746 Protein of unknown function DUF167 Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 Gene3D G3DSA:3.90.1150.10 11 388 6.7E-182 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 SUPERFAMILY SSF53383 5 413 6.93E-176 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 PIRSF PIRSF000412 4 414 8.6E-167 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 Pfam PF00464 Serine hydroxymethyltransferase 11 382 7.9E-171 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 414 51.644 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27490 f4179716987f4161d9edb79d050bd29a 415 Gene3D G3DSA:3.40.640.10 37 286 6.7E-182 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c19470 da3ba18c439988c106d258fa05c2bfb0 95 TIGRFAM TIGR01687 moaD_arch: MoaD family protein 2 95 1.7E-16 T 14-10-2018 IPR010038 MoaD, archaeal-type Tph_c19470 da3ba18c439988c106d258fa05c2bfb0 95 SUPERFAMILY SSF54285 2 95 3.18E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tph_c19470 da3ba18c439988c106d258fa05c2bfb0 95 Gene3D G3DSA:3.10.20.30 1 95 4.7E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c19470 da3ba18c439988c106d258fa05c2bfb0 95 Pfam PF02597 ThiS family 3 95 7.3E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tph_c01060 fbbd431e415de63b3d08e72ec4af98aa 375 SUPERFAMILY SSF53807 45 361 5.61E-54 T 14-10-2018 Tph_c01060 fbbd431e415de63b3d08e72ec4af98aa 375 Gene3D G3DSA:3.40.50.1980 34 181 1.6E-50 T 14-10-2018 Tph_c01060 fbbd431e415de63b3d08e72ec4af98aa 375 Pfam PF01497 Periplasmic binding protein 61 305 1.0E-22 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tph_c01060 fbbd431e415de63b3d08e72ec4af98aa 375 Gene3D G3DSA:3.40.50.1980 182 375 2.7E-76 T 14-10-2018 Tph_c17650 b50b05db1491e55261821706d002cac9 499 SUPERFAMILY SSF52374 5 312 4.83E-117 T 14-10-2018 Tph_c17650 b50b05db1491e55261821706d002cac9 499 Gene3D G3DSA:3.40.50.620 1 330 5.1E-147 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c17650 b50b05db1491e55261821706d002cac9 499 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c17650 b50b05db1491e55261821706d002cac9 499 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 486 3.1E-171 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tph_c17650 b50b05db1491e55261821706d002cac9 499 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 321 6.6E-108 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Tph_c17650 b50b05db1491e55261821706d002cac9 499 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 3.1E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tph_c17650 b50b05db1491e55261821706d002cac9 499 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 3.1E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tph_c17650 b50b05db1491e55261821706d002cac9 499 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 3.1E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tph_c17650 b50b05db1491e55261821706d002cac9 499 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 3.1E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tph_c17650 b50b05db1491e55261821706d002cac9 499 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 3.1E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Tph_c17650 b50b05db1491e55261821706d002cac9 499 Gene3D G3DSA:1.10.10.350 384 488 5.3E-31 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tph_c17650 b50b05db1491e55261821706d002cac9 499 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 483 35.277 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tph_c17650 b50b05db1491e55261821706d002cac9 499 SUPERFAMILY SSF48163 315 483 9.81E-44 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 PIRSF PIRSF003169 1 379 8.0E-136 T 14-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 Gene3D G3DSA:3.30.565.10 240 380 4.7E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 Pfam PF07730 Histidine kinase 175 241 2.6E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 SUPERFAMILY SSF55874 242 372 1.19E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 SMART SM00387 280 375 6.1E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 372 4.0E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c05410 3a9867a104ee5503f36d9fd7501bdcbb 383 Pfam PF05384 Sensor protein DegS 7 164 6.5E-55 T 14-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 Tph_c07410 b29109bbb272106263dc53e0ebe03eff 349 Gene3D G3DSA:1.10.443.10 125 313 1.2E-42 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tph_c07410 b29109bbb272106263dc53e0ebe03eff 349 SUPERFAMILY SSF56349 8 312 1.41E-41 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tph_c07410 b29109bbb272106263dc53e0ebe03eff 349 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 99 1.1E-9 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tph_c07410 b29109bbb272106263dc53e0ebe03eff 349 Pfam PF00589 Phage integrase family 126 306 4.1E-31 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tph_c07410 b29109bbb272106263dc53e0ebe03eff 349 Gene3D G3DSA:1.10.150.130 10 105 9.6E-16 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tph_c22490 7eb472ef604887dbc30dffbcb47cc169 109 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 96 7.7E-24 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tph_c22490 7eb472ef604887dbc30dffbcb47cc169 109 SUPERFAMILY SSF53146 1 109 1.31E-33 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c22490 7eb472ef604887dbc30dffbcb47cc169 109 Gene3D G3DSA:3.30.420.130 1 103 3.9E-31 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 Gene3D G3DSA:3.20.20.70 2 294 4.8E-155 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 SUPERFAMILY SSF51366 18 267 1.6E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 ProSitePatterns PS01235 PdxS/SNZ family signature. 205 223 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 Pfam PF01680 SOR/SNZ family 7 212 9.4E-113 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 294 2.7E-155 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 PIRSF PIRSF029271 1 294 4.2E-157 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00140 1119c02a5a52b83d6d7696e8b0fb3c87 294 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 4 294 54.394 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Pfam PF00575 S1 RNA binding domain 425 489 1.3E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Pfam PF00575 S1 RNA binding domain 510 580 2.0E-23 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Pfam PF00575 S1 RNA binding domain 336 407 2.4E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Pfam PF00575 S1 RNA binding domain 594 666 8.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 283 32.273 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SUPERFAMILY SSF50249 510 594 2.46E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SMART SM00316 510 580 1.9E-30 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SMART SM00316 595 666 4.4E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SMART SM00316 336 407 1.4E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SMART SM00316 423 491 2.7E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SUPERFAMILY SSF50249 409 495 1.34E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 279 2.0E-82 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Pfam PF02401 LytB protein 6 279 8.6E-89 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:3.40.50.11270 15 97 5.9E-94 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:2.40.50.140 419 498 1.6E-10 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:3.40.1010.20 98 190 5.9E-94 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:2.40.50.140 328 418 5.3E-20 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:3.40.1010.20 6 279 5.9E-94 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SUPERFAMILY SSF50249 585 668 2.01E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:2.40.50.140 507 590 1.2E-29 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 Gene3D G3DSA:2.40.50.140 591 675 6.9E-29 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 SUPERFAMILY SSF50249 331 432 1.79E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 475 495 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 428 444 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 446 463 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 338 356 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 610 629 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 356 370 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 404 423 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 532 553 2.8E-59 T 14-10-2018 Tph_c15690 859e40d9b7c5c66a3015277101a73d07 708 PRINTS PR00681 Ribosomal protein S1 signature 649 667 2.8E-59 T 14-10-2018 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 Gene3D G3DSA:3.40.50.720 5 333 9.9E-130 T 14-10-2018 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 147 163 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 347 4.4E-130 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 SUPERFAMILY SSF51735 3 180 2.25E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 SMART SM00859 4 144 8.3E-48 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 Gene3D G3DSA:3.30.360.10 150 315 9.9E-130 T 14-10-2018 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 SUPERFAMILY SSF55347 152 315 9.81E-55 T 14-10-2018 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 143 3.0E-29 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 161 318 2.6E-24 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c25480 fa28e139cd08e2fbef3a01226108fb53 347 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 3 341 43.353 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c17940 3f9ea03cbe8d6828b79039cb8c0a23ae 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 277 6.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c17940 3f9ea03cbe8d6828b79039cb8c0a23ae 284 Gene3D G3DSA:1.10.3720.10 61 279 4.5E-15 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17940 3f9ea03cbe8d6828b79039cb8c0a23ae 284 SUPERFAMILY SSF161098 67 246 6.02E-19 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 SMART SM00345 15 74 5.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 Gene3D G3DSA:1.10.10.10 9 132 8.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 6.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 Gene3D G3DSA:3.30.70.1450 133 206 2.5E-22 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 SUPERFAMILY SSF116726 134 203 9.55E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 Pfam PF02080 TrkA-C domain 136 201 8.2E-20 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tph_c11810 e7b51eabb2329db2647fdb6fb145c470 223 SUPERFAMILY SSF46785 5 77 1.64E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c05370 32b2eea62fda430990a154b929bd88ca 91 Pfam PF09723 Zinc ribbon domain 1 39 4.9E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c05370 32b2eea62fda430990a154b929bd88ca 91 SMART SM00834 1 40 6.8E-17 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c05370 32b2eea62fda430990a154b929bd88ca 91 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 6.0E-19 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c02820 ffb5af1e3913035fb0e7f007f1ba1e75 436 Gene3D G3DSA:1.10.3210.10 3 335 3.2E-82 T 14-10-2018 Tph_c02820 ffb5af1e3913035fb0e7f007f1ba1e75 436 Pfam PF01966 HD domain 52 196 2.0E-15 T 14-10-2018 IPR006674 HD domain Tph_c02820 ffb5af1e3913035fb0e7f007f1ba1e75 436 SMART SM00471 48 203 2.6E-12 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c02820 ffb5af1e3913035fb0e7f007f1ba1e75 436 SUPERFAMILY SSF109604 2 430 1.07E-83 T 14-10-2018 Tph_c17810 7ee4e6e8eef4a5ff3e5b7c74bec94891 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 259 1.9E-106 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17810 7ee4e6e8eef4a5ff3e5b7c74bec94891 270 Gene3D G3DSA:3.40.1190.20 1 267 2.7E-108 T 14-10-2018 IPR029056 Ribokinase-like Tph_c17810 7ee4e6e8eef4a5ff3e5b7c74bec94891 270 Pfam PF08543 Phosphomethylpyrimidine kinase 14 257 1.2E-100 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Tph_c17810 7ee4e6e8eef4a5ff3e5b7c74bec94891 270 SUPERFAMILY SSF53613 4 263 4.68E-87 T 14-10-2018 IPR029056 Ribokinase-like Tph_c10650 ea67e7989af2e8b37f71579cefccba6f 74 Gene3D G3DSA:2.40.30.170 1 61 6.1E-11 T 14-10-2018 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.4E-59 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 Pfam PF00411 Ribosomal protein S11 19 128 1.7E-50 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.397 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 PIRSF PIRSF002131 1 129 6.9E-55 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 Gene3D G3DSA:3.30.420.80 1 129 1.2E-55 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 SUPERFAMILY SSF53137 14 129 8.07E-51 T 14-10-2018 Tph_c25590 8e4b7b398120feee76674a3165f92d79 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 SUPERFAMILY SSF46785 442 511 7.89E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Gene3D G3DSA:3.40.50.300 4 170 1.2E-50 T 14-10-2018 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Pfam PF09107 Elongation factor SelB, winged helix 585 630 1.1E-19 T 14-10-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 5 371 1.8E-101 T 14-10-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Gene3D G3DSA:2.40.30.10 179 267 3.8E-29 T 14-10-2018 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 SUPERFAMILY SSF46785 581 630 3.69E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Pfam PF03144 Elongation factor Tu domain 2 195 261 1.3E-12 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Gene3D G3DSA:1.10.10.10 572 631 2.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Pfam PF00009 Elongation factor Tu GTP binding domain 5 166 6.5E-33 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 SUPERFAMILY SSF50447 178 268 2.79E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Gene3D G3DSA:1.10.10.2770 443 570 3.7E-34 T 14-10-2018 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Pfam PF09106 Elongation factor SelB, winged helix 451 502 1.6E-15 T 14-10-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 SUPERFAMILY SSF50465 269 365 8.63E-25 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 Gene3D G3DSA:2.40.30.10 280 364 1.3E-6 T 14-10-2018 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 PRINTS PR00315 GTP-binding elongation factor signature 111 120 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 PRINTS PR00315 GTP-binding elongation factor signature 74 85 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 PRINTS PR00315 GTP-binding elongation factor signature 58 68 2.6E-5 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c00440 17545606bb6f2e0c7bc3fc89b025c84c 635 SUPERFAMILY SSF52540 4 196 4.6E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17920 73d3cd524a86a2f6d7ede0594be510a9 540 PIRSF PIRSF002741 15 529 2.0E-88 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c17920 73d3cd524a86a2f6d7ede0594be510a9 540 Gene3D G3DSA:3.10.105.10 287 504 2.8E-113 T 14-10-2018 Tph_c17920 73d3cd524a86a2f6d7ede0594be510a9 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 448 7.8E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c17920 73d3cd524a86a2f6d7ede0594be510a9 540 Gene3D G3DSA:3.40.190.10 79 515 2.8E-113 T 14-10-2018 Tph_c17920 73d3cd524a86a2f6d7ede0594be510a9 540 Gene3D G3DSA:3.90.76.10 83 196 2.8E-113 T 14-10-2018 Tph_c17920 73d3cd524a86a2f6d7ede0594be510a9 540 SUPERFAMILY SSF53850 59 523 2.9E-112 T 14-10-2018 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 SUPERFAMILY SSF52283 5 137 1.13E-35 T 14-10-2018 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 316 6.5E-31 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Pfam PF01842 ACT domain 458 521 8.4E-10 T 14-10-2018 IPR002912 ACT domain Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 SUPERFAMILY SSF143548 323 453 3.92E-33 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Gene3D G3DSA:3.40.50.720 9 308 5.8E-114 T 14-10-2018 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Gene3D G3DSA:3.40.50.720 100 282 5.8E-114 T 14-10-2018 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 284 1.5E-60 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 SUPERFAMILY SSF51735 104 285 3.73E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Gene3D G3DSA:3.30.70.260 458 531 4.4E-20 T 14-10-2018 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 7 529 1.6E-195 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 Gene3D G3DSA:3.30.1330.90 322 456 4.4E-36 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tph_c00170 f49d7770f23f9303f9736bcec05b1583 531 SUPERFAMILY SSF55021 447 529 2.75E-17 T 14-10-2018 Tph_c03750 0ee11b8390d6d9c708196127c979fbd6 286 Pfam PF05681 Fumarate hydratase (Fumerase) 12 277 4.4E-111 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Tph_c03750 0ee11b8390d6d9c708196127c979fbd6 286 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 276 1.5E-101 T 14-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 35.541 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 57 2.5E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 Gene3D G3DSA:3.40.50.620 1 162 2.4E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 Pfam PF01467 Cytidylyltransferase-like 5 133 6.3E-22 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 157 9.0E-60 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.9E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.9E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 1.9E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.9E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.9E-50 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Tph_c10050 c3b3c31d997263a24756c1456f6df860 164 SUPERFAMILY SSF52374 1 156 5.09E-45 T 14-10-2018 Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 297 458 1.0E-38 T 14-10-2018 IPR027623 AmmeMemoRadiSam system protein A Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 265 3.9E-40 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 Gene3D G3DSA:3.40.830.10 1 270 5.0E-75 T 14-10-2018 Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 Pfam PF01871 AMMECR1 297 458 7.9E-41 T 14-10-2018 IPR002733 AMMECR1 domain Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 SUPERFAMILY SSF53213 3 272 1.57E-46 T 14-10-2018 Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 296 459 2.1E-30 T 14-10-2018 IPR023473 AMMECR1 Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 Gene3D G3DSA:3.30.1490.150 393 455 5.9E-38 T 14-10-2018 Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 SUPERFAMILY SSF143447 292 460 5.36E-50 T 14-10-2018 IPR036071 AMMECR1 domain superfamily Tph_c25500 317a39d50340b25c910ccc4fdf8182e9 460 Gene3D G3DSA:3.30.700.20 295 456 5.9E-38 T 14-10-2018 IPR027485 AMMECR1, N-terminal Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 SUPERFAMILY SSF53067 5 141 1.73E-40 T 14-10-2018 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 331 1.8E-146 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 Gene3D G3DSA:3.30.420.40 7 322 1.1E-131 T 14-10-2018 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 SUPERFAMILY SSF53067 143 328 1.98E-49 T 14-10-2018 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 125 144 1.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 180 200 1.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.3E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 Gene3D G3DSA:3.30.420.40 147 312 1.1E-131 T 14-10-2018 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 Gene3D G3DSA:3.90.640.10 179 254 1.1E-131 T 14-10-2018 Tph_c27130 bcfcbc8b8d73ecfcae54f7cbe282098b 341 Pfam PF06723 MreB/Mbl protein 5 330 1.5E-145 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c10970 a314bfb946ce304e2c50d7dd0a15a543 168 Pfam PF04347 Flagellar biosynthesis protein, FliO 63 124 3.9E-12 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Tph_c10970 a314bfb946ce304e2c50d7dd0a15a543 168 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 42 112 5.4E-17 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 Gene3D G3DSA:3.90.190.20 321 455 3.2E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 Pfam PF08245 Mur ligase middle domain 114 296 3.5E-36 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 Gene3D G3DSA:3.40.1190.10 98 315 4.5E-62 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 SUPERFAMILY SSF53244 315 455 2.04E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 SUPERFAMILY SSF53623 101 313 4.71E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 455 35.579 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 SUPERFAMILY SSF51984 3 98 1.96E-15 T 14-10-2018 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 316 384 1.8E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 453 4.0E-132 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c12620 ae54dc9325ee63e51f0847442266c3bd 455 Gene3D G3DSA:3.40.50.720 7 91 1.7E-22 T 14-10-2018 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 PRINTS PR00046 Major sigma-70 factor signature 300 312 8.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 PRINTS PR00046 Major sigma-70 factor signature 321 336 8.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 PRINTS PR00046 Major sigma-70 factor signature 176 184 8.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 PRINTS PR00046 Major sigma-70 factor signature 152 165 8.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 PRINTS PR00046 Major sigma-70 factor signature 336 347 8.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 321 347 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Gene3D G3DSA:1.10.601.10 88 122 2.4E-13 T 14-10-2018 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Gene3D G3DSA:1.10.601.10 123 200 4.3E-51 T 14-10-2018 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Pfam PF03979 Sigma-70 factor, region 1.1 7 75 1.5E-18 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Pfam PF04542 Sigma-70 region 2 128 197 2.9E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Pfam PF00140 Sigma-70 factor, region 1.2 90 123 5.2E-21 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 SUPERFAMILY SSF88946 89 198 1.44E-55 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 124 361 1.4E-123 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 152 165 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Pfam PF04545 Sigma-70, region 4 296 349 6.4E-20 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Gene3D G3DSA:1.10.10.10 201 276 1.3E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 SUPERFAMILY SSF88659 201 275 2.29E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Gene3D G3DSA:1.10.10.10 284 361 1.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 SUPERFAMILY SSF88659 258 360 4.67E-30 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 124 349 6.4E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Gene3D G3DSA:1.10.220.120 3 64 6.0E-13 T 14-10-2018 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Pfam PF04539 Sigma-70 region 3 207 283 9.1E-32 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tph_c05850 006cbb15caed970ebe59e8d128472ec7 361 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 361 34.624 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Pfam PF11941 Domain of unknown function (DUF3459) 499 585 1.5E-12 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 14 554 7.8E-206 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 3 75 4.7E-8 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Gene3D G3DSA:3.20.20.80 102 507 2.7E-164 T 14-10-2018 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Gene3D G3DSA:1.10.10.760 442 480 2.7E-164 T 14-10-2018 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 SMART SM00642 114 507 3.4E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 PIRSF PIRSF006337 1 592 6.6E-210 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Gene3D G3DSA:2.60.40.10 1 98 1.1E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 SUPERFAMILY SSF51445 89 513 2.34E-112 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 SUPERFAMILY SSF81296 4 94 5.42E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Pfam PF00128 Alpha amylase, catalytic domain 238 436 4.1E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tph_c26460 ad52db92d56cca5b97c1ed565862c788 593 Pfam PF00128 Alpha amylase, catalytic domain 124 208 3.3E-24 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Gene3D G3DSA:3.30.420.340 383 547 8.0E-52 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 602 28.485 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 SUPERFAMILY SSF82771 21 104 8.24E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 SUPERFAMILY SSF46600 193 246 2.75E-12 T 14-10-2018 IPR036876 UVR domain superfamily Tph_c06650 2190d639daffa3e5a922110277e148d7 609 SMART SM00465 21 102 1.8E-22 T 14-10-2018 IPR000305 GIY-YIG endonuclease Tph_c06650 2190d639daffa3e5a922110277e148d7 609 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 584 7.3E-174 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Gene3D G3DSA:3.40.1440.10 7 106 3.9E-34 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 SMART SM00278 583 602 0.33 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 SMART SM00278 551 570 120.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Gene3D G3DSA:1.10.150.20 550 605 2.9E-18 T 14-10-2018 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 SUPERFAMILY SSF47781 512 607 2.29E-20 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Pfam PF02151 UvrB/uvrC motif 211 240 4.5E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Pfam PF12826 Helix-hairpin-helix motif 559 609 8.8E-8 T 14-10-2018 Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Pfam PF01541 GIY-YIG catalytic domain 23 97 7.3E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease Tph_c06650 2190d639daffa3e5a922110277e148d7 609 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 389 536 7.0E-47 T 14-10-2018 IPR001162 UvrC family homology region Tph_c06400 9f1dc3739215980ee5c0204bc40cbb8b 161 Gene3D G3DSA:1.10.10.10 17 74 1.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c06400 9f1dc3739215980ee5c0204bc40cbb8b 161 Hamap MF_00674 UPF0251 protein . 2 89 20.799 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 Tph_c06400 9f1dc3739215980ee5c0204bc40cbb8b 161 Pfam PF02001 Protein of unknown function DUF134 9 87 1.3E-22 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 Tph_c06400 9f1dc3739215980ee5c0204bc40cbb8b 161 SUPERFAMILY SSF88659 26 70 1.81E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c23850 a52c7335ecc00362e031980300cc294f 190 SUPERFAMILY SSF53323 4 187 6.8E-37 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c23850 a52c7335ecc00362e031980300cc294f 190 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 181 3.5E-30 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tph_c23850 a52c7335ecc00362e031980300cc294f 190 Gene3D G3DSA:3.40.920.10 2 187 4.0E-40 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c23850 a52c7335ecc00362e031980300cc294f 190 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 6 184 3.0E-25 T 14-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Gene3D G3DSA:3.40.1190.10 93 304 1.4E-70 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Pfam PF08245 Mur ligase middle domain 109 286 1.9E-29 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 6 447 7.5E-151 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Gene3D G3DSA:3.40.50.720 4 92 2.7E-31 T 14-10-2018 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 SUPERFAMILY SSF53623 90 304 5.65E-65 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 SUPERFAMILY SSF53244 306 446 2.75E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 SUPERFAMILY SSF51984 5 91 1.01E-25 T 14-10-2018 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Gene3D G3DSA:3.90.190.20 305 457 8.6E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 3 453 39.646 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 390 9.8E-17 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tph_c12650 ba6f525ca3d21710c4b3e643ad2adfeb 458 Pfam PF01225 Mur ligase family, catalytic domain 6 104 1.7E-23 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 287 357 1.5E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 SUPERFAMILY SSF103039 25 217 5.76E-46 T 14-10-2018 IPR028976 CheC-like superfamily Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 284 359 1.6E-31 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 Gene3D G3DSA:2.30.330.10 274 367 5.2E-35 T 14-10-2018 IPR036429 SpoA-like superfamily Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 PRINTS PR00956 Flagellar motor switch protein FliN signature 320 333 2.6E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 PRINTS PR00956 Flagellar motor switch protein FliN signature 287 303 2.6E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 PRINTS PR00956 Flagellar motor switch protein FliN signature 333 348 2.6E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 PRINTS PR00956 Flagellar motor switch protein FliN signature 304 320 2.6E-27 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 Pfam PF04509 CheC-like family 126 162 6.3E-12 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 Pfam PF04509 CheC-like family 30 64 6.7E-9 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 Gene3D G3DSA:3.40.1550.10 24 222 2.1E-52 T 14-10-2018 IPR028976 CheC-like superfamily Tph_c10950 55c87897966a83ed0eaa356d341d4d3c 367 SUPERFAMILY SSF101801 285 365 3.01E-24 T 14-10-2018 IPR036429 SpoA-like superfamily Tph_c15050 d7eafd20c93304a0d7371a010b181996 253 Pfam PF07261 Replication initiation and membrane attachment 150 221 3.1E-25 T 14-10-2018 IPR006343 DnaD domain Tph_c15050 d7eafd20c93304a0d7371a010b181996 253 Gene3D G3DSA:1.10.10.10 13 125 2.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c15050 d7eafd20c93304a0d7371a010b181996 253 SUPERFAMILY SSF158499 148 214 5.1E-19 T 14-10-2018 IPR034829 DnaD-like domain superfamily Tph_c15050 d7eafd20c93304a0d7371a010b181996 253 Gene3D G3DSA:1.10.10.630 145 219 6.1E-29 T 14-10-2018 IPR034829 DnaD-like domain superfamily Tph_c15050 d7eafd20c93304a0d7371a010b181996 253 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 148 218 1.7E-19 T 14-10-2018 IPR006343 DnaD domain Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 Gene3D G3DSA:3.40.50.300 10 456 8.6E-166 T 14-10-2018 Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 SUPERFAMILY SSF52540 10 584 4.05E-194 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 Pfam PF01268 Formate--tetrahydrofolate ligase 9 586 1.5E-212 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 349 360 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 Gene3D G3DSA:3.10.410.10 471 560 1.0E-27 T 14-10-2018 Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 7 586 36.229 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c08280 bc4a1b21b24261d0fe1dd1e8016841f7 586 Gene3D G3DSA:3.30.1510.10 137 268 8.6E-166 T 14-10-2018 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 Gene3D G3DSA:3.40.50.2300 153 282 1.9E-95 T 14-10-2018 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 SUPERFAMILY SSF53822 35 382 5.89E-96 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 Pfam PF13458 Periplasmic binding protein 35 378 2.6E-68 T 14-10-2018 IPR028081 Leucine-binding protein domain Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 Gene3D G3DSA:3.40.50.2300 37 360 1.9E-95 T 14-10-2018 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 344 359 1.4E-14 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 36 52 1.4E-14 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 98 108 1.4E-14 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 58 74 1.4E-14 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 77 95 1.4E-14 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c23730 d9121c940825d37d1ad7921151449a5f 389 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 264 282 1.4E-14 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 Gene3D G3DSA:3.10.350.10 101 147 2.1E-19 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 SUPERFAMILY SSF54106 102 147 1.7E-10 T 14-10-2018 Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 SUPERFAMILY SSF54106 48 92 6.54E-11 T 14-10-2018 Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 Gene3D G3DSA:3.10.350.10 46 93 3.6E-17 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 SMART SM00257 48 92 6.9E-12 T 14-10-2018 IPR018392 LysM domain Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 SMART SM00257 103 147 8.0E-14 T 14-10-2018 IPR018392 LysM domain Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 Pfam PF01476 LysM domain 105 147 1.7E-13 T 14-10-2018 IPR018392 LysM domain Tph_c04430 43b6f2c56f9d3e97e8f8d8f5cc789a50 148 Pfam PF01476 LysM domain 51 92 3.8E-11 T 14-10-2018 IPR018392 LysM domain Tph_c18600 2512b64277d6acd5f55030941051d3c1 157 Gene3D G3DSA:2.30.30.40 11 136 4.8E-48 T 14-10-2018 Tph_c18600 2512b64277d6acd5f55030941051d3c1 157 SMART SM00260 5 142 1.6E-49 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c18600 2512b64277d6acd5f55030941051d3c1 157 Gene3D G3DSA:2.40.50.180 28 137 4.8E-48 T 14-10-2018 Tph_c18600 2512b64277d6acd5f55030941051d3c1 157 SUPERFAMILY SSF50341 7 145 7.59E-44 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tph_c18600 2512b64277d6acd5f55030941051d3c1 157 Pfam PF01584 CheW-like domain 9 145 8.3E-42 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c06790 dd9dd09e5b56c99caae99051628be274 75 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 8.5E-13 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tph_c06790 dd9dd09e5b56c99caae99051628be274 75 PRINTS PR01651 Protein-export SecG membrane protein signature 55 75 8.5E-13 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tph_c06790 dd9dd09e5b56c99caae99051628be274 75 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 8.5E-13 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tph_c06790 dd9dd09e5b56c99caae99051628be274 75 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 8.5E-13 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tph_c06790 dd9dd09e5b56c99caae99051628be274 75 Pfam PF03840 Preprotein translocase SecG subunit 5 74 5.1E-16 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tph_c06790 dd9dd09e5b56c99caae99051628be274 75 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 74 2.9E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 SUPERFAMILY SSF52172 2 184 1.07E-47 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 2.4E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 Gene3D G3DSA:1.10.10.10 130 230 3.2E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 SMART SM00448 3 114 1.4E-51 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 Gene3D G3DSA:3.40.50.2300 1 129 1.5E-43 T 14-10-2018 Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 Pfam PF00072 Response regulator receiver domain 5 115 2.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c04840 423c580a0e3f4f061f559397a4f26f8e 230 SMART SM00862 150 226 4.1E-31 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Gene3D G3DSA:3.40.630.40 505 696 1.1E-58 T 14-10-2018 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 SMART SM00646 573 691 8.0E-33 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Gene3D G3DSA:2.30.30.40 229 286 1.4E-16 T 14-10-2018 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Pfam PF08239 Bacterial SH3 domain 234 286 7.2E-13 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Pfam PF11741 AMIN domain 417 495 6.3E-9 T 14-10-2018 IPR021731 AMIN domain Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 SUPERFAMILY SSF50044 252 293 1.72E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Pfam PF00395 S-layer homology domain 46 86 9.9E-15 T 14-10-2018 IPR001119 S-layer homology domain Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Pfam PF00395 S-layer homology domain 162 204 4.4E-13 T 14-10-2018 IPR001119 S-layer homology domain Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Pfam PF00395 S-layer homology domain 103 145 5.0E-14 T 14-10-2018 IPR001119 S-layer homology domain Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 514 691 1.4E-51 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 Gene3D G3DSA:2.60.40.3500 392 504 7.3E-13 T 14-10-2018 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 SUPERFAMILY SSF53187 513 694 2.04E-54 T 14-10-2018 Tph_c04100 4beca8423b237d193af5254a6fe5d3e2 696 SMART SM00287 230 288 2.4E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Tph_c18390 8aca4b6931d7a0074b66b08e031383bb 158 Gene3D G3DSA:2.30.110.10 2 155 9.8E-47 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tph_c18390 8aca4b6931d7a0074b66b08e031383bb 158 SUPERFAMILY SSF50475 4 156 4.61E-44 T 14-10-2018 Tph_c18390 8aca4b6931d7a0074b66b08e031383bb 158 SMART SM00903 8 157 5.1E-37 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c18390 8aca4b6931d7a0074b66b08e031383bb 158 Pfam PF01613 Flavin reductase like domain 10 155 5.1E-30 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c18120 02fb702c30c994130414c490a19a2644 254 SUPERFAMILY SSF75625 5 248 2.09E-89 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tph_c18120 02fb702c30c994130414c490a19a2644 254 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 240 1.9E-94 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tph_c18120 02fb702c30c994130414c490a19a2644 254 Gene3D G3DSA:1.10.10.200 1 81 1.0E-32 T 14-10-2018 IPR017856 Integrase-like, N-terminal Tph_c18120 02fb702c30c994130414c490a19a2644 254 Gene3D G3DSA:3.30.70.980 133 207 2.3E-51 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tph_c18120 02fb702c30c994130414c490a19a2644 254 Pfam PF01709 Transcriptional regulator 5 240 1.2E-88 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tph_c18120 02fb702c30c994130414c490a19a2644 254 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 242 34.734 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tph_c18120 02fb702c30c994130414c490a19a2644 254 Gene3D G3DSA:3.30.70.980 84 239 2.3E-51 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Tph_c08220 d82a63d394e99da88b9801bf611da537 601 SUPERFAMILY SSF48310 210 600 1.44E-137 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c08220 d82a63d394e99da88b9801bf611da537 601 Gene3D G3DSA:1.10.599.10 239 600 1.4E-140 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tph_c08220 d82a63d394e99da88b9801bf611da537 601 Gene3D G3DSA:3.60.9.10 1 210 2.1E-90 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c08220 d82a63d394e99da88b9801bf611da537 601 SMART SM00790 4 206 1.8E-116 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c08220 d82a63d394e99da88b9801bf611da537 601 Gene3D G3DSA:1.10.569.10 241 428 1.4E-140 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tph_c08220 d82a63d394e99da88b9801bf611da537 601 SUPERFAMILY SSF56228 1 210 4.19E-78 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c08220 d82a63d394e99da88b9801bf611da537 601 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 219 600 6.1E-141 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c08220 d82a63d394e99da88b9801bf611da537 601 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 205 2.1E-82 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c04180 d82a63d394e99da88b9801bf611da537 601 SUPERFAMILY SSF48310 210 600 1.44E-137 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c04180 d82a63d394e99da88b9801bf611da537 601 Gene3D G3DSA:1.10.599.10 239 600 1.4E-140 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tph_c04180 d82a63d394e99da88b9801bf611da537 601 Gene3D G3DSA:3.60.9.10 1 210 2.1E-90 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c04180 d82a63d394e99da88b9801bf611da537 601 SMART SM00790 4 206 1.8E-116 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c04180 d82a63d394e99da88b9801bf611da537 601 Gene3D G3DSA:1.10.569.10 241 428 1.4E-140 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tph_c04180 d82a63d394e99da88b9801bf611da537 601 SUPERFAMILY SSF56228 1 210 4.19E-78 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c04180 d82a63d394e99da88b9801bf611da537 601 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 219 600 6.1E-141 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c04180 d82a63d394e99da88b9801bf611da537 601 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 6 205 2.1E-82 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c15070 6aad31dad5df01709f44c11f3b5d05fb 403 Gene3D G3DSA:3.40.640.10 71 290 7.0E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c15070 6aad31dad5df01709f44c11f3b5d05fb 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 240 253 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tph_c15070 6aad31dad5df01709f44c11f3b5d05fb 403 SUPERFAMILY SSF53383 16 394 1.84E-124 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c15070 6aad31dad5df01709f44c11f3b5d05fb 403 Gene3D G3DSA:3.90.1150.10 36 387 7.0E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c15070 6aad31dad5df01709f44c11f3b5d05fb 403 Pfam PF00155 Aminotransferase class I and II 41 387 3.6E-74 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tph_c13050 aabcdea7b62124fad09b90cb12fadaa0 322 SUPERFAMILY SSF56266 5 319 1.54E-72 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c13050 aabcdea7b62124fad09b90cb12fadaa0 322 Pfam PF03576 Peptidase family S58 5 313 2.0E-55 T 14-10-2018 IPR005321 Peptidase S58, DmpA Tph_c13050 aabcdea7b62124fad09b90cb12fadaa0 322 Gene3D G3DSA:3.60.70.12 1 309 6.1E-112 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Tph_c16190 3807a1f74b5eab9f7452099194ea91ba 373 Pfam PF12555 Thiamine pyrophosphokinase C terminal 320 370 8.5E-18 T 14-10-2018 IPR022215 Thiamine pyrophosphokinase C-terminal Tph_c16190 3807a1f74b5eab9f7452099194ea91ba 373 Gene3D G3DSA:3.40.50.10240 160 243 4.1E-11 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c16190 3807a1f74b5eab9f7452099194ea91ba 373 SUPERFAMILY SSF63999 137 322 1.96E-29 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c18440 122040758097722a9d46404793078608 597 Gene3D G3DSA:1.20.1440.230 438 536 4.6E-36 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 SUPERFAMILY SSF52833 5 94 1.23E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c18440 122040758097722a9d46404793078608 597 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 549 560 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c18440 122040758097722a9d46404793078608 597 SUPERFAMILY SSF142984 352 435 2.09E-26 T 14-10-2018 Tph_c18440 122040758097722a9d46404793078608 597 Gene3D G3DSA:3.10.20.600 343 437 1.4E-33 T 14-10-2018 Tph_c18440 122040758097722a9d46404793078608 597 SUPERFAMILY SSF54862 542 594 1.36E-16 T 14-10-2018 Tph_c18440 122040758097722a9d46404793078608 597 Gene3D G3DSA:3.30.70.20 538 596 3.6E-15 T 14-10-2018 Tph_c18440 122040758097722a9d46404793078608 597 SUPERFAMILY SSF140490 436 538 2.09E-40 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 Gene3D G3DSA:3.40.30.10 4 99 6.6E-31 T 14-10-2018 Tph_c18440 122040758097722a9d46404793078608 597 SMART SM00928 440 485 1.9E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 Pfam PF10531 SLBB domain 354 402 1.5E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 453 464 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 Gene3D G3DSA:3.40.50.11540 164 342 3.7E-81 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 SUPERFAMILY SSF142019 111 351 4.58E-96 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 5 81 2.1E-9 T 14-10-2018 Tph_c18440 122040758097722a9d46404793078608 597 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 159 330 2.1E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 442 525 2.6E-35 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18440 122040758097722a9d46404793078608 597 Pfam PF00037 4Fe-4S binding domain 543 565 2.7E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c18440 122040758097722a9d46404793078608 597 Pfam PF00037 4Fe-4S binding domain 573 589 5.7E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c28880 b8d39e5fba72404cd177a074975a4d77 190 TIGRFAM TIGR02175 PorC_KorC: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 7 184 1.6E-27 T 14-10-2018 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate GO:0016625|GO:0055114 Tph_c28880 b8d39e5fba72404cd177a074975a4d77 190 Gene3D G3DSA:3.40.920.10 2 186 2.3E-41 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c28880 b8d39e5fba72404cd177a074975a4d77 190 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 13 182 2.0E-30 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tph_c28880 b8d39e5fba72404cd177a074975a4d77 190 SUPERFAMILY SSF53323 4 184 6.54E-35 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c06130 53837bfbb3c185b67fc3d412e82b44db 103 Gene3D G3DSA:3.30.110.70 1 103 1.6E-44 T 14-10-2018 Tph_c06130 53837bfbb3c185b67fc3d412e82b44db 103 Pfam PF01906 Putative heavy-metal-binding 1 103 1.0E-40 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 Tph_c06130 53837bfbb3c185b67fc3d412e82b44db 103 SUPERFAMILY SSF117782 1 103 8.37E-38 T 14-10-2018 IPR035439 UPF0145 domain superfamily Tph_c06130 53837bfbb3c185b67fc3d412e82b44db 103 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.417 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 Tph_c23760 5d280a054ed7deb2d6db7f6b3662a832 255 Pfam PF00005 ABC transporter 21 180 1.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c23760 5d280a054ed7deb2d6db7f6b3662a832 255 Gene3D G3DSA:3.40.50.300 1 252 5.7E-63 T 14-10-2018 Tph_c23760 5d280a054ed7deb2d6db7f6b3662a832 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 1.1E-12 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Tph_c23760 5d280a054ed7deb2d6db7f6b3662a832 255 SUPERFAMILY SSF52540 4 252 5.43E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23760 5d280a054ed7deb2d6db7f6b3662a832 255 SMART SM00382 29 228 2.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 Pfam PF02910 Fumarate reductase flavoprotein C-term 430 515 1.5E-17 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 SUPERFAMILY SSF46977 420 515 1.96E-30 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 364 6.8E-6 T 14-10-2018 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.8E-6 T 14-10-2018 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 Gene3D G3DSA:1.20.58.100 411 502 5.6E-24 T 14-10-2018 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 Gene3D G3DSA:3.90.700.10 235 345 3.0E-158 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 Pfam PF00890 FAD binding domain 7 379 1.2E-96 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 PIRSF PIRSF000171 2 517 8.2E-37 T 14-10-2018 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 Gene3D G3DSA:3.50.50.60 7 391 3.0E-158 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 SUPERFAMILY SSF56425 225 339 1.2E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 SUPERFAMILY SSF51905 5 416 1.12E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 342 364 1.1E-8 T 14-10-2018 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.1E-8 T 14-10-2018 Tph_c26620 370d88db66a8575fd3a1243ad1ed024b 517 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 502 1.0E-169 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tph_c11430 79912c5563dd4678d0f64e70e7114796 299 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 151 245 2.1E-9 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Tph_c11430 79912c5563dd4678d0f64e70e7114796 299 Gene3D G3DSA:3.40.50.720 10 290 1.7E-96 T 14-10-2018 Tph_c11430 79912c5563dd4678d0f64e70e7114796 299 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 7 291 4.3E-98 T 14-10-2018 IPR014215 Dipicolinic acid synthetase subunit A Tph_c11430 79912c5563dd4678d0f64e70e7114796 299 Gene3D G3DSA:3.40.50.720 128 274 1.7E-96 T 14-10-2018 Tph_c11430 79912c5563dd4678d0f64e70e7114796 299 SUPERFAMILY SSF51735 142 253 1.15E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c11430 79912c5563dd4678d0f64e70e7114796 299 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 9 124 2.4E-25 T 14-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal Tph_c26990 28ad5eaf5b632f92606b87e1ef59b8e6 127 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 43 127 1.0E-12 T 14-10-2018 IPR012504 Sporulation protein YabP Tph_c26990 28ad5eaf5b632f92606b87e1ef59b8e6 127 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 42 127 7.8E-26 T 14-10-2018 IPR012504 Sporulation protein YabP Tph_c26990 28ad5eaf5b632f92606b87e1ef59b8e6 127 Pfam PF07873 YabP family 42 106 7.4E-19 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC Tph_c26990 28ad5eaf5b632f92606b87e1ef59b8e6 127 Gene3D G3DSA:2.60.40.2000 49 106 3.5E-20 T 14-10-2018 IPR038705 YabP superfamily Tph_c07940 5b13f32b307f2949ac6d2639e833c69d 508 Gene3D G3DSA:3.40.50.300 1 298 2.0E-17 T 14-10-2018 Tph_c07940 5b13f32b307f2949ac6d2639e833c69d 508 SUPERFAMILY SSF52540 1 281 1.9E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c07940 5b13f32b307f2949ac6d2639e833c69d 508 Pfam PF13175 AAA ATPase domain 147 275 2.3E-10 T 14-10-2018 Tph_c18490 9cdd5d6ac303518f0a85150514d4b685 257 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 218 3.6E-50 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tph_c18490 9cdd5d6ac303518f0a85150514d4b685 257 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 240 9.5E-67 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tph_c18490 9cdd5d6ac303518f0a85150514d4b685 257 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 246 15.568 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 Gene3D G3DSA:3.30.70.120 1 105 1.2E-36 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 PRINTS PR00340 P-II protein signature 48 71 8.4E-35 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 PRINTS PR00340 P-II protein signature 23 41 8.4E-35 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 PRINTS PR00340 P-II protein signature 2 17 8.4E-35 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 PRINTS PR00340 P-II protein signature 79 99 8.4E-35 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 ProSitePatterns PS00638 P-II protein C-terminal region signature. 79 92 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 SUPERFAMILY SSF54913 2 104 4.77E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 SMART SM00938 4 101 3.9E-52 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08660 6c648ede3d2e2a4d6ba26166e08461a8 105 Pfam PF00543 Nitrogen regulatory protein P-II 4 101 3.9E-34 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Gene3D G3DSA:3.40.50.300 271 408 1.1E-54 T 14-10-2018 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Pfam PF12344 Ultra-violet resistance protein B 546 587 1.3E-23 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 SMART SM00490 454 540 2.9E-20 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 2 654 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 SUPERFAMILY SSF52540 32 565 2.56E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Gene3D G3DSA:3.40.50.300 409 590 3.8E-53 T 14-10-2018 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Pfam PF00271 Helicase conserved C-terminal domain 435 538 9.6E-18 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Gene3D G3DSA:3.40.50.300 1 238 2.2E-78 T 14-10-2018 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Pfam PF02151 UvrB/uvrC motif 621 656 5.1E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Gene3D G3DSA:4.10.860.10 609 660 2.0E-8 T 14-10-2018 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 656 43.854 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 Pfam PF04851 Type III restriction enzyme, res subunit 10 133 1.1E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 SUPERFAMILY SSF52540 3 409 8.61E-135 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 SUPERFAMILY SSF46600 613 656 8.89E-11 T 14-10-2018 IPR036876 UVR domain superfamily Tph_c06630 09b89522e2ec9eb1ad3722405c555d4e 713 SMART SM00487 4 420 6.0E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c09900 bc62b21ad2c96f7209564d971607742d 267 Gene3D G3DSA:3.20.20.150 14 262 1.2E-46 T 14-10-2018 Tph_c09900 bc62b21ad2c96f7209564d971607742d 267 Pfam PF01261 Xylose isomerase-like TIM barrel 44 216 4.2E-13 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Tph_c09900 bc62b21ad2c96f7209564d971607742d 267 SUPERFAMILY SSF51658 40 242 5.24E-31 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Tph_c19900 e087aa7683d2882f18b72f226c140ec8 142 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 61 79 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Tph_c19900 e087aa7683d2882f18b72f226c140ec8 142 Gene3D G3DSA:1.10.10.10 10 142 2.9E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c19900 e087aa7683d2882f18b72f226c140ec8 142 SUPERFAMILY SSF46785 15 138 5.03E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c19900 e087aa7683d2882f18b72f226c140ec8 142 Pfam PF02082 Transcriptional regulator 15 95 1.3E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tph_c19900 e087aa7683d2882f18b72f226c140ec8 142 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 15 137 1.6E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 SUPERFAMILY SSF53927 226 533 2.31E-114 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 Gene3D G3DSA:3.40.140.20 223 376 1.0E-54 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 SMART SM00851 24 138 3.2E-56 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 12 533 42.399 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 Gene3D G3DSA:3.40.50.1380 9 201 2.0E-86 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 Pfam PF02142 MGS-like domain 24 138 2.0E-28 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 PIRSF PIRSF000414 7 533 2.8E-200 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 13 533 1.5E-201 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 SMART SM00798 143 468 2.8E-164 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 Gene3D G3DSA:3.40.140.20 408 533 2.4E-53 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 SUPERFAMILY SSF52335 12 201 2.62E-70 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Tph_c08500 b9a5cae00e3aaccb2b2fbfa72202140d 533 Pfam PF01808 AICARFT/IMPCHase bienzyme 143 466 2.1E-106 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 325 420 1.5E-18 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 192 5.1E-38 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 SMART SM00984 325 421 6.1E-23 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 Gene3D G3DSA:3.40.50.720 2 208 2.0E-59 T 14-10-2018 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 213 301 4.3E-22 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 PIRSF PIRSF000124 8 433 1.2E-69 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 PIRSF PIRSF500136 1 434 1.0E-109 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 SUPERFAMILY SSF48179 211 301 4.59E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 SUPERFAMILY SSF52413 316 430 1.7E-20 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 9 417 1.6E-101 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 Gene3D G3DSA:3.40.50.720 211 434 1.2E-50 T 14-10-2018 Tph_c08150 884cedb0bb01ffe7975248054c25bb8f 434 SUPERFAMILY SSF51735 8 201 3.44E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c25490 4d58453c093be2e5724d86f252ed51c1 333 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 4 327 2.7E-97 T 14-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme Tph_c25490 4d58453c093be2e5724d86f252ed51c1 333 PIRSF PIRSF004869 2 308 3.3E-90 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Tph_c25490 4d58453c093be2e5724d86f252ed51c1 333 Pfam PF04055 Radical SAM superfamily 79 232 5.3E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c25490 4d58453c093be2e5724d86f252ed51c1 333 Gene3D G3DSA:3.20.20.70 62 273 5.5E-35 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c25490 4d58453c093be2e5724d86f252ed51c1 333 SUPERFAMILY SSF102114 38 302 8.63E-38 T 14-10-2018 Tph_c25490 4d58453c093be2e5724d86f252ed51c1 333 Pfam PF13353 4Fe-4S single cluster domain 79 181 1.2E-4 T 14-10-2018 Tph_c10870 4e018e33ce59a08560b2c7ca8826634d 177 SUPERFAMILY SSF158791 112 166 2.35E-9 T 14-10-2018 Tph_c10870 4e018e33ce59a08560b2c7ca8826634d 177 Pfam PF03448 MgtE intracellular N domain 113 166 1.7E-7 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Tph_c26520 8176628adc012ed7290e39fc0d00909a 272 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 258 35.48 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Tph_c26520 8176628adc012ed7290e39fc0d00909a 272 SUPERFAMILY SSF51366 10 258 3.53E-85 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c26520 8176628adc012ed7290e39fc0d00909a 272 Pfam PF00218 Indole-3-glycerol phosphate synthase 3 256 4.0E-85 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Tph_c26520 8176628adc012ed7290e39fc0d00909a 272 Gene3D G3DSA:3.20.20.70 1 267 1.8E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26520 8176628adc012ed7290e39fc0d00909a 272 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 52 70 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 253 362 4.8E-21 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 SUPERFAMILY SSF53738 5 133 7.06E-38 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 124 9.1E-35 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 228 243 4.1E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 165 184 4.1E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 199 212 4.1E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 4.1E-23 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Gene3D G3DSA:3.40.120.10 167 244 4.9E-31 T 14-10-2018 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 368 437 3.8E-9 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 150 248 8.0E-27 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Gene3D G3DSA:3.30.310.50 365 451 7.7E-25 T 14-10-2018 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 SUPERFAMILY SSF53738 149 251 6.67E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 SUPERFAMILY SSF55957 361 446 1.55E-23 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 SUPERFAMILY SSF53738 252 359 6.28E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Gene3D G3DSA:3.40.120.10 1 146 1.2E-50 T 14-10-2018 Tph_c29090 84ed2213b6306d802962e77cd28a3b14 457 Gene3D G3DSA:3.40.120.10 246 363 7.3E-37 T 14-10-2018 Tph_c19180 8b0da1f3cc124077cabf9d77dbcc62a2 78 Pfam PF13192 Thioredoxin domain 1 76 2.5E-29 T 14-10-2018 IPR012336 Thioredoxin-like fold Tph_c19180 8b0da1f3cc124077cabf9d77dbcc62a2 78 Gene3D G3DSA:3.40.30.10 1 75 2.3E-32 T 14-10-2018 Tph_c19180 8b0da1f3cc124077cabf9d77dbcc62a2 78 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 6.8E-30 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 Tph_c19180 8b0da1f3cc124077cabf9d77dbcc62a2 78 SUPERFAMILY SSF52833 2 75 3.32E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c19180 8b0da1f3cc124077cabf9d77dbcc62a2 78 PIRSF PIRSF037031 1 77 1.8E-34 T 14-10-2018 IPR005243 Redox-active disulphide protein 2 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 Pfam PF00035 Double-stranded RNA binding motif 160 226 7.9E-18 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 Pfam PF14622 Ribonuclease-III-like 19 141 4.2E-37 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 SUPERFAMILY SSF69065 4 162 2.44E-49 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 SUPERFAMILY SSF54768 114 229 4.87E-24 T 14-10-2018 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 Gene3D G3DSA:3.30.160.20 158 230 6.2E-23 T 14-10-2018 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 SMART SM00358 160 227 1.1E-21 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 223 31.5 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 Gene3D G3DSA:1.10.1520.10 4 152 3.5E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 225 5.8E-79 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Tph_c10140 717bd64f960c40f2b6b7567685eb5160 235 SMART SM00535 20 154 4.1E-54 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 SUPERFAMILY SSF52540 195 388 1.13E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 284 1.1E-71 T 14-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 SMART SM00962 197 388 7.1E-66 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 Gene3D G3DSA:3.40.50.300 192 376 1.1E-74 T 14-10-2018 Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 Pfam PF00448 SRP54-type protein, GTPase domain 199 387 5.2E-44 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 SMART SM00382 196 396 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c11030 a9716d53341839e1f64ed0c02bdeae1f 415 Gene3D G3DSA:1.20.120.1380 140 379 1.1E-74 T 14-10-2018 Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 197 1.6E-68 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 4 182 3.7E-52 T 14-10-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 SUPERFAMILY SSF53254 2 202 6.02E-67 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 SMART SM00855 3 157 1.5E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 Gene3D G3DSA:3.40.50.1240 1 205 3.4E-73 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tph_c11710 b455cd3706f1ed5b9971ac9914214ba1 206 PIRSF PIRSF000709 2 185 4.7E-18 T 14-10-2018 Tph_c09050 25dba0ed3d4f6c827b3fc1c35de053d2 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 363 4.4E-54 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Tph_c09050 25dba0ed3d4f6c827b3fc1c35de053d2 367 Pfam PF03845 Spore germination protein 6 319 7.0E-43 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 Tph_c22600 c8f6ef0526d728a3c1fe2471cc14cdd0 87 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 4.8E-19 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c22600 c8f6ef0526d728a3c1fe2471cc14cdd0 87 Pfam PF09723 Zinc ribbon domain 1 40 2.1E-15 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c22600 c8f6ef0526d728a3c1fe2471cc14cdd0 87 SMART SM00834 1 41 2.9E-17 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c07000 977f26d67732da170d6cd14ec31d24ba 286 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 33 272 3.0E-89 T 14-10-2018 IPR013366 Ethanolamine utilisation EutJ Tph_c07000 977f26d67732da170d6cd14ec31d24ba 286 Gene3D G3DSA:3.30.420.40 143 258 3.3E-93 T 14-10-2018 Tph_c07000 977f26d67732da170d6cd14ec31d24ba 286 Gene3D G3DSA:3.30.420.40 30 272 3.3E-93 T 14-10-2018 Tph_c07000 977f26d67732da170d6cd14ec31d24ba 286 Pfam PF11104 Type IV pilus assembly protein PilM; 142 256 1.4E-13 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tph_c07000 977f26d67732da170d6cd14ec31d24ba 286 SUPERFAMILY SSF53067 30 276 3.19E-26 T 14-10-2018 Tph_c04580 97e013771aa3fd6831a2932ec9c5524a 133 SUPERFAMILY SSF143422 6 131 9.94E-46 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tph_c04580 97e013771aa3fd6831a2932ec9c5524a 133 SMART SM01321 13 130 5.2E-44 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tph_c04580 97e013771aa3fd6831a2932ec9c5524a 133 Pfam PF01797 Transposase IS200 like 13 130 2.3E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tph_c04580 97e013771aa3fd6831a2932ec9c5524a 133 Gene3D G3DSA:3.30.70.1290 1 129 1.6E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tph_c10670 f4ef288df99e3bc25097f61333482806 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 5.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c10670 f4ef288df99e3bc25097f61333482806 127 Gene3D G3DSA:1.10.10.10 9 122 8.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c10670 f4ef288df99e3bc25097f61333482806 127 SUPERFAMILY SSF46785 5 79 9.92E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c10670 f4ef288df99e3bc25097f61333482806 127 SMART SM00345 16 75 1.2E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c10670 f4ef288df99e3bc25097f61333482806 127 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 6.0E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c10670 f4ef288df99e3bc25097f61333482806 127 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 6.0E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 SUPERFAMILY SSF57783 5 99 4.93E-39 T 14-10-2018 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Gene3D G3DSA:3.90.980.10 108 235 1.0E-34 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Gene3D G3DSA:3.90.580.10 3 102 5.8E-43 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Pfam PF13662 Toprim domain 255 330 2.2E-19 T 14-10-2018 IPR006171 TOPRIM domain Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Hamap MF_00974 DNA primase [dnaG]. 4 584 27.995 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Gene3D G3DSA:3.40.1360.10 236 359 2.3E-40 T 14-10-2018 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 SMART SM00400 36 90 1.0E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 SUPERFAMILY SSF56731 116 418 2.09E-91 T 14-10-2018 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 TIGRFAM TIGR01391 dnaG: DNA primase 6 411 2.7E-135 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Pfam PF01807 CHC2 zinc finger 6 100 1.7E-40 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 246 9.2E-33 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 Pfam PF10410 DnaB-helicase binding domain of primase 363 417 1.1E-10 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 PIRSF PIRSF002811 3 594 2.6E-160 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Tph_c05840 085ad1810c7129421dec0c890307d9e9 598 SMART SM00493 254 325 6.1E-16 T 14-10-2018 IPR006171 TOPRIM domain Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Gene3D G3DSA:3.30.70.20 557 584 3.7E-5 T 14-10-2018 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 146 317 3.2E-49 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Gene3D G3DSA:3.40.30.10 2 95 3.2E-19 T 14-10-2018 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Pfam PF00037 4Fe-4S binding domain 560 581 4.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Pfam PF00037 4Fe-4S binding domain 530 552 2.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Gene3D G3DSA:3.10.20.600 330 424 1.5E-34 T 14-10-2018 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 429 512 3.3E-31 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 SUPERFAMILY SSF140490 424 525 1.83E-37 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Gene3D G3DSA:3.30.70.20 519 556 2.2E-7 T 14-10-2018 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 SUPERFAMILY SSF52833 2 90 1.68E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 SUPERFAMILY SSF142984 339 422 4.32E-26 T 14-10-2018 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 536 547 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Pfam PF10531 SLBB domain 341 389 3.3E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 SUPERFAMILY SSF54862 529 583 7.15E-16 T 14-10-2018 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Gene3D G3DSA:3.40.50.11540 151 329 1.5E-80 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 SUPERFAMILY SSF142019 99 338 1.96E-89 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 SMART SM00928 427 472 5.4E-21 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 Gene3D G3DSA:1.20.1440.230 425 518 2.3E-32 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04210 c1a41cc0ea2b8efe53db28fd50242681 584 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 440 451 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 SUPERFAMILY SSF52440 7 100 2.69E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 Gene3D G3DSA:3.30.1490.20 115 188 7.6E-80 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 SUPERFAMILY SSF56059 100 311 2.57E-56 T 14-10-2018 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 Gene3D G3DSA:3.40.50.20 6 88 8.8E-30 T 14-10-2018 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 Gene3D G3DSA:3.30.470.20 89 307 7.6E-80 T 14-10-2018 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 Pfam PF07478 D-ala D-ala ligase C-terminus 111 310 1.9E-62 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 Pfam PF01820 D-ala D-ala ligase N-terminus 8 90 3.1E-19 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 SMART SM01209 99 288 7.7E-4 T 14-10-2018 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 7 314 38.35 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 67 78 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 8 313 2.2E-98 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 PIRSF PIRSF039102 46 321 1.7E-96 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c13150 13cbdec11a6e899d125b0820ec4358c7 322 PIRSF PIRSF039102 4 56 2.6E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c18570 3393913978453ae6f4906de72c822df1 528 SUPERFAMILY SSF64153 1 254 4.58E-67 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Tph_c18570 3393913978453ae6f4906de72c822df1 528 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 235 516 8.8E-72 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tph_c18570 3393913978453ae6f4906de72c822df1 528 SUPERFAMILY SSF53613 228 516 2.55E-76 T 14-10-2018 IPR029056 Ribokinase-like Tph_c18570 3393913978453ae6f4906de72c822df1 528 PIRSF PIRSF017184 1 524 2.1E-146 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Tph_c18570 3393913978453ae6f4906de72c822df1 528 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 217 1.1E-47 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tph_c18570 3393913978453ae6f4906de72c822df1 528 Pfam PF01256 Carbohydrate kinase 255 513 1.4E-62 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tph_c18570 3393913978453ae6f4906de72c822df1 528 Pfam PF03853 YjeF-related protein N-terminus 27 196 5.6E-50 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tph_c18570 3393913978453ae6f4906de72c822df1 528 Gene3D G3DSA:3.40.1190.20 226 518 1.2E-91 T 14-10-2018 IPR029056 Ribokinase-like Tph_c18570 3393913978453ae6f4906de72c822df1 528 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 456 466 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Tph_c18570 3393913978453ae6f4906de72c822df1 528 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 217 27.154 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Tph_c18570 3393913978453ae6f4906de72c822df1 528 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 232 521 25.208 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tph_c18570 3393913978453ae6f4906de72c822df1 528 Gene3D G3DSA:3.40.50.10260 2 223 3.7E-72 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Tph_c25220 682006ef3d81f399a23e8c0f1eafe9a9 309 SMART SM00382 28 219 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c25220 682006ef3d81f399a23e8c0f1eafe9a9 309 Gene3D G3DSA:3.40.50.300 1 232 1.3E-69 T 14-10-2018 Tph_c25220 682006ef3d81f399a23e8c0f1eafe9a9 309 Pfam PF00005 ABC transporter 19 162 4.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c25220 682006ef3d81f399a23e8c0f1eafe9a9 309 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c25220 682006ef3d81f399a23e8c0f1eafe9a9 309 SUPERFAMILY SSF52540 3 227 1.87E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 2 212 9.3E-99 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 Hamap MF_00494 Probable transaldolase [tal]. 1 215 46.52 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 SUPERFAMILY SSF51569 2 213 1.99E-75 T 14-10-2018 Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 ProSitePatterns PS00958 Transaldolase active site. 81 98 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 Gene3D G3DSA:3.20.20.70 1 218 8.4E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c27820 bb40e0cf3f7c47088fd52cd1e17a9ae9 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 4.9E-56 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 Gene3D G3DSA:3.40.50.12740 9 148 2.8E-38 T 14-10-2018 Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 Pfam PF13614 AAA domain 150 314 4.4E-14 T 14-10-2018 IPR025669 AAA domain Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 SUPERFAMILY SSF52172 7 134 2.85E-35 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 SUPERFAMILY SSF52540 149 387 6.68E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 Pfam PF00072 Response regulator receiver domain 11 122 2.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 SMART SM00448 9 122 3.1E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05490 9eaf701a0b898e1e130f1cc50259d8f6 414 Gene3D G3DSA:3.40.50.300 149 386 2.4E-59 T 14-10-2018 Tph_c18040 d38ef604fd3bd0638dcc61c3fe49dcfe 361 Gene3D G3DSA:3.20.20.70 136 327 1.7E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c18040 d38ef604fd3bd0638dcc61c3fe49dcfe 361 SUPERFAMILY SSF54675 37 143 2.88E-27 T 14-10-2018 Tph_c18040 d38ef604fd3bd0638dcc61c3fe49dcfe 361 SUPERFAMILY SSF51690 142 358 1.96E-58 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Tph_c18040 d38ef604fd3bd0638dcc61c3fe49dcfe 361 Gene3D G3DSA:3.90.1170.20 31 135 2.6E-30 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Tph_c18040 d38ef604fd3bd0638dcc61c3fe49dcfe 361 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 65 141 1.8E-9 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Tph_c18040 d38ef604fd3bd0638dcc61c3fe49dcfe 361 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 145 333 3.5E-21 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Tph_c03710 53e914b514705c4cefcadf2b0e3f1c0a 353 ProSitePatterns PS00112 Phosphagen kinase active site signature. 170 176 - T 14-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 Tph_c03710 53e914b514705c4cefcadf2b0e3f1c0a 353 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 353 34.609 T 14-10-2018 IPR023660 Protein arginine kinase GO:0016775 Tph_c03710 53e914b514705c4cefcadf2b0e3f1c0a 353 SUPERFAMILY SSF55931 6 271 8.97E-82 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tph_c03710 53e914b514705c4cefcadf2b0e3f1c0a 353 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 74 256 1.7E-69 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 Tph_c03710 53e914b514705c4cefcadf2b0e3f1c0a 353 Gene3D G3DSA:3.30.590.10 9 268 1.4E-72 T 14-10-2018 Tph_c01560 9617e766f111f4f0934d50b52869151f 264 Gene3D G3DSA:3.40.50.300 1 255 4.3E-74 T 14-10-2018 Tph_c01560 9617e766f111f4f0934d50b52869151f 264 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c01560 9617e766f111f4f0934d50b52869151f 264 SUPERFAMILY SSF52540 2 226 2.24E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01560 9617e766f111f4f0934d50b52869151f 264 SMART SM00382 26 214 6.6E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c01560 9617e766f111f4f0934d50b52869151f 264 Pfam PF00005 ABC transporter 17 165 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c25690 f2159051e0607b6e4831c30a69335680 121 SUPERFAMILY SSF53137 6 119 9.53E-55 T 14-10-2018 Tph_c25690 f2159051e0607b6e4831c30a69335680 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 121 1.8E-42 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25690 f2159051e0607b6e4831c30a69335680 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 121 4.4E-50 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25690 f2159051e0607b6e4831c30a69335680 121 Gene3D G3DSA:3.30.420.100 4 121 3.9E-47 T 14-10-2018 Tph_c25690 f2159051e0607b6e4831c30a69335680 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 30.211 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Gene3D G3DSA:1.10.260.30 327 448 4.2E-43 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 SUPERFAMILY SSF52540 43 354 1.68E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 SUPERFAMILY SSF47446 327 431 5.23E-36 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Gene3D G3DSA:3.40.50.300 91 285 3.1E-128 T 14-10-2018 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 SMART SM00963 2 87 3.4E-32 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.8E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 430 1.0E-187 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Pfam PF02978 Signal peptide binding domain 327 427 6.8E-33 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Pfam PF00448 SRP54-type protein, GTPase domain 102 296 8.5E-77 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Gene3D G3DSA:1.20.120.140 6 306 3.1E-128 T 14-10-2018 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 SMART SM00962 101 296 4.4E-116 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 SMART SM00382 100 247 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10220 7223dc60f9a58514d1feeb9d2a00a4b1 451 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 444 35.064 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 SUPERFAMILY SSF54862 309 393 3.63E-19 T 14-10-2018 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 Pfam PF00037 4Fe-4S binding domain 370 391 1.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 Pfam PF01180 Dihydroorotate dehydrogenase 4 305 8.7E-28 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 SUPERFAMILY SSF51395 1 322 2.15E-48 T 14-10-2018 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 94 321 5.8E-45 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 376 387 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 Gene3D G3DSA:3.20.20.70 4 312 1.5E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 Gene3D G3DSA:3.30.70.20 325 367 1.1E-5 T 14-10-2018 Tph_c24020 f72a211d6470ce8ce04a8693e12a3575 397 Gene3D G3DSA:3.30.70.20 368 396 5.6E-6 T 14-10-2018 Tph_c02390 4a834b6e7f11642907d87307f5bd0a88 72 Pfam PF11148 Protein of unknown function (DUF2922) 4 69 1.0E-24 T 14-10-2018 IPR021321 Protein of unknown function DUF2922 Tph_c16430 c3df501141c5052f6f80e7bca56b4a29 128 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 27 127 1.4E-33 T 14-10-2018 IPR014211 Stage III sporulation protein AD Tph_c16430 c3df501141c5052f6f80e7bca56b4a29 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 3 57 5.6E-11 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family Tph_c16430 c3df501141c5052f6f80e7bca56b4a29 128 Pfam PF06686 Stage III sporulation protein AC/AD protein family 71 126 2.0E-20 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family Tph_c22230 2373abd8c481029df759f429321684f0 428 PIRSF PIRSF004911 55 428 4.3E-137 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Tph_c22230 2373abd8c481029df759f429321684f0 428 SUPERFAMILY SSF102114 166 407 2.75E-32 T 14-10-2018 Tph_c22230 2373abd8c481029df759f429321684f0 428 Pfam PF12544 Lysine-2,3-aminomutase 372 428 5.8E-16 T 14-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain Tph_c22230 2373abd8c481029df759f429321684f0 428 Pfam PF04055 Radical SAM superfamily 179 296 7.3E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c22230 2373abd8c481029df759f429321684f0 428 TIGRFAM TIGR00238 TIGR00238: KamA family protein 71 390 1.1E-100 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase Tph_c22230 2373abd8c481029df759f429321684f0 428 TIGRFAM TIGR04368 Glu_2_3_NH3_mut: glutamate 2,3-aminomutase 25 426 2.0E-214 T 14-10-2018 IPR030801 Glutamate 2,3-aminomutase GO:0016869 Tph_c22230 2373abd8c481029df759f429321684f0 428 Gene3D G3DSA:3.20.20.70 115 399 2.0E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 PIRSF PIRSF000728 10 293 9.2E-112 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 Gene3D G3DSA:3.40.1160.10 3 294 6.2E-100 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 Hamap MF_00082 Acetylglutamate kinase [argB]. 24 286 49.941 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 SUPERFAMILY SSF53633 2 293 3.4E-91 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 PRINTS PR00474 Glutamate 5-kinase family signature 243 263 6.3E-11 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 PRINTS PR00474 Glutamate 5-kinase family signature 56 70 6.3E-11 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 PRINTS PR00474 Glutamate 5-kinase family signature 190 217 6.3E-11 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 TIGRFAM TIGR00761 argB: acetylglutamate kinase 26 268 4.4E-79 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c25460 fcaf6742d518b40a21ac5c6f18abeb24 294 Pfam PF00696 Amino acid kinase family 26 270 5.9E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 5 154 3.7E-43 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 5 140 2.0E-35 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 SUPERFAMILY SSF56271 4 154 1.54E-41 T 14-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 Gene3D G3DSA:3.30.60.30 1 42 2.1E-18 T 14-10-2018 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 Gene3D G3DSA:3.50.20.10 43 154 3.9E-43 T 14-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 4 153 8.4E-46 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c09800 be7c0758539c2c729824fa30752c367b 154 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 154 42.847 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 Gene3D G3DSA:3.40.50.300 505 632 7.6E-14 T 14-10-2018 Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 Gene3D G3DSA:3.40.50.300 11 225 1.4E-24 T 14-10-2018 Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 SMART SM00487 36 246 1.4E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 SUPERFAMILY SSF52540 47 623 1.94E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 SMART SM00490 517 610 5.8E-10 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 Pfam PF00271 Helicase conserved C-terminal domain 542 608 1.4E-7 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c19050 95655b927b2abe2f154f24d4bcda8eb4 971 Pfam PF00270 DEAD/DEAH box helicase 42 215 5.5E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SUPERFAMILY SSF54980 400 478 1.26E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 108.971 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Gene3D G3DSA:3.40.50.300 1 292 1.9E-110 T 14-10-2018 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SMART SM00889 478 596 1.5E-66 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SUPERFAMILY SSF54211 477 596 5.82E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Gene3D G3DSA:3.30.70.870 404 481 8.7E-33 T 14-10-2018 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 687 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Pfam PF00679 Elongation factor G C-terminus 598 683 6.4E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Gene3D G3DSA:3.30.70.240 602 672 1.1E-88 T 14-10-2018 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SMART SM00838 598 685 5.0E-47 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Pfam PF03144 Elongation factor Tu domain 2 322 389 9.2E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SUPERFAMILY SSF54980 598 684 4.75E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like Tph_c25880 04846914766df81b3a7674c2b710d18e 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 1.0E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SUPERFAMILY SSF50447 264 402 1.06E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Pfam PF14492 Elongation Factor G, domain II 402 476 8.5E-35 T 14-10-2018 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Pfam PF03764 Elongation factor G, domain IV 477 596 1.1E-43 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 SUPERFAMILY SSF52540 6 280 1.01E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Gene3D G3DSA:3.30.230.10 482 684 1.1E-88 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 3.2E-67 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.2E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.2E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25880 04846914766df81b3a7674c2b710d18e 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tph_c25880 04846914766df81b3a7674c2b710d18e 695 Gene3D G3DSA:2.40.30.10 293 403 5.3E-42 T 14-10-2018 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 SMART SM00388 241 307 4.6E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 Gene3D G3DSA:1.20.1480.50 154 240 4.7E-10 T 14-10-2018 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 SUPERFAMILY SSF158472 188 237 6.41E-7 T 14-10-2018 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 Gene3D G3DSA:3.30.565.10 314 458 3.8E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 Gene3D G3DSA:1.10.287.130 241 306 2.3E-16 T 14-10-2018 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 455 6.4E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 SUPERFAMILY SSF55874 313 457 6.81E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 SMART SM00304 188 240 2.7E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 305 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 SUPERFAMILY SSF47384 224 305 9.61E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c23640 3bd335ecdc78a5e74637e46fcc3e8ebf 459 SMART SM00387 350 457 3.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c21870 9347e1b3b04c1cc08075b7c045c8a7ec 172 Gene3D G3DSA:3.40.50.1820 24 170 1.7E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tph_c21870 9347e1b3b04c1cc08075b7c045c8a7ec 172 SUPERFAMILY SSF53474 26 147 6.24E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tph_c21870 9347e1b3b04c1cc08075b7c045c8a7ec 172 PRINTS PR00111 Alpha/beta hydrolase fold signature 64 79 5.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tph_c21870 9347e1b3b04c1cc08075b7c045c8a7ec 172 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 5.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tph_c21870 9347e1b3b04c1cc08075b7c045c8a7ec 172 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 5.3E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tph_c21870 9347e1b3b04c1cc08075b7c045c8a7ec 172 Pfam PF00561 alpha/beta hydrolase fold 44 141 1.0E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Tph_c05270 f528f8de2a4606b28a5e8510ef98ce73 241 SUPERFAMILY SSF53790 1 239 3.53E-60 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c05270 f528f8de2a4606b28a5e8510ef98ce73 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 1 239 1.7E-93 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Tph_c05270 f528f8de2a4606b28a5e8510ef98ce73 241 Gene3D G3DSA:3.30.950.10 111 240 4.1E-53 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tph_c05270 f528f8de2a4606b28a5e8510ef98ce73 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 205 1.1E-36 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c05270 f528f8de2a4606b28a5e8510ef98ce73 241 Gene3D G3DSA:3.40.1010.10 1 110 2.0E-29 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c00480 5147df3291f1cf8a2854f93a346311fe 261 Pfam PF00005 ABC transporter 19 179 4.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c00480 5147df3291f1cf8a2854f93a346311fe 261 SMART SM00382 28 228 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c00480 5147df3291f1cf8a2854f93a346311fe 261 Gene3D G3DSA:3.40.50.300 2 254 1.4E-65 T 14-10-2018 Tph_c00480 5147df3291f1cf8a2854f93a346311fe 261 SUPERFAMILY SSF52540 2 251 1.26E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00480 5147df3291f1cf8a2854f93a346311fe 261 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 230 251 9.3E-13 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Tph_c20830 8c111302d2ae6b299c104c92fb9b1e2f 77 SMART SM00966 6 51 3.1E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c20830 8c111302d2ae6b299c104c92fb9b1e2f 77 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 47 4.0E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c20830 8c111302d2ae6b299c104c92fb9b1e2f 77 SUPERFAMILY SSF89447 1 68 2.96E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c20830 8c111302d2ae6b299c104c92fb9b1e2f 77 Gene3D G3DSA:2.10.260.10 1 77 2.0E-25 T 14-10-2018 Tph_c14630 2e212c542d39a43fd20bb8ab42f3c910 506 Gene3D G3DSA:2.60.40.10 233 334 4.8E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c17860 2576026f015545ec16f26ea301a74e27 366 SMART SM00876 256 358 9.3E-30 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tph_c17860 2576026f015545ec16f26ea301a74e27 366 Gene3D G3DSA:3.20.20.70 13 363 6.1E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c17860 2576026f015545ec16f26ea301a74e27 366 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 5 365 7.0E-141 T 14-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 Tph_c17860 2576026f015545ec16f26ea301a74e27 366 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 357 3.5E-24 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 Tph_c17860 2576026f015545ec16f26ea301a74e27 366 SUPERFAMILY SSF102114 35 355 1.31E-50 T 14-10-2018 Tph_c17860 2576026f015545ec16f26ea301a74e27 366 Pfam PF04055 Radical SAM superfamily 80 221 9.6E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c08340 da811706772c309af1e9265e1f1b4cd6 166 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 38.393 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08340 da811706772c309af1e9265e1f1b4cd6 166 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.8E-67 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08340 da811706772c309af1e9265e1f1b4cd6 166 Gene3D G3DSA:3.30.70.640 1 161 7.3E-70 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08340 da811706772c309af1e9265e1f1b4cd6 166 SUPERFAMILY SSF55040 11 155 3.79E-63 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08340 da811706772c309af1e9265e1f1b4cd6 166 Pfam PF01967 MoaC family 15 150 3.7E-57 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c07020 a5f94e480eb623e05fd74bf77532bdb1 100 Gene3D G3DSA:2.40.50.220 1 99 7.1E-34 T 14-10-2018 IPR036677 EutN/Ccml superfamily Tph_c07020 a5f94e480eb623e05fd74bf77532bdb1 100 SUPERFAMILY SSF159133 1 90 4.05E-31 T 14-10-2018 IPR036677 EutN/Ccml superfamily Tph_c07020 a5f94e480eb623e05fd74bf77532bdb1 100 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 2.3E-31 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tph_c07020 a5f94e480eb623e05fd74bf77532bdb1 100 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 12 83 5.0E-12 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 Pfam PF07501 G5 domain 151 224 3.1E-17 T 14-10-2018 IPR011098 G5 domain Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 Pfam PF03990 Domain of unknown function (DUF348) 95 134 1.5E-10 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 Pfam PF03990 Domain of unknown function (DUF348) 38 75 1.9E-8 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 Pfam PF06725 3D domain 266 326 7.1E-21 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 SMART SM01208 147 226 1.2E-18 T 14-10-2018 IPR011098 G5 domain Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 SUPERFAMILY SSF50685 266 314 2.93E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily Tph_c28700 efa3aa1af4836bb0f74b10d21752a328 326 Gene3D G3DSA:2.20.230.10 125 224 2.3E-14 T 14-10-2018 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 Gene3D G3DSA:3.30.43.10 4 90 1.5E-26 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 SUPERFAMILY SSF56194 201 302 1.07E-37 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 Pfam PF01565 FAD binding domain 37 164 3.6E-21 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 Gene3D G3DSA:3.30.465.10 92 217 9.0E-38 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 Gene3D G3DSA:3.90.78.10 218 303 1.3E-33 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 300 4.8E-30 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 24 301 1.9E-77 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 SUPERFAMILY SSF56176 23 209 4.11E-44 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tph_c12660 8c69477be9281fa4d6d5b3045c53e071 304 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 304 89.808 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c02980 bff259c6a436aabfa942a8b85809220e 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 10.702 T 14-10-2018 IPR022907 VapC family GO:0004540 Tph_c02980 bff259c6a436aabfa942a8b85809220e 139 Gene3D G3DSA:3.40.50.1010 4 126 1.3E-27 T 14-10-2018 Tph_c02980 bff259c6a436aabfa942a8b85809220e 139 Pfam PF01850 PIN domain 4 124 1.1E-16 T 14-10-2018 IPR002716 PIN domain Tph_c02980 bff259c6a436aabfa942a8b85809220e 139 SUPERFAMILY SSF88723 4 126 4.49E-21 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c15610 4081b917deaa77f91be087b9dac50bc3 442 SUPERFAMILY SSF50156 7 99 1.05E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c15610 4081b917deaa77f91be087b9dac50bc3 442 Gene3D G3DSA:3.20.20.70 114 258 2.1E-5 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c15610 4081b917deaa77f91be087b9dac50bc3 442 Gene3D G3DSA:2.30.42.10 2 76 2.8E-6 T 14-10-2018 Tph_c15610 4081b917deaa77f91be087b9dac50bc3 442 Pfam PF04459 Protein of unknown function (DUF512) 225 426 1.3E-59 T 14-10-2018 IPR007549 Domain of unknown function DUF512 Tph_c15610 4081b917deaa77f91be087b9dac50bc3 442 SUPERFAMILY SSF102114 91 264 5.1E-11 T 14-10-2018 Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SUPERFAMILY SSF49452 285 379 2.16E-5 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 Gene3D G3DSA:2.60.40.10 387 492 4.6E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 Pfam PF17210 SdrD B-like domain 391 443 1.5E-8 T 14-10-2018 IPR033764 SD-repeat containing protein, B domain Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1209 1235 270.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1248 1274 470.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1093 1118 290.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1304 1339 1600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1282 1303 1400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1153 1179 81.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SMART SM00710 1120 1145 72.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 Gene3D G3DSA:2.60.40.10 873 963 3.1E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SUPERFAMILY SSF117074 171 244 1.44E-6 T 14-10-2018 Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SUPERFAMILY SSF81296 874 957 4.37E-8 T 14-10-2018 IPR014756 Immunoglobulin E-set Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SUPERFAMILY SSF51126 969 1519 1.05E-37 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Tph_c18770 06e3ce8e367dd600a6e330ba922958a5 1524 SUPERFAMILY SSF117074 388 443 4.18E-7 T 14-10-2018 Tph_c22700 a0c76a0be1c6bdc2abb4b87965ca72c2 135 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tph_c22700 a0c76a0be1c6bdc2abb4b87965ca72c2 135 SUPERFAMILY SSF53927 6 126 8.2E-38 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c22700 a0c76a0be1c6bdc2abb4b87965ca72c2 135 Gene3D G3DSA:3.40.140.10 1 129 1.5E-42 T 14-10-2018 Tph_c22700 a0c76a0be1c6bdc2abb4b87965ca72c2 135 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 98 4.5E-14 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tph_c22700 a0c76a0be1c6bdc2abb4b87965ca72c2 135 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 9 127 8.9E-36 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 Gene3D G3DSA:1.10.1670.10 18 210 9.9E-79 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 SMART SM00478 45 192 5.8E-61 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 TIGRFAM TIGR01083 nth: endonuclease III 12 201 3.4E-74 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 Hamap MF_00942 Endonuclease III [nth]. 5 216 38.429 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 PIRSF PIRSF001435 4 217 2.2E-54 T 14-10-2018 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 41 175 2.9E-24 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 SMART SM00525 193 213 0.004 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 SUPERFAMILY SSF48150 11 212 1.73E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Tph_c18730 834e90296a088ac90d6e4fd5c431a995 219 Gene3D G3DSA:1.10.340.30 28 139 9.9E-79 T 14-10-2018 Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 PIRSF PIRSF006246 1 121 2.4E-56 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 Pfam PF02261 Aspartate decarboxylase 2 114 8.1E-56 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 124 74.009 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 2 122 4.7E-53 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 SUPERFAMILY SSF50692 2 115 1.62E-51 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 95 4.0E-35 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 Tph_c26700 2a83bad3520e4c211b214da41121acc7 124 Gene3D G3DSA:2.40.40.20 1 122 1.4E-57 T 14-10-2018 Tph_c19770 4abe726c06aebb2a9461a9401a6afb46 245 Pfam PF05949 Bacterial protein of unknown function (DUF881) 88 241 4.2E-45 T 14-10-2018 IPR010273 Protein of unknown function DUF881 Tph_c19770 4abe726c06aebb2a9461a9401a6afb46 245 Gene3D G3DSA:3.30.70.1880 87 245 3.3E-42 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 299 1.4E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 Gene3D G3DSA:3.50.50.60 112 236 1.0E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 SUPERFAMILY SSF51905 3 188 8.64E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 1.3E-15 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 102 111 1.3E-15 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 144 169 1.3E-15 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 230 244 1.3E-15 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 SUPERFAMILY SSF51905 144 309 1.94E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 2.6E-23 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.6E-23 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 2.6E-23 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 2.6E-23 T 14-10-2018 Tph_c08580 56ea10e3d8a2c5ca08da71915edf5c27 426 Gene3D G3DSA:3.50.50.60 5 307 1.0E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 SUPERFAMILY SSF47729 1 90 1.91E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 SMART SM00411 1 90 2.2E-48 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 Gene3D G3DSA:4.10.520.10 1 90 2.0E-39 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 6.3E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 6.3E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 6.3E-22 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tph_c28220 37ecc0bb676e0c07fdcae5d592b79d2c 90 Pfam PF00216 Bacterial DNA-binding protein 1 89 6.0E-36 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 Gene3D G3DSA:3.40.50.2300 1 131 2.8E-36 T 14-10-2018 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 241 5.9E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 210 225 5.9E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 SMART SM00342 157 241 3.0E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 SUPERFAMILY SSF46689 194 244 7.17E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 SUPERFAMILY SSF52172 1 131 9.11E-37 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 SUPERFAMILY SSF46689 141 191 8.72E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 Gene3D G3DSA:1.10.10.60 190 245 1.1E-20 T 14-10-2018 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 Pfam PF12833 Helix-turn-helix domain 163 243 7.5E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 SMART SM00448 1 115 2.0E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 Gene3D G3DSA:1.10.10.60 140 189 2.5E-16 T 14-10-2018 Tph_c20610 4e97079f99d394ef84244149ce1fcdf3 246 Pfam PF00072 Response regulator receiver domain 3 115 2.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c14170 91290718127d8171497e15ecb02d24bd 251 SUPERFAMILY SSF52540 29 198 7.81E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14170 91290718127d8171497e15ecb02d24bd 251 Gene3D G3DSA:3.40.50.300 28 189 1.7E-9 T 14-10-2018 Tph_c14170 91290718127d8171497e15ecb02d24bd 251 SMART SM00382 41 189 3.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c14170 91290718127d8171497e15ecb02d24bd 251 Pfam PF13401 AAA domain 41 170 1.2E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 SUPERFAMILY SSF51905 5 366 5.19E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 426 1.1E-196 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 4 432 35.035 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 336 359 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 Pfam PF01134 Glucose inhibited division protein A 4 367 3.1E-104 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 Gene3D G3DSA:3.50.50.60 3 176 1.4E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c10730 2bd65f316165ba7a1a15c4e7ce417513 434 Gene3D G3DSA:3.50.50.60 291 433 3.4E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 603 614 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 SUPERFAMILY SSF140490 459 560 6.02E-36 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 SUPERFAMILY SSF52833 28 118 2.57E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 182 353 9.1E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Gene3D G3DSA:3.40.30.10 31 125 1.1E-12 T 14-10-2018 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 SUPERFAMILY SSF142019 139 374 7.72E-88 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 SUPERFAMILY SSF142984 376 458 1.83E-23 T 14-10-2018 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Gene3D G3DSA:1.20.1440.230 461 557 2.2E-33 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 SMART SM00928 463 508 6.2E-22 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 SUPERFAMILY SSF54862 565 616 5.52E-11 T 14-10-2018 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Pfam PF10531 SLBB domain 377 426 3.6E-7 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Gene3D G3DSA:3.10.20.600 366 459 7.0E-33 T 14-10-2018 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Gene3D G3DSA:3.30.70.20 565 619 8.4E-8 T 14-10-2018 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 465 548 1.0E-31 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14880 f41e47e6d2153cce2f119479687b19ee 640 Gene3D G3DSA:3.40.50.11540 187 365 1.7E-78 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 Gene3D G3DSA:2.30.170.50 1 67 7.9E-28 T 14-10-2018 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 57 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 24.607 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 PRINTS PR01249 Ribosomal protein L31 signature 31 46 7.6E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.6E-9 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 Pfam PF01197 Ribosomal protein L31 1 66 1.4E-29 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 SUPERFAMILY SSF143800 1 66 7.85E-24 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c27580 5ff6473911857932798c97f7f21a342f 67 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 3.6E-27 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21440 4706f9b8312689e00e17fc129db6a6a2 391 SUPERFAMILY SSF51306 284 377 3.14E-10 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tph_c21440 4706f9b8312689e00e17fc129db6a6a2 391 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 288 384 1.6E-24 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Tph_c21440 4706f9b8312689e00e17fc129db6a6a2 391 Gene3D G3DSA:2.10.109.10 281 388 3.7E-6 T 14-10-2018 Tph_c21440 4706f9b8312689e00e17fc129db6a6a2 391 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 349 360 9.4E-6 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Tph_c21440 4706f9b8312689e00e17fc129db6a6a2 391 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 291 306 9.4E-6 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 Tph_c21440 4706f9b8312689e00e17fc129db6a6a2 391 Pfam PF00717 Peptidase S24-like 291 344 1.9E-8 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tph_c08000 d814911ef1ae76a6267d10ce7b824797 88 SUPERFAMILY SSF49367 2 88 1.11E-32 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Tph_c08000 d814911ef1ae76a6267d10ce7b824797 88 Gene3D G3DSA:2.60.40.730 1 88 9.4E-33 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Tph_c08000 d814911ef1ae76a6267d10ce7b824797 88 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 4 88 1.0E-22 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Tph_c08000 d814911ef1ae76a6267d10ce7b824797 88 Pfam PF01880 Desulfoferrodoxin 5 88 2.3E-19 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Tph_c08550 171576c0cc158fb4b8760e71c64930ba 369 Pfam PF13522 Glutamine amidotransferase domain 177 267 1.3E-9 T 14-10-2018 Tph_c08550 171576c0cc158fb4b8760e71c64930ba 369 SUPERFAMILY SSF56235 13 355 2.4E-77 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c08550 171576c0cc158fb4b8760e71c64930ba 369 Gene3D G3DSA:3.60.20.10 49 341 3.8E-46 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c08550 171576c0cc158fb4b8760e71c64930ba 369 PIRSF PIRSF018774 1 368 1.1E-163 T 14-10-2018 IPR012375 Glutamate synthase large subunit domain 1 stand-alone protein Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 4 308 1.0E-84 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 Pfam PF01895 PhoU domain 340 426 2.7E-15 T 14-10-2018 IPR026022 PhoU domain Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 Pfam PF01895 PhoU domain 445 529 8.4E-15 T 14-10-2018 IPR026022 PhoU domain Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 Gene3D G3DSA:1.20.58.220 441 533 7.7E-21 T 14-10-2018 IPR038078 PhoU-like domain superfamily Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 Pfam PF02690 Na+/Pi-cotransporter 163 252 1.0E-19 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 Pfam PF02690 Na+/Pi-cotransporter 14 149 3.9E-51 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 SUPERFAMILY SSF109755 321 531 5.86E-51 T 14-10-2018 Tph_c06440 4c2b0f2c965b707d823b193a8188b79e 534 Gene3D G3DSA:1.20.58.220 332 436 1.4E-18 T 14-10-2018 IPR038078 PhoU-like domain superfamily Tph_c25050 c2a5edd2e72c5cb32761d2be9d6d8a3e 138 Pfam PF01850 PIN domain 6 125 9.3E-14 T 14-10-2018 IPR002716 PIN domain Tph_c25050 c2a5edd2e72c5cb32761d2be9d6d8a3e 138 Gene3D G3DSA:3.40.50.1010 4 131 4.6E-16 T 14-10-2018 Tph_c25050 c2a5edd2e72c5cb32761d2be9d6d8a3e 138 SUPERFAMILY SSF88723 4 133 2.35E-21 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c23090 4409fcd9cd3a0e74eb36b79cb15bf66f 199 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 1 190 8.8E-33 T 14-10-2018 IPR006490 Phage major tail protein, phi13 family Tph_c03800 3741ae97f82511614eeef5f44e253f4a 219 SUPERFAMILY SSF109604 31 202 1.96E-36 T 14-10-2018 Tph_c03800 3741ae97f82511614eeef5f44e253f4a 219 Gene3D G3DSA:1.10.3210.10 28 211 1.8E-59 T 14-10-2018 Tph_c03800 3741ae97f82511614eeef5f44e253f4a 219 TIGRFAM TIGR00277 HDIG: HDIG domain 41 132 5.9E-8 T 14-10-2018 IPR006675 HDIG domain Tph_c03800 3741ae97f82511614eeef5f44e253f4a 219 Pfam PF01966 HD domain 43 164 1.9E-22 T 14-10-2018 IPR006674 HD domain Tph_c03800 3741ae97f82511614eeef5f44e253f4a 219 SMART SM00471 38 173 5.4E-11 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c24180 0aee8a43c643b749b1b9c1024e0e5874 214 SUPERFAMILY SSF53098 117 173 1.38E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c24180 0aee8a43c643b749b1b9c1024e0e5874 214 Pfam PF13276 HTH-like domain 64 107 2.8E-11 T 14-10-2018 IPR025948 HTH-like domain Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 6.3E-24 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.2E-27 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Gene3D G3DSA:2.30.30.30 1 62 1.3E-31 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 2.7E-82 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 SMART SM00841 129 184 1.3E-34 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Gene3D G3DSA:2.40.50.140 128 185 3.5E-29 T 14-10-2018 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 SMART SM01185 67 121 1.2E-28 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 SUPERFAMILY SSF50249 65 129 1.16E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 PIRSF PIRSF005901 1 185 5.4E-74 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 6.6E-30 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 SUPERFAMILY SSF50249 129 185 2.36E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Gene3D G3DSA:2.40.50.140 64 127 3.7E-28 T 14-10-2018 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.967 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Tph_c16480 29ffc8ca0d1946b1a1095e7a01d7865d 185 SUPERFAMILY SSF50104 1 62 9.63E-23 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tph_c00830 ac053229fd2c71f3f6b614d7cba8cf06 520 SUPERFAMILY SSF144010 13 517 1.7E-39 T 14-10-2018 Tph_c00830 ac053229fd2c71f3f6b614d7cba8cf06 520 Pfam PF01996 F420-0:Gamma-glutamyl ligase 16 513 7.6E-79 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Tph_c00830 ac053229fd2c71f3f6b614d7cba8cf06 520 Gene3D G3DSA:3.30.1330.100 9 125 6.2E-10 T 14-10-2018 Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 Pfam PF03948 Ribosomal protein L9, C-terminal domain 67 150 2.2E-28 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 SUPERFAMILY SSF55653 59 149 9.16E-27 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 4 151 25.895 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 Gene3D G3DSA:3.40.5.10 4 66 1.4E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 TIGRFAM TIGR00158 L9: ribosomal protein bL9 4 150 5.6E-41 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 SUPERFAMILY SSF55658 4 57 4.19E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 Gene3D G3DSA:3.10.430.100 67 151 3.1E-30 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Tph_c00780 858ef4d312f65e3c4ab1ff2835c2778b 153 Pfam PF01281 Ribosomal protein L9, N-terminal domain 4 49 1.4E-23 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21030 1a9ef3ae83358039dd871cf8db43b81c 253 Pfam PF02361 Cobalt transport protein 13 223 7.1E-36 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tph_c07250 7e5550be9a02a07bcb5223eb3fcaeb75 128 Pfam PF04026 SpoVG 23 101 1.2E-30 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Tph_c07250 7e5550be9a02a07bcb5223eb3fcaeb75 128 Gene3D G3DSA:3.30.1120.40 22 118 2.6E-33 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Tph_c07250 7e5550be9a02a07bcb5223eb3fcaeb75 128 SUPERFAMILY SSF160537 23 108 7.19E-32 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Tph_c08050 d0397590611a251de9441879c4985b22 589 SUPERFAMILY SSF142019 104 341 8.11E-94 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 569 580 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08050 d0397590611a251de9441879c4985b22 589 SMART SM00928 430 475 1.2E-23 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 Gene3D G3DSA:3.40.30.10 6 100 7.1E-17 T 14-10-2018 Tph_c08050 d0397590611a251de9441879c4985b22 589 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 431 515 2.0E-33 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 Gene3D G3DSA:3.10.20.600 333 427 7.5E-32 T 14-10-2018 Tph_c08050 d0397590611a251de9441879c4985b22 589 SUPERFAMILY SSF140490 426 528 9.42E-39 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 Gene3D G3DSA:3.30.70.20 532 585 2.5E-12 T 14-10-2018 Tph_c08050 d0397590611a251de9441879c4985b22 589 SUPERFAMILY SSF52833 3 96 6.15E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c08050 d0397590611a251de9441879c4985b22 589 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 149 320 5.5E-50 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 SUPERFAMILY SSF142984 342 425 1.7E-23 T 14-10-2018 Tph_c08050 d0397590611a251de9441879c4985b22 589 Gene3D G3DSA:1.20.1440.230 428 531 1.1E-35 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 Pfam PF00037 4Fe-4S binding domain 533 555 4.6E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08050 d0397590611a251de9441879c4985b22 589 Pfam PF00037 4Fe-4S binding domain 563 580 6.0E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08050 d0397590611a251de9441879c4985b22 589 Pfam PF10531 SLBB domain 344 392 1.3E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 Gene3D G3DSA:3.40.50.11540 154 332 1.2E-82 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08050 d0397590611a251de9441879c4985b22 589 SUPERFAMILY SSF54862 533 582 3.29E-14 T 14-10-2018 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 Hamap MF_00542 Probable butyrate kinase [buk]. 1 366 150.2 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 PIRSF PIRSF036458 5 359 2.6E-150 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 Gene3D G3DSA:3.30.420.40 10 358 7.4E-148 T 14-10-2018 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 SUPERFAMILY SSF53067 7 176 5.18E-66 T 14-10-2018 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 Pfam PF00871 Acetokinase family 10 326 8.5E-62 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 PRINTS PR00471 Acetate kinase family signature 183 204 8.1E-16 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 PRINTS PR00471 Acetate kinase family signature 300 316 8.1E-16 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 PRINTS PR00471 Acetate kinase family signature 277 290 8.1E-16 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 PRINTS PR00471 Acetate kinase family signature 9 20 8.1E-16 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 10 356 1.4E-149 T 14-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 Gene3D G3DSA:3.30.420.40 141 335 7.4E-148 T 14-10-2018 Tph_c04780 dc12fcd71c08b6426bb5fb46201be061 366 SUPERFAMILY SSF53067 121 351 9.86E-50 T 14-10-2018 Tph_c28790 705d6f0be4817f67d816378686cefdf6 214 SUPERFAMILY SSF52540 3 197 1.28E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28790 705d6f0be4817f67d816378686cefdf6 214 Pfam PF02223 Thymidylate kinase 8 196 3.7E-49 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Tph_c28790 705d6f0be4817f67d816378686cefdf6 214 Gene3D G3DSA:3.40.50.300 1 207 7.6E-65 T 14-10-2018 Tph_c28790 705d6f0be4817f67d816378686cefdf6 214 Hamap MF_00165 Thymidylate kinase [tmk]. 4 205 29.305 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tph_c28790 705d6f0be4817f67d816378686cefdf6 214 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tph_c28790 705d6f0be4817f67d816378686cefdf6 214 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 8.5E-52 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tph_c20440 635e2014b7642917f05eb06235127535 282 SMART SM01221 163 277 2.6E-69 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20440 635e2014b7642917f05eb06235127535 282 Gene3D G3DSA:3.30.70.670 164 281 9.0E-38 T 14-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20440 635e2014b7642917f05eb06235127535 282 SMART SM01222 1 162 2.2E-90 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tph_c20440 635e2014b7642917f05eb06235127535 282 SUPERFAMILY SSF55116 163 278 1.88E-43 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tph_c20440 635e2014b7642917f05eb06235127535 282 Pfam PF02971 Formiminotransferase domain 164 267 8.6E-26 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20440 635e2014b7642917f05eb06235127535 282 TIGRFAM TIGR02024 FtcD: glutamate formiminotransferase 1 279 3.5E-122 T 14-10-2018 IPR004227 Formiminotransferase catalytic domain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20440 635e2014b7642917f05eb06235127535 282 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 1 161 7.1E-64 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tph_c20440 635e2014b7642917f05eb06235127535 282 Gene3D G3DSA:3.30.990.10 1 162 6.3E-62 T 14-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tph_c20440 635e2014b7642917f05eb06235127535 282 SUPERFAMILY SSF55116 1 161 6.28E-62 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Gene3D G3DSA:2.40.340.10 329 402 2.5E-19 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 168 7.4E-34 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 SUPERFAMILY SSF63867 329 401 3.53E-15 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Pfam PF12727 PBP superfamily domain 425 614 3.9E-68 T 14-10-2018 IPR024370 PBP domain Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Gene3D G3DSA:2.170.190.11 60 142 6.7E-79 T 14-10-2018 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 SUPERFAMILY SSF53850 412 629 2.33E-18 T 14-10-2018 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 SMART SM00852 181 318 3.4E-32 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Gene3D G3DSA:3.90.105.10 37 175 6.7E-79 T 14-10-2018 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Pfam PF00994 Probable molybdopterin binding domain 183 315 1.5E-15 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 SUPERFAMILY SSF53218 178 322 4.97E-34 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 SUPERFAMILY SSF63882 12 175 1.7E-39 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Gene3D G3DSA:3.40.980.10 176 316 6.7E-79 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Pfam PF03454 MoeA C-terminal region (domain IV) 331 400 1.1E-12 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08320 222b520efede88d053a2e39cb8f204ee 642 Gene3D G3DSA:3.40.190.10 493 581 3.7E-9 T 14-10-2018 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 SUPERFAMILY SSF53623 100 334 3.89E-72 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Pfam PF01225 Mur ligase family, catalytic domain 24 91 2.2E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Gene3D G3DSA:3.90.190.20 339 493 2.2E-62 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Pfam PF08245 Mur ligase middle domain 109 314 8.3E-56 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Gene3D G3DSA:3.40.1190.10 100 338 3.2E-86 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 490 1.0E-161 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 335 420 2.1E-24 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Gene3D G3DSA:3.40.1390.10 8 99 5.1E-24 T 14-10-2018 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 SUPERFAMILY SSF53244 335 491 5.36E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 SUPERFAMILY SSF63418 8 100 3.01E-22 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Tph_c12590 3f7b87aeca5b90f59702b6e525566990 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 489 35.232 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Tph_c17720 f757bb76d8a59bc4cc8e014872cf6ab6 219 Pfam PF00395 S-layer homology domain 31 73 3.2E-11 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17720 f757bb76d8a59bc4cc8e014872cf6ab6 219 Pfam PF00395 S-layer homology domain 180 202 1.3E-5 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17720 f757bb76d8a59bc4cc8e014872cf6ab6 219 Pfam PF00395 S-layer homology domain 99 140 4.5E-4 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17750 f757bb76d8a59bc4cc8e014872cf6ab6 219 Pfam PF00395 S-layer homology domain 31 73 3.2E-11 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17750 f757bb76d8a59bc4cc8e014872cf6ab6 219 Pfam PF00395 S-layer homology domain 180 202 1.3E-5 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17750 f757bb76d8a59bc4cc8e014872cf6ab6 219 Pfam PF00395 S-layer homology domain 99 140 4.5E-4 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 521 613 8.3E-11 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 218 298 1.4E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 SUPERFAMILY SSF52540 305 541 1.93E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 Gene3D G3DSA:3.40.50.300 1 301 3.2E-90 T 14-10-2018 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 Gene3D G3DSA:3.40.50.300 303 621 2.8E-87 T 14-10-2018 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 SMART SM00382 330 520 6.9E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 SMART SM00382 26 217 5.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 Pfam PF00005 ABC transporter 17 171 9.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 220 280 3.9E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 522 595 9.8E-13 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 Pfam PF00005 ABC transporter 321 471 3.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c17950 04a73f2dfdc443e229e4e05bd369c2bc 624 SUPERFAMILY SSF52540 1 240 6.19E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12370 a0d084167ba958fcbd5cfbcf55cd18b9 374 SUPERFAMILY SSF51713 3 367 2.88E-158 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tph_c12370 a0d084167ba958fcbd5cfbcf55cd18b9 374 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 371 9.3E-162 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tph_c12370 a0d084167ba958fcbd5cfbcf55cd18b9 374 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 367 55.685 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tph_c12370 a0d084167ba958fcbd5cfbcf55cd18b9 374 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 364 7.2E-91 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tph_c12370 a0d084167ba958fcbd5cfbcf55cd18b9 374 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 370 7.0E-157 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tph_c12370 a0d084167ba958fcbd5cfbcf55cd18b9 374 Gene3D G3DSA:3.20.20.105 2 374 5.7E-171 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 629 767 1.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c05090 8ff452b816748ae50d056604c587b395 911 SUPERFAMILY SSF50341 767 895 3.4E-26 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Gene3D G3DSA:3.30.565.10 581 767 7.8E-55 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c05090 8ff452b816748ae50d056604c587b395 911 SUPERFAMILY SSF47384 513 581 7.45E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Gene3D G3DSA:2.30.30.40 768 890 5.5E-25 T 14-10-2018 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Gene3D G3DSA:1.10.287.560 513 580 3.0E-8 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Gene3D G3DSA:2.40.50.180 791 850 5.5E-25 T 14-10-2018 Tph_c05090 8ff452b816748ae50d056604c587b395 911 SMART SM01231 512 580 4.8E-7 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 514 579 4.2E-12 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Tph_c05090 8ff452b816748ae50d056604c587b395 911 SUPERFAMILY SSF55874 583 766 1.44E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c05090 8ff452b816748ae50d056604c587b395 911 SMART SM00260 760 895 1.3E-16 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05090 8ff452b816748ae50d056604c587b395 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 684 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c05090 8ff452b816748ae50d056604c587b395 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 728 746 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c05090 8ff452b816748ae50d056604c587b395 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 712 722 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c05090 8ff452b816748ae50d056604c587b395 911 PRINTS PR00344 Bacterial sensor protein C-terminal signature 752 765 1.0E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Gene3D G3DSA:1.20.120.160 3 141 1.8E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tph_c05090 8ff452b816748ae50d056604c587b395 911 SUPERFAMILY SSF47226 6 127 7.72E-28 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Tph_c05090 8ff452b816748ae50d056604c587b395 911 SMART SM00387 625 768 3.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c05090 8ff452b816748ae50d056604c587b395 911 Pfam PF01627 Hpt domain 8 97 9.5E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tph_c05090 8ff452b816748ae50d056604c587b395 911 Pfam PF01584 CheW-like domain 773 895 1.1E-17 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05090 8ff452b816748ae50d056604c587b395 911 SMART SM00073 4 102 1.0E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Tph_c06020 945a60e6e9f67c23ea44b07efa0fdd6e 266 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 260 1.2E-123 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 Tph_c06020 945a60e6e9f67c23ea44b07efa0fdd6e 266 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 217 7.7E-24 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c06020 945a60e6e9f67c23ea44b07efa0fdd6e 266 Gene3D G3DSA:3.40.50.300 1 249 7.4E-69 T 14-10-2018 Tph_c06020 945a60e6e9f67c23ea44b07efa0fdd6e 266 PIRSF PIRSF003092 1 266 1.4E-89 T 14-10-2018 IPR025501 ATP binding protein MinD Tph_c06020 945a60e6e9f67c23ea44b07efa0fdd6e 266 SUPERFAMILY SSF52540 1 245 9.0E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04910 4d85321a2109c45c109a7a739b830743 886 SUPERFAMILY SSF47323 579 834 1.08E-75 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 866 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Gene3D G3DSA:3.40.50.620 27 528 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Gene3D G3DSA:3.90.740.10 180 347 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Gene3D G3DSA:1.10.730.10 7 747 0.0 T 14-10-2018 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 SUPERFAMILY SSF50677 197 346 1.44E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Gene3D G3DSA:1.10.287.380 813 885 6.0E-21 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 SUPERFAMILY SSF46589 820 884 3.14E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Pfam PF08264 Anticodon-binding domain of tRNA 613 759 6.0E-49 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 566 3.9E-209 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 820 885 1.8E-18 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 Hamap MF_02004 Valine--tRNA ligase [valS]. 7 885 16.028 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 2.0E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 2.0E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 PRINTS PR00986 Valyl-tRNA synthetase signature 479 497 2.0E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 PRINTS PR00986 Valyl-tRNA synthetase signature 448 469 2.0E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 2.0E-38 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Tph_c04910 4d85321a2109c45c109a7a739b830743 886 SUPERFAMILY SSF52374 7 577 3.18E-153 T 14-10-2018 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 Pfam PF02310 B12 binding domain 90 200 5.8E-29 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 TIGRFAM TIGR02370 pyl_corrinoid: methyltransferase cognate corrinoid proteins, Methanosarcina family 7 200 7.0E-65 T 14-10-2018 IPR012741 Methyltransferase cognate corrinoid protein GO:0015948|GO:0031419|GO:0050897 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 SUPERFAMILY SSF52242 69 210 1.14E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 Gene3D G3DSA:1.10.1240.10 3 80 5.4E-27 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 Gene3D G3DSA:3.40.50.280 81 212 1.0E-49 T 14-10-2018 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 SUPERFAMILY SSF47644 3 83 2.62E-22 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 Pfam PF02607 B12 binding domain 6 76 3.6E-19 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27760 c7b053f45b4a2f9f20bbf480f2891bea 212 SMART SM01018 1 84 1.9E-32 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20780 d8dba294c8715df320d8ddae178e9177 149 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 4 124 2.0E-28 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tph_c20780 d8dba294c8715df320d8ddae178e9177 149 Gene3D G3DSA:3.40.50.1100 1 96 9.4E-52 T 14-10-2018 Tph_c20780 d8dba294c8715df320d8ddae178e9177 149 SUPERFAMILY SSF53686 1 124 5.63E-42 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c20780 d8dba294c8715df320d8ddae178e9177 149 Gene3D G3DSA:3.40.50.1100 97 124 9.4E-52 T 14-10-2018 Tph_c24830 457d8e60f37cb9a957520a67e75c322c 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 33 321 5.2E-27 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tph_c24830 457d8e60f37cb9a957520a67e75c322c 331 Gene3D G3DSA:2.40.30.170 35 324 5.6E-50 T 14-10-2018 Tph_c24830 457d8e60f37cb9a957520a67e75c322c 331 Gene3D G3DSA:2.40.50.100 44 242 5.6E-50 T 14-10-2018 Tph_c24830 457d8e60f37cb9a957520a67e75c322c 331 Gene3D G3DSA:1.10.287.470 78 207 5.6E-50 T 14-10-2018 Tph_c24830 457d8e60f37cb9a957520a67e75c322c 331 SUPERFAMILY SSF111369 37 325 2.09E-15 T 14-10-2018 Tph_c07090 0a5f73c942dc62d23ae186cca283a505 144 SMART SM00530 9 65 3.7E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c07090 0a5f73c942dc62d23ae186cca283a505 144 SUPERFAMILY SSF47413 5 67 2.82E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c07090 0a5f73c942dc62d23ae186cca283a505 144 Gene3D G3DSA:1.10.260.40 6 137 2.4E-16 T 14-10-2018 Tph_c07090 0a5f73c942dc62d23ae186cca283a505 144 Pfam PF13560 Helix-turn-helix domain 6 62 6.3E-13 T 14-10-2018 Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 Gene3D G3DSA:3.40.1280.10 1 172 6.5E-71 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 PIRSF PIRSF000386 1 242 1.2E-100 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 3 224 3.7E-94 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 SUPERFAMILY SSF75217 2 238 8.72E-98 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 248 106.662 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 218 2.7E-65 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tph_c10260 d2ba7427ccd7984d64e4aecfafaa821f 248 Gene3D G3DSA:1.10.1270.20 173 242 5.0E-28 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Tph_c14800 f128c81e20f6b0cf8a346d6ad7ba9d23 461 Gene3D G3DSA:3.30.950.30 11 163 8.2E-11 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily Tph_c14800 f128c81e20f6b0cf8a346d6ad7ba9d23 461 Pfam PF04326 Putative DNA-binding domain 25 154 6.2E-8 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 Gene3D G3DSA:2.30.42.10 111 199 5.5E-93 T 14-10-2018 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 Gene3D G3DSA:3.30.750.44 61 351 5.5E-93 T 14-10-2018 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 SMART SM00245 185 376 9.8E-58 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 Gene3D G3DSA:3.90.226.10 200 373 5.5E-93 T 14-10-2018 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 SUPERFAMILY SSF50156 82 211 2.1E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 Pfam PF03572 Peptidase family S41 213 374 6.5E-50 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 69 383 4.8E-99 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 SUPERFAMILY SSF52096 53 382 2.32E-68 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 Pfam PF13180 PDZ domain 111 189 2.3E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c06580 97761ead4f7f2d07e2314b7e0da76b5c 405 SMART SM00228 111 183 2.9E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 Gene3D G3DSA:1.10.10.10 2 141 7.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 Pfam PF01047 MarR family 34 91 2.1E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 SUPERFAMILY SSF46785 10 142 1.1E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 SMART SM00347 27 127 6.9E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 5.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c04460 40c86a38395d722b3929a545ac3b9652 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c09170 8cae5d10979cf2305a7e03717f94cb2d 660 Pfam PF00723 Glycosyl hydrolases family 15 427 644 1.1E-11 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Tph_c09170 8cae5d10979cf2305a7e03717f94cb2d 660 Gene3D G3DSA:1.50.10.10 255 657 1.2E-88 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tph_c09170 8cae5d10979cf2305a7e03717f94cb2d 660 SUPERFAMILY SSF48208 237 654 9.53E-101 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 Pfam PF01668 SmpB protein 9 150 2.5E-66 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 Gene3D G3DSA:2.40.280.10 2 129 4.2E-56 T 14-10-2018 IPR023620 Small protein B Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 SUPERFAMILY SSF74982 3 132 3.53E-56 T 14-10-2018 IPR023620 Small protein B Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 79.989 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 3.9E-62 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tph_c07150 98a19d6a17881898a2afeb744f375c59 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 2.0E-48 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 Gene3D G3DSA:1.10.599.10 245 562 2.4E-68 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 231 564 4.7E-65 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 SUPERFAMILY SSF56228 3 206 3.79E-50 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 Gene3D G3DSA:3.60.9.10 1 209 7.4E-60 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 Gene3D G3DSA:1.10.569.10 247 424 2.4E-68 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 SUPERFAMILY SSF48310 220 569 2.35E-83 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 5 205 2.8E-58 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c07080 7472745382c38ed5ec335bb2ff940ae7 583 SMART SM00790 1 207 8.9E-74 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 Gene3D G3DSA:1.10.3210.10 145 300 2.7E-13 T 14-10-2018 Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 SUPERFAMILY SSF50249 6 96 3.0E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 SUPERFAMILY SSF109604 150 284 2.32E-15 T 14-10-2018 Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 SMART SM00471 158 294 1.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 Pfam PF01336 OB-fold nucleic acid binding domain 25 87 1.1E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 Gene3D G3DSA:2.40.50.140 6 106 1.8E-6 T 14-10-2018 Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 TIGRFAM TIGR00277 HDIG: HDIG domain 158 232 3.2E-9 T 14-10-2018 IPR006675 HDIG domain Tph_c01900 f34e605699b6ce9272e74a1933a31549 319 Pfam PF01966 HD domain 163 284 1.3E-10 T 14-10-2018 IPR006674 HD domain Tph_c07300 b5b6bacd9bd6162a2c0ad102cfaecc6a 270 Pfam PF08666 SAF domain 40 98 6.7E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Tph_c07300 b5b6bacd9bd6162a2c0ad102cfaecc6a 270 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 35 249 3.5E-22 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB Tph_c07300 b5b6bacd9bd6162a2c0ad102cfaecc6a 270 SMART SM00858 37 99 2.1E-8 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Tph_c07300 b5b6bacd9bd6162a2c0ad102cfaecc6a 270 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 112 218 2.1E-13 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Tph_c16700 8d139079d09fa67e2abd97990599674e 301 SUPERFAMILY SSF53223 5 108 3.17E-34 T 14-10-2018 Tph_c16700 8d139079d09fa67e2abd97990599674e 301 SUPERFAMILY SSF51735 109 284 3.58E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c16700 8d139079d09fa67e2abd97990599674e 301 Gene3D G3DSA:3.40.50.10860 12 273 1.2E-96 T 14-10-2018 Tph_c16700 8d139079d09fa67e2abd97990599674e 301 Gene3D G3DSA:3.40.50.720 108 252 1.2E-96 T 14-10-2018 Tph_c16700 8d139079d09fa67e2abd97990599674e 301 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 124 203 2.9E-6 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Tph_c16700 8d139079d09fa67e2abd97990599674e 301 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 14 96 4.1E-28 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tph_c16700 8d139079d09fa67e2abd97990599674e 301 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 9 284 35.657 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tph_c16700 8d139079d09fa67e2abd97990599674e 301 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 10 286 5.1E-81 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 Pfam PF02901 Pyruvate formate lyase-like 20 608 9.7E-188 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 ProSitePatterns PS00850 Glycine radical domain signature. 719 727 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 12 745 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 Gene3D G3DSA:3.20.70.20 4 747 7.0E-286 T 14-10-2018 Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 Pfam PF01228 Glycine radical 624 730 2.2E-43 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 PIRSF PIRSF000379 6 748 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 Tph_c09600 c90e272d908ebeadc90f083137235ee7 751 SUPERFAMILY SSF51998 7 747 2.7E-270 T 14-10-2018 Tph_c15820 b62848f4d4b655bd118f9992bf168b16 315 SUPERFAMILY SSF53807 59 312 7.06E-69 T 14-10-2018 Tph_c15820 b62848f4d4b655bd118f9992bf168b16 315 Gene3D G3DSA:3.40.50.1980 60 176 3.4E-36 T 14-10-2018 Tph_c15820 b62848f4d4b655bd118f9992bf168b16 315 Pfam PF01497 Periplasmic binding protein 63 284 1.0E-38 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tph_c15820 b62848f4d4b655bd118f9992bf168b16 315 Gene3D G3DSA:3.40.50.1980 178 311 2.2E-39 T 14-10-2018 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 2 422 46.969 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 Gene3D G3DSA:3.40.50.720 191 350 2.9E-169 T 14-10-2018 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 SUPERFAMILY SSF51735 189 351 3.73E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 15 140 4.9E-26 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 PIRSF PIRSF001109 3 422 4.0E-177 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 SUPERFAMILY SSF52283 9 422 1.7E-92 T 14-10-2018 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 SMART SM00996 6 421 1.7E-124 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 211 228 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 Gene3D G3DSA:3.40.50.1480 13 411 2.9E-169 T 14-10-2018 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 11 422 9.5E-186 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 SMART SM00997 189 350 1.4E-100 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 143 417 3.5E-28 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c08390 e82d7f1f353e140fd3355c9438033df3 422 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 189 349 7.4E-51 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Tph_c02940 b5f2453fc0b9426753e15841b61d21a8 119 Pfam PF01934 Protein of unknown function DUF86 15 88 1.1E-13 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Tph_c02940 b5f2453fc0b9426753e15841b61d21a8 119 Gene3D G3DSA:1.20.120.580 1 93 9.2E-20 T 14-10-2018 IPR037038 Bsu32300-like superfamily Tph_c07130 82ba8927abe3dae0ce5a189e10d5fd39 228 Pfam PF01259 SAICAR synthetase 4 215 7.0E-28 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Tph_c07130 82ba8927abe3dae0ce5a189e10d5fd39 228 Gene3D G3DSA:3.30.470.20 99 224 5.3E-32 T 14-10-2018 Tph_c07130 82ba8927abe3dae0ce5a189e10d5fd39 228 Gene3D G3DSA:3.30.200.20 1 98 8.8E-23 T 14-10-2018 Tph_c07130 82ba8927abe3dae0ce5a189e10d5fd39 228 SUPERFAMILY SSF56104 2 219 4.58E-49 T 14-10-2018 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 SUPERFAMILY SSF55826 220 386 4.32E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Gene3D G3DSA:3.90.960.10 240 387 8.7E-251 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 456 6.6E-52 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Gene3D G3DSA:3.40.50.800 4 551 8.7E-251 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 SUPERFAMILY SSF52954 462 569 9.98E-29 T 14-10-2018 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 PIRSF PIRSF001535 1 571 1.0E-256 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 568 41.037 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.1E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.1E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.1E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Pfam PF03129 Anticodon binding domain 474 565 2.4E-20 T 14-10-2018 IPR004154 Anticodon-binding Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 SUPERFAMILY SSF55681 9 475 6.37E-101 T 14-10-2018 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 1.7E-214 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Gene3D G3DSA:3.30.930.10 11 463 8.7E-251 T 14-10-2018 Tph_c11260 46795be0d730c07cd6d043b4e8541d3b 576 Pfam PF04073 Aminoacyl-tRNA editing domain 256 377 2.6E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Tph_c05320 1999d0e5f2fc65763c3889379615e139 365 Pfam PF01950 Fructose-1,6-bisphosphatase 4 360 8.6E-188 T 14-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tph_c05320 1999d0e5f2fc65763c3889379615e139 365 SUPERFAMILY SSF111249 4 361 4.58E-174 T 14-10-2018 IPR036076 Fructose-1,6-bisphosphatase, class V superfamily KEGG: 00010+3.1.3.11+4.1.2.13|KEGG: 00030+3.1.3.11+4.1.2.13|KEGG: 00051+3.1.3.11+4.1.2.13|KEGG: 00680+3.1.3.11+4.1.2.13|KEGG: 00710+3.1.3.11+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tph_c05320 1999d0e5f2fc65763c3889379615e139 365 Hamap MF_02067 Fructose-1,6-bisphosphate aldolase/phosphatase [fbp]. 3 361 59.836 T 14-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tph_c05320 1999d0e5f2fc65763c3889379615e139 365 ProDom PD014260 DIHYDROOROTATE DEHYDROGENASE THERMOPHILE-SPECIFIC TA1428 ST0318 BLL2851 16-BISPHOSPHATASE APE1109 PF0613 MJ0299 4 361 2.0E-168 T 14-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tph_c05320 1999d0e5f2fc65763c3889379615e139 365 PIRSF PIRSF015647 3 365 1.7E-180 T 14-10-2018 IPR002803 Fructose-1,6-bisphosphatase, class V KEGG: 00010+4.1.2.13+3.1.3.11|KEGG: 00030+4.1.2.13+3.1.3.11|KEGG: 00051+4.1.2.13+3.1.3.11|KEGG: 00680+4.1.2.13+3.1.3.11|KEGG: 00710+4.1.2.13+3.1.3.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tph_c28470 42ec7959949c95389cdef5d9d1657b70 100 Pfam PF02575 YbaB/EbfC DNA-binding family 18 93 5.8E-14 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tph_c28470 42ec7959949c95389cdef5d9d1657b70 100 SUPERFAMILY SSF82607 18 93 1.44E-12 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tph_c28470 42ec7959949c95389cdef5d9d1657b70 100 Gene3D G3DSA:3.30.1310.10 10 99 5.4E-13 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tph_c03790 1cd2b17a1f75fd996c8625368532443b 522 SUPERFAMILY SSF51905 46 518 1.87E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c03790 1cd2b17a1f75fd996c8625368532443b 522 Pfam PF00890 FAD binding domain 49 500 1.1E-68 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c03790 1cd2b17a1f75fd996c8625368532443b 522 Gene3D G3DSA:3.90.700.10 315 451 3.2E-125 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c03790 1cd2b17a1f75fd996c8625368532443b 522 SUPERFAMILY SSF56425 315 460 8.89E-30 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c03790 1cd2b17a1f75fd996c8625368532443b 522 Gene3D G3DSA:3.50.50.60 47 510 3.2E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c25100 39688b3841340d7f5f8752c254628f73 658 Gene3D G3DSA:3.30.457.10 55 133 6.2E-18 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c25100 39688b3841340d7f5f8752c254628f73 658 Pfam PF07833 Copper amine oxidase N-terminal domain 51 139 1.4E-27 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c25100 39688b3841340d7f5f8752c254628f73 658 Gene3D G3DSA:3.10.105.10 397 624 2.2E-35 T 14-10-2018 Tph_c25100 39688b3841340d7f5f8752c254628f73 658 SUPERFAMILY SSF53850 151 653 2.26E-96 T 14-10-2018 Tph_c25100 39688b3841340d7f5f8752c254628f73 658 PIRSF PIRSF002741 144 653 2.0E-65 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c25100 39688b3841340d7f5f8752c254628f73 658 Gene3D G3DSA:3.40.190.10 135 391 1.9E-56 T 14-10-2018 Tph_c25100 39688b3841340d7f5f8752c254628f73 658 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 193 558 2.5E-72 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c25100 39688b3841340d7f5f8752c254628f73 658 SUPERFAMILY SSF55383 54 138 1.57E-25 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c03420 3a11ece9548f8fa3ededcffd165dbc19 342 SUPERFAMILY SSF81345 7 337 2.88E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c03420 3a11ece9548f8fa3ededcffd165dbc19 342 Pfam PF01032 FecCD transport family 23 337 1.7E-86 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tph_c03420 3a11ece9548f8fa3ededcffd165dbc19 342 Gene3D G3DSA:1.10.3470.10 8 341 3.5E-96 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c05430 6810041100e38245e964bbe704961fbc 163 SUPERFAMILY SSF53448 28 94 5.53E-10 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c05430 6810041100e38245e964bbe704961fbc 163 Pfam PF00535 Glycosyl transferase family 2 38 90 5.2E-5 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tph_c05430 6810041100e38245e964bbe704961fbc 163 Gene3D G3DSA:3.90.550.10 30 121 8.7E-11 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 Pfam PF00877 NlpC/P60 family 173 276 4.7E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 Gene3D G3DSA:3.90.1720.10 150 278 1.2E-42 T 14-10-2018 Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 Gene3D G3DSA:3.10.350.10 30 76 9.7E-19 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 Pfam PF01476 LysM domain 100 142 3.4E-16 T 14-10-2018 IPR018392 LysM domain Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 Pfam PF01476 LysM domain 33 75 2.1E-16 T 14-10-2018 IPR018392 LysM domain Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 Gene3D G3DSA:3.10.350.10 96 146 3.0E-20 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 SUPERFAMILY SSF54001 154 277 8.67E-43 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 SUPERFAMILY SSF54106 99 142 5.89E-13 T 14-10-2018 Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 SMART SM00257 99 142 2.2E-16 T 14-10-2018 IPR018392 LysM domain Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 SMART SM00257 32 75 1.6E-15 T 14-10-2018 IPR018392 LysM domain Tph_c11650 d16c1626f6bda25adc46c7d2a1d67fda 278 SUPERFAMILY SSF54106 32 75 5.23E-12 T 14-10-2018 Tph_c27850 dc21132d983fd8adf1595727162979df 397 SUPERFAMILY SSF50621 241 377 2.23E-23 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tph_c27850 dc21132d983fd8adf1595727162979df 397 TIGRFAM TIGR00492 alr: alanine racemase 10 315 2.9E-77 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 Pfam PF00842 Alanine racemase, C-terminal domain 249 363 5.8E-19 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 Gene3D G3DSA:3.20.20.10 16 225 8.2E-72 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c27850 dc21132d983fd8adf1595727162979df 397 SUPERFAMILY SSF51419 14 235 5.63E-65 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c27850 dc21132d983fd8adf1595727162979df 397 Hamap MF_01201 Alanine racemase. 7 395 26.664 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 SMART SM01005 246 377 1.9E-22 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 Pfam PF01168 Alanine racemase, N-terminal domain 14 233 7.4E-69 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 69 87 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 164 175 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 279 294 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 33 49 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 130 142 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 206 233 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 PRINTS PR00992 Alanine racemase signature 262 277 1.0E-42 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c27850 dc21132d983fd8adf1595727162979df 397 Gene3D G3DSA:2.40.37.10 226 380 4.4E-28 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tph_c15840 d22827434614e6076df762c8ffa7b9c5 284 Gene3D G3DSA:1.10.287.950 78 284 4.1E-39 T 14-10-2018 Tph_c15840 d22827434614e6076df762c8ffa7b9c5 284 SUPERFAMILY SSF58104 101 277 3.53E-43 T 14-10-2018 Tph_c15840 d22827434614e6076df762c8ffa7b9c5 284 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 156 280 2.5E-27 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c15840 d22827434614e6076df762c8ffa7b9c5 284 SMART SM00283 102 281 5.9E-5 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c15840 d22827434614e6076df762c8ffa7b9c5 284 Gene3D G3DSA:3.40.50.720 1 77 4.3E-9 T 14-10-2018 Tph_c15840 d22827434614e6076df762c8ffa7b9c5 284 SUPERFAMILY SSF51735 1 101 5.22E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c10560 dea475ac3fa26e5c8450d2d6d9ef5750 324 SMART SM00382 37 201 0.0013 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10560 dea475ac3fa26e5c8450d2d6d9ef5750 324 SUPERFAMILY SSF52540 8 216 4.57E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10560 dea475ac3fa26e5c8450d2d6d9ef5750 324 TIGRFAM TIGR02640 gas_vesic_GvpN: gas vesicle protein GvpN 18 276 1.1E-98 T 14-10-2018 IPR013462 Gas vesicle protein GvpN GO:0000166|GO:0005524|GO:0031411|GO:0031412 Tph_c10560 dea475ac3fa26e5c8450d2d6d9ef5750 324 Gene3D G3DSA:3.40.50.300 24 211 1.0E-30 T 14-10-2018 Tph_c10560 dea475ac3fa26e5c8450d2d6d9ef5750 324 Pfam PF07728 AAA domain (dynein-related subfamily) 42 194 3.7E-16 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 SUPERFAMILY SSF57716 11 46 2.57E-11 T 14-10-2018 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 SMART SM00994 10 49 3.0E-23 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Pfam PF06689 ClpX C4-type zinc finger 12 48 6.3E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 1.6E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 SUPERFAMILY SSF52540 59 398 3.19E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Gene3D G3DSA:3.40.50.300 54 309 7.8E-110 T 14-10-2018 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 387 7.5E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Gene3D G3DSA:3.30.50.30 3 50 4.8E-22 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 SMART SM00382 108 261 3.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Gene3D G3DSA:1.10.8.60 310 418 4.8E-40 T 14-10-2018 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 SMART SM01086 311 406 2.3E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.444 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Tph_c04650 7f00a801f62d9e77981489240b6e46fb 419 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 405 7.6E-206 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Tph_c03550 be412f7cd43288b0f59033bc9a0b099c 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 292 2.3E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c03550 be412f7cd43288b0f59033bc9a0b099c 332 SMART SM00382 33 239 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03550 be412f7cd43288b0f59033bc9a0b099c 332 SUPERFAMILY SSF52540 4 252 9.84E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03550 be412f7cd43288b0f59033bc9a0b099c 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 310 2.3E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c03550 be412f7cd43288b0f59033bc9a0b099c 332 Pfam PF00005 ABC transporter 25 181 3.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c03550 be412f7cd43288b0f59033bc9a0b099c 332 Gene3D G3DSA:3.40.50.300 1 325 2.5E-92 T 14-10-2018 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 Gene3D G3DSA:3.40.1190.10 1 298 2.6E-104 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 Pfam PF08245 Mur ligase middle domain 44 271 1.1E-18 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 42 65 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 SUPERFAMILY SSF53244 297 429 4.03E-30 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 375 5.1E-10 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 428 9.0E-116 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 SUPERFAMILY SSF53623 1 297 5.27E-94 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 Gene3D G3DSA:3.90.190.20 300 432 2.5E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 140 155 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Tph_c05920 051ee9914453395ce4d081a7cebab6f0 441 PIRSF PIRSF001563 1 433 3.8E-141 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 27 43 1.0E-28 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 10 27 1.0E-28 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 43 59 1.0E-28 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 59 75 1.0E-28 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 SUPERFAMILY SSF51219 9 73 3.66E-33 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 Gene3D G3DSA:2.60.40.50 2 75 4.4E-38 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Tph_c09350 da6e79f85a480ab2af63db40d31c91d7 75 Pfam PF02081 Tryptophan RNA-binding attenuator protein 7 73 1.3E-40 T 14-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 SUPERFAMILY SSF52922 228 287 1.05E-6 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 371 514 4.2E-22 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 Gene3D G3DSA:3.30.70.20 529 584 7.9E-7 T 14-10-2018 Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 Gene3D G3DSA:3.40.50.970 360 521 9.7E-15 T 14-10-2018 Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 PIRSF PIRSF006439 1 589 1.4E-203 T 14-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 Gene3D G3DSA:3.40.50.970 1 183 3.8E-55 T 14-10-2018 Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 SUPERFAMILY SSF52518 4 199 6.31E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 SUPERFAMILY SSF52518 342 552 1.05E-23 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c04800 0f6a6c5b69e4b09e7d73bc082166ca9e 589 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 189 2.9E-13 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tph_c02430 feb714188543901738e60c4647389300 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 1.8E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c02430 feb714188543901738e60c4647389300 231 Pfam PF00072 Response regulator receiver domain 3 111 2.9E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c02430 feb714188543901738e60c4647389300 231 SMART SM00448 1 111 9.6E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c02430 feb714188543901738e60c4647389300 231 SMART SM00862 150 226 4.2E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c02430 feb714188543901738e60c4647389300 231 SUPERFAMILY SSF46894 126 227 1.96E-33 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c02430 feb714188543901738e60c4647389300 231 Gene3D G3DSA:3.40.50.2300 1 126 1.1E-41 T 14-10-2018 Tph_c02430 feb714188543901738e60c4647389300 231 SUPERFAMILY SSF52172 1 122 3.98E-45 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c02430 feb714188543901738e60c4647389300 231 Gene3D G3DSA:1.10.10.10 127 231 4.5E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 Gene3D G3DSA:3.40.50.150 63 303 1.2E-58 T 14-10-2018 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 85 90 - T 14-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 Pfam PF01555 DNA methylase 81 294 2.4E-40 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 254 272 9.9E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 277 297 9.9E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 112 132 9.9E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 80 94 9.9E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 235 252 9.9E-29 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c06100 c686127197cae82dfc9ffd14b8531576 306 SUPERFAMILY SSF53335 60 297 8.99E-56 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 SUPERFAMILY SSF47644 5 82 2.35E-18 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 Pfam PF02607 B12 binding domain 7 77 1.7E-13 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 SUPERFAMILY SSF52242 69 207 3.14E-39 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 SMART SM01018 2 84 4.4E-20 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 Gene3D G3DSA:3.40.50.280 80 208 4.3E-40 T 14-10-2018 Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 Gene3D G3DSA:1.10.1240.10 3 79 7.8E-23 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c09120 5e12e5a3591c5a3286599fcb13da2781 210 Pfam PF02310 B12 binding domain 90 199 6.1E-20 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 PRINTS PR00050 Cold shock protein signature 23 32 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 PRINTS PR00050 Cold shock protein signature 38 56 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 PRINTS PR00050 Cold shock protein signature 3 18 1.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 Pfam PF00313 'Cold-shock' DNA-binding domain 2 64 8.4E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 SUPERFAMILY SSF50249 2 64 2.18E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c06450 7814977b875a51ff09a14922c510ba29 65 PIRSF PIRSF002599 1 65 2.2E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 Gene3D G3DSA:2.40.50.140 1 64 3.0E-30 T 14-10-2018 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 SMART SM00357 2 65 2.0E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tph_c06450 7814977b875a51ff09a14922c510ba29 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 14-10-2018 IPR019844 Cold-shock conserved site Tph_c00690 17392fdb5c4524107a2f590d1e3f2e76 65 PIRSF PIRSF037263 1 63 1.4E-29 T 14-10-2018 IPR009296 Protein of unknown function DUF951 Tph_c00690 17392fdb5c4524107a2f590d1e3f2e76 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 3 56 1.9E-30 T 14-10-2018 IPR009296 Protein of unknown function DUF951 Tph_c27650 9459cd1467d8c8d2b55db1a3171b01b3 525 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 11 499 3.6E-161 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Tph_c27650 9459cd1467d8c8d2b55db1a3171b01b3 525 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 49 499 2.4E-142 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Tph_c27650 9459cd1467d8c8d2b55db1a3171b01b3 525 ProSitePatterns PS01303 BCCT family of transporters signature. 313 322 - T 14-10-2018 IPR018093 BCCT transporter, conserved site Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 SUPERFAMILY SSF55021 248 343 2.75E-23 T 14-10-2018 Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 SMART SM00930 265 340 4.0E-29 T 14-10-2018 IPR018449 NIL domain Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 Pfam PF09383 NIL domain 268 339 1.3E-23 T 14-10-2018 IPR018449 NIL domain Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 Gene3D G3DSA:3.30.70.260 261 342 1.1E-22 T 14-10-2018 Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 SUPERFAMILY SSF52540 1 240 4.64E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 Gene3D G3DSA:3.40.50.300 1 260 2.1E-85 T 14-10-2018 Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 Pfam PF00005 ABC transporter 21 169 3.0E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c22640 a7bf0f37cf541606d1eec32c4d38a0a8 343 SMART SM00382 30 226 5.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c19550 10bd260e910e20d5401609cc0afcc823 142 Pfam PF01597 Glycine cleavage H-protein 11 129 1.1E-37 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Tph_c19550 10bd260e910e20d5401609cc0afcc823 142 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 51 80 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tph_c19550 10bd260e910e20d5401609cc0afcc823 142 SUPERFAMILY SSF51230 7 129 5.14E-36 T 14-10-2018 IPR011053 Single hybrid motif Tph_c19550 10bd260e910e20d5401609cc0afcc823 142 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 7 130 1.5E-35 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Tph_c19550 10bd260e910e20d5401609cc0afcc823 142 Gene3D G3DSA:2.40.50.100 6 134 2.0E-41 T 14-10-2018 Tph_c19550 10bd260e910e20d5401609cc0afcc823 142 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 8 129 30.156 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 SMART SM00260 166 309 7.0E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 SMART SM00260 3 138 3.4E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 SMART SM00260 335 475 2.8E-39 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Gene3D G3DSA:2.30.30.40 341 469 1.3E-39 T 14-10-2018 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 SUPERFAMILY SSF50341 4 141 6.41E-32 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Gene3D G3DSA:2.40.50.180 26 92 4.8E-35 T 14-10-2018 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Gene3D G3DSA:2.40.50.180 189 304 8.1E-30 T 14-10-2018 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 SUPERFAMILY SSF50341 165 313 3.92E-31 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Gene3D G3DSA:2.30.30.40 172 303 8.1E-30 T 14-10-2018 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Pfam PF01584 CheW-like domain 339 478 1.2E-35 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Pfam PF01584 CheW-like domain 170 311 7.5E-30 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Pfam PF01584 CheW-like domain 7 140 1.0E-32 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Gene3D G3DSA:2.30.30.40 9 132 4.8E-35 T 14-10-2018 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 SUPERFAMILY SSF50341 331 480 1.57E-36 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Tph_c05040 1af3531fffe5e103e3ecef5ceb3ea256 531 Gene3D G3DSA:2.40.50.180 358 470 1.3E-39 T 14-10-2018 Tph_c02630 121046f1acc6e15364a73512d1c7a218 828 Gene3D G3DSA:1.25.40.10 579 821 2.2E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c02630 121046f1acc6e15364a73512d1c7a218 828 SUPERFAMILY SSF48452 591 814 5.31E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c02630 121046f1acc6e15364a73512d1c7a218 828 Pfam PF04932 O-Antigen ligase 221 439 7.9E-20 T 14-10-2018 IPR007016 O-antigen ligase-related Tph_c27730 556f8ff11197b44272582dd1a2bb4943 453 SUPERFAMILY SSF53383 13 446 1.16E-125 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c27730 556f8ff11197b44272582dd1a2bb4943 453 Gene3D G3DSA:3.40.640.10 70 344 3.2E-161 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c27730 556f8ff11197b44272582dd1a2bb4943 453 Pfam PF00202 Aminotransferase class-III 39 444 2.4E-103 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c27730 556f8ff11197b44272582dd1a2bb4943 453 PIRSF PIRSF000521 37 447 2.1E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c27730 556f8ff11197b44272582dd1a2bb4943 453 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c27730 556f8ff11197b44272582dd1a2bb4943 453 Gene3D G3DSA:3.90.1150.10 16 444 3.2E-161 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c02530 ede6469fef7497707e653955844d473b 1627 Pfam PF00270 DEAD/DEAH box helicase 93 295 7.8E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tph_c02530 ede6469fef7497707e653955844d473b 1627 SUPERFAMILY SSF52540 106 1137 7.89E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c02530 ede6469fef7497707e653955844d473b 1627 SUPERFAMILY SSF52540 90 299 8.6E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c02530 ede6469fef7497707e653955844d473b 1627 Gene3D G3DSA:3.40.50.300 87 310 1.5E-42 T 14-10-2018 Tph_c02530 ede6469fef7497707e653955844d473b 1627 Pfam PF09369 Domain of unknown function (DUF1998) 1510 1594 6.0E-10 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative Tph_c02530 ede6469fef7497707e653955844d473b 1627 Gene3D G3DSA:3.40.50.300 992 1129 1.3E-16 T 14-10-2018 Tph_c02530 ede6469fef7497707e653955844d473b 1627 SMART SM00490 995 1078 5.3E-11 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c02530 ede6469fef7497707e653955844d473b 1627 Pfam PF00271 Helicase conserved C-terminal domain 1014 1076 8.0E-10 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c02530 ede6469fef7497707e653955844d473b 1627 SMART SM00487 86 328 2.2E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c16220 9b60aad78813073d823337c5ebaae705 566 SUPERFAMILY SSF52540 2 516 6.82E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16220 9b60aad78813073d823337c5ebaae705 566 PIRSF PIRSF003128 1 560 7.4E-166 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Tph_c16220 9b60aad78813073d823337c5ebaae705 566 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 4.9E-15 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tph_c16220 9b60aad78813073d823337c5ebaae705 566 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 556 1.9E-164 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Tph_c16220 9b60aad78813073d823337c5ebaae705 566 Gene3D G3DSA:3.40.50.300 1 266 9.9E-46 T 14-10-2018 Tph_c16220 9b60aad78813073d823337c5ebaae705 566 Gene3D G3DSA:3.40.50.300 267 557 6.0E-59 T 14-10-2018 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 SUPERFAMILY SSF46589 30 116 5.23E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 38 104 3.5E-20 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 56 356 4.5E-105 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 SUPERFAMILY SSF55681 109 357 8.14E-82 T 14-10-2018 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 Pfam PF01409 tRNA synthetases class II core domain (F) 109 356 2.1E-105 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 25 356 49.012 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Tph_c13350 7a483c2439badc39cf8390729e1401a0 361 Gene3D G3DSA:3.30.930.10 24 358 8.6E-122 T 14-10-2018 Tph_c04730 27b0cb0f87602e8d6fd64f987522d97d 428 Gene3D G3DSA:1.20.1250.20 2 418 9.2E-72 T 14-10-2018 Tph_c04730 27b0cb0f87602e8d6fd64f987522d97d 428 SUPERFAMILY SSF103473 9 415 3.14E-70 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c04730 27b0cb0f87602e8d6fd64f987522d97d 428 PIRSF PIRSF002808 2 427 1.5E-39 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 Tph_c04730 27b0cb0f87602e8d6fd64f987522d97d 428 Pfam PF07690 Major Facilitator Superfamily 23 374 8.6E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c19410 39c2aa5b8a6d4aa85e71e8f40562d470 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 111 7.2E-30 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c19410 39c2aa5b8a6d4aa85e71e8f40562d470 117 PIRSF PIRSF033490 2 113 1.2E-37 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c19410 39c2aa5b8a6d4aa85e71e8f40562d470 117 Gene3D G3DSA:2.30.30.110 3 117 5.4E-43 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Tph_c19410 39c2aa5b8a6d4aa85e71e8f40562d470 117 SUPERFAMILY SSF50118 3 113 2.94E-37 T 14-10-2018 Tph_c14130 c1ff71fd3fa9b6555601f4eaf4fce9af 178 Pfam PF00535 Glycosyl transferase family 2 5 48 2.1E-6 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tph_c14130 c1ff71fd3fa9b6555601f4eaf4fce9af 178 SUPERFAMILY SSF53448 50 133 7.45E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c14130 c1ff71fd3fa9b6555601f4eaf4fce9af 178 SUPERFAMILY SSF53448 3 48 6.41E-7 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c14130 c1ff71fd3fa9b6555601f4eaf4fce9af 178 Gene3D G3DSA:3.90.550.10 2 50 5.3E-9 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c14130 c1ff71fd3fa9b6555601f4eaf4fce9af 178 Gene3D G3DSA:3.90.550.10 51 164 2.4E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c06970 f500abbbe616754ef506c52e17bdb897 503 TIGRFAM TIGR02518 EutH_ACDH: acetaldehyde dehydrogenase (acetylating) 4 461 3.7E-194 T 14-10-2018 IPR013357 Acetaldehyde dehydrogenase, acetylating Tph_c06970 f500abbbe616754ef506c52e17bdb897 503 Pfam PF00171 Aldehyde dehydrogenase family 9 273 1.1E-24 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tph_c06970 f500abbbe616754ef506c52e17bdb897 503 Gene3D G3DSA:3.40.309.10 222 405 1.6E-179 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Tph_c06970 f500abbbe616754ef506c52e17bdb897 503 Gene3D G3DSA:3.40.605.10 14 443 1.6E-179 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Tph_c06970 f500abbbe616754ef506c52e17bdb897 503 SUPERFAMILY SSF53720 10 448 3.27E-78 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 PRINTS PR00446 Hydrogen uptake protein signature 57 67 8.9E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 PRINTS PR00446 Hydrogen uptake protein signature 36 53 8.9E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 PRINTS PR00446 Hydrogen uptake protein signature 5 17 8.9E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 PRINTS PR00446 Hydrogen uptake protein signature 68 84 8.9E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 PRINTS PR00446 Hydrogen uptake protein signature 17 28 8.9E-13 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 SUPERFAMILY SSF53163 4 151 3.53E-37 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 Gene3D G3DSA:3.40.50.1450 4 154 1.2E-42 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 Pfam PF01750 Hydrogenase maturation protease 23 148 8.9E-21 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26900 c5da1cded8586733e61cfc180fe0a5ba 155 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 6 149 6.4E-36 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 PIRSF PIRSF000774 1 467 2.1E-155 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 PRINTS PR00045 Sigma-54 factor signature 440 458 1.2E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 PRINTS PR00045 Sigma-54 factor signature 381 392 1.2E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 PRINTS PR00045 Sigma-54 factor signature 365 377 1.2E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 PRINTS PR00045 Sigma-54 factor signature 175 192 1.2E-29 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 Pfam PF04552 Sigma-54, DNA binding domain 306 465 2.2E-62 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 445 452 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 Gene3D G3DSA:1.10.10.60 406 464 3.1E-24 T 14-10-2018 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 Pfam PF04963 Sigma-54 factor, core binding domain 102 290 3.8E-54 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 Gene3D G3DSA:1.10.10.1330 109 223 1.5E-28 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 51 1.7E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c06730 82cf00f4ee7f9ac7b82b36d9fdb87552 467 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 464 5.4E-132 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 328 8.5E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 SUPERFAMILY SSF111369 128 185 1.44E-5 T 14-10-2018 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 Gene3D G3DSA:2.40.420.20 46 395 2.8E-69 T 14-10-2018 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 200 409 5.6E-40 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 Gene3D G3DSA:2.40.30.170 48 337 2.8E-69 T 14-10-2018 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 SUPERFAMILY SSF111369 52 126 8.5E-9 T 14-10-2018 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 SUPERFAMILY SSF111369 194 303 5.1E-6 T 14-10-2018 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 Gene3D G3DSA:1.10.287.470 93 221 2.8E-69 T 14-10-2018 Tph_c20490 5e6c75657abf52f3d75f2147f3362c42 415 Gene3D G3DSA:2.40.50.100 59 256 2.8E-69 T 14-10-2018 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 ProSitePatterns PS00180 Glutamine synthetase signature 1. 54 72 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 SMART SM01230 107 355 2.8E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 Gene3D G3DSA:3.10.20.70 5 108 3.1E-41 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 20 100 9.6E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 149 442 2.3E-133 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 SUPERFAMILY SSF54368 8 106 8.5E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 Pfam PF00120 Glutamine synthetase, catalytic domain 108 441 4.4E-138 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 235 250 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 Gene3D G3DSA:3.30.590.10 110 445 2.8E-137 T 14-10-2018 Tph_c12990 1c9e4117369bf6b62b8ca6e8546b9a70 445 SUPERFAMILY SSF55931 108 442 1.08E-127 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 Gene3D G3DSA:3.40.1280.10 114 275 1.5E-52 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 Gene3D G3DSA:3.30.1330.30 7 106 9.1E-21 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 SMART SM00967 32 108 1.1E-13 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 SUPERFAMILY SSF55315 12 105 1.12E-20 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 SUPERFAMILY SSF75217 115 267 1.64E-41 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 Pfam PF00588 SpoU rRNA Methylase family 119 260 2.8E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tph_c13340 8bce7a92fa5f98dacff4a82c3bdd1420 277 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 32 104 4.6E-11 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tph_c26440 beb633c52afc7214f3744a838a53bd2d 680 SUPERFAMILY SSF51445 177 670 2.06E-116 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c26440 beb633c52afc7214f3744a838a53bd2d 680 Pfam PF02446 4-alpha-glucanotransferase 183 652 1.1E-101 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tph_c26440 beb633c52afc7214f3744a838a53bd2d 680 Gene3D G3DSA:3.20.20.80 176 673 6.3E-106 T 14-10-2018 Tph_c26440 beb633c52afc7214f3744a838a53bd2d 680 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 138 577 3.5E-85 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 Tph_c06660 2e95c8b2245c7f28ac3ee6246790f69d 292 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 6.5E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 Tph_c06660 2e95c8b2245c7f28ac3ee6246790f69d 292 Gene3D G3DSA:3.40.50.1000 5 264 1.3E-75 T 14-10-2018 IPR023214 HAD superfamily Tph_c06660 2e95c8b2245c7f28ac3ee6246790f69d 292 SUPERFAMILY SSF56784 3 269 3.33E-73 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c06660 2e95c8b2245c7f28ac3ee6246790f69d 292 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 264 8.8E-67 T 14-10-2018 Tph_c06660 2e95c8b2245c7f28ac3ee6246790f69d 292 Gene3D G3DSA:3.30.1240.10 85 193 1.3E-75 T 14-10-2018 Tph_c06660 2e95c8b2245c7f28ac3ee6246790f69d 292 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 237 1.4E-28 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Tph_c11510 8c617a0c04acb8f3300521b39e1df7e5 332 Pfam PF00294 pfkB family carbohydrate kinase 79 289 1.0E-7 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Tph_c11510 8c617a0c04acb8f3300521b39e1df7e5 332 Gene3D G3DSA:3.40.1190.20 59 329 2.0E-23 T 14-10-2018 IPR029056 Ribokinase-like Tph_c11510 8c617a0c04acb8f3300521b39e1df7e5 332 Gene3D G3DSA:1.10.10.10 1 58 5.9E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c11510 8c617a0c04acb8f3300521b39e1df7e5 332 SUPERFAMILY SSF46785 4 61 4.79E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c11510 8c617a0c04acb8f3300521b39e1df7e5 332 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 50 2.4E-10 T 14-10-2018 Tph_c11510 8c617a0c04acb8f3300521b39e1df7e5 332 SUPERFAMILY SSF53613 64 320 1.35E-22 T 14-10-2018 IPR029056 Ribokinase-like Tph_c14490 93b12474778dacbe084ded368923cb03 182 Gene3D G3DSA:3.40.50.2020 2 182 1.8E-64 T 14-10-2018 Tph_c14490 93b12474778dacbe084ded368923cb03 182 Pfam PF00156 Phosphoribosyl transferase domain 8 150 1.1E-26 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tph_c14490 93b12474778dacbe084ded368923cb03 182 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 6 179 39.385 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 Tph_c14490 93b12474778dacbe084ded368923cb03 182 SUPERFAMILY SSF53271 8 175 9.57E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c02350 9fbb9b71616b18005ef433f39a5d10f7 184 Pfam PF01966 HD domain 20 109 2.2E-12 T 14-10-2018 IPR006674 HD domain Tph_c02350 9fbb9b71616b18005ef433f39a5d10f7 184 TIGRFAM TIGR00277 HDIG: HDIG domain 17 91 1.8E-14 T 14-10-2018 IPR006675 HDIG domain Tph_c02350 9fbb9b71616b18005ef433f39a5d10f7 184 Gene3D G3DSA:1.10.3210.10 1 158 6.7E-18 T 14-10-2018 Tph_c02350 9fbb9b71616b18005ef433f39a5d10f7 184 SMART SM00471 15 123 1.5E-6 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c02350 9fbb9b71616b18005ef433f39a5d10f7 184 SUPERFAMILY SSF109604 9 174 1.28E-25 T 14-10-2018 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 SUPERFAMILY SSF54368 3 101 2.09E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 15 95 8.9E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 Pfam PF00120 Glutamine synthetase, catalytic domain 103 468 9.7E-135 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 470 1.6E-201 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 SMART SM01230 102 380 1.7E-155 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 Gene3D G3DSA:3.10.20.70 2 104 1.4E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 SUPERFAMILY SSF55931 103 470 9.81E-138 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 Gene3D G3DSA:3.30.590.10 105 459 4.2E-149 T 14-10-2018 Tph_c08620 cad46bf634395839f59d3ed5f1d0f84a 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Tph_c06880 35a3e6f698e1392e54400c9bbf53cde9 299 Pfam PF13276 HTH-like domain 63 107 3.7E-11 T 14-10-2018 IPR025948 HTH-like domain Tph_c06880 35a3e6f698e1392e54400c9bbf53cde9 299 SUPERFAMILY SSF53098 117 285 6.58E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c06880 35a3e6f698e1392e54400c9bbf53cde9 299 Gene3D G3DSA:3.30.420.10 119 279 6.9E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c06880 35a3e6f698e1392e54400c9bbf53cde9 299 Pfam PF00665 Integrase core domain 124 243 3.1E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c00760 45ad47ea1d390221b0408f0bb421df1a 147 Gene3D G3DSA:3.30.160.250 4 87 5.7E-27 T 14-10-2018 Tph_c00760 45ad47ea1d390221b0408f0bb421df1a 147 SUPERFAMILY SSF143100 3 65 6.02E-23 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like Tph_c00760 45ad47ea1d390221b0408f0bb421df1a 147 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 6 118 3.9E-19 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 SUPERFAMILY SSF48592 7 518 1.25E-78 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 SUPERFAMILY SSF52029 183 374 2.84E-81 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 SUPERFAMILY SSF54849 137 202 1.83E-26 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 Gene3D G3DSA:3.30.260.10 135 408 3.0E-232 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 Gene3D G3DSA:3.50.7.10 190 370 3.0E-232 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.0E-100 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 PRINTS PR00298 60kDa chaperonin signature 348 373 5.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 PRINTS PR00298 60kDa chaperonin signature 82 109 5.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 PRINTS PR00298 60kDa chaperonin signature 26 52 5.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 PRINTS PR00298 60kDa chaperonin signature 266 289 5.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 PRINTS PR00298 60kDa chaperonin signature 396 417 5.4E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 2.2E-256 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 Gene3D G3DSA:1.10.560.10 7 518 3.0E-232 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 Hamap MF_00600 60 kDa chaperonin [groL]. 1 535 41.211 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c08370 9e4230186c1dbfcb390830b1d0359063 535 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SMART SM01058 499 596 2.5E-49 T 14-10-2018 IPR003711 CarD-like/TRCF domain Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SUPERFAMILY SSF52540 802 1010 1.81E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SMART SM00490 846 930 4.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 158 1098 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SUPERFAMILY SSF52540 13 368 2.88E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Gene3D G3DSA:3.40.50.300 498 1010 2.6E-245 T 14-10-2018 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SMART SM00982 1025 1125 1.5E-32 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1162 28.396 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Pfam PF03461 TRCF domain 1026 1113 3.7E-23 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Pfam PF02559 CarD-like/TRCF domain 500 595 2.2E-28 T 14-10-2018 IPR003711 CarD-like/TRCF domain Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SUPERFAMILY SSF52540 383 488 2.84E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SMART SM00487 620 810 8.5E-36 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Gene3D G3DSA:3.90.1150.50 1024 1161 2.6E-26 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SUPERFAMILY SSF52540 543 803 3.44E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Gene3D G3DSA:3.40.50.11180 32 358 8.5E-60 T 14-10-2018 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SUPERFAMILY SSF141259 498 568 1.31E-22 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Gene3D G3DSA:3.40.50.300 562 801 2.6E-245 T 14-10-2018 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Pfam PF00270 DEAD/DEAH box helicase 625 786 1.8E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Pfam PF00271 Helicase conserved C-terminal domain 825 929 4.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Gene3D G3DSA:2.30.30.840 503 561 2.6E-245 T 14-10-2018 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 Gene3D G3DSA:3.30.2060.10 141 225 8.5E-60 T 14-10-2018 Tph_c28270 dc5137c442bd703effd22c69043f0be5 1165 SUPERFAMILY SSF143517 1017 1159 9.02E-28 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Tph_c06520 95820bc38586d2edcf953754c93128f3 324 Pfam PF02780 Transketolase, C-terminal domain 188 308 2.4E-34 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tph_c06520 95820bc38586d2edcf953754c93128f3 324 SMART SM00861 12 177 1.8E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tph_c06520 95820bc38586d2edcf953754c93128f3 324 Gene3D G3DSA:3.40.50.920 188 321 5.1E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c06520 95820bc38586d2edcf953754c93128f3 324 Gene3D G3DSA:3.40.50.970 2 185 9.6E-71 T 14-10-2018 Tph_c06520 95820bc38586d2edcf953754c93128f3 324 Pfam PF02779 Transketolase, pyrimidine binding domain 11 175 4.3E-43 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tph_c06520 95820bc38586d2edcf953754c93128f3 324 SUPERFAMILY SSF52922 182 315 3.53E-36 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c06520 95820bc38586d2edcf953754c93128f3 324 SUPERFAMILY SSF52518 7 178 7.99E-63 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c27620 fde99302f75c5e10ae6f76fd887e457e 409 Gene3D G3DSA:3.40.50.11440 34 260 7.5E-127 T 14-10-2018 Tph_c27620 fde99302f75c5e10ae6f76fd887e457e 409 Gene3D G3DSA:3.90.226.30 5 397 7.5E-127 T 14-10-2018 Tph_c27620 fde99302f75c5e10ae6f76fd887e457e 409 SUPERFAMILY SSF53335 263 342 1.39E-5 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c27620 fde99302f75c5e10ae6f76fd887e457e 409 Pfam PF09861 Domain of unknown function (DUF2088) 21 203 9.4E-61 T 14-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Tph_c21010 aff7438544137f1bc710ccf5d66ddec6 202 Gene3D G3DSA:1.10.1760.20 2 187 6.5E-59 T 14-10-2018 Tph_c21010 aff7438544137f1bc710ccf5d66ddec6 202 Pfam PF02632 BioY family 42 183 3.4E-41 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Tph_c21010 aff7438544137f1bc710ccf5d66ddec6 202 PIRSF PIRSF016661 5 192 7.9E-48 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 Pfam PF13710 ACT domain 11 73 3.6E-18 T 14-10-2018 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 Gene3D G3DSA:3.30.70.260 1 79 1.4E-39 T 14-10-2018 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 3.0E-28 T 14-10-2018 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 SUPERFAMILY SSF55021 79 160 3.59E-29 T 14-10-2018 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 Gene3D G3DSA:3.30.70.1150 83 161 8.8E-31 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 3.6E-67 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 Pfam PF10369 Small subunit of acetolactate synthase 84 157 1.7E-30 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tph_c19860 dfa10bda17548632afb9102c17e1edf5 167 SUPERFAMILY SSF55021 1 76 9.77E-26 T 14-10-2018 Tph_c09980 f79d749616db90b93402d5fe4480453f 628 Pfam PF00270 DEAD/DEAH box helicase 212 369 7.4E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Tph_c09980 f79d749616db90b93402d5fe4480453f 628 SMART SM00490 440 524 1.5E-23 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c09980 f79d749616db90b93402d5fe4480453f 628 SMART SM00487 205 395 1.1E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c09980 f79d749616db90b93402d5fe4480453f 628 Pfam PF17191 RecG wedge domain 5 115 7.4E-10 T 14-10-2018 IPR033454 RecG, wedge domain Tph_c09980 f79d749616db90b93402d5fe4480453f 628 Gene3D G3DSA:3.40.50.300 393 564 1.2E-59 T 14-10-2018 Tph_c09980 f79d749616db90b93402d5fe4480453f 628 Pfam PF00271 Helicase conserved C-terminal domain 408 523 2.1E-20 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c09980 f79d749616db90b93402d5fe4480453f 628 SUPERFAMILY SSF52540 127 388 1.08E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09980 f79d749616db90b93402d5fe4480453f 628 SUPERFAMILY SSF50249 5 122 3.6E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c09980 f79d749616db90b93402d5fe4480453f 628 Gene3D G3DSA:2.40.50.140 2 89 4.0E-13 T 14-10-2018 Tph_c09980 f79d749616db90b93402d5fe4480453f 628 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 10 597 1.0E-214 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Tph_c09980 f79d749616db90b93402d5fe4480453f 628 Gene3D G3DSA:3.40.50.300 153 386 3.0E-85 T 14-10-2018 Tph_c09980 f79d749616db90b93402d5fe4480453f 628 SUPERFAMILY SSF52540 388 589 5.33E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20640 6873e202c682f8fb57ddf1ed53400c19 363 Pfam PF10114 Sensory domain found in PocR 13 170 6.0E-25 T 14-10-2018 IPR018771 PocR domain Tph_c20640 6873e202c682f8fb57ddf1ed53400c19 363 Pfam PF06580 Histidine kinase 190 268 1.3E-21 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 Tph_c21970 c723d87e5a8650e478f87cf5254c71db 388 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 66 121 2.2E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tph_c21970 c723d87e5a8650e478f87cf5254c71db 388 SUPERFAMILY SSF56349 66 371 4.71E-73 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tph_c21970 c723d87e5a8650e478f87cf5254c71db 388 Gene3D G3DSA:1.10.443.10 178 378 7.8E-60 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tph_c21970 c723d87e5a8650e478f87cf5254c71db 388 Pfam PF00589 Phage integrase family 182 362 1.5E-28 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tph_c21970 c723d87e5a8650e478f87cf5254c71db 388 Pfam PF14657 Arm DNA-binding domain 12 57 3.8E-6 T 14-10-2018 IPR028259 AP2-like integrase, N-terminal domain Tph_c21970 c723d87e5a8650e478f87cf5254c71db 388 Gene3D G3DSA:1.10.150.130 59 177 3.1E-30 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tph_c18540 d660156eb3bf7cd29a5a16a7742980f8 234 Pfam PF00814 Glycoprotease family 31 136 3.5E-20 T 14-10-2018 IPR000905 Gcp-like domain Tph_c18540 d660156eb3bf7cd29a5a16a7742980f8 234 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 221 1.1E-43 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 Tph_c18540 d660156eb3bf7cd29a5a16a7742980f8 234 SUPERFAMILY SSF53067 108 219 1.29E-9 T 14-10-2018 Tph_c18540 d660156eb3bf7cd29a5a16a7742980f8 234 Gene3D G3DSA:3.30.420.40 95 190 1.2E-48 T 14-10-2018 Tph_c18540 d660156eb3bf7cd29a5a16a7742980f8 234 SUPERFAMILY SSF53067 1 100 1.21E-23 T 14-10-2018 Tph_c18540 d660156eb3bf7cd29a5a16a7742980f8 234 Gene3D G3DSA:3.30.420.40 3 221 1.2E-48 T 14-10-2018 Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.4E-84 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 Gene3D G3DSA:2.40.50.620 32 97 3.1E-16 T 14-10-2018 Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 SUPERFAMILY SSF50447 3 208 3.88E-79 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 Pfam PF00297 Ribosomal protein L3 101 182 1.2E-19 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 Gene3D G3DSA:2.40.30.10 137 209 1.0E-13 T 14-10-2018 Tph_c25850 4c6ac664a77f48764c9ef604db45c299 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 39.853 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c29190 10837f54ceb01631c3c4c7684346e7de 79 SUPERFAMILY SSF69025 1 79 4.05E-27 T 14-10-2018 IPR036825 MTH865-like superfamily Tph_c29190 10837f54ceb01631c3c4c7684346e7de 79 Gene3D G3DSA:1.10.238.80 1 79 2.4E-31 T 14-10-2018 IPR036825 MTH865-like superfamily Tph_c29190 10837f54ceb01631c3c4c7684346e7de 79 Pfam PF07747 MTH865-like family 7 75 9.9E-30 T 14-10-2018 IPR024093 Uncharacterised protein family MTH865 Tph_c27220 2f20b022f56673746cd5f1b854913997 188 SUPERFAMILY SSF47979 82 151 5.49E-12 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Tph_c27220 2f20b022f56673746cd5f1b854913997 188 SUPERFAMILY SSF46785 21 81 1.5E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c27220 2f20b022f56673746cd5f1b854913997 188 SMART SM00529 43 140 8.7E-21 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 Tph_c27220 2f20b022f56673746cd5f1b854913997 188 Gene3D G3DSA:1.10.60.10 93 160 8.1E-12 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 Tph_c27220 2f20b022f56673746cd5f1b854913997 188 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 21 77 1.4E-18 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Tph_c27220 2f20b022f56673746cd5f1b854913997 188 Gene3D G3DSA:1.10.10.10 21 89 2.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c27220 2f20b022f56673746cd5f1b854913997 188 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 82 144 3.4E-10 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 Tph_c03130 aa5132b97386ef802ee48378715d68c1 106 Gene3D G3DSA:1.20.1290.30 4 84 2.7E-7 T 14-10-2018 IPR037210 YoaC-like superfamily Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 SUPERFAMILY SSF69189 275 367 4.32E-16 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 253 2.1E-73 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 SMART SM00936 275 365 1.5E-18 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 Gene3D G3DSA:3.40.710.10 22 274 1.5E-90 T 14-10-2018 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 SUPERFAMILY SSF56601 1 275 2.82E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 278 365 6.3E-15 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 Gene3D G3DSA:2.60.410.10 275 364 2.8E-17 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 5.9E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 5.9E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c16050 c04cb4b620d8e32205d612769b4db377 381 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 5.9E-13 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 Gene3D G3DSA:3.40.980.10 1 167 6.2E-63 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 SUPERFAMILY SSF53218 1 152 9.55E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 PIRSF PIRSF006443 1 156 7.3E-41 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 64 77 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 Pfam PF00994 Probable molybdopterin binding domain 4 147 6.9E-40 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 SMART SM00852 4 148 4.7E-35 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01650 b92dce6478c6705703dc416cf210bf2e 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 142 2.5E-40 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Gene3D G3DSA:3.30.1360.120 5 237 9.6E-92 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Gene3D G3DSA:3.30.70.1400 54 139 9.6E-92 T 14-10-2018 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 362 6.6E-124 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 354 1.5E-26 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 SUPERFAMILY SSF101790 274 363 1.55E-22 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 PIRSF PIRSF006487 1 365 2.5E-100 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 8 259 4.1E-93 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 SUPERFAMILY SSF103025 2 282 4.87E-100 T 14-10-2018 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Gene3D G3DSA:2.40.30.110 283 355 8.9E-28 T 14-10-2018 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Gene3D G3DSA:4.10.1250.10 238 280 3.3E-18 T 14-10-2018 Tph_c17220 b5a0d51cb8b4bb5d2ff5bab6734901cd 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 2 363 44.229 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Tph_c14890 283ddeef0ba3198af4e39bb0f0c96382 183 Gene3D G3DSA:3.40.30.10 80 180 3.9E-29 T 14-10-2018 Tph_c14890 283ddeef0ba3198af4e39bb0f0c96382 183 Gene3D G3DSA:1.10.10.1590 11 79 9.4E-20 T 14-10-2018 Tph_c14890 283ddeef0ba3198af4e39bb0f0c96382 183 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 159 3.7E-49 T 14-10-2018 Tph_c14890 283ddeef0ba3198af4e39bb0f0c96382 183 SUPERFAMILY SSF52833 14 158 1.68E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c14890 283ddeef0ba3198af4e39bb0f0c96382 183 PIRSF PIRSF000216 3 183 1.1E-56 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 Pfam PF13522 Glutamine amidotransferase domain 77 212 3.9E-22 T 14-10-2018 Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 Gene3D G3DSA:3.40.50.2020 278 442 7.0E-162 T 14-10-2018 Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 Gene3D G3DSA:3.60.20.10 19 462 7.0E-162 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 18 460 47.548 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 PIRSF PIRSF000485 15 469 3.2E-178 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 19 461 7.4E-166 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 SUPERFAMILY SSF56235 19 247 2.49E-71 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c08470 9cf4413a0d31dc8116883be3b5ef5f89 469 SUPERFAMILY SSF53271 254 465 1.48E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 Gene3D G3DSA:3.50.50.60 231 364 5.2E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 Pfam PF13237 4Fe-4S dicluster domain 448 502 5.8E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 SUPERFAMILY SSF51905 140 417 1.06E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 527 648 4.0E-36 T 14-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 Gene3D G3DSA:3.50.50.60 141 413 5.2E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 Gene3D G3DSA:3.30.70.20 419 509 3.0E-9 T 14-10-2018 Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 453 464 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c15120 fb9e3c50216159c515fce3e02fe9c78c 656 SUPERFAMILY SSF54862 440 507 8.87E-13 T 14-10-2018 Tph_c00880 22cc692da990b92979df7d03ec436bf0 562 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 378 454 9.7E-7 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 Pfam PF06463 Molybdenum Cofactor Synthesis C 182 307 5.4E-35 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 1 328 38.273 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 Pfam PF13353 4Fe-4S single cluster domain 17 120 1.4E-6 T 14-10-2018 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 SMART SM00729 10 214 2.9E-7 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 328 3.8E-112 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 SUPERFAMILY SSF102114 3 275 7.85E-72 T 14-10-2018 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 Gene3D G3DSA:3.20.20.70 1 328 1.4E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 Pfam PF04055 Radical SAM superfamily 14 175 7.3E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c08330 1347a71bbcaec761764cb24386551a1b 328 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 Pfam PF01546 Peptidase family M20/M25/M40 68 390 1.2E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 Gene3D G3DSA:3.40.630.10 13 381 3.3E-77 T 14-10-2018 Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 SUPERFAMILY SSF55031 176 278 3.29E-14 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 SUPERFAMILY SSF53187 10 392 9.69E-54 T 14-10-2018 Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 Gene3D G3DSA:3.30.70.360 176 300 3.3E-77 T 14-10-2018 Tph_c27060 d98c58f1feb89861c1562326f2439cbf 395 Pfam PF07687 Peptidase dimerisation domain 173 279 7.0E-17 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 Gene3D G3DSA:3.40.50.280 34 142 6.3E-8 T 14-10-2018 Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 Pfam PF13282 Domain of unknown function (DUF4070) 358 494 4.0E-39 T 14-10-2018 IPR025274 Domain of unknown function DUF4070 Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 Pfam PF04055 Radical SAM superfamily 170 333 2.1E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 Pfam PF02310 B12 binding domain 27 127 1.3E-11 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 SUPERFAMILY SSF102114 145 393 1.57E-29 T 14-10-2018 Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 Gene3D G3DSA:3.80.30.20 163 372 8.8E-21 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c04050 26c4dd0ed04969101e6087f216b8004b 504 SMART SM00729 165 384 7.6E-19 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c27880 985cc1c700edb1d224b2b022ec2897db 211 Gene3D G3DSA:3.60.15.10 1 210 1.6E-63 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c27880 985cc1c700edb1d224b2b022ec2897db 211 Pfam PF13483 Beta-lactamase superfamily domain 4 162 4.1E-51 T 14-10-2018 Tph_c27880 985cc1c700edb1d224b2b022ec2897db 211 SUPERFAMILY SSF56281 4 188 8.39E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c28290 8940f4fa9e3ff81ecc535e9ff28ecdbc 127 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 23 120 2.3E-11 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.6E-38 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 SMART SM01403 7 101 1.9E-60 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 29.203 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 SUPERFAMILY SSF54999 5 102 1.57E-40 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.6E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.6E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.6E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 Gene3D G3DSA:3.30.70.600 1 102 1.1E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Tph_c25860 8e50a9c4fc6adb2c32d600c489bf0667 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.5E-48 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 SUPERFAMILY SSF52540 159 348 1.18E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Gene3D G3DSA:2.40.240.60 353 424 3.3E-21 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 323 6.3E-134 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 355 423 1.6E-24 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 160 180 2.0E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 181 199 2.0E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 208 223 2.0E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 243 2.0E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 ProSitePatterns PS00905 GTP1/OBG family signature. 210 223 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Gene3D G3DSA:3.40.50.300 157 336 6.1E-55 T 14-10-2018 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 SUPERFAMILY SSF102741 353 424 3.79E-20 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Pfam PF01926 50S ribosome-binding GTPase 159 281 1.9E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Pfam PF01018 GTP1/OBG 4 156 9.6E-61 T 14-10-2018 IPR006169 GTP1/OBG domain Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Gene3D G3DSA:2.70.210.12 1 156 3.3E-61 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Pfam PF09269 Domain of unknown function (DUF1967) 355 422 2.8E-23 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 PIRSF PIRSF002401 1 371 2.4E-136 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 Hamap MF_01454 GTPase Obg [obg]. 1 326 47.912 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Tph_c21570 5e44f6d8ec785f500acd0c18444f55c4 424 SUPERFAMILY SSF82051 1 156 1.7E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Tph_c23410 3ac558f682dd742812a2a678d9c05264 279 Hamap MF_02040 Iron-sulfur cluster carrier protein. 31 277 34.334 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Tph_c23410 3ac558f682dd742812a2a678d9c05264 279 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 36 262 2.9E-87 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Tph_c23410 3ac558f682dd742812a2a678d9c05264 279 SUPERFAMILY SSF52540 27 258 5.62E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23410 3ac558f682dd742812a2a678d9c05264 279 Gene3D G3DSA:3.40.50.300 22 278 1.7E-73 T 14-10-2018 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 SMART SM00917 369 500 4.9E-40 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 Pfam PF00682 HMGL-like 4 273 4.9E-100 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 Gene3D G3DSA:3.20.20.70 2 276 4.8E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 SUPERFAMILY SSF51569 2 291 1.74E-105 T 14-10-2018 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 Gene3D G3DSA:1.10.238.260 280 392 6.4E-40 T 14-10-2018 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 507 45.317 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 8.7E-232 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 Gene3D G3DSA:3.30.160.270 395 500 2.0E-10 T 14-10-2018 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 2.2E-36 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19840 f518da743aea41a11a472e9e80ab3f77 508 SUPERFAMILY SSF110921 392 499 6.67E-24 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c27830 45ccbde61859f1a0346a36387b7ae14c 284 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 284 5.6E-117 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 Tph_c27830 45ccbde61859f1a0346a36387b7ae14c 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 1.6E-110 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tph_c27830 45ccbde61859f1a0346a36387b7ae14c 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 284 7.5E-100 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tph_c27830 45ccbde61859f1a0346a36387b7ae14c 284 PIRSF PIRSF001359 1 284 1.7E-112 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 Tph_c27830 45ccbde61859f1a0346a36387b7ae14c 284 Gene3D G3DSA:3.20.20.70 1 284 4.2E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c27830 45ccbde61859f1a0346a36387b7ae14c 284 SUPERFAMILY SSF51569 3 284 1.61E-106 T 14-10-2018 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 Pfam PF04545 Sigma-70, region 4 71 120 3.3E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 Gene3D G3DSA:1.20.140.160 10 127 5.3E-17 T 14-10-2018 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 94 120 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 PRINTS PR00046 Major sigma-70 factor signature 94 109 4.5E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 PRINTS PR00046 Major sigma-70 factor signature 73 85 4.5E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 PRINTS PR00046 Major sigma-70 factor signature 109 120 4.5E-10 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 SUPERFAMILY SSF88659 36 124 4.49E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c16830 72b432189a2ee9862a14dc7ad98edd7b 129 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 41 124 3.2E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c27900 adef5625862017b36459ec623032a496 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 240 344 1.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c27900 adef5625862017b36459ec623032a496 346 Pfam PF08448 PAS fold 13 116 3.2E-5 T 14-10-2018 IPR013656 PAS fold-4 Tph_c27900 adef5625862017b36459ec623032a496 346 SMART SM00388 132 197 2.8E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c27900 adef5625862017b36459ec623032a496 346 SUPERFAMILY SSF55874 194 345 6.42E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c27900 adef5625862017b36459ec623032a496 346 SUPERFAMILY SSF47384 127 194 3.73E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c27900 adef5625862017b36459ec623032a496 346 Gene3D G3DSA:3.30.450.20 4 114 1.4E-8 T 14-10-2018 Tph_c27900 adef5625862017b36459ec623032a496 346 Gene3D G3DSA:3.30.565.10 197 346 1.5E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c27900 adef5625862017b36459ec623032a496 346 Gene3D G3DSA:1.10.287.130 117 194 4.6E-16 T 14-10-2018 Tph_c27900 adef5625862017b36459ec623032a496 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 325 4.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c27900 adef5625862017b36459ec623032a496 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 344 4.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c27900 adef5625862017b36459ec623032a496 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 306 4.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c27900 adef5625862017b36459ec623032a496 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 278 292 4.4E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c27900 adef5625862017b36459ec623032a496 346 SUPERFAMILY SSF55785 9 110 4.95E-9 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c27900 adef5625862017b36459ec623032a496 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 193 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c27900 adef5625862017b36459ec623032a496 346 SMART SM00387 239 346 3.0E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c27790 af0407104d5776b13d3cb3689c78e542 462 Gene3D G3DSA:3.40.50.1220 281 462 1.1E-77 T 14-10-2018 Tph_c27790 af0407104d5776b13d3cb3689c78e542 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 5 459 3.4E-161 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Tph_c27790 af0407104d5776b13d3cb3689c78e542 462 SUPERFAMILY SSF52467 298 461 1.33E-59 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tph_c00630 83101ce1db499a0968a3ccd57037e8f5 241 Pfam PF00156 Phosphoribosyl transferase domain 41 227 5.3E-28 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tph_c00630 83101ce1db499a0968a3ccd57037e8f5 241 Gene3D G3DSA:3.40.50.2020 36 236 1.1E-77 T 14-10-2018 Tph_c00630 83101ce1db499a0968a3ccd57037e8f5 241 Gene3D G3DSA:3.30.1310.20 86 148 1.1E-77 T 14-10-2018 Tph_c00630 83101ce1db499a0968a3ccd57037e8f5 241 SUPERFAMILY SSF53271 35 240 1.97E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Gene3D G3DSA:3.30.470.20 188 325 9.2E-58 T 14-10-2018 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Gene3D G3DSA:3.90.600.10 326 421 1.5E-38 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 42.028 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 1.1E-77 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 SMART SM01210 326 418 4.7E-54 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.8E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 SUPERFAMILY SSF51246 325 418 6.8E-31 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 2.7E-31 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Gene3D G3DSA:3.40.50.20 1 93 1.4E-36 T 14-10-2018 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 SUPERFAMILY SSF56059 102 322 1.79E-58 T 14-10-2018 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 Gene3D G3DSA:3.30.1490.20 120 187 5.2E-24 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 SMART SM01209 101 292 3.2E-128 T 14-10-2018 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 4.4E-166 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08510 635044f975e9de22ee8ad670f69b5e36 422 SUPERFAMILY SSF52440 1 101 6.04E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tph_c01760 4a89d5867a6c09509e047c73736563b7 169 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 159 1.2E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tph_c01760 4a89d5867a6c09509e047c73736563b7 169 SUPERFAMILY SSF52540 6 163 8.52E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01760 4a89d5867a6c09509e047c73736563b7 169 Gene3D G3DSA:3.40.50.300 2 166 8.2E-56 T 14-10-2018 Tph_c01760 4a89d5867a6c09509e047c73736563b7 169 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 136 3.6E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tph_c27260 f2cb4f0bc09391638916346fbb6ac495 398 SUPERFAMILY SSF103473 16 395 1.07E-41 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c27260 f2cb4f0bc09391638916346fbb6ac495 398 Gene3D G3DSA:1.20.1250.20 218 395 1.0E-14 T 14-10-2018 Tph_c27260 f2cb4f0bc09391638916346fbb6ac495 398 Pfam PF07690 Major Facilitator Superfamily 40 357 7.9E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c27260 f2cb4f0bc09391638916346fbb6ac495 398 Gene3D G3DSA:1.20.1250.20 11 209 4.3E-18 T 14-10-2018 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Gene3D G3DSA:3.40.50.2300 2 131 6.2E-30 T 14-10-2018 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Gene3D G3DSA:3.30.450.20 132 246 5.4E-20 T 14-10-2018 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SUPERFAMILY SSF55785 246 309 4.57E-8 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Pfam PF00990 Diguanylate cyclase, GGDEF domain 393 544 7.2E-47 T 14-10-2018 IPR000160 GGDEF domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SMART SM00091 262 330 19.0 T 14-10-2018 IPR000014 PAS domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SMART SM00091 136 203 0.0018 T 14-10-2018 IPR000014 PAS domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SUPERFAMILY SSF55073 397 550 2.04E-49 T 14-10-2018 IPR029787 Nucleotide cyclase Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 548 6.9E-52 T 14-10-2018 IPR000160 GGDEF domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SUPERFAMILY SSF52172 9 160 1.1E-30 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Pfam PF00072 Response regulator receiver domain 12 122 4.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Pfam PF13426 PAS domain 155 249 4.2E-5 T 14-10-2018 IPR000014 PAS domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Gene3D G3DSA:3.30.70.270 386 552 8.0E-57 T 14-10-2018 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Gene3D G3DSA:3.30.450.20 249 385 3.0E-7 T 14-10-2018 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SMART SM00448 10 122 5.5E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SUPERFAMILY SSF55785 156 256 1.36E-15 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 Pfam PF13188 PAS domain 265 298 0.025 T 14-10-2018 IPR000014 PAS domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 136 256 2.5E-18 T 14-10-2018 IPR000014 PAS domain Tph_c07780 7882fecc37ab2043f55d9c1f82d01b85 553 SMART SM00267 381 549 1.7E-60 T 14-10-2018 IPR000160 GGDEF domain Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 105 8.0E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 Gene3D G3DSA:3.40.430.10 147 371 2.1E-75 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 Gene3D G3DSA:3.40.140.10 1 146 5.1E-51 T 14-10-2018 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 94 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 PIRSF PIRSF006769 4 371 1.5E-141 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 Pfam PF01872 RibD C-terminal domain 153 364 4.3E-54 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 SUPERFAMILY SSF53927 9 151 3.76E-50 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 SUPERFAMILY SSF53597 150 368 1.05E-62 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 366 1.0E-66 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 Tph_c14050 503919c347bbf84277e688c521a8a3d5 382 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 13 364 2.6E-125 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Tph_c18670 bea2d816b42d3b52106e247899cea2ee 297 Pfam PF00753 Metallo-beta-lactamase superfamily 14 194 2.0E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c18670 bea2d816b42d3b52106e247899cea2ee 297 SMART SM00849 17 204 1.6E-29 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c18670 bea2d816b42d3b52106e247899cea2ee 297 SUPERFAMILY SSF56281 5 283 1.7E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c18670 bea2d816b42d3b52106e247899cea2ee 297 Gene3D G3DSA:3.60.15.10 1 238 3.2E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c22630 4b210eab9ce9df2dceaddb3486f0bb04 224 Gene3D G3DSA:1.10.3720.10 10 221 1.6E-48 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c22630 4b210eab9ce9df2dceaddb3486f0bb04 224 SUPERFAMILY SSF161098 13 206 5.63E-46 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c22630 4b210eab9ce9df2dceaddb3486f0bb04 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 219 1.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c03650 bb622ef916fdf61df0c323c48580957c 377 Pfam PF14286 DHHW protein 92 336 5.2E-42 T 14-10-2018 IPR025945 DHHW protein Tph_c15750 b44b7c65bb979f6024a703e012278691 125 SUPERFAMILY SSF55298 8 124 8.63E-45 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tph_c15750 b44b7c65bb979f6024a703e012278691 125 PIRSF PIRSF005965 7 125 4.7E-46 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tph_c15750 b44b7c65bb979f6024a703e012278691 125 Pfam PF07736 Chorismate mutase type I 9 124 6.7E-47 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tph_c15750 b44b7c65bb979f6024a703e012278691 125 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 9 124 2.4E-43 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tph_c15750 b44b7c65bb979f6024a703e012278691 125 Gene3D G3DSA:3.30.1330.40 8 125 4.7E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tph_c15750 b44b7c65bb979f6024a703e012278691 125 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 15 124 6.0E-30 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Tph_c15880 6e6913672a5ffbadda1220be23182be1 138 PIRSF PIRSF021377 1 137 8.1E-54 T 14-10-2018 IPR014229 Sporulation protein YtfJ Tph_c15880 6e6913672a5ffbadda1220be23182be1 138 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 125 9.0E-55 T 14-10-2018 IPR014229 Sporulation protein YtfJ Tph_c15880 6e6913672a5ffbadda1220be23182be1 138 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 115 4.2E-28 T 14-10-2018 IPR014229 Sporulation protein YtfJ Tph_c27500 e8bff95d7fc98d1418bdc7fec87466e9 163 Pfam PF02502 Ribose/Galactose Isomerase 5 142 1.0E-57 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tph_c27500 e8bff95d7fc98d1418bdc7fec87466e9 163 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 5 148 3.6E-58 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tph_c27500 e8bff95d7fc98d1418bdc7fec87466e9 163 Gene3D G3DSA:3.40.1400.10 1 149 1.0E-62 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tph_c27500 e8bff95d7fc98d1418bdc7fec87466e9 163 PIRSF PIRSF005384 3 148 9.7E-61 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tph_c27500 e8bff95d7fc98d1418bdc7fec87466e9 163 SUPERFAMILY SSF89623 3 146 2.35E-59 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Tph_c27500 e8bff95d7fc98d1418bdc7fec87466e9 163 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 4 146 1.6E-54 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 SUPERFAMILY SSF52151 4 305 1.75E-70 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 Gene3D G3DSA:3.30.70.250 124 195 1.5E-94 T 14-10-2018 Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 310 3.5E-49 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 Pfam PF00698 Acyl transferase domain 6 288 7.8E-42 T 14-10-2018 IPR014043 Acyl transferase Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 SUPERFAMILY SSF55048 127 195 1.03E-17 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 286 5.4E-99 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 Gene3D G3DSA:3.40.366.10 6 282 1.5E-94 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Tph_c13740 7f30fcdd2850f061ad53ed7fcc824fbf 311 PIRSF PIRSF000446 1 307 4.2E-103 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 Tph_c08170 882977cac1394452972b9c2fa9e74440 228 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 62 90 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Tph_c08170 882977cac1394452972b9c2fa9e74440 228 Pfam PF01464 Transglycosylase SLT domain 44 150 9.9E-31 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Tph_c08170 882977cac1394452972b9c2fa9e74440 228 Gene3D G3DSA:1.10.530.10 7 165 1.9E-46 T 14-10-2018 Tph_c08170 882977cac1394452972b9c2fa9e74440 228 SUPERFAMILY SSF53955 31 161 9.38E-49 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tph_c11280 2abf033837fb5ad80196215d25586346 359 Gene3D G3DSA:2.40.50.140 129 197 5.2E-26 T 14-10-2018 Tph_c11280 2abf033837fb5ad80196215d25586346 359 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.1E-133 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Gene3D G3DSA:3.30.1480.10 1 128 1.1E-47 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Tph_c11280 2abf033837fb5ad80196215d25586346 359 SMART SM00316 133 199 3.1E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Pfam PF00575 S1 RNA binding domain 133 194 1.1E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 355 30.655 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Tph_c11280 2abf033837fb5ad80196215d25586346 359 SUPERFAMILY SSF50249 132 198 2.04E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c11280 2abf033837fb5ad80196215d25586346 359 SUPERFAMILY SSF69705 1 126 4.45E-42 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Pfam PF13184 NusA-like KH domain 229 297 1.7E-29 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Tph_c11280 2abf033837fb5ad80196215d25586346 359 SMART SM00322 229 302 0.0085 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tph_c11280 2abf033837fb5ad80196215d25586346 359 SMART SM00322 303 356 17.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Pfam PF08529 NusA N-terminal domain 4 123 2.1E-45 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Gene3D G3DSA:3.30.300.20 198 276 7.3E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c11280 2abf033837fb5ad80196215d25586346 359 SUPERFAMILY SSF54814 199 276 6.54E-31 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tph_c11280 2abf033837fb5ad80196215d25586346 359 Gene3D G3DSA:3.30.300.20 277 358 2.2E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c11280 2abf033837fb5ad80196215d25586346 359 SUPERFAMILY SSF54814 278 341 1.96E-17 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 Gene3D G3DSA:2.40.340.10 331 398 7.5E-110 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 SUPERFAMILY SSF63882 5 177 6.41E-52 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 SMART SM00852 182 320 3.0E-38 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 Gene3D G3DSA:3.40.980.10 177 330 7.5E-110 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 179 314 3.4E-28 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 SUPERFAMILY SSF63867 330 399 2.45E-6 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 Gene3D G3DSA:3.90.105.10 25 176 7.5E-110 T 14-10-2018 Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 169 1.6E-41 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 SUPERFAMILY SSF53218 178 324 3.01E-35 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 Pfam PF00994 Probable molybdopterin binding domain 182 319 2.2E-24 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01770 ec7f75b87a0f4ad4e6a03924b7424ae7 414 Gene3D G3DSA:2.170.190.11 47 143 7.5E-110 T 14-10-2018 Tph_c07520 6ffd9a18e1afff6ad616880fd6dfa598 361 SUPERFAMILY SSF51261 236 360 8.76E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c07520 6ffd9a18e1afff6ad616880fd6dfa598 361 Gene3D G3DSA:2.70.70.10 232 361 8.2E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c07520 6ffd9a18e1afff6ad616880fd6dfa598 361 Pfam PF01551 Peptidase family M23 261 356 2.0E-34 T 14-10-2018 IPR016047 Peptidase M23 Tph_c19590 e29aa87ca01d03bcd5b8cb2ed59da42d 489 Pfam PF02913 FAD linked oxidases, C-terminal domain 237 457 7.9E-21 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tph_c19590 e29aa87ca01d03bcd5b8cb2ed59da42d 489 Gene3D G3DSA:1.10.45.10 418 457 5.2E-8 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Tph_c19590 e29aa87ca01d03bcd5b8cb2ed59da42d 489 Gene3D G3DSA:3.30.465.40 32 237 3.7E-45 T 14-10-2018 Tph_c19590 e29aa87ca01d03bcd5b8cb2ed59da42d 489 SUPERFAMILY SSF56176 15 219 4.3E-45 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tph_c19590 e29aa87ca01d03bcd5b8cb2ed59da42d 489 Pfam PF01565 FAD binding domain 52 190 6.8E-36 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tph_c19590 e29aa87ca01d03bcd5b8cb2ed59da42d 489 SUPERFAMILY SSF55103 199 458 1.8E-27 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Gene3D G3DSA:3.40.50.300 378 560 2.1E-62 T 14-10-2018 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Pfam PF00158 Sigma-54 interaction domain 390 556 2.8E-63 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 SMART SM00382 410 553 4.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Gene3D G3DSA:1.10.10.60 659 701 6.7E-16 T 14-10-2018 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Gene3D G3DSA:1.10.8.60 561 627 3.3E-20 T 14-10-2018 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Gene3D G3DSA:3.30.450.40 50 244 5.2E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 SMART SM00091 264 332 1.3E-4 T 14-10-2018 IPR000014 PAS domain Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 603 612 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 476 491 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Pfam PF02954 Bacterial regulatory protein, Fis family 659 699 1.4E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 414 427 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Gene3D G3DSA:3.30.450.20 266 372 3.4E-17 T 14-10-2018 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 SUPERFAMILY SSF55785 251 353 1.92E-12 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 682 702 2.9E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 665 682 2.9E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 Pfam PF00989 PAS fold 265 327 1.8E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 SUPERFAMILY SSF46689 603 701 3.58E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c01340 83a7f3d79ef9f254de6037eca6ae2058 703 SUPERFAMILY SSF52540 389 633 6.46E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Gene3D G3DSA:3.90.1440.10 227 348 3.4E-189 T 14-10-2018 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Pfam PF07516 SecA Wing and Scaffold domain 625 836 9.3E-73 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Gene3D G3DSA:3.40.50.300 20 395 3.4E-189 T 14-10-2018 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 825 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 839 20.885 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 SUPERFAMILY SSF81886 628 880 4.84E-84 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Gene3D G3DSA:1.10.3060.10 629 835 2.6E-79 T 14-10-2018 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Pfam PF01043 SecA preprotein cross-linking domain 231 338 6.3E-42 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 99 113 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 319 341 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 115 125 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 61 85 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 356 373 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 393 406 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 PRINTS PR00906 SecA protein signature 168 188 7.5E-72 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 SUPERFAMILY SSF81767 225 348 5.89E-47 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Pfam PF02810 SEC-C motif 872 890 1.1E-9 T 14-10-2018 IPR004027 SEC-C motif Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Pfam PF07517 SecA DEAD-like domain 6 382 1.3E-137 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 SMART SM00957 5 382 4.4E-297 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 SUPERFAMILY SSF52540 9 395 2.3E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 SUPERFAMILY SSF52540 397 625 9.02E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 SMART SM00958 226 338 1.3E-69 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Gene3D G3DSA:3.10.450.50 836 890 1.8E-9 T 14-10-2018 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 ProSitePatterns PS01312 SecA family signature. 480 495 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Tph_c06470 4ea2d120818b891ca04a35fb99d2864d 890 Gene3D G3DSA:3.40.50.300 397 627 2.9E-96 T 14-10-2018 Tph_c19740 ed13bdbc5ad24116516b238bec31ce33 317 Pfam PF07949 YbbR-like protein 47 124 8.5E-7 T 14-10-2018 IPR012505 YbbR-like Tph_c19740 ed13bdbc5ad24116516b238bec31ce33 317 Pfam PF07949 YbbR-like protein 133 213 1.7E-8 T 14-10-2018 IPR012505 YbbR-like Tph_c19740 ed13bdbc5ad24116516b238bec31ce33 317 Pfam PF07949 YbbR-like protein 229 304 1.3E-14 T 14-10-2018 IPR012505 YbbR-like Tph_c19740 ed13bdbc5ad24116516b238bec31ce33 317 Gene3D G3DSA:2.170.120.40 130 217 4.1E-11 T 14-10-2018 Tph_c19740 ed13bdbc5ad24116516b238bec31ce33 317 Gene3D G3DSA:2.170.120.40 222 307 2.6E-15 T 14-10-2018 Tph_c19740 ed13bdbc5ad24116516b238bec31ce33 317 Gene3D G3DSA:2.170.120.30 40 128 1.6E-18 T 14-10-2018 Tph_c17060 b216e2bbd29ba2f750129ae7809c06b9 172 SUPERFAMILY SSF55469 1 171 9.42E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tph_c17060 b216e2bbd29ba2f750129ae7809c06b9 172 Gene3D G3DSA:3.40.109.10 2 172 2.2E-47 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tph_c17060 b216e2bbd29ba2f750129ae7809c06b9 172 Pfam PF00881 Nitroreductase family 7 61 5.1E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tph_c17060 b216e2bbd29ba2f750129ae7809c06b9 172 Pfam PF00881 Nitroreductase family 90 149 9.8E-12 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 Gene3D G3DSA:3.40.710.10 140 391 5.0E-95 T 14-10-2018 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 Gene3D G3DSA:2.60.410.10 392 477 1.1E-18 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 226 243 2.6E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 253 266 2.6E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 178 189 2.6E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 388 476 5.0E-16 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 SMART SM00936 388 478 6.5E-14 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 SUPERFAMILY SSF69189 380 476 7.85E-16 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 SUPERFAMILY SSF56601 118 388 6.0E-73 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c15870 87ced2dfc4e3fb44e5a167301bce5b6d 499 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 148 371 3.0E-73 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Tph_c19040 c07dd300cd28b66358137987ec1d90d4 254 Gene3D G3DSA:1.10.3210.30 3 226 3.0E-13 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Tph_c19040 c07dd300cd28b66358137987ec1d90d4 254 SUPERFAMILY SSF109604 16 61 9.42E-6 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.30.70.20 592 674 4.5E-25 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 PRINTS PR00419 Adrenodoxin reductase family signature 193 215 2.1E-20 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 PRINTS PR00419 Adrenodoxin reductase family signature 258 268 2.1E-20 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 PRINTS PR00419 Adrenodoxin reductase family signature 216 229 2.1E-20 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 PRINTS PR00419 Adrenodoxin reductase family signature 324 338 2.1E-20 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 PRINTS PR00419 Adrenodoxin reductase family signature 358 371 2.1E-20 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 2.9E-17 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:2.20.25.90 686 734 1.7E-7 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 SUPERFAMILY SSF51971 190 434 6.47E-65 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.10.20.740 1 115 1.3E-37 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 SMART SM00926 685 734 3.5E-5 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.50.50.60 320 517 3.8E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.50.50.60 189 313 1.7E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 SUPERFAMILY SSF53706 686 1106 5.23E-67 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 193 486 7.5E-32 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1041 1058 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.40.50.740 1002 1099 4.0E-15 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 100 178 2.3E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 SUPERFAMILY SSF54862 559 675 4.35E-24 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.40.50.740 741 995 2.0E-18 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Pfam PF00037 4Fe-4S binding domain 653 671 3.9E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 SUPERFAMILY SSF54292 1 99 7.76E-31 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 656 667 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 SUPERFAMILY SSF46548 81 202 4.24E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Gene3D G3DSA:3.40.228.10 810 989 2.0E-18 T 14-10-2018 Tph_c21680 bcf09fbdbacd1e7f9bb1768e1afb6e5b 1158 Pfam PF00384 Molybdopterin oxidoreductase 736 1094 1.1E-19 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 Gene3D G3DSA:3.20.20.70 1 220 4.4E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 Pfam PF01791 DeoC/LacD family aldolase 15 200 2.5E-15 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 PIRSF PIRSF001357 1 220 5.4E-66 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 216 1.8E-68 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 SUPERFAMILY SSF51569 2 219 3.66E-70 T 14-10-2018 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 2 220 30.891 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 Tph_c22680 25aab76277fa36c14c213ce7d67a88fc 220 SMART SM01133 3 220 2.1E-70 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Tph_c01370 7abdd6f1fdd30c3d11fec3434e79ba02 340 Pfam PF07900 Protein of unknown function (DUF1670) 114 297 1.3E-43 T 14-10-2018 IPR012872 Protein of unknown function DUF1670 Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 346 38.895 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 Pfam PF00072 Response regulator receiver domain 1 105 2.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 Gene3D G3DSA:3.40.50.180 149 348 1.2E-73 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 SUPERFAMILY SSF52172 1 118 3.7E-28 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 Gene3D G3DSA:3.40.50.2300 1 135 3.3E-32 T 14-10-2018 Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 PIRSF PIRSF000876 1 348 2.0E-133 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 SMART SM00448 1 115 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 SUPERFAMILY SSF52738 157 347 4.18E-66 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Tph_c11060 83a94a6e12f0e3e6af1d4d9674d74c78 348 Pfam PF01339 CheB methylesterase 159 341 1.7E-63 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 SUPERFAMILY SSF52540 122 340 6.53E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 SMART SM00382 141 295 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 Gene3D G3DSA:3.30.230.10 379 508 1.4E-18 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 SUPERFAMILY SSF54211 306 506 7.21E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 418 507 7.7E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 Hamap MF_01498 DNA repair protein RadA [radA]. 75 507 42.488 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 Pfam PF13481 AAA domain 119 273 1.8E-18 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 Gene3D G3DSA:3.40.50.300 118 336 3.9E-40 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 TIGRFAM TIGR00416 sms: DNA repair protein RadA 57 503 1.4E-170 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 175 192 5.1E-82 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 133 161 5.1E-82 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 373 396 5.1E-82 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 225 249 5.1E-82 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 299 325 5.1E-82 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 264 292 5.1E-82 T 14-10-2018 Tph_c03810 e012c3113e63b08dffb30c5879ae42e7 510 PRINTS PR01874 DNA repair protein radA signature 64 88 5.1E-82 T 14-10-2018 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 SUPERFAMILY SSF46955 4 50 6.41E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 Pfam PF00376 MerR family regulatory protein 5 41 3.0E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 SUPERFAMILY SSF53041 62 109 1.09E-7 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 Gene3D G3DSA:1.10.1660.10 1 57 1.0E-14 T 14-10-2018 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 SMART SM00422 4 53 2.0E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 Pfam PF00239 Resolvase, N terminal domain 62 109 5.1E-8 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c28950 eb015d23fc94ee150c5cb95a154598bf 118 Gene3D G3DSA:3.40.50.1390 59 113 2.7E-9 T 14-10-2018 Tph_c13880 ad027f57d3937e541ddedd68c4da1e15 559 SUPERFAMILY SSF53067 2 458 4.33E-13 T 14-10-2018 Tph_c13880 ad027f57d3937e541ddedd68c4da1e15 559 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 3 160 1.9E-28 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Tph_c13880 ad027f57d3937e541ddedd68c4da1e15 559 Pfam PF01968 Hydantoinase/oxoprolinase 181 461 1.8E-42 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 SUPERFAMILY SSF75615 117 212 1.96E-24 T 14-10-2018 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 Pfam PF13241 Putative NAD(P)-binding 9 118 1.3E-33 T 14-10-2018 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 Gene3D G3DSA:1.10.8.610 134 208 6.9E-7 T 14-10-2018 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 208 3.9E-58 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 Gene3D G3DSA:3.40.50.720 6 133 2.7E-45 T 14-10-2018 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 Pfam PF14824 Sirohaem biosynthesis protein central 122 149 1.5E-10 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 Pfam PF10414 Sirohaem synthase dimerisation region 154 187 6.9E-8 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c15350 0d363a0325499f703a8734c6c024e38f 215 SUPERFAMILY SSF51735 4 115 1.65E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 400 1.9E-227 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 SUPERFAMILY SSF50465 304 399 1.73E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.7E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.5E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Pfam PF03143 Elongation factor Tu C-terminal domain 304 398 4.6E-34 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Gene3D G3DSA:2.40.30.10 211 340 7.4E-56 T 14-10-2018 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Pfam PF00009 Elongation factor Tu GTP binding domain 10 206 2.1E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 SUPERFAMILY SSF50447 210 307 1.45E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Gene3D G3DSA:3.40.50.300 1 208 7.7E-71 T 14-10-2018 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 SUPERFAMILY SSF52540 9 231 4.02E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 400 61.334 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Gene3D G3DSA:2.40.30.10 344 399 1.5E-29 T 14-10-2018 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 Pfam PF03144 Elongation factor Tu domain 2 230 299 1.9E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tph_c25870 48d0249bad56c2a0543f986dd7dfa636 400 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 Gene3D G3DSA:1.10.287.470 113 221 3.4E-65 T 14-10-2018 Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 Gene3D G3DSA:2.40.50.100 79 255 3.4E-65 T 14-10-2018 Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 SUPERFAMILY SSF111369 78 328 3.27E-14 T 14-10-2018 Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 Gene3D G3DSA:2.40.420.20 336 393 3.4E-65 T 14-10-2018 Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 79 393 6.5E-45 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 Gene3D G3DSA:2.40.30.170 78 335 3.4E-65 T 14-10-2018 Tph_c23590 c6b9aa1481081581507e0adae5e1f6eb 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 83 327 4.2E-22 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tph_c13890 3578d982472d9a205057426d519b4429 881 SMART SM00533 290 598 5.3E-103 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 Gene3D G3DSA:3.30.420.110 124 267 3.3E-24 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 Gene3D G3DSA:3.40.1170.10 1 117 1.4E-47 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tph_c13890 3578d982472d9a205057426d519b4429 881 Pfam PF05190 MutS family domain IV 435 525 5.6E-28 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 Pfam PF01624 MutS domain I 5 115 1.1E-43 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tph_c13890 3578d982472d9a205057426d519b4429 881 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 856 24.464 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 697 713 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 SUPERFAMILY SSF52540 574 806 8.98E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13890 3578d982472d9a205057426d519b4429 881 Gene3D G3DSA:3.40.50.300 575 875 1.7E-102 T 14-10-2018 Tph_c13890 3578d982472d9a205057426d519b4429 881 Gene3D G3DSA:1.10.1420.10 272 567 2.9E-103 T 14-10-2018 Tph_c13890 3578d982472d9a205057426d519b4429 881 SUPERFAMILY SSF53150 115 286 2.62E-29 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 SUPERFAMILY SSF48334 273 572 6.54E-91 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Tph_c13890 3578d982472d9a205057426d519b4429 881 Pfam PF05192 MutS domain III 276 566 2.9E-47 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 Pfam PF05188 MutS domain II 125 255 1.2E-16 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 Gene3D G3DSA:1.10.1420.10 407 542 2.9E-103 T 14-10-2018 Tph_c13890 3578d982472d9a205057426d519b4429 881 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 5 862 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 PIRSF PIRSF037677 1 853 2.3E-172 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 Pfam PF00488 MutS domain V 619 806 2.8E-80 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 SMART SM00534 616 803 3.0E-109 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13890 3578d982472d9a205057426d519b4429 881 SUPERFAMILY SSF55271 3 112 1.57E-42 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 Tph_c13780 057cdc12f9486c488463dc612c2d5b0e 227 Pfam PF06838 Methionine gamma-lyase 20 227 3.6E-81 T 14-10-2018 IPR009651 Putative methionine gamma-lyase Tph_c13780 057cdc12f9486c488463dc612c2d5b0e 227 Gene3D G3DSA:3.40.640.10 65 227 1.2E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c13780 057cdc12f9486c488463dc612c2d5b0e 227 SUPERFAMILY SSF53383 45 221 8.06E-22 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c28050 7b1485b2748631f0481772934787196a 217 Gene3D G3DSA:3.40.50.150 17 187 1.9E-35 T 14-10-2018 Tph_c28050 7b1485b2748631f0481772934787196a 217 SUPERFAMILY SSF53335 26 187 2.43E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c28050 7b1485b2748631f0481772934787196a 217 Pfam PF10294 Lysine methyltransferase 42 166 9.3E-13 T 14-10-2018 IPR019410 Lysine methyltransferase Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 Pfam PF04055 Radical SAM superfamily 148 318 4.6E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 Gene3D G3DSA:2.40.50.140 375 436 2.3E-14 T 14-10-2018 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 2 435 58.605 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 Pfam PF00919 Uncharacterized protein family UPF0004 4 103 2.2E-22 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 Gene3D G3DSA:3.80.30.20 141 374 5.7E-74 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 433 7.2E-113 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 Gene3D G3DSA:3.40.50.12160 2 130 2.0E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 SMART SM00729 142 360 4.5E-49 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 SUPERFAMILY SSF102114 134 363 1.31E-52 T 14-10-2018 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 4 433 4.9E-131 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 Tph_c11530 704ba2df2bdf6e301268c73f21f7e217 436 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tph_c00490 6d32d47f2ebd5d7514a94ae2bd27adfd 241 SUPERFAMILY SSF52540 7 238 2.0E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00490 6d32d47f2ebd5d7514a94ae2bd27adfd 241 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c00490 6d32d47f2ebd5d7514a94ae2bd27adfd 241 PIRSF PIRSF039137 4 241 1.4E-115 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 Tph_c00490 6d32d47f2ebd5d7514a94ae2bd27adfd 241 Pfam PF00005 ABC transporter 24 169 4.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c00490 6d32d47f2ebd5d7514a94ae2bd27adfd 241 SMART SM00382 33 220 2.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c00490 6d32d47f2ebd5d7514a94ae2bd27adfd 241 Gene3D G3DSA:3.40.50.300 4 241 1.9E-68 T 14-10-2018 Tph_c01470 851ec2b6fedc0303bb6f75b9ce6308fa 134 SUPERFAMILY SSF50475 4 122 7.5E-23 T 14-10-2018 Tph_c01470 851ec2b6fedc0303bb6f75b9ce6308fa 134 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 4 90 7.0E-13 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Tph_c01470 851ec2b6fedc0303bb6f75b9ce6308fa 134 Gene3D G3DSA:2.30.110.10 3 134 1.7E-33 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 142 30.951 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 Gene3D G3DSA:3.30.1550.10 3 72 3.8E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 SUPERFAMILY SSF54747 3 85 9.81E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 37 74 6.0E-14 T 14-10-2018 Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 SUPERFAMILY SSF46906 68 140 4.32E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.1E-25 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 141 1.9E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 1.3E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 Gene3D G3DSA:1.10.10.250 73 141 5.5E-28 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Tph_c26080 8dafc03b010297340543a5f5b22fa716 142 SMART SM00649 10 141 1.1E-83 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Tph_c18370 553c248e4be09db4daf1f23bee6de5ce 235 Gene3D G3DSA:3.40.50.150 1 158 1.7E-52 T 14-10-2018 Tph_c18370 553c248e4be09db4daf1f23bee6de5ce 235 PIRSF PIRSF018637 1 234 4.8E-70 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 Tph_c18370 553c248e4be09db4daf1f23bee6de5ce 235 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 21 228 3.0E-53 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 Tph_c18370 553c248e4be09db4daf1f23bee6de5ce 235 SUPERFAMILY SSF53335 6 118 2.17E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c21090 58e4443600f77c10455d926cc629d223 247 SUPERFAMILY SSF88697 3 65 1.14E-7 T 14-10-2018 IPR015947 PUA-like superfamily Tph_c21090 58e4443600f77c10455d926cc629d223 247 Gene3D G3DSA:3.40.1280.10 1 245 1.9E-72 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tph_c21090 58e4443600f77c10455d926cc629d223 247 SUPERFAMILY SSF75217 71 245 4.08E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tph_c21090 58e4443600f77c10455d926cc629d223 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 242 4.8E-46 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tph_c21090 58e4443600f77c10455d926cc629d223 247 PIRSF PIRSF015601 1 244 2.0E-50 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tph_c21090 58e4443600f77c10455d926cc629d223 247 Pfam PF04452 RNA methyltransferase 17 239 7.0E-61 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.7E-80 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 Gene3D G3DSA:3.40.50.300 1 215 3.6E-83 T 14-10-2018 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 1.9E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 PRINTS PR00094 Adenylate kinase signature 177 191 1.5E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 PRINTS PR00094 Adenylate kinase signature 32 46 1.5E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 PRINTS PR00094 Adenylate kinase signature 4 17 1.5E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 PRINTS PR00094 Adenylate kinase signature 160 175 1.5E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 PRINTS PR00094 Adenylate kinase signature 81 97 1.5E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 SUPERFAMILY SSF52540 1 214 1.15E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 51.486 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Tph_c25650 d18283d0eca61eececcbe045060fcc77 216 Pfam PF00406 Adenylate kinase 5 190 2.7E-56 T 14-10-2018 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 10 137 20.423 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 SUPERFAMILY SSF51344 10 92 4.97E-19 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 12 90 1.3E-20 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 SUPERFAMILY SSF46604 95 140 1.46E-7 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 Gene3D G3DSA:1.20.5.440 97 140 1.4E-12 T 14-10-2018 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 95 139 2.2E-13 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 11 139 6.4E-29 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 33 94 9.0E-9 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27360 cc9443bd80d0d8624bba595ccd092654 146 Gene3D G3DSA:2.60.15.10 10 96 1.6E-24 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 SUPERFAMILY SSF117143 93 383 3.01E-72 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 Pfam PF07559 Flagellar basal body protein FlaE 200 303 6.3E-14 T 14-10-2018 IPR011491 Flagellar hook protein FlgE Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 Pfam PF00460 Flagella basal body rod protein 7 35 5.4E-13 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 343 421 1.5E-22 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 Gene3D G3DSA:2.60.98.20 166 304 6.8E-17 T 14-10-2018 IPR037058 Flagellar hook protein FlgE superfamily Tph_c10910 a77afa098e5616128c365f6b88ea3893 423 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 404 4.3E-90 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tph_c11740 97f0a67a87bbe7493495bc64cd7ab6d3 466 Pfam PF05762 VWA domain containing CoxE-like protein 242 460 4.9E-37 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like Tph_c11740 97f0a67a87bbe7493495bc64cd7ab6d3 466 PIRSF PIRSF010256 207 466 3.2E-64 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 Tph_c11740 97f0a67a87bbe7493495bc64cd7ab6d3 466 PIRSF PIRSF010256 1 141 2.6E-15 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 Gene3D G3DSA:3.40.50.1000 6 201 1.1E-52 T 14-10-2018 IPR023214 HAD superfamily Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 93 106 1.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 124 140 1.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 162 1.1E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 63 174 2.1E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 180 9.9E-44 T 14-10-2018 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 180 2.4E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 SUPERFAMILY SSF56784 3 208 6.14E-58 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c18680 8597815a75f50e21f1c731cee06b4fdf 223 Gene3D G3DSA:1.10.150.240 18 79 1.1E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 SMART SM00904 182 307 7.6E-49 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 PIRSF PIRSF004491 1 312 7.2E-98 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.7E-76 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 SUPERFAMILY SSF82114 173 310 1.68E-42 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 Gene3D G3DSA:2.40.30.30 188 314 1.3E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 SUPERFAMILY SSF52374 15 176 1.86E-28 T 14-10-2018 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 Pfam PF06574 FAD synthetase 13 165 1.4E-44 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 Pfam PF01687 Riboflavin kinase 183 306 1.4E-33 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Tph_c11350 42ce8ddb960ee1b0e24fa5341d421135 315 Gene3D G3DSA:3.40.50.620 1 185 4.3E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 32.283 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 PIRSF PIRSF002191 1 113 7.7E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 PRINTS PR00061 Ribosomal protein L19 signature 87 112 2.2E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 PRINTS PR00061 Ribosomal protein L19 signature 33 62 2.2E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 PRINTS PR00061 Ribosomal protein L19 signature 3 32 2.2E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 SUPERFAMILY SSF50104 2 112 5.92E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 Pfam PF01245 Ribosomal protein L19 3 112 2.1E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 112 8.0E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10270 fcfe9e4ec7979c7e4be0b9980ff27cf9 113 Gene3D G3DSA:2.30.30.790 8 113 5.7E-16 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c05620 076c08ad122960084aaa657e00cd178c 456 TIGRFAM TIGR04385 B12_rSAM_cofa1: putative variant cofactor biosynthesis B12-binding domain/radical SAM domain protein 1 2 438 2.6E-213 T 14-10-2018 IPR030837 Putative variant cofactor biosynthesis B12-binding domain/radical SAM domain protein 1 Tph_c05620 076c08ad122960084aaa657e00cd178c 456 Pfam PF02310 B12 binding domain 17 138 1.1E-22 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c05620 076c08ad122960084aaa657e00cd178c 456 Gene3D G3DSA:3.80.30.20 194 371 1.8E-18 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c05620 076c08ad122960084aaa657e00cd178c 456 SMART SM00729 194 413 3.1E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c05620 076c08ad122960084aaa657e00cd178c 456 SUPERFAMILY SSF102114 196 406 4.19E-30 T 14-10-2018 Tph_c05620 076c08ad122960084aaa657e00cd178c 456 Pfam PF04055 Radical SAM superfamily 199 354 3.6E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 SUPERFAMILY SSF52540 155 547 1.72E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 Pfam PF00437 Type II/IV secretion system protein 178 443 1.3E-85 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 SMART SM00382 305 426 0.0014 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 Gene3D G3DSA:3.40.50.300 279 553 3.1E-114 T 14-10-2018 Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 372 386 - T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 11 140 9.7E-19 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 Gene3D G3DSA:3.30.300.160 58 137 1.2E-13 T 14-10-2018 Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 SUPERFAMILY SSF160246 4 137 1.65E-34 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Tph_c16650 0ed3b1c352f95359231765c1c00b4df3 553 Gene3D G3DSA:3.30.450.90 140 276 2.4E-50 T 14-10-2018 Tph_c26680 4de821a4db1bace7b1605fda860a31fe 337 Gene3D G3DSA:3.20.20.70 76 332 4.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26680 4de821a4db1bace7b1605fda860a31fe 337 Pfam PF00793 DAHP synthetase I family 93 324 6.8E-76 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tph_c26680 4de821a4db1bace7b1605fda860a31fe 337 Gene3D G3DSA:3.30.70.1140 1 75 1.9E-26 T 14-10-2018 Tph_c26680 4de821a4db1bace7b1605fda860a31fe 337 SUPERFAMILY SSF51569 1 335 3.39E-121 T 14-10-2018 Tph_c26680 4de821a4db1bace7b1605fda860a31fe 337 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 327 3.8E-119 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tph_c16840 6be7bc18ef57b21fd0e51f25c69fd230 83 Pfam PF07561 Domain of Unknown Function (DUF1540) 7 67 4.1E-16 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 SMART SM00226 1 224 9.8E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 Gene3D G3DSA:3.40.50.2300 140 228 3.6E-5 T 14-10-2018 Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 SUPERFAMILY SSF52788 1 225 1.2E-38 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 116 1.2E-34 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 Gene3D G3DSA:3.40.50.2300 1 139 3.2E-42 T 14-10-2018 Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 1.3E-8 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.3E-8 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tph_c27510 3b1b525413ad6439dc3057b9098b5412 229 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 1.3E-8 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 Pfam PF07702 UTRA domain 101 240 6.1E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 SUPERFAMILY SSF64288 67 243 4.08E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 Gene3D G3DSA:1.10.10.10 14 82 9.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 SUPERFAMILY SSF46785 9 89 7.14E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 7.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 7.5E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 SMART SM00345 20 79 3.0E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 79 1.8E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 Gene3D G3DSA:3.40.1410.10 83 244 6.5E-36 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Tph_c01790 864f35c55a46c5c9cf100859cdc1461b 252 SMART SM00866 100 240 1.5E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Tph_c00550 3b8d92acd2ea70338daae4ae3e1dbc8e 136 Gene3D G3DSA:3.40.50.1010 2 129 9.1E-14 T 14-10-2018 Tph_c00550 3b8d92acd2ea70338daae4ae3e1dbc8e 136 Pfam PF13470 PIN domain 3 117 3.2E-17 T 14-10-2018 IPR002716 PIN domain Tph_c00550 3b8d92acd2ea70338daae4ae3e1dbc8e 136 SUPERFAMILY SSF88723 1 132 1.21E-21 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c05060 e717d315319527a05e831bfb7274ed80 189 SUPERFAMILY SSF48371 5 181 1.77E-25 T 14-10-2018 IPR016024 Armadillo-type fold Tph_c05060 e717d315319527a05e831bfb7274ed80 189 Gene3D G3DSA:1.25.10.10 1 188 2.7E-26 T 14-10-2018 IPR011989 Armadillo-like helical Tph_c05060 e717d315319527a05e831bfb7274ed80 189 SMART SM00567 E-Z type HEAT repeats 48 77 5.7 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Tph_c05060 e717d315319527a05e831bfb7274ed80 189 SMART SM00567 E-Z type HEAT repeats 79 107 300.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Tph_c05060 e717d315319527a05e831bfb7274ed80 189 SMART SM00567 E-Z type HEAT repeats 141 174 310.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Tph_c05060 e717d315319527a05e831bfb7274ed80 189 SMART SM00567 E-Z type HEAT repeats 16 45 0.87 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Tph_c05060 e717d315319527a05e831bfb7274ed80 189 Pfam PF13646 HEAT repeats 98 174 1.7E-9 T 14-10-2018 Tph_c05060 e717d315319527a05e831bfb7274ed80 189 Pfam PF13646 HEAT repeats 5 87 9.4E-12 T 14-10-2018 Tph_c07820 79188733b831a250bc32d04a8fc933b0 134 SUPERFAMILY SSF88659 54 133 4.67E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c07820 79188733b831a250bc32d04a8fc933b0 134 Gene3D G3DSA:1.10.10.10 54 134 8.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 SUPERFAMILY SSF51569 3 299 2.2E-86 T 14-10-2018 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 Gene3D G3DSA:3.20.20.70 2 454 6.8E-175 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 Pfam PF02436 Conserved carboxylase domain 291 453 3.9E-58 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 SUPERFAMILY SSF51230 561 637 7.33E-24 T 14-10-2018 IPR011053 Single hybrid motif Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 584 598 3.5E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 599 612 3.5E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 567 580 3.5E-18 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 489 637 7.5E-47 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 594 611 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 Pfam PF00364 Biotin-requiring enzyme 564 637 1.9E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 Gene3D G3DSA:2.40.50.100 561 637 8.8E-31 T 14-10-2018 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 Pfam PF00682 HMGL-like 4 269 8.4E-44 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tph_c16380 71b679ecc5540a8083f9ebe8314ab134 641 SUPERFAMILY SSF89000 296 446 6.28E-54 T 14-10-2018 Tph_c07010 9671147c7f29358bc6382ca804382a08 251 SUPERFAMILY SSF52507 14 148 1.57E-6 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c07010 9671147c7f29358bc6382ca804382a08 251 Gene3D G3DSA:3.40.50.1950 6 152 6.2E-6 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c10110 59a17f588fb24a06ec4775fc8fb889f3 58 Pfam PF01783 Ribosomal L32p protein family 3 57 3.5E-24 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10110 59a17f588fb24a06ec4775fc8fb889f3 58 SUPERFAMILY SSF57829 1 55 3.85E-21 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Tph_c10110 59a17f588fb24a06ec4775fc8fb889f3 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.844 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10110 59a17f588fb24a06ec4775fc8fb889f3 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 3 55 2.9E-23 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Gene3D G3DSA:3.30.450.40 172 341 3.2E-22 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Gene3D G3DSA:3.30.450.40 342 504 4.9E-36 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 SMART SM00065 199 338 3.4E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 SMART SM00065 359 506 2.1E-25 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Gene3D G3DSA:1.10.3210.10 505 695 8.4E-68 T 14-10-2018 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Pfam PF01966 HD domain 529 649 1.1E-22 T 14-10-2018 IPR006674 HD domain Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Pfam PF13185 GAF domain 199 329 3.4E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Pfam PF13185 GAF domain 358 497 1.6E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 TIGRFAM TIGR00277 HDIG: HDIG domain 528 617 1.3E-11 T 14-10-2018 IPR006675 HDIG domain Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 SMART SM00471 523 658 5.4E-16 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 SUPERFAMILY SSF55781 325 498 2.62E-31 T 14-10-2018 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 SUPERFAMILY SSF55781 180 349 7.2E-20 T 14-10-2018 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 SUPERFAMILY SSF109604 513 687 1.5E-39 T 14-10-2018 Tph_c08940 09dcd2392d7af8cc24a2a2663e7f74a6 739 Pfam PF10114 Sensory domain found in PocR 18 169 3.4E-35 T 14-10-2018 IPR018771 PocR domain Tph_c12520 6ce6614378d7145f782bfd751380d4a9 143 SUPERFAMILY SSF55021 3 69 1.68E-16 T 14-10-2018 Tph_c12520 6ce6614378d7145f782bfd751380d4a9 143 SUPERFAMILY SSF55021 71 143 2.52E-13 T 14-10-2018 Tph_c12520 6ce6614378d7145f782bfd751380d4a9 143 Pfam PF01842 ACT domain 6 53 1.9E-6 T 14-10-2018 IPR002912 ACT domain Tph_c12520 6ce6614378d7145f782bfd751380d4a9 143 Pfam PF01842 ACT domain 72 125 5.0E-7 T 14-10-2018 IPR002912 ACT domain Tph_c12520 6ce6614378d7145f782bfd751380d4a9 143 Gene3D G3DSA:3.30.2130.10 2 143 6.4E-54 T 14-10-2018 Tph_c16130 b0ac19e8c5f0f4a13f0a6ab7196a9107 184 SUPERFAMILY SSF55811 13 181 2.44E-55 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tph_c16130 b0ac19e8c5f0f4a13f0a6ab7196a9107 184 Gene3D G3DSA:3.90.79.10 9 183 4.8E-60 T 14-10-2018 Tph_c16130 b0ac19e8c5f0f4a13f0a6ab7196a9107 184 ProSitePatterns PS00893 Nudix box signature. 82 103 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Tph_c16130 b0ac19e8c5f0f4a13f0a6ab7196a9107 184 Pfam PF00293 NUDIX domain 48 159 7.5E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Pfam PF14697 4Fe-4S dicluster domain 144 205 9.7E-9 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 78 6.8E-23 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Pfam PF00384 Molybdopterin oxidoreductase 277 352 1.0E-17 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Gene3D G3DSA:2.20.25.90 220 275 5.8E-22 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 85 121 4.5E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 SUPERFAMILY SSF53706 189 351 7.33E-64 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Gene3D G3DSA:3.10.20.740 3 124 1.0E-46 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 SMART SM00929 85 125 3.1E-19 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 SUPERFAMILY SSF54862 77 214 2.26E-42 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 SMART SM00926 220 274 5.5E-21 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 225 242 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 SUPERFAMILY SSF54292 4 76 8.84E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Gene3D G3DSA:3.40.50.740 278 352 2.6E-28 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Gene3D G3DSA:3.30.70.20 127 209 5.9E-26 T 14-10-2018 Tph_c18430 8be9e3907f49fbee423f9fa376101068 352 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 273 1.7E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c09650 e0c5a24c1051fb167e66b4ba524720ba 366 Gene3D G3DSA:3.40.50.11900 226 366 3.6E-44 T 14-10-2018 Tph_c09650 e0c5a24c1051fb167e66b4ba524720ba 366 Gene3D G3DSA:3.40.50.11890 2 131 2.3E-21 T 14-10-2018 Tph_c09650 e0c5a24c1051fb167e66b4ba524720ba 366 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 6 364 6.1E-39 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Tph_c09650 e0c5a24c1051fb167e66b4ba524720ba 366 Gene3D G3DSA:1.20.1270.370 132 196 2.3E-21 T 14-10-2018 Tph_c19580 c081f3ab2a75f0c18eec6b20501dfe25 389 SUPERFAMILY SSF54862 14 112 1.93E-12 T 14-10-2018 Tph_c19580 c081f3ab2a75f0c18eec6b20501dfe25 389 Pfam PF02754 Cysteine-rich domain 152 235 4.1E-12 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c19580 c081f3ab2a75f0c18eec6b20501dfe25 389 Pfam PF02754 Cysteine-rich domain 277 364 4.0E-18 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c19580 c081f3ab2a75f0c18eec6b20501dfe25 389 Gene3D G3DSA:1.10.1060.10 8 104 3.2E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c19580 c081f3ab2a75f0c18eec6b20501dfe25 389 Pfam PF13183 4Fe-4S dicluster domain 17 86 9.3E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c14330 f34094e72f3ae7e3c5b69a9178a6aa94 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 1.4E-14 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c14330 f34094e72f3ae7e3c5b69a9178a6aa94 68 Pfam PF01192 RNA polymerase Rpb6 9 58 8.0E-17 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tph_c14330 f34094e72f3ae7e3c5b69a9178a6aa94 68 SUPERFAMILY SSF63562 1 62 3.14E-19 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tph_c14330 f34094e72f3ae7e3c5b69a9178a6aa94 68 Gene3D G3DSA:3.90.940.10 1 68 2.8E-17 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tph_c14330 f34094e72f3ae7e3c5b69a9178a6aa94 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.993 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c14330 f34094e72f3ae7e3c5b69a9178a6aa94 68 SMART SM01409 8 60 8.7E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Tph_c18840 9f54a21f73c64409cc53c67d6adeefae 79 SUPERFAMILY SSF50037 9 76 2.23E-17 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Tph_c18840 9f54a21f73c64409cc53c67d6adeefae 79 Gene3D G3DSA:2.30.30.90 4 79 2.8E-21 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain Tph_c18840 9f54a21f73c64409cc53c67d6adeefae 79 SMART SM00899 6 78 6.3E-18 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Tph_c18840 9f54a21f73c64409cc53c67d6adeefae 79 Pfam PF04023 FeoA domain 7 76 1.1E-14 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 Tph_c15800 4dbc0fc7eca5976004f22db9165b3e97 431 Pfam PF00005 ABC transporter 20 169 1.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c15800 4dbc0fc7eca5976004f22db9165b3e97 431 SUPERFAMILY SSF52540 4 230 4.74E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15800 4dbc0fc7eca5976004f22db9165b3e97 431 Gene3D G3DSA:3.40.50.300 2 258 1.3E-70 T 14-10-2018 Tph_c15800 4dbc0fc7eca5976004f22db9165b3e97 431 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c15800 4dbc0fc7eca5976004f22db9165b3e97 431 SMART SM00382 29 218 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c15800 4dbc0fc7eca5976004f22db9165b3e97 431 ProDom PD064925 ATP-BINDING ABC NUCLEOTIDE-BINDING MEMBRANE TRANSPORTER IRON TRANSPORTER COMPOUND ATPASE III 299 362 9.0E-11 T 14-10-2018 IPR020322 Uncharacterised domain MJ0874 Tph_c04450 e743750a4fb8de77a7df69dd9c28501a 269 SUPERFAMILY SSF53335 61 228 3.31E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c04450 e743750a4fb8de77a7df69dd9c28501a 269 Pfam PF13847 Methyltransferase domain 75 214 1.9E-31 T 14-10-2018 IPR025714 Methyltransferase domain Tph_c04450 e743750a4fb8de77a7df69dd9c28501a 269 Gene3D G3DSA:3.40.50.150 44 252 1.4E-57 T 14-10-2018 Tph_c11170 dfa136a84484350f33e3c1ebbb094817 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 184 8.2E-70 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Tph_c11170 dfa136a84484350f33e3c1ebbb094817 185 Gene3D G3DSA:3.30.1360.40 31 105 1.1E-69 T 14-10-2018 Tph_c11170 dfa136a84484350f33e3c1ebbb094817 185 SUPERFAMILY SSF55194 3 184 1.14E-69 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Tph_c11170 dfa136a84484350f33e3c1ebbb094817 185 Gene3D G3DSA:1.10.132.20 12 182 1.1E-69 T 14-10-2018 Tph_c11170 dfa136a84484350f33e3c1ebbb094817 185 Pfam PF01765 Ribosome recycling factor 21 183 1.2E-63 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Tph_c11170 dfa136a84484350f33e3c1ebbb094817 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.137 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 SUPERFAMILY SSF48557 87 540 6.91E-154 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 Hamap MF_00006 Argininosuccinate lyase [argH]. 86 538 44.213 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 Gene3D G3DSA:1.10.40.30 445 517 8.9E-195 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 Gene3D G3DSA:1.10.275.10 109 314 8.9E-195 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 Pfam PF00206 Lyase 91 385 6.3E-83 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 ProSitePatterns PS00163 Fumarate lyases signature. 360 369 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00149 Fumarate lyase superfamily signature 187 205 6.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00149 Fumarate lyase superfamily signature 232 250 6.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00149 Fumarate lyase superfamily signature 316 343 6.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00149 Fumarate lyase superfamily signature 360 376 6.9E-30 T 14-10-2018 IPR000362 Fumarate lyase family Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 Pfam PF14698 Argininosuccinate lyase C-terminal 448 516 6.1E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 Gene3D G3DSA:1.20.200.10 204 533 8.9E-195 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00145 Argininosuccinate lyase family signature 186 208 4.2E-67 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00145 Argininosuccinate lyase family signature 316 340 4.2E-67 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00145 Argininosuccinate lyase family signature 227 247 4.2E-67 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00145 Argininosuccinate lyase family signature 360 376 4.2E-67 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00145 Argininosuccinate lyase family signature 278 294 4.2E-67 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 PRINTS PR00145 Argininosuccinate lyase family signature 395 414 4.2E-67 T 14-10-2018 Tph_c25420 340dbbd6fa8ec8fa9709d270eb517c0f 548 TIGRFAM TIGR00838 argH: argininosuccinate lyase 87 537 2.5E-195 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c14350 7f487ae07f108e94b51b03372fc8cf49 88 Pfam PF04025 Domain of unknown function (DUF370) 5 77 1.1E-38 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tph_c14350 7f487ae07f108e94b51b03372fc8cf49 88 Hamap MF_01503 UPF0296 protein . 3 88 29.843 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tph_c14350 7f487ae07f108e94b51b03372fc8cf49 88 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 2.0E-34 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00941 Cadmium-transporting ATPase signature 43 64 2.1E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00941 Cadmium-transporting ATPase signature 208 228 2.1E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00941 Cadmium-transporting ATPase signature 289 305 2.1E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00941 Cadmium-transporting ATPase signature 308 322 2.1E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00941 Cadmium-transporting ATPase signature 32 41 2.1E-8 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 427 433 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 174 721 6.3E-169 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 174 722 3.8E-155 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 SUPERFAMILY SSF81653 226 323 7.59E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 Gene3D G3DSA:3.40.50.1000 406 672 1.2E-77 T 14-10-2018 IPR023214 HAD superfamily Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 SUPERFAMILY SSF55008 28 98 2.36E-6 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 Pfam PF00122 E1-E2 ATPase 224 404 3.0E-50 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 Gene3D G3DSA:3.40.1110.10 436 547 1.2E-77 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 SUPERFAMILY SSF81665 174 713 1.7E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 573 5.2E-21 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 655 5.2E-21 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 425 439 5.2E-21 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 638 5.2E-21 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 273 287 5.2E-21 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 196 700 5.9E-75 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 SUPERFAMILY SSF56784 423 719 2.02E-59 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 Gene3D G3DSA:2.70.150.20 210 327 1.4E-30 T 14-10-2018 Tph_c14520 59893547d2298d95d28fe0a24af25d99 728 Pfam PF00702 haloacid dehalogenase-like hydrolase 421 633 2.6E-36 T 14-10-2018 Tph_c06830 24b4bee7f152f1c61bc81cd848390c38 342 Gene3D G3DSA:3.90.1200.10 116 322 3.0E-60 T 14-10-2018 Tph_c06830 24b4bee7f152f1c61bc81cd848390c38 342 Gene3D G3DSA:3.30.200.20 20 113 2.8E-17 T 14-10-2018 Tph_c06830 24b4bee7f152f1c61bc81cd848390c38 342 SUPERFAMILY SSF56112 25 307 1.2E-49 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c06830 24b4bee7f152f1c61bc81cd848390c38 342 Pfam PF01633 Choline/ethanolamine kinase 61 246 4.4E-25 T 14-10-2018 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 SUPERFAMILY SSF110849 4 93 1.92E-15 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Tph_c23260 d819b3b352023c1fc522d5394f253659 432 Pfam PF02195 ParB-like nuclease domain 5 92 6.5E-11 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c23260 d819b3b352023c1fc522d5394f253659 432 Gene3D G3DSA:3.40.50.150 163 430 4.3E-44 T 14-10-2018 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 Pfam PF01555 DNA methylase 194 417 4.0E-27 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 SMART SM00470 4 93 3.4E-9 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c23260 d819b3b352023c1fc522d5394f253659 432 SUPERFAMILY SSF53335 161 420 8.24E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c23260 d819b3b352023c1fc522d5394f253659 432 Gene3D G3DSA:3.90.1530.10 1 91 4.5E-5 T 14-10-2018 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 377 395 6.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 358 375 6.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 192 206 6.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 400 420 6.7E-17 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23260 d819b3b352023c1fc522d5394f253659 432 PIRSF PIRSF036758 1 432 1.5E-94 T 14-10-2018 IPR015840 DNA methyase, ParB domain-containing Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Gene3D G3DSA:3.30.70.1450 138 224 3.7E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 SUPERFAMILY SSF51735 1 149 6.57E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 SUPERFAMILY SSF116726 360 444 1.57E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.3E-14 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.3E-14 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.3E-14 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.3E-14 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Pfam PF02080 TrkA-C domain 154 220 4.8E-11 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Pfam PF02080 TrkA-C domain 376 444 2.2E-16 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Gene3D G3DSA:3.40.50.720 2 137 2.8E-48 T 14-10-2018 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Gene3D G3DSA:3.30.70.1450 363 446 4.3E-22 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Pfam PF02254 TrkA-N domain 3 122 2.0E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Pfam PF02254 TrkA-N domain 230 346 1.2E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 SUPERFAMILY SSF51735 229 370 2.21E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 Gene3D G3DSA:3.40.50.720 229 362 5.3E-41 T 14-10-2018 Tph_c28850 321c471bb162fe8b804bb9143b2ece99 452 SUPERFAMILY SSF116726 135 220 3.01E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 SUPERFAMILY SSF111304 3 199 3.66E-76 T 14-10-2018 IPR023627 Recombination protein RecR Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 Gene3D G3DSA:1.10.8.420 2 54 2.9E-21 T 14-10-2018 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 Gene3D G3DSA:3.40.1360.10 78 199 1.9E-45 T 14-10-2018 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 SMART SM00278 13 32 0.0018 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 SMART SM00493 81 166 5.7E-15 T 14-10-2018 IPR006171 TOPRIM domain Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 TIGRFAM TIGR00615 recR: recombination protein RecR 4 197 4.3E-79 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 108.341 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 Pfam PF02132 RecR protein 40 79 6.7E-17 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Tph_c28990 a91a01efc149baec95441e7f31d63c6b 199 Pfam PF13662 Toprim domain 82 172 3.4E-24 T 14-10-2018 IPR006171 TOPRIM domain Tph_c08640 00750b527b897c2918179b65f2f1d1e3 77 Gene3D G3DSA:3.60.110.10 1 64 5.3E-12 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c08640 00750b527b897c2918179b65f2f1d1e3 77 SUPERFAMILY SSF56317 2 54 1.26E-9 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c24380 97c73ff08cf8078a8838058fbc623924 87 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 74 6.2E-10 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tph_c24380 97c73ff08cf8078a8838058fbc623924 87 SUPERFAMILY SSF143430 1 78 1.31E-23 T 14-10-2018 Tph_c24380 97c73ff08cf8078a8838058fbc623924 87 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 79 13.496 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tph_c24380 97c73ff08cf8078a8838058fbc623924 87 Pfam PF09827 CRISPR associated protein Cas2 1 72 2.1E-19 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Tph_c24380 97c73ff08cf8078a8838058fbc623924 87 Gene3D G3DSA:3.30.70.240 1 66 1.2E-27 T 14-10-2018 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 5 154 8.0E-43 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 PIRSF PIRSF000368 1 167 7.4E-53 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 Pfam PF13353 4Fe-4S single cluster domain 14 151 7.2E-40 T 14-10-2018 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 Gene3D G3DSA:3.20.20.70 1 165 3.1E-40 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 Pfam PF04055 Radical SAM superfamily 22 108 8.9E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c12790 9c9cd9c304ae66e258cb3bca1204b954 167 SUPERFAMILY SSF102114 21 105 7.85E-14 T 14-10-2018 Tph_c21490 ca1a0100a97044cd5b73216959f06571 625 Pfam PF06439 Domain of Unknown Function (DUF1080) 62 209 1.5E-6 T 14-10-2018 IPR010496 Domain of unknown function DUF1080 Tph_c21490 ca1a0100a97044cd5b73216959f06571 625 Gene3D G3DSA:2.60.120.200 38 240 2.5E-15 T 14-10-2018 Tph_c21490 ca1a0100a97044cd5b73216959f06571 625 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 418 482 9.1E-22 T 14-10-2018 Tph_c21490 ca1a0100a97044cd5b73216959f06571 625 SUPERFAMILY SSF49899 36 238 6.75E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Tph_c12630 ca576044f989e46f2ac42eb063ddaae2 365 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 8 361 4.6E-127 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12630 ca576044f989e46f2ac42eb063ddaae2 365 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 8 360 2.1E-142 T 14-10-2018 IPR013438 Sporulation stage V, protein E Tph_c12630 ca576044f989e46f2ac42eb063ddaae2 365 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 8 360 5.5E-103 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12630 ca576044f989e46f2ac42eb063ddaae2 365 Pfam PF01098 Cell cycle protein 11 363 7.6E-120 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Pfam PF02938 GAD domain 318 411 1.3E-21 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 8 588 8.6E-235 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Pfam PF00152 tRNA synthetases class II (D, K and N) 128 564 5.6E-106 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 8 590 34.119 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Pfam PF01336 OB-fold nucleic acid binding domain 25 110 1.0E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 PRINTS PR01042 Aspartyl-tRNA synthetase signature 524 538 2.4E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 PRINTS PR01042 Aspartyl-tRNA synthetase signature 480 496 2.4E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 PRINTS PR01042 Aspartyl-tRNA synthetase signature 217 230 2.4E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 PRINTS PR01042 Aspartyl-tRNA synthetase signature 200 212 2.4E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Gene3D G3DSA:2.40.50.140 2 112 3.9E-34 T 14-10-2018 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 SUPERFAMILY SSF55681 117 590 7.26E-106 T 14-10-2018 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 SUPERFAMILY SSF50249 9 113 1.18E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Gene3D G3DSA:3.30.1360.30 282 425 3.2E-189 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 SUPERFAMILY SSF55261 299 425 5.07E-34 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Tph_c12500 9fffe9da5dcccad4351bab5f3dcf28f6 606 Gene3D G3DSA:3.30.930.10 126 588 3.2E-189 T 14-10-2018 Tph_c20770 32da23c4d71c7a2f709ba17bb03402df 158 Gene3D G3DSA:3.60.21.10 1 158 3.5E-33 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c20770 32da23c4d71c7a2f709ba17bb03402df 158 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 33 115 8.7E-6 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA Tph_c20770 32da23c4d71c7a2f709ba17bb03402df 158 SUPERFAMILY SSF56300 8 157 1.82E-24 T 14-10-2018 Tph_c20770 32da23c4d71c7a2f709ba17bb03402df 158 PRINTS PR01607 Apyrase family signature 120 140 4.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tph_c20770 32da23c4d71c7a2f709ba17bb03402df 158 PRINTS PR01607 Apyrase family signature 88 111 4.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tph_c20770 32da23c4d71c7a2f709ba17bb03402df 158 PRINTS PR01607 Apyrase family signature 60 77 4.7E-9 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 Tph_c28130 e8135795ccc031cb18eddcf85d45f54e 321 SUPERFAMILY SSF56281 60 236 1.74E-15 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c28130 e8135795ccc031cb18eddcf85d45f54e 321 Gene3D G3DSA:3.60.15.10 56 314 1.4E-12 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c24620 ad63fc662565afb228c54a438e948e95 152 SUPERFAMILY SSF55298 1 151 4.24E-56 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tph_c24620 ad63fc662565afb228c54a438e948e95 152 Gene3D G3DSA:3.30.1330.40 1 151 2.0E-62 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Tph_c24620 ad63fc662565afb228c54a438e948e95 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 151 4.0E-31 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Tph_c25510 c0e32f9de6f96f72de0bd4ed854f7f4e 466 Gene3D G3DSA:3.40.50.12780 38 367 2.3E-78 T 14-10-2018 Tph_c25510 c0e32f9de6f96f72de0bd4ed854f7f4e 466 SUPERFAMILY SSF56801 99 455 2.98E-16 T 14-10-2018 Tph_c21660 d417735864ee6448c77d7d974162a07b 179 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 126 144 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21660 d417735864ee6448c77d7d974162a07b 179 Gene3D G3DSA:1.10.10.1590 19 86 1.2E-14 T 14-10-2018 Tph_c21660 d417735864ee6448c77d7d974162a07b 179 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 26 168 2.7E-50 T 14-10-2018 Tph_c21660 d417735864ee6448c77d7d974162a07b 179 PIRSF PIRSF000216 4 179 5.0E-53 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21660 d417735864ee6448c77d7d974162a07b 179 Gene3D G3DSA:3.40.30.10 87 178 8.0E-29 T 14-10-2018 Tph_c21660 d417735864ee6448c77d7d974162a07b 179 SUPERFAMILY SSF52833 21 175 7.01E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c24370 aa19b955bd3135fd5a7d070883cbe5f4 245 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 51 243 3.6E-44 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tph_c24370 aa19b955bd3135fd5a7d070883cbe5f4 245 PIRSF PIRSF005054 1 245 2.3E-69 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tph_c24370 aa19b955bd3135fd5a7d070883cbe5f4 245 Pfam PF01881 CRISPR associated protein Cas6 96 244 1.6E-40 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tph_c24370 aa19b955bd3135fd5a7d070883cbe5f4 245 Gene3D G3DSA:3.30.70.1900 127 245 6.1E-36 T 14-10-2018 Tph_c24370 aa19b955bd3135fd5a7d070883cbe5f4 245 Gene3D G3DSA:3.30.70.1890 1 122 1.2E-17 T 14-10-2018 Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 1.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 SMART SM00862 150 224 5.9E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 Gene3D G3DSA:3.40.50.2300 1 121 6.7E-40 T 14-10-2018 Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 Gene3D G3DSA:1.10.10.10 122 226 6.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 SUPERFAMILY SSF46894 126 225 1.56E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 SUPERFAMILY SSF52172 3 122 6.55E-43 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 Pfam PF00072 Response regulator receiver domain 7 115 1.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c01870 f5631b26b07262df8a899fa9bffdf365 226 SMART SM00448 5 115 4.2E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 431 8.8E-170 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 SUPERFAMILY SSF52540 137 435 1.22E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Hamap MF_00195 GTPase Der [der]. 3 434 39.965 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 SMART SM00382 2 165 2.9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 SMART SM00382 172 315 0.016 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 176 196 1.2E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 225 240 1.2E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Pfam PF01926 50S ribosome-binding GTPase 175 293 2.5E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Pfam PF01926 50S ribosome-binding GTPase 6 120 3.8E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Gene3D G3DSA:3.30.300.20 351 434 5.0E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 PIRSF PIRSF006485 2 439 1.2E-168 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 156 9.9E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 173 341 9.6E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Gene3D G3DSA:3.40.50.300 168 349 1.0E-53 T 14-10-2018 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Gene3D G3DSA:3.40.50.300 1 161 7.8E-47 T 14-10-2018 Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 SUPERFAMILY SSF52540 4 169 1.45E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15600 dd6d478b080ebe06655bede3dd413524 439 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 431 3.6E-32 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Tph_c20790 a6ce9587f778bbad4e68c93e0571afa4 446 Gene3D G3DSA:1.20.120.1760 241 443 1.2E-50 T 14-10-2018 Tph_c20790 a6ce9587f778bbad4e68c93e0571afa4 446 SUPERFAMILY SSF53448 1 238 2.19E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c20790 a6ce9587f778bbad4e68c93e0571afa4 446 Pfam PF12804 MobA-like NTP transferase domain 3 129 1.7E-19 T 14-10-2018 IPR025877 MobA-like NTP transferase Tph_c20790 a6ce9587f778bbad4e68c93e0571afa4 446 Pfam PF01066 CDP-alcohol phosphatidyltransferase 270 332 8.2E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tph_c20790 a6ce9587f778bbad4e68c93e0571afa4 446 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 310 332 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tph_c20790 a6ce9587f778bbad4e68c93e0571afa4 446 Gene3D G3DSA:3.90.550.10 1 240 4.3E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c05190 d9d4879d777ed5500eac7dc591670078 110 Pfam PF02553 Cobalt transport protein component CbiN 5 71 1.0E-31 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Tph_c05190 d9d4879d777ed5500eac7dc591670078 110 TIGRFAM TIGR01165 cbiN: cobalt transport protein 3 86 4.6E-33 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Tph_c05190 d9d4879d777ed5500eac7dc591670078 110 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 110 44.838 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 SUPERFAMILY SSF54791 206 301 1.84E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 Hamap MF_00335 Ribonuclease Y [rny]. 10 518 25.919 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 Pfam PF00013 KH domain 211 260 2.7E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 SUPERFAMILY SSF109604 316 470 4.71E-33 T 14-10-2018 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 Gene3D G3DSA:3.30.1370.10 209 311 4.6E-9 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 Pfam PF01966 HD domain 335 426 1.8E-19 T 14-10-2018 IPR006674 HD domain Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 Pfam PF12072 Domain of unknown function (DUF3552) 11 202 3.2E-66 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 TIGRFAM TIGR00277 HDIG: HDIG domain 330 407 9.2E-25 T 14-10-2018 IPR006675 HDIG domain Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 13 518 8.2E-239 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 SMART SM00471 330 436 1.1E-14 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 Gene3D G3DSA:1.10.3210.10 316 470 7.6E-21 T 14-10-2018 Tph_c11590 8c786b7aaf9a34f0756c3c22c7094d4e 518 SMART SM00322 206 273 1.4E-7 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 PRINTS PR00762 Chloride channel signature 177 196 5.9E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 PRINTS PR00762 Chloride channel signature 396 415 5.9E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 PRINTS PR00762 Chloride channel signature 343 363 5.9E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 PRINTS PR00762 Chloride channel signature 378 394 5.9E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 PRINTS PR00762 Chloride channel signature 126 145 5.9E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 Gene3D G3DSA:3.10.580.10 454 584 2.6E-25 T 14-10-2018 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 SUPERFAMILY SSF81340 6 440 2.09E-103 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 SMART SM00116 467 517 0.001 T 14-10-2018 IPR000644 CBS domain Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 SMART SM00116 532 579 4.1E-7 T 14-10-2018 IPR000644 CBS domain Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 Pfam PF00654 Voltage gated chloride channel 83 427 1.2E-90 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 Gene3D G3DSA:1.10.3080.10 17 447 8.1E-102 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 SUPERFAMILY SSF54631 451 578 2.65E-27 T 14-10-2018 Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 Pfam PF00571 CBS domain 525 577 1.2E-10 T 14-10-2018 IPR000644 CBS domain Tph_c04440 ef30f3333aee02fba9fd497aaae1e540 587 Pfam PF00571 CBS domain 460 515 2.6E-7 T 14-10-2018 IPR000644 CBS domain Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 SUPERFAMILY SSF55874 346 516 9.04E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 SUPERFAMILY SSF47384 273 357 1.94E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 Gene3D G3DSA:1.10.287.130 296 357 6.2E-16 T 14-10-2018 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 Gene3D G3DSA:3.30.565.10 371 519 2.6E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 SMART SM00388 290 357 4.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 Gene3D G3DSA:1.20.1480.50 200 295 2.7E-12 T 14-10-2018 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 356 9.0E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 SMART SM00387 403 515 9.9E-42 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 454 1.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 468 1.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 493 1.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 512 1.1E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 SMART SM00304 237 289 2.2E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 SUPERFAMILY SSF158472 241 286 3.92E-9 T 14-10-2018 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 Pfam PF00672 HAMP domain 241 285 2.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c02420 77b2b7b022292ea6f1f6f9814c9b8d6c 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 408 514 1.2E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c09150 e418618409ea723031dc8a41f32d7bbe 546 Pfam PF09210 Domain of unknown function (DUF1957) 425 525 1.1E-42 T 14-10-2018 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Tph_c09150 e418618409ea723031dc8a41f32d7bbe 546 Pfam PF03065 Glycosyl hydrolase family 57 7 362 7.1E-51 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Tph_c09150 e418618409ea723031dc8a41f32d7bbe 546 SUPERFAMILY SSF88688 419 527 9.48E-43 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily Tph_c09150 e418618409ea723031dc8a41f32d7bbe 546 SUPERFAMILY SSF88713 3 414 3.46E-116 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tph_c09150 e418618409ea723031dc8a41f32d7bbe 546 Gene3D G3DSA:3.20.110.10 2 407 2.6E-162 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily Tph_c09150 e418618409ea723031dc8a41f32d7bbe 546 Gene3D G3DSA:1.20.1430.10 415 543 5.0E-45 T 14-10-2018 IPR037090 Glycoside hydrolase families 57, central domain KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 SUPERFAMILY SSF55890 82 167 1.96E-16 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 79 137 1.3E-16 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 Gene3D G3DSA:3.30.565.10 135 279 2.7E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 SUPERFAMILY SSF55874 146 280 9.17E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 Gene3D G3DSA:1.10.287.130 70 134 1.0E-8 T 14-10-2018 Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 SMART SM00387 174 283 1.5E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 280 5.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 PRINTS PR00344 Bacterial sensor protein C-terminal signature 232 242 5.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 PRINTS PR00344 Bacterial sensor protein C-terminal signature 243 261 5.5E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c17390 15a7b883fe28840ce5b1d8089f44d024 285 Pfam PF14501 GHKL domain 175 265 2.3E-15 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 Pfam PF13408 Recombinase zinc beta ribbon domain 286 349 3.9E-11 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 Gene3D G3DSA:3.40.50.1390 1 132 6.0E-34 T 14-10-2018 Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 Gene3D G3DSA:1.10.10.2600 134 274 2.5E-17 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 Pfam PF07508 Recombinase 172 271 5.2E-19 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 SMART SM00857 3 150 7.9E-52 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 Pfam PF00239 Resolvase, N terminal domain 3 149 1.4E-37 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 SUPERFAMILY SSF53041 1 148 4.32E-34 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c16790 62d099255db727bdf7431bfa284cff6a 517 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Tph_c17240 0d02177dcb9d688c3e99133a58d4982b 303 Pfam PF14236 Domain of unknown function (DUF4338) 68 289 2.9E-53 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 Tph_c13960 0d02177dcb9d688c3e99133a58d4982b 303 Pfam PF14236 Domain of unknown function (DUF4338) 68 289 2.9E-53 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 Tph_c00420 90cb367db94c1abd0739c8313465b8b6 203 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 46 185 2.6E-58 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 Tph_c00420 90cb367db94c1abd0739c8313465b8b6 203 SUPERFAMILY SSF53163 11 196 8.24E-47 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c00420 90cb367db94c1abd0739c8313465b8b6 203 Pfam PF06866 Protein of unknown function (DUF1256) 19 183 1.1E-53 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 Tph_c07310 aa4ff8de3046c075d38b4e9b29cf04e3 271 Pfam PF13614 AAA domain 37 188 5.1E-7 T 14-10-2018 IPR025669 AAA domain Tph_c07310 aa4ff8de3046c075d38b4e9b29cf04e3 271 SUPERFAMILY SSF52540 28 268 6.88E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c07310 aa4ff8de3046c075d38b4e9b29cf04e3 271 Gene3D G3DSA:3.40.50.300 28 271 3.9E-19 T 14-10-2018 Tph_c11330 0248ec669f9746c10a7aef0bc368b0d8 331 Pfam PF02272 DHHA1 domain 235 313 5.2E-12 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tph_c11330 0248ec669f9746c10a7aef0bc368b0d8 331 Gene3D G3DSA:3.90.1640.10 3 205 5.1E-60 T 14-10-2018 Tph_c11330 0248ec669f9746c10a7aef0bc368b0d8 331 Pfam PF01368 DHH family 16 158 1.5E-10 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c11330 0248ec669f9746c10a7aef0bc368b0d8 331 Gene3D G3DSA:3.10.310.30 206 324 7.4E-37 T 14-10-2018 Tph_c11330 0248ec669f9746c10a7aef0bc368b0d8 331 SUPERFAMILY SSF64182 16 291 3.27E-60 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tph_c27180 143dba1580d673bbab030d4f401c4b22 346 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 185 197 2.9E-7 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Tph_c27180 143dba1580d673bbab030d4f401c4b22 346 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 168 182 2.9E-7 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Tph_c27180 143dba1580d673bbab030d4f401c4b22 346 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 107 121 2.9E-7 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Tph_c27180 143dba1580d673bbab030d4f401c4b22 346 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 277 296 2.9E-7 T 14-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD Tph_c27180 143dba1580d673bbab030d4f401c4b22 346 Pfam PF12679 ABC-2 family transporter protein 9 272 3.1E-11 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 185 3.0E-74 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-6 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-6 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Gene3D G3DSA:1.20.970.10 199 275 1.9E-26 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.4E-34 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00097 Anthranilate synthase component II signature 74 85 4.4E-34 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00097 Anthranilate synthase component II signature 47 56 4.4E-34 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00097 Anthranilate synthase component II signature 119 131 4.4E-34 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00097 Anthranilate synthase component II signature 99 107 4.4E-34 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.4E-34 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Pfam PF00591 Glycosyl transferase family, a/b domain 280 530 2.8E-100 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Pfam PF02885 Glycosyl transferase family, helical bundle domain 211 272 3.9E-20 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 211 539 40.726 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Gene3D G3DSA:3.40.50.880 1 189 1.2E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Pfam PF00117 Glutamine amidotransferase class-I 4 186 2.8E-52 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 Gene3D G3DSA:3.40.1030.10 276 544 5.6E-115 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 SUPERFAMILY SSF52317 2 188 1.6E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 214 538 2.6E-133 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 SUPERFAMILY SSF52418 281 541 1.44E-99 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 SUPERFAMILY SSF47648 207 275 1.96E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.7E-13 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.7E-13 T 14-10-2018 Tph_c26530 d4e38dc181a3b522b966a380f68a16a1 544 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.7E-13 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 SUPERFAMILY SSF64307 583 653 6.8E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Gene3D G3DSA:3.30.110.40 581 655 9.2E-26 T 14-10-2018 IPR036868 TusA-like domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 SUPERFAMILY SSF55424 326 448 2.92E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 ProSitePatterns PS00380 Rhodanese signature 1. 481 492 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Gene3D G3DSA:3.50.50.60 4 343 2.6E-184 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 435 1.5E-11 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Gene3D G3DSA:3.40.1260.10 671 828 1.3E-65 T 14-10-2018 IPR027396 DsrEFH-like Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Pfam PF13686 DsrE/DsrF/DrsH-like family 675 827 8.7E-58 T 14-10-2018 IPR032836 DsrE2-like family Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 SUPERFAMILY SSF75169 677 824 5.59E-21 T 14-10-2018 IPR027396 DsrEFH-like Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Pfam PF01206 Sulfurtransferase TusA 585 653 4.7E-19 T 14-10-2018 IPR001455 TusA-like domain Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 SUPERFAMILY SSF51905 2 320 2.3E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 310 2.6E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 SMART SM00450 454 551 1.8E-25 T 14-10-2018 IPR001763 Rhodanese-like domain Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 1.4E-23 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.4E-23 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.4E-23 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 1.4E-23 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.4E-23 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 SUPERFAMILY SSF52821 435 546 7.2E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Gene3D G3DSA:3.50.50.60 115 443 2.6E-184 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 4.9E-16 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 4.9E-16 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 390 405 4.9E-16 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 4.9E-16 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 280 287 4.9E-16 T 14-10-2018 Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Gene3D G3DSA:3.40.250.10 464 580 4.8E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 Pfam PF00581 Rhodanese-like domain 465 543 2.8E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Tph_c17700 01c48ffe682368712ae048935dc8be7d 828 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 586 610 - T 14-10-2018 IPR001455 TusA-like domain Tph_c19420 63156d945f2ff097b3239b9e0ca07ec2 97 SUPERFAMILY SSF47598 21 56 1.91E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 Tph_c19420 63156d945f2ff097b3239b9e0ca07ec2 97 Gene3D G3DSA:1.10.1220.10 15 95 9.2E-7 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Tph_c19420 63156d945f2ff097b3239b9e0ca07ec2 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 23 57 7.0E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 Tph_c05290 cf4fd36c78e59da69a4fe8e9701ec10a 347 Gene3D G3DSA:3.40.50.1400 2 125 3.8E-32 T 14-10-2018 Tph_c05290 cf4fd36c78e59da69a4fe8e9701ec10a 347 Pfam PF02570 Precorrin-8X methylmutase 143 339 3.6E-67 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Tph_c05290 cf4fd36c78e59da69a4fe8e9701ec10a 347 Gene3D G3DSA:3.40.50.10230 138 346 2.6E-70 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Tph_c05290 cf4fd36c78e59da69a4fe8e9701ec10a 347 SUPERFAMILY SSF63965 155 343 1.7E-62 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Tph_c05290 cf4fd36c78e59da69a4fe8e9701ec10a 347 Pfam PF01903 CbiX 12 115 4.5E-25 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Tph_c05290 cf4fd36c78e59da69a4fe8e9701ec10a 347 SUPERFAMILY SSF53800 5 122 3.53E-28 T 14-10-2018 Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 SUPERFAMILY SSF89447 1 52 1.44E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 50 6.4E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 PIRSF PIRSF026579 1 186 1.6E-93 T 14-10-2018 IPR014213 Sporulation stage V, protein T Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 Gene3D G3DSA:2.10.260.10 1 49 4.7E-24 T 14-10-2018 Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 185 3.6E-51 T 14-10-2018 IPR039472 Sporulation stage V protein T, GAF domain Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 5.5E-15 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 SUPERFAMILY SSF55781 83 185 3.93E-11 T 14-10-2018 Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 SMART SM00966 8 52 5.5E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 Gene3D G3DSA:3.30.450.40 56 186 1.3E-43 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c28250 c9836183d8a4178f71c20297e4afa262 186 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 185 8.2E-92 T 14-10-2018 IPR014213 Sporulation stage V, protein T Tph_c11630 16f1d7316dd71ec0b1a19aa656b84e0b 311 ProSitePatterns PS00869 Renal dipeptidase active site. 102 124 - T 14-10-2018 IPR000180 Membrane dipeptidase, active site GO:0006508|GO:0008235|GO:0008239|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Tph_c11630 16f1d7316dd71ec0b1a19aa656b84e0b 311 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 308 5.8E-90 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 Tph_c11630 16f1d7316dd71ec0b1a19aa656b84e0b 311 Gene3D G3DSA:3.20.20.140 1 311 6.0E-99 T 14-10-2018 Tph_c11630 16f1d7316dd71ec0b1a19aa656b84e0b 311 SUPERFAMILY SSF51556 1 310 1.97E-80 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c15020 77726621fb47cf6d02f9791d7c4e6c97 368 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 363 5.2E-112 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tph_c15020 77726621fb47cf6d02f9791d7c4e6c97 368 Pfam PF00155 Aminotransferase class I and II 35 360 2.3E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tph_c15020 77726621fb47cf6d02f9791d7c4e6c97 368 SUPERFAMILY SSF53383 15 365 3.59E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c15020 77726621fb47cf6d02f9791d7c4e6c97 368 Gene3D G3DSA:3.90.1150.10 25 358 1.4E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c15020 77726621fb47cf6d02f9791d7c4e6c97 368 Gene3D G3DSA:3.40.640.10 48 272 1.4E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c15020 77726621fb47cf6d02f9791d7c4e6c97 368 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 364 61.323 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Tph_c26400 c68ae7055f332f66838a5642c9360c4e 273 SUPERFAMILY SSF53850 44 268 4.99E-71 T 14-10-2018 Tph_c26400 c68ae7055f332f66838a5642c9360c4e 273 Pfam PF13531 Bacterial extracellular solute-binding protein 48 268 6.8E-53 T 14-10-2018 Tph_c26400 c68ae7055f332f66838a5642c9360c4e 273 Gene3D G3DSA:3.40.190.10 48 268 5.5E-81 T 14-10-2018 Tph_c26400 c68ae7055f332f66838a5642c9360c4e 273 PIRSF PIRSF004846 6 271 4.1E-84 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Tph_c26400 c68ae7055f332f66838a5642c9360c4e 273 Gene3D G3DSA:3.40.190.10 125 231 5.5E-81 T 14-10-2018 Tph_c26400 c68ae7055f332f66838a5642c9360c4e 273 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 51 267 3.3E-68 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Tph_c26730 a98a44cc91f2b251de6ee34b468a6fa2 288 Gene3D G3DSA:1.10.1040.20 167 269 6.8E-27 T 14-10-2018 IPR037108 TM1727-like, C-terminal domain superfamily Tph_c26730 a98a44cc91f2b251de6ee34b468a6fa2 288 Pfam PF10727 Rossmann-like domain 3 118 1.3E-25 T 14-10-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain Tph_c26730 a98a44cc91f2b251de6ee34b468a6fa2 288 Gene3D G3DSA:3.40.50.720 2 166 3.8E-46 T 14-10-2018 Tph_c26730 a98a44cc91f2b251de6ee34b468a6fa2 288 SUPERFAMILY SSF51735 4 166 7.03E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c26730 a98a44cc91f2b251de6ee34b468a6fa2 288 Pfam PF10728 Domain of unknown function (DUF2520) 136 261 7.9E-38 T 14-10-2018 IPR018931 Domain of unknown function DUF2520 Tph_c26730 a98a44cc91f2b251de6ee34b468a6fa2 288 SUPERFAMILY SSF48179 168 271 1.46E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c25840 cec8763535b0c999aacbe4c50c80908a 209 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 8.5E-78 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25840 cec8763535b0c999aacbe4c50c80908a 209 Gene3D G3DSA:3.40.1370.10 2 209 1.1E-82 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25840 cec8763535b0c999aacbe4c50c80908a 209 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.0 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25840 cec8763535b0c999aacbe4c50c80908a 209 SUPERFAMILY SSF52166 1 206 1.7E-79 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25840 cec8763535b0c999aacbe4c50c80908a 209 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 4.5E-72 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 Pfam PF01926 50S ribosome-binding GTPase 5 114 2.1E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 Gene3D G3DSA:1.10.150.300 106 192 8.1E-131 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 PIRSF PIRSF006641 1 357 7.4E-111 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 356 1.1E-110 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 Gene3D G3DSA:3.10.20.30 47 355 8.1E-131 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 SUPERFAMILY SSF81271 273 357 6.32E-33 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 80 98 7.9E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 7.9E-12 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 Pfam PF06071 Protein of unknown function (DUF933) 273 356 1.5E-37 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 SUPERFAMILY SSF52540 3 295 3.43E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 357 40.518 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Tph_c18610 5366bd9c7661866a5ddda79d863b7607 357 Gene3D G3DSA:3.40.50.300 3 272 8.1E-131 T 14-10-2018 Tph_c12770 f221dcf67cccb641017c54545fcf7beb 671 SUPERFAMILY SSF51998 116 653 1.22E-154 T 14-10-2018 Tph_c12770 f221dcf67cccb641017c54545fcf7beb 671 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 115 669 1.6E-197 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Tph_c12770 f221dcf67cccb641017c54545fcf7beb 671 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 239 669 8.7E-143 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 Tph_c12770 f221dcf67cccb641017c54545fcf7beb 671 Gene3D G3DSA:3.20.70.20 123 653 4.6E-189 T 14-10-2018 Tph_c12770 f221dcf67cccb641017c54545fcf7beb 671 Pfam PF03477 ATP cone domain 4 92 1.5E-20 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Tph_c28750 f885388b2c516d74143ee5e30cbb8f95 86 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 2.5E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c28750 f885388b2c516d74143ee5e30cbb8f95 86 Gene3D G3DSA:2.10.260.10 1 51 1.4E-25 T 14-10-2018 Tph_c28750 f885388b2c516d74143ee5e30cbb8f95 86 SMART SM00966 8 51 4.0E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c28750 f885388b2c516d74143ee5e30cbb8f95 86 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 6.8E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c28750 f885388b2c516d74143ee5e30cbb8f95 86 SUPERFAMILY SSF89447 1 53 2.09E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 1.4E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Gene3D G3DSA:3.30.70.2570 482 556 1.4E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Gene3D G3DSA:3.30.70.3380 370 481 3.6E-41 T 14-10-2018 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Gene3D G3DSA:2.40.30.10 188 287 1.5E-35 T 14-10-2018 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 176 2.5E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 SUPERFAMILY SSF52540 2 201 4.16E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 SMART SM00838 400 489 2.5E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Pfam PF00009 Elongation factor Tu GTP binding domain 5 183 8.8E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 SUPERFAMILY SSF54980 295 372 4.68E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Pfam PF03144 Elongation factor Tu domain 2 207 277 3.7E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 TIGRFAM TIGR01393 lepA: elongation factor 4 5 598 5.7E-302 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 SUPERFAMILY SSF54980 401 496 3.42E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Pfam PF00679 Elongation factor G C-terminus 401 487 2.3E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 PRINTS PR00315 GTP-binding elongation factor signature 51 59 6.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 PRINTS PR00315 GTP-binding elongation factor signature 8 21 6.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 PRINTS PR00315 GTP-binding elongation factor signature 92 103 6.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 PRINTS PR00315 GTP-binding elongation factor signature 128 137 6.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 PRINTS PR00315 GTP-binding elongation factor signature 76 86 6.8E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Hamap MF_00071 Elongation factor 4 [lepA]. 1 600 300.728 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Gene3D G3DSA:3.30.70.870 288 369 4.8E-36 T 14-10-2018 Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 SUPERFAMILY SSF50447 168 290 1.06E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c21150 4ebce8b222e7c1fb217cd468c11292b3 600 Gene3D G3DSA:3.40.50.300 1 187 1.0E-73 T 14-10-2018 Tph_c02900 43de921e2e1ba745b4c40031cee595cd 123 SUPERFAMILY SSF88723 17 123 3.36E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c02900 43de921e2e1ba745b4c40031cee595cd 123 Pfam PF01850 PIN domain 16 119 1.0E-9 T 14-10-2018 IPR002716 PIN domain Tph_c28530 728d2d26a386c8aa68dc623da38fe348 293 SUPERFAMILY SSF52151 6 282 2.62E-49 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Tph_c28530 728d2d26a386c8aa68dc623da38fe348 293 Gene3D G3DSA:3.40.1090.10 109 257 2.8E-16 T 14-10-2018 Tph_c28530 728d2d26a386c8aa68dc623da38fe348 293 Gene3D G3DSA:3.40.1090.10 2 102 1.1E-20 T 14-10-2018 Tph_c28530 728d2d26a386c8aa68dc623da38fe348 293 Pfam PF01734 Patatin-like phospholipase 10 203 7.4E-28 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Tph_c26720 3cc8f01bb0133edf8ee0f049ef221ea1 265 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 260 3.5E-116 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tph_c26720 3cc8f01bb0133edf8ee0f049ef221ea1 265 PIRSF PIRSF000388 1 265 9.6E-111 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tph_c26720 3cc8f01bb0133edf8ee0f049ef221ea1 265 SUPERFAMILY SSF51621 3 265 1.06E-108 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tph_c26720 3cc8f01bb0133edf8ee0f049ef221ea1 265 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 5 265 2.4E-104 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tph_c26720 3cc8f01bb0133edf8ee0f049ef221ea1 265 Gene3D G3DSA:3.20.20.60 1 265 1.7E-119 T 14-10-2018 Tph_c26720 3cc8f01bb0133edf8ee0f049ef221ea1 265 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 265 44.739 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Tph_c25720 faba8891ec1c5aa46addc177390caf79 61 Gene3D G3DSA:4.10.830.10 1 61 1.9E-31 T 14-10-2018 Tph_c25720 faba8891ec1c5aa46addc177390caf79 61 SUPERFAMILY SSF57716 3 61 9.27E-23 T 14-10-2018 Tph_c25720 faba8891ec1c5aa46addc177390caf79 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.738 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z Tph_c25720 faba8891ec1c5aa46addc177390caf79 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25720 faba8891ec1c5aa46addc177390caf79 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 9.5E-27 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c16520 e7e8d076437de5022c6876d00290bf6a 466 PIRSF PIRSF004919 1 458 9.4E-155 T 14-10-2018 IPR025502 TldD Tph_c16520 e7e8d076437de5022c6876d00290bf6a 466 Gene3D G3DSA:3.30.2290.10 1 219 1.8E-30 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Tph_c16520 e7e8d076437de5022c6876d00290bf6a 466 SUPERFAMILY SSF111283 3 457 6.28E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Tph_c16520 e7e8d076437de5022c6876d00290bf6a 466 Pfam PF01523 Putative modulator of DNA gyrase 20 312 4.1E-71 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 Pfam PF14804 Jag N-terminus 6 56 2.0E-21 T 14-10-2018 IPR032782 Jag, N-terminal Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 Gene3D G3DSA:3.30.1370.50 141 214 3.2E-25 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 SMART SM01245 5 57 8.1E-23 T 14-10-2018 IPR032782 Jag, N-terminal Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 Gene3D G3DSA:3.30.300.20 60 140 4.5E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 Pfam PF13083 KH domain 63 132 4.8E-13 T 14-10-2018 Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 Gene3D G3DSA:3.30.30.80 1 56 6.3E-20 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 Pfam PF01424 R3H domain 146 203 1.3E-15 T 14-10-2018 IPR001374 R3H domain GO:0003676 Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 SMART SM00393 126 205 1.5E-17 T 14-10-2018 IPR001374 R3H domain GO:0003676 Tph_c00280 3dacc17033fe030e51db6f7fe801a335 214 SUPERFAMILY SSF82708 147 204 1.69E-8 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Tph_c26570 252914546e5fe7cf8e3504e0e1cb2d57 297 Pfam PF00149 Calcineurin-like phosphoesterase 51 235 2.6E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tph_c26570 252914546e5fe7cf8e3504e0e1cb2d57 297 SUPERFAMILY SSF56300 51 296 6.94E-33 T 14-10-2018 Tph_c26570 252914546e5fe7cf8e3504e0e1cb2d57 297 Gene3D G3DSA:3.60.21.10 50 263 5.0E-21 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 Gene3D G3DSA:3.40.640.10 49 293 6.3E-158 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 385 1.1E-161 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 PIRSF PIRSF000521 3 151 4.5E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 PIRSF PIRSF000521 159 387 6.7E-44 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 Gene3D G3DSA:3.90.1150.10 14 378 6.3E-158 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 SUPERFAMILY SSF53383 6 385 1.11E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 Pfam PF00202 Aminotransferase class-III 8 384 1.8E-125 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c25450 c580fa4a3725d6afa4c3c8987b02de6c 392 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 5 387 69.533 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 Tph_c27960 7649e4dfa317a7bc7f7975d5633f4d8c 196 Gene3D G3DSA:3.40.50.300 1 193 7.3E-42 T 14-10-2018 Tph_c27960 7649e4dfa317a7bc7f7975d5633f4d8c 196 SUPERFAMILY SSF52540 1 178 2.47E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27960 7649e4dfa317a7bc7f7975d5633f4d8c 196 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 2 174 1.6E-35 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Tph_c08960 f94e064f07c7b4f5a6233cf6f8a2cbeb 94 SUPERFAMILY SSF141000 2 93 1.07E-30 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Tph_c08960 f94e064f07c7b4f5a6233cf6f8a2cbeb 94 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 2.0E-27 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tph_c08960 f94e064f07c7b4f5a6233cf6f8a2cbeb 94 Gene3D G3DSA:1.10.20.60 1 93 1.3E-30 T 14-10-2018 Tph_c08960 f94e064f07c7b4f5a6233cf6f8a2cbeb 94 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 5.6E-22 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tph_c08960 f94e064f07c7b4f5a6233cf6f8a2cbeb 94 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 94 22.087 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Tph_c12950 d3af3375ac414b5604d6b405c49b0c78 392 Gene3D G3DSA:3.40.50.2000 187 358 6.3E-44 T 14-10-2018 Tph_c12950 d3af3375ac414b5604d6b405c49b0c78 392 Gene3D G3DSA:3.40.50.2000 1 186 5.5E-39 T 14-10-2018 Tph_c12950 d3af3375ac414b5604d6b405c49b0c78 392 Pfam PF13439 Glycosyltransferase Family 4 15 183 4.5E-36 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c12950 d3af3375ac414b5604d6b405c49b0c78 392 Pfam PF00534 Glycosyl transferases group 1 194 355 3.2E-37 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c12950 d3af3375ac414b5604d6b405c49b0c78 392 SUPERFAMILY SSF53756 2 374 5.02E-86 T 14-10-2018 Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 PIRSF PIRSF000808 1 332 3.5E-104 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 Gene3D G3DSA:3.30.428.10 3 327 8.3E-123 T 14-10-2018 IPR036265 HIT-like superfamily Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 SUPERFAMILY SSF54197 1 175 1.42E-48 T 14-10-2018 IPR036265 HIT-like superfamily Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 184 296 8.4E-9 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 174 2.6E-21 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 310 9.8E-38 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 Gene3D G3DSA:3.30.428.10 39 173 8.3E-123 T 14-10-2018 IPR036265 HIT-like superfamily Tph_c11780 8b55d8ee41010cebda91d8635356df3e 346 SUPERFAMILY SSF54197 177 332 1.36E-38 T 14-10-2018 IPR036265 HIT-like superfamily Tph_c24470 ad1ccd3830528729ebadb3ceb08fb9b9 248 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 46 244 1.1E-39 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tph_c24470 ad1ccd3830528729ebadb3ceb08fb9b9 248 Gene3D G3DSA:3.30.70.1890 3 122 2.1E-14 T 14-10-2018 Tph_c24470 ad1ccd3830528729ebadb3ceb08fb9b9 248 Pfam PF01881 CRISPR associated protein Cas6 98 244 2.2E-37 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tph_c24470 ad1ccd3830528729ebadb3ceb08fb9b9 248 PIRSF PIRSF005054 1 248 2.0E-73 T 14-10-2018 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 Tph_c24470 ad1ccd3830528729ebadb3ceb08fb9b9 248 Gene3D G3DSA:3.30.70.1900 127 248 1.6E-28 T 14-10-2018 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PIRSF PIRSF000097 1 119 5.8E-45 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PIRSF PIRSF000097 115 278 3.4E-43 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 Gene3D G3DSA:3.20.20.100 1 285 1.5E-124 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 Pfam PF00248 Aldo/keto reductase family 26 261 8.1E-47 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PRINTS PR00069 Aldo-keto reductase signature 197 221 9.8E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PRINTS PR00069 Aldo-keto reductase signature 35 59 9.8E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PRINTS PR00069 Aldo-keto reductase signature 124 141 9.8E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PRINTS PR00069 Aldo-keto reductase signature 158 187 9.8E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 PRINTS PR00069 Aldo-keto reductase signature 95 113 9.8E-46 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 SUPERFAMILY SSF51430 4 267 1.96E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Tph_c21720 a074e4c57ec7f468e1ccf0fedce6d86d 287 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 124 141 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Tph_c08290 30867aae6a255d116eac27ad064d4681 267 SUPERFAMILY SSF52402 19 219 4.41E-39 T 14-10-2018 Tph_c08290 30867aae6a255d116eac27ad064d4681 267 TIGRFAM TIGR00268 TIGR00268: TIGR00268 family protein 8 261 2.9E-73 T 14-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Tph_c08290 30867aae6a255d116eac27ad064d4681 267 PIRSF PIRSF006661 4 267 3.1E-95 T 14-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Tph_c08290 30867aae6a255d116eac27ad064d4681 267 Gene3D G3DSA:3.40.50.620 1 170 2.7E-28 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c08290 30867aae6a255d116eac27ad064d4681 267 Pfam PF01171 PP-loop family 22 129 7.8E-5 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tph_c00160 928e06616ce63c741c7f5010dbf3b1e6 385 Pfam PF00266 Aminotransferase class-V 6 344 2.1E-49 T 14-10-2018 IPR000192 Aminotransferase class V domain Tph_c00160 928e06616ce63c741c7f5010dbf3b1e6 385 PIRSF PIRSF000524 1 385 4.5E-147 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 Tph_c00160 928e06616ce63c741c7f5010dbf3b1e6 385 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 184 204 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tph_c00160 928e06616ce63c741c7f5010dbf3b1e6 385 Gene3D G3DSA:3.90.1150.10 11 373 2.4E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c00160 928e06616ce63c741c7f5010dbf3b1e6 385 SUPERFAMILY SSF53383 4 360 3.84E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c00160 928e06616ce63c741c7f5010dbf3b1e6 385 Gene3D G3DSA:3.40.640.10 16 260 2.4E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c07720 71d3b6d625b9c4f8161cb0a63b2529be 317 Pfam PF13276 HTH-like domain 56 112 9.1E-8 T 14-10-2018 IPR025948 HTH-like domain Tph_c07720 71d3b6d625b9c4f8161cb0a63b2529be 317 Gene3D G3DSA:3.30.420.10 137 292 5.3E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c07720 71d3b6d625b9c4f8161cb0a63b2529be 317 Pfam PF00665 Integrase core domain 140 257 4.0E-18 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c07720 71d3b6d625b9c4f8161cb0a63b2529be 317 SUPERFAMILY SSF53098 134 296 6.07E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c08870 11ec3e3e997f3a07b21b19a1c9ca17c6 252 Gene3D G3DSA:3.20.20.70 1 252 5.1E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c08870 11ec3e3e997f3a07b21b19a1c9ca17c6 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 1.6E-116 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Tph_c08870 11ec3e3e997f3a07b21b19a1c9ca17c6 252 Pfam PF00977 Histidine biosynthesis protein 5 234 7.4E-91 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Tph_c08870 11ec3e3e997f3a07b21b19a1c9ca17c6 252 SUPERFAMILY SSF51366 1 251 9.42E-88 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c08870 11ec3e3e997f3a07b21b19a1c9ca17c6 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 49.665 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Tph_c13500 9212e8892dde3cf4fdf2ac966c49bd17 134 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 96 114 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c13500 9212e8892dde3cf4fdf2ac966c49bd17 134 PIRSF PIRSF004681 2 133 2.8E-45 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c13500 9212e8892dde3cf4fdf2ac966c49bd17 134 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 6 131 2.1E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c13500 9212e8892dde3cf4fdf2ac966c49bd17 134 Pfam PF01894 Uncharacterised protein family UPF0047 19 131 5.2E-42 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c13500 9212e8892dde3cf4fdf2ac966c49bd17 134 Gene3D G3DSA:2.60.120.460 1 133 7.4E-53 T 14-10-2018 IPR035917 YjbQ-like superfamily Tph_c13500 9212e8892dde3cf4fdf2ac966c49bd17 134 SUPERFAMILY SSF111038 6 132 3.4E-48 T 14-10-2018 IPR035917 YjbQ-like superfamily Tph_c15760 dae44952cab71eac7c6f9d0f47d88dce 138 Pfam PF09021 HutP 9 135 1.4E-48 T 14-10-2018 IPR015111 Hut operon regulatory protein HutP Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 Gene3D G3DSA:1.10.10.60 275 333 1.6E-14 T 14-10-2018 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 106 121 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 SUPERFAMILY SSF46689 233 331 3.29E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 233 242 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 43 56 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 Gene3D G3DSA:1.10.8.60 191 269 6.8E-27 T 14-10-2018 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 314 334 1.7E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 297 314 1.7E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 SUPERFAMILY SSF52540 18 263 4.33E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 Pfam PF02954 Bacterial regulatory protein, Fis family 293 331 4.5E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 Gene3D G3DSA:3.40.50.300 6 190 3.6E-64 T 14-10-2018 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 Pfam PF00158 Sigma-54 interaction domain 19 186 9.5E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c03880 aae5207d49074ea24f6eb040a6771b2e 337 SMART SM00382 39 187 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10120 a27efc057b9142352220667103b36a97 334 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 330 3.0E-110 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tph_c10120 a27efc057b9142352220667103b36a97 334 Pfam PF02504 Fatty acid synthesis protein 1 319 1.8E-111 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Tph_c10120 a27efc057b9142352220667103b36a97 334 Gene3D G3DSA:3.40.718.10 1 334 2.1E-132 T 14-10-2018 Tph_c10120 a27efc057b9142352220667103b36a97 334 SUPERFAMILY SSF53659 1 328 6.99E-98 T 14-10-2018 Tph_c10120 a27efc057b9142352220667103b36a97 334 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 334 136.972 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tph_c10120 a27efc057b9142352220667103b36a97 334 PIRSF PIRSF002465 1 334 2.1E-121 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 SMART SM00283 400 675 1.6E-70 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 Gene3D G3DSA:1.10.287.950 369 675 2.1E-67 T 14-10-2018 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 SMART SM00304 316 371 6.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 Pfam PF02743 Cache domain 40 278 1.3E-30 T 14-10-2018 IPR033479 Double Cache domain 1 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 Gene3D G3DSA:1.10.8.500 316 368 3.9E-7 T 14-10-2018 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 SUPERFAMILY SSF58104 346 675 3.92E-67 T 14-10-2018 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 474 603 8.1E-39 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c05130 d30d95fc73401615551837ef545ba47b 676 Gene3D G3DSA:3.30.450.20 148 298 3.4E-32 T 14-10-2018 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 SUPERFAMILY SSF56553 51 172 1.57E-45 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 SUPERFAMILY SSF55257 8 226 5.49E-31 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 SUPERFAMILY SSF47789 248 313 3.53E-25 T 14-10-2018 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 153 9.1E-25 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Gene3D G3DSA:1.10.150.20 237 315 6.1E-34 T 14-10-2018 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Gene3D G3DSA:2.170.120.12 51 171 3.6E-90 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 220 1.0E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 254 312 5.0E-22 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 314 38.328 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 SMART SM00662 21 228 1.1E-102 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 4.3E-122 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 306 1.7E-28 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25570 3b3fc3f0c126ff7285a6b02c947fc7aa 316 Gene3D G3DSA:3.30.1360.10 16 219 3.6E-90 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c29080 b417731f45b8f8025c456d2b98f26f6d 357 SUPERFAMILY SSF53448 1 280 6.22E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c29080 b417731f45b8f8025c456d2b98f26f6d 357 Pfam PF01050 Mannose-6-phosphate isomerase 316 355 2.1E-5 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Tph_c29080 b417731f45b8f8025c456d2b98f26f6d 357 Pfam PF00483 Nucleotidyl transferase 4 286 5.2E-44 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tph_c29080 b417731f45b8f8025c456d2b98f26f6d 357 SUPERFAMILY SSF159283 284 349 1.44E-16 T 14-10-2018 Tph_c29080 b417731f45b8f8025c456d2b98f26f6d 357 Gene3D G3DSA:3.90.550.10 1 351 1.4E-113 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c12850 77ec34799746306d223606ac36ab52f8 256 Gene3D G3DSA:1.10.3730.10 153 255 2.1E-40 T 14-10-2018 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 1 87 1.1E-13 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Tph_c12850 77ec34799746306d223606ac36ab52f8 256 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 150 253 1.1E-39 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 210 232 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 SUPERFAMILY SSF51735 1 147 1.84E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c12850 77ec34799746306d223606ac36ab52f8 256 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 1 254 1.2E-84 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 SUPERFAMILY SSF48179 150 254 8.16E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 254 25.663 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 PIRSF PIRSF000193 1 256 5.7E-83 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Tph_c12850 77ec34799746306d223606ac36ab52f8 256 Gene3D G3DSA:3.40.50.720 1 152 9.3E-46 T 14-10-2018 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 Gene3D G3DSA:3.20.20.70 1 293 3.7E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 2.4E-102 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 289 1.8E-110 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 SUPERFAMILY SSF51569 3 290 9.63E-101 T 14-10-2018 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 3.0E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 3.0E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 3.0E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 3.0E-36 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 64.63 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 PIRSF PIRSF001365 1 294 5.6E-92 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Tph_c11460 ffd9a9b4bcf5078898b85c485dbe56bf 294 SMART SM01130 3 291 3.7E-138 T 14-10-2018 IPR002220 DapA-like GO:0016829 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Gene3D G3DSA:3.40.1190.10 483 727 5.7E-46 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Gene3D G3DSA:3.30.470.20 382 482 8.7E-13 T 14-10-2018 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Pfam PF08245 Mur ligase middle domain 499 710 1.5E-25 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Gene3D G3DSA:3.30.1490.20 243 309 2.9E-19 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Pfam PF02875 Mur ligase family, glutamate ligase domain 736 808 3.8E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 SUPERFAMILY SSF56059 228 467 3.71E-38 T 14-10-2018 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 SUPERFAMILY SSF53623 457 744 5.23E-47 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 16 874 0.0 T 14-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Gene3D G3DSA:3.30.470.20 220 332 2.9E-19 T 14-10-2018 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Gene3D G3DSA:3.90.190.20 739 875 2.8E-23 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 SUPERFAMILY SSF53244 735 863 4.12E-24 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 SMART SM01209 227 354 0.0086 T 14-10-2018 Tph_c28390 7d947d49d344f9278773bc566ef6c443 895 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 228 311 4.6E-8 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 Gene3D G3DSA:3.10.290.10 6 73 8.6E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 308 2.9E-97 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 Pfam PF01479 S4 domain 19 64 3.0E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 Pfam PF00849 RNA pseudouridylate synthase 91 248 1.7E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 SMART SM00363 18 82 5.8E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 Gene3D G3DSA:3.30.2350.10 74 296 1.5E-76 T 14-10-2018 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 SUPERFAMILY SSF55174 17 104 4.37E-15 T 14-10-2018 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c12970 dc8e98b3b36fa38cec492871d40fc8f6 313 SUPERFAMILY SSF55120 77 309 2.35E-77 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c16290 7254d703536d6656fd74b22af131fc3d 92 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 17 77 12.869 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tph_c16290 7254d703536d6656fd74b22af131fc3d 92 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 20 58 3.0E-5 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tph_c16290 7254d703536d6656fd74b22af131fc3d 92 Pfam PF02609 Exonuclease VII small subunit 18 69 3.2E-15 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tph_c16290 7254d703536d6656fd74b22af131fc3d 92 SUPERFAMILY SSF116842 13 77 5.75E-16 T 14-10-2018 Tph_c16290 7254d703536d6656fd74b22af131fc3d 92 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 17 72 2.4E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 Tph_c16290 7254d703536d6656fd74b22af131fc3d 92 Gene3D G3DSA:1.10.287.1040 8 81 9.5E-19 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 Gene3D G3DSA:3.30.360.10 137 344 9.1E-164 T 14-10-2018 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 Gene3D G3DSA:3.40.50.720 5 340 9.1E-164 T 14-10-2018 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 Pfam PF00742 Homoserine dehydrogenase 138 316 3.4E-69 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 Gene3D G3DSA:3.30.70.260 345 421 9.1E-164 T 14-10-2018 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 Pfam PF01842 ACT domain 350 417 3.4E-12 T 14-10-2018 IPR002912 ACT domain Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 PIRSF PIRSF000098 2 433 5.2E-171 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 11 130 2.5E-21 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 SUPERFAMILY SSF55021 348 425 1.68E-12 T 14-10-2018 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 SUPERFAMILY SSF55347 138 303 1.96E-56 T 14-10-2018 Tph_c15560 4364a4ff5bc808f901236d12b2acf28d 436 SUPERFAMILY SSF51735 2 159 3.83E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c14200 773ef1e15e760910ad77eba64de13c91 156 SUPERFAMILY SSF53098 59 115 7.02E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c14200 773ef1e15e760910ad77eba64de13c91 156 Pfam PF13276 HTH-like domain 10 49 2.8E-11 T 14-10-2018 IPR025948 HTH-like domain Tph_c24850 c2a27a323031b6d306003da0dc13d1d5 101 Pfam PF02627 Carboxymuconolactone decarboxylase family 16 90 5.1E-10 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Tph_c24850 c2a27a323031b6d306003da0dc13d1d5 101 SUPERFAMILY SSF69118 3 99 1.02E-19 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tph_c24850 c2a27a323031b6d306003da0dc13d1d5 101 Gene3D G3DSA:1.20.1290.10 1 100 3.4E-20 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 409 426 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 56 72 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 135 159 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 357 376 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 259 285 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 37 56 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PRINTS PR01806 Virulence factor MviN signature 159 180 2.7E-34 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 PIRSF PIRSF002869 2 514 5.2E-144 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 9 509 1.8E-120 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 467 18.371 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21160 6de4a3e5e6e1a577952931b46d5d3130 529 Pfam PF03023 MviN-like protein 35 468 6.3E-107 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 Gene3D G3DSA:3.90.1150.10 12 392 5.7E-193 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 Gene3D G3DSA:3.40.640.10 39 289 5.7E-193 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 224 240 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 9 414 54.26 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 PIRSF PIRSF000412 1 415 5.2E-174 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 Pfam PF00464 Serine hydroxymethyltransferase 10 386 8.7E-181 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Tph_c27020 f8783bfc834c34bbdae10b4c3af194a3 419 SUPERFAMILY SSF53383 7 414 1.63E-183 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c10960 7940be8fd603ab61b71cca0ca3be9ecf 120 SMART SM00448 3 115 5.5E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c10960 7940be8fd603ab61b71cca0ca3be9ecf 120 SUPERFAMILY SSF52172 3 120 7.26E-41 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c10960 7940be8fd603ab61b71cca0ca3be9ecf 120 Pfam PF00072 Response regulator receiver domain 5 115 2.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c10960 7940be8fd603ab61b71cca0ca3be9ecf 120 Gene3D G3DSA:3.40.50.2300 2 120 3.5E-40 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF04998 RNA polymerase Rpb1, domain 5 732 949 4.9E-52 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 SMART SM00663 229 508 5.3E-185 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF04983 RNA polymerase Rpb1, domain 3 483 625 2.5E-29 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1157 18.813 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF04998 RNA polymerase Rpb1, domain 5 952 1090 3.4E-16 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF04997 RNA polymerase Rpb1, domain 1 10 336 2.9E-90 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:1.10.1790.20 912 1089 5.5E-74 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF00623 RNA polymerase Rpb1, domain 2 338 377 6.4E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF00623 RNA polymerase Rpb1, domain 2 382 479 6.0E-28 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:1.10.40.90 368 410 1.3E-24 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:2.40.50.100 928 990 5.5E-74 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 TIGRFAM TIGR02388 rpoC2_cyan: DNA-directed RNA polymerase, beta'' subunit 572 907 1.3E-141 T 14-10-2018 IPR012756 DNA-directed RNA polymerase, subunit beta'' GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 14 1142 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:1.10.274.100 484 545 2.5E-24 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:1.10.274.100 546 621 1.4E-23 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 SUPERFAMILY SSF64484 10 1145 0.0 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Pfam PF05000 RNA polymerase Rpb1, domain 4 654 727 2.4E-14 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:1.10.150.390 1091 1153 3.8E-30 T 14-10-2018 Tph_c25920 6966d44b60296b123726eeef318b4052 1187 Gene3D G3DSA:1.10.132.30 622 756 3.2E-63 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c19240 06e454aaedfe4330a88271839810d82c 287 Gene3D G3DSA:3.40.1190.20 36 283 2.9E-20 T 14-10-2018 IPR029056 Ribokinase-like Tph_c19240 06e454aaedfe4330a88271839810d82c 287 Pfam PF01256 Carbohydrate kinase 112 261 1.3E-9 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Tph_c19240 06e454aaedfe4330a88271839810d82c 287 SUPERFAMILY SSF53613 78 280 3.44E-21 T 14-10-2018 IPR029056 Ribokinase-like Tph_c18030 25cc3d6a75c80c5c725d56139e91a271 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 443 5.6E-64 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c18030 25cc3d6a75c80c5c725d56139e91a271 545 Gene3D G3DSA:3.40.190.10 51 518 2.3E-107 T 14-10-2018 Tph_c18030 25cc3d6a75c80c5c725d56139e91a271 545 Gene3D G3DSA:3.90.76.10 71 192 2.3E-107 T 14-10-2018 Tph_c18030 25cc3d6a75c80c5c725d56139e91a271 545 Gene3D G3DSA:3.10.105.10 292 506 2.3E-107 T 14-10-2018 Tph_c18030 25cc3d6a75c80c5c725d56139e91a271 545 SUPERFAMILY SSF53850 43 528 7.06E-103 T 14-10-2018 Tph_c18030 25cc3d6a75c80c5c725d56139e91a271 545 PIRSF PIRSF002741 36 530 1.9E-75 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 SUPERFAMILY SSF52242 81 208 1.44E-26 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 Pfam PF02607 B12 binding domain 5 69 1.3E-6 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 SMART SM01018 1 82 0.0015 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 Gene3D G3DSA:3.40.50.280 81 206 1.1E-29 T 14-10-2018 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 Pfam PF02310 B12 binding domain 88 192 3.2E-12 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 Gene3D G3DSA:1.10.1240.10 2 76 1.4E-12 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27980 6550b88e18c8ecaac8f0faa985f801a0 221 SUPERFAMILY SSF47644 5 71 4.58E-10 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c23960 0fc9b9b28175f2ee9a491a7db4eb8e81 135 Pfam PF01989 Protein of unknown function DUF126 27 106 1.4E-32 T 14-10-2018 IPR002840 Aconitase X swivel domain, putative Tph_c23960 0fc9b9b28175f2ee9a491a7db4eb8e81 135 SUPERFAMILY SSF52016 5 131 8.63E-42 T 14-10-2018 Tph_c23960 0fc9b9b28175f2ee9a491a7db4eb8e81 135 Hamap MF_00078 UPF0107 protein . 5 132 29.166 T 14-10-2018 IPR020794 Aconitase X subunit 2, archaeal, putative Tph_c23960 0fc9b9b28175f2ee9a491a7db4eb8e81 135 Gene3D G3DSA:3.50.30.10 4 135 2.3E-48 T 14-10-2018 Tph_c23960 0fc9b9b28175f2ee9a491a7db4eb8e81 135 PIRSF PIRSF004966 3 134 1.1E-45 T 14-10-2018 IPR012016 Aconitase X subunit 2, putative Tph_c17130 577cb6c8a27fed7ea6f00f1fbd2f7f01 559 Pfam PF07905 Purine catabolism regulatory protein-like family 22 132 3.3E-28 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain Tph_c17130 577cb6c8a27fed7ea6f00f1fbd2f7f01 559 Pfam PF13556 PucR C-terminal helix-turn-helix domain 495 547 1.6E-7 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tph_c17130 577cb6c8a27fed7ea6f00f1fbd2f7f01 559 Gene3D G3DSA:1.10.10.2840 425 556 2.4E-10 T 14-10-2018 Tph_c26110 2a780ce99414496ce7efed116d112012 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 20.359 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26110 2a780ce99414496ce7efed116d112012 49 Gene3D G3DSA:2.20.28.120 1 49 5.3E-26 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26110 2a780ce99414496ce7efed116d112012 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c26110 2a780ce99414496ce7efed116d112012 49 SUPERFAMILY SSF57829 2 49 1.59E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Tph_c26110 2a780ce99414496ce7efed116d112012 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 49 8.3E-23 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26110 2a780ce99414496ce7efed116d112012 49 Pfam PF00471 Ribosomal protein L33 4 49 2.9E-25 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 SUPERFAMILY SSF55781 93 360 1.18E-53 T 14-10-2018 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 24 89 2.7E-5 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 23 352 28.332 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 Gene3D G3DSA:1.10.10.10 15 107 8.9E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 PIRSF PIRSF005485 21 362 5.2E-103 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 26 358 7.4E-100 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 Pfam PF01628 HrcA protein C terminal domain 127 345 4.7E-53 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 Gene3D G3DSA:3.30.450.40 127 359 1.4E-48 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 Gene3D G3DSA:3.30.390.60 150 250 1.4E-48 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Tph_c21130 40c924d0c64fe40279c06b5720bd033a 365 SUPERFAMILY SSF46785 24 106 9.1E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c00540 fab0798c7e2a969551f48991f02c7714 407 Gene3D G3DSA:1.10.10.2840 262 391 1.3E-18 T 14-10-2018 Tph_c00540 fab0798c7e2a969551f48991f02c7714 407 Pfam PF13556 PucR C-terminal helix-turn-helix domain 330 388 3.2E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 SUPERFAMILY SSF50249 6 87 2.18E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 6.0E-29 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 2.5E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 2.5E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 2.5E-13 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 Gene3D G3DSA:2.40.50.140 6 85 2.0E-37 T 14-10-2018 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 1.4E-37 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 Pfam PF00366 Ribosomal protein S17 12 79 6.3E-35 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25760 de000371a35fad40388485a73f9ea0e9 108 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 26.421 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Gene3D G3DSA:3.20.20.140 1 276 1.5E-117 T 14-10-2018 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 1020 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Gene3D G3DSA:1.10.150.870 765 871 8.9E-8 T 14-10-2018 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Gene3D G3DSA:1.10.10.1600 431 507 5.5E-30 T 14-10-2018 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Pfam PF14579 Helix-hairpin-helix motif 794 884 1.3E-29 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 SMART SM00481 6 73 3.0E-32 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Pfam PF02811 PHP domain 7 179 8.2E-55 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 SUPERFAMILY SSF89550 5 269 8.04E-37 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Pfam PF01336 OB-fold nucleic acid binding domain 984 1059 9.5E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Gene3D G3DSA:2.40.50.140 965 1067 2.3E-5 T 14-10-2018 Tph_c09340 a00cddf7962beb8ce83a56d9771cd945 1157 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 297 719 4.8E-186 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 Pfam PF00196 Bacterial regulatory proteins, luxR family 226 278 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 SUPERFAMILY SSF46894 214 281 3.13E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 Gene3D G3DSA:1.10.10.10 195 283 1.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 SMART SM00421 224 281 6.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 241 257 7.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 227 241 7.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 257 269 7.7E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 Gene3D G3DSA:3.30.450.40 19 194 6.3E-38 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c17500 b4e8927a5106e3d31868335ad0584fe2 283 SUPERFAMILY SSF55781 51 198 3.99E-6 T 14-10-2018 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Pfam PF00488 MutS domain V 327 508 6.6E-35 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Gene3D G3DSA:3.30.1370.110 705 793 2.9E-25 T 14-10-2018 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 406 422 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 TIGRFAM TIGR01069 mutS2: MutS2 family protein 5 793 1.8E-213 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 SMART SM00534 324 509 6.7E-75 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 792 20.228 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 SUPERFAMILY SSF48334 22 284 3.01E-29 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 SUPERFAMILY SSF52540 290 509 5.75E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Pfam PF01713 Smr domain 719 793 7.2E-20 T 14-10-2018 IPR002625 Smr domain Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 SMART SM00463 715 793 2.5E-18 T 14-10-2018 IPR002625 Smr domain Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Gene3D G3DSA:1.10.1420.10 111 224 5.9E-10 T 14-10-2018 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 SUPERFAMILY SSF160443 717 793 2.48E-10 T 14-10-2018 IPR036063 Smr domain superfamily Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 SMART SM00533 9 312 5.7E-22 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Gene3D G3DSA:3.40.50.300 294 594 3.0E-82 T 14-10-2018 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 PIRSF PIRSF005814 1 793 1.3E-245 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 Tph_c13440 194b4a859adfafc0f03ec0f0491528c5 793 Gene3D G3DSA:1.10.1420.10 34 277 5.9E-10 T 14-10-2018 Tph_c03070 c27151c7f5660f46dd94b0b3d8b0b301 85 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 42 3.6E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c03070 c27151c7f5660f46dd94b0b3d8b0b301 85 SMART SM00966 4 47 1.9E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c03070 c27151c7f5660f46dd94b0b3d8b0b301 85 Gene3D G3DSA:2.10.260.10 2 49 3.0E-13 T 14-10-2018 Tph_c03070 c27151c7f5660f46dd94b0b3d8b0b301 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 39 1.4E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c03070 c27151c7f5660f46dd94b0b3d8b0b301 85 SUPERFAMILY SSF89447 2 44 4.71E-12 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c15390 6059a61f7cdf44ce3a8d6c36dc783d71 266 Gene3D G3DSA:3.30.70.20 5 200 2.1E-68 T 14-10-2018 Tph_c15390 6059a61f7cdf44ce3a8d6c36dc783d71 266 Pfam PF13247 4Fe-4S dicluster domain 67 163 2.9E-26 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c15390 6059a61f7cdf44ce3a8d6c36dc783d71 266 PIRSF PIRSF036298 2 265 2.0E-76 T 14-10-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 Tph_c15390 6059a61f7cdf44ce3a8d6c36dc783d71 266 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 107 118 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c15390 6059a61f7cdf44ce3a8d6c36dc783d71 266 SUPERFAMILY SSF54862 4 234 4.71E-62 T 14-10-2018 Tph_c15390 6059a61f7cdf44ce3a8d6c36dc783d71 266 Gene3D G3DSA:3.30.70.20 74 136 2.1E-68 T 14-10-2018 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 SUPERFAMILY SSF82829 214 321 1.57E-16 T 14-10-2018 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 Pfam PF09179 TilS substrate binding domain 256 317 1.6E-6 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 SUPERFAMILY SSF56037 378 470 1.52E-24 T 14-10-2018 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 399 444 2.3E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 Pfam PF11734 TilS substrate C-terminal domain 399 454 2.5E-19 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 Pfam PF01171 PP-loop family 24 202 5.2E-51 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 SUPERFAMILY SSF52402 11 237 9.58E-57 T 14-10-2018 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 Gene3D G3DSA:1.20.59.30 245 328 8.8E-9 T 14-10-2018 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 23 206 3.0E-53 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 SMART SM00977 399 471 4.2E-28 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 Gene3D G3DSA:3.40.50.620 2 212 2.4E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c26820 fb2ffe1241479a539af5bb780d5901c8 484 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 317 24.996 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Tph_c15490 f8eff71459ee660e90fb683add7de3a2 128 Gene3D G3DSA:3.30.360.110 4 65 1.5E-25 T 14-10-2018 Tph_c15490 f8eff71459ee660e90fb683add7de3a2 128 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 6 116 1.1E-46 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tph_c15490 f8eff71459ee660e90fb683add7de3a2 128 SUPERFAMILY SSF56276 7 119 4.32E-45 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 Tph_c15490 f8eff71459ee660e90fb683add7de3a2 128 Pfam PF02675 S-adenosylmethionine decarboxylase 10 116 7.8E-42 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tph_c15490 f8eff71459ee660e90fb683add7de3a2 128 Gene3D G3DSA:3.30.160.750 66 126 1.3E-25 T 14-10-2018 Tph_c15490 f8eff71459ee660e90fb683add7de3a2 128 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 4 120 32.64 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 Tph_c03690 eeb3aca57a78cc979733d4387c242187 147 Gene3D G3DSA:1.10.10.1240 1 69 4.3E-31 T 14-10-2018 Tph_c03690 eeb3aca57a78cc979733d4387c242187 147 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 2 120 2.4E-33 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 Tph_c01990 dd906ca9690b27d452dc10212faa3070 389 Gene3D G3DSA:3.40.50.1110 83 163 3.0E-8 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Tph_c01990 dd906ca9690b27d452dc10212faa3070 389 Gene3D G3DSA:3.40.50.1110 226 382 2.6E-5 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Tph_c01990 dd906ca9690b27d452dc10212faa3070 389 SUPERFAMILY SSF52266 81 152 2.5E-10 T 14-10-2018 Tph_c01990 dd906ca9690b27d452dc10212faa3070 389 SUPERFAMILY SSF52266 311 384 1.08E-6 T 14-10-2018 Tph_c14570 9b829e4b1b721f65271ec86e9a3ddbad 515 Gene3D G3DSA:3.40.50.300 36 492 9.1E-23 T 14-10-2018 Tph_c14570 9b829e4b1b721f65271ec86e9a3ddbad 515 Pfam PF13476 AAA domain 40 275 7.7E-11 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Tph_c14570 9b829e4b1b721f65271ec86e9a3ddbad 515 SUPERFAMILY SSF52540 37 289 8.35E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21730 615737329bbd1aa8789af8a745687d29 401 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 372 2.2E-107 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tph_c21730 615737329bbd1aa8789af8a745687d29 401 Gene3D G3DSA:1.20.1090.10 191 401 1.5E-46 T 14-10-2018 Tph_c21730 615737329bbd1aa8789af8a745687d29 401 Gene3D G3DSA:3.40.50.1970 1 190 1.4E-57 T 14-10-2018 Tph_c21730 615737329bbd1aa8789af8a745687d29 401 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 179 207 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tph_c21730 615737329bbd1aa8789af8a745687d29 401 SUPERFAMILY SSF56796 4 370 1.15E-107 T 14-10-2018 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 6 476 1.2E-248 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 Hamap MF_01347 ATP synthase subunit beta [atpB]. 4 476 57.511 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 SMART SM00382 157 343 6.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 SUPERFAMILY SSF50615 5 90 6.54E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 Gene3D G3DSA:3.40.50.300 91 360 7.5E-117 T 14-10-2018 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 358 4.7E-66 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 9 87 1.1E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 SUPERFAMILY SSF47917 361 476 1.99E-50 T 14-10-2018 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 SUPERFAMILY SSF52540 92 363 8.32E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 Gene3D G3DSA:2.40.10.170 5 90 4.4E-27 T 14-10-2018 Tph_c27370 825a0f33a636cf10c8a0ee84d5462cba 480 Gene3D G3DSA:1.10.1140.10 361 479 1.7E-55 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c03540 4c08316ecab5d2705f9d0846660e5cf0 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 285 1.5E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c03540 4c08316ecab5d2705f9d0846660e5cf0 290 Gene3D G3DSA:1.10.3720.10 75 289 3.4E-22 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c03540 4c08316ecab5d2705f9d0846660e5cf0 290 SUPERFAMILY SSF161098 79 266 6.15E-28 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c03540 4c08316ecab5d2705f9d0846660e5cf0 290 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 61 1.8E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Tph_c15100 61016ec13824e6ba92241494b00b7ab6 313 SUPERFAMILY SSF51730 15 308 7.46E-69 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Tph_c15100 61016ec13824e6ba92241494b00b7ab6 313 Pfam PF02219 Methylenetetrahydrofolate reductase 20 306 1.5E-35 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c15100 61016ec13824e6ba92241494b00b7ab6 313 Gene3D G3DSA:3.20.20.220 17 310 8.8E-56 T 14-10-2018 Tph_c04810 ff397bcfed87822b2078c71818f1c53c 194 SUPERFAMILY SSF53323 5 194 5.89E-44 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c04810 ff397bcfed87822b2078c71818f1c53c 194 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 191 2.3E-38 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tph_c04810 ff397bcfed87822b2078c71818f1c53c 194 Gene3D G3DSA:3.40.920.10 3 194 1.5E-49 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c13760 8b81175005a3cd4ae21efa9218274449 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 1.4E-34 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tph_c13760 8b81175005a3cd4ae21efa9218274449 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 325 5.0E-118 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tph_c13760 8b81175005a3cd4ae21efa9218274449 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 325 67.42 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tph_c13760 8b81175005a3cd4ae21efa9218274449 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 7.6E-29 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Tph_c13760 8b81175005a3cd4ae21efa9218274449 327 SUPERFAMILY SSF53901 4 326 1.71E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c13760 8b81175005a3cd4ae21efa9218274449 327 Gene3D G3DSA:3.40.47.10 1 327 2.3E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c19820 4f53e42e422482999a94afead597676a 166 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 160 1.8E-65 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tph_c19820 4f53e42e422482999a94afead597676a 166 Gene3D G3DSA:3.20.19.10 1 166 4.0E-63 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tph_c19820 4f53e42e422482999a94afead597676a 166 Pfam PF00694 Aconitase C-terminal domain 50 105 1.5E-18 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tph_c19820 4f53e42e422482999a94afead597676a 166 SUPERFAMILY SSF52016 3 162 1.0E-53 T 14-10-2018 Tph_c19820 4f53e42e422482999a94afead597676a 166 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 163 41.461 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tph_c19820 4f53e42e422482999a94afead597676a 166 TIGRFAM TIGR02084 leud: 3-isopropylmalate dehydratase, small subunit 5 160 2.0E-78 T 14-10-2018 IPR011824 Hydrolyase LeuD/DmdB, bacterial GO:0016836 KEGG: 00290+4.2.1.33 Tph_c09740 d5206c022ee4c924c71f244ea51f15ff 259 SUPERFAMILY SSF89550 7 255 3.53E-36 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c09740 d5206c022ee4c924c71f244ea51f15ff 259 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 60 235 7.3E-33 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 Tph_c09740 d5206c022ee4c924c71f244ea51f15ff 259 Pfam PF13263 PHP-associated 210 229 5.8E-5 T 14-10-2018 Tph_c09740 d5206c022ee4c924c71f244ea51f15ff 259 Gene3D G3DSA:3.20.20.140 8 259 1.5E-59 T 14-10-2018 Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 SUPERFAMILY SSF47781 336 399 1.87E-13 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Gene3D G3DSA:3.40.1700.10 62 196 2.6E-55 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 SUPERFAMILY SSF143597 72 195 4.97E-30 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 79 191 3.8E-26 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 57 408 44.294 T 14-10-2018 IPR023763 DNA integrity scanning protein, DisA Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Pfam PF10635 DisA bacterial checkpoint controller linker region 196 334 1.8E-53 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Gene3D G3DSA:1.10.150.20 344 408 2.5E-27 T 14-10-2018 Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Pfam PF12826 Helix-hairpin-helix motif 360 400 3.1E-7 T 14-10-2018 Tph_c03820 f256c3d75cb524d378478dce9b176b7c 412 Gene3D G3DSA:1.20.1260.110 197 343 2.3E-46 T 14-10-2018 IPR038331 DisA, linker domain superfamily Tph_c03980 6c83e5e57950a7d5e5723aba038c5e21 291 Pfam PF12849 PBP superfamily domain 33 259 1.3E-29 T 14-10-2018 IPR024370 PBP domain Tph_c03980 6c83e5e57950a7d5e5723aba038c5e21 291 Gene3D G3DSA:3.40.190.10 116 228 1.9E-95 T 14-10-2018 Tph_c03980 6c83e5e57950a7d5e5723aba038c5e21 291 Gene3D G3DSA:3.40.190.10 41 265 1.9E-95 T 14-10-2018 Tph_c03980 6c83e5e57950a7d5e5723aba038c5e21 291 SUPERFAMILY SSF53850 39 268 6.65E-31 T 14-10-2018 Tph_c25710 307ebb8757a0a683732fc3e14904c6f5 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 131 33.556 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25710 307ebb8757a0a683732fc3e14904c6f5 131 Gene3D G3DSA:3.30.1490.10 74 131 1.9E-28 T 14-10-2018 Tph_c25710 307ebb8757a0a683732fc3e14904c6f5 131 SUPERFAMILY SSF56047 1 131 1.57E-49 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25710 307ebb8757a0a683732fc3e14904c6f5 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25710 307ebb8757a0a683732fc3e14904c6f5 131 Pfam PF00410 Ribosomal protein S8 4 131 3.7E-53 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25710 307ebb8757a0a683732fc3e14904c6f5 131 Gene3D G3DSA:3.30.1370.30 1 73 1.8E-30 T 14-10-2018 Tph_c08840 b229ac17691801c331ad065cd97514f6 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tph_c08840 b229ac17691801c331ad065cd97514f6 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 6.6E-64 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tph_c08840 b229ac17691801c331ad065cd97514f6 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 42.17 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tph_c08840 b229ac17691801c331ad065cd97514f6 195 Gene3D G3DSA:3.30.230.40 91 195 8.2E-36 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Tph_c08840 b229ac17691801c331ad065cd97514f6 195 SUPERFAMILY SSF54211 3 87 1.77E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c08840 b229ac17691801c331ad065cd97514f6 195 SUPERFAMILY SSF54211 88 180 3.41E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c08840 b229ac17691801c331ad065cd97514f6 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Tph_c08840 b229ac17691801c331ad065cd97514f6 195 Gene3D G3DSA:3.30.230.40 1 90 8.1E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 ProSitePatterns PS00756 Protein secY signature 2. 166 183 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 Pfam PF00344 SecY translocase 68 407 1.5E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 SUPERFAMILY SSF103491 2 414 1.14E-124 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PIRSF PIRSF004557 1 424 2.6E-120 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 Gene3D G3DSA:1.10.3370.10 1 419 2.1E-167 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 108 131 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 265 284 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 359 377 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 392 410 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 304 326 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 8.1E-97 T 14-10-2018 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 423 30.743 T 14-10-2018 IPR026593 Protein translocase subunit SecY Tph_c25660 8b7ef2a1c3dfa6bf8756edf459d9744e 424 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 418 4.4E-127 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:3.90.1800.10 964 1018 1.1E-10 T 14-10-2018 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1054 12.864 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:2.30.150.10 464 531 0.0 T 14-10-2018 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 325 4.6E-43 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 211 803 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:2.40.50.150 695 826 0.0 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:2.40.270.10 915 954 2.8E-14 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Pfam PF04565 RNA polymerase Rpb2, domain 3 384 452 2.2E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:2.40.270.10 17 912 0.0 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:3.90.1110.10 143 316 0.0 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:3.90.1100.10 20 588 0.0 T 14-10-2018 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Gene3D G3DSA:2.40.50.100 589 663 0.0 T 14-10-2018 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 ProSitePatterns PS01166 RNA polymerases beta chain signature. 829 841 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Pfam PF00562 RNA polymerase Rpb2, domain 6 592 976 1.7E-171 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Pfam PF04560 RNA polymerase Rpb2, domain 7 978 1052 1.7E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Pfam PF10385 RNA polymerase beta subunit external 1 domain 462 529 6.5E-29 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 SUPERFAMILY SSF64484 14 1063 0.0 T 14-10-2018 Tph_c25930 b7e725c73f8bc26488a54f5184fe00d2 1186 Pfam PF04563 RNA polymerase beta subunit 29 369 4.7E-32 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Tph_c23470 1056a41abff20efec54f242cdc55a5bf 125 Gene3D G3DSA:1.10.10.10 33 83 1.3E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c23470 1056a41abff20efec54f242cdc55a5bf 125 Hamap MF_00674 UPF0251 protein . 2 98 21.475 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 Tph_c23470 1056a41abff20efec54f242cdc55a5bf 125 SUPERFAMILY SSF88659 35 79 1.07E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c23470 1056a41abff20efec54f242cdc55a5bf 125 Pfam PF02001 Protein of unknown function DUF134 2 95 5.4E-21 T 14-10-2018 IPR002852 Uncharacterised protein family UPF0251 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 146 249 2.0E-45 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 SMART SM00448 5 120 5.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 3 256 4.5E-123 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 Gene3D G3DSA:1.10.10.10 140 256 1.5E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 Gene3D G3DSA:3.40.50.2300 2 139 1.6E-33 T 14-10-2018 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 146 254 2.0E-51 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 SUPERFAMILY SSF46894 140 252 1.02E-47 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 Pfam PF00072 Response regulator receiver domain 7 120 1.9E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 PIRSF PIRSF002937 1 256 4.7E-117 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 Tph_c16200 22e3a42da99ffdf771a11f6dff685a81 256 SUPERFAMILY SSF52172 3 134 2.56E-35 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c17000 0a7ad92003494a0de50af9cc42cfec1c 273 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 15 109 1.1E-8 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 Tph_c17000 0a7ad92003494a0de50af9cc42cfec1c 273 Gene3D G3DSA:3.40.50.620 1 194 2.1E-27 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c17000 0a7ad92003494a0de50af9cc42cfec1c 273 SUPERFAMILY SSF52402 12 129 3.97E-22 T 14-10-2018 Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.3E-17 T 14-10-2018 Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 SUPERFAMILY SSF54292 2 112 4.74E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 Pfam PF14697 4Fe-4S dicluster domain 120 178 1.3E-9 T 14-10-2018 Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 164 175 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 Gene3D G3DSA:3.30.70.20 108 182 7.3E-13 T 14-10-2018 Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 Gene3D G3DSA:3.10.20.740 1 107 2.0E-30 T 14-10-2018 Tph_c08260 fef40daa3e1559e84d9a1607a1c84a24 253 SUPERFAMILY SSF54862 89 182 5.72E-13 T 14-10-2018 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 SUPERFAMILY SSF53448 2 280 1.1E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Gene3D G3DSA:3.40.120.10 384 523 3.9E-19 T 14-10-2018 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Gene3D G3DSA:3.40.120.10 629 730 6.9E-19 T 14-10-2018 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Gene3D G3DSA:2.160.10.10 244 383 1.1E-17 T 14-10-2018 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 SUPERFAMILY SSF51161 241 378 1.39E-29 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 383 507 2.1E-14 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 SUPERFAMILY SSF53738 531 630 1.06E-6 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 SUPERFAMILY SSF53738 377 511 3.06E-15 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Gene3D G3DSA:3.40.120.10 543 726 6.9E-19 T 14-10-2018 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 276 304 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Gene3D G3DSA:3.30.310.50 739 821 7.1E-9 T 14-10-2018 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 531 628 3.0E-8 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Gene3D G3DSA:3.90.550.10 1 243 2.3E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 300 1.4E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 Pfam PF00483 Nucleotidyl transferase 2 232 1.3E-51 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Tph_c09090 cbee1b720e002d1e6b456d55f36ea513 828 SUPERFAMILY SSF55957 737 821 1.18E-15 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 SMART SM00671 408 443 1.9E-5 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 SMART SM00671 444 479 1.2E-7 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 SMART SM00671 480 515 3.0E-8 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 SUPERFAMILY SSF81901 390 523 1.28E-32 T 14-10-2018 Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 Gene3D G3DSA:1.25.40.10 350 544 8.8E-44 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 Pfam PF08238 Sel1 repeat 410 443 7.5E-6 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 Pfam PF08238 Sel1 repeat 481 515 1.2E-7 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 Pfam PF08238 Sel1 repeat 444 479 2.7E-6 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c07580 feec86b975d81cec7b4888b2d330c480 591 Pfam PF08238 Sel1 repeat 391 407 160.0 T 14-10-2018 IPR006597 Sel1-like repeat Tph_c23340 182cb7eb15ed334fd2c0fbb035269535 489 Pfam PF00665 Integrase core domain 128 253 2.4E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c23340 182cb7eb15ed334fd2c0fbb035269535 489 SUPERFAMILY SSF46689 11 111 3.05E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c23340 182cb7eb15ed334fd2c0fbb035269535 489 Gene3D G3DSA:1.10.260.40 1 49 1.5E-5 T 14-10-2018 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 258 9.8E-48 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 SMART SM00936 280 365 3.7E-7 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 Gene3D G3DSA:2.60.410.10 278 365 7.1E-16 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 SUPERFAMILY SSF56601 9 275 1.11E-53 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 Gene3D G3DSA:3.40.710.10 19 275 9.0E-69 T 14-10-2018 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 3.2E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 3.2E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 3.2E-11 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 365 3.0E-11 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c11390 e54bf8d940a3c53efe99c2e9c5f149f9 366 SUPERFAMILY SSF69189 280 366 5.49E-14 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 SUPERFAMILY SSF47384 228 312 1.0E-22 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 311 2.2E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 Pfam PF00672 HAMP domain 192 241 3.1E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 SUPERFAMILY SSF55874 300 466 5.5E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 SMART SM00304 192 244 3.4E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 SMART SM00387 357 469 1.5E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 SMART SM00388 245 311 8.6E-24 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 Gene3D G3DSA:1.10.8.500 190 239 5.7E-12 T 14-10-2018 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 2.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 2.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 2.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 2.8E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 466 5.6E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 Gene3D G3DSA:3.30.565.10 316 468 1.7E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 SUPERFAMILY SSF158472 192 241 8.11E-12 T 14-10-2018 Tph_c01860 2d8c6ef1762fbc3ed734483f0ef0f0b7 470 Gene3D G3DSA:1.10.287.130 240 315 8.5E-25 T 14-10-2018 Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 Gene3D G3DSA:3.30.1490.70 22 199 1.5E-43 T 14-10-2018 Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 SUPERFAMILY SSF56091 12 201 1.01E-36 T 14-10-2018 Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 Pfam PF04679 ATP dependent DNA ligase C terminal region 218 304 7.6E-17 T 14-10-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 SUPERFAMILY SSF50249 207 303 6.85E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 Pfam PF01068 ATP dependent DNA ligase domain 27 201 2.0E-28 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 Gene3D G3DSA:3.30.470.30 37 157 1.5E-43 T 14-10-2018 Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 21 307 1.1E-71 T 14-10-2018 IPR014146 DNA ligase D, ligase domain Tph_c09930 f3309eaa291275ea7c41dfd4ba93ac67 320 Gene3D G3DSA:2.40.50.140 204 314 6.6E-21 T 14-10-2018 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 SMART SM00421 152 209 2.4E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 Gene3D G3DSA:3.40.50.12740 4 215 1.1E-71 T 14-10-2018 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 SMART SM00448 4 116 6.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 SUPERFAMILY SSF46894 142 215 2.28E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 4.4E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 Pfam PF00072 Response regulator receiver domain 6 117 7.4E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c05420 41ceb1dccc000c86eaa2e977f5e394ae 217 SUPERFAMILY SSF52172 3 134 4.55E-34 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 648 665 6.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 665 685 6.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 SMART SM00091 241 308 7.5E-6 T 14-10-2018 IPR000014 PAS domain Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Gene3D G3DSA:1.10.10.60 641 684 3.9E-15 T 14-10-2018 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 452 467 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Gene3D G3DSA:3.40.50.300 354 536 2.5E-63 T 14-10-2018 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Gene3D G3DSA:3.30.450.20 251 353 4.1E-13 T 14-10-2018 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Pfam PF02954 Bacterial regulatory protein, Fis family 641 680 4.2E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 SUPERFAMILY SSF55785 231 340 3.84E-10 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Pfam PF00158 Sigma-54 interaction domain 366 532 1.5E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 390 403 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Gene3D G3DSA:3.30.450.40 47 234 7.6E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 Gene3D G3DSA:1.10.8.60 537 604 5.9E-19 T 14-10-2018 Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 SUPERFAMILY SSF52540 366 610 6.41E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 SMART SM00382 386 536 7.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 579 588 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c00530 d9afe582d50ef0787964bd835e6e9f51 704 SUPERFAMILY SSF46689 579 684 1.14E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 Pfam PF07568 Histidine kinase 288 360 2.6E-20 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 SMART SM00911 288 372 0.0013 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 Pfam PF13426 PAS domain 172 271 1.0E-4 T 14-10-2018 IPR000014 PAS domain Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 SUPERFAMILY SSF55874 342 482 2.88E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 Gene3D G3DSA:3.30.450.280 10 134 7.2E-13 T 14-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 SUPERFAMILY SSF55785 172 279 3.84E-7 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 Gene3D G3DSA:3.30.450.20 144 274 1.0E-12 T 14-10-2018 Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 Gene3D G3DSA:3.30.565.10 343 487 2.3E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c06910 c449dc96e8f8fbb42d30fefd2cef753a 489 Pfam PF12282 Signal transduction histidine kinase 14 148 2.1E-30 T 14-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal Tph_c17340 ae9326ba4856197ee29b645f1d57ab33 407 Gene3D G3DSA:3.40.50.300 4 221 6.7E-35 T 14-10-2018 Tph_c17340 ae9326ba4856197ee29b645f1d57ab33 407 Gene3D G3DSA:1.10.8.80 266 350 2.2E-7 T 14-10-2018 Tph_c17340 ae9326ba4856197ee29b645f1d57ab33 407 SMART SM00382 31 225 3.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17340 ae9326ba4856197ee29b645f1d57ab33 407 SUPERFAMILY SSF52540 23 332 1.82E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14480 e566c25e3d97713bffff496488c41535 313 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 303 3.7E-100 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 149 4.0E-48 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 4.4E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 4.4E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 298 4.4E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 219 228 4.4E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 80 89 4.4E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 4.4E-33 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14480 e566c25e3d97713bffff496488c41535 313 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 Gene3D G3DSA:3.40.50.1370 136 282 4.6E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 3.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 3.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 3.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 3.1E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 302 1.3E-27 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 Gene3D G3DSA:3.40.50.1370 11 298 4.6E-98 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 SUPERFAMILY SSF53671 3 304 1.31E-100 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tph_c14480 e566c25e3d97713bffff496488c41535 313 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 5 305 41.394 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 SUPERFAMILY SSF52540 4 233 4.98E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 498 3.0E-172 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 SUPERFAMILY SSF52317 253 459 1.58E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 Gene3D G3DSA:3.40.50.880 251 444 3.3E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 Gene3D G3DSA:3.40.50.300 3 235 7.1E-57 T 14-10-2018 Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 227 4.9E-22 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 449 1.6E-59 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Tph_c05300 d0eef26d34088c9f712c5eae3f15eef1 514 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 506 190.698 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Tph_c22350 893fc548d6d1425e74e9407c97cb23c0 397 SUPERFAMILY SSF51556 54 349 1.11E-49 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c22350 893fc548d6d1425e74e9407c97cb23c0 397 Gene3D G3DSA:3.20.20.140 55 345 3.4E-124 T 14-10-2018 Tph_c22350 893fc548d6d1425e74e9407c97cb23c0 397 SUPERFAMILY SSF51338 3 382 3.09E-19 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c22350 893fc548d6d1425e74e9407c97cb23c0 397 Gene3D G3DSA:2.30.40.10 6 379 3.4E-124 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c22350 893fc548d6d1425e74e9407c97cb23c0 397 Pfam PF01979 Amidohydrolase family 51 379 1.5E-20 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c03640 fabf8ebe665d67eced5b61aa0354cfb7 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 230 8.9E-60 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tph_c03640 fabf8ebe665d67eced5b61aa0354cfb7 323 Gene3D G3DSA:3.40.50.720 3 249 1.6E-108 T 14-10-2018 Tph_c03640 fabf8ebe665d67eced5b61aa0354cfb7 323 SUPERFAMILY SSF51735 1 317 3.58E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c03640 fabf8ebe665d67eced5b61aa0354cfb7 323 Gene3D G3DSA:3.90.25.10 173 314 1.6E-108 T 14-10-2018 Tph_c05900 61b582eb0b260e6c923e2d59be067040 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 174 4.8E-16 T 14-10-2018 Tph_c05900 61b582eb0b260e6c923e2d59be067040 217 Gene3D G3DSA:3.40.50.1000 4 194 2.0E-29 T 14-10-2018 IPR023214 HAD superfamily Tph_c05900 61b582eb0b260e6c923e2d59be067040 217 Gene3D G3DSA:1.10.150.240 15 80 2.0E-29 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Tph_c05900 61b582eb0b260e6c923e2d59be067040 217 SUPERFAMILY SSF56784 4 203 6.16E-34 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c05900 61b582eb0b260e6c923e2d59be067040 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 168 8.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09580 8520b65ce6fc2a02a6fc3b4b99bb3e70 246 PIRSF PIRSF000883 1 246 5.7E-60 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 Tph_c09580 8520b65ce6fc2a02a6fc3b4b99bb3e70 246 SUPERFAMILY SSF56300 2 246 4.48E-58 T 14-10-2018 Tph_c09580 8520b65ce6fc2a02a6fc3b4b99bb3e70 246 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 210 1.4E-30 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Tph_c09580 8520b65ce6fc2a02a6fc3b4b99bb3e70 246 Gene3D G3DSA:3.60.21.10 1 246 2.2E-71 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c28890 1198c93ffecd89a2732a25f6f7015e23 249 SUPERFAMILY SSF52518 16 238 2.47E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c28890 1198c93ffecd89a2732a25f6f7015e23 249 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 60 208 2.5E-25 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tph_c28890 1198c93ffecd89a2732a25f6f7015e23 249 Gene3D G3DSA:3.40.50.970 82 234 1.9E-24 T 14-10-2018 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 SUPERFAMILY SSF46785 4 71 2.37E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 Gene3D G3DSA:1.10.10.10 3 69 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 8.1E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 155 167 8.1E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 8.1E-10 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 Pfam PF00717 Peptidase S24-like 120 182 4.2E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 SUPERFAMILY SSF51306 77 198 6.98E-37 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 Gene3D G3DSA:2.10.109.10 83 200 4.7E-43 T 14-10-2018 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 Pfam PF01726 LexA DNA binding domain 3 66 1.8E-27 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 Hamap MF_00015 LexA repressor [lexA]. 4 200 34.949 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Tph_c13670 1c8c3a1bba3396be8f362373533693ee 201 TIGRFAM TIGR00498 lexA: repressor LexA 3 200 1.2E-75 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 17 80 5.4E-18 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 Pfam PF00403 Heavy-metal-associated domain 18 79 1.4E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 Gene3D G3DSA:3.30.70.100 12 81 1.1E-22 T 14-10-2018 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 ProSitePatterns PS01047 Heavy-metal-associated domain. 21 50 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 SUPERFAMILY SSF55008 13 81 1.83E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 PRINTS PR00944 Copper ion binding protein signature 16 28 9.9E-7 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 PRINTS PR00944 Copper ion binding protein signature 41 54 9.9E-7 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 PRINTS PR00944 Copper ion binding protein signature 28 41 9.9E-7 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Tph_c12810 0061ac0e6186080ee14da436402b086a 82 PRINTS PR00944 Copper ion binding protein signature 67 80 9.9E-7 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 Gene3D G3DSA:3.10.580.10 1 117 6.5E-33 T 14-10-2018 Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 119 276 1.3E-20 T 14-10-2018 IPR000160 GGDEF domain Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 Pfam PF00571 CBS domain 62 112 5.5E-13 T 14-10-2018 IPR000644 CBS domain Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 Pfam PF00571 CBS domain 4 54 9.0E-15 T 14-10-2018 IPR000644 CBS domain Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 SMART SM00116 69 116 7.3E-8 T 14-10-2018 IPR000644 CBS domain Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 SMART SM00116 11 58 6.0E-9 T 14-10-2018 IPR000644 CBS domain Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 SUPERFAMILY SSF55073 122 275 3.27E-23 T 14-10-2018 IPR029787 Nucleotide cyclase Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 Pfam PF00990 Diguanylate cyclase, GGDEF domain 119 272 7.0E-21 T 14-10-2018 IPR000160 GGDEF domain Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 Gene3D G3DSA:3.30.70.270 118 284 1.2E-26 T 14-10-2018 Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 SUPERFAMILY SSF54631 2 115 1.16E-33 T 14-10-2018 Tph_c08930 f0fe4ea10e5e878dae0f97928f96a8cc 287 SMART SM00267 108 278 1.0E-16 T 14-10-2018 IPR000160 GGDEF domain Tph_c16170 67708e7aae5ce8c3d2b515afc2a78be9 227 Pfam PF00535 Glycosyl transferase family 2 3 119 3.6E-23 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Tph_c16170 67708e7aae5ce8c3d2b515afc2a78be9 227 Gene3D G3DSA:3.90.550.10 1 224 3.2E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c16170 67708e7aae5ce8c3d2b515afc2a78be9 227 SUPERFAMILY SSF53448 2 192 5.91E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c22500 6cafd99a6d7e1f9a349d6d8080a99a3b 290 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 93 104 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c22500 6cafd99a6d7e1f9a349d6d8080a99a3b 290 Gene3D G3DSA:3.30.70.20 62 108 4.4E-10 T 14-10-2018 Tph_c22500 6cafd99a6d7e1f9a349d6d8080a99a3b 290 SUPERFAMILY SSF52540 1 281 7.21E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c22500 6cafd99a6d7e1f9a349d6d8080a99a3b 290 Pfam PF00037 4Fe-4S binding domain 62 84 5.5E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c22500 6cafd99a6d7e1f9a349d6d8080a99a3b 290 Pfam PF00037 4Fe-4S binding domain 87 109 1.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c22500 6cafd99a6d7e1f9a349d6d8080a99a3b 290 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 259 5.4E-16 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 Hamap MF_00625 Selenide, water dikinase [selD]. 1 307 36.308 T 14-10-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 Pfam PF00586 AIR synthase related protein, N-terminal domain 8 115 5.2E-19 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 SUPERFAMILY SSF55326 4 118 1.96E-37 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 PIRSF PIRSF036407 1 308 9.2E-112 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 Gene3D G3DSA:3.30.1330.10 1 121 1.1E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 Gene3D G3DSA:3.90.650.10 122 308 5.8E-60 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 SUPERFAMILY SSF56042 121 304 4.19E-51 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 TIGRFAM TIGR00476 selD: selenide, water dikinase 1 273 2.9E-109 T 14-10-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 Tph_c00670 8f37143f516d3a30034c8cdda1901fd8 309 Pfam PF02769 AIR synthase related protein, C-terminal domain 128 306 1.2E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tph_c12840 5096e740becbf9a42fc2dabe448ba282 141 Pfam PF04472 Cell division protein SepF 52 121 2.2E-25 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 Tph_c12840 5096e740becbf9a42fc2dabe448ba282 141 Hamap MF_01197 Cell division protein SepF [sepF]. 2 131 17.135 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 Tph_c12840 5096e740becbf9a42fc2dabe448ba282 141 Gene3D G3DSA:3.30.110.150 47 127 2.5E-26 T 14-10-2018 IPR038594 SepF-like superfamily Tph_c23360 02e60336f962cda87108d267d3f5c335 143 Gene3D G3DSA:1.10.10.2600 1 90 2.3E-10 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c03140 31092e966f8ad9d32e04d38f4ad67f86 92 SUPERFAMILY SSF89447 4 61 3.31E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c03140 31092e966f8ad9d32e04d38f4ad67f86 92 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 44 8.2E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c03140 31092e966f8ad9d32e04d38f4ad67f86 92 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 47 1.5E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c03140 31092e966f8ad9d32e04d38f4ad67f86 92 SMART SM00966 5 50 4.5E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c03140 31092e966f8ad9d32e04d38f4ad67f86 92 Gene3D G3DSA:2.10.260.10 3 43 1.9E-9 T 14-10-2018 Tph_c25560 4e5c6d515080573d1e9b51ab8fe3a82c 111 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 111 1.7E-45 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25560 4e5c6d515080573d1e9b51ab8fe3a82c 111 SUPERFAMILY SSF64263 2 111 1.57E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25560 4e5c6d515080573d1e9b51ab8fe3a82c 111 ProSitePatterns PS01167 Ribosomal protein L17 signature. 29 51 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25560 4e5c6d515080573d1e9b51ab8fe3a82c 111 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 111 25.726 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25560 4e5c6d515080573d1e9b51ab8fe3a82c 111 Gene3D G3DSA:3.90.1030.10 1 111 1.8E-46 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25560 4e5c6d515080573d1e9b51ab8fe3a82c 111 Pfam PF01196 Ribosomal protein L17 16 111 1.3E-39 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c16570 fb9364e6b7e590cd364fbc9233386cf4 367 PIRSF PIRSF019169 1 366 5.0E-67 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tph_c16570 fb9364e6b7e590cd364fbc9233386cf4 367 SUPERFAMILY SSF53067 182 362 2.01E-19 T 14-10-2018 Tph_c16570 fb9364e6b7e590cd364fbc9233386cf4 367 Pfam PF11104 Type IV pilus assembly protein PilM; 265 364 1.4E-7 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tph_c16570 fb9364e6b7e590cd364fbc9233386cf4 367 Pfam PF11104 Type IV pilus assembly protein PilM; 17 240 3.7E-26 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tph_c16570 fb9364e6b7e590cd364fbc9233386cf4 367 SUPERFAMILY SSF53067 74 173 6.8E-12 T 14-10-2018 Tph_c16570 fb9364e6b7e590cd364fbc9233386cf4 367 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 12 365 1.4E-51 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM Tph_c16420 bf3566501897eea6205da8ef750d98fb 404 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 77 396 4.0E-100 T 14-10-2018 IPR014194 Sporulation stage III, protein AE Tph_c16420 bf3566501897eea6205da8ef750d98fb 404 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 15 395 2.4E-105 T 14-10-2018 IPR014194 Sporulation stage III, protein AE Tph_c16030 0537c8f84aed9dea832b416c56fda874 146 Gene3D G3DSA:3.30.565.10 3 141 1.2E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c16030 0537c8f84aed9dea832b416c56fda874 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 3 140 34.672 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Tph_c16030 0537c8f84aed9dea832b416c56fda874 146 Pfam PF13581 Histidine kinase-like ATPase domain 13 136 1.5E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c16030 0537c8f84aed9dea832b416c56fda874 146 SMART SM00387 37 140 1.7E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c16030 0537c8f84aed9dea832b416c56fda874 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 3 137 6.1E-44 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Tph_c16030 0537c8f84aed9dea832b416c56fda874 146 SUPERFAMILY SSF55874 30 135 1.14E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 PIRSF PIRSF005639 1 184 1.7E-66 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 ProSitePatterns PS01236 PdxT/SNO family family signature. 33 43 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 Gene3D G3DSA:3.40.50.880 1 184 1.9E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 1 179 32.86 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 Pfam PF01174 SNO glutamine amidotransferase family 1 180 7.5E-58 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 1 178 1.5E-66 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Tph_c00150 15b3483e1d548cdfad9b54f3e4c4579b 184 SUPERFAMILY SSF52317 2 180 7.1E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c19750 49386050704cc9a2d34d69ed0467438a 263 PIRSF PIRSF004793 6 262 2.3E-84 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 Tph_c19750 49386050704cc9a2d34d69ed0467438a 263 Gene3D G3DSA:3.40.1700.10 102 255 4.3E-57 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Tph_c19750 49386050704cc9a2d34d69ed0467438a 263 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 15 249 7.7E-74 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Tph_c19750 49386050704cc9a2d34d69ed0467438a 263 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 237 4.9E-43 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Tph_c19750 49386050704cc9a2d34d69ed0467438a 263 SUPERFAMILY SSF143597 41 238 1.57E-64 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Tph_c19750 49386050704cc9a2d34d69ed0467438a 263 Hamap MF_01499 Diadenylate cyclase [dacA]. 3 255 33.156 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 Tph_c18130 7d4f3571a78f9a2f0dc148c81bed56d2 264 Gene3D G3DSA:3.40.50.620 8 263 3.5E-79 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c18130 7d4f3571a78f9a2f0dc148c81bed56d2 264 SUPERFAMILY SSF52402 25 261 4.89E-70 T 14-10-2018 Tph_c18130 7d4f3571a78f9a2f0dc148c81bed56d2 264 Pfam PF02540 NAD synthase 28 259 7.1E-73 T 14-10-2018 IPR022310 NAD/GMP synthase Tph_c18130 7d4f3571a78f9a2f0dc148c81bed56d2 264 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 25 262 46.697 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 Tph_c18130 7d4f3571a78f9a2f0dc148c81bed56d2 264 TIGRFAM TIGR00552 nadE: NAD+ synthetase 25 260 9.2E-76 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 Pfam PF13408 Recombinase zinc beta ribbon domain 314 373 4.5E-13 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 SMART SM00857 22 171 1.6E-51 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 Pfam PF07508 Recombinase 191 296 7.4E-27 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 Gene3D G3DSA:1.10.10.2600 156 298 1.1E-24 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 Gene3D G3DSA:3.40.50.1390 17 152 3.5E-49 T 14-10-2018 Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 Pfam PF00239 Resolvase, N terminal domain 22 170 2.8E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c22990 e9464b4af0266be833026df1f0c77b1a 522 SUPERFAMILY SSF53041 21 171 2.75E-36 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Pfam PF00391 PEP-utilising enzyme, mobile domain 419 500 1.0E-27 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Gene3D G3DSA:3.30.470.20 243 340 3.3E-43 T 14-10-2018 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Gene3D G3DSA:3.50.30.10 382 506 4.2E-79 T 14-10-2018 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 SUPERFAMILY SSF52009 388 509 6.93E-38 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 SUPERFAMILY SSF51621 508 876 1.6E-124 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 517 875 3.0E-94 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 765 783 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 PIRSF PIRSF000853 2 884 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Gene3D G3DSA:1.10.189.10 344 526 4.2E-79 T 14-10-2018 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 447 458 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Gene3D G3DSA:3.30.1490.20 11 242 4.5E-103 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Gene3D G3DSA:1.20.80.30 110 197 4.5E-103 T 14-10-2018 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Gene3D G3DSA:3.20.20.60 529 876 2.8E-150 T 14-10-2018 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 SUPERFAMILY SSF56059 3 377 2.12E-145 T 14-10-2018 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 876 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 55 291 1.5E-37 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 53 5.4E-10 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tph_c05800 edd3ed95546060905290423bfea1a10d 886 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 302 355 1.8E-10 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Gene3D G3DSA:3.30.10.20 404 468 1.1E-15 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Pfam PF03793 PASTA domain 475 534 3.8E-14 T 14-10-2018 IPR005543 PASTA domain Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Pfam PF03793 PASTA domain 337 399 3.2E-13 T 14-10-2018 IPR005543 PASTA domain Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Pfam PF03793 PASTA domain 410 465 1.7E-10 T 14-10-2018 IPR005543 PASTA domain Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 PIRSF PIRSF000615 21 284 1.8E-14 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Pfam PF00069 Protein kinase domain 10 261 1.5E-56 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Gene3D G3DSA:3.30.10.20 471 538 3.5E-18 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Gene3D G3DSA:3.30.10.20 334 401 3.1E-16 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 SUPERFAMILY SSF54184 337 398 3.92E-6 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 SMART SM00740 400 466 1.9E-8 T 14-10-2018 IPR005543 PASTA domain Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 SMART SM00740 469 536 3.5E-12 T 14-10-2018 IPR005543 PASTA domain Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 SMART SM00740 333 399 1.7E-13 T 14-10-2018 IPR005543 PASTA domain Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Gene3D G3DSA:3.30.200.20 1 89 3.1E-32 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 SUPERFAMILY SSF56112 7 295 1.62E-84 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 Gene3D G3DSA:1.10.510.10 91 273 3.0E-56 T 14-10-2018 Tph_c14230 997276c0cf1e732bb1b607173e7043d3 609 SMART SM00220 10 273 4.4E-74 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 Gene3D G3DSA:3.40.50.280 80 209 2.2E-49 T 14-10-2018 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 Gene3D G3DSA:1.10.1240.10 1 79 9.3E-30 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 SMART SM01018 1 81 4.2E-29 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 TIGRFAM TIGR02370 pyl_corrinoid: methyltransferase cognate corrinoid proteins, Methanosarcina family 3 198 6.9E-75 T 14-10-2018 IPR012741 Methyltransferase cognate corrinoid protein GO:0015948|GO:0031419|GO:0050897 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 SUPERFAMILY SSF52242 66 208 3.01E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 Pfam PF02607 B12 binding domain 2 74 1.2E-21 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 Pfam PF02310 B12 binding domain 87 199 4.3E-27 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27670 0eb52143ec7aba160f8ccddecc3acdad 210 SUPERFAMILY SSF47644 2 78 2.35E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c22810 fbd741149ae0ceca05a5c76d7ad1e8f6 211 SUPERFAMILY SSF144010 3 209 2.48E-33 T 14-10-2018 Tph_c22810 fbd741149ae0ceca05a5c76d7ad1e8f6 211 Pfam PF01996 F420-0:Gamma-glutamyl ligase 9 70 2.0E-9 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Tph_c22810 fbd741149ae0ceca05a5c76d7ad1e8f6 211 Gene3D G3DSA:3.30.1330.100 1 78 4.4E-9 T 14-10-2018 Tph_c23900 35aa80c81628db332cfbec12c2898bec 420 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 409 2.7E-94 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit Tph_c23900 35aa80c81628db332cfbec12c2898bec 420 PIRSF PIRSF006066 1 420 1.4E-117 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tph_c23900 35aa80c81628db332cfbec12c2898bec 420 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 414 2.0E-111 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 Tph_c25000 78529ca6c6db515aacac53222615c6a5 451 Gene3D G3DSA:3.40.190.10 104 427 3.9E-152 T 14-10-2018 Tph_c25000 78529ca6c6db515aacac53222615c6a5 451 Gene3D G3DSA:3.90.76.10 1 103 3.9E-152 T 14-10-2018 Tph_c25000 78529ca6c6db515aacac53222615c6a5 451 PIRSF PIRSF002741 1 446 1.1E-129 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c25000 78529ca6c6db515aacac53222615c6a5 451 Gene3D G3DSA:3.10.105.10 194 412 3.9E-152 T 14-10-2018 Tph_c25000 78529ca6c6db515aacac53222615c6a5 451 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 1 349 4.6E-99 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c25000 78529ca6c6db515aacac53222615c6a5 451 SUPERFAMILY SSF53850 1 443 5.43E-133 T 14-10-2018 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 153 4.0E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 Gene3D G3DSA:3.30.390.50 243 327 8.3E-18 T 14-10-2018 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 Gene3D G3DSA:3.30.930.10 4 242 2.7E-78 T 14-10-2018 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 SUPERFAMILY SSF82649 242 308 8.89E-17 T 14-10-2018 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 6 306 5.4E-93 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 242 304 2.7E-15 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Tph_c19490 5c8ff5648d19211b4244fe659c07550b 329 SUPERFAMILY SSF55681 7 240 5.61E-74 T 14-10-2018 Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 Gene3D G3DSA:3.40.80.10 4 196 2.8E-54 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 SUPERFAMILY SSF55846 2 182 4.19E-42 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 SUPERFAMILY SSF54106 285 333 1.83E-10 T 14-10-2018 Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 Gene3D G3DSA:3.10.350.10 284 333 8.3E-19 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 Pfam PF01476 LysM domain 288 333 8.8E-15 T 14-10-2018 IPR018392 LysM domain Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 149 4.4E-19 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 SMART SM00644 8 169 2.7E-20 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c23010 0c8c81be33d4c8e7a6cfa7fe221c8dca 334 SMART SM00257 287 333 3.8E-12 T 14-10-2018 IPR018392 LysM domain Tph_c03080 54178080eb660dc19029fa733c349b33 109 Pfam PF01850 PIN domain 7 99 7.0E-6 T 14-10-2018 IPR002716 PIN domain Tph_c03080 54178080eb660dc19029fa733c349b33 109 SUPERFAMILY SSF88723 7 97 1.21E-9 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c03080 54178080eb660dc19029fa733c349b33 109 Gene3D G3DSA:3.40.50.1010 5 105 5.7E-8 T 14-10-2018 Tph_c23720 a46ec1b1e821ece30b0ba0c28534d659 299 SUPERFAMILY SSF103481 193 289 2.35E-13 T 14-10-2018 Tph_c23720 a46ec1b1e821ece30b0ba0c28534d659 299 SUPERFAMILY SSF103481 42 146 2.75E-13 T 14-10-2018 Tph_c23720 a46ec1b1e821ece30b0ba0c28534d659 299 Pfam PF00892 EamA-like transporter family 155 289 1.2E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c23720 a46ec1b1e821ece30b0ba0c28534d659 299 Pfam PF00892 EamA-like transporter family 12 142 3.7E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c02500 4c546066b3e8e234d0f765fd03be0985 635 Gene3D G3DSA:1.25.40.10 328 453 1.0E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c02500 4c546066b3e8e234d0f765fd03be0985 635 SUPERFAMILY SSF48452 10 435 3.24E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c02500 4c546066b3e8e234d0f765fd03be0985 635 Pfam PF14559 Tetratricopeptide repeat 352 411 2.4E-6 T 14-10-2018 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 Pfam PF00137 ATP synthase subunit C 10 73 6.3E-17 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 15.638 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 SUPERFAMILY SSF81333 3 76 4.32E-20 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.1E-19 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.1E-19 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.1E-19 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 74 7.2E-20 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27420 6cae01ab9cc2e3d27cae7e209977c90c 78 Gene3D G3DSA:1.20.20.10 1 75 4.9E-27 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 225 287 1.8E-11 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 224 305 1.5E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 Gene3D G3DSA:3.40.50.300 1 307 2.6E-90 T 14-10-2018 Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 Pfam PF00005 ABC transporter 22 174 5.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 SMART SM00382 30 223 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03560 8d46d38ef461c94685508f2ab4f135b8 307 SUPERFAMILY SSF52540 3 244 6.56E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03020 b1e658947df3d42b10f206477f682de5 229 Pfam PF04191 Phospholipid methyltransferase 1 66 1.2E-12 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Tph_c03020 b1e658947df3d42b10f206477f682de5 229 SUPERFAMILY SSF81301 140 227 1.43E-15 T 14-10-2018 Tph_c03020 b1e658947df3d42b10f206477f682de5 229 Pfam PF01909 Nucleotidyltransferase domain 138 200 2.8E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c03020 b1e658947df3d42b10f206477f682de5 229 Gene3D G3DSA:3.30.460.10 114 224 6.3E-13 T 14-10-2018 Tph_c03020 b1e658947df3d42b10f206477f682de5 229 Gene3D G3DSA:1.20.120.1630 1 73 5.2E-21 T 14-10-2018 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Gene3D G3DSA:3.40.50.620 126 433 1.6E-179 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 SMART SM01016 4 97 1.5E-30 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Hamap MF_00123 Arginine--tRNA ligase [argS]. 12 555 27.051 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 SUPERFAMILY SSF55190 27 117 1.18E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Gene3D G3DSA:3.30.1360.70 6 117 1.8E-22 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Gene3D G3DSA:1.10.730.10 434 555 1.6E-179 T 14-10-2018 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 SUPERFAMILY SSF47323 434 555 1.96E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 20 97 2.4E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 6.7E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 PRINTS PR01038 Arginyl-tRNA synthetase signature 165 178 6.7E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 PRINTS PR01038 Arginyl-tRNA synthetase signature 141 157 6.7E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 PRINTS PR01038 Arginyl-tRNA synthetase signature 126 141 6.7E-21 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 SMART SM00836 439 555 1.2E-53 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Pfam PF00750 tRNA synthetases class I (R) 123 182 4.0E-8 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Pfam PF00750 tRNA synthetases class I (R) 273 407 7.1E-9 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 14 555 1.2E-140 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 SUPERFAMILY SSF52374 120 450 1.07E-96 T 14-10-2018 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 136 145 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c27890 4d3d909bf6c00a453badf758c3ef61bd 555 Pfam PF05746 DALR anticodon binding domain 439 555 2.0E-35 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 Pfam PF12840 Helix-turn-helix domain 1 55 7.1E-13 T 14-10-2018 Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 1 16 5.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 5.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 49 5.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 SUPERFAMILY SSF46785 1 76 6.27E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 SMART SM00418 1 78 1.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c17710 7a603da2dd3cac0f4da2fa9326aaf259 78 Gene3D G3DSA:1.10.10.10 1 77 3.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c24630 e7e66c166d9551691a058664b881e198 143 Gene3D G3DSA:3.30.420.10 1 143 2.4E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c24630 e7e66c166d9551691a058664b881e198 143 Pfam PF00075 RNase H 2 140 9.3E-48 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Tph_c24630 e7e66c166d9551691a058664b881e198 143 Hamap MF_00042 Ribonuclease H [rnhA]. 1 143 31.791 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 Tph_c24630 e7e66c166d9551691a058664b881e198 143 SUPERFAMILY SSF53098 1 142 1.39E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c10330 b615dee09df3a5e90512e622cc9bcb59 369 Gene3D G3DSA:1.10.3210.10 1 294 3.5E-74 T 14-10-2018 Tph_c10330 b615dee09df3a5e90512e622cc9bcb59 369 Pfam PF13487 HD domain 181 243 1.5E-16 T 14-10-2018 Tph_c10330 b615dee09df3a5e90512e622cc9bcb59 369 SUPERFAMILY SSF109604 113 292 1.34E-35 T 14-10-2018 Tph_c10330 b615dee09df3a5e90512e622cc9bcb59 369 SMART SM00471 126 262 8.8E-11 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c10710 e46ffa6db2b12b6c1d55663bbf670af3 365 Gene3D G3DSA:3.40.50.450 1 290 4.1E-104 T 14-10-2018 Tph_c10710 e46ffa6db2b12b6c1d55663bbf670af3 365 SUPERFAMILY SSF102405 82 287 7.02E-46 T 14-10-2018 Tph_c10710 e46ffa6db2b12b6c1d55663bbf670af3 365 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 73 287 2.0E-77 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Tph_c10710 e46ffa6db2b12b6c1d55663bbf670af3 365 Pfam PF02481 DNA recombination-mediator protein A 74 278 4.6E-80 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 Tph_c10710 e46ffa6db2b12b6c1d55663bbf670af3 365 SUPERFAMILY SSF46785 283 357 5.66E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c10710 e46ffa6db2b12b6c1d55663bbf670af3 365 Gene3D G3DSA:1.10.10.10 291 359 1.4E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c15430 2f44a738e9b041064d2b06d20cc1fcb1 338 Pfam PF00348 Polyprenyl synthetase 48 289 7.7E-67 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tph_c15430 2f44a738e9b041064d2b06d20cc1fcb1 338 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 219 231 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tph_c15430 2f44a738e9b041064d2b06d20cc1fcb1 338 Gene3D G3DSA:1.10.600.10 13 337 1.4E-92 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c15430 2f44a738e9b041064d2b06d20cc1fcb1 338 SUPERFAMILY SSF48576 18 336 2.73E-81 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c15430 2f44a738e9b041064d2b06d20cc1fcb1 338 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 97 111 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 636 1.7E-214 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Gene3D G3DSA:3.90.740.10 195 401 8.5E-262 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 394 409 5.6E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 232 255 5.6E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 523 536 5.6E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.6E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 557 566 5.6E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 SUPERFAMILY SSF47323 648 927 3.55E-79 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 SUPERFAMILY SSF52374 2 643 7.89E-162 T 14-10-2018 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Pfam PF08264 Anticodon-binding domain of tRNA 681 836 2.6E-34 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 927 21.006 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Pfam PF06827 Zinc finger found in FPG and IleRS 896 925 6.9E-7 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Gene3D G3DSA:3.40.50.620 25 625 8.5E-262 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 Gene3D G3DSA:1.10.730.20 636 929 1.2E-103 T 14-10-2018 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 838 9.3E-303 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c12900 e9da3692bbac14764ce26421ca7f5c9d 935 SUPERFAMILY SSF50677 204 396 4.5E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Tph_c05960 4c15c6e4fb4ef386d98542ca690e959c 231 Gene3D G3DSA:3.40.140.10 107 231 2.7E-48 T 14-10-2018 Tph_c05960 4c15c6e4fb4ef386d98542ca690e959c 231 SUPERFAMILY SSF47781 29 97 5.56E-5 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c05960 4c15c6e4fb4ef386d98542ca690e959c 231 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 180 185 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site Tph_c05960 4c15c6e4fb4ef386d98542ca690e959c 231 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 231 3.9E-75 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 Tph_c05960 4c15c6e4fb4ef386d98542ca690e959c 231 SUPERFAMILY SSF102712 162 199 4.45E-5 T 14-10-2018 Tph_c05960 4c15c6e4fb4ef386d98542ca690e959c 231 Pfam PF04002 RadC-like JAB domain 110 230 3.4E-47 T 14-10-2018 IPR025657 RadC-like JAB domain Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 Pfam PF00764 Arginosuccinate synthase 7 391 4.9E-163 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 SUPERFAMILY SSF69864 171 397 9.68E-93 T 14-10-2018 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 391 2.7E-153 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 SUPERFAMILY SSF52402 4 202 8.38E-48 T 14-10-2018 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 397 54.414 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 Gene3D G3DSA:3.90.1260.10 64 352 8.5E-155 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 Gene3D G3DSA:3.40.50.620 6 172 8.5E-155 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c25430 5e1641371e5c0f95a0bcfa9d4d28baa8 400 Gene3D G3DSA:1.20.5.470 373 400 2.2E-13 T 14-10-2018 Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 8 488 7.3E-127 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 Pfam PF00460 Flagella basal body rod protein 8 38 2.1E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 426 488 9.3E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 SUPERFAMILY SSF64518 151 488 4.32E-28 T 14-10-2018 Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 1.6E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 PRINTS PR01005 Flagellar hook-associated protein signature 134 154 1.6E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tph_c05670 aa691e5c0479a0edf3cbb59d19ecd264 495 PRINTS PR01005 Flagellar hook-associated protein signature 167 191 1.6E-10 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 96 120 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 SMART SM01390 3 97 8.2E-55 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 SMART SM00363 98 160 1.5E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 Pfam PF01479 S4 domain 98 145 7.5E-23 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 Gene3D G3DSA:1.10.1050.10 6 208 3.3E-91 T 14-10-2018 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 97 6.5E-34 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 SUPERFAMILY SSF55174 3 208 3.53E-73 T 14-10-2018 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 Gene3D G3DSA:3.10.290.10 97 193 3.3E-91 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 37.716 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tph_c25580 e6598365dad7c52e4b894a9615cb62e9 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 8.7E-78 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tph_c10040 a96eed774950370cc2139ecfec65c6f2 200 Gene3D G3DSA:3.40.50.150 1 191 1.8E-53 T 14-10-2018 Tph_c10040 a96eed774950370cc2139ecfec65c6f2 200 PIRSF PIRSF004553 3 184 8.6E-47 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Tph_c10040 a96eed774950370cc2139ecfec65c6f2 200 Pfam PF03602 Conserved hypothetical protein 95 4 180 1.8E-46 T 14-10-2018 Tph_c10040 a96eed774950370cc2139ecfec65c6f2 200 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 4 182 4.8E-44 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Tph_c10040 a96eed774950370cc2139ecfec65c6f2 200 SUPERFAMILY SSF53335 4 162 8.23E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 Gene3D G3DSA:1.10.443.10 113 296 8.3E-59 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 Pfam PF00589 Phage integrase family 114 287 2.0E-42 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 303 7.8E-101 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 Gene3D G3DSA:1.10.150.130 6 109 9.3E-25 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 90 2.4E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 302 53.506 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Tph_c10740 75dd52f81bf6f8a59b56f941d122c2e4 309 SUPERFAMILY SSF56349 6 294 2.41E-55 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tph_c23770 a251a0c8b61f59cf99b70e106fae3f49 413 Gene3D G3DSA:3.90.1860.10 4 413 1.6E-114 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tph_c23770 a251a0c8b61f59cf99b70e106fae3f49 413 Pfam PF01139 tRNA-splicing ligase RtcB 31 413 5.6E-113 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tph_c23770 a251a0c8b61f59cf99b70e106fae3f49 413 SUPERFAMILY SSF103365 22 413 1.83E-116 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 Tph_c20430 748b386e5730e85b8e67b1848a08e6d9 211 Gene3D G3DSA:1.20.120.680 8 210 2.7E-68 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c20430 748b386e5730e85b8e67b1848a08e6d9 211 Pfam PF04961 Formiminotransferase-cyclodeaminase 8 187 5.0E-65 T 14-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c20430 748b386e5730e85b8e67b1848a08e6d9 211 SUPERFAMILY SSF101262 4 210 9.42E-57 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c23650 0d03f1d64c8246839ef996401f115598 390 Gene3D G3DSA:1.10.287.470 89 194 3.4E-56 T 14-10-2018 Tph_c23650 0d03f1d64c8246839ef996401f115598 390 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 116 385 1.9E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 Tph_c23650 0d03f1d64c8246839ef996401f115598 390 Gene3D G3DSA:2.40.50.100 55 229 3.4E-56 T 14-10-2018 Tph_c23650 0d03f1d64c8246839ef996401f115598 390 SUPERFAMILY SSF111369 42 277 3.53E-10 T 14-10-2018 Tph_c23650 0d03f1d64c8246839ef996401f115598 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 280 1.1E-21 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain Tph_c23650 0d03f1d64c8246839ef996401f115598 390 Gene3D G3DSA:2.40.30.170 44 311 3.4E-56 T 14-10-2018 Tph_c23650 0d03f1d64c8246839ef996401f115598 390 Gene3D G3DSA:2.40.420.20 41 370 3.4E-56 T 14-10-2018 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 SUPERFAMILY SSF51735 2 182 1.14E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c19850 0742337f518cbf742ed844fe3c961910 332 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 7.9E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 2.6E-68 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 328 44.363 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 SUPERFAMILY SSF48179 183 328 5.95E-72 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 PIRSF PIRSF000116 202 332 7.6E-15 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 PIRSF PIRSF000116 4 205 9.7E-42 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 328 2.5E-140 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 Gene3D G3DSA:1.10.3730.40 182 332 3.1E-73 T 14-10-2018 Tph_c19850 0742337f518cbf742ed844fe3c961910 332 Gene3D G3DSA:3.40.50.720 1 181 6.0E-80 T 14-10-2018 Tph_c21340 3a94934d490b1153832fc85399437457 145 SUPERFAMILY SSF56770 9 139 6.41E-54 T 14-10-2018 Tph_c21340 3a94934d490b1153832fc85399437457 145 Gene3D G3DSA:3.40.50.12280 2 144 4.3E-52 T 14-10-2018 Tph_c21340 3a94934d490b1153832fc85399437457 145 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 22 131 3.6E-28 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 SMART SM00930 2 74 4.2E-15 T 14-10-2018 IPR018449 NIL domain Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 Gene3D G3DSA:3.30.70.260 3 76 1.0E-9 T 14-10-2018 Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 SUPERFAMILY SSF54862 57 132 1.95E-16 T 14-10-2018 Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 Gene3D G3DSA:3.30.70.20 79 132 3.0E-11 T 14-10-2018 Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 SUPERFAMILY SSF55021 6 75 6.54E-15 T 14-10-2018 Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 Pfam PF13237 4Fe-4S dicluster domain 78 126 5.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c18150 df757ff0a73c396d5cba961252364ac0 135 Pfam PF09383 NIL domain 6 72 2.0E-12 T 14-10-2018 IPR018449 NIL domain Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 Gene3D G3DSA:3.40.50.2030 258 426 1.7E-67 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 Gene3D G3DSA:3.40.50.2030 119 257 2.5E-60 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 427 19.214 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 Pfam PF03063 Prismane/CO dehydrogenase family 81 423 5.8E-123 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 Gene3D G3DSA:1.20.1270.20 1 118 4.0E-40 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 Pfam PF03063 Prismane/CO dehydrogenase family 1 81 2.1E-18 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 SUPERFAMILY SSF56821 1 426 1.83E-168 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Tph_c09130 a2aee5632b351b17bd8195403af7832a 427 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 24 426 1.6E-194 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c17120 6604283c30df7531aeaa602cf00d8554 376 Gene3D G3DSA:3.40.1610.10 5 237 5.1E-50 T 14-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal Tph_c17120 6604283c30df7531aeaa602cf00d8554 376 Pfam PF06032 Protein of unknown function (DUF917) 9 371 7.9E-103 T 14-10-2018 IPR010318 Protein of unknown function DUF917 Tph_c17120 6604283c30df7531aeaa602cf00d8554 376 SUPERFAMILY SSF160991 6 372 2.62E-86 T 14-10-2018 Tph_c05180 6a654d1971321b81e8117d51d18add44 268 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 38 253 30.019 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 Tph_c05180 6a654d1971321b81e8117d51d18add44 268 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 39 245 4.3E-54 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Tph_c05180 6a654d1971321b81e8117d51d18add44 268 Gene3D G3DSA:1.10.1760.20 38 248 2.3E-55 T 14-10-2018 Tph_c05180 6a654d1971321b81e8117d51d18add44 268 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 38 243 1.5E-93 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 Gene3D G3DSA:3.50.7.10 191 371 2.0E-236 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 Hamap MF_00600 60 kDa chaperonin [groL]. 2 539 42.064 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 PRINTS PR00298 60kDa chaperonin signature 267 290 2.2E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 PRINTS PR00298 60kDa chaperonin signature 83 110 2.2E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 PRINTS PR00298 60kDa chaperonin signature 349 374 2.2E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 PRINTS PR00298 60kDa chaperonin signature 397 418 2.2E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 PRINTS PR00298 60kDa chaperonin signature 27 53 2.2E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 SUPERFAMILY SSF54849 137 204 7.55E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 521 8.2E-103 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 Gene3D G3DSA:3.30.260.10 136 409 2.0E-236 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 525 1.4E-260 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 Gene3D G3DSA:1.10.560.10 8 519 2.0E-236 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 SUPERFAMILY SSF48592 7 519 1.5E-80 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Tph_c04000 a4a96792007e27d62f059be5c7774aa5 541 SUPERFAMILY SSF52029 183 375 1.19E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 SMART SM00116 98 145 8.5E-5 T 14-10-2018 IPR000644 CBS domain Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 SMART SM00116 158 206 2.7E-8 T 14-10-2018 IPR000644 CBS domain Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 452 2.1E-202 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 PIRSF PIRSF000130 2 483 1.4E-217 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 SMART SM01240 9 471 0.0 T 14-10-2018 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 471 3.0E-170 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 SUPERFAMILY SSF54631 96 204 5.81E-29 T 14-10-2018 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 483 87.453 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 SUPERFAMILY SSF51412 6 475 3.14E-130 T 14-10-2018 Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 Pfam PF00571 CBS domain 151 202 1.4E-8 T 14-10-2018 IPR000644 CBS domain Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 Pfam PF00571 CBS domain 97 141 3.7E-8 T 14-10-2018 IPR000644 CBS domain Tph_c11720 b0877c1917b6dbaf7e46fe0d23be79bb 483 Gene3D G3DSA:3.20.20.70 1 483 6.4E-230 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 Gene3D G3DSA:3.40.350.10 6 131 2.2E-32 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 SUPERFAMILY SSF55920 130 357 5.36E-76 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 131 6.8E-23 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 287 299 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 Gene3D G3DSA:3.90.230.10 132 357 2.8E-82 T 14-10-2018 Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 PRINTS PR00599 Methionine aminopeptidase-1 signature 211 227 4.8E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 PRINTS PR00599 Methionine aminopeptidase-1 signature 309 321 4.8E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 Pfam PF00557 Metallopeptidase family M24 139 340 3.6E-65 T 14-10-2018 IPR000994 Peptidase M24 Tph_c16490 c3eba4167e526638ebe345bdf9ea5954 357 SUPERFAMILY SSF53092 8 130 1.19E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Tph_c15330 754292e57b54933004788f302388f0dd 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 212 1.4E-69 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 PIRSF PIRSF001438 1 308 3.8E-109 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 SUPERFAMILY SSF54782 222 306 1.15E-23 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 229 297 5.5E-17 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 Gene3D G3DSA:3.40.190.10 101 200 2.0E-77 T 14-10-2018 Tph_c15330 754292e57b54933004788f302388f0dd 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 299 4.9E-98 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 4 299 36.446 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 Gene3D G3DSA:3.40.190.10 5 215 2.0E-77 T 14-10-2018 Tph_c15330 754292e57b54933004788f302388f0dd 308 Gene3D G3DSA:3.30.160.40 224 307 2.5E-24 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 6.5E-37 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 6.5E-37 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 PRINTS PR00151 Porphobilinogen deaminase signature 232 249 6.5E-37 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 6.5E-37 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 6.5E-37 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15330 754292e57b54933004788f302388f0dd 308 SUPERFAMILY SSF53850 3 216 7.53E-74 T 14-10-2018 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 SUPERFAMILY SSF57783 569 607 1.28E-12 T 14-10-2018 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Gene3D G3DSA:1.10.460.10 135 545 3.6E-169 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Gene3D G3DSA:3.40.50.140 1 134 1.9E-48 T 14-10-2018 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 1.2E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.2E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 1.2E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.2E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 468 482 1.2E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Pfam PF01751 Toprim domain 4 113 7.4E-26 T 14-10-2018 IPR006171 TOPRIM domain Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Gene3D G3DSA:1.10.290.10 250 385 3.6E-169 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 SUPERFAMILY SSF57783 611 644 1.96E-5 T 14-10-2018 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Pfam PF01131 DNA topoisomerase 128 543 7.4E-136 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 SMART SM00437 242 505 2.6E-122 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 SMART SM00493 3 103 5.4E-27 T 14-10-2018 IPR006171 TOPRIM domain Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Gene3D G3DSA:3.30.65.10 559 611 1.4E-10 T 14-10-2018 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 605 2.2E-243 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 SMART SM00436 104 192 1.4E-48 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Gene3D G3DSA:2.70.20.10 184 452 3.6E-169 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 636 54.777 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 SUPERFAMILY SSF56712 3 583 2.49E-197 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 612 649 6.9E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Tph_c10720 a19fa72a1b67e0e72aa2885f236f737e 692 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 572 605 8.9E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 Tph_c10470 ddaced7460852a7e02b4bacb87f9c375 160 Pfam PF01937 Protein of unknown function DUF89 5 149 1.3E-13 T 14-10-2018 IPR002791 Domain of unknown function DUF89 Tph_c10470 ddaced7460852a7e02b4bacb87f9c375 160 Gene3D G3DSA:1.10.285.20 67 138 4.8E-12 T 14-10-2018 Tph_c10470 ddaced7460852a7e02b4bacb87f9c375 160 SUPERFAMILY SSF111321 1 150 2.75E-22 T 14-10-2018 IPR036075 AF1104-like superfamily Tph_c04690 3d3540f826555d1484a1a6cda0ae870f 277 Pfam PF00795 Carbon-nitrogen hydrolase 5 255 3.5E-60 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tph_c04690 3d3540f826555d1484a1a6cda0ae870f 277 Gene3D G3DSA:3.60.110.10 1 275 8.1E-105 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c04690 3d3540f826555d1484a1a6cda0ae870f 277 SUPERFAMILY SSF56317 1 263 1.27E-80 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c04690 3d3540f826555d1484a1a6cda0ae870f 277 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 SUPERFAMILY SSF55973 242 391 1.26E-68 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Gene3D G3DSA:3.30.300.10 102 383 1.0E-174 T 14-10-2018 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Gene3D G3DSA:3.30.300.10 5 242 1.0E-174 T 14-10-2018 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 9.6E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 392 57.558 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 SUPERFAMILY SSF55973 3 109 2.83E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 125 135 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 240 2.2E-48 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 PIRSF PIRSF000497 1 393 8.9E-174 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Gene3D G3DSA:3.30.300.10 11 279 1.0E-174 T 14-10-2018 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 242 381 5.4E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 SUPERFAMILY SSF55973 121 241 4.71E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 390 8.8E-182 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c14310 6ea9949c779e1b822f48d96bd860f4f1 401 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 268 276 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Tph_c24910 98f485808e5e6298cbb9df6a3cdfb172 412 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 4.2E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c24910 98f485808e5e6298cbb9df6a3cdfb172 412 Pfam PF01548 Transposase 5 165 2.5E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c26320 98f485808e5e6298cbb9df6a3cdfb172 412 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 4.2E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c26320 98f485808e5e6298cbb9df6a3cdfb172 412 Pfam PF01548 Transposase 5 165 2.5E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c05500 458d2f0335bad872839b56c1f3e193c3 457 SUPERFAMILY SSF52540 90 420 5.96E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05500 458d2f0335bad872839b56c1f3e193c3 457 Gene3D G3DSA:3.30.450.380 33 201 2.6E-45 T 14-10-2018 Tph_c05500 458d2f0335bad872839b56c1f3e193c3 457 Gene3D G3DSA:3.40.50.300 202 439 1.2E-77 T 14-10-2018 Tph_c05500 458d2f0335bad872839b56c1f3e193c3 457 Pfam PF00437 Type II/IV secretion system protein 107 382 8.5E-83 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 11 25 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 Pfam PF02602 Uroporphyrinogen-III synthase HemD 267 494 6.5E-61 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 6 239 4.8E-86 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 SUPERFAMILY SSF69618 252 498 2.88E-66 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 Gene3D G3DSA:3.40.1010.10 5 121 5.9E-42 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 Gene3D G3DSA:3.30.950.10 122 245 3.4E-39 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 215 1.2E-42 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 Gene3D G3DSA:3.40.50.10090 377 499 5.2E-25 T 14-10-2018 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 SUPERFAMILY SSF53790 5 255 5.76E-75 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 Gene3D G3DSA:3.40.50.10090 246 376 9.7E-29 T 14-10-2018 Tph_c15320 90535b30c46698049a7afd3ed1063b0e 506 PIRSF PIRSF036426 1 254 9.7E-96 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 SMART SM01374 1 122 5.8E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.5E-56 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 SUPERFAMILY SSF50193 2 121 1.96E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 1.0E-53 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25750 b5c7ce1b4f2cba86bc96a595a7a88e86 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.154 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 9.8E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 9.8E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 9.8E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 9.8E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 9.8E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 SUPERFAMILY SSF53098 2 157 2.54E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 40.199 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 153 8.3E-40 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 2.8E-46 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Tph_c12290 53442c2f3dbce7261384fa3988f23675 164 Gene3D G3DSA:3.30.420.10 1 158 2.3E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c16530 9076f5df34928b257c9b4eeea93f681f 163 SUPERFAMILY SSF54523 11 108 5.1E-6 T 14-10-2018 Tph_c16530 9076f5df34928b257c9b4eeea93f681f 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 28 4.5E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c16530 9076f5df34928b257c9b4eeea93f681f 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 28 7.7E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 ProSitePatterns PS00433 Phosphofructokinase signature. 247 265 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 SUPERFAMILY SSF53784 4 319 1.15E-117 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 Pfam PF00365 Phosphofructokinase 7 279 3.5E-110 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 Gene3D G3DSA:3.40.50.460 146 255 2.4E-114 T 14-10-2018 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PIRSF PIRSF000532 4 322 1.8E-121 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 243 265 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 142 160 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 162 178 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 197 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 216 228 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 124 141 5.7E-86 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 Gene3D G3DSA:3.40.50.450 7 290 2.4E-114 T 14-10-2018 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 322 45.583 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Tph_c09380 2795d1e5f5674969e0c95c28af73dce6 323 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 303 9.9E-128 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.5E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.9E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 SMART SM00421 146 203 1.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 SUPERFAMILY SSF52172 2 119 4.97E-8 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 Gene3D G3DSA:3.40.50.12740 5 209 6.5E-28 T 14-10-2018 Tph_c21500 2f7fca59b94bf26f26bacd021981d633 213 SUPERFAMILY SSF46894 140 210 3.4E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 Pfam PF01180 Dihydroorotate dehydrogenase 4 283 4.7E-72 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 SUPERFAMILY SSF51395 1 301 2.6E-87 T 14-10-2018 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 238 258 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 301 1.5E-111 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 Gene3D G3DSA:3.20.20.70 2 302 2.9E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 300 40.502 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Tph_c14430 92b696ea2d2e66c20a194048f283f7ae 308 PIRSF PIRSF000164 1 302 1.6E-81 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Tph_c24880 67e65c8f3f1e6f593d7c23d943320c37 229 Gene3D G3DSA:3.40.109.40 2 198 4.5E-38 T 14-10-2018 Tph_c24880 67e65c8f3f1e6f593d7c23d943320c37 229 SUPERFAMILY SSF56507 21 193 5.62E-31 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 Pfam PF01168 Alanine racemase, N-terminal domain 9 230 3.2E-74 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 Gene3D G3DSA:3.20.20.10 11 226 4.3E-147 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 Hamap MF_01201 Alanine racemase. 2 372 36.766 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 SMART SM01005 244 372 2.8E-77 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 TIGRFAM TIGR00492 alr: alanine racemase 3 372 2.6E-126 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 SUPERFAMILY SSF50621 239 375 4.88E-54 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 354 367 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 64 82 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 125 137 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 277 292 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 203 230 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 28 44 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 298 315 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 260 275 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 PRINTS PR00992 Alanine racemase signature 160 171 6.8E-70 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 33 43 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 SUPERFAMILY SSF51419 9 245 1.96E-70 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 Gene3D G3DSA:2.40.37.10 6 371 4.3E-147 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Tph_c18560 a20fe44a8a11ce4b06b9b4e109bd6c04 381 Pfam PF00842 Alanine racemase, C-terminal domain 244 371 1.2E-49 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 SUPERFAMILY SSF55252 80 148 1.96E-20 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 TIGRFAM TIGR01529 argR_whole: arginine repressor 4 149 9.6E-45 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 Pfam PF02863 Arginine repressor, C-terminal domain 80 146 2.0E-27 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 PRINTS PR01467 Bacterial arginine repressor signature 36 51 9.5E-25 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 PRINTS PR01467 Bacterial arginine repressor signature 20 33 9.5E-25 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 PRINTS PR01467 Bacterial arginine repressor signature 118 133 9.5E-25 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 PRINTS PR01467 Bacterial arginine repressor signature 88 101 9.5E-25 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 127 1.0E-12 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 Pfam PF01316 Arginine repressor, DNA binding domain 2 64 6.2E-21 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 Gene3D G3DSA:1.10.10.10 4 66 6.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 Gene3D G3DSA:3.30.1360.40 70 149 9.6E-29 T 14-10-2018 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 Hamap MF_00173 Arginine repressor [argR]. 1 150 60.799 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Tph_c16230 4526dc313be10ef43942b82f5a9b9ddf 150 SUPERFAMILY SSF46785 2 72 6.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c08080 153ef3b1838f69ce9960867d54e72ca1 305 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 17 262 5.9E-81 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain Tph_c08080 153ef3b1838f69ce9960867d54e72ca1 305 Gene3D G3DSA:3.90.920.30 24 303 7.7E-96 T 14-10-2018 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 1.5E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 47 59 1.5E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 313 329 1.5E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 4 17 1.5E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 392 411 1.5E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 686 4.4E-214 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 3 551 1.8E-207 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 686 25.527 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05770 6202d16f47b0074eed3481841b24e106 690 SUPERFAMILY SSF109604 337 488 1.05E-15 T 14-10-2018 Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 358 2.5E-142 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 Pfam PF00437 Type II/IV secretion system protein 91 285 3.9E-43 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 SMART SM00382 138 263 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 209 223 - T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 SUPERFAMILY SSF52540 4 352 2.49E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 Gene3D G3DSA:3.30.450.90 1 116 2.1E-26 T 14-10-2018 Tph_c16640 05935714c0be28ffc0152fd5e94c31d4 367 Gene3D G3DSA:3.40.50.300 117 365 3.4E-98 T 14-10-2018 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 SMART SM01018 1 84 2.0E-33 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 Gene3D G3DSA:1.10.1240.10 2 77 8.9E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 Pfam PF02310 B12 binding domain 90 200 1.5E-27 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 SUPERFAMILY SSF47644 4 78 4.32E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 Pfam PF02607 B12 binding domain 5 76 4.6E-22 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 SUPERFAMILY SSF52242 69 210 1.15E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 TIGRFAM TIGR02370 pyl_corrinoid: methyltransferase cognate corrinoid proteins, Methanosarcina family 7 201 3.6E-67 T 14-10-2018 IPR012741 Methyltransferase cognate corrinoid protein GO:0015948|GO:0031419|GO:0050897 Tph_c03600 af04e755adcec8d9a51859f3dfb8c023 219 Gene3D G3DSA:3.40.50.280 78 215 7.4E-51 T 14-10-2018 Tph_c00850 0e1608d1a3bf21e3ee5d1255410a64d5 245 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 9.6E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c00850 0e1608d1a3bf21e3ee5d1255410a64d5 245 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 2.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c00850 0e1608d1a3bf21e3ee5d1255410a64d5 245 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 2.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c00850 0e1608d1a3bf21e3ee5d1255410a64d5 245 Gene3D G3DSA:1.10.357.10 9 236 1.6E-26 T 14-10-2018 Tph_c00850 0e1608d1a3bf21e3ee5d1255410a64d5 245 SUPERFAMILY SSF46689 11 76 2.24E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 Gene3D G3DSA:3.10.20.10 35 103 3.1E-11 T 14-10-2018 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 29 267 5.0E-59 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 SUPERFAMILY SSF53927 13 267 2.05E-70 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 PIRSF PIRSF015626 5 269 1.0E-72 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 Pfam PF02634 FdhD/NarQ family 33 267 2.1E-73 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 Gene3D G3DSA:3.40.140.10 125 269 4.4E-49 T 14-10-2018 Tph_c22360 5c7e92dcfec530073babd7345000c299 269 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 9 268 30.257 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 Pfam PF00709 Adenylosuccinate synthetase 4 420 4.0E-176 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 2.2E-165 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 SMART SM00788 3 421 5.5E-257 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 Gene3D G3DSA:3.40.440.10 5 256 3.5E-100 T 14-10-2018 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 Gene3D G3DSA:1.10.300.10 106 204 3.5E-100 T 14-10-2018 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 Gene3D G3DSA:3.90.170.10 264 428 3.6E-69 T 14-10-2018 Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 SUPERFAMILY SSF52540 2 422 3.61E-167 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00890 d4dfc6bbd08e2ebe9be40b06d5fbf68f 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 193.747 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 SMART SM00518 2 277 1.6E-106 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 Pfam PF01261 Xylose isomerase-like TIM barrel 20 237 4.2E-40 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 173 180 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 Hamap MF_00152 Probable endonuclease 4 [nfo]. 1 277 42.318 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 Gene3D G3DSA:3.20.20.150 2 278 3.3E-103 T 14-10-2018 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 274 5.6E-92 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Tph_c22340 c2b311518aaaf93724b12489c78f586f 282 SUPERFAMILY SSF51658 1 279 1.44E-91 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 168 5.3E-78 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 Pfam PF06426 Serine acetyltransferase, N-terminal 3 37 2.8E-6 T 14-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 Gene3D G3DSA:2.160.10.10 69 186 1.1E-38 T 14-10-2018 Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 SUPERFAMILY SSF51161 3 172 2.63E-60 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 Gene3D G3DSA:1.10.3130.10 1 68 6.1E-28 T 14-10-2018 Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 110 2.8E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Tph_c04920 85d63b16835b7a84b8e59b6275519eb9 231 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 153 6.6E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Tph_c21270 14502eac9cae1d3ad73fce6bea5856ff 296 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 166 281 6.0E-19 T 14-10-2018 IPR005642 Lysine exporter LysO Tph_c21270 14502eac9cae1d3ad73fce6bea5856ff 296 Pfam PF03956 Lysine exporter LysO 111 295 3.4E-44 T 14-10-2018 IPR005642 Lysine exporter LysO Tph_c11730 e4e09d715f07a6cf08bfef9fa80186fb 289 Pfam PF07728 AAA domain (dynein-related subfamily) 37 165 1.5E-10 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tph_c11730 e4e09d715f07a6cf08bfef9fa80186fb 289 Gene3D G3DSA:3.40.50.300 19 206 1.2E-26 T 14-10-2018 Tph_c11730 e4e09d715f07a6cf08bfef9fa80186fb 289 SMART SM00382 33 197 9.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c11730 e4e09d715f07a6cf08bfef9fa80186fb 289 SUPERFAMILY SSF52540 26 265 5.02E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27300 7bc452f7dabf0054af8dd3c3693f2d55 342 SMART SM00852 174 306 2.0E-17 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c27300 7bc452f7dabf0054af8dd3c3693f2d55 342 SUPERFAMILY SSF53218 170 337 2.62E-31 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c27300 7bc452f7dabf0054af8dd3c3693f2d55 342 Gene3D G3DSA:3.40.980.10 161 308 8.3E-26 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c27300 7bc452f7dabf0054af8dd3c3693f2d55 342 Pfam PF00994 Probable molybdopterin binding domain 174 304 2.1E-18 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 Pfam PF13534 4Fe-4S dicluster domain 258 322 7.7E-10 T 14-10-2018 Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 SUPERFAMILY SSF51430 1 279 1.15E-62 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 Gene3D G3DSA:1.10.1060.10 247 334 1.5E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 Gene3D G3DSA:3.20.20.100 1 237 8.7E-64 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 Pfam PF00248 Aldo/keto reductase family 17 200 3.6E-35 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 PRINTS PR00069 Aldo-keto reductase signature 90 108 2.4E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 PRINTS PR00069 Aldo-keto reductase signature 38 62 2.4E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 PRINTS PR00069 Aldo-keto reductase signature 127 144 2.4E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 SUPERFAMILY SSF46548 253 332 1.15E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c18620 51bea8dee88f7bc757ab8dbe48769c4c 335 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 307 318 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 608 41.647 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Gene3D G3DSA:3.40.50.10490 247 607 1.3E-152 T 14-10-2018 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 SUPERFAMILY SSF53697 244 608 9.28E-116 T 14-10-2018 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Pfam PF01380 SIS domain 462 590 4.2E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Pfam PF01380 SIS domain 289 414 2.9E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Pfam PF13522 Glutamine amidotransferase domain 63 191 5.1E-24 T 14-10-2018 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 SUPERFAMILY SSF56235 2 234 1.46E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Gene3D G3DSA:3.40.50.10490 446 593 1.3E-152 T 14-10-2018 Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 Gene3D G3DSA:3.60.20.10 2 239 8.4E-79 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c19720 778ec8ce40a6473e21db0dc29d7544a2 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 608 2.1E-254 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Tph_c10640 1d6f4f0c54d5b8d3c40072fa46cc5316 75 ProSitePatterns PS00234 Gas vesicles protein GVPa signature 1. 12 26 - T 14-10-2018 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 Tph_c10640 1d6f4f0c54d5b8d3c40072fa46cc5316 75 Pfam PF00741 Gas vesicle protein 11 49 4.3E-15 T 14-10-2018 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 Tph_c10640 1d6f4f0c54d5b8d3c40072fa46cc5316 75 Hamap MF_00576 Gas vesicle structural protein [gvpA]. 4 75 20.831 T 14-10-2018 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 Tph_c10640 1d6f4f0c54d5b8d3c40072fa46cc5316 75 ProSitePatterns PS00669 Gas vesicles protein GVPa signature 2. 45 58 - T 14-10-2018 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 Tph_c21600 ad14b1cbf63a86d8f9dc45b308baf2f4 120 SUPERFAMILY SSF141091 1 101 4.97E-36 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21600 ad14b1cbf63a86d8f9dc45b308baf2f4 120 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.3E-38 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21600 ad14b1cbf63a86d8f9dc45b308baf2f4 120 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 101 8.5E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21600 ad14b1cbf63a86d8f9dc45b308baf2f4 120 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21600 ad14b1cbf63a86d8f9dc45b308baf2f4 120 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.173 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c04520 a916f51fea34204fbbbe408a760cefb7 438 SUPERFAMILY SSF51649 137 429 7.72E-92 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tph_c04520 a916f51fea34204fbbbe408a760cefb7 438 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 145 423 5.2E-57 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tph_c04520 a916f51fea34204fbbbe408a760cefb7 438 SUPERFAMILY SSF54966 10 137 1.96E-35 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tph_c04520 a916f51fea34204fbbbe408a760cefb7 438 Gene3D G3DSA:3.20.20.110 138 428 3.0E-106 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tph_c04520 a916f51fea34204fbbbe408a760cefb7 438 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 13 133 5.5E-12 T 14-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tph_c04520 a916f51fea34204fbbbe408a760cefb7 438 Gene3D G3DSA:3.30.70.150 8 137 2.9E-42 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Tph_c02190 9dbfdd5f3897923851b4f2e9d89d9b8c 121 SUPERFAMILY SSF46785 59 120 1.58E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c02190 9dbfdd5f3897923851b4f2e9d89d9b8c 121 Gene3D G3DSA:1.10.10.10 62 121 2.2E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.1E-36 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.1E-36 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00097 Anthranilate synthase component II signature 164 177 2.1E-36 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.1E-36 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.1E-36 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.1E-36 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.9E-13 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 2.9E-13 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.9E-13 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 2 186 2.1E-79 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 Pfam PF00117 Glutamine amidotransferase class-I 4 185 8.3E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 Gene3D G3DSA:3.40.50.880 2 196 2.8E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 5.8E-7 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 5.8E-7 T 14-10-2018 Tph_c20560 24f7173a57fcf6c6bff6a2053b046861 219 SUPERFAMILY SSF52317 2 190 7.05E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c12800 d666ce38c34687e5e92b6f2d9c88a8aa 253 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 16 249 2.8E-73 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Tph_c12800 d666ce38c34687e5e92b6f2d9c88a8aa 253 Gene3D G3DSA:3.60.140.10 1 253 2.0E-83 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Tph_c12800 d666ce38c34687e5e92b6f2d9c88a8aa 253 SUPERFAMILY SSF64438 8 251 4.58E-75 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Tph_c12800 d666ce38c34687e5e92b6f2d9c88a8aa 253 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 22 252 1.0E-49 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 SUPERFAMILY SSF55785 21 83 2.79E-5 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 Gene3D G3DSA:3.30.450.20 98 216 4.6E-19 T 14-10-2018 Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 SMART SM00086 177 218 1.6E-4 T 14-10-2018 IPR001610 PAC motif Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 SMART SM00086 47 88 8.1 T 14-10-2018 IPR001610 PAC motif Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 Pfam PF08447 PAS fold 128 206 1.9E-14 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 133 225 5.2E-12 T 14-10-2018 IPR000014 PAS domain Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 Pfam PF13426 PAS domain 30 82 0.73 T 14-10-2018 IPR000014 PAS domain Tph_c07100 fb77555dbb84e80fe73d917f223b9a93 315 SUPERFAMILY SSF55785 119 226 2.24E-19 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 Gene3D G3DSA:3.40.50.150 53 273 3.3E-78 T 14-10-2018 Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 Pfam PF01564 Spermine/spermidine synthase domain 58 238 8.2E-63 T 14-10-2018 Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 Pfam PF17284 Spermidine synthase tetramerisation domain 5 54 2.1E-9 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 TIGRFAM TIGR00417 speE: spermidine synthase 6 268 3.7E-98 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 Gene3D G3DSA:2.30.140.10 4 52 1.4E-12 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 SUPERFAMILY SSF53335 4 273 9.7E-85 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c15030 acf2cfa59e101c37cd3e8b331f3ad61e 274 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 274 40.659 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 SMART SM00387 171 281 5.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 Gene3D G3DSA:1.10.287.130 69 130 1.2E-6 T 14-10-2018 Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 229 239 2.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 241 259 2.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 PRINTS PR00344 Bacterial sensor protein C-terminal signature 265 278 2.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 SUPERFAMILY SSF55874 141 278 3.83E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 79 126 2.4E-14 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 Gene3D G3DSA:3.30.565.10 131 278 4.3E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c22460 3835671c6cf4b8225cd6e221753e79fe 282 Pfam PF14501 GHKL domain 172 266 1.8E-14 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Tph_c18780 91bcab447119d02d8ff52eea2dbbc055 321 Gene3D G3DSA:3.30.420.40 6 257 4.8E-90 T 14-10-2018 Tph_c18780 91bcab447119d02d8ff52eea2dbbc055 321 SUPERFAMILY SSF53067 5 257 2.72E-42 T 14-10-2018 Tph_c18780 91bcab447119d02d8ff52eea2dbbc055 321 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 257 5.4E-49 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Tph_c18780 91bcab447119d02d8ff52eea2dbbc055 321 Gene3D G3DSA:3.30.420.40 100 240 4.8E-90 T 14-10-2018 Tph_c18780 91bcab447119d02d8ff52eea2dbbc055 321 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 6 256 1.0E-54 T 14-10-2018 IPR008275 CoA enzyme activase Tph_c01940 10b27633f26eba2a0d00fbbc4b8261cd 141 Pfam PF01850 PIN domain 4 128 7.6E-16 T 14-10-2018 IPR002716 PIN domain Tph_c01940 10b27633f26eba2a0d00fbbc4b8261cd 141 Gene3D G3DSA:3.40.50.1010 3 134 8.9E-38 T 14-10-2018 Tph_c01940 10b27633f26eba2a0d00fbbc4b8261cd 141 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 133 10.149 T 14-10-2018 IPR022907 VapC family GO:0004540 Tph_c01940 10b27633f26eba2a0d00fbbc4b8261cd 141 SUPERFAMILY SSF88723 1 128 2.24E-25 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c20170 1bbd62f18c15834724221598554f100f 304 SUPERFAMILY SSF53850 36 303 4.24E-67 T 14-10-2018 Tph_c20170 1bbd62f18c15834724221598554f100f 304 Gene3D G3DSA:3.40.190.10 39 299 1.9E-95 T 14-10-2018 Tph_c20170 1bbd62f18c15834724221598554f100f 304 Gene3D G3DSA:3.40.190.120 141 242 1.9E-95 T 14-10-2018 Tph_c20170 1bbd62f18c15834724221598554f100f 304 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 36 299 2.4E-65 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Tph_c21320 988cab0b6a65d503071ebd061bcbad7a 360 Gene3D G3DSA:1.10.645.20 6 360 2.4E-117 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21320 988cab0b6a65d503071ebd061bcbad7a 360 Pfam PF00374 Nickel-dependent hydrogenase 43 112 1.0E-10 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tph_c21320 988cab0b6a65d503071ebd061bcbad7a 360 SUPERFAMILY SSF56762 16 360 2.75E-102 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21320 988cab0b6a65d503071ebd061bcbad7a 360 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 282 4.7E-43 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21320 988cab0b6a65d503071ebd061bcbad7a 360 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 287 360 3.1E-13 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21320 988cab0b6a65d503071ebd061bcbad7a 360 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 43 68 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tph_c20200 93e36479ff1da2341f1194ba849576ba 416 Pfam PF13439 Glycosyltransferase Family 4 26 202 2.8E-31 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c20200 93e36479ff1da2341f1194ba849576ba 416 Gene3D G3DSA:3.40.50.2000 199 391 2.5E-115 T 14-10-2018 Tph_c20200 93e36479ff1da2341f1194ba849576ba 416 SUPERFAMILY SSF53756 24 412 1.04E-90 T 14-10-2018 Tph_c20200 93e36479ff1da2341f1194ba849576ba 416 Pfam PF00534 Glycosyl transferases group 1 210 388 9.8E-45 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c20200 93e36479ff1da2341f1194ba849576ba 416 Gene3D G3DSA:3.40.50.2000 11 407 2.5E-115 T 14-10-2018 Tph_c21300 e4e39b3879dbe6b806ee7ef3c42d5ef3 129 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 20 63 7.1E-18 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Tph_c21300 e4e39b3879dbe6b806ee7ef3c42d5ef3 129 Pfam PF02416 mttA/Hcf106 family 20 75 8.2E-19 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Tph_c21300 e4e39b3879dbe6b806ee7ef3c42d5ef3 129 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 17 100 17.757 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Tph_c21300 e4e39b3879dbe6b806ee7ef3c42d5ef3 129 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 37 56 1.6E-8 T 14-10-2018 Tph_c21300 e4e39b3879dbe6b806ee7ef3c42d5ef3 129 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 17 37 1.6E-8 T 14-10-2018 Tph_c04860 f514ecde99694f72f119d827e81015b8 252 SMART SM00382 30 240 3.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c04860 f514ecde99694f72f119d827e81015b8 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c04860 f514ecde99694f72f119d827e81015b8 252 Pfam PF00005 ABC transporter 21 176 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c04860 f514ecde99694f72f119d827e81015b8 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 252 6.6E-125 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 Tph_c04860 f514ecde99694f72f119d827e81015b8 252 SUPERFAMILY SSF52540 4 238 7.25E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04860 f514ecde99694f72f119d827e81015b8 252 Gene3D G3DSA:3.40.50.300 2 248 1.3E-65 T 14-10-2018 Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 Gene3D G3DSA:3.40.50.1100 59 155 5.7E-130 T 14-10-2018 Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 Gene3D G3DSA:3.40.50.1100 10 323 5.7E-130 T 14-10-2018 Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 TIGRFAM TIGR00260 thrC: threonine synthase 7 324 9.5E-102 T 14-10-2018 IPR004450 Threonine synthase-like Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 PIRSF PIRSF038945 1 350 8.4E-168 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 317 1.8E-76 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tph_c15550 e1be15df53ad05e9f3c3451e35b82f86 354 SUPERFAMILY SSF53686 5 350 7.07E-109 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c18140 c4c5dda1020a6d5e8f9fc5a28eb369fe 246 PIRSF PIRSF006421 16 246 5.4E-58 T 14-10-2018 IPR007183 Uncharacterised protein family UPF0280 Tph_c18140 c4c5dda1020a6d5e8f9fc5a28eb369fe 246 SUPERFAMILY SSF143631 3 244 6.02E-68 T 14-10-2018 IPR003374 ApbE-like superfamily Tph_c18140 c4c5dda1020a6d5e8f9fc5a28eb369fe 246 Gene3D G3DSA:3.10.520.10 12 245 1.2E-79 T 14-10-2018 Tph_c05890 ff422589f5bfc50840e7a57c0ac29ac9 265 Pfam PF00809 Pterin binding enzyme 6 228 8.8E-28 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c05890 ff422589f5bfc50840e7a57c0ac29ac9 265 SUPERFAMILY SSF51717 1 260 5.1E-81 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c05890 ff422589f5bfc50840e7a57c0ac29ac9 265 Gene3D G3DSA:3.20.20.20 1 265 2.1E-95 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c25320 8e4c0787efc43a8a1a07e7fa6d505e76 566 Pfam PF01609 Transposase DDE domain 128 473 3.5E-8 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c25320 8e4c0787efc43a8a1a07e7fa6d505e76 566 Pfam PF14104 Domain of unknown function (DUF4277) 12 115 8.5E-26 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c25320 8e4c0787efc43a8a1a07e7fa6d505e76 566 SUPERFAMILY SSF53098 98 482 1.21E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c11770 8e4c0787efc43a8a1a07e7fa6d505e76 566 Pfam PF01609 Transposase DDE domain 128 473 3.5E-8 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c11770 8e4c0787efc43a8a1a07e7fa6d505e76 566 Pfam PF14104 Domain of unknown function (DUF4277) 12 115 8.5E-26 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c11770 8e4c0787efc43a8a1a07e7fa6d505e76 566 SUPERFAMILY SSF53098 98 482 1.21E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c23780 aeea28033586cc0f7e609acd25c36f5c 194 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 190 1.8E-31 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 Tph_c23780 aeea28033586cc0f7e609acd25c36f5c 194 Gene3D G3DSA:3.40.920.10 3 194 9.7E-46 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c23780 aeea28033586cc0f7e609acd25c36f5c 194 SUPERFAMILY SSF53323 5 194 1.7E-42 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 Tph_c05350 11a589da7e31e1c9a85b0402d25c1942 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 217 9.3E-24 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tph_c14680 f05f30dbf9eea03a9d5795b8ba149d96 41 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 8 41 2.7E-14 T 14-10-2018 IPR009229 Staphylococcal AgrD Tph_c12670 f28051be57c99f35cb7af131966bb617 420 Gene3D G3DSA:3.65.10.10 8 415 9.6E-165 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tph_c12670 f28051be57c99f35cb7af131966bb617 420 Gene3D G3DSA:3.65.10.10 23 232 9.6E-165 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tph_c12670 f28051be57c99f35cb7af131966bb617 420 SUPERFAMILY SSF55205 3 418 1.44E-134 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tph_c12670 f28051be57c99f35cb7af131966bb617 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 416 2.3E-169 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c12670 f28051be57c99f35cb7af131966bb617 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 407 4.9E-97 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tph_c12670 f28051be57c99f35cb7af131966bb617 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 3 418 43.437 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 Pfam PF02607 B12 binding domain 9 80 7.0E-8 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 SUPERFAMILY SSF52242 73 215 8.5E-37 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 SMART SM01018 5 87 1.1E-13 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 Gene3D G3DSA:1.10.1240.10 5 77 6.1E-21 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 SUPERFAMILY SSF47644 8 85 5.23E-14 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 Pfam PF02310 B12 binding domain 93 203 1.2E-16 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c01800 47ebbd6d5eb74dd415c068b5c6566bde 225 Gene3D G3DSA:3.40.50.280 78 218 5.1E-36 T 14-10-2018 Tph_c23350 527f281df3e86d374dc5e3f14396a991 254 Gene3D G3DSA:3.40.50.300 64 251 6.0E-40 T 14-10-2018 Tph_c23350 527f281df3e86d374dc5e3f14396a991 254 SMART SM00382 101 236 2.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c23350 527f281df3e86d374dc5e3f14396a991 254 Pfam PF01695 IstB-like ATP binding protein 58 230 5.9E-51 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c23350 527f281df3e86d374dc5e3f14396a991 254 SUPERFAMILY SSF52540 80 215 5.45E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23350 527f281df3e86d374dc5e3f14396a991 254 PIRSF PIRSF003073 3 254 4.7E-72 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Tph_c01890 88ecfef75db5802f7d6e0d392575d545 324 Pfam PF00348 Polyprenyl synthetase 35 271 1.3E-60 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tph_c01890 88ecfef75db5802f7d6e0d392575d545 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 205 217 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tph_c01890 88ecfef75db5802f7d6e0d392575d545 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 97 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tph_c01890 88ecfef75db5802f7d6e0d392575d545 324 SUPERFAMILY SSF48576 12 323 2.45E-81 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c01890 88ecfef75db5802f7d6e0d392575d545 324 Gene3D G3DSA:1.10.600.10 6 324 1.9E-90 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c25610 f355e234719cb2021ace1b80632d0192 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 14-10-2018 Tph_c25610 f355e234719cb2021ace1b80632d0192 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.727 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25610 f355e234719cb2021ace1b80632d0192 37 SUPERFAMILY SSF57840 1 37 6.93E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25610 f355e234719cb2021ace1b80632d0192 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25610 f355e234719cb2021ace1b80632d0192 37 Pfam PF00444 Ribosomal protein L36 1 37 1.1E-19 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25610 f355e234719cb2021ace1b80632d0192 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 9.5E-24 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c06530 2f3a07b1c13cf0b6eac8b061a4c0ff87 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c06530 2f3a07b1c13cf0b6eac8b061a4c0ff87 228 Gene3D G3DSA:3.40.50.300 1 227 7.8E-70 T 14-10-2018 Tph_c06530 2f3a07b1c13cf0b6eac8b061a4c0ff87 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.0E-91 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Tph_c06530 2f3a07b1c13cf0b6eac8b061a4c0ff87 228 Pfam PF00005 ABC transporter 18 165 2.8E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c06530 2f3a07b1c13cf0b6eac8b061a4c0ff87 228 SMART SM00382 27 214 3.3E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c06530 2f3a07b1c13cf0b6eac8b061a4c0ff87 228 SUPERFAMILY SSF52540 1 220 8.4E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c02730 a1fbe9698499cdc93bd0f75ffd1a2e55 371 Pfam PF13439 Glycosyltransferase Family 4 15 176 2.8E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c02730 a1fbe9698499cdc93bd0f75ffd1a2e55 371 SUPERFAMILY SSF53756 6 363 4.19E-77 T 14-10-2018 Tph_c02730 a1fbe9698499cdc93bd0f75ffd1a2e55 371 Pfam PF00534 Glycosyl transferases group 1 193 347 7.9E-39 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c02730 a1fbe9698499cdc93bd0f75ffd1a2e55 371 Gene3D G3DSA:3.40.50.2000 173 350 1.4E-72 T 14-10-2018 Tph_c02730 a1fbe9698499cdc93bd0f75ffd1a2e55 371 Gene3D G3DSA:3.40.50.2000 15 360 1.4E-72 T 14-10-2018 Tph_c02020 951dc49e6d63c0e89cf7e5c271d1eee8 717 SUPERFAMILY SSF55383 638 708 5.49E-19 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c02020 951dc49e6d63c0e89cf7e5c271d1eee8 717 Pfam PF07833 Copper amine oxidase N-terminal domain 590 636 1.6E-10 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c02020 951dc49e6d63c0e89cf7e5c271d1eee8 717 Pfam PF07833 Copper amine oxidase N-terminal domain 639 714 1.8E-18 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c02020 951dc49e6d63c0e89cf7e5c271d1eee8 717 Gene3D G3DSA:3.30.457.10 584 636 1.2E-7 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c02020 951dc49e6d63c0e89cf7e5c271d1eee8 717 Gene3D G3DSA:3.30.457.10 637 704 2.7E-15 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c02020 951dc49e6d63c0e89cf7e5c271d1eee8 717 SUPERFAMILY SSF55383 594 636 3.92E-9 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c06070 f66aacd95e32fd5393dcc477a3ad979e 240 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 7 197 1.4E-43 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 Tph_c06070 f66aacd95e32fd5393dcc477a3ad979e 240 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 7 185 7.6E-38 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 Pfam PF00771 FHIPEP family 27 675 1.1E-273 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 Gene3D G3DSA:1.10.8.540 495 583 2.4E-30 T 14-10-2018 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 137 160 - T 14-10-2018 IPR025505 FHIPEP conserved site Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PIRSF PIRSF005419 5 688 6.9E-270 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 Gene3D G3DSA:1.10.490.80 585 683 4.4E-25 T 14-10-2018 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 16 683 4.7E-266 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 151 169 6.7E-51 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 232 246 6.7E-51 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 70 89 6.7E-51 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 132 148 6.7E-51 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 181 198 6.7E-51 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 33 46 6.7E-51 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Tph_c11020 143f92b6b1dd834d6f33c6fb759cd475 688 Gene3D G3DSA:3.40.30.60 353 494 7.0E-56 T 14-10-2018 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 Gene3D G3DSA:3.40.50.12160 8 136 8.8E-34 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 SMART SM00729 152 370 8.0E-65 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 7 446 71.774 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 156 176 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 Gene3D G3DSA:3.80.30.20 150 383 3.6E-97 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 Pfam PF04055 Radical SAM superfamily 156 328 3.1E-35 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 9 443 6.3E-167 T 14-10-2018 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 SUPERFAMILY SSF102114 143 374 4.97E-64 T 14-10-2018 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 Pfam PF00919 Uncharacterized protein family UPF0004 9 109 5.4E-27 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 Pfam PF01938 TRAM domain 387 444 1.8E-10 T 14-10-2018 IPR002792 TRAM domain Tph_c13910 ac0fe2f1f3525a12d2ad75f40457915c 459 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 442 2.9E-158 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Tph_c18740 b1c90d0064b67b04f5745e76f578dd65 335 SUPERFAMILY SSF49503 17 157 1.18E-10 T 14-10-2018 IPR008972 Cupredoxin Tph_c18740 b1c90d0064b67b04f5745e76f578dd65 335 SUPERFAMILY SSF49503 196 333 1.1E-15 T 14-10-2018 IPR008972 Cupredoxin Tph_c18740 b1c90d0064b67b04f5745e76f578dd65 335 Gene3D G3DSA:2.60.40.420 7 335 3.1E-44 T 14-10-2018 IPR008972 Cupredoxin Tph_c18740 b1c90d0064b67b04f5745e76f578dd65 335 Pfam PF00394 Multicopper oxidase 205 318 5.4E-5 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Tph_c08770 a6f3e8874d62f4e0af29fd42102f0f56 547 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 52 514 1.4E-186 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Tph_c08770 a6f3e8874d62f4e0af29fd42102f0f56 547 PIRSF PIRSF005690 38 530 4.9E-171 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Tph_c01490 88d0687b0c6693e33395e9b8eccc5113 169 SUPERFAMILY SSF52540 6 162 1.08E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01490 88d0687b0c6693e33395e9b8eccc5113 169 Gene3D G3DSA:3.40.50.300 3 166 7.5E-55 T 14-10-2018 Tph_c01490 88d0687b0c6693e33395e9b8eccc5113 169 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 136 1.7E-48 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tph_c01490 88d0687b0c6693e33395e9b8eccc5113 169 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 159 3.6E-47 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tph_c19300 b3ce57b45e0d1448d3d4ac114a4e1a77 399 Pfam PF01609 Transposase DDE domain 41 328 1.1E-11 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c19300 b3ce57b45e0d1448d3d4ac114a4e1a77 399 SUPERFAMILY SSF53098 265 348 3.57E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c13840 0df280fb293e4b0de8f498b8ff78d432 90 Pfam PF17209 Hfq protein 8 70 4.5E-33 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Tph_c13840 0df280fb293e4b0de8f498b8ff78d432 90 Gene3D G3DSA:2.30.30.100 1 75 2.9E-32 T 14-10-2018 Tph_c13840 0df280fb293e4b0de8f498b8ff78d432 90 SUPERFAMILY SSF50182 8 66 6.34E-24 T 14-10-2018 IPR010920 LSM domain superfamily Tph_c13840 0df280fb293e4b0de8f498b8ff78d432 90 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 29.049 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Tph_c13840 0df280fb293e4b0de8f498b8ff78d432 90 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 66 4.7E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 Tph_c21000 458fd4b2f5f4115ee35ef36d87eb97c7 120 SUPERFAMILY SSF103481 44 119 1.7E-13 T 14-10-2018 Tph_c21000 458fd4b2f5f4115ee35ef36d87eb97c7 120 Gene3D G3DSA:1.10.3730.20 25 120 3.9E-7 T 14-10-2018 Tph_c21000 458fd4b2f5f4115ee35ef36d87eb97c7 120 Pfam PF00892 EamA-like transporter family 51 119 4.8E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 Pfam PF13545 Crp-like helix-turn-helix domain 155 228 5.7E-15 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 SMART SM00100 18 139 6.7E-17 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 Gene3D G3DSA:2.60.120.1460 25 231 2.8E-58 T 14-10-2018 Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 SUPERFAMILY SSF51206 12 150 7.33E-33 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 SMART SM00419 174 222 1.9E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 Pfam PF00027 Cyclic nucleotide-binding domain 37 122 3.7E-22 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain Tph_c29170 846b5e2edaf4c7bba8cf4f27d7f4fb02 233 SUPERFAMILY SSF46785 152 230 6.67E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c17420 a9d7aa31a84f43e787516f427894a0b4 42 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 8 41 7.8E-14 T 14-10-2018 IPR009229 Staphylococcal AgrD Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Hamap MF_00577 Urocanate hydratase [hutU]. 59 658 43.262 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 TIGRFAM TIGR01228 hutU: urocanate hydratase 101 641 4.2E-133 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 SUPERFAMILY SSF111326 88 647 6.54E-228 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 PIRSF PIRSF001423 79 655 2.4E-179 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 ProSitePatterns PS01233 Urocanase signature. 538 553 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Pfam PF17392 Urocanase C-terminal domain 445 640 1.4E-83 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Pfam PF17391 Urocanase N-terminal domain 88 214 8.4E-51 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Pfam PF01175 Urocanase Rossmann-like domain 217 440 1.2E-83 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Gene3D G3DSA:3.40.1770.10 88 222 9.4E-44 T 14-10-2018 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Gene3D G3DSA:3.40.1770.10 446 649 1.2E-89 T 14-10-2018 Tph_c20340 cb36c883976a6dac82ab05f98c38a54a 678 Gene3D G3DSA:3.40.50.10730 223 439 2.5E-79 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c28260 0dcf1e0959f29b6bb78ba39889032558 338 Gene3D G3DSA:3.10.50.40 189 283 5.4E-45 T 14-10-2018 Tph_c28260 0dcf1e0959f29b6bb78ba39889032558 338 SUPERFAMILY SSF54534 187 284 4.45E-21 T 14-10-2018 Tph_c28260 0dcf1e0959f29b6bb78ba39889032558 338 Pfam PF13145 PPIC-type PPIASE domain 169 295 2.2E-14 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Tph_c28260 0dcf1e0959f29b6bb78ba39889032558 338 Pfam PF13624 SurA N-terminal domain 38 160 2.2E-21 T 14-10-2018 Tph_c28260 0dcf1e0959f29b6bb78ba39889032558 338 Gene3D G3DSA:1.10.4030.30 41 299 5.4E-45 T 14-10-2018 Tph_c28260 0dcf1e0959f29b6bb78ba39889032558 338 SUPERFAMILY SSF109998 39 218 9.22E-33 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tph_c15700 0c8fcafb2b54f2eb3bd890af61baccad 216 SMART SM00563 34 146 5.1E-43 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tph_c15700 0c8fcafb2b54f2eb3bd890af61baccad 216 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 24 143 8.0E-35 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 Tph_c15700 0c8fcafb2b54f2eb3bd890af61baccad 216 SUPERFAMILY SSF69593 5 191 2.22E-53 T 14-10-2018 Tph_c15700 0c8fcafb2b54f2eb3bd890af61baccad 216 Pfam PF01553 Acyltransferase 21 142 2.0E-32 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Tph_c18460 48c05305a72cf7ff2aff3bd84c44eaf6 163 SUPERFAMILY SSF52833 16 162 1.79E-50 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c18460 48c05305a72cf7ff2aff3bd84c44eaf6 163 Gene3D G3DSA:3.40.30.10 80 162 1.0E-29 T 14-10-2018 Tph_c18460 48c05305a72cf7ff2aff3bd84c44eaf6 163 Gene3D G3DSA:1.10.10.1590 12 79 8.4E-17 T 14-10-2018 Tph_c18460 48c05305a72cf7ff2aff3bd84c44eaf6 163 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 20 162 9.3E-51 T 14-10-2018 Tph_c18460 48c05305a72cf7ff2aff3bd84c44eaf6 163 PIRSF PIRSF000216 5 163 7.7E-58 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 8 526 2.8E-238 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 SMART SM00917 378 524 1.9E-42 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 Gene3D G3DSA:3.20.20.70 8 329 4.2E-114 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 15 31 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 SUPERFAMILY SSF110921 416 522 7.72E-24 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 Pfam PF08502 LeuA allosteric (dimerisation) domain 379 524 3.7E-30 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 Pfam PF00682 HMGL-like 8 278 5.5E-46 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 Gene3D G3DSA:3.30.160.270 379 522 1.5E-6 T 14-10-2018 Tph_c19800 539ab67b359ff95b692200cf72cd4519 532 SUPERFAMILY SSF51569 4 296 2.56E-87 T 14-10-2018 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 SMART SM00941 345 419 7.6E-30 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 SUPERFAMILY SSF52418 70 329 1.31E-83 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 Gene3D G3DSA:3.90.1170.30 331 421 1.8E-141 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 Gene3D G3DSA:1.20.970.10 1 67 1.4E-27 T 14-10-2018 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 PIRSF PIRSF000478 1 433 1.2E-157 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 SUPERFAMILY SSF47648 1 69 1.1E-20 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 Gene3D G3DSA:3.40.1030.10 77 330 1.8E-141 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 304 1.4E-34 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 416 1.6E-22 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 1.2E-19 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 SUPERFAMILY SSF54680 332 433 2.09E-30 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c16060 1bfdb1a76eff5fe062f6c76d814e6b80 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 418 5.5E-165 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 Tph_c26360 9eb6c308d910c1a62010397d7cb89ef4 132 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 130 5.0E-26 T 14-10-2018 IPR010005 Formate hydrogenlyase maturation HycH Tph_c26360 9eb6c308d910c1a62010397d7cb89ef4 132 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 130 4.7E-42 T 14-10-2018 IPR010005 Formate hydrogenlyase maturation HycH Tph_c00870 61896990f9e1716773354437b8b10d35 215 Gene3D G3DSA:3.40.50.1390 59 214 1.2E-24 T 14-10-2018 Tph_c00870 61896990f9e1716773354437b8b10d35 215 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c00870 61896990f9e1716773354437b8b10d35 215 SMART SM00857 62 209 1.2E-27 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c00870 61896990f9e1716773354437b8b10d35 215 ProSitePatterns PS00397 Site-specific recombinases active site. 65 73 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Tph_c00870 61896990f9e1716773354437b8b10d35 215 SUPERFAMILY SSF46955 4 50 5.04E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c00870 61896990f9e1716773354437b8b10d35 215 Pfam PF00239 Resolvase, N terminal domain 62 191 3.2E-23 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c00870 61896990f9e1716773354437b8b10d35 215 SMART SM00422 4 67 6.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c00870 61896990f9e1716773354437b8b10d35 215 SUPERFAMILY SSF53041 62 194 2.22E-23 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c00870 61896990f9e1716773354437b8b10d35 215 Pfam PF00376 MerR family regulatory protein 5 41 1.0E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c00870 61896990f9e1716773354437b8b10d35 215 Gene3D G3DSA:1.10.1660.10 1 58 1.7E-13 T 14-10-2018 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 Gene3D G3DSA:3.10.310.10 123 269 3.5E-109 T 14-10-2018 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 278 4.9E-90 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 Pfam PF01678 Diaminopimelate epimerase 3 126 3.9E-30 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 Pfam PF01678 Diaminopimelate epimerase 158 270 1.5E-29 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 SUPERFAMILY SSF54506 1 134 3.31E-36 T 14-10-2018 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 279 38.48 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 SUPERFAMILY SSF54506 144 277 7.99E-51 T 14-10-2018 Tph_c14380 9d8ea3cd69646725e0900cfb9d7a10ab 299 Gene3D G3DSA:3.10.310.10 3 275 3.5E-109 T 14-10-2018 Tph_c06700 3412a3325f686811895ba04aae3756bd 348 Pfam PF01933 Uncharacterised protein family UPF0052 25 310 2.0E-111 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Tph_c06700 3412a3325f686811895ba04aae3756bd 348 SUPERFAMILY SSF142338 22 329 6.93E-108 T 14-10-2018 Tph_c06700 3412a3325f686811895ba04aae3756bd 348 Hamap MF_00973 Gluconeogenesis factor. 21 334 37.322 T 14-10-2018 IPR010119 Gluconeogenesis factor Tph_c06700 3412a3325f686811895ba04aae3756bd 348 Gene3D G3DSA:3.40.50.12300 21 334 1.3E-129 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily Tph_c06700 3412a3325f686811895ba04aae3756bd 348 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 25 331 3.8E-121 T 14-10-2018 IPR010119 Gluconeogenesis factor Tph_c23880 f163cec34aebb53a3dd3b50f33f26e89 198 Pfam PF02441 Flavoprotein 4 167 7.0E-28 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tph_c23880 f163cec34aebb53a3dd3b50f33f26e89 198 Gene3D G3DSA:3.40.50.1950 4 196 3.2E-82 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c23880 f163cec34aebb53a3dd3b50f33f26e89 198 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 4 188 38.727 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Tph_c23880 f163cec34aebb53a3dd3b50f33f26e89 198 SUPERFAMILY SSF52507 4 188 1.83E-65 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c23880 f163cec34aebb53a3dd3b50f33f26e89 198 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 186 2.0E-79 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Tph_c01050 773dc8ada19e6f6b3c37a2c04cb338e1 262 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 7 234 1.3E-10 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c01050 773dc8ada19e6f6b3c37a2c04cb338e1 262 PIRSF PIRSF005647 2 258 5.0E-65 T 14-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Tph_c01050 773dc8ada19e6f6b3c37a2c04cb338e1 262 Gene3D G3DSA:3.40.50.300 3 256 5.3E-38 T 14-10-2018 Tph_c01050 773dc8ada19e6f6b3c37a2c04cb338e1 262 SUPERFAMILY SSF52540 1 257 1.72E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12430 42449bfb0bc1e61ffc48c5ada3b418c9 351 Gene3D G3DSA:1.10.1610.10 10 337 5.9E-133 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c12430 42449bfb0bc1e61ffc48c5ada3b418c9 351 SUPERFAMILY SSF52733 4 346 7.59E-116 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c12430 42449bfb0bc1e61ffc48c5ada3b418c9 351 Gene3D G3DSA:3.40.50.10210 56 328 5.9E-133 T 14-10-2018 Tph_c12430 42449bfb0bc1e61ffc48c5ada3b418c9 351 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 13 345 4.0E-134 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c12430 42449bfb0bc1e61ffc48c5ada3b418c9 351 Pfam PF02277 Phosphoribosyltransferase 10 345 9.2E-135 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c12430 42449bfb0bc1e61ffc48c5ada3b418c9 351 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 347 36.821 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 SUPERFAMILY SSF63380 1 89 6.21E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 Pfam PF00677 Lumazine binding domain 99 183 2.2E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 Pfam PF00677 Lumazine binding domain 3 85 2.4E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 SUPERFAMILY SSF63380 92 196 1.45E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 PIRSF PIRSF000498 1 210 3.7E-73 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 Gene3D G3DSA:2.40.30.20 101 203 3.1E-32 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 9.3E-69 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14040 895234339d91c487fa30e3a87eb6a814 216 Gene3D G3DSA:2.40.30.20 1 88 1.9E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 SUPERFAMILY SSF54862 309 394 5.31E-19 T 14-10-2018 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 Pfam PF00037 4Fe-4S binding domain 370 391 1.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 Pfam PF01180 Dihydroorotate dehydrogenase 4 305 8.7E-28 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 SUPERFAMILY SSF51395 1 322 2.15E-48 T 14-10-2018 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 376 387 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 94 321 5.8E-45 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 Gene3D G3DSA:3.30.70.20 325 367 1.1E-5 T 14-10-2018 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 Gene3D G3DSA:3.30.70.20 368 396 5.6E-6 T 14-10-2018 Tph_c23940 2e708fe98f2cb88b463f5b21a36e5758 397 Gene3D G3DSA:3.20.20.70 4 312 1.5E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c17870 f6b3ff571a67de511ab73e99a454b7ec 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 6 249 5.0E-106 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Tph_c17870 f6b3ff571a67de511ab73e99a454b7ec 256 SUPERFAMILY SSF110399 3 237 2.75E-77 T 14-10-2018 Tph_c17870 f6b3ff571a67de511ab73e99a454b7ec 256 Gene3D G3DSA:3.20.20.70 2 255 7.7E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c17870 f6b3ff571a67de511ab73e99a454b7ec 256 Hamap MF_00443 Thiazole synthase [thiG]. 4 255 41.302 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Tph_c06360 7de5d4bcde8f6d36463a9970a2c1c4a9 474 Gene3D G3DSA:1.10.645.10 1 473 2.5E-197 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c06360 7de5d4bcde8f6d36463a9970a2c1c4a9 474 SUPERFAMILY SSF56762 3 460 6.93E-152 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c06360 7de5d4bcde8f6d36463a9970a2c1c4a9 474 Pfam PF00374 Nickel-dependent hydrogenase 38 117 1.6E-34 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tph_c06360 7de5d4bcde8f6d36463a9970a2c1c4a9 474 Pfam PF00374 Nickel-dependent hydrogenase 124 460 1.8E-108 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tph_c06360 7de5d4bcde8f6d36463a9970a2c1c4a9 474 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 38 63 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tph_c06360 7de5d4bcde8f6d36463a9970a2c1c4a9 474 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 451 460 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 Tph_c09400 2b66ac808c6a3110d9cc7b2934c0fa6b 252 Gene3D G3DSA:3.40.50.300 1 238 1.6E-45 T 14-10-2018 Tph_c09400 2b66ac808c6a3110d9cc7b2934c0fa6b 252 Pfam PF00005 ABC transporter 17 157 9.8E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c09400 2b66ac808c6a3110d9cc7b2934c0fa6b 252 SUPERFAMILY SSF52540 2 177 1.26E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09400 2b66ac808c6a3110d9cc7b2934c0fa6b 252 SMART SM00382 26 231 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17730 dd63f82ed27f2220fdccd734f5543177 82 Gene3D G3DSA:3.40.50.10240 1 80 2.1E-12 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17730 dd63f82ed27f2220fdccd734f5543177 82 SMART SM00983 14 73 6.0E-7 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17730 dd63f82ed27f2220fdccd734f5543177 82 SUPERFAMILY SSF63862 14 77 8.11E-7 T 14-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17730 dd63f82ed27f2220fdccd734f5543177 82 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 16 67 2.6E-7 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c15990 0bbdf92cb8e67d1a7212677ef35fd11d 336 SUPERFAMILY SSF53901 58 287 2.71E-15 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c15990 0bbdf92cb8e67d1a7212677ef35fd11d 336 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 7 333 7.7E-139 T 14-10-2018 IPR010894 Stage V sporulation AD Tph_c15990 0bbdf92cb8e67d1a7212677ef35fd11d 336 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 6 333 1.6E-146 T 14-10-2018 IPR010894 Stage V sporulation AD Tph_c15990 0bbdf92cb8e67d1a7212677ef35fd11d 336 Gene3D G3DSA:3.40.47.40 2 336 1.1E-142 T 14-10-2018 IPR038369 Stage V sporulation AD superfamily Tph_c15990 0bbdf92cb8e67d1a7212677ef35fd11d 336 PIRSF PIRSF011570 2 336 4.5E-146 T 14-10-2018 IPR010894 Stage V sporulation AD Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 Pfam PF02607 B12 binding domain 8 80 4.0E-19 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 Gene3D G3DSA:3.40.50.280 83 215 5.5E-45 T 14-10-2018 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 SUPERFAMILY SSF47644 4 84 2.62E-18 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 SMART SM01018 4 87 2.7E-20 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 SUPERFAMILY SSF52242 72 214 9.55E-42 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 Pfam PF02310 B12 binding domain 94 206 2.9E-23 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 Gene3D G3DSA:1.10.1240.10 3 82 2.8E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27700 5a755716cdc9156bbe85f2fbcd6dfa7f 215 TIGRFAM TIGR02370 pyl_corrinoid: methyltransferase cognate corrinoid proteins, Methanosarcina family 10 205 1.0E-69 T 14-10-2018 IPR012741 Methyltransferase cognate corrinoid protein GO:0015948|GO:0031419|GO:0050897 Tph_c23180 0b7299b51328cea4c246420744759d4a 888 Pfam PF14528 LAGLIDADG-like domain 305 373 2.2E-7 T 14-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Tph_c23180 0b7299b51328cea4c246420744759d4a 888 Pfam PF03354 Phage Terminase 460 871 4.8E-67 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type Tph_c23180 0b7299b51328cea4c246420744759d4a 888 SUPERFAMILY SSF51294 103 235 2.2E-5 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Tph_c23180 0b7299b51328cea4c246420744759d4a 888 SUPERFAMILY SSF55608 287 373 1.19E-14 T 14-10-2018 IPR027434 Homing endonuclease Tph_c23180 0b7299b51328cea4c246420744759d4a 888 Gene3D G3DSA:3.40.50.300 439 582 1.4E-13 T 14-10-2018 Tph_c23180 0b7299b51328cea4c246420744759d4a 888 Gene3D G3DSA:3.10.28.10 211 397 2.4E-33 T 14-10-2018 IPR027434 Homing endonuclease Tph_c23180 0b7299b51328cea4c246420744759d4a 888 PRINTS PR00379 Intein signature 224 236 4.9E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Tph_c23180 0b7299b51328cea4c246420744759d4a 888 PRINTS PR00379 Intein signature 333 348 4.9E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Tph_c23180 0b7299b51328cea4c246420744759d4a 888 PRINTS PR00379 Intein signature 305 317 4.9E-6 T 14-10-2018 IPR006142 Intein GO:0016539 Tph_c10020 b4195da6d1ac7d40e2f78c9558ef338d 197 SMART SM00986 37 183 3.0E-39 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tph_c10020 b4195da6d1ac7d40e2f78c9558ef338d 197 SMART SM00987 37 183 3.0E-39 T 14-10-2018 Tph_c10020 b4195da6d1ac7d40e2f78c9558ef338d 197 Gene3D G3DSA:3.40.470.10 12 197 8.1E-70 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tph_c10020 b4195da6d1ac7d40e2f78c9558ef338d 197 Pfam PF03167 Uracil DNA glycosylase superfamily 37 183 1.9E-46 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tph_c10020 b4195da6d1ac7d40e2f78c9558ef338d 197 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 23 188 1.6E-64 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Tph_c10020 b4195da6d1ac7d40e2f78c9558ef338d 197 SUPERFAMILY SSF52141 8 189 3.92E-63 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 Gene3D G3DSA:1.10.1240.10 67 145 5.9E-11 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 Pfam PF02310 B12 binding domain 156 268 2.7E-23 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 SUPERFAMILY SSF47644 66 149 3.14E-13 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 Pfam PF02607 B12 binding domain 72 143 2.8E-8 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 SUPERFAMILY SSF52242 142 276 5.76E-41 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 Gene3D G3DSA:3.40.50.280 146 277 5.8E-46 T 14-10-2018 Tph_c03620 960655e60a028bcaddf0a7e0d8cb18f6 280 SMART SM01018 68 151 3.0E-12 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c06590 370afa6ae673fd7822651b927f696e70 416 Gene3D G3DSA:2.30.42.10 291 375 6.8E-13 T 14-10-2018 Tph_c06590 370afa6ae673fd7822651b927f696e70 416 Pfam PF13180 PDZ domain 305 362 8.0E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c06590 370afa6ae673fd7822651b927f696e70 416 SMART SM00228 280 364 6.8E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c06590 370afa6ae673fd7822651b927f696e70 416 SUPERFAMILY SSF50156 301 359 2.89E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 SUPERFAMILY SSF53807 5 468 7.32E-136 T 14-10-2018 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 Gene3D G3DSA:3.40.50.1980 47 197 3.3E-154 T 14-10-2018 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 144 158 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 Gene3D G3DSA:3.40.50.1980 14 467 3.3E-154 T 14-10-2018 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 Gene3D G3DSA:3.40.50.1980 198 340 3.3E-154 T 14-10-2018 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 65 72 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 TIGRFAM TIGR01284 alt_nitrog_alph: nitrogenase alpha chain 6 468 1.1E-161 T 14-10-2018 IPR005974 Nitrogenase alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 46 461 2.4E-125 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Tph_c08680 34f4161e300e59f2f72d03b9203722c1 482 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 14 467 3.4E-165 T 14-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 SUPERFAMILY SSF55620 2 184 4.89E-77 T 14-10-2018 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 2 184 41.727 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 111 121 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 Gene3D G3DSA:3.30.1130.10 52 185 3.8E-62 T 14-10-2018 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 Gene3D G3DSA:1.10.286.10 1 51 2.0E-20 T 14-10-2018 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 Pfam PF01227 GTP cyclohydrolase I 8 183 7.5E-79 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tph_c14930 14664396bf30e659dfdaa40eb432ab99 187 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 184 1.6E-75 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Tph_c17300 cffac8f7449a8221856b5715950e34e1 387 Gene3D G3DSA:3.90.1150.10 7 376 1.1E-155 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c17300 cffac8f7449a8221856b5715950e34e1 387 Pfam PF00266 Aminotransferase class-V 7 369 4.6E-84 T 14-10-2018 IPR000192 Aminotransferase class V domain Tph_c17300 cffac8f7449a8221856b5715950e34e1 387 SUPERFAMILY SSF53383 7 378 4.21E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c17300 cffac8f7449a8221856b5715950e34e1 387 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tph_c17300 cffac8f7449a8221856b5715950e34e1 387 Gene3D G3DSA:3.40.640.10 18 259 1.1E-155 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c17300 cffac8f7449a8221856b5715950e34e1 387 PIRSF PIRSF005572 4 384 2.7E-133 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tph_c08590 b7adeb9293771a2dc18d52effa405892 245 Pfam PF01493 GXGXG motif 18 186 5.2E-38 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Tph_c08590 b7adeb9293771a2dc18d52effa405892 245 Gene3D G3DSA:2.160.20.60 4 236 2.2E-38 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Tph_c08590 b7adeb9293771a2dc18d52effa405892 245 PIRSF PIRSF006519 1 244 2.8E-77 T 14-10-2018 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein Tph_c08590 b7adeb9293771a2dc18d52effa405892 245 SUPERFAMILY SSF69336 5 241 2.88E-52 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Tph_c23530 550676605ccbee92b2d7d172442e6b1c 98 Pfam PF01909 Nucleotidyltransferase domain 12 69 9.2E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c23530 550676605ccbee92b2d7d172442e6b1c 98 SUPERFAMILY SSF81301 7 93 1.58E-13 T 14-10-2018 Tph_c23530 550676605ccbee92b2d7d172442e6b1c 98 Gene3D G3DSA:3.30.460.10 2 98 9.0E-17 T 14-10-2018 Tph_c25250 eb128d63918b1f2bd25aaffb4cae66ad 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 31 90 6.0E-15 T 14-10-2018 IPR008792 Coenzyme PQQ synthesis D Tph_c25250 eb128d63918b1f2bd25aaffb4cae66ad 92 Gene3D G3DSA:1.10.10.1150 7 92 1.4E-9 T 14-10-2018 Tph_c03770 d6d774194c18b8bc3d1c9388c5bdc764 110 Pfam PF12788 YmaF family 16 101 4.8E-17 T 14-10-2018 IPR024307 YmaF Tph_c01600 b5a9701ded2e421355d0662f481d7576 269 PIRSF PIRSF004846 7 268 2.0E-55 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Tph_c01600 b5a9701ded2e421355d0662f481d7576 269 SUPERFAMILY SSF53850 42 266 4.62E-47 T 14-10-2018 Tph_c01600 b5a9701ded2e421355d0662f481d7576 269 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 49 263 4.4E-27 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 Tph_c01600 b5a9701ded2e421355d0662f481d7576 269 Gene3D G3DSA:3.40.190.10 121 229 6.6E-48 T 14-10-2018 Tph_c01600 b5a9701ded2e421355d0662f481d7576 269 Gene3D G3DSA:3.40.190.10 50 264 6.6E-48 T 14-10-2018 Tph_c01600 b5a9701ded2e421355d0662f481d7576 269 Pfam PF13531 Bacterial extracellular solute-binding protein 43 265 3.2E-42 T 14-10-2018 Tph_c10770 040aac074a79bf80efcc20833291b25c 265 PIRSF PIRSF011572 1 257 8.1E-85 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Tph_c10770 040aac074a79bf80efcc20833291b25c 265 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 252 2.5E-81 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Tph_c10770 040aac074a79bf80efcc20833291b25c 265 Gene3D G3DSA:3.30.450.40 1 160 4.6E-48 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c10770 040aac074a79bf80efcc20833291b25c 265 Gene3D G3DSA:1.10.10.10 161 260 2.1E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c10770 040aac074a79bf80efcc20833291b25c 265 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 264 99.143 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 Tph_c10770 040aac074a79bf80efcc20833291b25c 265 Pfam PF06018 CodY GAF-like domain 3 179 5.2E-43 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 Tph_c10770 040aac074a79bf80efcc20833291b25c 265 SUPERFAMILY SSF46785 168 256 4.74E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c10770 040aac074a79bf80efcc20833291b25c 265 Pfam PF08222 CodY helix-turn-helix domain 199 256 1.2E-28 T 14-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal Tph_c23840 3883568efb90c8213fe37fb92abe7d50 91 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 32 43 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c23840 3883568efb90c8213fe37fb92abe7d50 91 Pfam PF12838 4Fe-4S dicluster domain 32 79 1.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c23840 3883568efb90c8213fe37fb92abe7d50 91 SUPERFAMILY SSF54862 25 85 1.65E-12 T 14-10-2018 Tph_c23840 3883568efb90c8213fe37fb92abe7d50 91 Gene3D G3DSA:3.30.70.20 2 87 1.4E-10 T 14-10-2018 Tph_c23840 3883568efb90c8213fe37fb92abe7d50 91 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c27530 92f79ac5377973c70188c1371336c913 357 Gene3D G3DSA:3.90.870.10 3 216 4.1E-82 T 14-10-2018 Tph_c27530 92f79ac5377973c70188c1371336c913 357 Gene3D G3DSA:3.40.50.11030 227 357 1.3E-27 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily Tph_c27530 92f79ac5377973c70188c1371336c913 357 SUPERFAMILY SSF55821 6 212 1.07E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tph_c27530 92f79ac5377973c70188c1371336c913 357 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 11 211 6.0E-62 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Tph_c27530 92f79ac5377973c70188c1371336c913 357 PIRSF PIRSF004930 2 357 2.1E-113 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 Tph_c27530 92f79ac5377973c70188c1371336c913 357 Pfam PF03481 Putative GTP-binding controlling metal-binding 202 353 1.2E-21 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain Tph_c27530 92f79ac5377973c70188c1371336c913 357 Pfam PF01300 Telomere recombination 24 200 3.0E-54 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Tph_c04790 681d55b4f66011f3264f989489db7293 310 SUPERFAMILY SSF53659 7 298 2.55E-62 T 14-10-2018 Tph_c04790 681d55b4f66011f3264f989489db7293 310 Gene3D G3DSA:3.40.718.10 3 299 4.0E-102 T 14-10-2018 Tph_c04790 681d55b4f66011f3264f989489db7293 310 PIRSF PIRSF000428 1 302 4.0E-87 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tph_c04790 681d55b4f66011f3264f989489db7293 310 Pfam PF01515 Phosphate acetyl/butaryl transferase 80 295 2.1E-45 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tph_c04790 681d55b4f66011f3264f989489db7293 310 Pfam PF01515 Phosphate acetyl/butaryl transferase 18 73 4.7E-5 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tph_c03100 c013eb0d89d0a8fdced7afaf35284c8e 136 SUPERFAMILY SSF88723 9 136 9.53E-21 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c03100 c013eb0d89d0a8fdced7afaf35284c8e 136 Pfam PF01850 PIN domain 10 122 3.6E-7 T 14-10-2018 IPR002716 PIN domain Tph_c03100 c013eb0d89d0a8fdced7afaf35284c8e 136 Gene3D G3DSA:3.40.50.1010 6 134 4.1E-20 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 PIRSF PIRSF003101 13 424 8.3E-143 T 14-10-2018 IPR020823 Cell division protein FtsA Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 SUPERFAMILY SSF53067 213 392 6.48E-48 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Pfam PF14450 Cell division protein FtsA 221 388 7.3E-23 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Gene3D G3DSA:3.90.640.10 249 314 8.8E-123 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Gene3D G3DSA:3.30.420.40 25 385 8.8E-123 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Pfam PF02491 SHS2 domain inserted in FTSA 97 176 2.7E-29 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 SMART SM00842 22 210 2.0E-86 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 22 392 3.3E-132 T 14-10-2018 IPR020823 Cell division protein FtsA Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Gene3D G3DSA:3.30.1490.110 99 183 8.8E-123 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Gene3D G3DSA:3.30.420.40 211 366 8.8E-123 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Pfam PF14450 Cell division protein FtsA 23 207 7.9E-10 T 14-10-2018 Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 Hamap MF_02033 Cell division protein FtsA [ftsA]. 18 424 30.62 T 14-10-2018 IPR020823 Cell division protein FtsA Tph_c12690 b532d5344371a75c6ed7d54fadee807a 424 SUPERFAMILY SSF53067 22 211 3.52E-54 T 14-10-2018 Tph_c27930 afd40564a2ae50a4a2bfb567f44116a0 238 Gene3D G3DSA:3.40.50.300 3 232 6.2E-31 T 14-10-2018 Tph_c27930 afd40564a2ae50a4a2bfb567f44116a0 238 Pfam PF06745 KaiC 8 234 4.1E-29 T 14-10-2018 IPR014774 KaiC-like domain Tph_c27930 afd40564a2ae50a4a2bfb567f44116a0 238 SUPERFAMILY SSF52540 7 225 1.04E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 150 168 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 71 92 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 24 46 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 126 149 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 169 190 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 194 217 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 PRINTS PR00721 Stomatin signature 106 123 1.8E-72 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 SUPERFAMILY SSF117892 48 181 4.58E-44 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 Pfam PF01145 SPFH domain / Band 7 family 21 188 2.6E-33 T 14-10-2018 IPR001107 Band 7 domain Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 Gene3D G3DSA:3.30.479.30 45 176 1.5E-51 T 14-10-2018 Tph_c03960 245ecbafd87d8671304baa40d840a57a 267 SMART SM00244 17 174 4.0E-65 T 14-10-2018 IPR001107 Band 7 domain Tph_c19070 4a9f9eff892ae21cf8c3c8c6f2ff8da4 329 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 202 321 2.7E-18 T 14-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal Tph_c19070 4a9f9eff892ae21cf8c3c8c6f2ff8da4 329 Gene3D G3DSA:3.30.70.1900 194 325 1.4E-16 T 14-10-2018 Tph_c21020 9c2df6a471db1ba1fbc9fa4a30873461 249 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c21020 9c2df6a471db1ba1fbc9fa4a30873461 249 Gene3D G3DSA:3.40.50.300 2 243 1.0E-67 T 14-10-2018 Tph_c21020 9c2df6a471db1ba1fbc9fa4a30873461 249 SUPERFAMILY SSF52540 3 236 4.08E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21020 9c2df6a471db1ba1fbc9fa4a30873461 249 SMART SM00382 29 213 6.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c21020 9c2df6a471db1ba1fbc9fa4a30873461 249 Pfam PF00005 ABC transporter 21 165 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c12940 24ac6fef5068796b7ec738f3fe6350c9 219 SUPERFAMILY SSF57716 89 121 1.71E-9 T 14-10-2018 Tph_c12940 24ac6fef5068796b7ec738f3fe6350c9 219 Gene3D G3DSA:1.20.120.910 1 128 4.7E-35 T 14-10-2018 Tph_c12940 24ac6fef5068796b7ec738f3fe6350c9 219 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 92 116 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site Tph_c12940 24ac6fef5068796b7ec738f3fe6350c9 219 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 4 168 1.0E-56 T 14-10-2018 IPR014240 Regulatory protein, YteA family Tph_c12940 24ac6fef5068796b7ec738f3fe6350c9 219 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 87 120 5.5E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tph_c12940 24ac6fef5068796b7ec738f3fe6350c9 219 SUPERFAMILY SSF109635 1 87 6.67E-16 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 SUPERFAMILY SSF49493 272 358 5.36E-26 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Gene3D G3DSA:2.60.260.20 127 263 5.0E-38 T 14-10-2018 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Gene3D G3DSA:1.10.287.110 2 121 1.4E-39 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 SUPERFAMILY SSF49493 124 279 2.22E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Pfam PF00684 DnaJ central domain 157 221 1.6E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 SMART SM00271 5 64 1.1E-35 T 14-10-2018 IPR001623 DnaJ domain Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 383 43.263 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 PRINTS PR00625 DnaJ domain signature 44 64 8.7E-34 T 14-10-2018 IPR001623 DnaJ domain Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 PRINTS PR00625 DnaJ domain signature 64 83 8.7E-34 T 14-10-2018 IPR001623 DnaJ domain Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 PRINTS PR00625 DnaJ domain signature 26 41 8.7E-34 T 14-10-2018 IPR001623 DnaJ domain Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 PRINTS PR00625 DnaJ domain signature 8 26 8.7E-34 T 14-10-2018 IPR001623 DnaJ domain Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Pfam PF01556 DnaJ C terminal domain 130 347 5.7E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Pfam PF00226 DnaJ domain 6 69 7.7E-30 T 14-10-2018 IPR001623 DnaJ domain Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 ProSitePatterns PS00636 Nt-dnaJ domain signature. 49 68 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 SUPERFAMILY SSF57938 144 224 1.02E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 363 1.1E-144 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Gene3D G3DSA:2.10.230.10 157 221 5.0E-38 T 14-10-2018 Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 SUPERFAMILY SSF46565 2 102 1.44E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Tph_c21100 b1c10553ac742ec03cc65c2ee4a46f75 386 Gene3D G3DSA:2.60.260.20 268 375 6.5E-33 T 14-10-2018 Tph_c04310 72ffa2cdfe3fff57fa4d9127156b3a5d 98 SUPERFAMILY SSF143011 1 86 1.96E-9 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tph_c04310 72ffa2cdfe3fff57fa4d9127156b3a5d 98 Gene3D G3DSA:3.30.2310.20 1 95 1.9E-11 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tph_c04310 72ffa2cdfe3fff57fa4d9127156b3a5d 98 Pfam PF15781 ParE-like toxin of type II bacterial toxin-antitoxin system 6 92 6.3E-31 T 14-10-2018 IPR031552 Type II bacterial toxin-antitoxin system, ParE-like toxin Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 SUPERFAMILY SSF55021 177 273 6.49E-24 T 14-10-2018 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 158 180 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 Gene3D G3DSA:3.40.190.10 86 172 9.6E-54 T 14-10-2018 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 SUPERFAMILY SSF53850 3 185 2.17E-51 T 14-10-2018 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 Gene3D G3DSA:3.30.70.260 189 276 5.1E-29 T 14-10-2018 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 Pfam PF01842 ACT domain 194 253 1.8E-9 T 14-10-2018 IPR002912 ACT domain Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 Pfam PF00800 Prephenate dehydratase 4 183 2.8E-54 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 Gene3D G3DSA:3.40.190.10 6 180 9.6E-54 T 14-10-2018 Tph_c26690 e11bb1095e378eacf7153c7588d8f506 277 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 221 228 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 SUPERFAMILY SSF109604 499 673 1.2E-15 T 14-10-2018 Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 Pfam PF07697 7TM-HD extracellular 51 274 2.5E-46 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 SMART SM00471 496 653 5.7E-10 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 Pfam PF07698 7TM receptor with intracellular HD hydrolase 279 475 7.4E-44 T 14-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 Gene3D G3DSA:1.10.3210.10 473 667 1.0E-19 T 14-10-2018 Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 Pfam PF01966 HD domain 500 643 3.1E-18 T 14-10-2018 IPR006674 HD domain Tph_c22730 b7474a0626a6e88cfdfc6e5e2549f756 725 TIGRFAM TIGR00277 HDIG: HDIG domain 497 595 6.2E-25 T 14-10-2018 IPR006675 HDIG domain Tph_c11380 f9e9d30950c3ecc255bd7a51a30145db 221 Pfam PF01522 Polysaccharide deacetylase 32 151 8.6E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tph_c11380 f9e9d30950c3ecc255bd7a51a30145db 221 SUPERFAMILY SSF88713 27 219 3.46E-59 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tph_c11380 f9e9d30950c3ecc255bd7a51a30145db 221 Gene3D G3DSA:3.20.20.370 18 221 2.1E-59 T 14-10-2018 Tph_c01260 807e72ae3f20bbac23f102dfa79c9bad 359 Gene3D G3DSA:3.30.70.20 7 78 1.3E-5 T 14-10-2018 Tph_c01260 807e72ae3f20bbac23f102dfa79c9bad 359 SUPERFAMILY SSF46548 14 77 4.01E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c01260 807e72ae3f20bbac23f102dfa79c9bad 359 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 52 63 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c01260 807e72ae3f20bbac23f102dfa79c9bad 359 Pfam PF02754 Cysteine-rich domain 125 203 5.9E-8 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c01260 807e72ae3f20bbac23f102dfa79c9bad 359 Pfam PF02754 Cysteine-rich domain 236 321 1.3E-7 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c03150 1cb12b469a3a0ee357f54ff56bc37c97 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 130 11.482 T 14-10-2018 IPR022907 VapC family GO:0004540 Tph_c03150 1cb12b469a3a0ee357f54ff56bc37c97 139 SUPERFAMILY SSF88723 4 127 1.12E-20 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c03150 1cb12b469a3a0ee357f54ff56bc37c97 139 Gene3D G3DSA:3.40.50.1010 4 126 9.3E-28 T 14-10-2018 Tph_c03150 1cb12b469a3a0ee357f54ff56bc37c97 139 Pfam PF01850 PIN domain 4 124 1.1E-17 T 14-10-2018 IPR002716 PIN domain Tph_c14770 b0e1d0a09e48c845bee62a81a92a7ee4 353 Gene3D G3DSA:3.30.420.10 211 352 6.5E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c14770 b0e1d0a09e48c845bee62a81a92a7ee4 353 SUPERFAMILY SSF53098 214 346 4.93E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c14770 b0e1d0a09e48c845bee62a81a92a7ee4 353 Pfam PF00665 Integrase core domain 215 319 5.0E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c14770 b0e1d0a09e48c845bee62a81a92a7ee4 353 SUPERFAMILY SSF46689 4 93 6.09E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c14770 b0e1d0a09e48c845bee62a81a92a7ee4 353 Pfam PF13276 HTH-like domain 141 190 2.8E-18 T 14-10-2018 IPR025948 HTH-like domain Tph_c14770 b0e1d0a09e48c845bee62a81a92a7ee4 353 Pfam PF01527 Transposase 3 72 6.2E-10 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c03850 2b1a74d729b1a731037be0fd856922a2 377 SUPERFAMILY SSF88723 163 291 1.09E-25 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c03850 2b1a74d729b1a731037be0fd856922a2 377 SMART SM00670 163 270 6.5E-12 T 14-10-2018 IPR002716 PIN domain Tph_c03850 2b1a74d729b1a731037be0fd856922a2 377 Pfam PF13638 PIN domain 166 280 7.4E-5 T 14-10-2018 IPR002716 PIN domain Tph_c03850 2b1a74d729b1a731037be0fd856922a2 377 Gene3D G3DSA:3.40.50.1010 160 293 1.4E-49 T 14-10-2018 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 332 35.675 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 4.3E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 333 3.7E-138 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 Gene3D G3DSA:3.30.360.10 127 315 8.9E-137 T 14-10-2018 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 SMART SM00859 6 120 3.7E-41 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 SUPERFAMILY SSF55347 128 319 8.26E-76 T 14-10-2018 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 SUPERFAMILY SSF51735 5 156 2.36E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 Gene3D G3DSA:3.40.50.720 7 329 8.9E-137 T 14-10-2018 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 PIRSF PIRSF000148 4 337 2.1E-128 T 14-10-2018 Tph_c11450 a6378eae6f9fb7fc86774cfdc43a1559 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 318 5.8E-53 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 Pfam PF02881 SRP54-type protein, helical bundle domain 20 84 2.0E-13 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 Gene3D G3DSA:1.20.120.140 6 301 1.0E-114 T 14-10-2018 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 276 289 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 Gene3D G3DSA:3.40.50.300 102 291 1.0E-114 T 14-10-2018 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 32 302 2.4E-109 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 Pfam PF00448 SRP54-type protein, GTPase domain 102 302 8.3E-78 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 SUPERFAMILY SSF52540 95 302 2.39E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 32 303 62.896 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 SMART SM00962 102 303 1.3E-120 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 SMART SM00382 101 281 6.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 SMART SM00963 8 89 2.0E-20 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Tph_c10170 ee4d28f4cacd9323cff3509373d03106 308 SUPERFAMILY SSF47364 4 83 4.97E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 PIRSF PIRSF001492 1 513 3.5E-210 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 511 8.9E-221 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 Gene3D G3DSA:3.40.720.10 4 509 1.7E-231 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 Gene3D G3DSA:3.40.1450.10 76 310 1.7E-231 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 SUPERFAMILY SSF53649 4 511 1.44E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 512 51.448 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 Pfam PF01676 Metalloenzyme superfamily 5 499 1.1E-78 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 297 1.2E-86 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06770 f4595b15d49bbe0cfe0d1a5ab9db58bd 513 SUPERFAMILY SSF64158 76 308 2.35E-90 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 Pfam PF01546 Peptidase family M20/M25/M40 124 438 2.3E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 Gene3D G3DSA:3.30.70.360 236 359 1.1E-71 T 14-10-2018 Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 Pfam PF07687 Peptidase dimerisation domain 232 343 1.2E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 SUPERFAMILY SSF55031 238 351 4.49E-17 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 52 432 7.2E-72 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 Gene3D G3DSA:3.40.630.10 57 428 1.1E-71 T 14-10-2018 Tph_c17030 17e6193e11f1057a67042a0fae3158ea 443 SUPERFAMILY SSF53187 37 438 4.86E-59 T 14-10-2018 Tph_c25970 ab86134af84e10647ad7864072008346 244 SUPERFAMILY SSF54913 131 229 8.26E-20 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tph_c25970 ab86134af84e10647ad7864072008346 244 SMART SM00938 11 107 8.4E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c25970 ab86134af84e10647ad7864072008346 244 SMART SM00938 134 230 4.2E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c25970 ab86134af84e10647ad7864072008346 244 Gene3D G3DSA:3.30.70.120 5 106 2.8E-15 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c25970 ab86134af84e10647ad7864072008346 244 Gene3D G3DSA:3.30.70.120 131 229 3.9E-20 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c25970 ab86134af84e10647ad7864072008346 244 Pfam PF00543 Nitrogen regulatory protein P-II 134 227 6.7E-5 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c25970 ab86134af84e10647ad7864072008346 244 SUPERFAMILY SSF54913 8 111 8.58E-18 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tph_c21330 3f21843a040311be0928ce30486eccc4 125 PIRSF PIRSF036585 1 119 3.2E-30 T 14-10-2018 IPR012179 [NiFe]-hydrogenase-3-type complex Ech, subunit EchD Tph_c21330 3f21843a040311be0928ce30486eccc4 125 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 10 118 6.3E-9 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21330 3f21843a040311be0928ce30486eccc4 125 SUPERFAMILY SSF143243 7 117 1.44E-13 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c22770 6da4c56eea6dff872916a7459687098e 143 Gene3D G3DSA:1.10.1510.10 1 82 2.0E-22 T 14-10-2018 Tph_c22770 6da4c56eea6dff872916a7459687098e 143 Pfam PF09424 Yqey-like protein 1 138 1.5E-45 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 Tph_c22770 6da4c56eea6dff872916a7459687098e 143 Gene3D G3DSA:1.10.10.410 83 138 4.4E-22 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Tph_c22770 6da4c56eea6dff872916a7459687098e 143 SUPERFAMILY SSF89095 8 138 2.77E-37 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Tph_c19480 9efb16249f52394e52328ef9df294d4b 132 Gene3D G3DSA:1.10.599.10 1 132 4.8E-51 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tph_c19480 9efb16249f52394e52328ef9df294d4b 132 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 7 131 6.7E-44 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c19480 9efb16249f52394e52328ef9df294d4b 132 SUPERFAMILY SSF48310 8 131 2.35E-43 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 Pfam PF00082 Subtilase family 223 513 3.4E-38 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 SUPERFAMILY SSF52743 165 533 6.41E-54 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 SUPERFAMILY SSF49785 531 649 2.55E-23 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 Gene3D G3DSA:3.40.50.200 215 521 1.1E-64 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 Pfam PF00395 S-layer homology domain 1324 1364 6.6E-9 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 Pfam PF00395 S-layer homology domain 1255 1299 4.4E-10 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 Pfam PF00395 S-layer homology domain 1197 1237 4.3E-17 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 PRINTS PR00723 Subtilisin serine protease family (S8) signature 223 242 2.8E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 PRINTS PR00723 Subtilisin serine protease family (S8) signature 271 284 2.8E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 PRINTS PR00723 Subtilisin serine protease family (S8) signature 458 474 2.8E-10 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related Tph_c28160 1d9245289a3dc0ef88ea2634c30001f8 1376 Gene3D G3DSA:2.60.120.380 530 649 8.1E-30 T 14-10-2018 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 SUPERFAMILY SSF51338 1 422 1.33E-21 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 SUPERFAMILY SSF51556 55 366 9.29E-110 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 43.843 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 Gene3D G3DSA:2.30.40.10 9 419 4.5E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 Gene3D G3DSA:3.20.20.140 56 367 4.5E-144 T 14-10-2018 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 420 7.2E-129 T 14-10-2018 Tph_c14470 bdddf8c2a45e4e09066f45865105a5ef 440 Pfam PF01979 Amidohydrolase family 51 419 8.6E-37 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 SMART SM00072 4 186 2.2E-67 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 Gene3D G3DSA:3.30.63.10 36 95 3.3E-66 T 14-10-2018 Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 Pfam PF00625 Guanylate kinase 7 184 1.8E-45 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 Gene3D G3DSA:3.40.50.300 9 182 3.3E-66 T 14-10-2018 Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 183 2.4E-71 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 SUPERFAMILY SSF52540 5 186 1.93E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 36.311 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 Tph_c14340 e283ca97b341dc7b2981869fc67249f5 190 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 Gene3D G3DSA:3.40.50.10380 1 157 8.2E-73 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 SUPERFAMILY SSF51735 160 398 1.14E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 Gene3D G3DSA:3.40.50.720 158 390 2.7E-87 T 14-10-2018 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 Pfam PF00390 Malic enzyme, N-terminal domain 25 148 6.4E-28 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 PIRSF PIRSF000106 35 407 7.1E-84 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 SMART SM00919 160 383 2.7E-131 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 Pfam PF03949 Malic enzyme, NAD binding domain 162 382 9.7E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 PRINTS PR00072 Malic enzyme signature 77 99 1.2E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 PRINTS PR00072 Malic enzyme signature 156 172 1.2E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 PRINTS PR00072 Malic enzyme signature 187 203 1.2E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 SUPERFAMILY SSF53223 6 158 5.11E-56 T 14-10-2018 Tph_c27610 9f22eb7c43c5435b30e9a3adacbb8558 409 SMART SM01274 15 148 8.3E-80 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tph_c06690 2c1a20c08971c159ecf7f967ecf4830a 294 PIRSF PIRSF005052 7 290 6.1E-107 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Tph_c06690 2c1a20c08971c159ecf7f967ecf4830a 294 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 7 287 41.83 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Tph_c06690 2c1a20c08971c159ecf7f967ecf4830a 294 Pfam PF03668 P-loop ATPase protein family 7 287 3.4E-104 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Tph_c06690 2c1a20c08971c159ecf7f967ecf4830a 294 SUPERFAMILY SSF52540 7 160 3.27E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06690 2c1a20c08971c159ecf7f967ecf4830a 294 Gene3D G3DSA:3.40.50.300 8 161 1.1E-5 T 14-10-2018 Tph_c14400 8f3188884d2e7832b4e9775e0cc4421d 116 SUPERFAMILY SSF46785 8 107 5.89E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c14400 8f3188884d2e7832b4e9775e0cc4421d 116 Pfam PF03551 Transcriptional regulator PadR-like family 18 91 1.0E-22 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Tph_c14400 8f3188884d2e7832b4e9775e0cc4421d 116 Gene3D G3DSA:1.10.10.10 3 114 4.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c17960 20c09ef10f5d659384867d6fa89a4974 343 Pfam PF00266 Aminotransferase class-V 3 339 1.0E-82 T 14-10-2018 IPR000192 Aminotransferase class V domain Tph_c17960 20c09ef10f5d659384867d6fa89a4974 343 Gene3D G3DSA:3.40.640.10 17 268 2.3E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c17960 20c09ef10f5d659384867d6fa89a4974 343 PIRSF PIRSF005572 1 339 8.1E-55 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tph_c17960 20c09ef10f5d659384867d6fa89a4974 343 SUPERFAMILY SSF53383 3 340 2.1E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c17960 20c09ef10f5d659384867d6fa89a4974 343 Gene3D G3DSA:3.90.1150.10 3 339 2.3E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Gene3D G3DSA:1.10.10.10 3 61 4.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Pfam PF08279 HTH domain 4 58 3.8E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 SUPERFAMILY SSF46785 12 60 3.32E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Pfam PF02237 Biotin protein ligase C terminal domain 277 323 8.4E-8 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 SUPERFAMILY SSF55681 71 274 1.08E-59 T 14-10-2018 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Gene3D G3DSA:2.30.30.100 278 324 3.3E-11 T 14-10-2018 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Gene3D G3DSA:3.30.930.10 69 274 1.4E-64 T 14-10-2018 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 83 322 2.3E-63 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 SUPERFAMILY SSF50037 279 323 5.95E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 88 212 6.0E-17 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tph_c26600 108715582db0d27d37dd15247f58cb55 330 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 324 36.141 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 Tph_c13850 890868384151bfb10d7561d3fd40105a 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 288 5.8E-102 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tph_c13850 890868384151bfb10d7561d3fd40105a 314 SUPERFAMILY SSF52540 5 152 7.92E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13850 890868384151bfb10d7561d3fd40105a 314 Gene3D G3DSA:1.10.20.140 112 184 2.6E-106 T 14-10-2018 Tph_c13850 890868384151bfb10d7561d3fd40105a 314 Pfam PF01715 IPP transferase 38 284 3.9E-85 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tph_c13850 890868384151bfb10d7561d3fd40105a 314 Gene3D G3DSA:3.40.50.300 9 287 2.6E-106 T 14-10-2018 Tph_c13850 890868384151bfb10d7561d3fd40105a 314 SUPERFAMILY SSF52540 1 308 2.35E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13850 890868384151bfb10d7561d3fd40105a 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 299 30.667 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Tph_c16880 37ac0497d0ba0a1f1314f24bc9e99b2a 352 Gene3D G3DSA:1.10.8.1150 55 126 1.1E-18 T 14-10-2018 Tph_c16880 37ac0497d0ba0a1f1314f24bc9e99b2a 352 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 21 351 35.145 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Tph_c16880 37ac0497d0ba0a1f1314f24bc9e99b2a 352 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 24 349 7.2E-81 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Tph_c16880 37ac0497d0ba0a1f1314f24bc9e99b2a 352 Pfam PF02618 YceG-like family 58 347 5.2E-88 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Tph_c16880 37ac0497d0ba0a1f1314f24bc9e99b2a 352 Gene3D G3DSA:3.30.160.60 321 352 3.7E-9 T 14-10-2018 Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 283 4.7E-78 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 SUPERFAMILY SSF53335 5 284 1.64E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 Pfam PF13649 Methyltransferase domain 120 203 1.1E-8 T 14-10-2018 Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 Gene3D G3DSA:3.40.50.150 87 288 2.0E-59 T 14-10-2018 Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 287 40.901 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 8 286 5.8E-66 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Tph_c27550 ab87a6610befa07632c27a1fd6a6f4ed 288 Gene3D G3DSA:1.10.8.10 2 86 5.0E-23 T 14-10-2018 Tph_c08740 998abfe94b88f59806b56ff0f5a94c13 246 Gene3D G3DSA:3.40.50.880 2 240 5.4E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08740 998abfe94b88f59806b56ff0f5a94c13 246 Pfam PF00117 Glutamine amidotransferase class-I 25 188 2.0E-15 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c08740 998abfe94b88f59806b56ff0f5a94c13 246 SUPERFAMILY SSF52317 43 197 8.58E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c15210 028f92943c216172ab3f55ca39446531 299 Gene3D G3DSA:3.30.1180.10 155 283 3.7E-36 T 14-10-2018 Tph_c15210 028f92943c216172ab3f55ca39446531 299 Gene3D G3DSA:3.40.50.10170 1 154 1.4E-44 T 14-10-2018 Tph_c15210 028f92943c216172ab3f55ca39446531 299 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 284 1.8E-77 T 14-10-2018 IPR003797 DegV Tph_c15210 028f92943c216172ab3f55ca39446531 299 SUPERFAMILY SSF82549 3 284 9.68E-78 T 14-10-2018 Tph_c15210 028f92943c216172ab3f55ca39446531 299 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 283 1.9E-85 T 14-10-2018 IPR003797 DegV Tph_c04470 672cb0ffab58f1f24db6358248d08f95 496 Gene3D G3DSA:3.20.20.480 22 493 5.9E-158 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c04470 672cb0ffab58f1f24db6358248d08f95 496 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 18 489 2.4E-101 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 SUPERFAMILY SSF51395 91 484 2.66E-118 T 14-10-2018 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 PIRSF PIRSF500061 2 500 3.5E-190 T 14-10-2018 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 SUPERFAMILY SSF54862 2 144 8.73E-19 T 14-10-2018 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 Gene3D G3DSA:3.30.70.20 12 69 2.7E-11 T 14-10-2018 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 Pfam PF01645 Conserved region in glutamate synthase 108 468 8.5E-133 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 Gene3D G3DSA:3.20.20.70 127 497 2.2E-127 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 Pfam PF13187 4Fe-4S dicluster domain 18 64 7.2E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08560 d178cc34c0270bcc110dafd2663fef82 500 PIRSF PIRSF006429 2 500 9.7E-150 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein Tph_c07710 5c2543fff782a73155598106e33d5832 1065 Gene3D G3DSA:3.40.50.300 147 315 2.1E-9 T 14-10-2018 Tph_c07710 5c2543fff782a73155598106e33d5832 1065 SUPERFAMILY SSF52540 155 302 1.37E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c07710 5c2543fff782a73155598106e33d5832 1065 SUPERFAMILY SSF52540 158 609 3.26E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c07710 5c2543fff782a73155598106e33d5832 1065 Pfam PF04851 Type III restriction enzyme, res subunit 150 296 1.9E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Tph_c07710 5c2543fff782a73155598106e33d5832 1065 SMART SM00487 140 328 0.0091 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 Pfam PF01476 LysM domain 465 508 1.2E-13 T 14-10-2018 IPR018392 LysM domain Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 Gene3D G3DSA:3.10.350.10 463 509 3.3E-18 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 SMART SM00257 464 508 4.8E-16 T 14-10-2018 IPR018392 LysM domain Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 SUPERFAMILY SSF54106 464 508 1.7E-10 T 14-10-2018 Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 Pfam PF12673 Domain of unknown function (DUF3794) 337 413 1.1E-16 T 14-10-2018 IPR024300 Domain of unknown function DUF3794 Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 Pfam PF12673 Domain of unknown function (DUF3794) 187 266 3.8E-22 T 14-10-2018 IPR024300 Domain of unknown function DUF3794 Tph_c28430 66e9d260e4ba71231a1431438106f4af 511 Pfam PF12673 Domain of unknown function (DUF3794) 35 112 4.6E-22 T 14-10-2018 IPR024300 Domain of unknown function DUF3794 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 Gene3D G3DSA:3.40.50.10380 70 235 1.8E-73 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 Pfam PF13291 ACT domain 7 79 4.0E-7 T 14-10-2018 IPR002912 ACT domain Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 Gene3D G3DSA:3.40.50.720 236 466 4.7E-77 T 14-10-2018 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 Pfam PF00390 Malic enzyme, N-terminal domain 94 226 9.9E-32 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 SUPERFAMILY SSF51735 238 465 1.26E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 SMART SM01274 93 226 7.0E-85 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 SUPERFAMILY SSF55021 11 78 1.48E-5 T 14-10-2018 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 SUPERFAMILY SSF53223 87 236 2.66E-58 T 14-10-2018 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 ProSitePatterns PS00331 Malic enzymes signature. 234 250 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 Pfam PF03949 Malic enzyme, NAD binding domain 240 462 1.4E-26 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 SMART SM00919 238 463 2.4E-120 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Tph_c13240 e9eaa005a5d44d6b42dad8b02e6f09ec 466 PIRSF PIRSF000106 49 466 1.2E-87 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Tph_c00390 1cef8a522f1970ecbf2c082965cb3cc3 311 SUPERFAMILY SSF51261 163 309 8.89E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c00390 1cef8a522f1970ecbf2c082965cb3cc3 311 Gene3D G3DSA:2.70.70.10 152 311 4.9E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c00390 1cef8a522f1970ecbf2c082965cb3cc3 311 Pfam PF01551 Peptidase family M23 211 305 5.9E-32 T 14-10-2018 IPR016047 Peptidase M23 Tph_c22410 82f48012e7f74964f56bfab7fb76d22a 252 SMART SM00382 31 219 1.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c22410 82f48012e7f74964f56bfab7fb76d22a 252 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c22410 82f48012e7f74964f56bfab7fb76d22a 252 Pfam PF00005 ABC transporter 22 169 9.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c22410 82f48012e7f74964f56bfab7fb76d22a 252 Gene3D G3DSA:3.40.50.300 2 227 3.9E-63 T 14-10-2018 Tph_c22410 82f48012e7f74964f56bfab7fb76d22a 252 SUPERFAMILY SSF52540 6 218 8.36E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11480 6f50842d2f4ec635543d6eec8a52d1c4 72 Pfam PF14035 YlzJ-like protein 3 66 2.4E-23 T 14-10-2018 IPR025619 YlzJ-like protein Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 SUPERFAMILY SSF53738 257 365 4.32E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 SUPERFAMILY SSF53738 3 180 2.12E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 2.1E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 2.1E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 2.1E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Gene3D G3DSA:3.40.120.10 3 155 7.3E-50 T 14-10-2018 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Gene3D G3DSA:3.40.120.10 173 362 1.6E-70 T 14-10-2018 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Gene3D G3DSA:3.40.120.10 256 339 1.6E-70 T 14-10-2018 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 44.884 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 1.8E-39 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 367 4.3E-31 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 3.2E-15 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Gene3D G3DSA:3.30.310.50 370 447 1.4E-26 T 14-10-2018 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 SUPERFAMILY SSF53738 157 256 1.22E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 SUPERFAMILY SSF55957 357 442 2.09E-24 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 5.3E-181 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c19730 44b3de0226a41d8ac87990e62fa12be1 458 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 253 3.8E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Tph_c26450 1004b965301a59eed0f5757e09e09342 420 Gene3D G3DSA:3.40.50.2000 12 396 2.2E-146 T 14-10-2018 Tph_c26450 1004b965301a59eed0f5757e09e09342 420 Pfam PF00534 Glycosyl transferases group 1 221 388 1.6E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c26450 1004b965301a59eed0f5757e09e09342 420 Gene3D G3DSA:3.40.50.2000 199 395 2.2E-146 T 14-10-2018 Tph_c26450 1004b965301a59eed0f5757e09e09342 420 SUPERFAMILY SSF53756 37 409 1.02E-49 T 14-10-2018 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 Gene3D G3DSA:3.30.420.40 132 298 1.2E-123 T 14-10-2018 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 Gene3D G3DSA:3.30.420.40 6 319 1.2E-123 T 14-10-2018 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 SUPERFAMILY SSF53067 104 317 6.04E-45 T 14-10-2018 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 Pfam PF00814 Glycoprotease family 27 311 1.0E-96 T 14-10-2018 IPR000905 Gcp-like domain Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 311 3.2E-102 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 7.5E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 7.5E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 268 277 7.5E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 7.5E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 7.5E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 7.5E-48 T 14-10-2018 IPR017861 Kae1/TsaD family Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 SUPERFAMILY SSF53067 5 126 1.29E-30 T 14-10-2018 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 ProSitePatterns PS01016 Glycoprotease family signature. 99 119 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 336 63.484 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Tph_c18500 85341e784e9485b06e7edd49d1ee3a63 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 318 2.0E-130 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Tph_c25210 4f6d479ffc0a2039408ace9e6f3e7ab1 247 PIRSF PIRSF006648 22 245 3.5E-21 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c25210 4f6d479ffc0a2039408ace9e6f3e7ab1 247 Pfam PF01061 ABC-2 type transporter 25 217 9.8E-19 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Tph_c25210 4f6d479ffc0a2039408ace9e6f3e7ab1 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.0E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c25210 4f6d479ffc0a2039408ace9e6f3e7ab1 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.0E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c25210 4f6d479ffc0a2039408ace9e6f3e7ab1 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 27 48 3.0E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c25210 4f6d479ffc0a2039408ace9e6f3e7ab1 247 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 3.0E-10 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 29 270 2.6E-70 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 1 281 28.23 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 SUPERFAMILY SSF82866 94 279 3.27E-35 T 14-10-2018 Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 Gene3D G3DSA:1.20.1640.10 93 278 1.6E-9 T 14-10-2018 Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 Pfam PF07549 SecD/SecF GG Motif 23 50 5.1E-12 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 59 267 7.1E-50 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 Pfam PF02355 Protein export membrane protein 95 278 9.1E-65 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 PRINTS PR01755 Bacterial translocase SecF protein signature 28 43 9.2E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 PRINTS PR01755 Bacterial translocase SecF protein signature 137 151 9.2E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 PRINTS PR01755 Bacterial translocase SecF protein signature 218 233 9.2E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tph_c12420 cfc1b680c0ec021168e95e3f4a957ee4 285 PRINTS PR01755 Bacterial translocase SecF protein signature 185 203 9.2E-28 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 PRINTS PR01415 Ankyrin repeat signature 211 226 7.4E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 PRINTS PR01415 Ankyrin repeat signature 260 274 7.4E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Pfam PF07833 Copper amine oxidase N-terminal domain 29 73 1.5E-13 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Pfam PF07833 Copper amine oxidase N-terminal domain 47 137 1.1E-29 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SMART SM00248 277 306 4000.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SMART SM00248 142 171 3400.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SMART SM00248 174 203 6.5E-7 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SMART SM00248 210 239 0.0036 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SMART SM00248 244 273 1.8E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Gene3D G3DSA:1.25.40.20 128 210 2.0E-16 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SUPERFAMILY SSF48403 135 297 1.23E-40 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Pfam PF12796 Ankyrin repeats (3 copies) 151 241 1.8E-15 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 SUPERFAMILY SSF55383 49 132 6.54E-25 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Gene3D G3DSA:3.30.457.10 26 59 4.2E-7 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Gene3D G3DSA:3.30.457.10 60 125 9.2E-21 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Gene3D G3DSA:1.25.40.20 211 300 1.5E-28 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily Tph_c12170 6dae74baf5eb6e2f377272862840124d 444 Pfam PF00023 Ankyrin repeat 245 276 1.2E-6 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 Tph_c25120 8fd4b32520c4410941b1e827403ea23b 224 Pfam PF01618 MotA/TolQ/ExbB proton channel family 106 198 3.6E-7 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 441 1.5E-112 T 14-10-2018 Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 Gene3D G3DSA:2.40.50.140 1 81 6.2E-21 T 14-10-2018 Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 379 410 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 249 448 2.0E-23 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 Gene3D G3DSA:3.40.1350.30 130 280 1.2E-89 T 14-10-2018 Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 431 441 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 SUPERFAMILY SSF50249 12 66 1.66E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 SUPERFAMILY SSF53335 70 448 3.77E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 Pfam PF01938 TRAM domain 14 61 6.0E-6 T 14-10-2018 IPR002792 TRAM domain Tph_c23500 515c3cc0f2dfd9a216b10b1242da114a 451 Gene3D G3DSA:3.40.50.150 82 443 1.2E-89 T 14-10-2018 Tph_c17910 195b10c46bad1e23cce81e79b2e10234 147 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 135 2.6E-46 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain Tph_c17910 195b10c46bad1e23cce81e79b2e10234 147 Pfam PF01980 Uncharacterised protein family UPF0066 19 129 1.5E-30 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain Tph_c17910 195b10c46bad1e23cce81e79b2e10234 147 ProSitePatterns PS01318 TsaA-like domain signature. 77 88 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Tph_c17910 195b10c46bad1e23cce81e79b2e10234 147 Gene3D G3DSA:2.40.30.70 2 142 5.0E-43 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily Tph_c17910 195b10c46bad1e23cce81e79b2e10234 147 SUPERFAMILY SSF118196 2 143 5.49E-45 T 14-10-2018 IPR036413 YaeB-like superfamily Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 1.2E-46 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 SUPERFAMILY SSF52440 1 113 6.62E-51 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 SMART SM00878 336 442 1.9E-69 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 2 443 8.7E-224 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.6E-43 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 SUPERFAMILY SSF51246 331 442 9.42E-45 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 Gene3D G3DSA:3.30.470.130 1 445 6.2E-202 T 14-10-2018 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 SUPERFAMILY SSF56059 83 352 1.94E-70 T 14-10-2018 Tph_c16370 721814bdd1c243fd0f9b1d80727434fe 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.8E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Tph_c03920 62fa7eecb173d21289b61779b7a06edf 296 Gene3D G3DSA:3.30.2010.10 69 158 2.3E-30 T 14-10-2018 Tph_c03920 62fa7eecb173d21289b61779b7a06edf 296 Hamap MF_00188 Protease HtpX [htpX]. 13 290 27.209 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Tph_c03920 62fa7eecb173d21289b61779b7a06edf 296 Pfam PF01435 Peptidase family M48 74 290 1.1E-40 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 Gene3D G3DSA:3.30.428.10 1 113 1.2E-36 T 14-10-2018 IPR036265 HIT-like superfamily Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 Pfam PF01230 HIT domain 12 107 1.1E-24 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 14-10-2018 IPR019808 Histidine triad, conserved site Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 SUPERFAMILY SSF54197 1 111 3.12E-34 T 14-10-2018 IPR036265 HIT-like superfamily Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 PRINTS PR00332 Histidine triad family signature 5 21 3.6E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 PRINTS PR00332 Histidine triad family signature 93 103 3.6E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tph_c21060 89a7b6f3e8573bac4acff9e31bd7f18c 113 PRINTS PR00332 Histidine triad family signature 26 44 3.6E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Tph_c02320 8be06a7b5713d4aa2085ecaa160863d6 172 Gene3D G3DSA:2.30.30.40 105 171 1.5E-18 T 14-10-2018 Tph_c02320 8be06a7b5713d4aa2085ecaa160863d6 172 Pfam PF08239 Bacterial SH3 domain 118 168 3.0E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Tph_c02320 8be06a7b5713d4aa2085ecaa160863d6 172 SMART SM00287 107 171 5.2E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Tph_c18270 727f063d6022af118ffffe31acea429c 411 Gene3D G3DSA:1.10.240.10 227 335 6.8E-37 T 14-10-2018 Tph_c18270 727f063d6022af118ffffe31acea429c 411 Pfam PF01479 S4 domain 351 390 6.8E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c18270 727f063d6022af118ffffe31acea429c 411 SUPERFAMILY SSF52374 10 325 3.94E-96 T 14-10-2018 Tph_c18270 727f063d6022af118ffffe31acea429c 411 SUPERFAMILY SSF55174 307 409 4.32E-18 T 14-10-2018 Tph_c18270 727f063d6022af118ffffe31acea429c 411 Gene3D G3DSA:3.40.50.620 6 226 1.8E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c18270 727f063d6022af118ffffe31acea429c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 169 184 9.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tph_c18270 727f063d6022af118ffffe31acea429c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 219 231 9.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tph_c18270 727f063d6022af118ffffe31acea429c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 186 208 9.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tph_c18270 727f063d6022af118ffffe31acea429c 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 54 76 9.3E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tph_c18270 727f063d6022af118ffffe31acea429c 411 Pfam PF00579 tRNA synthetases class I (W and Y) 39 326 8.3E-80 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c18270 727f063d6022af118ffffe31acea429c 411 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 6 411 48.969 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 Tph_c18270 727f063d6022af118ffffe31acea429c 411 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 60 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c18270 727f063d6022af118ffffe31acea429c 411 Gene3D G3DSA:3.10.290.10 336 411 9.7E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tph_c18270 727f063d6022af118ffffe31acea429c 411 SMART SM00363 350 410 7.1E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c18270 727f063d6022af118ffffe31acea429c 411 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 11 410 3.2E-124 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Tph_c24760 95729f52d6dd96e6249bb43aa20378af 377 Gene3D G3DSA:3.30.470.20 95 377 2.4E-89 T 14-10-2018 Tph_c24760 95729f52d6dd96e6249bb43aa20378af 377 SUPERFAMILY SSF51735 2 85 5.12E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c24760 95729f52d6dd96e6249bb43aa20378af 377 TIGRFAM TIGR03909 pyrrolys_PylC: pyrrolysine biosynthesis protein PylC 4 375 8.6E-129 T 14-10-2018 IPR023890 Pyrrolysine biosynthesis protein PylC GO:0071524 Tph_c24760 95729f52d6dd96e6249bb43aa20378af 377 Gene3D G3DSA:3.40.50.720 1 93 6.3E-32 T 14-10-2018 Tph_c24760 95729f52d6dd96e6249bb43aa20378af 377 SUPERFAMILY SSF56059 87 289 4.28E-32 T 14-10-2018 Tph_c24760 95729f52d6dd96e6249bb43aa20378af 377 Pfam PF02655 ATP-grasp domain 101 256 1.8E-12 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Tph_c12210 bebe3d2a37a3e72f6e11cc98c0222674 306 Gene3D G3DSA:3.40.50.300 4 272 2.5E-55 T 14-10-2018 Tph_c12210 bebe3d2a37a3e72f6e11cc98c0222674 306 Pfam PF13614 AAA domain 53 222 6.5E-30 T 14-10-2018 IPR025669 AAA domain Tph_c12210 bebe3d2a37a3e72f6e11cc98c0222674 306 Pfam PF13614 AAA domain 4 29 2.4E-6 T 14-10-2018 IPR025669 AAA domain Tph_c12210 bebe3d2a37a3e72f6e11cc98c0222674 306 SUPERFAMILY SSF52540 1 255 2.54E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 SUPERFAMILY SSF55681 5 282 2.49E-129 T 14-10-2018 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 4 283 58.409 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 57 72 4.1E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 158 173 4.1E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 135 155 4.1E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 78 98 4.1E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 243 259 4.1E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 109 133 4.1E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 5 290 4.2E-153 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 Gene3D G3DSA:3.30.930.10 1 206 2.3E-107 T 14-10-2018 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 6 281 1.1E-149 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 Tph_c05760 28212311f452061dbc5f0e7c5c74f11d 314 Gene3D G3DSA:1.20.58.180 207 287 1.7E-34 T 14-10-2018 Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 SMART SM00257 67 111 6.2E-18 T 14-10-2018 IPR018392 LysM domain Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 SMART SM00257 121 165 3.9E-16 T 14-10-2018 IPR018392 LysM domain Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 SMART SM00257 10 54 7.0E-15 T 14-10-2018 IPR018392 LysM domain Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 Gene3D G3DSA:3.10.350.10 65 111 6.7E-20 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 Gene3D G3DSA:3.10.350.10 8 54 9.7E-21 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 SUPERFAMILY SSF54106 10 54 7.72E-11 T 14-10-2018 Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 SUPERFAMILY SSF54106 66 111 1.22E-11 T 14-10-2018 Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 Pfam PF01476 LysM domain 122 165 4.9E-12 T 14-10-2018 IPR018392 LysM domain Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 Pfam PF01476 LysM domain 68 111 6.5E-15 T 14-10-2018 IPR018392 LysM domain Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 Pfam PF01476 LysM domain 11 54 1.0E-12 T 14-10-2018 IPR018392 LysM domain Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 Gene3D G3DSA:3.10.350.10 118 165 1.6E-16 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c08100 2be6576164f67cd801f9a6c33aaca95c 169 SUPERFAMILY SSF54106 121 165 3.27E-10 T 14-10-2018 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 198 5.3E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 SUPERFAMILY SSF56784 3 232 4.61E-33 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 100 204 8.2E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 204 2.7E-16 T 14-10-2018 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 Gene3D G3DSA:3.40.50.1000 2 214 3.5E-30 T 14-10-2018 IPR023214 HAD superfamily Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 166 186 1.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 1.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 193 206 1.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c09330 0565e9b35db6d14c69a7697ad87f4c1f 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 164 1.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c19680 7a2215e14115816b9b7917132bc554aa 121 Pfam PF09585 Conserved hypothetical protein (Lin0512_fam) 5 115 4.3E-37 T 14-10-2018 IPR011719 Conserved hypothetical protein CHP02058 Tph_c19680 7a2215e14115816b9b7917132bc554aa 121 TIGRFAM TIGR02058 lin0512_fam: conserved hypothetical protein 4 115 1.2E-24 T 14-10-2018 IPR011719 Conserved hypothetical protein CHP02058 Tph_c19680 7a2215e14115816b9b7917132bc554aa 121 Gene3D G3DSA:3.30.1330.20 1 120 1.0E-38 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Tph_c18070 cd625da87eb9a4e917c2b73d39ac377e 214 Pfam PF02659 Putative manganese efflux pump 4 79 3.8E-6 T 14-10-2018 IPR003810 Putative manganese efflux pump Tph_c18070 cd625da87eb9a4e917c2b73d39ac377e 214 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 6 209 5.8E-47 T 14-10-2018 IPR014205 Sporulation protein YtaF Tph_c11130 55fc8725742b0353a008232d0a47046d 181 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 143 175 0.003 T 14-10-2018 Tph_c24120 5b795c74dcdb89713379b3f8e2cfdd24 113 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 110 1.4E-27 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c24120 5b795c74dcdb89713379b3f8e2cfdd24 113 PIRSF PIRSF033490 2 113 1.5E-33 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c24120 5b795c74dcdb89713379b3f8e2cfdd24 113 SUPERFAMILY SSF50118 5 113 2.09E-30 T 14-10-2018 Tph_c24120 5b795c74dcdb89713379b3f8e2cfdd24 113 Gene3D G3DSA:2.30.30.110 2 113 1.0E-32 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Tph_c04510 c517bd67388465c6f58965c82923bb04 280 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 277 6.2E-113 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like Tph_c04510 c517bd67388465c6f58965c82923bb04 280 PIRSF PIRSF034452 2 280 6.2E-106 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like Tph_c04510 c517bd67388465c6f58965c82923bb04 280 SUPERFAMILY SSF51621 3 196 5.02E-74 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tph_c04510 c517bd67388465c6f58965c82923bb04 280 Gene3D G3DSA:3.20.20.70 1 255 3.0E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c13410 3b44a074ae0679d61264ebdab0a70224 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 18.579 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tph_c13410 3b44a074ae0679d61264ebdab0a70224 124 TIGRFAM TIGR00494 crcB: protein CrcB 5 119 6.9E-28 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tph_c13410 3b44a074ae0679d61264ebdab0a70224 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 3.0E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tph_c04390 9c291c627ee540b218ff0aa620174cde 409 SUPERFAMILY SSF56726 217 408 1.7E-6 T 14-10-2018 IPR036078 Spo11/DNA topoisomerase VI subunit A superfamily GO:0000737|GO:0003677|GO:0005694 Reactome: R-HSA-912446 Tph_c04390 9c291c627ee540b218ff0aa620174cde 409 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 247 408 1.3E-29 T 14-10-2018 IPR024534 Domain of unknown function DUF2220 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 SUPERFAMILY SSF53732 1 417 2.62E-146 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 Gene3D G3DSA:3.30.499.20 2 268 5.9E-104 T 14-10-2018 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 ProSitePatterns PS00450 Aconitase family signature 1. 290 306 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 TIGRFAM TIGR02083 LEU2: 3-isopropylmalate dehydratase, large subunit 1 417 5.3E-221 T 14-10-2018 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 2 415 1.3E-184 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 Pfam PF00330 Aconitase family (aconitate hydratase) 5 409 6.4E-100 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 ProSitePatterns PS01244 Aconitase family signature 2. 350 363 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 1 415 2.2E-163 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 PRINTS PR00415 Aconitase family signature 112 125 8.3E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 PRINTS PR00415 Aconitase family signature 126 141 8.3E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 PRINTS PR00415 Aconitase family signature 350 363 8.3E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 PRINTS PR00415 Aconitase family signature 188 201 8.3E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 PRINTS PR00415 Aconitase family signature 202 215 8.3E-20 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 1 417 51.255 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c19830 b31c4fe2a35685e9169ceb5c679c7eaa 422 Gene3D G3DSA:3.30.499.10 271 421 4.3E-56 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tph_c11270 52b5656233f543f2c0c761d880481148 151 SUPERFAMILY SSF74942 84 149 3.79E-15 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily Tph_c11270 52b5656233f543f2c0c761d880481148 151 Gene3D G3DSA:2.30.30.180 87 150 3.5E-6 T 14-10-2018 Tph_c11270 52b5656233f543f2c0c761d880481148 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 21.023 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Tph_c11270 52b5656233f543f2c0c761d880481148 151 SUPERFAMILY SSF75420 3 83 1.7E-22 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Tph_c11270 52b5656233f543f2c0c761d880481148 151 Pfam PF02576 RimP N-terminal domain 12 83 2.3E-22 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal Tph_c11270 52b5656233f543f2c0c761d880481148 151 Pfam PF17384 RimP C-terminal SH3 domain 86 149 1.9E-14 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal Tph_c11270 52b5656233f543f2c0c761d880481148 151 Gene3D G3DSA:3.30.300.70 1 80 1.7E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily Tph_c20380 3ff35914b9d1d5e94cfb2528f753486e 308 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 303 1.5E-57 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 Tph_c20380 3ff35914b9d1d5e94cfb2528f753486e 308 Gene3D G3DSA:3.40.190.120 137 245 7.1E-90 T 14-10-2018 Tph_c20380 3ff35914b9d1d5e94cfb2528f753486e 308 Gene3D G3DSA:3.40.190.10 39 305 7.1E-90 T 14-10-2018 Tph_c20380 3ff35914b9d1d5e94cfb2528f753486e 308 SUPERFAMILY SSF53850 37 307 1.78E-65 T 14-10-2018 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Gene3D G3DSA:3.90.870.50 8 357 4.6E-150 T 14-10-2018 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Gene3D G3DSA:3.30.420.350 479 734 6.0E-128 T 14-10-2018 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Pfam PF07503 HypF finger 158 189 2.7E-13 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Pfam PF07503 HypF finger 108 141 3.4E-16 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Gene3D G3DSA:3.30.420.360 378 747 6.0E-128 T 14-10-2018 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Pfam PF01300 Telomere recombination 205 379 1.6E-56 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 SUPERFAMILY SSF55821 176 390 3.02E-50 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Gene3D G3DSA:3.30.110.120 248 366 4.6E-150 T 14-10-2018 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 Pfam PF00708 Acylphosphatase 7 88 5.0E-19 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 SUPERFAMILY SSF54975 2 90 1.0E-21 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 PIRSF PIRSF006256 1 757 4.3E-284 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Tph_c09180 39c6c3db517a0d7bf35a4394b47e8d40 766 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 748 1.0E-236 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 Tph_c15510 ec7c8f3a071c08251dfe124c1a5fd429 390 Pfam PF13439 Glycosyltransferase Family 4 28 188 7.6E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c15510 ec7c8f3a071c08251dfe124c1a5fd429 390 Gene3D G3DSA:3.40.50.2000 78 382 8.7E-76 T 14-10-2018 Tph_c15510 ec7c8f3a071c08251dfe124c1a5fd429 390 Gene3D G3DSA:3.40.50.2000 186 369 8.7E-76 T 14-10-2018 Tph_c15510 ec7c8f3a071c08251dfe124c1a5fd429 390 Pfam PF00534 Glycosyl transferases group 1 198 362 1.0E-38 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c15510 ec7c8f3a071c08251dfe124c1a5fd429 390 SUPERFAMILY SSF53756 20 386 1.88E-83 T 14-10-2018 Tph_c15150 5dffe61e6c704c746775e1a1b5f9119b 247 PIRSF PIRSF005647 3 246 2.1E-65 T 14-10-2018 IPR014433 Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type Tph_c15150 5dffe61e6c704c746775e1a1b5f9119b 247 Gene3D G3DSA:3.40.50.300 4 246 5.3E-47 T 14-10-2018 Tph_c15150 5dffe61e6c704c746775e1a1b5f9119b 247 SUPERFAMILY SSF52540 1 245 8.3E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15150 5dffe61e6c704c746775e1a1b5f9119b 247 Pfam PF13614 AAA domain 9 175 1.7E-13 T 14-10-2018 IPR025669 AAA domain Tph_c18220 4da0e2de184d2badd451242bb0187046 652 Pfam PF06202 Amylo-alpha-1,6-glucosidase 281 643 3.5E-131 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Tph_c18220 4da0e2de184d2badd451242bb0187046 652 Gene3D G3DSA:1.50.10.10 305 643 8.3E-44 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Tph_c18220 4da0e2de184d2badd451242bb0187046 652 TIGRFAM TIGR01561 gde_arch: putative glycogen debranching enzyme, archaeal type 19 583 9.9E-152 T 14-10-2018 IPR006451 Glycogen debranching enzyme, archaeal type Tph_c18220 4da0e2de184d2badd451242bb0187046 652 Pfam PF12439 Glycogen debranching enzyme N terminal 18 235 6.3E-72 T 14-10-2018 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal Tph_c18220 4da0e2de184d2badd451242bb0187046 652 SUPERFAMILY SSF48208 180 649 3.2E-84 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tph_c28710 d112d342d489f6e68a834a7ae098b00f 327 Pfam PF06725 3D domain 268 326 3.2E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 Tph_c28710 d112d342d489f6e68a834a7ae098b00f 327 Pfam PF07501 G5 domain 149 221 8.0E-18 T 14-10-2018 IPR011098 G5 domain Tph_c28710 d112d342d489f6e68a834a7ae098b00f 327 Gene3D G3DSA:2.20.230.10 99 221 4.4E-15 T 14-10-2018 Tph_c28710 d112d342d489f6e68a834a7ae098b00f 327 SMART SM01208 144 222 9.9E-21 T 14-10-2018 IPR011098 G5 domain Tph_c28710 d112d342d489f6e68a834a7ae098b00f 327 SUPERFAMILY SSF50685 267 317 4.19E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily Tph_c09200 fd38f16c32ffaf5175fd992803a31650 364 Gene3D G3DSA:1.10.10.2140 307 358 1.2E-24 T 14-10-2018 Tph_c09200 fd38f16c32ffaf5175fd992803a31650 364 Gene3D G3DSA:3.40.50.11750 16 253 8.8E-116 T 14-10-2018 Tph_c09200 fd38f16c32ffaf5175fd992803a31650 364 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 14 359 1.9E-138 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tph_c09200 fd38f16c32ffaf5175fd992803a31650 364 Gene3D G3DSA:3.40.50.11740 56 293 8.8E-116 T 14-10-2018 Tph_c09200 fd38f16c32ffaf5175fd992803a31650 364 PIRSF PIRSF005622 1 361 3.7E-151 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tph_c09200 fd38f16c32ffaf5175fd992803a31650 364 Pfam PF01924 Hydrogenase formation hypA family 13 356 5.4E-149 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 Tph_c13180 707adc9f53e989cbe4294a2b66fa577c 241 PIRSF PIRSF004976 1 241 1.2E-63 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Tph_c13180 707adc9f53e989cbe4294a2b66fa577c 241 Gene3D G3DSA:3.40.50.620 1 239 2.5E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c13180 707adc9f53e989cbe4294a2b66fa577c 241 SUPERFAMILY SSF52402 16 238 4.19E-51 T 14-10-2018 Tph_c13180 707adc9f53e989cbe4294a2b66fa577c 241 Pfam PF01171 PP-loop family 30 207 1.7E-17 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SUPERFAMILY SSF54106 245 288 1.2E-11 T 14-10-2018 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:1.10.10.2520 309 388 3.3E-30 T 14-10-2018 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:3.10.350.10 128 172 7.5E-17 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:3.10.350.10 75 119 1.9E-18 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:3.10.350.10 243 288 5.1E-18 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:3.10.350.10 188 233 9.6E-20 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:3.10.350.10 30 74 4.1E-13 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Pfam PF01476 LysM domain 191 233 5.0E-18 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Pfam PF01476 LysM domain 130 172 7.2E-16 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Pfam PF01476 LysM domain 32 74 1.2E-11 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Pfam PF01476 LysM domain 77 119 9.7E-17 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Pfam PF01476 LysM domain 246 288 3.2E-16 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SUPERFAMILY SSF54106 189 233 7.19E-13 T 14-10-2018 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Pfam PF07486 Cell Wall Hydrolase 325 423 1.7E-26 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 Gene3D G3DSA:2.40.10.420 389 424 3.0E-10 T 14-10-2018 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SMART SM00257 129 172 9.9E-16 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SMART SM00257 190 233 4.8E-18 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SMART SM00257 245 288 6.6E-15 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SMART SM00257 31 74 9.4E-12 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SMART SM00257 76 119 2.2E-17 T 14-10-2018 IPR018392 LysM domain Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SUPERFAMILY SSF54106 129 172 1.83E-11 T 14-10-2018 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SUPERFAMILY SSF54106 76 119 2.09E-12 T 14-10-2018 Tph_c18470 d559b1f77d8664400e59ace2697a349f 424 SUPERFAMILY SSF54106 31 74 5.75E-10 T 14-10-2018 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 Gene3D G3DSA:2.60.40.730 40 125 4.5E-28 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 SUPERFAMILY SSF49367 34 125 5.89E-30 T 14-10-2018 IPR036073 Desulfoferrodoxin, ferrous iron-binding domain superfamily GO:0005506|GO:0016491|GO:0055114 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 Pfam PF06397 Desulfoferrodoxin, N-terminal domain 7 36 1.6E-14 T 14-10-2018 IPR004462 Desulforodoxin domain GO:0005506 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 Gene3D G3DSA:2.20.28.100 1 38 6.9E-14 T 14-10-2018 IPR038094 Desulforodoxin domain superfamily Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 SUPERFAMILY SSF57802 6 37 4.08E-11 T 14-10-2018 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 TIGRFAM TIGR00319 desulf_FeS4: desulfoferrodoxin FeS4 iron-binding domain 7 34 3.2E-13 T 14-10-2018 IPR004462 Desulforodoxin domain GO:0005506 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 Pfam PF01880 Desulfoferrodoxin 44 123 3.0E-20 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 TIGRFAM TIGR00320 dfx_rbo: desulfoferrodoxin 5 124 2.6E-44 T 14-10-2018 IPR004793 Desulfoferrodoxin GO:0005506|GO:0019430 Tph_c07660 594279cb1d58cd90334676d2e21cccef 126 TIGRFAM TIGR00332 neela_ferrous: desulfoferrodoxin ferrous iron-binding domain 41 124 9.5E-20 T 14-10-2018 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain GO:0005506|GO:0016491|GO:0055114 Tph_c22270 bbee0f1da599d2b2a940469e5f844b68 426 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 1 417 1.2E-170 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c22270 bbee0f1da599d2b2a940469e5f844b68 426 Gene3D G3DSA:3.20.20.540 43 363 4.1E-132 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c22270 bbee0f1da599d2b2a940469e5f844b68 426 Pfam PF01964 Radical SAM ThiC family 2 417 1.2E-177 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c22270 bbee0f1da599d2b2a940469e5f844b68 426 TIGRFAM TIGR04386 ThiC_like_1: ThiC-like protein 1 2 424 3.2E-226 T 14-10-2018 Tph_c04890 18caf0cbbfacc2d2b8418df3ef7666ff 284 SUPERFAMILY SSF161098 20 267 1.12E-39 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c04890 18caf0cbbfacc2d2b8418df3ef7666ff 284 Gene3D G3DSA:1.10.3720.10 54 278 1.5E-34 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c04890 18caf0cbbfacc2d2b8418df3ef7666ff 284 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 10 275 5.1E-83 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 Tph_c04890 18caf0cbbfacc2d2b8418df3ef7666ff 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 276 8.0E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 Pfam PF05193 Peptidase M16 inactive domain 166 338 1.8E-41 T 14-10-2018 IPR007863 Peptidase M16, C-terminal Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 Pfam PF00675 Insulinase (Peptidase family M16) 13 159 1.2E-42 T 14-10-2018 IPR011765 Peptidase M16, N-terminal Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 SUPERFAMILY SSF63411 229 407 1.75E-49 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 Gene3D G3DSA:3.30.830.10 4 215 9.2E-75 T 14-10-2018 Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 Gene3D G3DSA:3.30.830.10 223 412 1.0E-57 T 14-10-2018 Tph_c11400 3f0ae7f566e48b03042e8edb7e702b44 420 SUPERFAMILY SSF63411 5 209 9.89E-66 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 Tph_c03410 c98cde8cf780c98b2570f3db42899c63 374 Pfam PF01497 Periplasmic binding protein 90 334 7.7E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tph_c03410 c98cde8cf780c98b2570f3db42899c63 374 SUPERFAMILY SSF53807 83 360 1.96E-42 T 14-10-2018 Tph_c03410 c98cde8cf780c98b2570f3db42899c63 374 Gene3D G3DSA:3.40.50.1980 81 371 7.0E-31 T 14-10-2018 Tph_c18760 f59f5890d6de12690f5d67e849c9392c 332 Pfam PF00394 Multicopper oxidase 196 310 4.7E-5 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 Tph_c18760 f59f5890d6de12690f5d67e849c9392c 332 SUPERFAMILY SSF49503 28 147 6.81E-23 T 14-10-2018 IPR008972 Cupredoxin Tph_c18760 f59f5890d6de12690f5d67e849c9392c 332 Gene3D G3DSA:2.60.40.420 2 328 1.1E-52 T 14-10-2018 IPR008972 Cupredoxin Tph_c18760 f59f5890d6de12690f5d67e849c9392c 332 SUPERFAMILY SSF49503 166 315 4.76E-16 T 14-10-2018 IPR008972 Cupredoxin Tph_c18760 f59f5890d6de12690f5d67e849c9392c 332 Pfam PF07732 Multicopper oxidase 47 147 1.2E-14 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 SUPERFAMILY SSF110849 14 105 1.43E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 Gene3D G3DSA:1.10.10.2830 90 204 1.0E-31 T 14-10-2018 Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 SUPERFAMILY SSF109709 95 204 3.14E-27 T 14-10-2018 Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 SMART SM00470 14 103 2.1E-32 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 Gene3D G3DSA:3.90.1530.30 27 89 4.0E-27 T 14-10-2018 Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 Pfam PF02195 ParB-like nuclease domain 15 102 1.3E-25 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c00310 e22f168697e4c3518e7a79665045ea79 271 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 11 183 2.5E-48 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Tph_c18330 f5c965802c29677ff04ce2e28a6bc6bb 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c18330 f5c965802c29677ff04ce2e28a6bc6bb 264 SMART SM00382 31 226 4.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c18330 f5c965802c29677ff04ce2e28a6bc6bb 264 SUPERFAMILY SSF52540 2 232 1.6E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c18330 f5c965802c29677ff04ce2e28a6bc6bb 264 Pfam PF00005 ABC transporter 23 177 5.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c18330 f5c965802c29677ff04ce2e28a6bc6bb 264 Gene3D G3DSA:3.40.50.300 1 256 9.3E-58 T 14-10-2018 Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 Gene3D G3DSA:3.90.1150.10 2 369 4.1E-153 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 SUPERFAMILY SSF53383 1 375 1.3E-114 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 PIRSF PIRSF005572 1 379 5.0E-135 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 Gene3D G3DSA:1.10.260.50 13 278 4.1E-153 T 14-10-2018 Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 Pfam PF00266 Aminotransferase class-V 2 362 3.8E-87 T 14-10-2018 IPR000192 Aminotransferase class V domain Tph_c19200 64a36909030fec9e600ab6f7e32ba3d1 382 Gene3D G3DSA:3.40.640.10 59 234 4.1E-153 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 PIRSF PIRSF036382 1 197 2.5E-63 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 SMART SM01012 138 193 9.5E-23 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 SMART SM00448 10 122 4.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 Gene3D G3DSA:1.10.10.10 146 196 4.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 Pfam PF03861 ANTAR domain 143 193 1.9E-20 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 Gene3D G3DSA:3.40.50.2300 1 145 8.1E-31 T 14-10-2018 Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 Pfam PF00072 Response regulator receiver domain 12 122 1.6E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c06920 c7bad83628dc638e8f27e913b6a3ee5a 198 SUPERFAMILY SSF52172 8 193 5.55E-53 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Gene3D G3DSA:3.40.50.300 567 787 9.9E-15 T 14-10-2018 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Gene3D G3DSA:3.40.50.300 332 537 3.9E-19 T 14-10-2018 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Gene3D G3DSA:3.40.960.10 986 1081 1.4E-18 T 14-10-2018 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 SUPERFAMILY SSF52540 359 968 1.17E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Pfam PF13087 AAA domain 774 960 6.9E-35 T 14-10-2018 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Pfam PF04480 Protein of unknown function (DUF559) 1011 1078 5.1E-8 T 14-10-2018 IPR007569 Protein of unknown function DUF559 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 SUPERFAMILY SSF52980 983 1081 5.36E-11 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Gene3D G3DSA:3.40.50.300 796 984 1.9E-43 T 14-10-2018 Tph_c03360 92f5db218dfc2506c88daa1f62241965 1086 Pfam PF13245 AAA domain 365 743 7.2E-9 T 14-10-2018 Tph_c19440 416682d03544a228747f3eac43a7ed69 407 Pfam PF01548 Transposase 5 165 2.4E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c19440 416682d03544a228747f3eac43a7ed69 407 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 3.1E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c04080 b347859f1e2d365b5b34974bcdd7a484 93 SUPERFAMILY SSF103007 1 93 6.28E-30 T 14-10-2018 IPR036746 TT1725-like superfamily Tph_c04080 b347859f1e2d365b5b34974bcdd7a484 93 Gene3D G3DSA:3.30.70.1120 1 93 5.8E-31 T 14-10-2018 IPR036746 TT1725-like superfamily Tph_c04080 b347859f1e2d365b5b34974bcdd7a484 93 Pfam PF04456 Protein of unknown function (DUF503) 3 89 1.0E-32 T 14-10-2018 IPR007546 Protein of unknown function DUF503 Tph_c21510 8139651721013e492f83be010f8a4080 318 Gene3D G3DSA:1.10.3210.10 102 295 2.5E-69 T 14-10-2018 Tph_c21510 8139651721013e492f83be010f8a4080 318 SUPERFAMILY SSF109604 104 290 2.47E-42 T 14-10-2018 Tph_c21510 8139651721013e492f83be010f8a4080 318 TIGRFAM TIGR00277 HDIG: HDIG domain 125 218 1.2E-7 T 14-10-2018 IPR006675 HDIG domain Tph_c21510 8139651721013e492f83be010f8a4080 318 SMART SM00471 124 259 1.4E-12 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c21510 8139651721013e492f83be010f8a4080 318 Pfam PF01966 HD domain 129 250 9.8E-21 T 14-10-2018 IPR006674 HD domain Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 Gene3D G3DSA:3.50.50.60 3 320 3.2E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 443 2.5E-35 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 353 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 131 140 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 438 3.9E-77 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 Gene3D G3DSA:3.30.390.30 335 454 1.2E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 317 1.2E-72 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 SUPERFAMILY SSF55424 332 453 3.95E-41 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 Gene3D G3DSA:3.50.50.60 140 261 3.2E-114 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PIRSF PIRSF000350 1 448 4.7E-92 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 146 1.5E-42 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.5E-42 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.5E-42 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.5E-42 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.5E-42 T 14-10-2018 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 2 453 2.4E-163 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Tph_c17180 cacffeebfe4aea50f38dabc84a120779 460 SUPERFAMILY SSF51905 3 357 6.37E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c04200 747588c3ad445f611170bec541a8c849 171 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 115 133 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c04200 747588c3ad445f611170bec541a8c849 171 SUPERFAMILY SSF52833 11 158 4.7E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c04200 747588c3ad445f611170bec541a8c849 171 Gene3D G3DSA:1.10.10.1590 5 75 4.9E-11 T 14-10-2018 Tph_c04200 747588c3ad445f611170bec541a8c849 171 Gene3D G3DSA:3.40.30.10 76 168 3.3E-30 T 14-10-2018 Tph_c04200 747588c3ad445f611170bec541a8c849 171 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 15 157 7.8E-49 T 14-10-2018 Tph_c04200 747588c3ad445f611170bec541a8c849 171 PIRSF PIRSF000216 1 170 2.7E-50 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c11310 bf34e189377de86688afc8f03d171736 721 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 139 187 3.3E-13 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Tph_c11310 bf34e189377de86688afc8f03d171736 721 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 48 2.6E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Tph_c11310 bf34e189377de86688afc8f03d171736 721 ProSitePatterns PS01176 Initiation factor 2 signature. 665 687 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tph_c11310 bf34e189377de86688afc8f03d171736 721 Pfam PF00009 Elongation factor Tu GTP binding domain 219 375 8.8E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Tph_c11310 bf34e189377de86688afc8f03d171736 721 SUPERFAMILY SSF52540 208 386 4.04E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11310 bf34e189377de86688afc8f03d171736 721 Gene3D G3DSA:2.40.30.10 386 501 3.8E-44 T 14-10-2018 Tph_c11310 bf34e189377de86688afc8f03d171736 721 Gene3D G3DSA:3.40.50.300 211 385 1.3E-76 T 14-10-2018 Tph_c11310 bf34e189377de86688afc8f03d171736 721 Gene3D G3DSA:3.40.50.10050 508 615 2.2E-42 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Tph_c11310 bf34e189377de86688afc8f03d171736 721 Gene3D G3DSA:1.10.10.2480 1 68 4.9E-20 T 14-10-2018 Tph_c11310 bf34e189377de86688afc8f03d171736 721 SUPERFAMILY SSF50447 387 469 1.68E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c11310 bf34e189377de86688afc8f03d171736 721 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 712 17.83 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tph_c11310 bf34e189377de86688afc8f03d171736 721 Pfam PF11987 Translation-initiation factor 2 499 604 2.1E-41 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Tph_c11310 bf34e189377de86688afc8f03d171736 721 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 131 714 4.4E-266 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Tph_c11310 bf34e189377de86688afc8f03d171736 721 Gene3D G3DSA:2.40.30.10 616 713 8.8E-34 T 14-10-2018 Tph_c11310 bf34e189377de86688afc8f03d171736 721 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 373 4.3E-38 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c11310 bf34e189377de86688afc8f03d171736 721 SUPERFAMILY SSF50447 615 712 2.43E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c11310 bf34e189377de86688afc8f03d171736 721 SUPERFAMILY SSF52156 495 621 1.96E-40 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Tph_c05750 eb386e1768933b30f6a7890579edba56 138 Pfam PF14242 Domain of unknown function (DUF4342) 46 122 2.9E-15 T 14-10-2018 IPR025642 Domain of unknown function DUF4342 Tph_c05750 eb386e1768933b30f6a7890579edba56 138 SUPERFAMILY SSF46934 9 53 4.39E-8 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 Tph_c01220 6d1c44e17c7d84cd0ecea7e0c47923bf 171 Gene3D G3DSA:3.40.50.300 2 170 9.0E-27 T 14-10-2018 Tph_c01220 6d1c44e17c7d84cd0ecea7e0c47923bf 171 SUPERFAMILY SSF52540 2 164 2.05E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01220 6d1c44e17c7d84cd0ecea7e0c47923bf 171 Pfam PF03266 NTPase 3 164 2.0E-23 T 14-10-2018 IPR004948 Nucleoside-triphosphatase, THEP1 type GO:0098519 KEGG: 00230+3.6.1.15|KEGG: 00730+3.6.1.15|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 Gene3D G3DSA:3.65.10.10 13 419 2.3E-153 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 Gene3D G3DSA:3.65.10.10 21 230 2.3E-153 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 SUPERFAMILY SSF55205 4 428 6.0E-135 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 9 429 33.961 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 420 1.4E-124 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 PIRSF PIRSF000505 2 433 1.8E-125 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tph_c15720 d9cd9304ecbc9160a1cf20e1b7b6b211 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 13 428 3.3E-132 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Tph_c13800 00baf7a655ca168d69872eeee44e586c 252 SUPERFAMILY SSF161098 53 236 1.96E-29 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c13800 00baf7a655ca168d69872eeee44e586c 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 247 3.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c13800 00baf7a655ca168d69872eeee44e586c 252 Gene3D G3DSA:1.10.3720.10 45 247 1.9E-23 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 SUPERFAMILY SSF46785 2 91 7.14E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 2.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 44 2.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 2.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 2.4E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 Pfam PF01022 Bacterial regulatory protein, arsR family 19 64 1.8E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 35 53 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 SMART SM00418 12 90 2.3E-30 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c14530 95a107bcd4a20be7516c96f87040b5c5 95 Gene3D G3DSA:1.10.10.10 1 95 3.6E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c16280 0162de33c27d2c35ebccb8382c6d5dd6 295 Pfam PF00348 Polyprenyl synthetase 31 265 5.3E-61 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tph_c16280 0162de33c27d2c35ebccb8382c6d5dd6 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tph_c16280 0162de33c27d2c35ebccb8382c6d5dd6 295 SUPERFAMILY SSF48576 3 274 2.7E-87 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c16280 0162de33c27d2c35ebccb8382c6d5dd6 295 Gene3D G3DSA:1.10.600.10 1 295 4.1E-100 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c16280 0162de33c27d2c35ebccb8382c6d5dd6 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Tph_c16210 fe50a6658abd3e0a21579dfb41bf6fdd 453 Gene3D G3DSA:2.30.42.10 138 215 2.1E-9 T 14-10-2018 Tph_c16210 fe50a6658abd3e0a21579dfb41bf6fdd 453 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 83 420 2.6E-125 T 14-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B Tph_c16210 fe50a6658abd3e0a21579dfb41bf6fdd 453 SUPERFAMILY SSF50156 141 200 6.84E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c16210 fe50a6658abd3e0a21579dfb41bf6fdd 453 Pfam PF05580 SpoIVB peptidase S55 207 415 2.6E-78 T 14-10-2018 IPR008763 Peptidase S55, SpoIVB Tph_c28090 0581870ec26605cc5ed1f2d621446fe7 214 SUPERFAMILY SSF48452 88 192 6.72E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c28090 0581870ec26605cc5ed1f2d621446fe7 214 Gene3D G3DSA:1.25.40.10 51 200 2.9E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c28090 0581870ec26605cc5ed1f2d621446fe7 214 SMART SM00028 162 195 63.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c28090 0581870ec26605cc5ed1f2d621446fe7 214 SMART SM00028 88 121 20.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c28090 0581870ec26605cc5ed1f2d621446fe7 214 SMART SM00028 128 161 4.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c01100 b26c3aff69db0425bf597b3bbfe22866 134 SUPERFAMILY SSF88723 1 127 4.91E-22 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c01100 b26c3aff69db0425bf597b3bbfe22866 134 Pfam PF01850 PIN domain 4 127 1.9E-9 T 14-10-2018 IPR002716 PIN domain Tph_c01100 b26c3aff69db0425bf597b3bbfe22866 134 Gene3D G3DSA:3.40.50.1010 3 133 6.5E-28 T 14-10-2018 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 SMART SM00342 334 417 7.9E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 Pfam PF10114 Sensory domain found in PocR 4 167 3.4E-47 T 14-10-2018 IPR018771 PocR domain Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 Gene3D G3DSA:1.10.10.60 368 420 1.3E-18 T 14-10-2018 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 Pfam PF12833 Helix-turn-helix domain 345 418 5.6E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 371 413 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 SUPERFAMILY SSF46689 318 368 4.3E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 SUPERFAMILY SSF46689 370 420 1.3E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 401 417 7.1E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 386 401 7.1E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Tph_c20140 8ac13ff0f5f199141b193daecff44813 423 Gene3D G3DSA:1.10.10.60 315 367 1.7E-16 T 14-10-2018 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 154 5.5E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 3.0E-26 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 44 59 3.0E-26 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 3.0E-26 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 3.0E-26 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 3.0E-26 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 3.0E-26 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 Gene3D G3DSA:3.50.50.60 120 223 3.7E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 SUPERFAMILY SSF51905 10 289 5.1E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 Gene3D G3DSA:3.50.50.60 10 283 3.7E-69 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 8.5E-17 T 14-10-2018 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 8.5E-17 T 14-10-2018 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 263 8.5E-17 T 14-10-2018 Tph_c20510 18465e9d7fbbc2a6b77114ed10a5e39e 295 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 205 276 3.9E-8 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 SMART SM00357 2 65 1.8E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 PIRSF PIRSF002599 1 65 2.8E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 Gene3D G3DSA:2.40.50.140 1 63 1.3E-29 T 14-10-2018 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 SUPERFAMILY SSF50249 2 64 8.06E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 Pfam PF00313 'Cold-shock' DNA-binding domain 2 64 1.6E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 14-10-2018 IPR019844 Cold-shock conserved site Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 PRINTS PR00050 Cold shock protein signature 23 32 4.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 PRINTS PR00050 Cold shock protein signature 38 56 4.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c24870 6d7ff810fef8eeaad1824fa365d87340 65 PRINTS PR00050 Cold shock protein signature 3 18 4.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Gene3D G3DSA:1.10.730.10 336 521 1.4E-47 T 14-10-2018 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 SUPERFAMILY SSF50249 553 653 5.88E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Gene3D G3DSA:2.40.50.140 544 654 1.5E-35 T 14-10-2018 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 502 50.095 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Gene3D G3DSA:2.170.220.10 117 225 6.0E-152 T 14-10-2018 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 526 654 1.1E-45 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 SUPERFAMILY SSF52374 3 346 3.49E-124 T 14-10-2018 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Pfam PF01588 Putative tRNA binding domain 560 651 1.1E-28 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 SUPERFAMILY SSF47323 349 567 2.24E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Pfam PF09334 tRNA synthetases class I (M) 155 360 3.0E-68 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Pfam PF09334 tRNA synthetases class I (M) 6 149 2.0E-51 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Gene3D G3DSA:3.40.50.620 6 332 6.0E-152 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 347 358 1.3E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 270 1.3E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.3E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 223 234 1.3E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.3E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.3E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 479 1.2E-170 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Tph_c28730 1c6ed1c5181ea30c4e3b3454e847e2d2 654 Pfam PF08264 Anticodon-binding domain of tRNA 388 486 1.2E-5 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 SUPERFAMILY SSF46689 7 66 5.99E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 Gene3D G3DSA:1.10.10.60 4 49 6.0E-19 T 14-10-2018 Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 SUPERFAMILY SSF48498 90 202 1.19E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 Gene3D G3DSA:1.10.357.10 53 204 1.4E-14 T 14-10-2018 Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 8.2E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c18810 1c81d3a8926d65ff7941811be4377e93 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c12270 dc59a87315b56ca25e1081736fedca99 469 Gene3D G3DSA:3.40.50.300 216 451 5.9E-64 T 14-10-2018 Tph_c12270 dc59a87315b56ca25e1081736fedca99 469 SUPERFAMILY SSF52540 224 446 8.61E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12270 dc59a87315b56ca25e1081736fedca99 469 ProSitePatterns PS00211 ABC transporters family signature. 357 371 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c12270 dc59a87315b56ca25e1081736fedca99 469 SMART SM00382 250 441 9.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c12270 dc59a87315b56ca25e1081736fedca99 469 Pfam PF00005 ABC transporter 242 385 3.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c12710 3517314577e8da0508b8b09ee44e556e 303 Pfam PF03419 Sporulation factor SpoIIGA 6 297 2.3E-88 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Tph_c12710 3517314577e8da0508b8b09ee44e556e 303 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 6 297 8.3E-73 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Tph_c12710 3517314577e8da0508b8b09ee44e556e 303 PIRSF PIRSF018571 5 300 3.9E-91 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 SUPERFAMILY SSF53067 144 326 1.95E-50 T 14-10-2018 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.1E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 181 201 1.1E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.1E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 126 145 1.1E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 1.1E-63 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 Gene3D G3DSA:3.30.420.40 148 311 1.7E-131 T 14-10-2018 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 Gene3D G3DSA:3.90.640.10 180 253 1.7E-131 T 14-10-2018 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 Gene3D G3DSA:3.30.420.40 7 321 1.7E-131 T 14-10-2018 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 3 330 3.0E-154 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 SUPERFAMILY SSF53067 4 142 1.43E-41 T 14-10-2018 Tph_c05970 aa3bb7716df0288f032f7b321eadb00d 339 Pfam PF06723 MreB/Mbl protein 5 330 2.9E-149 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Tph_c11870 afbe8b6fd7c8ac3d001467a818691af6 131 Pfam PF14104 Domain of unknown function (DUF4277) 19 116 7.8E-16 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c10320 8625cb7a075d4315619494db4f07bd99 91 SUPERFAMILY SSF160544 7 84 1.96E-22 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tph_c10320 8625cb7a075d4315619494db4f07bd99 91 Gene3D G3DSA:3.40.1690.10 5 86 1.6E-24 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Tph_c10320 8625cb7a075d4315619494db4f07bd99 91 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 80 2.4E-19 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Tph_c26060 f1c581fd0d71a7130a6a9e78ed679a2c 174 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 25 166 4.0E-5 T 14-10-2018 Tph_c26060 f1c581fd0d71a7130a6a9e78ed679a2c 174 Pfam PF00466 Ribosomal protein L10 5 98 3.2E-28 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Tph_c26060 f1c581fd0d71a7130a6a9e78ed679a2c 174 ProSitePatterns PS01109 Ribosomal protein L10 signature. 7 41 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c26060 f1c581fd0d71a7130a6a9e78ed679a2c 174 Gene3D G3DSA:3.30.70.1730 4 132 5.6E-42 T 14-10-2018 Tph_c26060 f1c581fd0d71a7130a6a9e78ed679a2c 174 SUPERFAMILY SSF160369 4 171 8.24E-56 T 14-10-2018 Tph_c26060 f1c581fd0d71a7130a6a9e78ed679a2c 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 2 160 26.163 T 14-10-2018 IPR022973 Ribosomal protein L10 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 Gene3D G3DSA:3.90.1530.10 1 94 1.5E-7 T 14-10-2018 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 349 367 1.5E-12 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 330 347 1.5E-12 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 190 204 1.5E-12 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 372 392 1.5E-12 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 Pfam PF01555 DNA methylase 193 388 4.3E-18 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 SUPERFAMILY SSF110849 1 100 2.62E-18 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 SUPERFAMILY SSF53335 159 395 1.6E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 194 200 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 PIRSF PIRSF036758 1 409 8.6E-140 T 14-10-2018 IPR015840 DNA methyase, ParB domain-containing Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 SMART SM00470 4 93 5.3E-13 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 Pfam PF02195 ParB-like nuclease domain 5 92 2.1E-13 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c23250 218da90acffc750f3a6fbf130cbe1ac2 417 Gene3D G3DSA:3.40.50.150 169 392 3.8E-41 T 14-10-2018 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Pfam PF03793 PASTA domain 411 465 5.2E-9 T 14-10-2018 IPR005543 PASTA domain Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Pfam PF03793 PASTA domain 345 405 1.3E-8 T 14-10-2018 IPR005543 PASTA domain Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Pfam PF00069 Protein kinase domain 23 270 3.0E-58 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Gene3D G3DSA:1.10.510.10 104 294 7.5E-52 T 14-10-2018 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Gene3D G3DSA:3.30.10.20 407 467 7.7E-7 T 14-10-2018 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 SUPERFAMILY SSF56112 15 316 4.18E-82 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 SMART SM00740 341 406 0.78 T 14-10-2018 IPR005543 PASTA domain Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 SMART SM00740 407 467 4.9E-4 T 14-10-2018 IPR005543 PASTA domain Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 SMART SM00220 23 284 4.8E-75 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Gene3D G3DSA:3.30.10.20 343 405 2.8E-9 T 14-10-2018 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 Gene3D G3DSA:3.30.200.20 11 102 6.2E-30 T 14-10-2018 Tph_c25410 f64d32ca1e4810baacad4abc14e548ff 537 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 142 154 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Tph_c14260 6cde4f853993bfdaff3cd845c36d2792 258 Gene3D G3DSA:2.60.200.20 141 257 1.7E-27 T 14-10-2018 Tph_c14260 6cde4f853993bfdaff3cd845c36d2792 258 SMART SM00240 185 235 6.9E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Tph_c14260 6cde4f853993bfdaff3cd845c36d2792 258 Pfam PF12401 Protein of unknown function (DUF2662) 3 114 1.3E-32 T 14-10-2018 IPR022128 Domain of unknown function DUF3662 Tph_c14260 6cde4f853993bfdaff3cd845c36d2792 258 SUPERFAMILY SSF49879 160 254 2.1E-25 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Tph_c14260 6cde4f853993bfdaff3cd845c36d2792 258 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 168 256 1.5E-18 T 14-10-2018 IPR032030 YscD, cytoplasmic domain Tph_c14260 6cde4f853993bfdaff3cd845c36d2792 258 Gene3D G3DSA:3.30.2320.60 2 124 7.4E-21 T 14-10-2018 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 TIGRFAM TIGR01696 deoB: phosphopentomutase 12 384 3.8E-137 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 SUPERFAMILY SSF53649 11 383 2.29E-64 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 Hamap MF_00740 Phosphopentomutase [deoB]. 10 395 47.399 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 Pfam PF01676 Metalloenzyme superfamily 12 383 7.3E-29 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 Gene3D G3DSA:3.30.70.1250 105 222 1.5E-150 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 PIRSF PIRSF001491 9 394 1.5E-136 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 Gene3D G3DSA:3.40.720.10 12 384 1.5E-150 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Tph_c16070 3ccebecb5aaf4dd5448cb6b12a0aa11d 399 SUPERFAMILY SSF143856 107 222 3.66E-46 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 Tph_c13580 9ef2bc6b63531de409f1f63a01ceaac8 289 SUPERFAMILY SSF56821 2 289 1.13E-68 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Tph_c13580 9ef2bc6b63531de409f1f63a01ceaac8 289 Gene3D G3DSA:3.40.50.2030 1 67 4.5E-6 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c13580 9ef2bc6b63531de409f1f63a01ceaac8 289 Pfam PF03063 Prismane/CO dehydrogenase family 2 270 4.2E-58 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c13580 9ef2bc6b63531de409f1f63a01ceaac8 289 Gene3D G3DSA:3.40.50.2030 80 289 3.7E-69 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c11680 380d75fd0b3e642cd843ac3ff8f493c3 252 Gene3D G3DSA:2.20.25.110 147 208 3.0E-58 T 14-10-2018 Tph_c11680 380d75fd0b3e642cd843ac3ff8f493c3 252 Gene3D G3DSA:3.40.50.150 11 247 3.0E-58 T 14-10-2018 Tph_c11680 380d75fd0b3e642cd843ac3ff8f493c3 252 SUPERFAMILY SSF53335 7 249 1.94E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c11680 380d75fd0b3e642cd843ac3ff8f493c3 252 Pfam PF13649 Methyltransferase domain 44 139 2.4E-20 T 14-10-2018 Tph_c01520 66b8a93156288ca4c26363ccbeb12377 263 Pfam PF13478 XdhC Rossmann domain 98 240 5.0E-36 T 14-10-2018 IPR027051 XdhC Rossmann domain Tph_c01520 66b8a93156288ca4c26363ccbeb12377 263 Gene3D G3DSA:3.40.50.720 97 246 4.3E-43 T 14-10-2018 Tph_c01520 66b8a93156288ca4c26363ccbeb12377 263 Pfam PF02625 XdhC and CoxI family 14 74 1.3E-11 T 14-10-2018 IPR003777 XdhC- CoxI Tph_c03630 31c27afb614992c744116667a01e2ac1 440 SMART SM00342 349 432 1.3E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 401 416 9.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 416 432 9.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 Gene3D G3DSA:1.10.10.60 329 382 6.2E-17 T 14-10-2018 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 386 428 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 Pfam PF12833 Helix-turn-helix domain 355 434 1.7E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 Pfam PF10114 Sensory domain found in PocR 19 181 4.3E-47 T 14-10-2018 IPR018771 PocR domain Tph_c03630 31c27afb614992c744116667a01e2ac1 440 SUPERFAMILY SSF46689 331 383 4.93E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 Gene3D G3DSA:1.10.10.60 383 435 2.5E-21 T 14-10-2018 Tph_c03630 31c27afb614992c744116667a01e2ac1 440 SUPERFAMILY SSF46689 385 435 4.3E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c09970 41833cd65999b8639652df264463b6d9 548 Gene3D G3DSA:1.25.40.340 6 198 2.8E-11 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Tph_c09970 41833cd65999b8639652df264463b6d9 548 SMART SM01120 36 201 3.5E-57 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Tph_c09970 41833cd65999b8639652df264463b6d9 548 SMART SM01121 236 548 1.3E-136 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain Tph_c09970 41833cd65999b8639652df264463b6d9 548 SUPERFAMILY SSF101473 6 202 6.15E-41 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Tph_c09970 41833cd65999b8639652df264463b6d9 548 Pfam PF02734 DAK2 domain 36 198 2.8E-40 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Tph_c09970 41833cd65999b8639652df264463b6d9 548 Pfam PF13684 Dihydroxyacetone kinase family 237 548 4.4E-104 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain Tph_c09970 41833cd65999b8639652df264463b6d9 548 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 13 548 1.1E-179 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV Tph_c08360 a3a5b5ac6da0b08b5e822141ef0acdaa 165 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 64 77 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Tph_c08360 a3a5b5ac6da0b08b5e822141ef0acdaa 165 SMART SM00852 4 148 3.8E-32 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08360 a3a5b5ac6da0b08b5e822141ef0acdaa 165 SUPERFAMILY SSF53218 1 153 5.5E-49 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c08360 a3a5b5ac6da0b08b5e822141ef0acdaa 165 Pfam PF00994 Probable molybdopterin binding domain 4 147 6.9E-39 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08360 a3a5b5ac6da0b08b5e822141ef0acdaa 165 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 142 1.9E-38 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c08360 a3a5b5ac6da0b08b5e822141ef0acdaa 165 Gene3D G3DSA:3.40.980.10 1 164 8.9E-61 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 5 345 47.586 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 Gene3D G3DSA:3.90.650.10 170 348 5.0E-69 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 338 3.6E-136 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 163 1.6E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 344 4.8E-31 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 SUPERFAMILY SSF55326 5 168 1.34E-51 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 SUPERFAMILY SSF56042 170 343 9.87E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c08480 cc0bcf34f7617c6af62339fb9446a926 350 Gene3D G3DSA:3.30.1330.10 4 169 1.8E-68 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c15910 5cd43389dce8fddf5ca6c1b721996638 236 Pfam PF02616 Segregation and condensation protein ScpA 20 232 2.8E-17 T 14-10-2018 IPR003768 Segregation and condensation protein A Tph_c22740 1dd9b1c4970f00d850330e64ef9f23c4 322 Pfam PF02562 PhoH-like protein 112 315 1.8E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Tph_c22740 1dd9b1c4970f00d850330e64ef9f23c4 322 Gene3D G3DSA:3.40.50.300 109 315 3.9E-74 T 14-10-2018 Tph_c22740 1dd9b1c4970f00d850330e64ef9f23c4 322 SUPERFAMILY SSF52540 75 290 7.0E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 253 1.2E-41 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 Pfam PF04545 Sigma-70, region 4 202 251 2.3E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 Gene3D G3DSA:1.20.120.1810 8 106 6.8E-29 T 14-10-2018 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 PRINTS PR00046 Major sigma-70 factor signature 223 238 9.0E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 PRINTS PR00046 Major sigma-70 factor signature 206 218 9.0E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 PRINTS PR00046 Major sigma-70 factor signature 238 249 9.0E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 PRINTS PR00046 Major sigma-70 factor signature 86 94 9.0E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 PRINTS PR00046 Major sigma-70 factor signature 62 75 9.0E-14 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 SUPERFAMILY SSF88946 11 105 1.01E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 PIRSF PIRSF000770 13 254 1.0E-35 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 62 75 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 Pfam PF04539 Sigma-70 region 3 116 176 2.5E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 33 253 1.9E-83 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 SUPERFAMILY SSF88659 179 253 1.12E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 Pfam PF04542 Sigma-70 region 2 38 104 2.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 SUPERFAMILY SSF88659 112 181 6.98E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c16020 21675d61a204e842482bdbec7d5b8fc7 254 Gene3D G3DSA:1.20.140.160 109 254 1.4E-31 T 14-10-2018 Tph_c08400 de07dba479a3afdce92504c6b1ed8dfb 187 SUPERFAMILY SSF53271 4 173 4.85E-59 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c08400 de07dba479a3afdce92504c6b1ed8dfb 187 Pfam PF00156 Phosphoribosyl transferase domain 12 156 3.0E-32 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tph_c08400 de07dba479a3afdce92504c6b1ed8dfb 187 Gene3D G3DSA:3.40.50.2020 1 181 7.9E-72 T 14-10-2018 Tph_c08400 de07dba479a3afdce92504c6b1ed8dfb 187 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 6 170 1.1E-68 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Tph_c26270 56155cb181c0e65c24dbc74f776d293d 188 Gene3D G3DSA:3.30.70.20 39 181 9.8E-27 T 14-10-2018 Tph_c26270 56155cb181c0e65c24dbc74f776d293d 188 SUPERFAMILY SSF54862 1 173 7.43E-40 T 14-10-2018 Tph_c26270 56155cb181c0e65c24dbc74f776d293d 188 Pfam PF12838 4Fe-4S dicluster domain 83 152 1.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c26270 56155cb181c0e65c24dbc74f776d293d 188 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 83 94 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 Pfam PF00534 Glycosyl transferases group 1 290 447 2.0E-16 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 Gene3D G3DSA:3.40.50.2000 251 459 1.6E-190 T 14-10-2018 Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 474 5.5E-180 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 Gene3D G3DSA:3.40.50.2000 8 473 1.6E-190 T 14-10-2018 Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 Pfam PF08323 Starch synthase catalytic domain 7 238 8.1E-85 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 SUPERFAMILY SSF53756 5 478 4.19E-127 T 14-10-2018 Tph_c11790 5cd727d4d9a78ebd10dd9d85729cf00b 488 Hamap MF_00484 Glycogen synthase [glgA]. 6 475 45.467 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 225 623 2.2E-122 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 8 206 6.2E-75 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 Gene3D G3DSA:1.10.599.10 240 623 1.1E-130 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 SUPERFAMILY SSF56228 3 210 3.53E-71 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 SMART SM00790 5 208 3.9E-102 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 SUPERFAMILY SSF48310 214 626 4.05E-106 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 Gene3D G3DSA:3.60.9.10 3 212 4.1E-82 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c27630 d5f531314832fdbfb816bb67b7d6abae 629 Gene3D G3DSA:1.10.569.10 242 432 1.1E-130 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tph_c29140 4abcfcb7eb03da25b6d8620d0df73074 250 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 11 247 8.5E-52 T 14-10-2018 IPR005226 UPF0014 family Tph_c29140 4abcfcb7eb03da25b6d8620d0df73074 250 Pfam PF03649 Uncharacterised protein family (UPF0014) 12 242 2.0E-80 T 14-10-2018 IPR005226 UPF0014 family Tph_c27590 dc261adf1eff7a92dfda4a9228575afc 436 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 267 418 2.1E-28 T 14-10-2018 IPR006512 YidE/YbjL duplication Tph_c27590 dc261adf1eff7a92dfda4a9228575afc 436 Pfam PF06826 Predicted Permease Membrane Region 66 220 1.7E-27 T 14-10-2018 IPR006512 YidE/YbjL duplication Tph_c27590 dc261adf1eff7a92dfda4a9228575afc 436 Pfam PF06826 Predicted Permease Membrane Region 262 432 3.3E-37 T 14-10-2018 IPR006512 YidE/YbjL duplication Tph_c08570 3e318847e7e2b3e7740a57a1340205db 152 Pfam PF13247 4Fe-4S dicluster domain 58 147 5.6E-14 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08570 3e318847e7e2b3e7740a57a1340205db 152 SUPERFAMILY SSF54862 4 146 6.95E-33 T 14-10-2018 Tph_c08570 3e318847e7e2b3e7740a57a1340205db 152 Gene3D G3DSA:3.30.70.20 8 148 6.2E-25 T 14-10-2018 Tph_c08570 3e318847e7e2b3e7740a57a1340205db 152 Gene3D G3DSA:3.30.70.20 68 122 6.2E-25 T 14-10-2018 Tph_c08570 3e318847e7e2b3e7740a57a1340205db 152 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 95 106 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c03190 1bbaf75a5199e47e86fe9cd1dd84326f 155 SUPERFAMILY SSF88723 4 112 1.31E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c03190 1bbaf75a5199e47e86fe9cd1dd84326f 155 Pfam PF01850 PIN domain 3 114 4.0E-16 T 14-10-2018 IPR002716 PIN domain Tph_c03190 1bbaf75a5199e47e86fe9cd1dd84326f 155 Gene3D G3DSA:3.40.50.1010 2 118 1.0E-11 T 14-10-2018 Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 Gene3D G3DSA:1.10.10.10 87 179 6.2E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 PIRSF PIRSF019345 2 179 1.6E-59 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 Pfam PF04079 Segregation and condensation complex subunit ScpB 12 171 2.1E-58 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 SUPERFAMILY SSF46785 7 83 1.39E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 11 175 6.2E-43 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 SUPERFAMILY SSF46785 88 162 1.07E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c15900 3bd47045e4a78baf025de3c241fd2e74 179 Gene3D G3DSA:1.10.10.10 5 86 2.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 SUPERFAMILY SSF54862 3 60 8.38E-15 T 14-10-2018 Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 PRINTS PR00352 3Fe-4S ferredoxin signature 47 59 3.2E-9 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 3.2E-9 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 3.2E-9 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 5 60 5.8E-18 T 14-10-2018 Tph_c08140 1d654cd626168569cf0d624fafc305d5 63 Gene3D G3DSA:3.30.70.20 1 62 2.3E-22 T 14-10-2018 Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 SUPERFAMILY SSF54211 9 170 8.72E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 SUPERFAMILY SSF52540 196 508 1.92E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 143 3.7E-44 T 14-10-2018 Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 Gene3D G3DSA:3.40.50.300 197 508 3.7E-61 T 14-10-2018 Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 Pfam PF01078 Magnesium chelatase, subunit ChlI 196 402 2.7E-95 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 Gene3D G3DSA:3.30.230.10 38 169 1.5E-7 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 505 1.1E-192 T 14-10-2018 IPR004482 Mg chelatase-related protein Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 215 230 9.1E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 296 310 9.1E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 324 337 9.1E-5 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 410 505 1.0E-31 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain Tph_c10400 d60a78e68b9777e1e5e0895d04d2e5c0 512 SMART SM00382 216 399 5.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 7.4E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 7.4E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 Pfam PF08334 Type II secretion system (T2SS), protein G 40 83 3.9E-6 T 14-10-2018 IPR013545 Type II secretion system protein G Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 3.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 35 1.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 Gene3D G3DSA:3.30.700.10 16 138 1.1E-19 T 14-10-2018 Tph_c16620 6531e3d994d070dfefeda6bf7e7ed2a1 143 SUPERFAMILY SSF54523 16 113 8.63E-20 T 14-10-2018 Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 SMART SM00470 28 118 3.8E-33 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 SUPERFAMILY SSF109709 111 219 1.49E-34 T 14-10-2018 Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 25 203 7.7E-58 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 Pfam PF02195 ParB-like nuclease domain 29 118 2.3E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 SUPERFAMILY SSF110849 24 122 1.05E-29 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 Gene3D G3DSA:3.90.1530.30 41 104 3.4E-27 T 14-10-2018 Tph_c00340 e0050e5aba89f88a3f7b4edca027a5f8 285 Gene3D G3DSA:1.10.10.2830 105 219 4.2E-39 T 14-10-2018 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 SUPERFAMILY SSF54862 568 624 4.03E-16 T 14-10-2018 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 574 585 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 466 550 1.0E-34 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Gene3D G3DSA:1.20.1440.230 463 556 1.1E-35 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 SUPERFAMILY SSF142984 378 460 4.58E-24 T 14-10-2018 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Pfam PF00037 4Fe-4S binding domain 568 589 1.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Pfam PF00037 4Fe-4S binding domain 599 620 7.9E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Gene3D G3DSA:3.40.30.10 21 110 2.5E-10 T 14-10-2018 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 478 489 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Gene3D G3DSA:3.40.50.11540 190 368 3.7E-80 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Gene3D G3DSA:3.30.70.20 590 628 8.0E-6 T 14-10-2018 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 SMART SM00928 465 510 3.1E-24 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Gene3D G3DSA:3.10.20.600 369 462 7.0E-31 T 14-10-2018 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 186 356 6.3E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Pfam PF10531 SLBB domain 380 427 1.7E-6 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 SUPERFAMILY SSF52833 19 107 5.37E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 SUPERFAMILY SSF142019 137 377 3.01E-91 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 SUPERFAMILY SSF140490 463 562 8.89E-40 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08250 159e82aaeed7e36fa43aab95fa2c677a 630 Gene3D G3DSA:3.30.70.20 557 589 1.8E-5 T 14-10-2018 Tph_c02450 4760d80294c55036711be27890365647 263 SUPERFAMILY SSF53335 22 100 1.95E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c02450 4760d80294c55036711be27890365647 263 SUPERFAMILY SSF53335 110 262 1.79E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c02450 4760d80294c55036711be27890365647 263 Gene3D G3DSA:3.40.50.150 110 263 1.3E-24 T 14-10-2018 Tph_c02450 4760d80294c55036711be27890365647 263 Gene3D G3DSA:3.40.50.150 3 105 2.5E-20 T 14-10-2018 Tph_c02450 4760d80294c55036711be27890365647 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 37 54 6.0E-14 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c02450 4760d80294c55036711be27890365647 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 57 75 6.0E-14 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c02450 4760d80294c55036711be27890365647 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 80 100 6.0E-14 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c02450 4760d80294c55036711be27890365647 263 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 133 138 - T 14-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 Tph_c02450 4760d80294c55036711be27890365647 263 Pfam PF01555 DNA methylase 129 262 1.6E-8 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c02450 4760d80294c55036711be27890365647 263 Pfam PF01555 DNA methylase 22 95 7.7E-13 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c24050 7b179f483aa4a802d3ec94a49767aefe 184 Gene3D G3DSA:1.10.1130.10 62 177 5.1E-19 T 14-10-2018 Tph_c24050 7b179f483aa4a802d3ec94a49767aefe 184 SUPERFAMILY SSF48695 34 164 4.81E-15 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily Tph_c24050 7b179f483aa4a802d3ec94a49767aefe 184 Pfam PF14537 Cytochrome c3 71 164 1.4E-14 T 14-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 SUPERFAMILY SSF57802 291 325 5.89E-5 T 14-10-2018 Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 SUPERFAMILY SSF54862 9 317 2.18E-17 T 14-10-2018 Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 Gene3D G3DSA:1.20.1260.10 162 292 6.1E-45 T 14-10-2018 IPR012347 Ferritin-like Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 Pfam PF00037 4Fe-4S binding domain 34 56 1.1E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 SUPERFAMILY SSF47240 163 290 1.55E-35 T 14-10-2018 IPR009078 Ferritin-like superfamily Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 Gene3D G3DSA:2.20.28.10 293 326 3.4E-6 T 14-10-2018 Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 Gene3D G3DSA:3.30.70.20 9 92 4.5E-12 T 14-10-2018 Tph_c23380 1c4d84c6a1792c9b5773708071dff44d 326 Pfam PF02915 Rubrerythrin 170 284 4.9E-20 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tph_c02780 0d29f2897287e05e93e22ea8fd16a865 380 Gene3D G3DSA:3.40.50.2000 26 367 1.3E-78 T 14-10-2018 Tph_c02780 0d29f2897287e05e93e22ea8fd16a865 380 SUPERFAMILY SSF53756 12 373 2.38E-92 T 14-10-2018 Tph_c02780 0d29f2897287e05e93e22ea8fd16a865 380 Pfam PF00534 Glycosyl transferases group 1 183 348 2.1E-40 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c02780 0d29f2897287e05e93e22ea8fd16a865 380 Pfam PF13439 Glycosyltransferase Family 4 16 173 1.0E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c02780 0d29f2897287e05e93e22ea8fd16a865 380 Gene3D G3DSA:3.40.50.2000 169 354 1.3E-78 T 14-10-2018 Tph_c00910 aef8efe83a84efc2e67ebc2b5a696ea6 75 Gene3D G3DSA:3.30.160.250 4 73 1.0E-19 T 14-10-2018 Tph_c00910 aef8efe83a84efc2e67ebc2b5a696ea6 75 SUPERFAMILY SSF143100 3 61 1.31E-17 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like Tph_c00910 aef8efe83a84efc2e67ebc2b5a696ea6 75 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 5 62 3.9E-11 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Tph_c14790 a10f2b717f6193476db09317c7702645 698 SUPERFAMILY SSF52540 298 511 1.28E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 52 66 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 110 2.6E-22 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 Gene3D G3DSA:3.30.230.10 1 114 1.2E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 SUPERFAMILY SSF54211 2 112 2.78E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 107 4.0E-10 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 Pfam PF00825 Ribonuclease P 2 107 1.5E-29 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tph_c00260 b2d956c42b35dd19b433c24ab4600276 115 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 2 112 17.994 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Tph_c02440 528717bc39857c096fdc2dab3ca2a82d 79 Gene3D G3DSA:3.30.70.20 1 78 1.1E-12 T 14-10-2018 Tph_c02440 528717bc39857c096fdc2dab3ca2a82d 79 SUPERFAMILY SSF54862 4 71 9.77E-15 T 14-10-2018 Tph_c02440 528717bc39857c096fdc2dab3ca2a82d 79 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 55 66 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c02440 528717bc39857c096fdc2dab3ca2a82d 79 Pfam PF14697 4Fe-4S dicluster domain 14 70 1.8E-10 T 14-10-2018 Tph_c16910 dee22249012572cf3052d4b0118a54c6 142 Pfam PF03652 Holliday junction resolvase 1 133 2.1E-44 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tph_c16910 dee22249012572cf3052d4b0118a54c6 142 SUPERFAMILY SSF53098 1 134 1.26E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c16910 dee22249012572cf3052d4b0118a54c6 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 136 25.081 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tph_c16910 dee22249012572cf3052d4b0118a54c6 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 133 6.4E-39 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Tph_c16910 dee22249012572cf3052d4b0118a54c6 142 Gene3D G3DSA:3.30.420.140 1 140 1.1E-47 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Tph_c16910 dee22249012572cf3052d4b0118a54c6 142 SMART SM00732 1 101 2.1E-33 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Tph_c24000 e45794f406a8bee747fcff538f9c29a9 220 Pfam PF03737 Aldolase/RraA 16 173 8.4E-40 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Tph_c24000 e45794f406a8bee747fcff538f9c29a9 220 Gene3D G3DSA:3.50.30.100 2 196 2.7E-61 T 14-10-2018 Tph_c24000 e45794f406a8bee747fcff538f9c29a9 220 SUPERFAMILY SSF89562 13 184 9.55E-44 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Tph_c25350 a4694463508223bf6174f7bab04d016e 131 Gene3D G3DSA:2.30.110.10 1 131 1.8E-42 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tph_c25350 a4694463508223bf6174f7bab04d016e 131 SUPERFAMILY SSF50475 1 124 3.75E-25 T 14-10-2018 Tph_c25350 a4694463508223bf6174f7bab04d016e 131 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 81 1.4E-12 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Tph_c14190 c2a0ec38d6040f1c89fbe839362285a5 107 Pfam PF01527 Transposase 3 83 1.5E-13 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c14190 c2a0ec38d6040f1c89fbe839362285a5 107 SUPERFAMILY SSF46689 2 97 3.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 Gene3D G3DSA:1.20.58.410 1 60 8.6E-7 T 14-10-2018 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 191 207 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 Pfam PF03462 PCRF domain 3 166 1.5E-52 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 309 1.2E-143 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 Pfam PF00472 RF-1 domain 176 284 1.4E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 Gene3D G3DSA:3.30.70.1660 75 305 1.3E-96 T 14-10-2018 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 SMART SM00937 30 141 4.5E-53 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 312 33.951 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 Gene3D G3DSA:3.30.160.20 172 267 1.3E-96 T 14-10-2018 Tph_c06490 3a0141ad711b33afba1bdc64b7ca5de6 314 SUPERFAMILY SSF75620 2 311 3.14E-124 T 14-10-2018 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 SUPERFAMILY SSF50486 213 319 9.73E-32 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 Pfam PF00551 Formyl transferase 11 188 3.3E-37 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 Gene3D G3DSA:3.40.50.170 6 213 1.9E-70 T 14-10-2018 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 10 312 1.1E-92 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 SUPERFAMILY SSF53328 10 213 7.06E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 10 314 34.787 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 Gene3D G3DSA:3.10.25.10 215 320 1.3E-34 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tph_c14280 446d59672ec1c06eae49eb1a6a9e9af9 320 Pfam PF02911 Formyl transferase, C-terminal domain 213 312 8.7E-30 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tph_c00430 c8bc46b207331f0445df61f01237deb2 480 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 7 454 1.8E-174 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tph_c00430 c8bc46b207331f0445df61f01237deb2 480 Pfam PF03841 L-seryl-tRNA selenium transferase 77 441 2.6E-150 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tph_c00430 c8bc46b207331f0445df61f01237deb2 480 Gene3D G3DSA:3.90.1150.110 9 444 2.2E-166 T 14-10-2018 Tph_c00430 c8bc46b207331f0445df61f01237deb2 480 Gene3D G3DSA:3.40.640.10 89 352 2.2E-166 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c00430 c8bc46b207331f0445df61f01237deb2 480 SUPERFAMILY SSF53383 71 457 5.72E-48 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c00430 c8bc46b207331f0445df61f01237deb2 480 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 459 209.118 T 14-10-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 Tph_c16460 9479671d59f884a63bb2bdd8963c0e32 330 SUPERFAMILY SSF52540 81 285 7.94E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16460 9479671d59f884a63bb2bdd8963c0e32 330 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 36 317 2.7E-109 T 14-10-2018 IPR014217 Sporulation stage III, protein AA Tph_c16460 9479671d59f884a63bb2bdd8963c0e32 330 Gene3D G3DSA:3.40.50.300 150 302 7.7E-18 T 14-10-2018 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 140 2.4E-33 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 4 141 1.8E-41 T 14-10-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 PRINTS PR00446 Hydrogen uptake protein signature 15 26 2.4E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 PRINTS PR00446 Hydrogen uptake protein signature 56 66 2.4E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 PRINTS PR00446 Hydrogen uptake protein signature 3 15 2.4E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 PRINTS PR00446 Hydrogen uptake protein signature 67 83 2.4E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 PRINTS PR00446 Hydrogen uptake protein signature 33 50 2.4E-11 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 Gene3D G3DSA:3.40.50.1450 1 149 7.6E-49 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 SUPERFAMILY SSF53163 2 140 1.44E-32 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c26370 adf9a5234a66c04c9ab13aa99f824cc0 149 Pfam PF01750 Hydrogenase maturation protease 25 138 5.7E-20 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c07920 3b3ad71fb84cf203e40ad8aff090a551 105 Pfam PF01527 Transposase 3 83 9.6E-13 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c07920 3b3ad71fb84cf203e40ad8aff090a551 105 SUPERFAMILY SSF46689 2 97 2.15E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c23310 3b3ad71fb84cf203e40ad8aff090a551 105 Pfam PF01527 Transposase 3 83 9.6E-13 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c23310 3b3ad71fb84cf203e40ad8aff090a551 105 SUPERFAMILY SSF46689 2 97 2.15E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c13470 73dbb9c007677b052a793811f8e5e77d 250 Gene3D G3DSA:3.40.50.1220 16 244 1.8E-66 T 14-10-2018 Tph_c13470 73dbb9c007677b052a793811f8e5e77d 250 Gene3D G3DSA:3.30.1600.10 34 172 1.8E-66 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily Tph_c13470 73dbb9c007677b052a793811f8e5e77d 250 SUPERFAMILY SSF52467 4 248 1.99E-74 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tph_c13470 73dbb9c007677b052a793811f8e5e77d 250 Pfam PF02146 Sir2 family 25 200 2.1E-46 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 Tph_c04880 cf8ad045968b45726b4ee4b15777f592 296 Gene3D G3DSA:1.10.3720.10 59 291 3.6E-34 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c04880 cf8ad045968b45726b4ee4b15777f592 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 285 2.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c04880 cf8ad045968b45726b4ee4b15777f592 296 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 7 285 1.3E-89 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 Tph_c04880 cf8ad045968b45726b4ee4b15777f592 296 SUPERFAMILY SSF161098 13 282 1.68E-36 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c21540 3e894dd48a35715d97918f10492e93c1 204 SUPERFAMILY SSF52374 5 201 2.43E-56 T 14-10-2018 Tph_c21540 3e894dd48a35715d97918f10492e93c1 204 Gene3D G3DSA:3.40.50.620 1 199 3.0E-63 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c21540 3e894dd48a35715d97918f10492e93c1 204 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 67 8.4E-9 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tph_c21540 3e894dd48a35715d97918f10492e93c1 204 Pfam PF01467 Cytidylyltransferase-like 8 174 4.5E-27 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Tph_c21540 3e894dd48a35715d97918f10492e93c1 204 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 4 200 31.989 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tph_c21540 3e894dd48a35715d97918f10492e93c1 204 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 8 199 1.9E-53 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tph_c11640 4c99311fa15089d9ecd8f7817242565e 273 Gene3D G3DSA:1.10.150.650 96 167 6.5E-86 T 14-10-2018 Tph_c11640 4c99311fa15089d9ecd8f7817242565e 273 SMART SM00481 3 68 2.0E-17 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tph_c11640 4c99311fa15089d9ecd8f7817242565e 273 SUPERFAMILY SSF89550 1 247 2.55E-44 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c11640 4c99311fa15089d9ecd8f7817242565e 273 Pfam PF02811 PHP domain 4 168 2.2E-10 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tph_c11640 4c99311fa15089d9ecd8f7817242565e 273 Gene3D G3DSA:3.20.20.140 4 243 6.5E-86 T 14-10-2018 Tph_c01670 efa87d317dc92c3f1174013d2b3c7532 215 Gene3D G3DSA:3.10.20.10 29 102 1.0E-10 T 14-10-2018 Tph_c01670 efa87d317dc92c3f1174013d2b3c7532 215 Pfam PF02634 FdhD/NarQ family 27 205 5.5E-39 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c01670 efa87d317dc92c3f1174013d2b3c7532 215 Gene3D G3DSA:3.40.140.10 112 206 6.7E-20 T 14-10-2018 Tph_c01670 efa87d317dc92c3f1174013d2b3c7532 215 SUPERFAMILY SSF53927 5 206 8.12E-41 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.6E-61 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 SUPERFAMILY SSF53901 4 252 1.06E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 SMART SM00825 Beta-ketoacyl synthase 6 414 4.2E-17 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 SUPERFAMILY SSF53901 215 412 4.66E-72 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 2.4E-195 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 Gene3D G3DSA:3.40.47.10 257 401 1.0E-54 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 PIRSF PIRSF000447 1 414 2.7E-187 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 5.3E-38 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Tph_c13720 9871a560b7ede2817fc4cb4aa0ca69a7 414 Gene3D G3DSA:3.40.47.10 1 255 2.2E-101 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Tph_c05600 68f8f8068dcfa545ef5e2b63db0d9f9c 364 Gene3D G3DSA:1.10.1610.10 15 346 7.3E-137 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c05600 68f8f8068dcfa545ef5e2b63db0d9f9c 364 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 19 354 2.0E-140 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c05600 68f8f8068dcfa545ef5e2b63db0d9f9c 364 Gene3D G3DSA:3.40.50.10210 61 337 7.3E-137 T 14-10-2018 Tph_c05600 68f8f8068dcfa545ef5e2b63db0d9f9c 364 SUPERFAMILY SSF52733 10 354 9.29E-122 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c05600 68f8f8068dcfa545ef5e2b63db0d9f9c 364 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 17 356 36.445 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c05600 68f8f8068dcfa545ef5e2b63db0d9f9c 364 Pfam PF02277 Phosphoribosyltransferase 15 354 7.3E-138 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 SUPERFAMILY SSF53686 1 305 5.37E-105 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 294 3.8E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 1.4E-132 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 Gene3D G3DSA:3.40.50.1100 9 300 2.1E-124 T 14-10-2018 Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 3.5E-138 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Tph_c20890 d1874b5c7dcc3826869d337751bdbb08 309 Gene3D G3DSA:3.40.50.1100 45 146 2.1E-124 T 14-10-2018 Tph_c11570 5a19523370ee1a3e43a55f1ad3d76b76 192 Gene3D G3DSA:3.90.1140.10 4 191 7.9E-50 T 14-10-2018 Tph_c11570 5a19523370ee1a3e43a55f1ad3d76b76 192 SUPERFAMILY SSF55144 5 190 1.92E-39 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Tph_c11570 5a19523370ee1a3e43a55f1ad3d76b76 192 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 189 4.7E-42 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Tph_c11570 5a19523370ee1a3e43a55f1ad3d76b76 192 Pfam PF02834 LigT like Phosphoesterase 10 94 3.8E-10 T 14-10-2018 IPR014051 Phosphoesterase, HXTX Tph_c11570 5a19523370ee1a3e43a55f1ad3d76b76 192 Pfam PF02834 LigT like Phosphoesterase 103 181 6.5E-12 T 14-10-2018 IPR014051 Phosphoesterase, HXTX Tph_c11570 5a19523370ee1a3e43a55f1ad3d76b76 192 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 189 22.297 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 Tph_c21560 687d6c4163421713553106b11df35f71 394 PIRSF PIRSF000729 10 378 7.7E-141 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Tph_c21560 687d6c4163421713553106b11df35f71 394 SUPERFAMILY SSF88697 286 376 7.46E-24 T 14-10-2018 IPR015947 PUA-like superfamily Tph_c21560 687d6c4163421713553106b11df35f71 394 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 4.8E-53 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 Gene3D G3DSA:2.30.130.10 275 377 3.1E-35 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 Tph_c21560 687d6c4163421713553106b11df35f71 394 TIGRFAM TIGR01027 proB: glutamate 5-kinase 15 375 1.7E-138 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 Pfam PF00696 Amino acid kinase family 15 243 1.4E-40 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tph_c21560 687d6c4163421713553106b11df35f71 394 Pfam PF01472 PUA domain 286 360 2.9E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 Tph_c21560 687d6c4163421713553106b11df35f71 394 SMART SM00359 286 369 1.4E-14 T 14-10-2018 IPR002478 PUA domain GO:0003723 Tph_c21560 687d6c4163421713553106b11df35f71 394 SUPERFAMILY SSF53633 15 266 2.62E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c21560 687d6c4163421713553106b11df35f71 394 Gene3D G3DSA:3.40.1160.10 3 274 1.0E-93 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c21560 687d6c4163421713553106b11df35f71 394 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 37.651 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Tph_c20270 6d9f2fadf7a5021ba253f8694ede39d6 458 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 445 8.5E-116 T 14-10-2018 IPR006230 Protein MutL Tph_c20270 6d9f2fadf7a5021ba253f8694ede39d6 458 Pfam PF13941 MutL protein 4 449 1.6E-154 T 14-10-2018 IPR006230 Protein MutL Tph_c20270 6d9f2fadf7a5021ba253f8694ede39d6 458 PIRSF PIRSF004729 1 452 1.8E-132 T 14-10-2018 IPR006230 Protein MutL Tph_c24750 f4776f5dc7d43f3faed0e79c977523cc 108 TIGRFAM TIGR03912 PylS_Nterm: pyrrolysine--tRNA ligase, N-terminal region 11 99 4.0E-35 T 14-10-2018 IPR023878 Pyrrolysyl-tRNA ligase, N-terminal GO:0004812 KEGG: 00970+6.1.1.26 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 SUPERFAMILY SSF52540 107 406 2.12E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Pfam PF10396 GTP-binding protein TrmE N-terminus 35 155 5.5E-36 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 33 489 32.87 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 252 396 2.3E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Gene3D G3DSA:3.40.50.300 251 417 1.0E-102 T 14-10-2018 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Pfam PF01926 50S ribosome-binding GTPase 253 365 2.9E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Gene3D G3DSA:1.20.120.430 156 489 1.0E-102 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Pfam PF12631 MnmE helical domain 158 486 1.2E-50 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 40 489 5.3E-115 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 Tph_c00290 1e403d9fba80654d998715790c47be7f 489 Gene3D G3DSA:3.30.1360.120 19 155 1.2E-45 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Tph_c06710 176683dbab84ec3d4e0706c817680353 355 SUPERFAMILY SSF55608 162 260 5.1E-13 T 14-10-2018 IPR027434 Homing endonuclease Tph_c06710 176683dbab84ec3d4e0706c817680353 355 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 43 344 1.3E-74 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like Tph_c06710 176683dbab84ec3d4e0706c817680353 355 Pfam PF02650 WhiA C-terminal HTH domain 260 342 1.8E-28 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal Tph_c06710 176683dbab84ec3d4e0706c817680353 355 Gene3D G3DSA:1.10.10.10 255 348 1.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c06710 176683dbab84ec3d4e0706c817680353 355 Gene3D G3DSA:3.10.28.10 36 254 3.1E-46 T 14-10-2018 IPR027434 Homing endonuclease Tph_c06710 176683dbab84ec3d4e0706c817680353 355 Pfam PF14527 WhiA LAGLIDADG-like domain 166 257 2.3E-27 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain Tph_c06710 176683dbab84ec3d4e0706c817680353 355 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 42 346 28.885 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 Tph_c06710 176683dbab84ec3d4e0706c817680353 355 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 58 143 9.3E-13 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain Tph_c00380 cf9f8e5760c36f8080fe50d2fba75c9e 167 Pfam PF14584 Protein of unknown function (DUF4446) 17 158 1.1E-39 T 14-10-2018 IPR027981 Protein of unknown function DUF4446 Tph_c27080 09ce01aaacebe5ed0c78ddc7796057b0 428 PIRSF PIRSF006054 2 423 3.8E-118 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 Tph_c27080 09ce01aaacebe5ed0c78ddc7796057b0 428 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 4 421 32.188 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 Tph_c27080 09ce01aaacebe5ed0c78ddc7796057b0 428 Pfam PF03313 Serine dehydratase alpha chain 87 416 1.3E-44 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Tph_c22160 a7ea6b0debfd8600ed1e277bb53ea882 124 Gene3D G3DSA:3.30.160.170 27 120 3.5E-17 T 14-10-2018 IPR035924 FlaG-like superfamily Tph_c22160 a7ea6b0debfd8600ed1e277bb53ea882 124 SUPERFAMILY SSF160214 62 123 2.09E-21 T 14-10-2018 IPR035924 FlaG-like superfamily Tph_c22160 a7ea6b0debfd8600ed1e277bb53ea882 124 Pfam PF03646 FlaG protein 52 122 3.9E-21 T 14-10-2018 IPR005186 FlaG protein Tph_c20850 c0aac483746b11c6b105f21010465655 611 SUPERFAMILY SSF52540 201 555 1.77E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20850 c0aac483746b11c6b105f21010465655 611 SMART SM00490 427 507 1.9E-23 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c20850 c0aac483746b11c6b105f21010465655 611 Pfam PF00271 Helicase conserved C-terminal domain 401 507 7.2E-21 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c20850 c0aac483746b11c6b105f21010465655 611 SMART SM00487 83 270 6.6E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c20850 c0aac483746b11c6b105f21010465655 611 SUPERFAMILY SSF52540 83 299 1.05E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20850 c0aac483746b11c6b105f21010465655 611 Gene3D G3DSA:3.40.50.300 322 603 1.2E-48 T 14-10-2018 Tph_c20850 c0aac483746b11c6b105f21010465655 611 Pfam PF00176 SNF2 family N-terminal domain 106 333 2.8E-34 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Tph_c20850 c0aac483746b11c6b105f21010465655 611 Gene3D G3DSA:3.40.50.10810 84 321 8.3E-69 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Gene3D G3DSA:3.40.50.970 358 532 1.4E-15 T 14-10-2018 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 SUPERFAMILY SSF52518 344 526 8.73E-24 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Pfam PF00037 4Fe-4S binding domain 563 585 2.2E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 PIRSF PIRSF006439 1 591 1.3E-205 T 14-10-2018 IPR017721 Indolepyruvate ferredoxin oxidoreductase, alpha subunit GO:0043805|GO:0055114 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 SUPERFAMILY SSF54862 534 590 3.57E-10 T 14-10-2018 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Gene3D G3DSA:3.30.70.20 535 592 3.3E-7 T 14-10-2018 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Gene3D G3DSA:3.40.50.970 1 180 1.7E-52 T 14-10-2018 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Gene3D G3DSA:3.40.50.920 219 306 2.0E-5 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 16 188 3.2E-11 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 SUPERFAMILY SSF52518 3 210 6.28E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 SUPERFAMILY SSF52922 228 285 8.97E-9 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c23790 6ccef66e20f01a7038c5db0ef454e198 593 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 373 515 2.6E-22 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tph_c04070 3252f0b28de99c5d298b33d731ac3b50 323 Gene3D G3DSA:3.30.460.20 3 132 2.2E-23 T 14-10-2018 Tph_c04070 3252f0b28de99c5d298b33d731ac3b50 323 SUPERFAMILY SSF143865 1 258 1.18E-42 T 14-10-2018 Tph_c04070 3252f0b28de99c5d298b33d731ac3b50 323 Gene3D G3DSA:1.20.58.340 133 265 1.5E-23 T 14-10-2018 Tph_c04070 3252f0b28de99c5d298b33d731ac3b50 323 SUPERFAMILY SSF144083 259 320 3.79E-14 T 14-10-2018 Tph_c04070 3252f0b28de99c5d298b33d731ac3b50 323 Pfam PF01544 CorA-like Mg2+ transporter protein 25 317 6.1E-54 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tph_c04070 3252f0b28de99c5d298b33d731ac3b50 323 Gene3D G3DSA:1.20.58.340 267 321 3.6E-10 T 14-10-2018 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 27 196 5.0E-69 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 Gene3D G3DSA:2.30.30.30 139 196 1.0E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 Pfam PF00467 KOW motif 146 177 1.2E-7 T 14-10-2018 IPR005824 KOW Tph_c26090 90bc16427373cd69544855a6f23d978b 196 PRINTS PR00338 Transcription termination factor NUSG signature 79 91 2.2E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 PRINTS PR00338 Transcription termination factor NUSG signature 172 188 2.2E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 PRINTS PR00338 Transcription termination factor NUSG signature 154 169 2.2E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 ProSitePatterns PS01014 Transcription termination factor nusG signature. 179 188 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Tph_c26090 90bc16427373cd69544855a6f23d978b 196 Gene3D G3DSA:3.30.70.940 21 138 1.9E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 24 196 27.221 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 SMART SM00739 142 169 3.3E-5 T 14-10-2018 IPR005824 KOW Tph_c26090 90bc16427373cd69544855a6f23d978b 196 SUPERFAMILY SSF50104 140 196 1.12E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tph_c26090 90bc16427373cd69544855a6f23d978b 196 SUPERFAMILY SSF82679 24 133 5.75E-43 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 SMART SM00738 24 132 6.7E-54 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tph_c26090 90bc16427373cd69544855a6f23d978b 196 Pfam PF02357 Transcription termination factor nusG 25 129 1.8E-29 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Tph_c06890 08f2d1985d633ee56556be24989020f6 107 Pfam PF01527 Transposase 3 83 1.0E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c06890 08f2d1985d633ee56556be24989020f6 107 SUPERFAMILY SSF46689 2 97 2.15E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c18260 14b640a2674289d1f073cc0cd5ddfd20 230 PIRSF PIRSF021383 2 223 8.7E-52 T 14-10-2018 IPR014197 Sporulation protein YunB Tph_c18260 14b640a2674289d1f073cc0cd5ddfd20 230 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 22 217 4.5E-60 T 14-10-2018 IPR014197 Sporulation protein YunB Tph_c18260 14b640a2674289d1f073cc0cd5ddfd20 230 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 125 213 1.2E-33 T 14-10-2018 IPR014197 Sporulation protein YunB Tph_c13090 e476a58cbf16abc82934b289fd3cce8b 143 Gene3D G3DSA:3.10.490.10 1 115 5.1E-29 T 14-10-2018 Tph_c13090 e476a58cbf16abc82934b289fd3cce8b 143 SUPERFAMILY SSF110857 4 108 1.23E-26 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Tph_c13090 e476a58cbf16abc82934b289fd3cce8b 143 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 111 2.9E-27 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Tph_c22260 ba1f7edd735e345433f7c9dac94391cd 143 SUPERFAMILY SSF46785 30 85 2.11E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c22260 ba1f7edd735e345433f7c9dac94391cd 143 Pfam PF16864 Dimerisation domain 31 83 1.2E-9 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain Tph_c22260 ba1f7edd735e345433f7c9dac94391cd 143 Gene3D G3DSA:1.10.10.10 24 86 4.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c27000 7562c569a9523a8ebe956a98c12b6b7b 453 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 353 1.5E-21 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Tph_c27000 7562c569a9523a8ebe956a98c12b6b7b 453 Gene3D G3DSA:3.40.50.1100 180 365 1.3E-26 T 14-10-2018 Tph_c27000 7562c569a9523a8ebe956a98c12b6b7b 453 SUPERFAMILY SSF53686 65 367 5.89E-43 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c27000 7562c569a9523a8ebe956a98c12b6b7b 453 Gene3D G3DSA:3.40.50.1100 77 179 1.1E-20 T 14-10-2018 Tph_c26560 b6fe484b64370964fabdbd267bb345bb 200 Pfam PF09335 SNARE associated Golgi protein 37 164 1.4E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 SUPERFAMILY SSF89095 298 402 4.81E-36 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 Pfam PF02637 GatB domain 329 476 1.2E-58 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 SMART SM00845 329 476 1.6E-84 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 145 159 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 3 476 40.158 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 2 476 8.4E-189 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 SUPERFAMILY SSF55931 5 297 2.35E-125 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 Gene3D G3DSA:1.10.10.410 416 476 3.2E-28 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 Pfam PF02934 GatB/GatE catalytic domain 6 289 1.7E-117 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Tph_c08980 7e0601531c59676c976512c1d44fb94b 476 Gene3D G3DSA:1.10.150.380 302 414 1.8E-41 T 14-10-2018 Tph_c03060 32f6a1e55e76be2255d965a00f5473d5 150 Pfam PF13470 PIN domain 6 117 4.6E-11 T 14-10-2018 IPR002716 PIN domain Tph_c03060 32f6a1e55e76be2255d965a00f5473d5 150 SUPERFAMILY SSF88723 6 119 2.0E-7 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 PIRSF PIRSF001430 1 256 3.3E-82 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 241 9.2E-62 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 246 35.982 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 Pfam PF01416 tRNA pseudouridine synthase 145 247 3.3E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 Pfam PF01416 tRNA pseudouridine synthase 7 105 3.2E-12 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 SUPERFAMILY SSF55120 1 250 2.88E-86 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 Gene3D G3DSA:3.30.70.660 108 245 4.3E-46 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Tph_c25550 c18fb76c017e29a0203a8d50d158161b 262 Gene3D G3DSA:3.30.70.580 1 107 9.4E-35 T 14-10-2018 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 2.7E-98 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 Gene3D G3DSA:3.90.230.10 1 248 2.9E-108 T 14-10-2018 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 SUPERFAMILY SSF55920 1 247 5.5E-92 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 5.6E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 5.6E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 5.6E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 5.6E-22 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 41.689 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Tph_c25640 d5a0b32d66f5d5bb9ebceaf3cb0a6b4a 248 Pfam PF00557 Metallopeptidase family M24 12 239 6.1E-58 T 14-10-2018 IPR000994 Peptidase M24 Tph_c15950 733dc840f8e5309abd82fd9d624345d6 335 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 4 256 2.2E-52 T 14-10-2018 IPR008275 CoA enzyme activase Tph_c15950 733dc840f8e5309abd82fd9d624345d6 335 SUPERFAMILY SSF53067 4 256 7.53E-38 T 14-10-2018 Tph_c15950 733dc840f8e5309abd82fd9d624345d6 335 Gene3D G3DSA:3.30.420.40 100 240 1.3E-86 T 14-10-2018 Tph_c15950 733dc840f8e5309abd82fd9d624345d6 335 Gene3D G3DSA:3.30.420.40 5 256 1.3E-86 T 14-10-2018 Tph_c15950 733dc840f8e5309abd82fd9d624345d6 335 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 256 6.2E-43 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 Tph_c24200 f4d229a049bafb3df867eaaf6af0362a 412 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 4.2E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c24200 f4d229a049bafb3df867eaaf6af0362a 412 Pfam PF01548 Transposase 5 165 5.3E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 Gene3D G3DSA:2.20.25.90 1 56 3.6E-21 T 14-10-2018 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 SMART SM00926 1 55 1.9E-21 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 Pfam PF00384 Molybdopterin oxidoreductase 58 133 7.4E-19 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 2 54 5.6E-21 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 Gene3D G3DSA:3.40.50.740 59 133 3.4E-28 T 14-10-2018 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 SUPERFAMILY SSF53706 2 133 4.06E-55 T 14-10-2018 Tph_c26250 b3d8ad85d95bdec32660d272d605336b 133 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 182 188 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 38 52 2.5E-14 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 16 32 2.5E-14 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 179 191 2.5E-14 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 57 70 2.5E-14 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 Gene3D G3DSA:1.10.1020.10 64 160 1.5E-84 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 Gene3D G3DSA:3.40.50.150 12 246 1.5E-84 T 14-10-2018 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 SUPERFAMILY SSF53335 11 273 2.92E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 PIRSF PIRSF000398 7 275 2.6E-69 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 16 255 4.5E-63 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c04820 7747fb7100810b798a4ea9ec672497cb 275 TIGRFAM TIGR00571 dam: DNA adenine methylase 11 272 2.3E-87 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c14290 c005a033f9844711e783ae7472a731c9 149 Pfam PF01327 Polypeptide deformylase 4 146 8.8E-49 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 Hamap MF_00163 Peptide deformylase [def]. 2 147 27.868 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 SUPERFAMILY SSF56420 4 147 1.7E-56 T 14-10-2018 IPR036821 Peptide deformylase superfamily Tph_c14290 c005a033f9844711e783ae7472a731c9 149 Gene3D G3DSA:3.90.45.10 1 149 1.3E-55 T 14-10-2018 IPR036821 Peptide deformylase superfamily Tph_c14290 c005a033f9844711e783ae7472a731c9 149 PRINTS PR01576 Peptide deformylase signature 117 146 1.2E-33 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 PRINTS PR01576 Peptide deformylase signature 33 62 1.2E-33 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 PRINTS PR01576 Peptide deformylase signature 98 116 1.2E-33 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 PRINTS PR01576 Peptide deformylase signature 86 97 1.2E-33 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 PIRSF PIRSF004749 1 149 1.3E-50 T 14-10-2018 IPR023635 Peptide deformylase Tph_c14290 c005a033f9844711e783ae7472a731c9 149 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 144 1.0E-48 T 14-10-2018 IPR023635 Peptide deformylase Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 PRINTS PR00127 Clp protease catalytic subunit P signature 23 38 1.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 PRINTS PR00127 Clp protease catalytic subunit P signature 94 111 1.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 PRINTS PR00127 Clp protease catalytic subunit P signature 172 191 1.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 PRINTS PR00127 Clp protease catalytic subunit P signature 115 134 1.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 PRINTS PR00127 Clp protease catalytic subunit P signature 63 83 1.4E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 116 129 - T 14-10-2018 IPR033135 ClpP, histidine active site Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 7 197 45.199 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 Pfam PF00574 Clp protease 16 196 3.1E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 94 105 - T 14-10-2018 IPR018215 ClpP, Ser active site Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 7 195 2.7E-103 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 SUPERFAMILY SSF52096 14 196 5.25E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c04640 ff5c64754bfb2fbba564e929d39cbd9c 201 Gene3D G3DSA:3.90.226.10 1 199 3.0E-86 T 14-10-2018 Tph_c18310 db4b32e4413f957f7315d23f47b819db 349 Pfam PF04392 ABC transporter substrate binding protein 55 346 1.6E-96 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein Tph_c18310 db4b32e4413f957f7315d23f47b819db 349 Gene3D G3DSA:3.40.50.2300 73 318 5.3E-98 T 14-10-2018 Tph_c18310 db4b32e4413f957f7315d23f47b819db 349 SUPERFAMILY SSF53822 81 286 1.03E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tph_c18310 db4b32e4413f957f7315d23f47b819db 349 Gene3D G3DSA:3.40.50.2300 169 340 5.3E-98 T 14-10-2018 Tph_c25540 ac1d0efb182bab1b9ae45434c6019f46 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 29.415 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tph_c25540 ac1d0efb182bab1b9ae45434c6019f46 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 141 2.8E-63 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25540 ac1d0efb182bab1b9ae45434c6019f46 144 SUPERFAMILY SSF52161 1 138 4.19E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25540 ac1d0efb182bab1b9ae45434c6019f46 144 Pfam PF00572 Ribosomal protein L13 14 138 8.4E-58 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tph_c25540 ac1d0efb182bab1b9ae45434c6019f46 144 PIRSF PIRSF002181 1 143 5.8E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Tph_c25540 ac1d0efb182bab1b9ae45434c6019f46 144 Gene3D G3DSA:3.90.1180.10 1 142 8.8E-64 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c22860 615191d7d2fae3b63302b35eae367658 66 Gene3D G3DSA:2.40.50.890 2 66 2.9E-6 T 14-10-2018 Tph_c22860 615191d7d2fae3b63302b35eae367658 66 Pfam PF11213 Protein of unknown function (DUF3006) 3 64 7.9E-23 T 14-10-2018 IPR021377 Protein of unknown function DUF3006 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Gene3D G3DSA:3.40.50.740 425 629 3.6E-71 T 14-10-2018 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Pfam PF01568 Molydopterin dinucleotide binding domain 700 809 5.7E-15 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Gene3D G3DSA:2.40.40.20 670 839 1.8E-41 T 14-10-2018 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Gene3D G3DSA:3.40.228.10 191 424 1.6E-71 T 14-10-2018 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 SUPERFAMILY SSF53706 22 700 3.53E-138 T 14-10-2018 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Gene3D G3DSA:2.20.25.340 23 84 1.3E-19 T 14-10-2018 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Gene3D G3DSA:3.40.50.740 93 190 7.0E-24 T 14-10-2018 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 Pfam PF00384 Molybdopterin oxidoreductase 93 580 3.2E-41 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01430 4e36496c4602820a1eb2e041aa8742e5 865 SUPERFAMILY SSF50692 692 832 2.49E-33 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 5 220 46.44 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 4.9E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 Pfam PF01634 ATP phosphoribosyltransferase 55 215 1.9E-46 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 Gene3D G3DSA:3.40.190.10 7 208 1.2E-64 T 14-10-2018 Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 Gene3D G3DSA:3.40.190.10 96 188 1.2E-64 T 14-10-2018 Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 SUPERFAMILY SSF53850 3 218 2.15E-58 T 14-10-2018 Tph_c08820 7dfa97a4928f7d300ce8652f1bab4003 226 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 Tph_c20240 e547b57204c0a073b31796ec43e3b4b8 452 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 94 312 1.5E-20 T 14-10-2018 IPR010839 Acyclic terpene utilisation Tph_c09630 e04fb30c8bd7dfc595f1cda7c98389aa 460 Gene3D G3DSA:3.20.20.70 121 396 1.2E-45 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c09630 e04fb30c8bd7dfc595f1cda7c98389aa 460 SUPERFAMILY SSF102114 119 404 5.36E-61 T 14-10-2018 Tph_c09630 e04fb30c8bd7dfc595f1cda7c98389aa 460 Pfam PF13353 4Fe-4S single cluster domain 129 222 3.3E-8 T 14-10-2018 Tph_c09630 e04fb30c8bd7dfc595f1cda7c98389aa 460 Pfam PF04055 Radical SAM superfamily 128 262 6.6E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c09630 e04fb30c8bd7dfc595f1cda7c98389aa 460 SMART SM00729 122 319 7.0E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c09630 e04fb30c8bd7dfc595f1cda7c98389aa 460 Pfam PF13186 Iron-sulfur cluster-binding domain 342 395 1.0E-6 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c07040 052f492ab7c8be27dc142705772682a8 182 Pfam PF00936 BMC domain 4 76 5.7E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c07040 052f492ab7c8be27dc142705772682a8 182 Pfam PF00936 BMC domain 96 173 4.0E-22 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c07040 052f492ab7c8be27dc142705772682a8 182 SMART SM00877 3 77 6.7E-27 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c07040 052f492ab7c8be27dc142705772682a8 182 SMART SM00877 95 173 1.9E-25 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c07040 052f492ab7c8be27dc142705772682a8 182 Gene3D G3DSA:3.30.70.1710 3 79 2.1E-28 T 14-10-2018 Tph_c07040 052f492ab7c8be27dc142705772682a8 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 45 7.0E-10 T 14-10-2018 Tph_c07040 052f492ab7c8be27dc142705772682a8 182 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 155 5.0E-16 T 14-10-2018 Tph_c07040 052f492ab7c8be27dc142705772682a8 182 SUPERFAMILY SSF143414 3 90 3.53E-25 T 14-10-2018 IPR037233 CcmK-like superfamily Tph_c07040 052f492ab7c8be27dc142705772682a8 182 SUPERFAMILY SSF143414 95 179 4.58E-22 T 14-10-2018 IPR037233 CcmK-like superfamily Tph_c07040 052f492ab7c8be27dc142705772682a8 182 Gene3D G3DSA:3.30.70.1710 80 180 1.3E-31 T 14-10-2018 Tph_c07040 052f492ab7c8be27dc142705772682a8 182 PIRSF PIRSF034834 1 181 2.9E-57 T 14-10-2018 IPR011238 Polyhedral organelle shell protein PduT Tph_c28780 3fe1093949b690efdef6d43fd9c1e766 230 Pfam PF13177 DNA polymerase III, delta subunit 2 108 2.2E-28 T 14-10-2018 Tph_c28780 3fe1093949b690efdef6d43fd9c1e766 230 SUPERFAMILY SSF52540 12 128 2.05E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28780 3fe1093949b690efdef6d43fd9c1e766 230 Gene3D G3DSA:3.40.50.300 1 109 9.0E-31 T 14-10-2018 Tph_c01310 cfaf5f5d1bf019e8800f46f0711bd7d1 161 Pfam PF13508 Acetyltransferase (GNAT) domain 39 126 7.1E-8 T 14-10-2018 IPR000182 GNAT domain Tph_c01310 cfaf5f5d1bf019e8800f46f0711bd7d1 161 SUPERFAMILY SSF55729 29 130 1.06E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tph_c01310 cfaf5f5d1bf019e8800f46f0711bd7d1 161 Gene3D G3DSA:3.40.630.30 8 130 3.4E-15 T 14-10-2018 Tph_c01000 d40d9a1292966263415595b3488b41cb 69 Gene3D G3DSA:3.30.160.250 2 68 3.8E-17 T 14-10-2018 Tph_c01000 d40d9a1292966263415595b3488b41cb 69 SUPERFAMILY SSF143100 2 66 1.96E-23 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like Tph_c01000 d40d9a1292966263415595b3488b41cb 69 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 63 2.4E-9 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 Gene3D G3DSA:1.10.8.60 304 369 4.8E-21 T 14-10-2018 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 Gene3D G3DSA:3.40.50.300 119 303 5.2E-67 T 14-10-2018 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 SUPERFAMILY SSF52172 5 177 1.31E-31 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 Gene3D G3DSA:1.10.10.60 370 486 3.8E-5 T 14-10-2018 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 Pfam PF00158 Sigma-54 interaction domain 134 299 1.3E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 SMART SM00448 1 100 7.8E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 Gene3D G3DSA:3.40.50.2300 1 108 1.1E-27 T 14-10-2018 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 157 170 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 344 353 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 SMART SM00382 153 296 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 SUPERFAMILY SSF52540 133 374 4.02E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c08200 fdaa248d91583862e698eb416f51fb9e 486 Pfam PF00072 Response regulator receiver domain 6 99 2.2E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c27600 b2f1e4d45ed4c33c88994249bb8b385a 266 Gene3D G3DSA:3.20.20.20 1 266 8.9E-96 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27600 b2f1e4d45ed4c33c88994249bb8b385a 266 Pfam PF00809 Pterin binding enzyme 7 229 1.1E-28 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27600 b2f1e4d45ed4c33c88994249bb8b385a 266 SUPERFAMILY SSF51717 2 261 4.45E-81 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c02510 36b81713d66dde5f91f4359ecae8cbba 88 Pfam PF12651 Ribbon-helix-helix domain 6 37 2.3E-5 T 14-10-2018 IPR038733 Predicted DNA-binding protein, ribbon-helix-helix domain Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Pfam PF09397 Ftsk gamma domain 675 735 5.7E-27 T 14-10-2018 IPR018541 FtsK gamma domain Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 SMART SM00843 672 737 1.9E-33 T 14-10-2018 IPR018541 FtsK gamma domain Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Pfam PF01580 FtsK/SpoIIIE family 382 514 2.9E-49 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Pfam PF01580 FtsK/SpoIIIE family 516 575 2.8E-16 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 SMART SM00382 417 599 1.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Gene3D G3DSA:3.30.980.40 274 377 3.1E-36 T 14-10-2018 Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 38 175 8.8E-8 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 SUPERFAMILY SSF52540 355 645 2.12E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 SUPERFAMILY SSF46785 674 738 3.65E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Gene3D G3DSA:3.40.50.300 379 660 3.6E-110 T 14-10-2018 Tph_c11500 aa39e4fed5220ea7c5cf74d5411279d3 745 Gene3D G3DSA:1.10.10.10 668 733 1.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.8E-72 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 SUPERFAMILY SSF47973 3 152 7.85E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 PIRSF PIRSF002122 5 156 6.3E-62 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 1.6E-69 T 14-10-2018 IPR023798 Ribosomal protein S7 domain Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 Gene3D G3DSA:1.10.455.10 2 156 9.8E-67 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Tph_c25890 ca4d8b794a7f81005ed14b2a168f1250 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.469 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 196 229 0.0032 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 127 160 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 230 263 3.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 93 126 0.0016 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 161 194 3.5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 59 92 1.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SMART SM00028 264 297 5.5E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 Gene3D G3DSA:1.25.40.10 45 158 6.6E-21 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 Gene3D G3DSA:1.25.40.10 160 328 6.7E-38 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 Pfam PF04733 Coatomer epsilon subunit 120 299 5.2E-9 T 14-10-2018 Tph_c14940 079d082454d37bba0d0067af68fe8d73 328 SUPERFAMILY SSF48452 51 325 2.28E-39 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c03430 5e500efad7b983bf0747dbebd9c5848c 399 Pfam PF00005 ABC transporter 21 167 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c03430 5e500efad7b983bf0747dbebd9c5848c 399 SMART SM00382 28 215 4.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03430 5e500efad7b983bf0747dbebd9c5848c 399 ProDom PD064925 ATP-BINDING ABC NUCLEOTIDE-BINDING MEMBRANE TRANSPORTER IRON TRANSPORTER COMPOUND ATPASE III 288 369 3.0E-11 T 14-10-2018 IPR020322 Uncharacterised domain MJ0874 Tph_c03430 5e500efad7b983bf0747dbebd9c5848c 399 SUPERFAMILY SSF52540 4 231 1.66E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03430 5e500efad7b983bf0747dbebd9c5848c 399 Gene3D G3DSA:3.40.50.300 3 250 6.9E-66 T 14-10-2018 Tph_c15830 cf94544ae61ca2169681397190c30cd9 205 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 29 188 1.2E-43 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tph_c15830 cf94544ae61ca2169681397190c30cd9 205 Pfam PF00849 RNA pseudouridylate synthase 26 157 2.2E-19 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c15830 cf94544ae61ca2169681397190c30cd9 205 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 62 76 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Tph_c15830 cf94544ae61ca2169681397190c30cd9 205 Gene3D G3DSA:3.30.70.1560 86 177 1.4E-52 T 14-10-2018 Tph_c15830 cf94544ae61ca2169681397190c30cd9 205 Gene3D G3DSA:3.30.70.580 27 185 1.4E-52 T 14-10-2018 Tph_c15830 cf94544ae61ca2169681397190c30cd9 205 SUPERFAMILY SSF55120 24 193 6.24E-42 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c22380 4e676b8510b2f1815fce2dc51d7d3de1 205 PIRSF PIRSF006578 2 202 3.1E-84 T 14-10-2018 IPR026328 Formylmethanofuran dehydrogenase, subunit E Tph_c22380 4e676b8510b2f1815fce2dc51d7d3de1 205 Gene3D G3DSA:3.30.1330.130 1 162 1.4E-47 T 14-10-2018 Tph_c22380 4e676b8510b2f1815fce2dc51d7d3de1 205 SUPERFAMILY SSF143555 5 166 5.89E-52 T 14-10-2018 Tph_c22380 4e676b8510b2f1815fce2dc51d7d3de1 205 Pfam PF02663 FmdE, Molybdenum formylmethanofuran dehydrogenase operon 14 150 9.8E-45 T 14-10-2018 IPR003814 Formylmethanofuran dehydrogenase, subunit E domain Tph_c22380 4e676b8510b2f1815fce2dc51d7d3de1 205 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 164 199 1.1E-9 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 Tph_c17360 2b91fea5a281102fed116679abab22be 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 10 623 1.3E-266 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Tph_c17360 2b91fea5a281102fed116679abab22be 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 8 625 42.321 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 Tph_c17360 2b91fea5a281102fed116679abab22be 630 Gene3D G3DSA:3.50.50.60 3 223 7.3E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17360 2b91fea5a281102fed116679abab22be 630 Gene3D G3DSA:3.50.50.60 296 460 1.8E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17360 2b91fea5a281102fed116679abab22be 630 Pfam PF01134 Glucose inhibited division protein A 11 400 1.2E-164 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 Tph_c17360 2b91fea5a281102fed116679abab22be 630 Pfam PF13932 GidA associated domain 403 617 1.0E-73 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 Tph_c17360 2b91fea5a281102fed116679abab22be 630 SUPERFAMILY SSF51905 9 263 2.57E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17360 2b91fea5a281102fed116679abab22be 630 Gene3D G3DSA:1.10.10.1800 461 551 1.4E-19 T 14-10-2018 Tph_c17360 2b91fea5a281102fed116679abab22be 630 SMART SM01228 547 618 1.7E-38 T 14-10-2018 Tph_c17360 2b91fea5a281102fed116679abab22be 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 5.2E-5 T 14-10-2018 Tph_c17360 2b91fea5a281102fed116679abab22be 630 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 5.2E-5 T 14-10-2018 Tph_c17360 2b91fea5a281102fed116679abab22be 630 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 370 393 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tph_c17360 2b91fea5a281102fed116679abab22be 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 275 289 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 Tph_c17360 2b91fea5a281102fed116679abab22be 630 Gene3D G3DSA:1.10.150.570 570 622 3.1E-23 T 14-10-2018 Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 SMART SM00857 36 185 6.2E-49 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 Gene3D G3DSA:1.10.10.2600 170 317 1.9E-19 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 Pfam PF07508 Recombinase 207 315 3.5E-24 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 Pfam PF00239 Resolvase, N terminal domain 36 184 4.8E-33 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 Gene3D G3DSA:3.40.50.1390 31 167 1.7E-51 T 14-10-2018 Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 Pfam PF13408 Recombinase zinc beta ribbon domain 339 399 1.4E-11 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c07870 a6188bebe8b0ddabda5ca76957681cd7 557 SUPERFAMILY SSF53041 35 184 5.75E-36 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Gene3D G3DSA:3.30.457.10 446 514 3.2E-15 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 SUPERFAMILY SSF55383 450 516 2.35E-19 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Gene3D G3DSA:1.20.1600.10 254 402 1.1E-11 T 14-10-2018 Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Gene3D G3DSA:1.20.1600.10 27 253 2.7E-24 T 14-10-2018 Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Pfam PF07833 Copper amine oxidase N-terminal domain 402 446 1.3E-6 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Pfam PF07833 Copper amine oxidase N-terminal domain 430 524 3.4E-26 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 SUPERFAMILY SSF56954 10 371 3.27E-43 T 14-10-2018 Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Pfam PF02321 Outer membrane efflux protein 253 369 1.9E-10 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 Pfam PF02321 Outer membrane efflux protein 104 198 1.3E-7 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tph_c02030 d0cb46c0a6db326b1ab540e71ac1a316 526 SUPERFAMILY SSF55383 401 446 2.88E-7 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 Pfam PF01890 Cobalamin synthesis G C-terminus 230 351 3.0E-30 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 Gene3D G3DSA:3.30.420.180 221 355 3.1E-36 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 SUPERFAMILY SSF159664 223 354 9.81E-34 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 Pfam PF11760 Cobalamin synthesis G N-terminal 55 134 6.7E-32 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 Gene3D G3DSA:3.40.50.11220 8 129 3.6E-30 T 14-10-2018 Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 Pfam PF11761 Cobalamin biosynthesis central region 140 182 2.1E-6 T 14-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Tph_c05260 c791e713542052b07d5728e4cdd19e37 367 SUPERFAMILY SSF159672 14 237 3.79E-55 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Tph_c15710 9670c86c46575eee8bb231c01a7c6467 224 SUPERFAMILY SSF52540 2 222 4.13E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15710 9670c86c46575eee8bb231c01a7c6467 224 Gene3D G3DSA:3.40.50.300 2 223 2.1E-78 T 14-10-2018 Tph_c15710 9670c86c46575eee8bb231c01a7c6467 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 219 5.8E-67 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tph_c15710 9670c86c46575eee8bb231c01a7c6467 224 Pfam PF02224 Cytidylate kinase 7 221 1.5E-69 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tph_c15710 9670c86c46575eee8bb231c01a7c6467 224 Hamap MF_00238 Cytidylate kinase [cmk]. 5 224 31.271 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Tph_c18360 45fa0b3ecdb3c9927021dac46b030cda 372 Gene3D G3DSA:3.40.1390.30 1 125 1.2E-29 T 14-10-2018 Tph_c18360 45fa0b3ecdb3c9927021dac46b030cda 372 SUPERFAMILY SSF102705 4 371 1.96E-125 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Tph_c18360 45fa0b3ecdb3c9927021dac46b030cda 372 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 350 1.9E-77 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Tph_c18360 45fa0b3ecdb3c9927021dac46b030cda 372 Gene3D G3DSA:3.30.70.120 131 240 7.2E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c18360 45fa0b3ecdb3c9927021dac46b030cda 372 PIRSF PIRSF037489 1 372 1.1E-140 T 14-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria Tph_c18360 45fa0b3ecdb3c9927021dac46b030cda 372 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 362 9.6E-63 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 SUPERFAMILY SSF56821 12 738 6.87E-253 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 Gene3D G3DSA:3.40.970.20 504 594 4.6E-33 T 14-10-2018 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 Gene3D G3DSA:3.40.50.2030 131 319 1.4E-48 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 TIGRFAM TIGR00316 cdhC: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit 326 734 3.7E-136 T 14-10-2018 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 Gene3D G3DSA:3.40.1470.10 609 738 4.1E-52 T 14-10-2018 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 Gene3D G3DSA:3.30.1650.10 326 503 6.2E-74 T 14-10-2018 IPR038571 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase, domain 3 superfamily KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 Pfam PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit 328 482 1.3E-68 T 14-10-2018 IPR004461 CO dehydrogenase/acetyl-CoA synthase complex beta subunit GO:0006084|GO:0018492 KEGG: 00720+2.3.1.169|MetaCyc: PWY-7784 Tph_c15170 be3cfb97e7426e57bd7284ab77f81559 739 Gene3D G3DSA:1.10.8.190 7 129 1.4E-37 T 14-10-2018 Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 SUPERFAMILY SSF52540 75 232 5.69E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 Pfam PF02421 Ferrous iron transport protein B 74 228 1.4E-56 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 71 191 1.2E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 141 159 7.8E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 96 114 7.8E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 75 95 7.8E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c04560 75a5f95e472e0aa7a9da2693eada4c2b 237 Gene3D G3DSA:3.40.50.300 70 237 2.2E-45 T 14-10-2018 Tph_c03730 8829f280f452cad05c930583869bc3e2 179 Pfam PF07853 Protein of unknown function (DUF1648) 24 72 2.2E-14 T 14-10-2018 IPR012867 Domain of unknown function DUF1648 Tph_c04340 039edaacc34b2e2303913140f1687261 133 Gene3D G3DSA:3.30.70.1290 1 129 4.9E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tph_c04340 039edaacc34b2e2303913140f1687261 133 Pfam PF01797 Transposase IS200 like 13 130 7.3E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tph_c04340 039edaacc34b2e2303913140f1687261 133 SUPERFAMILY SSF143422 6 131 6.41E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tph_c04340 039edaacc34b2e2303913140f1687261 133 SMART SM01321 13 130 5.1E-43 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 Gene3D G3DSA:3.30.1330.30 1 74 1.1E-11 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 Pfam PF00588 SpoU rRNA Methylase family 95 234 5.6E-36 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 SUPERFAMILY SSF75217 66 241 2.16E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 1.2E-21 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 SMART SM00967 4 78 4.9E-23 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 SUPERFAMILY SSF55315 2 74 1.14E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 Gene3D G3DSA:3.40.1280.10 76 241 3.3E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tph_c04950 1214a2f415fa159fcaeeb22a83052c9c 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 240 5.9E-64 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Tph_c17980 5e80e392637f9aeb7a4d1a02940b36de 356 Pfam PF01758 Sodium Bile acid symporter family 54 252 4.9E-65 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 Tph_c17980 5e80e392637f9aeb7a4d1a02940b36de 356 Gene3D G3DSA:1.20.1530.20 4 343 7.2E-25 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Tph_c17980 5e80e392637f9aeb7a4d1a02940b36de 356 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 9 340 1.7E-139 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Tph_c17980 5e80e392637f9aeb7a4d1a02940b36de 356 PIRSF PIRSF005508 1 353 3.4E-141 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 Tph_c11520 798ec68179a81d930bbbe8d438b720e8 246 Pfam PF13413 Helix-turn-helix domain 7 66 1.3E-25 T 14-10-2018 Tph_c11520 798ec68179a81d930bbbe8d438b720e8 246 SMART SM00530 6 67 0.0036 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c11520 798ec68179a81d930bbbe8d438b720e8 246 Pfam PF13464 Domain of unknown function (DUF4115) 168 234 1.1E-18 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 Tph_c11520 798ec68179a81d930bbbe8d438b720e8 246 Gene3D G3DSA:1.10.260.40 1 102 8.9E-30 T 14-10-2018 Tph_c11520 798ec68179a81d930bbbe8d438b720e8 246 SUPERFAMILY SSF47413 4 69 6.95E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 Hamap MF_00020 Acetate kinase [ackA]. 1 402 176.63 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 Pfam PF00871 Acetokinase family 2 392 4.8E-143 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 TIGRFAM TIGR00016 ackA: acetate kinase 2 398 1.8E-150 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 SUPERFAMILY SSF53067 2 197 5.61E-63 T 14-10-2018 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 SUPERFAMILY SSF53067 160 400 1.0E-84 T 14-10-2018 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 PRINTS PR00471 Acetate kinase family signature 174 187 7.7E-37 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 PRINTS PR00471 Acetate kinase family signature 204 225 7.7E-37 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 PRINTS PR00471 Acetate kinase family signature 323 339 7.7E-37 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 PRINTS PR00471 Acetate kinase family signature 3 14 7.7E-37 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 PRINTS PR00471 Acetate kinase family signature 380 392 7.7E-37 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 PRINTS PR00471 Acetate kinase family signature 301 314 7.7E-37 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 Gene3D G3DSA:3.30.420.40 197 410 2.4E-77 T 14-10-2018 Tph_c10090 15ae50fbcf7ef7bf52628cbc2cb17ab0 449 Gene3D G3DSA:3.30.420.40 1 196 4.2E-69 T 14-10-2018 Tph_c16550 c0f41b6febcc46b03e3f7c279642737b 270 Pfam PF04350 Pilus assembly protein, PilO 40 163 9.8E-8 T 14-10-2018 IPR007445 Pilus assembly protein, PilO Tph_c16550 c0f41b6febcc46b03e3f7c279642737b 270 Gene3D G3DSA:3.30.70.60 93 188 1.5E-8 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Tph_c25070 d5985debbb7e68d5a1dc6f3be507981f 353 Gene3D G3DSA:1.20.1250.20 165 343 8.1E-17 T 14-10-2018 Tph_c25070 d5985debbb7e68d5a1dc6f3be507981f 353 SUPERFAMILY SSF103473 8 339 5.23E-44 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c25070 d5985debbb7e68d5a1dc6f3be507981f 353 Pfam PF07690 Major Facilitator Superfamily 8 274 8.2E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c25070 d5985debbb7e68d5a1dc6f3be507981f 353 ProSitePatterns PS00216 Sugar transport proteins signature 1. 14 30 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Tph_c25070 d5985debbb7e68d5a1dc6f3be507981f 353 Gene3D G3DSA:1.20.1250.20 1 147 9.1E-21 T 14-10-2018 Tph_c22750 a4a3e2087e82065c4440b111624864bd 419 PIRSF PIRSF029895 2 411 5.0E-85 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD Tph_c22750 a4a3e2087e82065c4440b111624864bd 419 Pfam PF06898 Putative stage IV sporulation protein YqfD 9 398 4.2E-116 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD Tph_c22750 a4a3e2087e82065c4440b111624864bd 419 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 6 399 2.7E-89 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD Tph_c23870 97d5830e31717315088ad44444f7bdc4 367 SUPERFAMILY SSF52922 251 350 1.83E-20 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c23870 97d5830e31717315088ad44444f7bdc4 367 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 259 339 5.7E-18 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II Tph_c23870 97d5830e31717315088ad44444f7bdc4 367 Gene3D G3DSA:3.40.50.920 248 360 1.1E-19 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c23870 97d5830e31717315088ad44444f7bdc4 367 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 23 251 2.6E-44 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 Tph_c23870 97d5830e31717315088ad44444f7bdc4 367 Gene3D G3DSA:3.40.50.970 2 194 5.1E-56 T 14-10-2018 Tph_c23870 97d5830e31717315088ad44444f7bdc4 367 SUPERFAMILY SSF52518 10 248 7.36E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c00710 e27ad05e54718da2965b230b506cb243 149 Hamap MF_00984 Single-stranded DNA-binding protein. 3 108 32.619 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Tph_c00710 e27ad05e54718da2965b230b506cb243 149 Pfam PF00436 Single-strand binding protein family 3 104 1.2E-35 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Tph_c00710 e27ad05e54718da2965b230b506cb243 149 SUPERFAMILY SSF50249 3 138 2.57E-45 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c00710 e27ad05e54718da2965b230b506cb243 149 Gene3D G3DSA:2.40.50.140 1 113 7.4E-44 T 14-10-2018 Tph_c00710 e27ad05e54718da2965b230b506cb243 149 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 110 2.2E-36 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Tph_c12960 7db525d65a9f40748e4ee3e441a77ebd 153 Pfam PF01252 Signal peptidase (SPase) II 16 148 2.1E-33 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tph_c12960 7db525d65a9f40748e4ee3e441a77ebd 153 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 152 15.289 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tph_c12960 7db525d65a9f40748e4ee3e441a77ebd 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 98 113 3.3E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tph_c12960 7db525d65a9f40748e4ee3e441a77ebd 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 130 146 3.3E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tph_c12960 7db525d65a9f40748e4ee3e441a77ebd 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 3.3E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tph_c12960 7db525d65a9f40748e4ee3e441a77ebd 153 TIGRFAM TIGR00077 lspA: signal peptidase II 8 149 3.8E-29 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Tph_c26550 0571bf489faad139e143f527031f8ab3 272 Gene3D G3DSA:3.20.20.70 1 263 3.0E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26550 0571bf489faad139e143f527031f8ab3 272 Pfam PF00793 DAHP synthetase I family 27 259 6.7E-75 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tph_c26550 0571bf489faad139e143f527031f8ab3 272 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 6 262 3.0E-120 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tph_c26550 0571bf489faad139e143f527031f8ab3 272 SUPERFAMILY SSF51569 2 270 8.79E-104 T 14-10-2018 Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 PIRSF PIRSF026546 4 215 6.0E-91 T 14-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 SUPERFAMILY SSF46785 5 79 6.16E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 SUPERFAMILY SSF54631 69 210 2.81E-21 T 14-10-2018 Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 Pfam PF08279 HTH domain 9 61 3.8E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 Pfam PF00571 CBS domain 147 208 4.6E-7 T 14-10-2018 IPR000644 CBS domain Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 Pfam PF00571 CBS domain 85 132 3.9E-5 T 14-10-2018 IPR000644 CBS domain Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 Gene3D G3DSA:3.10.580.10 64 215 6.8E-50 T 14-10-2018 Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 Gene3D G3DSA:1.10.10.10 2 63 1.2E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 SMART SM00116 153 209 0.0011 T 14-10-2018 IPR000644 CBS domain Tph_c05780 269c83a02ff6572007cce9380c5cd0b6 215 SMART SM00116 86 134 4.0 T 14-10-2018 IPR000644 CBS domain Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 SUPERFAMILY SSF51735 144 300 1.49E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 95 120 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 Hamap MF_01576 Bifunctional protein FolD [folD]. 23 302 32.959 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 Gene3D G3DSA:3.40.50.720 26 278 1.7E-97 T 14-10-2018 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 26 142 1.7E-35 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 Gene3D G3DSA:3.40.50.10860 28 296 1.7E-97 T 14-10-2018 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 145 301 7.8E-52 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 SUPERFAMILY SSF53223 21 142 2.88E-35 T 14-10-2018 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 131 152 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 53 75 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 224 253 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 258 274 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 275 293 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 94 121 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c16310 ad234dcfad72b5ef2cb9901d9def9bbb 305 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 176 196 1.2E-75 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Tph_c13220 dd742d801deebc95f31c6ebd38a7635b 298 Pfam PF04055 Radical SAM superfamily 75 207 1.3E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c13220 dd742d801deebc95f31c6ebd38a7635b 298 PIRSF PIRSF004869 3 295 4.8E-75 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted Tph_c13220 dd742d801deebc95f31c6ebd38a7635b 298 Gene3D G3DSA:3.20.20.70 66 293 3.6E-10 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c13220 dd742d801deebc95f31c6ebd38a7635b 298 SUPERFAMILY SSF102114 79 289 4.02E-7 T 14-10-2018 Tph_c07210 ce827ffb3aae5088b7662c82e469b907 94 Gene3D G3DSA:2.10.260.10 1 49 1.7E-6 T 14-10-2018 Tph_c07210 ce827ffb3aae5088b7662c82e469b907 94 SUPERFAMILY SSF89447 3 49 1.44E-8 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c19890 0b136acca3bebd9d352c051b87e5c873 295 ProSitePatterns PS00770 Aminotransferases class-IV signature. 184 213 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Tph_c19890 0b136acca3bebd9d352c051b87e5c873 295 Gene3D G3DSA:3.20.10.10 126 288 5.2E-57 T 14-10-2018 Tph_c19890 0b136acca3bebd9d352c051b87e5c873 295 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 6 286 3.0E-106 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Tph_c19890 0b136acca3bebd9d352c051b87e5c873 295 Gene3D G3DSA:3.30.470.10 2 125 2.4E-51 T 14-10-2018 Tph_c19890 0b136acca3bebd9d352c051b87e5c873 295 Pfam PF01063 Amino-transferase class IV 31 257 1.2E-58 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tph_c19890 0b136acca3bebd9d352c051b87e5c873 295 SUPERFAMILY SSF56752 3 283 1.57E-94 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 Gene3D G3DSA:3.40.50.1220 185 350 4.2E-69 T 14-10-2018 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 554 2.2E-259 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 Gene3D G3DSA:3.40.50.970 1 173 1.0E-67 T 14-10-2018 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 SUPERFAMILY SSF52467 186 352 9.82E-67 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 530 2.5E-51 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 3.8E-52 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 SUPERFAMILY SSF52518 1 182 3.06E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 Gene3D G3DSA:3.40.50.970 353 554 1.8E-75 T 14-10-2018 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 SUPERFAMILY SSF52518 357 553 6.08E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Tph_c19870 508d033cd1830e1adc7b91c53a7c8bb6 555 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 168 4.0E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Tph_c15730 5831073c78f1869709061f670731d828 345 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 328 2.1E-114 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tph_c15730 5831073c78f1869709061f670731d828 345 Gene3D G3DSA:3.30.70.1140 1 75 3.3E-18 T 14-10-2018 Tph_c15730 5831073c78f1869709061f670731d828 345 Gene3D G3DSA:3.20.20.70 76 332 1.5E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c15730 5831073c78f1869709061f670731d828 345 SUPERFAMILY SSF51569 1 335 2.84E-111 T 14-10-2018 Tph_c15730 5831073c78f1869709061f670731d828 345 Pfam PF00793 DAHP synthetase I family 90 331 2.5E-70 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tph_c05950 f0c21ceae3dfc966cf259ca9a2405c9d 201 PIRSF PIRSF006305 2 194 7.4E-59 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tph_c05950 f0c21ceae3dfc966cf259ca9a2405c9d 201 SUPERFAMILY SSF52972 6 188 2.42E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tph_c05950 f0c21ceae3dfc966cf259ca9a2405c9d 201 Gene3D G3DSA:3.90.950.10 5 195 6.5E-71 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tph_c05950 f0c21ceae3dfc966cf259ca9a2405c9d 201 Pfam PF02545 Maf-like protein 6 188 2.1E-58 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tph_c05950 f0c21ceae3dfc966cf259ca9a2405c9d 201 TIGRFAM TIGR00172 maf: septum formation protein Maf 5 185 7.4E-57 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tph_c05950 f0c21ceae3dfc966cf259ca9a2405c9d 201 Hamap MF_00528 Septum formation protein Maf [maf]. 6 193 32.762 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 Tph_c15570 59a9033c47e8f2c1d3acddfc5fc0e95b 495 SUPERFAMILY SSF52540 21 242 3.96E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15570 59a9033c47e8f2c1d3acddfc5fc0e95b 495 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 3 495 5.3E-247 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Tph_c15570 59a9033c47e8f2c1d3acddfc5fc0e95b 495 PIRSF PIRSF007466 3 495 4.5E-251 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Tph_c15570 59a9033c47e8f2c1d3acddfc5fc0e95b 495 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 3 495 2.0E-232 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 Tph_c15570 59a9033c47e8f2c1d3acddfc5fc0e95b 495 Gene3D G3DSA:3.40.50.300 13 238 2.6E-8 T 14-10-2018 Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 319 3.9E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 299 4.2E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 SMART SM00382 39 231 7.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 Gene3D G3DSA:3.40.50.300 1 322 1.9E-101 T 14-10-2018 Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 Pfam PF00005 ABC transporter 31 181 1.5E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c25290 146616da4cf40a1459b10240d3089ff4 322 SUPERFAMILY SSF52540 3 252 2.66E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 7 74 7.4E-33 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 Gene3D G3DSA:4.10.640.10 1 75 4.7E-31 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 SUPERFAMILY SSF46911 3 74 7.85E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 1.2E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 1.2E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 1.2E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 1.2E-17 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 75 21.654 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 Pfam PF01084 Ribosomal protein S18 21 70 1.8E-26 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 23 75 2.0E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00720 2f582bb5fadeace95c19e3aacf3f1846 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 23 46 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c14410 74897711545f312d2f833a0e5c386a39 189 SUPERFAMILY SSF53271 5 149 5.11E-40 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Tph_c14410 74897711545f312d2f833a0e5c386a39 189 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 189 27.0 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14410 74897711545f312d2f833a0e5c386a39 189 Gene3D G3DSA:3.40.50.2020 5 189 5.1E-64 T 14-10-2018 Tph_c14410 74897711545f312d2f833a0e5c386a39 189 Pfam PF00156 Phosphoribosyl transferase domain 50 172 3.1E-15 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Tph_c14410 74897711545f312d2f833a0e5c386a39 189 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 188 4.2E-70 T 14-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Tph_c02760 1bb501c9d75ec6320c50c97b5e829d60 552 Pfam PF13751 Transposase DDE domain 404 523 7.7E-20 T 14-10-2018 IPR025668 Transposase DDE domain Tph_c02760 1bb501c9d75ec6320c50c97b5e829d60 552 Pfam PF05598 Transposase domain (DUF772) 58 125 6.2E-8 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Tph_c01450 9b29242eed2b91ebf1f801694ef26c23 393 Gene3D G3DSA:1.20.1250.20 1 198 2.1E-26 T 14-10-2018 Tph_c01450 9b29242eed2b91ebf1f801694ef26c23 393 SUPERFAMILY SSF103473 2 387 3.79E-59 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c01450 9b29242eed2b91ebf1f801694ef26c23 393 Pfam PF07690 Major Facilitator Superfamily 14 352 5.5E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c01450 9b29242eed2b91ebf1f801694ef26c23 393 Gene3D G3DSA:1.20.1250.20 202 390 2.6E-25 T 14-10-2018 Tph_c26770 cf2010bee05ee16dc0e06c73a0d1c974 174 SUPERFAMILY SSF109604 10 163 1.59E-28 T 14-10-2018 Tph_c26770 cf2010bee05ee16dc0e06c73a0d1c974 174 Gene3D G3DSA:1.10.3210.10 4 165 1.0E-29 T 14-10-2018 Tph_c26770 cf2010bee05ee16dc0e06c73a0d1c974 174 Pfam PF01966 HD domain 34 148 9.6E-13 T 14-10-2018 IPR006674 HD domain Tph_c26770 cf2010bee05ee16dc0e06c73a0d1c974 174 SMART SM00471 29 158 3.0E-7 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 11 276 9.3E-107 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 108 2.0E-25 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 SUPERFAMILY SSF54675 3 109 1.22E-32 T 14-10-2018 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 Gene3D G3DSA:3.20.20.70 124 266 1.7E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 PIRSF PIRSF006250 4 279 1.4E-104 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 110 275 1.5E-65 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 Gene3D G3DSA:3.90.1170.20 14 274 1.7E-110 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Tph_c26610 747c5da2f52158a622f3a66319036ab2 286 SUPERFAMILY SSF51690 110 276 3.73E-63 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 Pfam PF00990 Diguanylate cyclase, GGDEF domain 146 226 3.2E-16 T 14-10-2018 IPR000160 GGDEF domain Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 SMART SM00448 8 121 4.0E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 Gene3D G3DSA:3.30.70.270 135 301 9.0E-21 T 14-10-2018 Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 SUPERFAMILY SSF52172 8 132 8.11E-43 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 Gene3D G3DSA:3.40.50.2300 2 134 1.4E-40 T 14-10-2018 Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 146 228 1.4E-17 T 14-10-2018 IPR000160 GGDEF domain Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 Pfam PF00072 Response regulator receiver domain 10 121 2.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 SUPERFAMILY SSF55073 137 245 3.92E-20 T 14-10-2018 IPR029787 Nucleotide cyclase Tph_c14960 3a630e2e879e1b5ab5180e32a4fe7684 314 SMART SM00267 121 265 2.6E-9 T 14-10-2018 IPR000160 GGDEF domain Tph_c14000 92fbcb5905a881541dcf3a2ea9e2c78a 62 Pfam PF00830 Ribosomal L28 family 3 57 2.4E-23 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c14000 92fbcb5905a881541dcf3a2ea9e2c78a 62 SUPERFAMILY SSF143800 3 61 6.87E-24 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c14000 92fbcb5905a881541dcf3a2ea9e2c78a 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 17.828 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c14000 92fbcb5905a881541dcf3a2ea9e2c78a 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 55 3.1E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c14000 92fbcb5905a881541dcf3a2ea9e2c78a 62 Gene3D G3DSA:2.30.170.40 18 62 1.2E-21 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c28540 54b744b9ffe9a1861eea3b9bffafadd4 334 SUPERFAMILY SSF50494 106 327 1.75E-15 T 14-10-2018 IPR009003 Peptidase S1, PA clan Tph_c28540 54b744b9ffe9a1861eea3b9bffafadd4 334 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 233 253 1.5E-6 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Tph_c28540 54b744b9ffe9a1861eea3b9bffafadd4 334 PRINTS PR00861 Alpha-lytic endopeptidase serine protease (S2A) signature 254 271 1.5E-6 T 14-10-2018 IPR001316 Peptidase S1A, streptogrisin GO:0004252|GO:0006508 Tph_c28540 54b744b9ffe9a1861eea3b9bffafadd4 334 Gene3D G3DSA:2.40.10.10 228 321 2.3E-16 T 14-10-2018 Tph_c20070 080af6c6a21363e43ebf8de547bc7afb 443 Pfam PF01609 Transposase DDE domain 154 418 8.5E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c20070 080af6c6a21363e43ebf8de547bc7afb 443 Pfam PF05598 Transposase domain (DUF772) 47 125 1.6E-7 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Tph_c22180 080af6c6a21363e43ebf8de547bc7afb 443 Pfam PF01609 Transposase DDE domain 154 418 8.5E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c22180 080af6c6a21363e43ebf8de547bc7afb 443 Pfam PF05598 Transposase domain (DUF772) 47 125 1.6E-7 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Tph_c15180 1ad3d3928de62973674262b465810847 678 Gene3D G3DSA:1.20.1270.30 86 261 6.6E-66 T 14-10-2018 IPR016101 CO dehydrogenase, alpha-bundle GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Tph_c15180 1ad3d3928de62973674262b465810847 678 TIGRFAM TIGR01702 CO_DH_cata: carbon-monoxide dehydrogenase, catalytic subunit 32 660 4.3E-221 T 14-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Tph_c15180 1ad3d3928de62973674262b465810847 678 Gene3D G3DSA:3.40.50.2030 262 432 2.4E-68 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c15180 1ad3d3928de62973674262b465810847 678 Gene3D G3DSA:3.40.50.2030 435 664 9.4E-80 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c15180 1ad3d3928de62973674262b465810847 678 SUPERFAMILY SSF56821 19 676 1.83E-196 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 Tph_c15180 1ad3d3928de62973674262b465810847 678 Pfam PF03063 Prismane/CO dehydrogenase family 69 643 6.5E-149 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 Tph_c15180 1ad3d3928de62973674262b465810847 678 PIRSF PIRSF005023 17 663 6.5E-233 T 14-10-2018 IPR010047 Ni-containing CO dehydrogenase GO:0006091|GO:0016151|GO:0018492|GO:0051539|GO:0055114 KEGG: 00633+1.2.7.4|KEGG: 00680+1.2.7.4|KEGG: 00720+1.2.7.4|MetaCyc: PWY-5372|MetaCyc: PWY-6780|MetaCyc: PWY-7784 Tph_c28360 1c8c8b99160c56836a8eaec087fc29ec 262 SUPERFAMILY SSF53448 5 250 6.76E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c28360 1c8c8b99160c56836a8eaec087fc29ec 262 Pfam PF12804 MobA-like NTP transferase domain 7 166 3.5E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase Tph_c28360 1c8c8b99160c56836a8eaec087fc29ec 262 Gene3D G3DSA:3.90.550.10 4 251 7.1E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 SMART SM00382 366 509 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 SUPERFAMILY SSF55785 201 284 1.57E-5 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 SUPERFAMILY SSF46689 559 649 7.94E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Pfam PF00158 Sigma-54 interaction domain 346 513 6.2E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 630 650 2.3E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 613 630 2.3E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Gene3D G3DSA:3.30.450.20 228 334 2.4E-15 T 14-10-2018 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Gene3D G3DSA:1.10.8.60 517 583 2.4E-20 T 14-10-2018 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Pfam PF02954 Bacterial regulatory protein, Fis family 607 647 3.6E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Gene3D G3DSA:1.10.10.60 584 651 3.8E-15 T 14-10-2018 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 370 383 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 432 447 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 SUPERFAMILY SSF52540 345 588 4.99E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Gene3D G3DSA:3.30.450.40 11 204 2.4E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 Gene3D G3DSA:3.40.50.300 335 516 1.2E-65 T 14-10-2018 Tph_c01700 1399e3f92e1e1264aa881325c9aa3a96 651 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 559 568 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 Pfam PF00301 Rubredoxin 3 49 5.0E-23 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 SUPERFAMILY SSF57802 184 219 1.85E-10 T 14-10-2018 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 ProSitePatterns PS00202 Rubredoxin signature. 33 43 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 SUPERFAMILY SSF57802 1 55 2.02E-21 T 14-10-2018 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 PRINTS PR00163 Rubredoxin signature 33 49 2.0E-10 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 PRINTS PR00163 Rubredoxin signature 3 19 2.0E-10 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 Gene3D G3DSA:2.20.28.10 2 53 3.3E-26 T 14-10-2018 Tph_c23390 b3bdcb481e5dc1c0b5557bedf2a91832 223 Gene3D G3DSA:2.20.28.10 182 220 1.0E-13 T 14-10-2018 Tph_c17770 ca8f20ccdff8c6ebfeedf4f1c2acd57d 213 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 180 1.3E-36 T 14-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 Tph_c17770 ca8f20ccdff8c6ebfeedf4f1c2acd57d 213 Gene3D G3DSA:3.40.50.1000 6 203 1.2E-60 T 14-10-2018 IPR023214 HAD superfamily Tph_c17770 ca8f20ccdff8c6ebfeedf4f1c2acd57d 213 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 171 2.0E-29 T 14-10-2018 Tph_c17770 ca8f20ccdff8c6ebfeedf4f1c2acd57d 213 SUPERFAMILY SSF56784 1 208 8.54E-49 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c17770 ca8f20ccdff8c6ebfeedf4f1c2acd57d 213 Gene3D G3DSA:3.90.1470.20 14 130 1.2E-60 T 14-10-2018 Tph_c17770 ca8f20ccdff8c6ebfeedf4f1c2acd57d 213 Pfam PF06888 Putative Phosphatase 5 172 5.5E-15 T 14-10-2018 IPR016965 Phosphatase PHOSPHO-type GO:0016791 Tph_c25370 49203ff5ce38b27cd45fa09f9e531b5d 638 SMART SM00491 479 608 3.1E-34 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Tph_c25370 49203ff5ce38b27cd45fa09f9e531b5d 638 Gene3D G3DSA:3.40.50.300 446 635 1.6E-39 T 14-10-2018 Tph_c25370 49203ff5ce38b27cd45fa09f9e531b5d 638 SUPERFAMILY SSF52540 40 602 1.16E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25370 49203ff5ce38b27cd45fa09f9e531b5d 638 Pfam PF13307 Helicase C-terminal domain 466 621 9.6E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 Tph_c25370 49203ff5ce38b27cd45fa09f9e531b5d 638 Gene3D G3DSA:3.40.50.300 23 264 1.8E-38 T 14-10-2018 Tph_c01460 de2b10a632da07167a40c2698c0e4c23 390 SUPERFAMILY SSF53098 121 351 1.29E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c01460 de2b10a632da07167a40c2698c0e4c23 390 Pfam PF01609 Transposase DDE domain 109 350 2.5E-12 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c24950 41f37592d2dad36922d41961c0d0930f 516 PIRSF PIRSF002741 1 515 7.9E-106 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c24950 41f37592d2dad36922d41961c0d0930f 516 Gene3D G3DSA:3.10.105.10 264 486 1.6E-138 T 14-10-2018 Tph_c24950 41f37592d2dad36922d41961c0d0930f 516 Gene3D G3DSA:3.40.190.10 68 498 1.6E-138 T 14-10-2018 Tph_c24950 41f37592d2dad36922d41961c0d0930f 516 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 82 103 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Tph_c24950 41f37592d2dad36922d41961c0d0930f 516 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 436 5.2E-95 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c24950 41f37592d2dad36922d41961c0d0930f 516 SUPERFAMILY SSF53850 33 509 1.03E-132 T 14-10-2018 Tph_c22910 8934dc575a622c6d4cc74ce364f7c931 254 SUPERFAMILY SSF53098 44 241 7.59E-12 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c22910 8934dc575a622c6d4cc74ce364f7c931 254 Pfam PF01609 Transposase DDE domain 39 233 9.5E-17 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c23910 ab9f466515ffcdadc8c17a754d1dfe37 174 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 151 1.3E-26 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ Tph_c20810 45b2fc3d02b85c15264e0d5bed6cec94 310 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 23 262 4.8E-42 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 Tph_c20810 45b2fc3d02b85c15264e0d5bed6cec94 310 SUPERFAMILY SSF89550 21 279 2.35E-43 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c20810 45b2fc3d02b85c15264e0d5bed6cec94 310 Pfam PF02811 PHP domain 23 192 7.7E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tph_c20810 45b2fc3d02b85c15264e0d5bed6cec94 310 Gene3D G3DSA:3.20.20.140 22 284 3.1E-63 T 14-10-2018 Tph_c15480 148e4e9ad6c57b5d930a13f41379f11d 188 Gene3D G3DSA:1.10.1060.10 18 105 2.7E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c15480 148e4e9ad6c57b5d930a13f41379f11d 188 Pfam PF13187 4Fe-4S dicluster domain 30 88 1.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c15480 148e4e9ad6c57b5d930a13f41379f11d 188 SUPERFAMILY SSF46548 26 106 1.74E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 SMART SM00562 1 138 2.4E-97 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 1.2E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 1.2E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 1.2E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 1.2E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 1.2E-50 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 Gene3D G3DSA:3.30.70.141 1 149 1.4E-67 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.7E-61 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 SUPERFAMILY SSF54919 1 149 2.23E-64 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c26800 300f56e1f189dfd3d83a0971531a0b9d 149 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 38.586 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Tph_c06000 69d0497dc9b8f3c94d8e1677958a80cc 748 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 651 1.0E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tph_c06000 69d0497dc9b8f3c94d8e1677958a80cc 748 Pfam PF03717 Penicillin-binding Protein dimerisation domain 54 230 1.4E-53 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tph_c06000 69d0497dc9b8f3c94d8e1677958a80cc 748 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 10 656 1.0E-162 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Tph_c06000 69d0497dc9b8f3c94d8e1677958a80cc 748 Gene3D G3DSA:3.90.1310.30 47 243 2.7E-44 T 14-10-2018 Tph_c06000 69d0497dc9b8f3c94d8e1677958a80cc 748 SUPERFAMILY SSF56519 46 247 1.44E-51 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tph_c06000 69d0497dc9b8f3c94d8e1677958a80cc 748 SUPERFAMILY SSF56601 197 677 6.32E-93 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 Pfam PF03099 Biotin/lipoate A/B protein ligase family 46 154 6.0E-12 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 328 3.6E-25 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 SUPERFAMILY SSF82649 244 330 1.67E-22 T 14-10-2018 Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 Gene3D G3DSA:3.30.390.50 243 330 1.7E-25 T 14-10-2018 Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 Gene3D G3DSA:3.30.930.10 2 242 1.9E-88 T 14-10-2018 Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 SUPERFAMILY SSF55681 3 242 2.84E-86 T 14-10-2018 Tph_c17170 1031389cb6f19b95656f51cf0e90633b 334 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 317 7.1E-107 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 733 321.08 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Gene3D G3DSA:3.30.1330.10 39 187 1.9E-134 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Pfam PF02769 AIR synthase related protein, C-terminal domain 566 701 3.7E-20 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Pfam PF02769 AIR synthase related protein, C-terminal domain 197 346 7.1E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Gene3D G3DSA:3.90.650.10 24 351 1.9E-134 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Pfam PF00586 AIR synthase related protein, N-terminal domain 435 551 1.4E-26 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Pfam PF00586 AIR synthase related protein, N-terminal domain 82 184 5.3E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Gene3D G3DSA:3.90.650.10 560 732 4.0E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 PIRSF PIRSF001587 1 733 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 13 731 1.3E-294 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 SUPERFAMILY SSF55326 391 560 1.57E-59 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 Gene3D G3DSA:3.30.1330.10 378 554 6.4E-69 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 SUPERFAMILY SSF56042 195 420 6.13E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 SUPERFAMILY SSF56042 563 732 2.24E-42 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c08460 77fdb9308d93fef4d23b24f9ae620ce3 733 SUPERFAMILY SSF55326 9 189 9.42E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c04040 db67c9fd72d99775494fa1c243374d75 442 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 413 6.0E-93 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c04040 db67c9fd72d99775494fa1c243374d75 442 PIRSF PIRSF006603 1 442 9.9E-96 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c04040 db67c9fd72d99775494fa1c243374d75 442 Pfam PF01554 MatE 12 172 1.9E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c04040 db67c9fd72d99775494fa1c243374d75 442 Pfam PF01554 MatE 239 400 5.5E-33 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c07390 f483a03caf836ad7c520c71a59fef6f4 421 Gene3D G3DSA:1.10.443.10 207 401 2.4E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tph_c07390 f483a03caf836ad7c520c71a59fef6f4 421 SUPERFAMILY SSF56349 113 393 2.94E-38 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tph_c07390 f483a03caf836ad7c520c71a59fef6f4 421 Pfam PF00589 Phage integrase family 216 384 8.4E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tph_c07390 f483a03caf836ad7c520c71a59fef6f4 421 Gene3D G3DSA:1.10.150.130 8 100 3.4E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Tph_c12740 0584216af3e728cc2970bb2ac2021e76 218 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 36 160 3.3E-47 T 14-10-2018 IPR014202 Sporulation stage II, protein R Tph_c12740 0584216af3e728cc2970bb2ac2021e76 218 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 9 162 1.9E-53 T 14-10-2018 IPR014202 Sporulation stage II, protein R Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 Gene3D G3DSA:2.40.40.20 402 522 1.7E-39 T 14-10-2018 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 276 293 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 SUPERFAMILY SSF50692 381 521 3.73E-43 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 Gene3D G3DSA:3.40.228.10 1 184 8.0E-158 T 14-10-2018 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 519 1.2E-201 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 Pfam PF00384 Molybdopterin oxidoreductase 2 329 3.2E-70 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 Pfam PF01568 Molydopterin dinucleotide binding domain 412 516 1.5E-27 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 Gene3D G3DSA:3.40.50.740 185 371 8.0E-158 T 14-10-2018 Tph_c27290 2a11b7f13aa7d0828ab26446cf614f06 524 SUPERFAMILY SSF53706 1 414 7.85E-149 T 14-10-2018 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 SUPERFAMILY SSF53067 124 253 1.05E-39 T 14-10-2018 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 250 9.2E-78 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 Gene3D G3DSA:3.30.420.40 1 88 1.6E-32 T 14-10-2018 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 37.452 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 Pfam PF03309 Type III pantothenate kinase 2 206 3.6E-72 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 Gene3D G3DSA:3.30.420.40 89 254 2.8E-61 T 14-10-2018 Tph_c26590 9b9afe9bd5001d5515b32eb46be0db0c 254 SUPERFAMILY SSF53067 1 122 1.53E-37 T 14-10-2018 Tph_c05540 a22f211fdd0351f38410dc4f7b08f8b4 691 Gene3D G3DSA:3.40.50.300 299 465 8.8E-16 T 14-10-2018 Tph_c05540 a22f211fdd0351f38410dc4f7b08f8b4 691 SUPERFAMILY SSF52540 330 637 6.56E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05540 a22f211fdd0351f38410dc4f7b08f8b4 691 SMART SM00490 548 627 0.0057 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c05540 a22f211fdd0351f38410dc4f7b08f8b4 691 SMART SM00487 305 486 4.8E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c05540 a22f211fdd0351f38410dc4f7b08f8b4 691 Gene3D G3DSA:3.40.50.300 496 663 2.4E-14 T 14-10-2018 Tph_c05540 a22f211fdd0351f38410dc4f7b08f8b4 691 Pfam PF00271 Helicase conserved C-terminal domain 568 626 5.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c04230 bbc1f273387f1df8f7edd48279f27572 405 SUPERFAMILY SSF56796 15 400 2.22E-99 T 14-10-2018 Tph_c04230 bbc1f273387f1df8f7edd48279f27572 405 Gene3D G3DSA:1.20.1090.10 200 401 1.5E-43 T 14-10-2018 Tph_c04230 bbc1f273387f1df8f7edd48279f27572 405 Gene3D G3DSA:3.40.50.1970 2 199 1.7E-46 T 14-10-2018 Tph_c04230 bbc1f273387f1df8f7edd48279f27572 405 Pfam PF00465 Iron-containing alcohol dehydrogenase 21 377 1.3E-91 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 Gene3D G3DSA:1.20.58.760 321 495 4.8E-39 T 14-10-2018 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 100 238 1.7E-38 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 ProSitePatterns PS00674 AAA-protein family signature. 209 227 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 SUPERFAMILY SSF140990 321 488 1.7E-41 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 Pfam PF01434 Peptidase family M41 301 484 1.5E-31 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 Gene3D G3DSA:1.10.8.60 241 316 6.5E-25 T 14-10-2018 Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 SUPERFAMILY SSF52540 59 310 4.27E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 SMART SM00382 96 241 4.1E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c11550 536d2e3f39bf12b9222fa1ebf2f71b30 498 Gene3D G3DSA:3.40.50.300 53 240 9.9E-56 T 14-10-2018 Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 506 521 1.6E-7 T 14-10-2018 Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 73 95 1.6E-7 T 14-10-2018 Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 Gene3D G3DSA:3.50.50.60 72 544 4.3E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 SUPERFAMILY SSF51905 60 549 1.99E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 Pfam PF00890 FAD binding domain 73 519 5.6E-51 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 SUPERFAMILY SSF56425 334 490 1.91E-25 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c01160 3f208ad1dd8ada40355bfc2114ee23ec 552 Gene3D G3DSA:3.90.700.10 328 480 4.3E-111 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 Gene3D G3DSA:3.30.420.40 203 348 6.1E-35 T 14-10-2018 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 Gene3D G3DSA:3.90.640.10 241 294 6.1E-35 T 14-10-2018 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 SMART SM00842 7 202 6.8E-46 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 SUPERFAMILY SSF53067 209 380 8.91E-23 T 14-10-2018 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 Gene3D G3DSA:3.30.420.40 10 349 6.1E-35 T 14-10-2018 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 SUPERFAMILY SSF53067 5 200 1.81E-23 T 14-10-2018 Tph_c15240 06c6ae2a130880ef6bed6a0d453febb9 735 Gene3D G3DSA:3.30.1490.110 82 175 6.1E-35 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 Gene3D G3DSA:3.40.710.10 255 448 2.4E-122 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 SUPERFAMILY SSF54184 617 674 3.01E-6 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 SUPERFAMILY SSF54184 553 606 3.01E-9 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 SUPERFAMILY SSF56519 23 193 1.7E-42 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tph_c12580 201935649970900174e973e305b33520 684 Pfam PF00905 Penicillin binding protein transpeptidase domain 220 527 9.1E-84 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tph_c12580 201935649970900174e973e305b33520 684 SUPERFAMILY SSF56601 144 542 9.9E-109 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c12580 201935649970900174e973e305b33520 684 Gene3D G3DSA:3.30.10.20 618 674 1.5E-8 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 Gene3D G3DSA:3.30.450.330 195 532 2.4E-122 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 SMART SM00740 613 676 0.11 T 14-10-2018 IPR005543 PASTA domain Tph_c12580 201935649970900174e973e305b33520 684 SMART SM00740 548 608 1.2E-7 T 14-10-2018 IPR005543 PASTA domain Tph_c12580 201935649970900174e973e305b33520 684 Gene3D G3DSA:3.30.10.20 547 606 1.4E-5 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 Gene3D G3DSA:3.90.1310.30 20 193 1.8E-44 T 14-10-2018 Tph_c12580 201935649970900174e973e305b33520 684 Pfam PF03793 PASTA domain 553 604 9.8E-9 T 14-10-2018 IPR005543 PASTA domain Tph_c12580 201935649970900174e973e305b33520 684 Pfam PF03793 PASTA domain 618 673 1.7E-8 T 14-10-2018 IPR005543 PASTA domain Tph_c12580 201935649970900174e973e305b33520 684 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 1 604 2.7E-226 T 14-10-2018 IPR011927 Stage V sporulation protein D Tph_c12580 201935649970900174e973e305b33520 684 Pfam PF03717 Penicillin-binding Protein dimerisation domain 29 177 6.7E-20 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tph_c18530 f9ff5b85ac8f3548831c17316690523f 183 Pfam PF00583 Acetyltransferase (GNAT) family 33 141 2.5E-22 T 14-10-2018 IPR000182 GNAT domain Tph_c18530 f9ff5b85ac8f3548831c17316690523f 183 Gene3D G3DSA:3.40.630.30 22 181 1.2E-46 T 14-10-2018 Tph_c18530 f9ff5b85ac8f3548831c17316690523f 183 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 31 161 2.9E-46 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Tph_c18530 f9ff5b85ac8f3548831c17316690523f 183 SUPERFAMILY SSF55729 24 165 1.15E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tph_c06800 fcd81dd592d8facf591027fd71bc420b 331 Gene3D G3DSA:3.20.20.480 13 331 6.6E-97 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c06800 fcd81dd592d8facf591027fd71bc420b 331 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 21 330 1.9E-60 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c25090 729fa5072311e10143b1d2cc0eac8397 272 SUPERFAMILY SSF53335 25 265 4.26E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c25090 729fa5072311e10143b1d2cc0eac8397 272 Gene3D G3DSA:3.40.50.150 30 268 4.8E-17 T 14-10-2018 Tph_c25090 729fa5072311e10143b1d2cc0eac8397 272 Pfam PF13649 Methyltransferase domain 67 154 9.4E-10 T 14-10-2018 Tph_c11970 91312b8f886b8ff1838925237286c70f 371 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 3.5E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c11970 91312b8f886b8ff1838925237286c70f 371 Pfam PF01548 Transposase 5 165 1.9E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c20990 32cb6cc323ec367cc6a939bc6a9dcb4a 230 Pfam PF03591 AzlC protein 15 155 4.1E-42 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease Tph_c28180 7070c5c37d7256c043b10fc87e00015b 336 Gene3D G3DSA:1.10.260.150 63 325 7.7E-79 T 14-10-2018 Tph_c28180 7070c5c37d7256c043b10fc87e00015b 336 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 90 234 8.4E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Tph_c28180 7070c5c37d7256c043b10fc87e00015b 336 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 91 234 6.2E-44 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Tph_c03460 d53786f12ba47eaca78a738a93d3b367 256 SUPERFAMILY SSF56317 1 250 1.83E-42 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c03460 d53786f12ba47eaca78a738a93d3b367 256 Gene3D G3DSA:3.60.110.10 1 255 5.7E-44 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c03460 d53786f12ba47eaca78a738a93d3b367 256 Pfam PF00795 Carbon-nitrogen hydrolase 15 216 1.8E-22 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tph_c06950 c3d3d04ee8d3e0e8ab4102655fe840b4 285 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 59 280 5.5E-78 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Tph_c06950 c3d3d04ee8d3e0e8ab4102655fe840b4 285 Gene3D G3DSA:3.40.50.11240 102 281 6.2E-63 T 14-10-2018 Tph_c06950 c3d3d04ee8d3e0e8ab4102655fe840b4 285 Gene3D G3DSA:1.10.30.40 50 100 1.7E-14 T 14-10-2018 Tph_c06950 c3d3d04ee8d3e0e8ab4102655fe840b4 285 PIRSF PIRSF018982 49 284 1.7E-83 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 SUPERFAMILY SSF81336 71 216 3.79E-34 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 ProSitePatterns PS00449 ATP synthase a subunit signature. 162 171 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 219 2.6E-37 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 PRINTS PR00123 ATP synthase A subunit signature 203 218 1.8E-16 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 PRINTS PR00123 ATP synthase A subunit signature 78 94 1.8E-16 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 PRINTS PR00123 ATP synthase A subunit signature 159 181 1.8E-16 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 Gene3D G3DSA:1.20.120.220 70 224 4.0E-44 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 223 15.063 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27430 ecf74f45e624b51f81761f70f94d7ae0 224 Pfam PF00119 ATP synthase A chain 21 216 5.0E-54 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 18 219 36.057 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 133 214 1.2E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 128 214 21.825 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Gene3D G3DSA:3.10.20.400 8 106 1.6E-39 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 16 119 30.742 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Gene3D G3DSA:1.10.287.1080 128 219 6.1E-31 T 14-10-2018 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 42 114 1.2E-32 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 65 114 3.0E-15 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 SUPERFAMILY SSF101386 130 218 7.29E-27 T 14-10-2018 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 134 217 1.2E-19 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 Tph_c08880 ff07b1b2553dcc34f3a016a6c195c2b3 219 SUPERFAMILY SSF141734 16 118 2.09E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 Gene3D G3DSA:3.10.350.10 43 103 1.0E-13 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 Gene3D G3DSA:3.10.350.10 104 155 8.0E-14 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 Pfam PF01551 Peptidase family M23 191 285 3.9E-31 T 14-10-2018 IPR016047 Peptidase M23 Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 Gene3D G3DSA:2.70.70.10 156 290 2.8E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 SMART SM00257 106 150 1.1E-12 T 14-10-2018 IPR018392 LysM domain Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 SMART SM00257 56 100 8.1E-12 T 14-10-2018 IPR018392 LysM domain Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 SUPERFAMILY SSF51261 57 289 3.61E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 Pfam PF01476 LysM domain 107 150 1.9E-12 T 14-10-2018 IPR018392 LysM domain Tph_c27800 79eadc58fe05df056dcc1d0ddf004b4e 290 Pfam PF01476 LysM domain 57 100 1.1E-13 T 14-10-2018 IPR018392 LysM domain Tph_c05110 41ba26fead499c72a06915995d84d1e5 382 Gene3D G3DSA:1.10.287.950 40 353 1.8E-22 T 14-10-2018 Tph_c05110 41ba26fead499c72a06915995d84d1e5 382 SMART SM00283 63 315 0.01 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c05110 41ba26fead499c72a06915995d84d1e5 382 SUPERFAMILY SSF58104 60 323 1.7E-22 T 14-10-2018 Tph_c05110 41ba26fead499c72a06915995d84d1e5 382 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 170 272 3.1E-15 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c22720 2eb09c7c3769073cd15defbe81768594 162 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 125 135 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site Tph_c22720 2eb09c7c3769073cd15defbe81768594 162 SUPERFAMILY SSF55486 18 156 1.22E-38 T 14-10-2018 Tph_c22720 2eb09c7c3769073cd15defbe81768594 162 Pfam PF02130 Uncharacterized protein family UPF0054 14 156 6.9E-44 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tph_c22720 2eb09c7c3769073cd15defbe81768594 162 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 9 162 22.426 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tph_c22720 2eb09c7c3769073cd15defbe81768594 162 Gene3D G3DSA:3.40.390.30 2 158 3.0E-45 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Tph_c22720 2eb09c7c3769073cd15defbe81768594 162 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 156 1.5E-35 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Tph_c19510 72a0f34b51ed146b80d46641cf8146cc 252 Gene3D G3DSA:3.60.15.10 3 237 3.0E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c19510 72a0f34b51ed146b80d46641cf8146cc 252 SUPERFAMILY SSF56281 1 239 1.4E-29 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c19510 72a0f34b51ed146b80d46641cf8146cc 252 SMART SM00849 22 233 5.9E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c19510 72a0f34b51ed146b80d46641cf8146cc 252 Pfam PF00753 Metallo-beta-lactamase superfamily 22 207 3.0E-18 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Gene3D G3DSA:3.40.50.300 1 226 9.9E-59 T 14-10-2018 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 SUPERFAMILY SSF75553 483 683 2.48E-40 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 SUPERFAMILY SSF52540 1 1186 1.45E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Gene3D G3DSA:1.20.1060.20 499 684 2.5E-46 T 14-10-2018 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 SMART SM00968 525 643 1.4E-25 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1185 21.571 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Pfam PF06470 SMC proteins Flexible Hinge Domain 533 641 7.6E-23 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1176 2.6E-71 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1183 4.0E-286 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Gene3D G3DSA:3.30.70.1620 585 672 2.5E-46 T 14-10-2018 Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 PIRSF PIRSF005719 1 1192 7.2E-272 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Tph_c10160 63ecb33531edc12e275d4d0d5367be55 1197 Gene3D G3DSA:3.40.50.300 938 1197 2.4E-44 T 14-10-2018 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 3 206 1.8E-62 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 Pfam PF03315 Serine dehydratase beta chain 5 99 1.5E-14 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 Gene3D G3DSA:3.30.1330.90 13 137 5.3E-21 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 Gene3D G3DSA:3.30.70.260 148 219 4.8E-18 T 14-10-2018 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 SUPERFAMILY SSF143548 19 137 1.44E-28 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 SUPERFAMILY SSF55021 148 218 5.66E-17 T 14-10-2018 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 PIRSF PIRSF036692 1 219 2.6E-78 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tph_c17150 f54c0792bebe0d6c8521fb57d0aa176d 219 Pfam PF01842 ACT domain 149 211 4.7E-9 T 14-10-2018 IPR002912 ACT domain Tph_c14020 523c9d333eea2ed60ee47796a049ed23 167 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 2.0E-58 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14020 523c9d333eea2ed60ee47796a049ed23 167 Gene3D G3DSA:3.40.50.960 2 154 9.7E-62 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14020 523c9d333eea2ed60ee47796a049ed23 167 SUPERFAMILY SSF52121 5 155 2.75E-61 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14020 523c9d333eea2ed60ee47796a049ed23 167 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 153 30.677 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c14020 523c9d333eea2ed60ee47796a049ed23 167 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 1.7E-52 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 Pfam PF00482 Type II secretion system (T2SS), protein F 272 394 2.0E-29 T 14-10-2018 IPR018076 Type II secretion system F domain Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 Pfam PF00482 Type II secretion system (T2SS), protein F 69 192 3.5E-31 T 14-10-2018 IPR018076 Type II secretion system F domain Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 2.2E-17 T 14-10-2018 IPR003004 GspF/PilC family Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 2.2E-17 T 14-10-2018 IPR003004 GspF/PilC family Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 2.2E-17 T 14-10-2018 IPR003004 GspF/PilC family Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 2.2E-17 T 14-10-2018 IPR003004 GspF/PilC family Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 Gene3D G3DSA:1.20.81.30 255 366 4.8E-30 T 14-10-2018 Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 Gene3D G3DSA:1.20.81.30 56 174 4.9E-33 T 14-10-2018 Tph_c16630 cb606a7eb68ecf3412ed693ed77a4b77 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 164 192 - T 14-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 Tph_c23130 bd702d698f0af898b9b4d4173291e5c6 102 Pfam PF05135 Phage gp6-like head-tail connector protein 1 72 1.5E-12 T 14-10-2018 IPR021146 Phage gp6-like head-tail connector protein Tph_c23130 bd702d698f0af898b9b4d4173291e5c6 102 Gene3D G3DSA:1.10.3230.30 2 102 1.4E-10 T 14-10-2018 Tph_c26380 c206a2e01bad1bf98053d3c54f02982f 211 PIRSF PIRSF000709 2 192 4.4E-18 T 14-10-2018 Tph_c26380 c206a2e01bad1bf98053d3c54f02982f 211 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Tph_c26380 c206a2e01bad1bf98053d3c54f02982f 211 Gene3D G3DSA:3.40.50.1240 1 206 1.2E-71 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tph_c26380 c206a2e01bad1bf98053d3c54f02982f 211 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 196 8.0E-66 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tph_c26380 c206a2e01bad1bf98053d3c54f02982f 211 SUPERFAMILY SSF53254 1 201 8.44E-66 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Tph_c26380 c206a2e01bad1bf98053d3c54f02982f 211 SMART SM00855 2 156 2.0E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 10 241 36.471 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 SUPERFAMILY SSF51366 10 239 8.25E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 Gene3D G3DSA:3.20.20.70 8 248 3.3E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 SMART SM00934 12 236 2.1E-82 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 64 77 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 13 236 2.1E-55 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14420 741ed69478a9c499349c24dc3c142a67 248 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 12 236 4.7E-41 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 SUPERFAMILY SSF54862 80 212 2.8E-27 T 14-10-2018 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 Gene3D G3DSA:3.10.20.740 4 127 2.1E-38 T 14-10-2018 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 SMART SM00929 87 129 0.0054 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 Gene3D G3DSA:3.30.70.20 131 212 2.2E-19 T 14-10-2018 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 80 2.1E-20 T 14-10-2018 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 119 4.2E-11 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c14870 74f398df07787e11cb9c22db34c9eb96 213 SUPERFAMILY SSF54292 5 122 3.46E-33 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c05030 67e7531cfa1ddb8473ff2b523cc5e3b1 103 Gene3D G3DSA:1.10.287.950 2 103 3.0E-7 T 14-10-2018 Tph_c05030 67e7531cfa1ddb8473ff2b523cc5e3b1 103 SUPERFAMILY SSF58104 20 101 4.05E-8 T 14-10-2018 Tph_c06060 8984f36f063a793b7b6f969251bca63f 619 SMART SM00729 263 486 2.2E-28 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c06060 8984f36f063a793b7b6f969251bca63f 619 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 10 604 4.2E-239 T 14-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM Tph_c06060 8984f36f063a793b7b6f969251bca63f 619 SUPERFAMILY SSF102114 229 593 1.7E-49 T 14-10-2018 Tph_c06060 8984f36f063a793b7b6f969251bca63f 619 Pfam PF04055 Radical SAM superfamily 267 431 1.7E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c06060 8984f36f063a793b7b6f969251bca63f 619 Gene3D G3DSA:3.80.30.20 262 444 1.2E-20 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c15270 81194095c2967fed80ad9bcef9456562 437 Gene3D G3DSA:3.90.1150.10 12 426 8.5E-178 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c15270 81194095c2967fed80ad9bcef9456562 437 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 8 432 103.859 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Tph_c15270 81194095c2967fed80ad9bcef9456562 437 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c15270 81194095c2967fed80ad9bcef9456562 437 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 9 431 1.4E-192 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Tph_c15270 81194095c2967fed80ad9bcef9456562 437 SUPERFAMILY SSF53383 5 431 1.99E-131 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c15270 81194095c2967fed80ad9bcef9456562 437 Gene3D G3DSA:3.40.640.10 74 321 8.5E-178 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c15270 81194095c2967fed80ad9bcef9456562 437 Pfam PF00202 Aminotransferase class-III 34 397 1.3E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c04250 6689c27d2d21f20653dbec91c73a0c2c 138 Pfam PF01695 IstB-like ATP binding protein 15 138 3.7E-32 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c04250 6689c27d2d21f20653dbec91c73a0c2c 138 SUPERFAMILY SSF52540 16 128 2.08E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04250 6689c27d2d21f20653dbec91c73a0c2c 138 Gene3D G3DSA:3.40.50.300 7 138 1.8E-20 T 14-10-2018 Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 Gene3D G3DSA:3.40.50.740 146 330 2.7E-94 T 14-10-2018 Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 SUPERFAMILY SSF53706 2 400 8.51E-94 T 14-10-2018 Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 Gene3D G3DSA:2.40.40.20 371 524 2.9E-42 T 14-10-2018 Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 Pfam PF00384 Molybdopterin oxidoreductase 3 291 1.7E-30 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 Gene3D G3DSA:3.40.228.10 1 145 2.7E-94 T 14-10-2018 Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 SUPERFAMILY SSF50692 354 524 3.62E-37 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c01710 dfdc2fbb47c0f6199ff067404d0bdb8f 525 Pfam PF01568 Molydopterin dinucleotide binding domain 400 480 4.2E-17 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c09260 de162c5d93961e75a46d93b1adf24fb9 328 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 233 3.8E-13 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Tph_c09260 de162c5d93961e75a46d93b1adf24fb9 328 Gene3D G3DSA:3.60.21.10 1 248 4.8E-29 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c09260 de162c5d93961e75a46d93b1adf24fb9 328 SUPERFAMILY SSF56300 1 236 8.02E-31 T 14-10-2018 Tph_c09230 5232161ea064df86ab31a1b772a8b810 466 Pfam PF01979 Amidohydrolase family 314 437 1.7E-5 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c09230 5232161ea064df86ab31a1b772a8b810 466 Gene3D G3DSA:2.30.40.10 401 437 2.1E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c09230 5232161ea064df86ab31a1b772a8b810 466 Gene3D G3DSA:3.20.20.140 388 400 2.1E-5 T 14-10-2018 Tph_c09230 5232161ea064df86ab31a1b772a8b810 466 SUPERFAMILY SSF51556 97 405 6.8E-6 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c09230 5232161ea064df86ab31a1b772a8b810 466 Gene3D G3DSA:2.30.40.10 24 121 5.0E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c09230 5232161ea064df86ab31a1b772a8b810 466 SUPERFAMILY SSF51338 11 424 6.18E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Tph_c19980 52b7708949dbf55d7e730b4c3388ded1 160 Pfam PF11848 Domain of unknown function (DUF3368) 113 156 1.6E-13 T 14-10-2018 IPR021799 Protein of unknown function DUF3368 Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 Pfam PF01551 Peptidase family M23 442 536 4.9E-32 T 14-10-2018 IPR016047 Peptidase M23 Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 SUPERFAMILY SSF54106 276 321 7.85E-9 T 14-10-2018 Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 Pfam PF01476 LysM domain 279 321 1.0E-10 T 14-10-2018 IPR018392 LysM domain Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 Gene3D G3DSA:3.10.350.10 277 320 3.6E-14 T 14-10-2018 IPR036779 LysM domain superfamily Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 Pfam PF07501 G5 domain 334 407 2.4E-18 T 14-10-2018 IPR011098 G5 domain Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 Gene3D G3DSA:2.70.70.10 404 541 4.5E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 SMART SM01208 330 408 4.8E-23 T 14-10-2018 IPR011098 G5 domain Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 SMART SM00257 278 322 8.0E-13 T 14-10-2018 IPR018392 LysM domain Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 SUPERFAMILY SSF51261 414 540 9.94E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c28100 51fe78064a2ad00c488e6045c15680c7 541 Gene3D G3DSA:2.20.230.10 321 403 8.2E-15 T 14-10-2018 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 SUPERFAMILY SSF54631 270 364 2.13E-8 T 14-10-2018 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 Gene3D G3DSA:3.40.50.300 4 251 7.5E-73 T 14-10-2018 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 Pfam PF00005 ABC transporter 24 168 5.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 SUPERFAMILY SSF52540 7 243 4.78E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 Gene3D G3DSA:3.10.580.10 252 368 2.3E-7 T 14-10-2018 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 17 365 2.8E-104 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 Tph_c20180 7b23303e31cb03cc9d67ac9fad3912cf 368 SMART SM00382 32 218 4.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 Pfam PF08378 Nuclease-related domain 195 287 1.5E-11 T 14-10-2018 IPR011528 Nuclease-related domain, NERD Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 SMART SM00220 655 903 6.3E-16 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 SMART SM00220 362 627 7.9E-10 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 SUPERFAMILY SSF52540 961 1101 1.15E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 778 790 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 SUPERFAMILY SSF56112 650 906 6.47E-40 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 SUPERFAMILY SSF56112 407 622 1.28E-34 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 Gene3D G3DSA:1.10.510.10 647 951 8.2E-39 T 14-10-2018 Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 Gene3D G3DSA:1.10.510.10 396 625 5.5E-32 T 14-10-2018 Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 Pfam PF00069 Protein kinase domain 411 577 3.1E-24 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c16990 2e613c0358319c6890e8c68db754f40e 1502 Pfam PF00069 Protein kinase domain 655 856 6.5E-28 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Tph_c18210 942329c4e36e1ba627342defa653d4d1 187 Pfam PF00857 Isochorismatase family 5 168 3.6E-47 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Tph_c18210 942329c4e36e1ba627342defa653d4d1 187 PRINTS PR01398 Isochorismatase signature 83 105 6.1E-6 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 Tph_c18210 942329c4e36e1ba627342defa653d4d1 187 PRINTS PR01398 Isochorismatase signature 38 55 6.1E-6 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 Tph_c18210 942329c4e36e1ba627342defa653d4d1 187 PRINTS PR01398 Isochorismatase signature 139 157 6.1E-6 T 14-10-2018 IPR016291 Isochorismatase GO:0008908 Tph_c18210 942329c4e36e1ba627342defa653d4d1 187 SUPERFAMILY SSF52499 4 172 5.1E-61 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tph_c18210 942329c4e36e1ba627342defa653d4d1 187 Gene3D G3DSA:3.40.50.850 2 184 2.4E-62 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tph_c04710 354e1e06b757f6ca0524fb7429a80c85 182 Pfam PF03358 NADPH-dependent FMN reductase 1 135 7.5E-30 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Tph_c04710 354e1e06b757f6ca0524fb7429a80c85 182 SUPERFAMILY SSF52218 1 181 4.97E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c04710 354e1e06b757f6ca0524fb7429a80c85 182 Gene3D G3DSA:3.40.50.360 1 180 4.2E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c14510 d5572b32c60e481509e5267b6816fc57 356 Gene3D G3DSA:1.10.3210.10 2 290 1.7E-65 T 14-10-2018 Tph_c14510 d5572b32c60e481509e5267b6816fc57 356 TIGRFAM TIGR00277 HDIG: HDIG domain 124 217 3.6E-8 T 14-10-2018 IPR006675 HDIG domain Tph_c14510 d5572b32c60e481509e5267b6816fc57 356 SMART SM00471 123 259 7.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c14510 d5572b32c60e481509e5267b6816fc57 356 SUPERFAMILY SSF109604 123 285 5.76E-24 T 14-10-2018 Tph_c14510 d5572b32c60e481509e5267b6816fc57 356 Pfam PF01966 HD domain 128 247 2.3E-13 T 14-10-2018 IPR006674 HD domain Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.7E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 PRINTS PR00069 Aldo-keto reductase signature 128 145 1.7E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 PRINTS PR00069 Aldo-keto reductase signature 94 112 1.7E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 Pfam PF12838 4Fe-4S dicluster domain 268 310 7.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 Gene3D G3DSA:3.20.20.100 1 245 1.6E-42 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 SUPERFAMILY SSF51430 1 245 2.23E-40 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 298 309 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 SUPERFAMILY SSF54862 263 313 1.55E-14 T 14-10-2018 Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 Pfam PF00248 Aldo/keto reductase family 15 208 3.8E-23 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Tph_c16920 ccbda4d9ff08833a78c185755afc1bac 316 Gene3D G3DSA:3.30.70.20 256 315 1.9E-10 T 14-10-2018 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 11 94 28.541 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 11 91 3.4E-40 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 44 58 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 PRINTS PR00063 Ribosomal protein L27 signature 14 38 4.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 PRINTS PR00063 Ribosomal protein L27 signature 39 63 4.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 PRINTS PR00063 Ribosomal protein L27 signature 64 88 4.5E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 SUPERFAMILY SSF110324 12 93 1.64E-34 T 14-10-2018 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 Gene3D G3DSA:2.40.50.100 31 96 1.2E-28 T 14-10-2018 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 38 79 2.0E-14 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c21580 ee7ed88c2d05b3d8ffccbefb344faffd 96 Pfam PF01016 Ribosomal L27 protein 12 91 1.4E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26870 35bf371bf5dddc32b43dc9e2332f7917 316 Pfam PF00704 Glycosyl hydrolases family 18 70 307 1.5E-19 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Tph_c26870 35bf371bf5dddc32b43dc9e2332f7917 316 Gene3D G3DSA:3.20.20.80 36 313 1.5E-76 T 14-10-2018 Tph_c26870 35bf371bf5dddc32b43dc9e2332f7917 316 SUPERFAMILY SSF51445 34 315 7.38E-35 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c26870 35bf371bf5dddc32b43dc9e2332f7917 316 SMART SM00636 15 308 2.7E-7 T 14-10-2018 IPR011583 Chitinase II GO:0008061 Tph_c26870 35bf371bf5dddc32b43dc9e2332f7917 316 Gene3D G3DSA:3.10.50.10 225 279 1.5E-76 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily Tph_c09020 974ca82a30305a8ef9eb6e956b3f639c 166 Pfam PF00694 Aconitase C-terminal domain 43 101 2.4E-19 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Tph_c09020 974ca82a30305a8ef9eb6e956b3f639c 166 Gene3D G3DSA:3.20.19.10 1 163 2.1E-53 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Tph_c09020 974ca82a30305a8ef9eb6e956b3f639c 166 Hamap MF_01032 Methanogen homoaconitase small subunit [hacB]. 3 162 36.589 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tph_c09020 974ca82a30305a8ef9eb6e956b3f639c 166 SUPERFAMILY SSF52016 3 161 1.77E-45 T 14-10-2018 Tph_c09020 974ca82a30305a8ef9eb6e956b3f639c 166 TIGRFAM TIGR02087 LEUD_arch: 3-isopropylmalate dehydratase, small subunit 5 159 1.8E-61 T 14-10-2018 IPR011827 Hydrolyase LeuD/HacB/DmdB GO:0016836 KEGG: 00290+4.2.1.33 Tph_c11440 17c361c2c4827818fa8fc9bedda190dd 194 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 7 192 4.5E-86 T 14-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B Tph_c11440 17c361c2c4827818fa8fc9bedda190dd 194 PIRSF PIRSF001390 1 194 1.0E-92 T 14-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B Tph_c11440 17c361c2c4827818fa8fc9bedda190dd 194 Pfam PF02441 Flavoprotein 7 147 1.2E-18 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tph_c11440 17c361c2c4827818fa8fc9bedda190dd 194 SUPERFAMILY SSF52507 7 191 3.14E-34 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c11440 17c361c2c4827818fa8fc9bedda190dd 194 Gene3D G3DSA:3.40.50.1950 1 194 2.3E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c28940 25043f22d7b3deb94f934a7ab35d2588 562 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 378 454 1.1E-7 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 Pfam PF01455 HupF/HypC family 1 65 3.8E-27 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 71 3.2E-25 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 1.4E-12 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 1.4E-12 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 38 54 1.4E-12 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 Gene3D G3DSA:2.40.50.970 1 73 4.2E-30 T 14-10-2018 IPR037254 HupF/HypC superfamily Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 SUPERFAMILY SSF159127 1 72 4.32E-25 T 14-10-2018 IPR037254 HupF/HypC superfamily Tph_c09190 f52ae6882492449fd5e414fd131f4bb2 73 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 14-10-2018 IPR019812 Hydrogenase assembly chaperone, conserved site Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 Pfam PF12838 4Fe-4S dicluster domain 161 206 1.4E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 SUPERFAMILY SSF54862 76 180 1.59E-12 T 14-10-2018 Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 SUPERFAMILY SSF54292 2 99 6.51E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 77 2.7E-17 T 14-10-2018 Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 Gene3D G3DSA:3.10.20.740 1 107 4.4E-28 T 14-10-2018 Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 Gene3D G3DSA:3.30.70.20 108 181 4.3E-10 T 14-10-2018 Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 162 173 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c04220 90b3ed9e0619714440a99231aae99bf9 247 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 30 47 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21710 8c736adfe5e74dd9b6d63bfe11962c85 176 Gene3D G3DSA:3.40.50.360 2 174 1.0E-60 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c21710 8c736adfe5e74dd9b6d63bfe11962c85 176 Pfam PF12682 Flavodoxin 29 171 1.3E-27 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 Tph_c21710 8c736adfe5e74dd9b6d63bfe11962c85 176 SUPERFAMILY SSF52218 5 138 3.82E-20 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c22590 a8f84fc2e9fda8f7467822c5eb99e40a 98 ProDom PD050957 AF2391 PREDICTED 1 33 4.0E-8 T 14-10-2018 Tph_c22590 a8f84fc2e9fda8f7467822c5eb99e40a 98 Pfam PF17253 Family of unknown function (DUF5320) 1 92 1.1E-31 T 14-10-2018 IPR035205 Protein of unknown function DUF5320 Tph_c09250 75642bdf059067b1751c047393c198db 616 SUPERFAMILY SSF52540 154 524 6.32E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09250 75642bdf059067b1751c047393c198db 616 Gene3D G3DSA:3.40.50.300 151 322 2.6E-10 T 14-10-2018 Tph_c09250 75642bdf059067b1751c047393c198db 616 Gene3D G3DSA:3.40.50.300 361 534 6.5E-34 T 14-10-2018 Tph_c09250 75642bdf059067b1751c047393c198db 616 Pfam PF01935 Domain of unknown function DUF87 173 355 5.0E-15 T 14-10-2018 IPR002789 Helicase HerA, central domain Tph_c02470 cfd5b467c93f89b688ef4baee212ba70 135 SUPERFAMILY SSF88723 1 121 4.21E-29 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c02470 cfd5b467c93f89b688ef4baee212ba70 135 Gene3D G3DSA:3.40.50.1010 1 129 9.8E-31 T 14-10-2018 Tph_c02470 cfd5b467c93f89b688ef4baee212ba70 135 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 125 11.783 T 14-10-2018 IPR022907 VapC family GO:0004540 Tph_c02470 cfd5b467c93f89b688ef4baee212ba70 135 Pfam PF01850 PIN domain 4 121 1.1E-18 T 14-10-2018 IPR002716 PIN domain Tph_c05570 cf21140cefbe540094e789eb870ca938 170 Gene3D G3DSA:3.30.460.10 75 170 1.4E-15 T 14-10-2018 Tph_c05570 cf21140cefbe540094e789eb870ca938 170 PIRSF PIRSF020217 57 170 1.4E-28 T 14-10-2018 IPR024700 Uncharacterised conserved protein, UCP020217 Tph_c05570 cf21140cefbe540094e789eb870ca938 170 SUPERFAMILY SSF81301 78 170 1.91E-16 T 14-10-2018 Tph_c05570 cf21140cefbe540094e789eb870ca938 170 Pfam PF01909 Nucleotidyltransferase domain 87 165 3.2E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c03740 8c09b86e6ab02e209efa8901c7863669 169 SUPERFAMILY SSF55469 1 169 2.75E-53 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tph_c03740 8c09b86e6ab02e209efa8901c7863669 169 Pfam PF00881 Nitroreductase family 68 148 9.6E-11 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tph_c03740 8c09b86e6ab02e209efa8901c7863669 169 Pfam PF00881 Nitroreductase family 7 59 8.3E-18 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tph_c03740 8c09b86e6ab02e209efa8901c7863669 169 Gene3D G3DSA:3.40.109.10 1 169 7.6E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 SUPERFAMILY SSF53335 4 269 2.61E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 9 244 2.2E-19 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 Gene3D G3DSA:1.10.1020.10 64 163 5.9E-39 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 PIRSF PIRSF000398 1 273 3.4E-56 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 57 70 1.5E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 188 200 1.5E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 34 48 1.5E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 9 25 1.5E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07930 b61db285fbb4d681373e6b851d790eb4 285 Gene3D G3DSA:3.40.50.150 7 245 5.9E-39 T 14-10-2018 Tph_c10200 cbc7f593ddb4ed471e5cd04bcff1fa6d 233 Gene3D G3DSA:3.40.225.10 1 215 8.6E-74 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Tph_c10200 cbc7f593ddb4ed471e5cd04bcff1fa6d 233 SUPERFAMILY SSF53639 3 208 3.53E-63 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Tph_c10200 cbc7f593ddb4ed471e5cd04bcff1fa6d 233 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 184 2.2E-51 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Tph_c10200 cbc7f593ddb4ed471e5cd04bcff1fa6d 233 SMART SM01007 8 185 3.4E-66 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 Pfam PF01565 FAD binding domain 40 179 1.3E-44 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 SUPERFAMILY SSF55103 219 459 4.91E-75 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 Gene3D G3DSA:1.10.45.10 417 457 4.9E-12 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 215 456 1.9E-76 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 SUPERFAMILY SSF56176 4 216 7.94E-76 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 Gene3D G3DSA:3.30.465.40 2 236 7.8E-82 T 14-10-2018 Tph_c10350 a7a24798f1867094c74ffe28a18b29d8 461 Gene3D G3DSA:3.30.70.2740 335 416 2.9E-17 T 14-10-2018 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 PIRSF PIRSF001529 1 424 7.2E-181 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 Gene3D G3DSA:3.30.930.10 105 424 2.2E-123 T 14-10-2018 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 Gene3D G3DSA:1.10.287.40 1 104 1.4E-26 T 14-10-2018 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 SUPERFAMILY SSF55681 116 421 1.16E-99 T 14-10-2018 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 42.753 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 3.8E-167 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 9.2E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 9.2E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 9.2E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 9.2E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 9.2E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 SUPERFAMILY SSF46589 1 112 1.31E-31 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 2.3E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c00180 aa6611c09cc0b3c044300592ff168f0e 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 3.0E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Tph_c27340 fa22df0bfa765f356686f95e9aafc546 230 Gene3D G3DSA:1.10.3720.10 3 228 8.2E-34 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c27340 fa22df0bfa765f356686f95e9aafc546 230 SUPERFAMILY SSF161098 11 219 1.44E-36 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c27340 fa22df0bfa765f356686f95e9aafc546 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 225 8.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c27210 6ffe62bfac2943c808af140d044c7905 134 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.0E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27210 6ffe62bfac2943c808af140d044c7905 134 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.0E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27210 6ffe62bfac2943c808af140d044c7905 134 SUPERFAMILY SSF46785 9 83 1.86E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c27210 6ffe62bfac2943c808af140d044c7905 134 Gene3D G3DSA:1.10.10.10 12 130 1.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c27210 6ffe62bfac2943c808af140d044c7905 134 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 3.9E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c27210 6ffe62bfac2943c808af140d044c7905 134 SMART SM00345 20 79 5.5E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c16240 9e76af0356884771369d9ace28891365 283 Gene3D G3DSA:2.60.200.30 121 257 8.6E-88 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c16240 9e76af0356884771369d9ace28891365 283 Hamap MF_00361 NAD kinase [nadK]. 2 280 32.487 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c16240 9e76af0356884771369d9ace28891365 283 SUPERFAMILY SSF111331 3 278 1.31E-81 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Tph_c16240 9e76af0356884771369d9ace28891365 283 Pfam PF01513 ATP-NAD kinase 53 264 1.4E-61 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c16240 9e76af0356884771369d9ace28891365 283 Gene3D G3DSA:3.40.50.10330 22 279 8.6E-88 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Tph_c23320 cd4aeb862077c117ad0f8d70c419f544 138 Gene3D G3DSA:3.40.50.300 53 132 1.1E-10 T 14-10-2018 Tph_c23320 cd4aeb862077c117ad0f8d70c419f544 138 Pfam PF01695 IstB-like ATP binding protein 49 126 6.2E-13 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c23320 cd4aeb862077c117ad0f8d70c419f544 138 SUPERFAMILY SSF52540 27 125 7.45E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11200 8d234d6505e33f087f05b8a2d202f6ad 265 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 209 226 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Tph_c11200 8d234d6505e33f087f05b8a2d202f6ad 265 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 36 264 41.771 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tph_c11200 8d234d6505e33f087f05b8a2d202f6ad 265 Pfam PF01255 Putative undecaprenyl diphosphate synthase 43 263 8.0E-85 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tph_c11200 8d234d6505e33f087f05b8a2d202f6ad 265 Gene3D G3DSA:3.40.1180.10 18 265 7.0E-101 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Tph_c11200 8d234d6505e33f087f05b8a2d202f6ad 265 SUPERFAMILY SSF64005 33 259 7.46E-93 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Tph_c11200 8d234d6505e33f087f05b8a2d202f6ad 265 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 36 263 5.2E-89 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Tph_c07600 98a64cd05cea518efe9386d00f461996 493 Pfam PF13154 Protein of unknown function (DUF3991) 121 196 4.5E-21 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 Tph_c07600 98a64cd05cea518efe9386d00f461996 493 Pfam PF13155 Toprim-like 201 292 3.1E-22 T 14-10-2018 Tph_c07600 98a64cd05cea518efe9386d00f461996 493 Gene3D G3DSA:3.40.1360.10 189 299 1.8E-10 T 14-10-2018 Tph_c07600 98a64cd05cea518efe9386d00f461996 493 SUPERFAMILY SSF57783 6 84 4.76E-12 T 14-10-2018 Tph_c07600 98a64cd05cea518efe9386d00f461996 493 SUPERFAMILY SSF56731 126 294 2.22E-8 T 14-10-2018 Tph_c12000 13f5346fca86bd8842c0d070b1191011 161 SUPERFAMILY SSF55846 2 126 1.83E-35 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c12000 13f5346fca86bd8842c0d070b1191011 161 SMART SM00701 1 114 6.6E-9 T 14-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c12000 13f5346fca86bd8842c0d070b1191011 161 Gene3D G3DSA:3.40.80.10 1 133 6.9E-38 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c12000 13f5346fca86bd8842c0d070b1191011 161 SMART SM00644 2 122 4.6E-4 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c12000 13f5346fca86bd8842c0d070b1191011 161 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 3 122 3.3E-22 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 Tph_c18900 2d90e279953f8af6e1bc6ff15c3bbbc9 420 SUPERFAMILY SSF52540 14 332 6.0E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c18900 2d90e279953f8af6e1bc6ff15c3bbbc9 420 Gene3D G3DSA:3.40.50.300 5 221 1.4E-34 T 14-10-2018 Tph_c18900 2d90e279953f8af6e1bc6ff15c3bbbc9 420 Gene3D G3DSA:1.10.8.80 266 350 2.4E-7 T 14-10-2018 Tph_c18900 2d90e279953f8af6e1bc6ff15c3bbbc9 420 SMART SM00382 31 225 3.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 3.4E-109 T 14-10-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 PIRSF PIRSF012290 1 218 3.6E-74 T 14-10-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0031469 Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 SUPERFAMILY SSF143414 35 110 1.7E-5 T 14-10-2018 IPR037233 CcmK-like superfamily Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 Gene3D G3DSA:3.30.70.1810 8 107 3.0E-43 T 14-10-2018 Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 Pfam PF00936 BMC domain 36 107 4.3E-14 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 Gene3D G3DSA:3.30.70.1810 108 218 1.1E-47 T 14-10-2018 Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 SMART SM00877 145 215 8.7E-5 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c06960 7c28497c68f0dc8cbb7313a12a1626b0 218 SMART SM00877 35 132 4.2E-10 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c19700 c0a4066172004c3b6ca7fbe966ea3dd3 414 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 4.2E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c19700 c0a4066172004c3b6ca7fbe966ea3dd3 414 Pfam PF01548 Transposase 5 165 5.3E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c00560 636bdd2612fa3c98b6084b62cd1c6823 75 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 48 1.3E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tph_c00560 636bdd2612fa3c98b6084b62cd1c6823 75 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 38 1.8E-6 T 14-10-2018 Tph_c00560 636bdd2612fa3c98b6084b62cd1c6823 75 SUPERFAMILY SSF143120 2 38 6.41E-7 T 14-10-2018 IPR036165 YefM-like superfamily Tph_c01200 3fb3ec1da7990c43e3c9a6150aed52ee 260 SMART SM00382 28 216 4.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c01200 3fb3ec1da7990c43e3c9a6150aed52ee 260 SUPERFAMILY SSF52540 3 231 5.99E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01200 3fb3ec1da7990c43e3c9a6150aed52ee 260 Pfam PF00005 ABC transporter 19 168 4.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c01200 3fb3ec1da7990c43e3c9a6150aed52ee 260 Gene3D G3DSA:3.40.50.300 2 255 4.9E-71 T 14-10-2018 Tph_c01200 3fb3ec1da7990c43e3c9a6150aed52ee 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 Gene3D G3DSA:2.30.30.240 92 170 6.1E-21 T 14-10-2018 Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 Pfam PF01782 RimM N-terminal domain 7 87 8.0E-23 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 SUPERFAMILY SSF50346 97 167 1.02E-19 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 Pfam PF05239 PRC-barrel domain 95 167 1.3E-7 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 166 7.4E-46 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 167 24.259 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 Gene3D G3DSA:2.40.30.60 3 90 1.1E-22 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Tph_c10250 c30d3a4c3f018036aa84903f52a6a73f 170 SUPERFAMILY SSF50447 3 88 1.59E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Tph_c20480 a450033e00b057a580fb7980e3d9acd4 226 SUPERFAMILY SSF52540 1 221 2.08E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20480 a450033e00b057a580fb7980e3d9acd4 226 Gene3D G3DSA:3.40.50.300 1 224 7.5E-71 T 14-10-2018 Tph_c20480 a450033e00b057a580fb7980e3d9acd4 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c20480 a450033e00b057a580fb7980e3d9acd4 226 SMART SM00382 30 217 4.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c20480 a450033e00b057a580fb7980e3d9acd4 226 Pfam PF00005 ABC transporter 21 169 3.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 Gene3D G3DSA:3.40.50.790 68 159 2.2E-85 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 3.5E-56 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 SUPERFAMILY SSF56808 6 225 6.93E-86 T 14-10-2018 IPR023674 Ribosomal protein L1-like Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 225 3.7E-105 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 PIRSF PIRSF002155 1 226 3.5E-82 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.731 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c26070 5ff5d40ca8bbb55acb3cc46ff41125f0 231 Gene3D G3DSA:3.30.190.20 25 224 2.2E-85 T 14-10-2018 Tph_c08380 727c480514a9b23dd17aa6318f92bbec 226 Gene3D G3DSA:2.50.20.10 40 225 7.2E-9 T 14-10-2018 Tph_c08860 aae9108319fcaf728cd3cba222f014d8 253 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 236 7.1E-81 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Tph_c08860 aae9108319fcaf728cd3cba222f014d8 253 SUPERFAMILY SSF51366 1 238 4.04E-72 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c08860 aae9108319fcaf728cd3cba222f014d8 253 Pfam PF00977 Histidine biosynthesis protein 3 231 1.3E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Tph_c08860 aae9108319fcaf728cd3cba222f014d8 253 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 37.04 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Tph_c08860 aae9108319fcaf728cd3cba222f014d8 253 Gene3D G3DSA:3.20.20.70 2 247 2.7E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c02990 2889095db9627f9702f64cd4abc4388a 137 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 62 104 3.3E-13 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tph_c02990 2889095db9627f9702f64cd4abc4388a 137 SUPERFAMILY SSF143120 64 103 9.94E-11 T 14-10-2018 IPR036165 YefM-like superfamily Tph_c02990 2889095db9627f9702f64cd4abc4388a 137 Gene3D G3DSA:3.40.1620.10 59 99 1.2E-10 T 14-10-2018 Tph_c02990 2889095db9627f9702f64cd4abc4388a 137 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 64 104 1.6E-12 T 14-10-2018 Tph_c03570 c1226d57e89bb882548a0f150aec4ffb 199 Gene3D G3DSA:3.40.50.150 3 195 3.0E-36 T 14-10-2018 Tph_c03570 c1226d57e89bb882548a0f150aec4ffb 199 Pfam PF13847 Methyltransferase domain 37 152 2.3E-25 T 14-10-2018 IPR025714 Methyltransferase domain Tph_c03570 c1226d57e89bb882548a0f150aec4ffb 199 SUPERFAMILY SSF53335 6 191 4.87E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c29150 8dee6772e4a75d76c56aca720f96fc0d 212 Pfam PF00005 ABC transporter 18 155 3.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c29150 8dee6772e4a75d76c56aca720f96fc0d 212 SUPERFAMILY SSF52540 17 206 3.75E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c29150 8dee6772e4a75d76c56aca720f96fc0d 212 SMART SM00382 22 205 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c29150 8dee6772e4a75d76c56aca720f96fc0d 212 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c29150 8dee6772e4a75d76c56aca720f96fc0d 212 Gene3D G3DSA:3.40.50.300 2 210 1.2E-55 T 14-10-2018 Tph_c08090 9ca37215a5e044da803ab07a44c5a43c 250 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 241 1.1E-10 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Tph_c08090 9ca37215a5e044da803ab07a44c5a43c 250 SUPERFAMILY SSF56219 4 247 8.24E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tph_c08090 9ca37215a5e044da803ab07a44c5a43c 250 Gene3D G3DSA:3.60.10.10 3 250 1.2E-38 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Tph_c02210 887eabd57b440eb294c9f8d95de1aeb9 59 Pfam PF02627 Carboxymuconolactone decarboxylase family 20 58 3.2E-6 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Tph_c02210 887eabd57b440eb294c9f8d95de1aeb9 59 Gene3D G3DSA:1.20.1290.10 1 59 4.3E-12 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tph_c02210 887eabd57b440eb294c9f8d95de1aeb9 59 SUPERFAMILY SSF69118 2 58 1.83E-9 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00690 Adhesin family signature 78 91 2.5E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00690 Adhesin family signature 91 108 2.5E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00690 Adhesin family signature 47 65 2.5E-7 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 Pfam PF01297 Zinc-uptake complex component A periplasmic 51 339 9.5E-78 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 Gene3D G3DSA:3.40.50.1980 36 227 2.2E-53 T 14-10-2018 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00691 Adhesin B signature 47 68 4.5E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00691 Adhesin B signature 319 337 4.5E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00691 Adhesin B signature 72 90 4.5E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 PRINTS PR00691 Adhesin B signature 91 110 4.5E-13 T 14-10-2018 IPR006129 Adhesin B GO:0007155 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 Gene3D G3DSA:3.40.50.1980 229 349 2.3E-40 T 14-10-2018 Tph_c22420 82ffc7f94ff069dd71c7a4cedbb00829 350 SUPERFAMILY SSF53807 44 341 8.34E-83 T 14-10-2018 Tph_c14250 a6079d55b0cf5589c48b101f3362db3b 568 Pfam PF00498 FHA domain 64 127 1.8E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Tph_c14250 a6079d55b0cf5589c48b101f3362db3b 568 SUPERFAMILY SSF49879 53 138 2.68E-25 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Tph_c14250 a6079d55b0cf5589c48b101f3362db3b 568 Pfam PF01098 Cell cycle protein 221 550 3.0E-86 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c14250 a6079d55b0cf5589c48b101f3362db3b 568 Gene3D G3DSA:2.60.200.20 27 142 2.0E-27 T 14-10-2018 Tph_c14250 a6079d55b0cf5589c48b101f3362db3b 568 SMART SM00240 62 112 5.6E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Tph_c23490 46b857acfc48db2e368dfeb90a7fa8b0 92 ProDom PD050957 AF2391 PREDICTED 1 31 6.0E-5 T 14-10-2018 Tph_c23490 46b857acfc48db2e368dfeb90a7fa8b0 92 Pfam PF17253 Family of unknown function (DUF5320) 1 92 1.7E-27 T 14-10-2018 IPR035205 Protein of unknown function DUF5320 Tph_c23670 d48cf871936d1a8e6c253a9cdccccdf7 236 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c23670 d48cf871936d1a8e6c253a9cdccccdf7 236 SMART SM00382 35 226 3.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c23670 d48cf871936d1a8e6c253a9cdccccdf7 236 Gene3D G3DSA:3.40.50.300 4 226 4.9E-64 T 14-10-2018 Tph_c23670 d48cf871936d1a8e6c253a9cdccccdf7 236 Pfam PF00005 ABC transporter 26 169 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c23670 d48cf871936d1a8e6c253a9cdccccdf7 236 SUPERFAMILY SSF52540 6 223 9.72E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23420 654dd7cd764749c8990c52705431a7cb 92 Gene3D G3DSA:3.60.15.10 1 92 9.2E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c23420 654dd7cd764749c8990c52705431a7cb 92 SUPERFAMILY SSF56281 10 79 4.32E-17 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c23420 654dd7cd764749c8990c52705431a7cb 92 Pfam PF00753 Metallo-beta-lactamase superfamily 22 85 2.8E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 Pfam PF04055 Radical SAM superfamily 111 215 3.6E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 Gene3D G3DSA:3.20.20.70 103 458 1.0E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 TIGRFAM TIGR03974 rSAM_six_Cys: SCIFF radical SAM maturase 15 450 6.9E-135 T 14-10-2018 IPR024025 SCIFF radical SAM maturase Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 Pfam PF13353 4Fe-4S single cluster domain 107 212 1.6E-9 T 14-10-2018 Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 351 434 4.2E-18 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 SMART SM00729 105 318 0.0014 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c28110 c9dc42f1c32acb8eed4d629c7b379652 463 SUPERFAMILY SSF102114 106 420 1.96E-50 T 14-10-2018 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 Pfam PF04055 Radical SAM superfamily 18 177 1.4E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 SUPERFAMILY SSF102114 16 218 1.31E-24 T 14-10-2018 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 SMART SM00228 232 304 2.3E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 18 29 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 Gene3D G3DSA:3.20.20.70 13 237 4.3E-22 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 Gene3D G3DSA:2.30.42.10 250 315 7.2E-10 T 14-10-2018 Tph_c18480 84a4bea419ec13f4378e645403130f7c 447 SUPERFAMILY SSF50156 243 291 1.01E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 SUPERFAMILY SSF48024 6 117 1.11E-35 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 Gene3D G3DSA:3.40.50.300 165 445 4.1E-112 T 14-10-2018 Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 Gene3D G3DSA:1.10.860.10 2 164 1.8E-59 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 440 1.7E-179 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 Pfam PF03796 DnaB-like helicase C terminal domain 183 438 2.8E-114 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 SUPERFAMILY SSF52540 181 431 2.01E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00800 d48c46ada2da01b66fa9fe825e5a4d74 460 Pfam PF00772 DnaB-like helicase N terminal domain 8 109 6.7E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Tph_c24980 909d839069aeba357fa94e436889f259 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 264 4.4E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c24980 909d839069aeba357fa94e436889f259 271 Gene3D G3DSA:1.10.3720.10 54 264 5.8E-22 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c24980 909d839069aeba357fa94e436889f259 271 SUPERFAMILY SSF161098 61 252 5.63E-26 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c12390 2348f73f06fa5b1c475ce27ce9084527 153 Gene3D G3DSA:2.30.30.110 4 129 3.2E-26 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Tph_c12390 2348f73f06fa5b1c475ce27ce9084527 153 SUPERFAMILY SSF50118 9 121 2.13E-22 T 14-10-2018 Tph_c12390 2348f73f06fa5b1c475ce27ce9084527 153 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 11 119 1.5E-17 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c28720 9f1a73ce9ff8e23fb0adc944afdc9d09 263 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 8 16 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 Tph_c28720 9f1a73ce9ff8e23fb0adc944afdc9d09 263 SUPERFAMILY SSF51556 7 259 7.76E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c28720 9f1a73ce9ff8e23fb0adc944afdc9d09 263 Pfam PF01026 TatD related DNase 9 257 1.7E-74 T 14-10-2018 IPR001130 TatD family GO:0016788 Tph_c28720 9f1a73ce9ff8e23fb0adc944afdc9d09 263 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 8 258 8.2E-76 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 Tph_c28720 9f1a73ce9ff8e23fb0adc944afdc9d09 263 Gene3D G3DSA:3.20.20.140 2 261 1.2E-99 T 14-10-2018 Tph_c28720 9f1a73ce9ff8e23fb0adc944afdc9d09 263 PIRSF PIRSF005902 1 262 3.3E-80 T 14-10-2018 IPR001130 TatD family GO:0016788 Tph_c16780 c7e09c4fba19a7749b25bf0b77b8e7a4 237 SUPERFAMILY SSF88946 105 217 9.73E-34 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c16780 c7e09c4fba19a7749b25bf0b77b8e7a4 237 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 151 217 8.1E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c16780 c7e09c4fba19a7749b25bf0b77b8e7a4 237 Gene3D G3DSA:1.20.120.1810 125 220 6.4E-23 T 14-10-2018 Tph_c16780 c7e09c4fba19a7749b25bf0b77b8e7a4 237 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 180 193 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16780 c7e09c4fba19a7749b25bf0b77b8e7a4 237 PIRSF PIRSF000770 101 227 1.5E-37 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Tph_c16780 c7e09c4fba19a7749b25bf0b77b8e7a4 237 Pfam PF04542 Sigma-70 region 2 156 217 5.5E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 114 132 4.5E-42 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 135 151 4.5E-42 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 89 100 4.5E-42 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 170 183 4.5E-42 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 154 167 4.5E-42 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 198 207 4.5E-42 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 5 317 5.4E-130 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 6 317 46.302 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 SUPERFAMILY SSF52096 7 317 1.76E-94 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 7 149 8.3E-62 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 Tph_c13690 057b272f7c683463cdd2d57ace6bae3e 319 Gene3D G3DSA:3.90.226.10 2 319 8.0E-115 T 14-10-2018 Tph_c13250 3c83680abbddfb0e0e1636f7f213c706 543 SUPERFAMILY SSF64182 1 383 4.06E-95 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tph_c13250 3c83680abbddfb0e0e1636f7f213c706 543 Pfam PF01368 DHH family 18 118 2.9E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c13250 3c83680abbddfb0e0e1636f7f213c706 543 Gene3D G3DSA:3.10.310.30 254 374 9.0E-24 T 14-10-2018 Tph_c13250 3c83680abbddfb0e0e1636f7f213c706 543 Pfam PF02272 DHHA1 domain 250 368 1.3E-10 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tph_c13250 3c83680abbddfb0e0e1636f7f213c706 543 Gene3D G3DSA:3.90.1640.30 1 253 3.2E-78 T 14-10-2018 Tph_c25230 d4f74b8415221716bb4b5e4e5c2ec61f 301 Gene3D G3DSA:3.20.20.70 21 274 8.4E-14 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c25230 d4f74b8415221716bb4b5e4e5c2ec61f 301 SUPERFAMILY SSF102114 38 277 1.28E-22 T 14-10-2018 Tph_c25230 d4f74b8415221716bb4b5e4e5c2ec61f 301 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 214 287 2.2E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c15200 b7f2ecd3a2685221623d08e4575343c7 558 SUPERFAMILY SSF56112 102 437 1.61E-29 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c15200 b7f2ecd3a2685221623d08e4575343c7 558 Pfam PF03109 ABC1 family 119 238 2.0E-36 T 14-10-2018 IPR004147 UbiB domain Tph_c10780 a4934311cd7800c4125c04d5daaef053 535 Pfam PF01609 Transposase DDE domain 176 464 1.5E-11 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c10780 a4934311cd7800c4125c04d5daaef053 535 SUPERFAMILY SSF53098 210 484 1.74E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c10780 a4934311cd7800c4125c04d5daaef053 535 Pfam PF14104 Domain of unknown function (DUF4277) 33 128 1.8E-12 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c26750 5376bc14bb7944127d1f258e57b5d029 128 SMART SM00905 10 122 1.2E-51 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tph_c26750 5376bc14bb7944127d1f258e57b5d029 128 SUPERFAMILY SSF55620 7 123 1.0E-38 T 14-10-2018 Tph_c26750 5376bc14bb7944127d1f258e57b5d029 128 Gene3D G3DSA:3.30.1130.10 7 126 2.2E-44 T 14-10-2018 Tph_c26750 5376bc14bb7944127d1f258e57b5d029 128 Pfam PF02152 Dihydroneopterin aldolase 10 120 2.4E-38 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tph_c26750 5376bc14bb7944127d1f258e57b5d029 128 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 8 122 2.3E-39 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tph_c26750 5376bc14bb7944127d1f258e57b5d029 128 TIGRFAM TIGR00526 folB_dom: FolB domain 8 123 6.6E-34 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Tph_c12680 bbabbef69005444cc2b3150950ec406d 261 Gene3D G3DSA:3.10.20.310 46 113 3.3E-9 T 14-10-2018 Tph_c12680 bbabbef69005444cc2b3150950ec406d 261 Pfam PF08478 POTRA domain, FtsQ-type 46 114 1.5E-18 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type Tph_c12680 bbabbef69005444cc2b3150950ec406d 261 Pfam PF03799 Cell division protein FtsQ 122 237 7.2E-11 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB Tph_c11090 5b0182e458f57f4d1f08b144cddc6cb9 161 Gene3D G3DSA:3.30.1330.200 3 161 2.3E-51 T 14-10-2018 IPR038592 CheD-like superfamily Tph_c11090 5b0182e458f57f4d1f08b144cddc6cb9 161 SUPERFAMILY SSF64438 5 159 5.77E-49 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Tph_c11090 5b0182e458f57f4d1f08b144cddc6cb9 161 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 157 28.469 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Tph_c11090 5b0182e458f57f4d1f08b144cddc6cb9 161 Pfam PF03975 CheD chemotactic sensory transduction 48 153 6.9E-36 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 Tph_c08240 3e26e0052a02c8d33f7cb604114e3128 179 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 131 149 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08240 3e26e0052a02c8d33f7cb604114e3128 179 Gene3D G3DSA:1.10.10.1590 24 90 3.7E-13 T 14-10-2018 Tph_c08240 3e26e0052a02c8d33f7cb604114e3128 179 SUPERFAMILY SSF52833 30 176 1.12E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c08240 3e26e0052a02c8d33f7cb604114e3128 179 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 32 173 4.7E-50 T 14-10-2018 Tph_c08240 3e26e0052a02c8d33f7cb604114e3128 179 PIRSF PIRSF000216 17 179 3.8E-50 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08240 3e26e0052a02c8d33f7cb604114e3128 179 Gene3D G3DSA:3.40.30.10 91 173 1.6E-31 T 14-10-2018 Tph_c14160 964be41b49e9dd7357d47716a711091c 265 Gene3D G3DSA:3.30.420.10 1 179 1.6E-20 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c14160 964be41b49e9dd7357d47716a711091c 265 Pfam PF09299 Mu transposase, C-terminal 179 230 8.3E-14 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal Tph_c14160 964be41b49e9dd7357d47716a711091c 265 Pfam PF00665 Integrase core domain 2 116 7.0E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c14160 964be41b49e9dd7357d47716a711091c 265 SUPERFAMILY SSF53098 2 158 3.41E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c07790 57ce50fbbe1c5414f78332f4dd777750 190 Pfam PF06114 IrrE N-terminal-like domain 45 167 1.7E-15 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Tph_c07790 57ce50fbbe1c5414f78332f4dd777750 190 Gene3D G3DSA:3.40.390.50 19 132 1.9E-7 T 14-10-2018 Tph_c18750 37ba809362f81d6ea7275499c8e3f7c7 384 SUPERFAMILY SSF49503 14 138 2.48E-19 T 14-10-2018 IPR008972 Cupredoxin Tph_c18750 37ba809362f81d6ea7275499c8e3f7c7 384 Pfam PF07732 Multicopper oxidase 36 137 6.2E-11 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 Tph_c18750 37ba809362f81d6ea7275499c8e3f7c7 384 SUPERFAMILY SSF49503 186 377 2.03E-10 T 14-10-2018 IPR008972 Cupredoxin Tph_c18750 37ba809362f81d6ea7275499c8e3f7c7 384 Gene3D G3DSA:2.60.40.420 2 303 3.7E-45 T 14-10-2018 IPR008972 Cupredoxin Tph_c19210 9d3d0e78825c99d4ac2d6ac73916e67d 153 SUPERFAMILY SSF82649 1 118 8.37E-35 T 14-10-2018 Tph_c19210 9d3d0e78825c99d4ac2d6ac73916e67d 153 Pfam PF01592 NifU-like N terminal domain 2 120 9.2E-33 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Tph_c19210 9d3d0e78825c99d4ac2d6ac73916e67d 153 Gene3D G3DSA:3.90.1010.10 1 137 1.0E-44 T 14-10-2018 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 Gene3D G3DSA:3.40.50.300 4 240 3.2E-67 T 14-10-2018 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 Gene3D G3DSA:3.40.50.300 303 553 1.7E-65 T 14-10-2018 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 Pfam PF00005 ABC transporter 321 463 3.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 SMART SM00382 30 229 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03230 c547037a74d612c002272f52c25d9ede 571 SMART SM00382 330 519 9.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03230 c547037a74d612c002272f52c25d9ede 571 Pfam PF00005 ABC transporter 21 172 2.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 SUPERFAMILY SSF52540 2 233 1.15E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03230 c547037a74d612c002272f52c25d9ede 571 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c03230 c547037a74d612c002272f52c25d9ede 571 SUPERFAMILY SSF52540 303 528 2.21E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23140 ebce3a35155365e8a8f99165c48aeffb 400 Gene3D G3DSA:3.30.2400.10 168 381 9.7E-27 T 14-10-2018 Tph_c23140 ebce3a35155365e8a8f99165c48aeffb 400 Pfam PF05065 Phage capsid family 124 396 9.2E-90 T 14-10-2018 IPR024455 Phage capsid Tph_c23140 ebce3a35155365e8a8f99165c48aeffb 400 Gene3D G3DSA:3.30.2320.10 251 350 9.7E-27 T 14-10-2018 Tph_c23140 ebce3a35155365e8a8f99165c48aeffb 400 SUPERFAMILY SSF56563 117 397 2.62E-88 T 14-10-2018 Tph_c23140 ebce3a35155365e8a8f99165c48aeffb 400 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 7 396 1.6E-118 T 14-10-2018 IPR024455 Phage capsid Tph_c19090 25762c9f9c15fc0836f4a04b576887d6 262 Pfam PF04909 Amidohydrolase 3 262 1.5E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c19090 25762c9f9c15fc0836f4a04b576887d6 262 SUPERFAMILY SSF51556 1 262 5.11E-51 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c19090 25762c9f9c15fc0836f4a04b576887d6 262 Gene3D G3DSA:3.20.20.140 1 261 4.3E-52 T 14-10-2018 Tph_c13190 c1ed7fa76eb4e4b13434033ac81ea78d 153 Gene3D G3DSA:3.40.1280.10 1 153 1.3E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tph_c13190 c1ed7fa76eb4e4b13434033ac81ea78d 153 Pfam PF00588 SpoU rRNA Methylase family 2 141 2.6E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Tph_c13190 c1ed7fa76eb4e4b13434033ac81ea78d 153 PIRSF PIRSF029256 1 153 1.2E-61 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Tph_c13190 c1ed7fa76eb4e4b13434033ac81ea78d 153 SUPERFAMILY SSF75217 1 151 3.92E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tph_c13190 c1ed7fa76eb4e4b13434033ac81ea78d 153 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 150 32.724 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Tph_c13190 c1ed7fa76eb4e4b13434033ac81ea78d 153 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 152 1.3E-57 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 Tph_c28660 d9ec2270afa9e6463bd67c68c7305af9 336 Gene3D G3DSA:3.40.50.12110 1 112 3.9E-42 T 14-10-2018 Tph_c28660 d9ec2270afa9e6463bd67c68c7305af9 336 SUPERFAMILY SSF102114 81 286 9.16E-7 T 14-10-2018 Tph_c28660 d9ec2270afa9e6463bd67c68c7305af9 336 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 2 336 8.5E-147 T 14-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 Tph_c28660 d9ec2270afa9e6463bd67c68c7305af9 336 Gene3D G3DSA:3.80.30.30 113 336 3.7E-73 T 14-10-2018 Tph_c23630 db15deb2238e48277d155226493f3e50 225 Gene3D G3DSA:3.40.50.2300 3 127 5.5E-29 T 14-10-2018 Tph_c23630 db15deb2238e48277d155226493f3e50 225 SMART SM00862 150 222 2.6E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c23630 db15deb2238e48277d155226493f3e50 225 SMART SM00448 3 113 5.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c23630 db15deb2238e48277d155226493f3e50 225 SUPERFAMILY SSF46894 127 223 1.7E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c23630 db15deb2238e48277d155226493f3e50 225 SUPERFAMILY SSF52172 2 124 2.99E-33 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c23630 db15deb2238e48277d155226493f3e50 225 Gene3D G3DSA:1.10.10.10 130 225 3.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c23630 db15deb2238e48277d155226493f3e50 225 Pfam PF00072 Response regulator receiver domain 5 111 2.3E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c23630 db15deb2238e48277d155226493f3e50 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 222 2.1E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Tph_c00680 a118f5dc51f7685b74ca913856c26ee6 195 Gene3D G3DSA:3.30.110.40 6 87 4.3E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily Tph_c00680 a118f5dc51f7685b74ca913856c26ee6 195 SUPERFAMILY SSF64307 7 73 1.57E-13 T 14-10-2018 IPR036868 TusA-like domain superfamily Tph_c00680 a118f5dc51f7685b74ca913856c26ee6 195 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 8 194 1.2E-59 T 14-10-2018 IPR019870 Selenium metabolism protein YedF Tph_c00680 a118f5dc51f7685b74ca913856c26ee6 195 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 14-10-2018 IPR001455 TusA-like domain Tph_c00680 a118f5dc51f7685b74ca913856c26ee6 195 Pfam PF01206 Sulfurtransferase TusA 8 72 7.9E-14 T 14-10-2018 IPR001455 TusA-like domain Tph_c00680 a118f5dc51f7685b74ca913856c26ee6 195 SUPERFAMILY SSF75169 97 192 2.0E-10 T 14-10-2018 IPR027396 DsrEFH-like Tph_c11040 8d130b68ba81a8b046240fa8f37e62a5 258 PIRSF PIRSF003092 1 256 5.8E-72 T 14-10-2018 IPR025501 ATP binding protein MinD Tph_c11040 8d130b68ba81a8b046240fa8f37e62a5 258 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 1 207 5.7E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c11040 8d130b68ba81a8b046240fa8f37e62a5 258 SUPERFAMILY SSF52540 1 229 4.25E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11040 8d130b68ba81a8b046240fa8f37e62a5 258 Gene3D G3DSA:3.40.50.300 1 228 6.0E-50 T 14-10-2018 Tph_c18710 af7effbd8d4a7c02479687e3d41689b4 145 Pfam PF07670 Nucleoside recognition 22 110 2.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c17800 9946811ea94e77da39fe133d32cba134 408 Gene3D G3DSA:1.10.4160.10 1 403 1.1E-37 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Tph_c17800 9946811ea94e77da39fe133d32cba134 408 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 3 340 4.5E-19 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Tph_c17800 9946811ea94e77da39fe133d32cba134 408 TIGRFAM TIGR02358 thia_cytX: putative hydroxymethylpyrimidine transporter CytX 11 383 3.0E-118 T 14-10-2018 IPR012732 Hydroxymethylpyrimidine transporter CytX Tph_c23550 1dd460933603f586a3000aaec4ccca3d 58 SUPERFAMILY SSF52540 1 52 7.68E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10490 f2ca3071ddb7233bba889ca85a43b88e 121 Pfam PF06210 Protein of unknown function (DUF1003) 71 112 4.0E-8 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PRINTS PR00148 Enolase signature 161 174 6.7E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PRINTS PR00148 Enolase signature 363 380 6.7E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PRINTS PR00148 Enolase signature 311 322 6.7E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PRINTS PR00148 Enolase signature 334 348 6.7E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PRINTS PR00148 Enolase signature 37 51 6.7E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PRINTS PR00148 Enolase signature 107 123 6.7E-49 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 419 2.1E-214 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 Gene3D G3DSA:3.30.390.10 1 127 1.0E-56 T 14-10-2018 IPR029017 Enolase-like, N-terminal Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 Gene3D G3DSA:3.20.20.120 128 421 1.5E-136 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 419 1.1E-135 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 SMART SM01192 139 421 4.9E-221 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 SMART SM01193 4 134 8.4E-98 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 SUPERFAMILY SSF54826 3 137 3.01E-58 T 14-10-2018 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 SUPERFAMILY SSF51604 139 419 1.56E-130 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 PIRSF PIRSF001400 1 420 1.1E-193 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 Hamap MF_00318 Enolase [eno]. 2 411 45.78 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Tph_c06780 f4bbe8d957aee2256443ba7a26387adb 421 Pfam PF03952 Enolase, N-terminal domain 4 134 1.1E-60 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Tph_c26710 4913cb265337617bfbc407ba6070785a 289 Gene3D G3DSA:3.40.50.620 1 175 1.7E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c26710 4913cb265337617bfbc407ba6070785a 289 SUPERFAMILY SSF52374 1 281 1.76E-106 T 14-10-2018 Tph_c26710 4913cb265337617bfbc407ba6070785a 289 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 2.8E-103 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tph_c26710 4913cb265337617bfbc407ba6070785a 289 Gene3D G3DSA:3.30.1300.10 176 288 1.5E-32 T 14-10-2018 Tph_c26710 4913cb265337617bfbc407ba6070785a 289 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 1.9E-103 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tph_c26710 4913cb265337617bfbc407ba6070785a 289 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 40.076 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Tph_c13900 ba75c4a89dd5fea59fdf84a23f79e1ea 123 Gene3D G3DSA:1.20.1500.10 1 109 3.7E-25 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily Tph_c13900 ba75c4a89dd5fea59fdf84a23f79e1ea 123 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 3 104 2.8E-21 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA Tph_c13900 ba75c4a89dd5fea59fdf84a23f79e1ea 123 SUPERFAMILY SSF158622 1 106 2.88E-24 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 Pfam PF16916 Dimerisation domain of Zinc Transporter 206 283 3.3E-25 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 SUPERFAMILY SSF161111 6 202 5.23E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 SUPERFAMILY SSF160240 204 284 1.16E-22 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 Gene3D G3DSA:1.20.1510.10 4 200 7.2E-58 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 Gene3D G3DSA:3.30.70.1350 201 286 1.5E-29 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 283 4.6E-67 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tph_c12440 3c51ba4c50838bda45168ac13cad0db9 315 Pfam PF01545 Cation efflux family 8 201 6.1E-48 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Tph_c18350 988a67d4d63192cb65642c3e3983e42c 360 Pfam PF06114 IrrE N-terminal-like domain 140 266 1.0E-13 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Tph_c18350 988a67d4d63192cb65642c3e3983e42c 360 SMART SM00530 6 61 2.9E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c18350 988a67d4d63192cb65642c3e3983e42c 360 Pfam PF01381 Helix-turn-helix 7 61 2.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c18350 988a67d4d63192cb65642c3e3983e42c 360 SUPERFAMILY SSF47413 2 66 2.63E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c18350 988a67d4d63192cb65642c3e3983e42c 360 Gene3D G3DSA:1.10.260.40 1 64 1.1E-20 T 14-10-2018 Tph_c21170 b04b53cada94fbfb4b87d8a418b94766 126 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 2 77 2.5E-20 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c21170 b04b53cada94fbfb4b87d8a418b94766 126 Pfam PF07282 Putative transposase DNA-binding domain 50 119 1.8E-25 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c21800 b04b53cada94fbfb4b87d8a418b94766 126 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 2 77 2.5E-20 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c21800 b04b53cada94fbfb4b87d8a418b94766 126 Pfam PF07282 Putative transposase DNA-binding domain 50 119 1.8E-25 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c12330 97babd516821aa2f3440a70f8cbcfe0e 74 Pfam PF11146 Protein of unknown function (DUF2905) 8 71 6.6E-24 T 14-10-2018 IPR021320 Protein of unknown function DUF2905 Tph_c22310 6b809ae8b16c44143be02fa700958117 302 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 14 297 4.7E-88 T 14-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related Tph_c22310 6b809ae8b16c44143be02fa700958117 302 Gene3D G3DSA:1.20.120.1780 175 302 1.0E-36 T 14-10-2018 Tph_c22310 6b809ae8b16c44143be02fa700958117 302 Pfam PF01040 UbiA prenyltransferase family 31 275 4.3E-52 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Tph_c22310 6b809ae8b16c44143be02fa700958117 302 Gene3D G3DSA:1.10.357.140 21 174 3.0E-49 T 14-10-2018 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Gene3D G3DSA:2.40.340.10 331 400 4.3E-124 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 SUPERFAMILY SSF63867 330 407 2.75E-9 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 170 5.3E-45 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Gene3D G3DSA:2.170.190.11 48 144 4.3E-124 T 14-10-2018 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 SUPERFAMILY SSF63882 5 177 1.96E-54 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 SMART SM00852 183 321 1.0E-39 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 315 2.1E-30 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Gene3D G3DSA:3.90.105.10 27 177 4.3E-124 T 14-10-2018 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Gene3D G3DSA:3.40.980.10 178 330 4.3E-124 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Pfam PF03454 MoeA C-terminal region (domain IV) 337 404 9.9E-9 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 SUPERFAMILY SSF53218 180 325 1.96E-39 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01510 5af32ad5ae0226c87e63060b346b0e93 418 Pfam PF00994 Probable molybdopterin binding domain 183 321 1.7E-28 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c22950 af95fa34be87d176925e3cdb333421c1 561 Pfam PF07510 Protein of unknown function (DUF1524) 350 498 2.2E-5 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 Tph_c22950 af95fa34be87d176925e3cdb333421c1 561 Pfam PF03235 Protein of unknown function DUF262 13 196 4.6E-29 T 14-10-2018 IPR004919 Domain of unknown function DUF262 Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 SUPERFAMILY SSF55073 87 214 3.37E-5 T 14-10-2018 IPR029787 Nucleotide cyclase Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 Gene3D G3DSA:3.90.1640.10 235 445 2.7E-49 T 14-10-2018 Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 Gene3D G3DSA:3.30.70.270 43 219 2.4E-5 T 14-10-2018 Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 Gene3D G3DSA:3.10.310.30 446 555 6.2E-8 T 14-10-2018 Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 Pfam PF01368 DHH family 253 404 2.9E-17 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 SUPERFAMILY SSF64182 251 551 1.44E-57 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 Pfam PF02272 DHHA1 domain 442 551 2.2E-8 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Tph_c00770 75a7f79b240e3506376bdeb11c771bae 563 SMART SM00267 58 213 2.6E-4 T 14-10-2018 IPR000160 GGDEF domain Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 Gene3D G3DSA:3.20.20.370 1 167 1.1E-40 T 14-10-2018 Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 SUPERFAMILY SSF88713 21 138 1.09E-22 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 Pfam PF01522 Polysaccharide deacetylase 60 134 3.5E-13 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 Gene3D G3DSA:3.10.50.10 892 939 4.2E-38 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 Gene3D G3DSA:3.20.20.80 709 965 4.2E-38 T 14-10-2018 Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 SUPERFAMILY SSF51445 715 973 9.3E-23 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 SMART SM00636 687 968 0.0054 T 14-10-2018 IPR011583 Chitinase II GO:0008061 Tph_c23030 4e5883539bf8238e9c2e5ae2d4aea3ae 992 Pfam PF00704 Glycosyl hydrolases family 18 763 968 5.1E-10 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 Tph_c11290 cd8057fe4e4609d1e12723cff25d8ca0 91 Pfam PF04296 Protein of unknown function (DUF448) 10 83 1.5E-27 T 14-10-2018 IPR007393 Domain of unknown function DUF448 Tph_c11290 cd8057fe4e4609d1e12723cff25d8ca0 91 Gene3D G3DSA:3.30.1230.10 1 90 4.2E-31 T 14-10-2018 IPR035931 YlxR-like superfamily Tph_c11290 cd8057fe4e4609d1e12723cff25d8ca0 91 SUPERFAMILY SSF64376 5 86 1.96E-26 T 14-10-2018 IPR035931 YlxR-like superfamily Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 SUPERFAMILY SSF53807 20 433 6.21E-118 T 14-10-2018 Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 Gene3D G3DSA:3.40.50.1980 47 177 1.5E-162 T 14-10-2018 Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 Gene3D G3DSA:3.40.50.1980 25 433 1.5E-162 T 14-10-2018 Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 42 424 1.5E-106 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 60 67 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 Gene3D G3DSA:3.40.50.1980 178 310 1.5E-162 T 14-10-2018 Tph_c08700 5441d890d1b1fd5c11818977ae2c5564 440 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 120 134 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Tph_c28930 9b4c4eb6ad1fcbd6fb0dc3db938250e4 241 SUPERFAMILY SSF116726 132 215 1.83E-22 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c28930 9b4c4eb6ad1fcbd6fb0dc3db938250e4 241 SUPERFAMILY SSF51735 4 135 4.33E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c28930 9b4c4eb6ad1fcbd6fb0dc3db938250e4 241 Pfam PF02080 TrkA-C domain 152 216 1.0E-15 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Tph_c28930 9b4c4eb6ad1fcbd6fb0dc3db938250e4 241 Gene3D G3DSA:3.40.50.720 1 138 4.2E-32 T 14-10-2018 Tph_c28930 9b4c4eb6ad1fcbd6fb0dc3db938250e4 241 Pfam PF02254 TrkA-N domain 6 121 3.8E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Tph_c28930 9b4c4eb6ad1fcbd6fb0dc3db938250e4 241 Gene3D G3DSA:3.30.70.1450 139 217 1.7E-28 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 Pfam PF01614 Bacterial transcriptional regulator 131 253 3.3E-39 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 SMART SM00346 8 98 2.6E-30 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 Pfam PF09339 IclR helix-turn-helix domain 10 61 4.1E-18 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 SUPERFAMILY SSF46785 8 82 1.92E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 SUPERFAMILY SSF55781 73 255 1.05E-50 T 14-10-2018 Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 Gene3D G3DSA:1.10.10.10 7 79 4.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c04740 80debec8635e017d30fe3aeafa254ae6 256 Gene3D G3DSA:3.30.450.40 80 256 1.6E-62 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c01610 bc23e1b53b814602a09f479dd4102ad9 265 TIGRFAM TIGR01581 Mo_ABC_porter: NifC-like ABC-type porter 34 249 7.0E-66 T 14-10-2018 IPR006469 NifC-like ABC-type porter GO:0005215|GO:0016020|GO:0055085 Tph_c01610 bc23e1b53b814602a09f479dd4102ad9 265 SUPERFAMILY SSF161098 16 253 3.4E-44 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c01610 bc23e1b53b814602a09f479dd4102ad9 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 252 4.0E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c01610 bc23e1b53b814602a09f479dd4102ad9 265 Gene3D G3DSA:1.10.3720.10 5 260 2.3E-55 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c12470 89271d201db369273ad586856033bf30 149 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 146 4.9E-49 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Tph_c12470 89271d201db369273ad586856033bf30 149 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.6E-49 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Tph_c12470 89271d201db369273ad586856033bf30 149 SUPERFAMILY SSF69500 1 145 6.67E-51 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Tph_c12470 89271d201db369273ad586856033bf30 149 Gene3D G3DSA:3.50.80.10 1 148 2.6E-51 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily Tph_c12470 89271d201db369273ad586856033bf30 149 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 32.66 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PIRSF PIRSF002869 2 510 4.8E-140 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 Pfam PF03023 MviN-like protein 31 453 9.1E-101 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PRINTS PR01806 Virulence factor MviN signature 36 55 7.9E-31 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PRINTS PR01806 Virulence factor MviN signature 133 157 7.9E-31 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PRINTS PR01806 Virulence factor MviN signature 353 372 7.9E-31 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PRINTS PR01806 Virulence factor MviN signature 255 281 7.9E-31 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PRINTS PR01806 Virulence factor MviN signature 405 422 7.9E-31 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 PRINTS PR01806 Virulence factor MviN signature 157 178 7.9E-31 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 6 495 18.121 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c05310 19571ca3664254dabc51d238844f4aaa 535 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 6 501 1.6E-114 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Tph_c21830 abb9f68b0d6ef76febf46cd5d2895f57 191 SUPERFAMILY SSF47240 24 184 6.58E-46 T 14-10-2018 IPR009078 Ferritin-like superfamily Tph_c21830 abb9f68b0d6ef76febf46cd5d2895f57 191 Pfam PF05067 Manganese containing catalase 27 100 1.2E-11 T 14-10-2018 IPR007760 Manganese catalase Tph_c21830 abb9f68b0d6ef76febf46cd5d2895f57 191 Gene3D G3DSA:1.20.1260.10 108 184 5.4E-17 T 14-10-2018 IPR012347 Ferritin-like Tph_c21830 abb9f68b0d6ef76febf46cd5d2895f57 191 Gene3D G3DSA:1.20.1260.10 22 107 1.8E-25 T 14-10-2018 IPR012347 Ferritin-like Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 Pfam PF00905 Penicillin binding protein transpeptidase domain 355 601 6.4E-45 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 SUPERFAMILY SSF53955 70 276 1.83E-78 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 90 632 1.2E-200 T 14-10-2018 Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 Pfam PF00912 Transglycosylase 87 254 8.3E-68 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 Gene3D G3DSA:1.10.3810.10 90 281 3.9E-214 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 Gene3D G3DSA:3.40.710.10 327 642 3.9E-214 T 14-10-2018 Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 SUPERFAMILY SSF56601 236 702 2.44E-132 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c11800 5efceed1a4012bad7b876940e160c15f 814 Gene3D G3DSA:3.90.1310.20 74 542 3.9E-214 T 14-10-2018 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Gene3D G3DSA:3.30.460.10 156 258 7.1E-15 T 14-10-2018 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SUPERFAMILY SSF81301 158 312 6.34E-28 T 14-10-2018 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SUPERFAMILY SSF47802 3 84 1.28E-19 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Pfam PF14716 Helix-hairpin-helix domain 5 72 7.4E-20 T 14-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Gene3D G3DSA:3.30.210.10 259 323 1.7E-20 T 14-10-2018 IPR037160 DNA polymerase, thumb domain superfamily Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Pfam PF14791 DNA polymerase beta thumb 252 312 1.9E-16 T 14-10-2018 IPR029398 DNA polymerase beta, thumb domain Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SMART SM00483 1 312 5.8E-17 T 14-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SUPERFAMILY SSF47781 91 149 1.16E-7 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Pfam PF14520 Helix-hairpin-helix domain 91 148 4.2E-11 T 14-10-2018 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Gene3D G3DSA:1.10.150.110 1 85 1.9E-26 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Gene3D G3DSA:3.20.20.140 325 571 5.9E-79 T 14-10-2018 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SMART SM00481 336 415 2.4E-20 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SUPERFAMILY SSF89550 334 566 5.1E-58 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 294 311 2.3E-7 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 252 259 2.3E-7 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 58 75 2.3E-7 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Gene3D G3DSA:1.10.150.20 86 150 1.3E-19 T 14-10-2018 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 PIRSF PIRSF005047 1 570 2.3E-218 T 14-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 Pfam PF02811 PHP domain 337 426 2.1E-6 T 14-10-2018 IPR004013 PHP domain GO:0003824 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SMART SM00278 91 110 5.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SMART SM00278 126 145 0.5 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c13380 8a51efbbfc9e8c1730a7ff3a03843e57 571 SMART SM00278 51 70 0.84 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Tph_c22190 aed0dad75c024f2501e9acf2a204895e 290 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 232 290 2.7E-12 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Tph_c22190 aed0dad75c024f2501e9acf2a204895e 290 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 106 4.4E-25 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Tph_c08040 e50baedbaf124d2244646afacbd2af24 168 Gene3D G3DSA:1.10.10.1590 2 72 8.9E-15 T 14-10-2018 Tph_c08040 e50baedbaf124d2244646afacbd2af24 168 Gene3D G3DSA:3.40.30.10 73 167 3.8E-30 T 14-10-2018 Tph_c08040 e50baedbaf124d2244646afacbd2af24 168 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 12 154 2.6E-50 T 14-10-2018 Tph_c08040 e50baedbaf124d2244646afacbd2af24 168 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 112 130 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08040 e50baedbaf124d2244646afacbd2af24 168 SUPERFAMILY SSF52833 5 157 8.39E-51 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c08040 e50baedbaf124d2244646afacbd2af24 168 PIRSF PIRSF000216 1 167 8.6E-53 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c19100 7c70578fbfc484551b0b345e745891b9 115 Gene3D G3DSA:2.60.120.10 1 115 1.3E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tph_c19100 7c70578fbfc484551b0b345e745891b9 115 Pfam PF07883 Cupin domain 41 108 1.7E-15 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Tph_c19100 7c70578fbfc484551b0b345e745891b9 115 SUPERFAMILY SSF51182 15 109 9.99E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tph_c13420 a57f9d8654a8c3c2cce61184855ebd12 106 SUPERFAMILY SSF54913 7 105 1.26E-32 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tph_c13420 a57f9d8654a8c3c2cce61184855ebd12 106 Gene3D G3DSA:3.30.70.120 2 106 4.8E-40 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c13420 a57f9d8654a8c3c2cce61184855ebd12 106 Pfam PF02641 Uncharacterized ACR, COG1993 9 104 1.0E-36 T 14-10-2018 IPR003793 Domain of unknown function DUF190 Tph_c26510 1ec5477d2db9c28b3e219c6ff6c65d8c 208 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 201 41.101 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Tph_c26510 1ec5477d2db9c28b3e219c6ff6c65d8c 208 SUPERFAMILY SSF51366 3 199 6.12E-57 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c26510 1ec5477d2db9c28b3e219c6ff6c65d8c 208 Gene3D G3DSA:3.20.20.70 1 200 1.7E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26510 1ec5477d2db9c28b3e219c6ff6c65d8c 208 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 195 5.8E-47 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Tph_c15500 b036d03e13fd62dab8c54e414f78defd 740 SUPERFAMILY SSF53649 40 361 1.88E-7 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Tph_c11050 530837d82a41aba35c2e82f49c32c957 220 Gene3D G3DSA:2.40.10.220 96 213 4.2E-11 T 14-10-2018 Tph_c11050 530837d82a41aba35c2e82f49c32c957 220 Pfam PF07238 PilZ domain 98 209 1.3E-16 T 14-10-2018 IPR009875 PilZ domain GO:0035438 Tph_c11050 530837d82a41aba35c2e82f49c32c957 220 Pfam PF12945 Flagellar protein YcgR 7 91 6.3E-15 T 14-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal Tph_c11050 530837d82a41aba35c2e82f49c32c957 220 SUPERFAMILY SSF141371 97 195 2.75E-5 T 14-10-2018 Tph_c11000 b2f028139786d2f16eefd7fe6be2c212 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 6.5E-25 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tph_c11000 b2f028139786d2f16eefd7fe6be2c212 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 20 41 6.5E-25 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tph_c11000 b2f028139786d2f16eefd7fe6be2c212 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 6.5E-25 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tph_c11000 b2f028139786d2f16eefd7fe6be2c212 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 6.5E-25 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tph_c11000 b2f028139786d2f16eefd7fe6be2c212 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 255 6.9E-65 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 Tph_c11000 b2f028139786d2f16eefd7fe6be2c212 260 Pfam PF01311 Bacterial export proteins, family 1 14 245 7.6E-71 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Tph_c10240 e4bfb3ec69aa472ad393de13eea9417e 76 Pfam PF13083 KH domain 2 74 5.5E-21 T 14-10-2018 Tph_c10240 e4bfb3ec69aa472ad393de13eea9417e 76 Hamap MF_00088 UPF0109 protein . 1 75 21.393 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 Tph_c10240 e4bfb3ec69aa472ad393de13eea9417e 76 SUPERFAMILY SSF54814 15 61 3.99E-7 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 Gene3D G3DSA:3.40.50.620 1 213 2.8E-83 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 Gene3D G3DSA:2.30.30.280 218 277 7.4E-19 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 357 41.904 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 Pfam PF03054 tRNA methyl transferase 4 356 4.7E-123 T 14-10-2018 Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 SUPERFAMILY SSF52402 3 246 1.35E-57 T 14-10-2018 Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 Gene3D G3DSA:2.40.30.10 278 360 5.4E-24 T 14-10-2018 Tph_c17290 4ea14838abb28f2ea9571631932b8a69 360 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 356 2.2E-109 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 Tph_c18180 59aa15593f3b1925f9fa087d2dbc76da 65 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 7 50 3.0E-19 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Tph_c18180 59aa15593f3b1925f9fa087d2dbc76da 65 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 5 65 18.654 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Tph_c18180 59aa15593f3b1925f9fa087d2dbc76da 65 Pfam PF02416 mttA/Hcf106 family 8 53 3.9E-20 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Tph_c11750 bd746ad0862b3ec840936ff49280c3d7 155 PRINTS PR01837 MgtC/SapB protein signature 33 51 5.8E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tph_c11750 bd746ad0862b3ec840936ff49280c3d7 155 PRINTS PR01837 MgtC/SapB protein signature 95 119 5.8E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tph_c11750 bd746ad0862b3ec840936ff49280c3d7 155 PRINTS PR01837 MgtC/SapB protein signature 14 33 5.8E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tph_c11750 bd746ad0862b3ec840936ff49280c3d7 155 PRINTS PR01837 MgtC/SapB protein signature 68 90 5.8E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tph_c11750 bd746ad0862b3ec840936ff49280c3d7 155 Pfam PF02308 MgtC family 11 135 1.7E-37 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Tph_c13750 b1a35446b0cee3469ef994efdac5617d 320 SUPERFAMILY SSF51412 6 312 6.72E-73 T 14-10-2018 Tph_c13750 b1a35446b0cee3469ef994efdac5617d 320 Gene3D G3DSA:3.20.20.70 7 316 4.4E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c13750 b1a35446b0cee3469ef994efdac5617d 320 Pfam PF03060 Nitronate monooxygenase 86 304 9.9E-52 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Tph_c13750 b1a35446b0cee3469ef994efdac5617d 320 Pfam PF03060 Nitronate monooxygenase 8 81 3.8E-21 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 Tph_c13750 b1a35446b0cee3469ef994efdac5617d 320 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 8 313 1.0E-143 T 14-10-2018 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative Tph_c09720 531da9fe0bee013dd69ddebece19ed59 163 SUPERFAMILY SSF52540 2 116 5.9E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09720 531da9fe0bee013dd69ddebece19ed59 163 Gene3D G3DSA:3.40.50.300 1 161 1.2E-47 T 14-10-2018 Tph_c09720 531da9fe0bee013dd69ddebece19ed59 163 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 157 5.5E-36 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tph_c09720 531da9fe0bee013dd69ddebece19ed59 163 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 134 5.6E-43 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 Tph_c26960 ee727a2e56a426342bbfbf9d4b8a596b 118 Pfam PF04977 Septum formation initiator 33 97 3.1E-13 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Tph_c22050 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c03340 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c27090 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c13830 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c19670 55aa7735621d6ef218e5b07d588103b0 410 Pfam PF00872 Transposase, Mutator family 17 376 1.0E-134 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c00730 8c294ba537049b66964968a1c96b79c1 431 Pfam PF07900 Protein of unknown function (DUF1670) 200 409 3.9E-35 T 14-10-2018 IPR012872 Protein of unknown function DUF1670 Tph_c03670 b8ab9aa8c810a052bba302df48223a08 165 Pfam PF14270 Domain of unknown function (DUF4358) 52 149 2.3E-28 T 14-10-2018 IPR025648 Protein of unknown function DUF4358 Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 Pfam PF00717 Peptidase S24-like 121 193 2.0E-9 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 SUPERFAMILY SSF51306 84 206 1.52E-24 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 SMART SM00530 9 65 7.7E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 Pfam PF13560 Helix-turn-helix domain 5 66 4.3E-14 T 14-10-2018 Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 Gene3D G3DSA:1.10.260.40 2 69 2.6E-18 T 14-10-2018 Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 Gene3D G3DSA:2.10.109.10 90 210 4.5E-28 T 14-10-2018 Tph_c11850 5d9cb4d47b87a833084440484f2ce484 271 SUPERFAMILY SSF47413 5 67 8.04E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c16510 0a7004cfc17ec7ba0fdf4b29afd3f6be 451 Gene3D G3DSA:3.30.2290.10 3 225 1.6E-66 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Tph_c16510 0a7004cfc17ec7ba0fdf4b29afd3f6be 451 SUPERFAMILY SSF111283 10 450 3.4E-128 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Tph_c16510 0a7004cfc17ec7ba0fdf4b29afd3f6be 451 Pfam PF01523 Putative modulator of DNA gyrase 28 317 8.7E-68 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 Gene3D G3DSA:3.40.50.720 491 742 5.1E-63 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 Gene3D G3DSA:3.50.50.60 587 706 5.1E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 490 719 2.4E-20 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 SUPERFAMILY SSF51905 476 748 3.56E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 698 714 3.9E-10 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 575 593 3.9E-10 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 492 511 3.9E-10 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 612 630 3.9E-10 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 SUPERFAMILY SSF51395 71 458 1.16E-51 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 576 590 4.7E-6 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 491 516 4.7E-6 T 14-10-2018 Tph_c13600 c30976d3ea003e86c1a26a0fe0623f5c 748 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 180 265 8.3E-17 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 Tph_c24730 1a9ed49fdf818ff54d87cd571fb3dcfb 281 Gene3D G3DSA:3.40.50.12150 8 265 9.1E-76 T 14-10-2018 Tph_c24730 1a9ed49fdf818ff54d87cd571fb3dcfb 281 Gene3D G3DSA:3.40.50.720 128 254 9.1E-76 T 14-10-2018 Tph_c24730 1a9ed49fdf818ff54d87cd571fb3dcfb 281 SUPERFAMILY SSF51735 133 248 1.97E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c24730 1a9ed49fdf818ff54d87cd571fb3dcfb 281 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 191 2.1E-5 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tph_c24730 1a9ed49fdf818ff54d87cd571fb3dcfb 281 TIGRFAM TIGR03911 pyrrolys_PylD: pyrrolysine biosynthesis protein PylD 2 265 1.5E-68 T 14-10-2018 IPR023914 Pyrrolysine biosynthesis protein PylD Tph_c15380 28aa648cb59bb198b9f9f2211a734c60 217 Gene3D G3DSA:1.20.950.20 1 217 8.4E-55 T 14-10-2018 Tph_c15380 28aa648cb59bb198b9f9f2211a734c60 217 SUPERFAMILY SSF81342 6 216 9.42E-31 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Tph_c15380 28aa648cb59bb198b9f9f2211a734c60 217 Pfam PF01292 Prokaryotic cytochrome b561 11 192 7.8E-15 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 Tph_c03330 0524f2ca451ef006308f1eb3aea9d9ab 307 SMART SM00471 51 213 7.5E-12 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c03330 0524f2ca451ef006308f1eb3aea9d9ab 307 SUPERFAMILY SSF109604 5 287 7.85E-74 T 14-10-2018 Tph_c03330 0524f2ca451ef006308f1eb3aea9d9ab 307 Pfam PF01966 HD domain 55 205 1.1E-10 T 14-10-2018 IPR006674 HD domain Tph_c03330 0524f2ca451ef006308f1eb3aea9d9ab 307 Gene3D G3DSA:1.10.3210.10 2 293 5.1E-76 T 14-10-2018 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 Gene3D G3DSA:1.10.287.80 7 287 2.0E-103 T 14-10-2018 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 5 291 1.7E-97 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 SUPERFAMILY SSF52943 5 291 1.01E-85 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 Pfam PF00231 ATP synthase 5 291 2.5E-97 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 Gene3D G3DSA:3.40.1380.10 62 210 2.0E-103 T 14-10-2018 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 3.0E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 3.0E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 3.0E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 PRINTS PR00126 ATP synthase gamma subunit signature 163 180 3.0E-32 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27380 6dd0cf72f1e1d7d44b419b82103fb5b2 293 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 291 35.047 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 TIGRFAM TIGR00552 nadE: NAD+ synthetase 312 557 1.8E-57 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 33 48 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 SUPERFAMILY SSF56317 1 253 9.81E-71 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 Gene3D G3DSA:3.40.50.620 302 583 2.3E-117 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 Gene3D G3DSA:3.60.110.10 1 280 8.3E-97 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 PIRSF PIRSF006630 1 582 8.1E-205 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 Pfam PF02540 NAD synthase 305 555 7.2E-74 T 14-10-2018 IPR022310 NAD/GMP synthase Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 Pfam PF00795 Carbon-nitrogen hydrolase 2 250 3.5E-41 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 SUPERFAMILY SSF52402 298 563 2.23E-77 T 14-10-2018 Tph_c08610 6e1673a0594b6a26ade1fdd255bad400 585 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 1 580 30.826 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 PIRSF PIRSF000445 1 431 1.2E-151 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 SUPERFAMILY SSF51735 163 315 3.42E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 Gene3D G3DSA:3.30.460.30 2 158 3.6E-51 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 SUPERFAMILY SSF69075 318 419 6.54E-23 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.6E-42 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 Gene3D G3DSA:3.40.50.720 162 312 2.0E-48 T 14-10-2018 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 321 419 3.8E-27 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 8.1E-44 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 SUPERFAMILY SSF69742 2 158 3.01E-41 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 419 5.0E-133 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c15340 ba38a7c87900f8b1923bf6cc55ae2ee6 438 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.531 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Tph_c19260 580da52d6a76335cb15af4770139ddf0 350 Pfam PF04143 Sulphur transport 207 321 8.1E-9 T 14-10-2018 IPR007272 Sulphur transport domain Tph_c19260 580da52d6a76335cb15af4770139ddf0 350 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 8 343 3.7E-149 T 14-10-2018 IPR026366 Putative selenium metabolism protein, YedE family Tph_c17110 f6fc5f9a206e673275e348e726357edc 557 SUPERFAMILY SSF53850 44 521 1.66E-97 T 14-10-2018 Tph_c17110 f6fc5f9a206e673275e348e726357edc 557 Gene3D G3DSA:3.10.105.10 295 507 4.6E-40 T 14-10-2018 Tph_c17110 f6fc5f9a206e673275e348e726357edc 557 PIRSF PIRSF002741 1 529 3.7E-69 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c17110 f6fc5f9a206e673275e348e726357edc 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 415 1.3E-68 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c17110 f6fc5f9a206e673275e348e726357edc 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 111 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Tph_c17110 f6fc5f9a206e673275e348e726357edc 557 Gene3D G3DSA:3.40.190.10 27 294 6.6E-51 T 14-10-2018 Tph_c20910 98bcc28cfc35ff1a5a85aa7adedbbd90 87 Pfam PF12652 CotJB protein 7 84 3.2E-29 T 14-10-2018 IPR024207 Spore coat assembly protein CotJB, domain Tph_c20910 98bcc28cfc35ff1a5a85aa7adedbbd90 87 PIRSF PIRSF010606 1 85 1.4E-28 T 14-10-2018 IPR016571 Spore coat assembly protein CotJB Tph_c19230 308e233ee3458a82ff969553ad4a9024 73 SUPERFAMILY SSF64307 3 67 3.66E-16 T 14-10-2018 IPR036868 TusA-like domain superfamily Tph_c19230 308e233ee3458a82ff969553ad4a9024 73 Pfam PF01206 Sulfurtransferase TusA 4 68 1.5E-18 T 14-10-2018 IPR001455 TusA-like domain Tph_c19230 308e233ee3458a82ff969553ad4a9024 73 Gene3D G3DSA:3.30.110.40 3 73 2.1E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily Tph_c04370 56371766ae97c42fdf820d75f7d3e186 277 Pfam PF02361 Cobalt transport protein 29 246 1.7E-33 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tph_c13290 fb046bdf54dbec6379f748fdfbee97a2 206 SUPERFAMILY SSF54001 68 199 3.27E-20 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Tph_c13290 fb046bdf54dbec6379f748fdfbee97a2 206 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 84 177 3.8E-6 T 14-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family Tph_c13290 fb046bdf54dbec6379f748fdfbee97a2 206 Gene3D G3DSA:3.90.1720.10 51 132 1.2E-5 T 14-10-2018 Tph_c09620 ebb1a172ee35f807dcf806ddb6cdffa2 255 Gene3D G3DSA:1.10.10.10 7 117 8.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c09620 ebb1a172ee35f807dcf806ddb6cdffa2 255 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 34 70 1.1E-5 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 Tph_c09620 ebb1a172ee35f807dcf806ddb6cdffa2 255 SUPERFAMILY SSF46785 18 71 6.39E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c07320 510677592416af62d9be19a6f9d8ebb3 483 Pfam PF00437 Type II/IV secretion system protein 125 398 4.2E-41 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c07320 510677592416af62d9be19a6f9d8ebb3 483 Gene3D G3DSA:3.30.450.380 43 212 2.6E-8 T 14-10-2018 Tph_c07320 510677592416af62d9be19a6f9d8ebb3 483 Gene3D G3DSA:3.40.50.300 217 457 5.7E-48 T 14-10-2018 Tph_c07320 510677592416af62d9be19a6f9d8ebb3 483 SUPERFAMILY SSF52540 102 397 2.91E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c07670 6f03ccf2f9569b6aa553939c24014ad7 343 Pfam PF08239 Bacterial SH3 domain 264 321 7.3E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type Tph_c07670 6f03ccf2f9569b6aa553939c24014ad7 343 Gene3D G3DSA:2.30.30.40 255 333 3.9E-10 T 14-10-2018 Tph_c27150 190d2a4113acc2cca748a79d0f79f2b7 67 Pfam PF11553 Protein of unknown function (DUF3231) 4 62 2.7E-7 T 14-10-2018 IPR021617 Protein of unknown function DUF3231 Tph_c27150 190d2a4113acc2cca748a79d0f79f2b7 67 SUPERFAMILY SSF47240 8 62 1.35E-6 T 14-10-2018 IPR009078 Ferritin-like superfamily Tph_c27150 190d2a4113acc2cca748a79d0f79f2b7 67 Gene3D G3DSA:1.20.1260.10 9 66 5.4E-8 T 14-10-2018 IPR012347 Ferritin-like Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 SUPERFAMILY SSF54211 609 783 1.59E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 366 503 2.0E-22 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 SUPERFAMILY SSF52540 325 600 1.3E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 SMART SM00382 362 509 1.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 TIGRFAM TIGR00763 lon: endopeptidase La 26 785 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Hamap MF_01973 Lon protease [lon]. 25 786 73.989 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Gene3D G3DSA:2.30.130.40 20 130 8.7E-35 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 370 389 2.6E-56 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 740 758 2.6E-56 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 609 625 2.6E-56 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 687 706 2.6E-56 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 717 736 2.6E-56 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 690 698 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Gene3D G3DSA:3.40.50.300 328 505 3.1E-67 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 SMART SM00464 24 216 4.6E-72 T 14-10-2018 IPR003111 Lon, substrate-binding domain Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 25 216 1.1E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 PIRSF PIRSF001174 9 789 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 SUPERFAMILY SSF88697 25 215 2.73E-49 T 14-10-2018 IPR015947 PUA-like superfamily Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Gene3D G3DSA:1.10.8.60 506 598 1.2E-35 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Gene3D G3DSA:1.20.58.1480 137 259 1.1E-45 T 14-10-2018 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 583 785 1.4E-96 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tph_c04670 820c423c6ad01f9d06b13c48899f24c4 801 Gene3D G3DSA:3.30.230.10 607 795 9.1E-84 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 14 355 38.272 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 Gene3D G3DSA:3.20.20.70 12 358 2.8E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 Pfam PF01070 FMN-dependent dehydrogenase 186 349 1.0E-22 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 16 350 4.0E-115 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 SUPERFAMILY SSF51395 37 350 9.16E-72 T 14-10-2018 Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 SMART SM01240 35 361 8.3E-4 T 14-10-2018 Tph_c23830 712aba2a854a6a8be8c56814b7f9a2cf 378 PIRSF PIRSF003314 11 359 1.0E-115 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 Gene3D G3DSA:3.40.50.880 277 476 2.6E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 181 9.1E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 272 461 1.5E-35 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 SUPERFAMILY SSF52540 1 199 8.38E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 5 471 2.8E-129 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 3 462 42.678 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 Gene3D G3DSA:3.40.50.300 5 185 3.0E-25 T 14-10-2018 Tph_c08600 71085afebfb3f9d6151cc29fe6b5c396 481 SUPERFAMILY SSF52317 271 475 1.53E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Pfam PF13185 GAF domain 90 191 2.4E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Gene3D G3DSA:3.30.565.10 396 552 6.1E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 492 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 506 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 545 1.1E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 205 318 3.3E-9 T 14-10-2018 IPR000014 PAS domain Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Gene3D G3DSA:1.10.287.130 314 393 3.1E-22 T 14-10-2018 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 546 1.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 SUPERFAMILY SSF47384 323 392 1.04E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Pfam PF00512 His Kinase A (phospho-acceptor) domain 328 392 5.5E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Gene3D G3DSA:3.30.450.40 30 200 1.3E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 SUPERFAMILY SSF55874 384 546 9.17E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 SUPERFAMILY SSF55785 204 291 9.52E-12 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Pfam PF08448 PAS fold 211 313 9.9E-10 T 14-10-2018 IPR013656 PAS fold-4 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 Gene3D G3DSA:3.30.450.20 201 312 2.3E-19 T 14-10-2018 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 SMART SM00388 328 394 1.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 SUPERFAMILY SSF55781 21 191 1.66E-12 T 14-10-2018 Tph_c08190 6ead2bcd5d3efc0d976896130aa738e2 568 SMART SM00387 436 548 1.3E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c05530 0005e6622bcd1dc8d5828258138b794e 117 Pfam PF02643 Uncharacterized ACR, COG1430 15 111 7.4E-19 T 14-10-2018 IPR003795 Protein of unknown function DUF192 Tph_c05530 0005e6622bcd1dc8d5828258138b794e 117 Gene3D G3DSA:2.60.120.1140 2 115 4.7E-11 T 14-10-2018 IPR038695 Saro_0823-like superfamily Tph_c28000 175af457499409d6477b38db8e4533cb 368 SUPERFAMILY SSF51726 12 367 8.2E-46 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tph_c28000 175af457499409d6477b38db8e4533cb 368 Gene3D G3DSA:3.20.20.210 10 368 6.8E-61 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tph_c28000 175af457499409d6477b38db8e4533cb 368 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 141 367 1.0E-37 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Tph_c19540 d951413d633871afcf421156183d4466 368 Gene3D G3DSA:3.30.930.10 5 258 6.1E-51 T 14-10-2018 Tph_c19540 d951413d633871afcf421156183d4466 368 Gene3D G3DSA:3.30.390.50 260 350 1.3E-23 T 14-10-2018 Tph_c19540 d951413d633871afcf421156183d4466 368 SUPERFAMILY SSF82649 265 350 1.83E-5 T 14-10-2018 Tph_c19540 d951413d633871afcf421156183d4466 368 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 267 348 1.8E-5 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Tph_c19540 d951413d633871afcf421156183d4466 368 SUPERFAMILY SSF55681 4 253 6.39E-60 T 14-10-2018 Tph_c01040 3a3186048f0482a760d0642bcfdb914b 150 Gene3D G3DSA:2.40.30.70 1 138 2.1E-45 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily Tph_c01040 3a3186048f0482a760d0642bcfdb914b 150 Pfam PF01980 Uncharacterised protein family UPF0066 15 126 4.9E-33 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain Tph_c01040 3a3186048f0482a760d0642bcfdb914b 150 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 131 1.9E-44 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain Tph_c01040 3a3186048f0482a760d0642bcfdb914b 150 SUPERFAMILY SSF118196 2 138 5.23E-46 T 14-10-2018 IPR036413 YaeB-like superfamily Tph_c01040 3a3186048f0482a760d0642bcfdb914b 150 ProSitePatterns PS01318 TsaA-like domain signature. 74 85 - T 14-10-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 4.8E-114 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 67.109 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 Gene3D G3DSA:3.40.50.1970 1 173 2.8E-61 T 14-10-2018 Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 SUPERFAMILY SSF56796 6 357 7.33E-111 T 14-10-2018 Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 PIRSF PIRSF001455 4 359 1.1E-105 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 Gene3D G3DSA:1.20.1090.10 174 360 1.9E-63 T 14-10-2018 Tph_c16670 f901cb58edd2b0eac3b9a028b5160887 360 Pfam PF01761 3-dehydroquinate synthase 70 324 1.9E-100 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Tph_c22120 6e2bb832125a3a37844397fb869e3b37 242 Pfam PF00005 ABC transporter 19 167 5.4E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c22120 6e2bb832125a3a37844397fb869e3b37 242 Gene3D G3DSA:3.40.50.300 1 242 3.9E-81 T 14-10-2018 Tph_c22120 6e2bb832125a3a37844397fb869e3b37 242 SMART SM00382 28 215 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c22120 6e2bb832125a3a37844397fb869e3b37 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c22120 6e2bb832125a3a37844397fb869e3b37 242 PIRSF PIRSF039085 1 242 6.1E-116 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 Tph_c22120 6e2bb832125a3a37844397fb869e3b37 242 SUPERFAMILY SSF52540 3 237 5.7E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25440 86564abf9bf1bad87f62436386092d11 315 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 315 1.5E-133 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 232 242 4.8E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 56 70 4.8E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 129 143 4.8E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 294 305 4.8E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00102 Ornithine carbamoyltransferase signature 89 102 4.8E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 SUPERFAMILY SSF53671 9 315 1.7E-111 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 Gene3D G3DSA:3.40.50.1370 14 312 4.2E-128 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 153 2.8E-51 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 315 81.992 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 160 314 9.4E-62 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 58 77 6.9E-30 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 303 6.9E-30 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 6.9E-30 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 6.9E-30 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 58 65 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Tph_c25440 86564abf9bf1bad87f62436386092d11 315 Gene3D G3DSA:3.40.50.1370 143 302 4.2E-128 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Tph_c22850 0335fa62fea3e93bc7944edc6ea0a8f2 336 SMART SM00849 94 289 1.2E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c22850 0335fa62fea3e93bc7944edc6ea0a8f2 336 SUPERFAMILY SSF56281 85 331 9.96E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c22850 0335fa62fea3e93bc7944edc6ea0a8f2 336 Pfam PF00753 Metallo-beta-lactamase superfamily 91 288 3.7E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c22850 0335fa62fea3e93bc7944edc6ea0a8f2 336 Gene3D G3DSA:3.60.15.10 85 331 1.2E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c17370 0e5ec747ca952138d6674eb95f65d90d 224 Pfam PF01694 Rhomboid family 69 219 1.1E-37 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 Tph_c17370 0e5ec747ca952138d6674eb95f65d90d 224 SUPERFAMILY SSF144091 10 222 2.09E-40 T 14-10-2018 Tph_c17370 0e5ec747ca952138d6674eb95f65d90d 224 Gene3D G3DSA:1.20.1540.10 9 223 1.4E-28 T 14-10-2018 IPR035952 Rhomboid-like superfamily Tph_c17690 395ff8a15a1d59b42512fcf75f9f864b 63 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 47 4.6E-20 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c17690 395ff8a15a1d59b42512fcf75f9f864b 63 Pfam PF09723 Zinc ribbon domain 1 41 2.1E-17 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c17690 395ff8a15a1d59b42512fcf75f9f864b 63 SMART SM00834 1 42 2.4E-17 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 SUPERFAMILY SSF53850 89 297 3.8E-47 T 14-10-2018 Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 Gene3D G3DSA:3.40.190.290 92 298 4.6E-48 T 14-10-2018 Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 Gene3D G3DSA:1.10.10.10 1 91 3.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 Pfam PF03466 LysR substrate binding domain 89 295 3.6E-51 T 14-10-2018 IPR005119 LysR, substrate-binding Tph_c09500 0d76fff9887a12afaee0d1a3102c9a30 299 SUPERFAMILY SSF46785 1 111 2.65E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c00370 0782f3e09bccdc6701743ce482b90676 253 Gene3D G3DSA:3.40.50.7700 120 252 1.4E-38 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tph_c00370 0782f3e09bccdc6701743ce482b90676 253 SUPERFAMILY SSF52255 120 251 2.22E-32 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Tph_c00370 0782f3e09bccdc6701743ce482b90676 253 SMART SM01001 119 251 3.8E-44 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tph_c00370 0782f3e09bccdc6701743ce482b90676 253 Pfam PF00731 AIR carboxylase 121 250 6.8E-19 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Tph_c01750 9bd6a8e177c0d51a56d367b98e2ae0b1 210 Pfam PF12804 MobA-like NTP transferase domain 5 151 2.6E-33 T 14-10-2018 IPR025877 MobA-like NTP transferase Tph_c01750 9bd6a8e177c0d51a56d367b98e2ae0b1 210 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 189 25.157 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Tph_c01750 9bd6a8e177c0d51a56d367b98e2ae0b1 210 SUPERFAMILY SSF53448 1 186 1.17E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c01750 9bd6a8e177c0d51a56d367b98e2ae0b1 210 Gene3D G3DSA:3.90.550.10 6 205 9.8E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c15160 1bc5153c36d3331b4e86201c33f2ca3a 443 Gene3D G3DSA:3.20.20.20 1 313 4.5E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c15160 1bc5153c36d3331b4e86201c33f2ca3a 443 Pfam PF04060 Putative Fe-S cluster 12 44 4.0E-15 T 14-10-2018 IPR007202 4Fe-4S domain GO:0051536 Tph_c15160 1bc5153c36d3331b4e86201c33f2ca3a 443 PIRSF PIRSF000376 1 442 5.9E-150 T 14-10-2018 IPR016218 Acetyl-CoA decarbonylase/synthase complex, gamma subunit GO:0005506|GO:0008168|GO:0046356 Tph_c15160 1bc5153c36d3331b4e86201c33f2ca3a 443 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 64 436 8.3E-107 T 14-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel Tph_c15160 1bc5153c36d3331b4e86201c33f2ca3a 443 Gene3D G3DSA:3.40.50.11600 314 442 1.0E-46 T 14-10-2018 Tph_c15160 1bc5153c36d3331b4e86201c33f2ca3a 443 SUPERFAMILY SSF51717 119 269 1.02E-9 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 Gene3D G3DSA:2.30.33.40 1 94 1.7E-40 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 SMART SM00883 1 93 2.8E-56 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 25.862 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 SUPERFAMILY SSF50129 1 93 6.47E-35 T 14-10-2018 IPR011032 GroES-like superfamily Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 PRINTS PR00297 10kDa chaperonin signature 59 71 7.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 PRINTS PR00297 10kDa chaperonin signature 80 93 7.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 PRINTS PR00297 10kDa chaperonin signature 24 45 7.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 PRINTS PR00297 10kDa chaperonin signature 2 17 7.7E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c04010 44cc9b0983d4bf1392f6a5b80a180444 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 92 3.2E-36 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Tph_c22240 552489de7943407e22cf8f6a815734d3 251 Gene3D G3DSA:3.40.50.880 13 220 3.0E-8 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c22240 552489de7943407e22cf8f6a815734d3 251 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 4 210 1.7E-40 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Tph_c22240 552489de7943407e22cf8f6a815734d3 251 SUPERFAMILY SSF52317 16 205 3.87E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 SUPERFAMILY SSF53383 9 429 1.69E-129 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 Pfam PF00202 Aminotransferase class-III 31 425 2.6E-110 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 Gene3D G3DSA:3.90.1150.10 36 418 1.2E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 Gene3D G3DSA:3.40.640.10 65 325 1.2E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 PIRSF PIRSF000521 124 429 1.0E-42 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c22330 fd38f2218144def9ef4457a2e793b15e 431 PIRSF PIRSF000521 25 135 4.0E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c26760 f9b05d5b2cceda7c12bee0dfa09349e4 406 Gene3D G3DSA:3.20.20.20 129 405 2.6E-110 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c26760 f9b05d5b2cceda7c12bee0dfa09349e4 406 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 149 164 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c26760 f9b05d5b2cceda7c12bee0dfa09349e4 406 Pfam PF00809 Pterin binding enzyme 150 387 9.7E-85 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c26760 f9b05d5b2cceda7c12bee0dfa09349e4 406 SUPERFAMILY SSF51717 135 404 1.26E-99 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c26760 f9b05d5b2cceda7c12bee0dfa09349e4 406 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 149 401 1.4E-94 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Tph_c26760 f9b05d5b2cceda7c12bee0dfa09349e4 406 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 183 196 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c15440 0d479dd6a220d2da7e11639364c3a986 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 197 31.807 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Tph_c15440 0d479dd6a220d2da7e11639364c3a986 197 Pfam PF02441 Flavoprotein 4 180 1.8E-21 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tph_c15440 0d479dd6a220d2da7e11639364c3a986 197 SUPERFAMILY SSF52507 4 193 9.03E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c15440 0d479dd6a220d2da7e11639364c3a986 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 5 194 6.0E-59 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like Tph_c15440 0d479dd6a220d2da7e11639364c3a986 197 Gene3D G3DSA:3.40.50.1950 2 195 5.8E-69 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c24070 d98c7e566ea6dc600bd0c370dbdb9412 554 Pfam PF00890 FAD binding domain 69 520 1.3E-53 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c24070 d98c7e566ea6dc600bd0c370dbdb9412 554 Gene3D G3DSA:3.90.700.10 331 484 1.4E-111 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c24070 d98c7e566ea6dc600bd0c370dbdb9412 554 SUPERFAMILY SSF56425 348 493 2.38E-29 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c24070 d98c7e566ea6dc600bd0c370dbdb9412 554 SUPERFAMILY SSF51905 52 552 1.27E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c24070 d98c7e566ea6dc600bd0c370dbdb9412 554 Gene3D G3DSA:3.50.50.60 68 547 1.4E-111 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c28350 a3a50859407a6675353a964c8557a3bc 85 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 85 24.951 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Tph_c28350 a3a50859407a6675353a964c8557a3bc 85 Pfam PF04026 SpoVG 2 83 1.3E-36 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 Tph_c28350 a3a50859407a6675353a964c8557a3bc 85 Gene3D G3DSA:3.30.1120.40 1 85 4.4E-37 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Tph_c28350 a3a50859407a6675353a964c8557a3bc 85 SUPERFAMILY SSF160537 2 84 3.79E-32 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 Tph_c04940 196f89979847366c29f1545c3e9b5d79 238 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 1 208 31.667 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tph_c04940 196f89979847366c29f1545c3e9b5d79 238 Gene3D G3DSA:3.30.1360.170 1 202 1.3E-70 T 14-10-2018 Tph_c04940 196f89979847366c29f1545c3e9b5d79 238 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 4 198 6.3E-61 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tph_c04940 196f89979847366c29f1545c3e9b5d79 238 SUPERFAMILY SSF69796 2 206 3.92E-68 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tph_c04940 196f89979847366c29f1545c3e9b5d79 238 Pfam PF02511 Thymidylate synthase complementing protein 6 194 1.8E-72 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 Gene3D G3DSA:3.40.50.300 1 218 2.8E-60 T 14-10-2018 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 ProSitePatterns PS00211 ABC transporters family signature. 373 387 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 Gene3D G3DSA:3.40.50.300 224 467 2.2E-55 T 14-10-2018 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 Pfam PF00005 ABC transporter 1 145 3.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 Pfam PF00005 ABC transporter 254 400 1.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 SUPERFAMILY SSF52540 1 206 2.06E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 ProSitePatterns PS00211 ABC transporters family signature. 117 131 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 SMART SM00382 3 194 1.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 SMART SM00382 263 470 2.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c04360 34572ad81c5f213c7b6516ae27fbd55b 485 SUPERFAMILY SSF52540 236 460 4.53E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05050 1e97903694622f6ba48cc61380391834 95 SUPERFAMILY SSF52738 3 84 7.98E-22 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Tph_c05050 1e97903694622f6ba48cc61380391834 95 Gene3D G3DSA:3.40.50.180 1 83 2.2E-20 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Tph_c05050 1e97903694622f6ba48cc61380391834 95 Pfam PF01339 CheB methylesterase 1 78 2.8E-19 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Tph_c12510 b3013d75b2839fe2013c81335d9fd77e 433 PIRSF PIRSF006444 1 433 1.1E-211 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Tph_c12510 b3013d75b2839fe2013c81335d9fd77e 433 Gene3D G3DSA:3.30.300.30 327 433 7.7E-36 T 14-10-2018 Tph_c12510 b3013d75b2839fe2013c81335d9fd77e 433 Pfam PF00501 AMP-binding enzyme 91 286 1.0E-12 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tph_c12510 b3013d75b2839fe2013c81335d9fd77e 433 Gene3D G3DSA:3.40.50.12780 2 326 5.1E-128 T 14-10-2018 Tph_c12510 b3013d75b2839fe2013c81335d9fd77e 433 SUPERFAMILY SSF56801 15 401 6.02E-63 T 14-10-2018 Tph_c12510 b3013d75b2839fe2013c81335d9fd77e 433 Pfam PF14535 AMP-binding enzyme C-terminal domain 335 431 3.1E-34 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal Tph_c20720 d879d44727f13c1a6e838af85628256e 97 Pfam PF14104 Domain of unknown function (DUF4277) 2 83 4.9E-8 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 SUPERFAMILY SSF50129 1 182 7.52E-53 T 14-10-2018 IPR011032 GroES-like superfamily Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 3.5E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 Gene3D G3DSA:3.40.50.720 160 296 3.7E-107 T 14-10-2018 Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 70 84 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 SUPERFAMILY SSF51735 147 314 5.3E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 Gene3D G3DSA:3.90.180.10 8 331 3.7E-107 T 14-10-2018 Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 Pfam PF00107 Zinc-binding dehydrogenase 184 308 2.3E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Tph_c19660 8d6b03064e0b2b2bae7bcc21dfbc600f 352 SMART SM00829 8 349 6.4E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 Gene3D G3DSA:1.20.1640.10 246 425 1.2E-14 T 14-10-2018 Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 151 416 8.3E-106 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 Pfam PF02355 Protein export membrane protein 249 413 1.3E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 Gene3D G3DSA:3.30.1360.200 111 245 4.3E-35 T 14-10-2018 Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 32 430 39.474 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 SUPERFAMILY SSF82866 165 422 7.72E-47 T 14-10-2018 Tph_c12410 d662dc3cc8a37e3653be84814f837287 434 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 179 410 5.0E-77 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Tph_c24790 53bab822bc8a67f031c0ec0cac3cf927 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c24790 53bab822bc8a67f031c0ec0cac3cf927 183 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c24790 53bab822bc8a67f031c0ec0cac3cf927 183 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 2.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c24790 53bab822bc8a67f031c0ec0cac3cf927 183 ProSitePatterns PS01081 TetR-type HTH domain signature. 19 50 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Tph_c24790 53bab822bc8a67f031c0ec0cac3cf927 183 SUPERFAMILY SSF46689 3 74 1.51E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c24790 53bab822bc8a67f031c0ec0cac3cf927 183 Gene3D G3DSA:1.10.357.10 2 183 1.0E-24 T 14-10-2018 Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 SUPERFAMILY SSF48239 37 309 5.23E-35 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 Gene3D G3DSA:1.50.10.20 191 327 1.2E-14 T 14-10-2018 Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 SUPERFAMILY SSF55383 357 384 3.66E-5 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 Pfam PF07833 Copper amine oxidase N-terminal domain 334 384 4.8E-6 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 Pfam PF07833 Copper amine oxidase N-terminal domain 368 462 4.9E-28 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 Gene3D G3DSA:3.30.457.10 386 463 1.9E-14 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c03250 5292648e56777ea0a33c734c1d8b7308 464 SUPERFAMILY SSF55383 389 455 4.32E-19 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 Gene3D G3DSA:3.30.460.10 11 142 1.9E-15 T 14-10-2018 Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 TIGRFAM TIGR00277 HDIG: HDIG domain 257 307 1.7E-7 T 14-10-2018 IPR006675 HDIG domain Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 SUPERFAMILY SSF81891 142 442 6.15E-47 T 14-10-2018 Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 179 237 2.2E-11 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 302 438 4.7E-13 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 Gene3D G3DSA:1.10.3090.10 143 433 1.0E-41 T 14-10-2018 Tph_c22830 6b9f4ab44a225880e0da74d5b28e47db 470 SUPERFAMILY SSF81301 11 131 4.69E-11 T 14-10-2018 Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 Gene3D G3DSA:1.10.10.10 5 71 2.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 SMART SM00895 79 200 1.3E-15 T 14-10-2018 IPR011711 GntR, C-terminal Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 SMART SM00345 11 69 1.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 8.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 SUPERFAMILY SSF46785 6 73 4.25E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 Gene3D G3DSA:1.20.120.530 72 214 1.2E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 SUPERFAMILY SSF48008 75 207 1.23E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Tph_c23950 ef36de1c66a2132668b02baae2bb5632 217 Pfam PF07729 FCD domain 79 199 1.1E-25 T 14-10-2018 IPR011711 GntR, C-terminal Tph_c25800 680e095a979cdff00273205451bfc08e 113 SUPERFAMILY SSF54843 2 111 7.46E-46 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25800 680e095a979cdff00273205451bfc08e 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.1E-44 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c25800 680e095a979cdff00273205451bfc08e 113 Gene3D G3DSA:3.90.470.10 1 113 6.9E-52 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Tph_c25800 680e095a979cdff00273205451bfc08e 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25800 680e095a979cdff00273205451bfc08e 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.5E-38 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Tph_c25800 680e095a979cdff00273205451bfc08e 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 31.046 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c05590 013086c683563d53452807b4acfbd797 457 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 19 421 5.0E-37 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Tph_c05590 013086c683563d53452807b4acfbd797 457 Gene3D G3DSA:1.10.4160.10 15 439 3.1E-35 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Tph_c05590 013086c683563d53452807b4acfbd797 457 PIRSF PIRSF002744 1 446 9.4E-123 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 Tph_c09040 9dcccd8965a0309392a58cd8d0b5e27c 419 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 246 410 3.7E-34 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Tph_c09040 9dcccd8965a0309392a58cd8d0b5e27c 419 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 8 412 2.0E-72 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Tph_c09040 9dcccd8965a0309392a58cd8d0b5e27c 419 Gene3D G3DSA:3.30.300.210 261 414 3.5E-35 T 14-10-2018 IPR038501 Spore germination GerAC superfamily Tph_c01970 d92d16c715f2061b34b2d06e8d7d0052 158 SUPERFAMILY SSF88723 14 134 1.54E-18 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c01970 d92d16c715f2061b34b2d06e8d7d0052 158 Gene3D G3DSA:3.40.50.1010 15 136 8.0E-24 T 14-10-2018 Tph_c01970 d92d16c715f2061b34b2d06e8d7d0052 158 Pfam PF01850 PIN domain 16 133 7.1E-11 T 14-10-2018 IPR002716 PIN domain Tph_c23890 8f76f2ce20b258b7ee1d0b8996e9b9c4 304 SUPERFAMILY SSF103481 38 139 3.01E-15 T 14-10-2018 Tph_c23890 8f76f2ce20b258b7ee1d0b8996e9b9c4 304 Pfam PF00892 EamA-like transporter family 4 135 6.9E-25 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c23890 8f76f2ce20b258b7ee1d0b8996e9b9c4 304 Pfam PF00892 EamA-like transporter family 151 286 8.2E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c23890 8f76f2ce20b258b7ee1d0b8996e9b9c4 304 SUPERFAMILY SSF103481 189 288 2.09E-16 T 14-10-2018 Tph_c10230 d311119da0f697432414e5d4e2572ead 104 Gene3D G3DSA:3.30.1320.10 1 103 7.8E-37 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10230 d311119da0f697432414e5d4e2572ead 104 Pfam PF00886 Ribosomal protein S16 9 67 1.1E-25 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10230 d311119da0f697432414e5d4e2572ead 104 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c10230 d311119da0f697432414e5d4e2572ead 104 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.561 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10230 d311119da0f697432414e5d4e2572ead 104 SUPERFAMILY SSF54565 3 93 2.75E-36 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c10230 d311119da0f697432414e5d4e2572ead 104 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 80 7.6E-35 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26410 870a894953856865acd56b3bb7c15c72 234 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 219 7.2E-76 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 Tph_c26410 870a894953856865acd56b3bb7c15c72 234 Gene3D G3DSA:1.10.3720.10 1 223 7.2E-63 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c26410 870a894953856865acd56b3bb7c15c72 234 SUPERFAMILY SSF161098 5 217 1.83E-52 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c26410 870a894953856865acd56b3bb7c15c72 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 212 1.0E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c13820 1cf164cac58bf67f6a53cba3ef9e458f 328 Pfam PF09084 NMT1/THI5 like 49 262 3.1E-25 T 14-10-2018 IPR015168 SsuA/THI5-like Tph_c13820 1cf164cac58bf67f6a53cba3ef9e458f 328 Gene3D G3DSA:3.40.190.10 147 327 4.7E-30 T 14-10-2018 Tph_c13820 1cf164cac58bf67f6a53cba3ef9e458f 328 SMART SM00062 40 260 4.5E-4 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tph_c13820 1cf164cac58bf67f6a53cba3ef9e458f 328 Gene3D G3DSA:3.40.190.10 35 138 9.8E-15 T 14-10-2018 Tph_c13820 1cf164cac58bf67f6a53cba3ef9e458f 328 SUPERFAMILY SSF53850 39 263 6.44E-36 T 14-10-2018 Tph_c26490 6fe55f32845de0626b062d2aa417e26b 271 SUPERFAMILY SSF51366 4 265 9.23E-86 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c26490 6fe55f32845de0626b062d2aa417e26b 271 Gene3D G3DSA:3.20.20.70 1 270 2.1E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26490 6fe55f32845de0626b062d2aa417e26b 271 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 16 265 35.987 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26490 6fe55f32845de0626b062d2aa417e26b 271 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 12 263 1.9E-77 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26490 6fe55f32845de0626b062d2aa417e26b 271 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 50 63 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c26490 6fe55f32845de0626b062d2aa417e26b 271 Pfam PF00290 Tryptophan synthase alpha chain 12 266 9.0E-88 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Tph_c28170 18a632654215be192626032674a1cb3c 263 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 1.1E-62 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Tph_c28170 18a632654215be192626032674a1cb3c 263 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 238 1.2E-50 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 Tph_c28170 18a632654215be192626032674a1cb3c 263 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 7 247 57.44 T 14-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 Gene3D G3DSA:3.40.50.150 4 258 8.3E-40 T 14-10-2018 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 PIRSF PIRSF000398 1 290 3.2E-34 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 Gene3D G3DSA:1.10.1020.10 57 180 8.3E-40 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 1.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 7 23 1.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 200 212 1.3E-10 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 SUPERFAMILY SSF53335 2 286 3.49E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c07190 a8f933191c80e94bf36893462b9f9ff1 311 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 7 261 4.9E-26 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 Tph_c02110 84ebe95b3bc7b9afa6b0b676438c39bd 81 Pfam PF04255 Protein of unknown function (DUF433) 8 62 6.4E-28 T 14-10-2018 IPR007367 Protein of unknown function DUF433 Tph_c02110 84ebe95b3bc7b9afa6b0b676438c39bd 81 Gene3D G3DSA:1.10.10.10 7 75 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c02110 84ebe95b3bc7b9afa6b0b676438c39bd 81 SUPERFAMILY SSF46689 3 74 3.76E-25 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 Pfam PF00970 Oxidoreductase FAD-binding domain 23 100 1.3E-4 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 Gene3D G3DSA:2.10.240.10 220 258 3.4E-14 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 Gene3D G3DSA:2.40.30.10 5 100 7.2E-30 T 14-10-2018 Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 SUPERFAMILY SSF52343 97 258 1.15E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 220 257 5.2E-15 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 SUPERFAMILY SSF63380 7 102 4.12E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 Gene3D G3DSA:3.40.50.80 103 211 2.1E-18 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 PIRSF PIRSF006816 4 261 3.6E-64 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 Tph_c14440 33b3dd8bb7a6e3abed32f2fe503b02e4 261 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 6 259 33.88 T 14-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit Tph_c27480 ff10142ed65e5592e530a245000676d5 169 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 118 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Tph_c27480 ff10142ed65e5592e530a245000676d5 169 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 123 3.1E-27 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Tph_c27480 ff10142ed65e5592e530a245000676d5 169 Gene3D G3DSA:3.40.140.10 2 153 9.4E-48 T 14-10-2018 Tph_c27480 ff10142ed65e5592e530a245000676d5 169 PIRSF PIRSF006019 1 157 9.0E-55 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Tph_c27480 ff10142ed65e5592e530a245000676d5 169 SUPERFAMILY SSF53927 7 147 2.6E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 Gene3D G3DSA:1.10.520.20 5 98 3.0E-13 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 SUPERFAMILY SSF47928 4 106 3.4E-22 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 20.464 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.9E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 PRINTS PR00125 ATP synthase delta subunit signature 6 25 3.9E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 PRINTS PR00125 ATP synthase delta subunit signature 75 86 3.9E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.9E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 PRINTS PR00125 ATP synthase delta subunit signature 86 100 3.9E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 174 3.6E-52 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c27400 8fa24131c33c6cef28bc30eddcbb3dd8 188 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 172 4.0E-41 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 SMART SM01018 6 89 2.7E-9 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 Gene3D G3DSA:3.40.50.280 84 215 2.0E-44 T 14-10-2018 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 SUPERFAMILY SSF52242 78 213 4.06E-40 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 SUPERFAMILY SSF47644 4 84 3.79E-14 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 Gene3D G3DSA:1.10.1240.10 5 83 3.2E-14 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 Pfam PF02310 B12 binding domain 92 195 2.4E-24 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c20130 4090e2c0470f68a8cd943edbe3fad89a 216 Pfam PF02607 B12 binding domain 11 82 1.9E-12 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20900 45e641975daec83fadf4afb8fff17684 190 Pfam PF05067 Manganese containing catalase 1 182 6.9E-59 T 14-10-2018 IPR007760 Manganese catalase Tph_c20900 45e641975daec83fadf4afb8fff17684 190 Gene3D G3DSA:1.20.1260.10 1 187 2.4E-64 T 14-10-2018 IPR012347 Ferritin-like Tph_c20900 45e641975daec83fadf4afb8fff17684 190 SUPERFAMILY SSF47240 1 189 2.84E-71 T 14-10-2018 IPR009078 Ferritin-like superfamily Tph_c07650 89f837ec931a8998ce92c59e68d6fb57 197 SUPERFAMILY SSF47240 4 153 2.58E-41 T 14-10-2018 IPR009078 Ferritin-like superfamily Tph_c07650 89f837ec931a8998ce92c59e68d6fb57 197 SUPERFAMILY SSF57802 154 196 6.71E-12 T 14-10-2018 Tph_c07650 89f837ec931a8998ce92c59e68d6fb57 197 Pfam PF02915 Rubrerythrin 11 144 1.5E-32 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tph_c07650 89f837ec931a8998ce92c59e68d6fb57 197 Gene3D G3DSA:2.20.28.10 153 197 4.6E-20 T 14-10-2018 Tph_c07650 89f837ec931a8998ce92c59e68d6fb57 197 Gene3D G3DSA:1.20.1260.10 1 152 3.5E-55 T 14-10-2018 IPR012347 Ferritin-like Tph_c16860 a702b4fa755c3e2198123cf6d0912723 549 Pfam PF03717 Penicillin-binding Protein dimerisation domain 34 182 8.5E-6 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Tph_c16860 a702b4fa755c3e2198123cf6d0912723 549 SUPERFAMILY SSF56519 24 207 2.35E-14 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Tph_c16860 a702b4fa755c3e2198123cf6d0912723 549 Pfam PF00905 Penicillin binding protein transpeptidase domain 244 544 2.4E-53 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tph_c16860 a702b4fa755c3e2198123cf6d0912723 549 Gene3D G3DSA:3.40.710.10 221 548 2.6E-86 T 14-10-2018 Tph_c16860 a702b4fa755c3e2198123cf6d0912723 549 Gene3D G3DSA:3.90.1310.30 23 220 5.2E-14 T 14-10-2018 Tph_c16860 a702b4fa755c3e2198123cf6d0912723 549 SUPERFAMILY SSF56601 168 548 9.63E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c09780 3c37b9f305f9ee41439c65d53e007c4a 268 Pfam PF02361 Cobalt transport protein 16 227 5.3E-37 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tph_c09780 3c37b9f305f9ee41439c65d53e007c4a 268 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 22 223 1.0E-43 T 14-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Tph_c13560 409c2cb1b42bc9130d9927de5a51eb6a 437 Pfam PF07833 Copper amine oxidase N-terminal domain 56 135 4.4E-14 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c13560 409c2cb1b42bc9130d9927de5a51eb6a 437 Pfam PF07833 Copper amine oxidase N-terminal domain 112 168 1.2E-6 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c13560 409c2cb1b42bc9130d9927de5a51eb6a 437 Gene3D G3DSA:3.30.457.10 52 126 2.9E-8 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c13560 409c2cb1b42bc9130d9927de5a51eb6a 437 SUPERFAMILY SSF55383 53 131 8.11E-14 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 SUPERFAMILY SSF63867 319 395 7.33E-11 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 SUPERFAMILY SSF53218 173 315 1.83E-25 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Gene3D G3DSA:3.40.980.10 171 319 9.3E-89 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Gene3D G3DSA:3.90.105.10 24 170 9.3E-89 T 14-10-2018 Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Gene3D G3DSA:2.170.190.11 47 137 9.3E-89 T 14-10-2018 Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Gene3D G3DSA:2.40.340.10 320 389 9.3E-89 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 SUPERFAMILY SSF63882 3 172 2.88E-43 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Pfam PF00994 Probable molybdopterin binding domain 176 310 1.7E-13 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Pfam PF03454 MoeA C-terminal region (domain IV) 324 394 2.8E-6 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 SMART SM00852 176 311 5.0E-11 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c27310 5f2a344c1e185bcdfb30183f16d3827d 397 Pfam PF03453 MoeA N-terminal region (domain I and II) 6 163 3.5E-34 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 212 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 PIRSF PIRSF005572 1 382 3.5E-61 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 4 378 2.8E-150 T 14-10-2018 IPR010969 Cysteine desulfurase-related, unknown function Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 Pfam PF00266 Aminotransferase class-V 4 370 8.4E-94 T 14-10-2018 IPR000192 Aminotransferase class V domain Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 Gene3D G3DSA:3.40.640.10 18 268 2.3E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 SUPERFAMILY SSF53383 4 379 2.39E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c09490 196574be7ac0b498c6976df985ffafd9 382 Gene3D G3DSA:3.90.1150.10 4 372 2.3E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c19080 210732b84057806f260113cc01676b05 521 SUPERFAMILY SSF56801 3 514 9.68E-143 T 14-10-2018 Tph_c19080 210732b84057806f260113cc01676b05 521 Gene3D G3DSA:3.40.50.12780 1 413 1.8E-107 T 14-10-2018 Tph_c19080 210732b84057806f260113cc01676b05 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 169 180 - T 14-10-2018 IPR020845 AMP-binding, conserved site Tph_c19080 210732b84057806f260113cc01676b05 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 429 502 2.8E-14 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Tph_c19080 210732b84057806f260113cc01676b05 521 Pfam PF00501 AMP-binding enzyme 8 420 1.4E-95 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tph_c19080 210732b84057806f260113cc01676b05 521 Gene3D G3DSA:3.30.300.310 416 517 5.9E-29 T 14-10-2018 Tph_c12070 fb4990b7e5f4c9ad2928d556ce52a5de 114 Pfam PF14076 Domain of unknown function (DUF4258) 26 95 4.0E-13 T 14-10-2018 IPR025354 Protein of unknown function DUF4258 Tph_c06900 e69626306f5a4f1547b4b86a1116596c 168 SMART SM00382 6 141 0.0065 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c06900 e69626306f5a4f1547b4b86a1116596c 168 Gene3D G3DSA:3.40.50.300 1 160 5.3E-16 T 14-10-2018 Tph_c06900 e69626306f5a4f1547b4b86a1116596c 168 SUPERFAMILY SSF52540 4 146 4.79E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c06900 e69626306f5a4f1547b4b86a1116596c 168 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 8 145 2.6E-35 T 14-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Tph_c06900 e69626306f5a4f1547b4b86a1116596c 168 PIRSF PIRSF036409 7 152 6.7E-36 T 14-10-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 Gene3D G3DSA:3.40.50.700 29 221 1.7E-72 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 3 346 3.1E-85 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 50 203 2.6E-34 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 Gene3D G3DSA:4.10.480.10 224 330 1.9E-29 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 35 57 1.3E-37 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 58 82 1.3E-37 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 183 206 1.3E-37 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 150 174 1.3E-37 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 227 245 1.3E-37 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 209 226 1.3E-37 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 222 300 4.2E-27 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 SUPERFAMILY SSF56770 40 301 6.67E-80 T 14-10-2018 Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 32 1.2E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal Tph_c06350 6029edd5c3a9d79131d2bc8985f46f15 355 PIRSF PIRSF000310 1 348 2.3E-124 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 Tph_c03440 2aa470995a28b3e21fb09f26eb38121f 1238 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 49 1226 2.9E-297 T 14-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 Tph_c03440 2aa470995a28b3e21fb09f26eb38121f 1238 TIGRFAM TIGR02025 BchH: magnesium chelatase, H subunit 112 1231 4.8E-251 T 14-10-2018 IPR011771 Magnesium-chelatase, subunit H GO:0015995|GO:0016851 KEGG: 00860+6.6.1.1|MetaCyc: PWY-5531|MetaCyc: PWY-7159 Tph_c03440 2aa470995a28b3e21fb09f26eb38121f 1238 Pfam PF02514 CobN/Magnesium Chelatase 112 1215 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Tph_c02590 9b20ca3c91175906c18ac5d8e5b72966 133 SMART SM01321 10 129 3.3E-46 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tph_c02590 9b20ca3c91175906c18ac5d8e5b72966 133 Pfam PF01797 Transposase IS200 like 10 129 1.1E-42 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 Tph_c02590 9b20ca3c91175906c18ac5d8e5b72966 133 Gene3D G3DSA:3.30.70.1290 1 133 1.7E-48 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tph_c02590 9b20ca3c91175906c18ac5d8e5b72966 133 SUPERFAMILY SSF143422 2 130 1.31E-48 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 Tph_c24030 c3848fb850677faad64959609e715453 163 Pfam PF01909 Nucleotidyltransferase domain 10 59 9.5E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c24030 c3848fb850677faad64959609e715453 163 SUPERFAMILY SSF81301 3 125 8.94E-20 T 14-10-2018 Tph_c24030 c3848fb850677faad64959609e715453 163 Gene3D G3DSA:3.30.460.10 3 128 3.1E-26 T 14-10-2018 Tph_c20190 03ec431895efbe08d0d210b0ed9b936f 219 SUPERFAMILY SSF161098 19 203 1.44E-39 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c20190 03ec431895efbe08d0d210b0ed9b936f 219 Gene3D G3DSA:1.10.3720.10 15 213 3.7E-36 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c20190 03ec431895efbe08d0d210b0ed9b936f 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 213 9.9E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 SUPERFAMILY SSF53335 20 311 1.97E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 Gene3D G3DSA:3.40.50.150 20 309 1.6E-107 T 14-10-2018 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 Pfam PF01795 MraW methylase family 18 310 2.6E-110 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 17 310 9.5E-101 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 20 311 38.739 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 Gene3D G3DSA:1.10.150.170 127 231 1.6E-107 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 SUPERFAMILY SSF81799 129 230 5.62E-37 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Tph_c12560 d4e8bd8226da6c4033be19a43bb82278 315 PIRSF PIRSF004486 15 312 6.1E-106 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Tph_c07850 a4e3598688385834dd3a121387c096a6 536 Pfam PF13408 Recombinase zinc beta ribbon domain 328 381 3.5E-11 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c07850 a4e3598688385834dd3a121387c096a6 536 SUPERFAMILY SSF53041 38 188 2.75E-33 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c07850 a4e3598688385834dd3a121387c096a6 536 Pfam PF07508 Recombinase 208 315 1.3E-23 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c07850 a4e3598688385834dd3a121387c096a6 536 Gene3D G3DSA:1.10.10.2600 174 317 2.4E-23 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c07850 a4e3598688385834dd3a121387c096a6 536 SMART SM00857 39 188 1.4E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c07850 a4e3598688385834dd3a121387c096a6 536 Gene3D G3DSA:3.40.50.1390 32 169 1.6E-47 T 14-10-2018 Tph_c07850 a4e3598688385834dd3a121387c096a6 536 Pfam PF00239 Resolvase, N terminal domain 39 186 2.3E-30 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 SMART SM00490 503 583 2.0E-24 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 Pfam PF13020 Domain of unknown function (DUF3883) 995 1082 1.2E-20 T 14-10-2018 IPR024975 Domain of unknown function DUF3883 Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 SMART SM00487 105 306 2.2E-20 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 SUPERFAMILY SSF52540 225 621 4.66E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 Pfam PF00176 SNF2 family N-terminal domain 130 368 4.2E-18 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 SUPERFAMILY SSF52540 107 305 4.54E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 Gene3D G3DSA:3.40.50.10810 106 412 6.1E-60 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 Pfam PF00271 Helicase conserved C-terminal domain 472 583 4.3E-23 T 14-10-2018 IPR001650 Helicase, C-terminal Tph_c12040 555600458fbceb5c9fb0caac1aeeab8d 1114 Gene3D G3DSA:3.40.50.300 435 638 2.4E-44 T 14-10-2018 Tph_c05560 164a3874f81e678ed3466f67af2e6d2a 213 Pfam PF07758 Protein of unknown function (DUF1614) 44 212 2.6E-52 T 14-10-2018 IPR011672 Protein of unknown function DUF1614 Tph_c21530 55ffc8767b78637edd6c8d523867fd0b 221 SMART SM00471 48 176 1.1E-7 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c21530 55ffc8767b78637edd6c8d523867fd0b 221 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 45 216 1.8E-47 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 Tph_c21530 55ffc8767b78637edd6c8d523867fd0b 221 Gene3D G3DSA:1.10.3210.10 36 221 1.9E-58 T 14-10-2018 Tph_c21530 55ffc8767b78637edd6c8d523867fd0b 221 TIGRFAM TIGR00277 HDIG: HDIG domain 50 144 3.2E-7 T 14-10-2018 IPR006675 HDIG domain Tph_c21530 55ffc8767b78637edd6c8d523867fd0b 221 SUPERFAMILY SSF109604 40 218 1.39E-30 T 14-10-2018 Tph_c21530 55ffc8767b78637edd6c8d523867fd0b 221 Pfam PF01966 HD domain 52 167 1.6E-13 T 14-10-2018 IPR006674 HD domain Tph_c14220 acd15145ae05669bc53b8edeec601673 291 Pfam PF03193 RsgA GTPase 58 223 3.5E-54 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 Tph_c14220 acd15145ae05669bc53b8edeec601673 291 Gene3D G3DSA:2.40.50.140 1 59 1.5E-13 T 14-10-2018 Tph_c14220 acd15145ae05669bc53b8edeec601673 291 SUPERFAMILY SSF52540 65 284 8.47E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14220 acd15145ae05669bc53b8edeec601673 291 Gene3D G3DSA:3.40.50.300 61 223 3.8E-42 T 14-10-2018 Tph_c14220 acd15145ae05669bc53b8edeec601673 291 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 37 280 1.2E-74 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Tph_c14220 acd15145ae05669bc53b8edeec601673 291 Gene3D G3DSA:1.10.40.50 225 291 5.8E-22 T 14-10-2018 Tph_c14220 acd15145ae05669bc53b8edeec601673 291 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 288 35.834 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 Tph_c14220 acd15145ae05669bc53b8edeec601673 291 Pfam PF16745 RsgA N-terminal domain 3 55 4.5E-15 T 14-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal Tph_c14220 acd15145ae05669bc53b8edeec601673 291 SUPERFAMILY SSF50249 1 62 3.34E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 SUPERFAMILY SSF55326 11 157 1.19E-34 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 9 340 4.7E-141 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 Gene3D G3DSA:3.90.650.10 160 340 3.0E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 Gene3D G3DSA:3.30.1330.10 11 156 1.1E-53 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 Pfam PF02769 AIR synthase related protein, C-terminal domain 165 313 1.1E-28 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 SUPERFAMILY SSF56042 161 335 5.98E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 PIRSF PIRSF005644 5 340 3.8E-129 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE Tph_c09210 c9eded97a3da667bd21e925ff8554fa5 340 Pfam PF00586 AIR synthase related protein, N-terminal domain 42 153 1.4E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 450 469 1.1E-32 T 14-10-2018 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 480 499 1.1E-32 T 14-10-2018 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 105 124 1.1E-32 T 14-10-2018 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 376 1.1E-32 T 14-10-2018 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 503 521 1.1E-32 T 14-10-2018 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 SMART SM00382 97 275 5.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 Gene3D G3DSA:3.40.50.300 139 271 2.9E-22 T 14-10-2018 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 SUPERFAMILY SSF54211 359 542 1.97E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 181 196 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 14 542 6.8E-265 T 14-10-2018 IPR014251 Sporulation protease LonB Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 355 535 4.1E-32 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 453 461 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 101 272 2.5E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 Gene3D G3DSA:3.30.230.10 355 552 7.4E-50 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 SUPERFAMILY SSF52540 63 336 4.05E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c04660 19fac6ed5d1a7bee19df5e113e066e6f 554 Gene3D G3DSA:3.40.50.300 65 138 1.7E-12 T 14-10-2018 Tph_c13920 2cf04fd62b7e4aeba99a018aac9219ad 198 SUPERFAMILY SSF55811 57 174 4.37E-6 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tph_c13920 2cf04fd62b7e4aeba99a018aac9219ad 198 Gene3D G3DSA:3.90.79.10 1 197 2.0E-52 T 14-10-2018 Tph_c12060 4d384d9a504cb0dd07264e1de5e3f14a 909 Pfam PF04465 Protein of unknown function (DUF499) 135 437 4.4E-42 T 14-10-2018 IPR007555 Protein of unknown function DUF499 Tph_c01420 248a6bde63eb9da8c4f0c99d5ce4c891 200 Pfam PF07900 Protein of unknown function (DUF1670) 17 177 9.1E-34 T 14-10-2018 IPR012872 Protein of unknown function DUF1670 Tph_c24900 53f451756a792bed4e290be17e75c810 121 SUPERFAMILY SSF109604 58 99 1.38E-8 T 14-10-2018 Tph_c24900 53f451756a792bed4e290be17e75c810 121 Gene3D G3DSA:1.10.3210.10 6 111 1.1E-10 T 14-10-2018 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 Pfam PF01750 Hydrogenase maturation protease 28 154 5.6E-25 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 13 156 1.7E-42 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 Gene3D G3DSA:3.40.50.1450 10 158 3.7E-43 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c22670 a73e7650355601167cafabdf8baab5da 158 PRINTS PR00446 Hydrogen uptake protein signature 74 90 7.1E-18 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 PRINTS PR00446 Hydrogen uptake protein signature 11 23 7.1E-18 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 PRINTS PR00446 Hydrogen uptake protein signature 63 73 7.1E-18 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 PRINTS PR00446 Hydrogen uptake protein signature 42 59 7.1E-18 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 PRINTS PR00446 Hydrogen uptake protein signature 23 34 7.1E-18 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 Tph_c22670 a73e7650355601167cafabdf8baab5da 158 SUPERFAMILY SSF53163 11 157 3.66E-39 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily Tph_c21050 2b77430cd87772cbdf5d0268d0364fe8 261 SMART SM00478 40 199 1.3E-31 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tph_c21050 2b77430cd87772cbdf5d0268d0364fe8 261 PIRSF PIRSF001435 1 225 6.8E-73 T 14-10-2018 Tph_c21050 2b77430cd87772cbdf5d0268d0364fe8 261 SUPERFAMILY SSF48150 8 220 1.07E-57 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Tph_c21050 2b77430cd87772cbdf5d0268d0364fe8 261 Gene3D G3DSA:1.10.340.30 23 138 2.0E-36 T 14-10-2018 Tph_c21050 2b77430cd87772cbdf5d0268d0364fe8 261 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 179 2.0E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Tph_c21050 2b77430cd87772cbdf5d0268d0364fe8 261 Gene3D G3DSA:1.10.1670.10 139 238 1.1E-16 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Tph_c24510 d95bc53ab4da1b50f3ea2f1aa1258e74 273 Pfam PF03787 RAMP superfamily 22 226 1.6E-27 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein Tph_c24510 d95bc53ab4da1b50f3ea2f1aa1258e74 273 TIGRFAM TIGR02581 cas_cyan_RAMP: CRISPR-associated RAMP protein, SSO1426 family 14 232 8.8E-48 T 14-10-2018 IPR013411 CRISPR-associated RAMP TM1809 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 SUPERFAMILY SSF46894 206 261 4.76E-11 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 19 202 1.6E-40 T 14-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 Gene3D G3DSA:1.10.10.10 192 262 3.9E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 Pfam PF00196 Bacterial regulatory proteins, luxR family 218 261 9.3E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 219 233 1.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 249 1.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 249 261 1.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c24580 caabbe64cfe0f8a920ae14488e139c17 292 SMART SM00421 216 281 4.8E-4 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 Pfam PF07508 Recombinase 173 286 7.9E-24 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 Pfam PF00239 Resolvase, N terminal domain 4 150 5.6E-33 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 Pfam PF13408 Recombinase zinc beta ribbon domain 301 363 5.7E-15 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 Gene3D G3DSA:3.40.50.1390 2 133 2.5E-32 T 14-10-2018 Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 Gene3D G3DSA:1.10.10.2600 135 289 1.4E-14 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 SMART SM00857 4 151 1.3E-45 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c19940 a6d6c94f6580e3b4cf4d8e3447c8506e 539 SUPERFAMILY SSF53041 4 150 1.1E-28 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c04160 30a641e1e6ce115c22a45a8f6614de5a 157 SUPERFAMILY SSF56300 1 157 5.7E-41 T 14-10-2018 Tph_c04160 30a641e1e6ce115c22a45a8f6614de5a 157 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 147 3.1E-29 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Tph_c04160 30a641e1e6ce115c22a45a8f6614de5a 157 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 146 3.6E-30 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Tph_c04160 30a641e1e6ce115c22a45a8f6614de5a 157 Gene3D G3DSA:3.60.21.10 1 157 3.6E-41 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c20290 8d946464ded5038f0eb52322471612a0 210 SMART SM01018 1 84 1.8E-29 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20290 8d946464ded5038f0eb52322471612a0 210 Gene3D G3DSA:1.10.1240.10 2 83 3.2E-26 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20290 8d946464ded5038f0eb52322471612a0 210 Pfam PF02607 B12 binding domain 5 75 2.4E-20 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c20290 8d946464ded5038f0eb52322471612a0 210 Pfam PF02310 B12 binding domain 90 201 4.1E-26 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c20290 8d946464ded5038f0eb52322471612a0 210 Gene3D G3DSA:3.40.50.280 84 210 6.4E-47 T 14-10-2018 Tph_c20290 8d946464ded5038f0eb52322471612a0 210 SUPERFAMILY SSF52242 69 210 7.98E-45 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c20290 8d946464ded5038f0eb52322471612a0 210 SUPERFAMILY SSF47644 2 82 1.57E-22 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 ProSitePatterns PS00746 NifH/frxC family signature 1. 87 99 - T 14-10-2018 IPR030655 NifH/chlL conserved site Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 SUPERFAMILY SSF52540 1 271 8.77E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 PIRSF PIRSF000363 1 275 6.8E-124 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 3 273 2.5E-130 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 3 274 4.3E-142 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 PRINTS PR00091 Nitrogenase component II signature 8 21 1.2E-35 T 14-10-2018 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 PRINTS PR00091 Nitrogenase component II signature 124 139 1.2E-35 T 14-10-2018 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 PRINTS PR00091 Nitrogenase component II signature 85 99 1.2E-35 T 14-10-2018 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 PRINTS PR00091 Nitrogenase component II signature 31 46 1.2E-35 T 14-10-2018 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 Gene3D G3DSA:3.40.50.300 2 275 1.1E-67 T 14-10-2018 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 Hamap MF_00533 Nitrogenase iron protein [nifH]. 2 275 53.698 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 Tph_c08650 44a4c1407073540a00f5eddd2e445d95 275 ProSitePatterns PS00692 NifH/frxC family signature 2. 125 138 - T 14-10-2018 IPR030655 NifH/chlL conserved site Tph_c00840 f4232c3d95967b7efd210d3626d04380 453 Pfam PF13394 4Fe-4S single cluster domain 113 187 3.5E-6 T 14-10-2018 Tph_c00840 f4232c3d95967b7efd210d3626d04380 453 Pfam PF13186 Iron-sulfur cluster-binding domain 327 380 1.7E-5 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c00840 f4232c3d95967b7efd210d3626d04380 453 Pfam PF04055 Radical SAM superfamily 112 241 4.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c00840 f4232c3d95967b7efd210d3626d04380 453 Gene3D G3DSA:3.20.20.70 107 377 2.6E-39 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c00840 f4232c3d95967b7efd210d3626d04380 453 SUPERFAMILY SSF102114 105 390 5.23E-53 T 14-10-2018 Tph_c09790 7d7428694d1afdf1aa5c24047a534a0c 273 SUPERFAMILY SSF52540 4 225 5.89E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09790 7d7428694d1afdf1aa5c24047a534a0c 273 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 14 201 6.3E-76 T 14-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 Tph_c09790 7d7428694d1afdf1aa5c24047a534a0c 273 Gene3D G3DSA:3.40.50.300 2 263 5.3E-71 T 14-10-2018 Tph_c09790 7d7428694d1afdf1aa5c24047a534a0c 273 Pfam PF00005 ABC transporter 21 167 6.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c09790 7d7428694d1afdf1aa5c24047a534a0c 273 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c09790 7d7428694d1afdf1aa5c24047a534a0c 273 SMART SM00382 30 215 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 Pfam PF10150 Ribonuclease E/G family 118 385 1.7E-102 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 SUPERFAMILY SSF54791 432 482 4.43E-5 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 17 414 2.7E-144 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 Gene3D G3DSA:2.40.50.140 486 554 2.9E-13 T 14-10-2018 Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 Gene3D G3DSA:2.40.50.140 35 122 2.1E-30 T 14-10-2018 Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 SMART SM00316 41 116 6.9E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 SUPERFAMILY SSF50249 43 122 2.33E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 SUPERFAMILY SSF50249 491 554 1.5E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c06080 6c14e14d6aa0c426b75f5821e9e61336 558 Pfam PF01938 TRAM domain 496 554 2.3E-8 T 14-10-2018 IPR002792 TRAM domain Tph_c05740 015aad838aeb110a7bd6631142242f42 261 Gene3D G3DSA:3.30.60.100 146 193 4.1E-25 T 14-10-2018 Tph_c05740 015aad838aeb110a7bd6631142242f42 261 Pfam PF02565 Recombination protein O C terminal 84 245 4.8E-33 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tph_c05740 015aad838aeb110a7bd6631142242f42 261 Hamap MF_00201 DNA repair protein RecO [recO]. 2 251 30.031 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tph_c05740 015aad838aeb110a7bd6631142242f42 261 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 248 1.3E-51 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Tph_c05740 015aad838aeb110a7bd6631142242f42 261 Gene3D G3DSA:1.20.1440.120 87 241 4.1E-25 T 14-10-2018 Tph_c05740 015aad838aeb110a7bd6631142242f42 261 Gene3D G3DSA:2.40.50.140 2 82 3.6E-23 T 14-10-2018 Tph_c05740 015aad838aeb110a7bd6631142242f42 261 SUPERFAMILY SSF57863 82 240 1.28E-37 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Tph_c05740 015aad838aeb110a7bd6631142242f42 261 Pfam PF11967 Recombination protein O N terminal 1 75 9.0E-26 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Tph_c05740 015aad838aeb110a7bd6631142242f42 261 SUPERFAMILY SSF50249 2 77 2.06E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c23570 1b6fb9562fcf710471fd86d97c005224 421 Pfam PF02321 Outer membrane efflux protein 318 414 2.1E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 Tph_c23570 1b6fb9562fcf710471fd86d97c005224 421 Gene3D G3DSA:1.20.1600.10 314 417 3.7E-10 T 14-10-2018 Tph_c23570 1b6fb9562fcf710471fd86d97c005224 421 SUPERFAMILY SSF56954 1 415 2.35E-26 T 14-10-2018 Tph_c23570 1b6fb9562fcf710471fd86d97c005224 421 Gene3D G3DSA:1.20.1600.10 34 313 4.5E-14 T 14-10-2018 Tph_c10340 fcff0dc0745c1aee23aa40c8cb47acde 117 Pfam PF02021 Uncharacterised protein family UPF0102 11 101 4.6E-30 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Tph_c10340 fcff0dc0745c1aee23aa40c8cb47acde 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 114 23.331 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Tph_c10340 fcff0dc0745c1aee23aa40c8cb47acde 117 Gene3D G3DSA:3.40.1350.10 10 117 1.1E-32 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 Tph_c10340 fcff0dc0745c1aee23aa40c8cb47acde 117 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 102 1.0E-22 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 Tph_c10340 fcff0dc0745c1aee23aa40c8cb47acde 117 SUPERFAMILY SSF52980 6 113 5.69E-23 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tph_c12910 385b60955c4df41f07b9b5d001e42100 152 Gene3D G3DSA:3.30.70.260 63 152 4.2E-28 T 14-10-2018 Tph_c12910 385b60955c4df41f07b9b5d001e42100 152 Hamap MF_01054 UPF0237 protein . 64 152 25.859 T 14-10-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type Tph_c12910 385b60955c4df41f07b9b5d001e42100 152 SUPERFAMILY SSF55021 66 146 1.19E-19 T 14-10-2018 Tph_c12910 385b60955c4df41f07b9b5d001e42100 152 Pfam PF13740 ACT domain 67 139 2.3E-17 T 14-10-2018 Tph_c06030 2e0eb2f6e1c5b5967bf3ad40aa04d46e 88 Gene3D G3DSA:3.30.1070.10 2 82 6.9E-12 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Tph_c06030 2e0eb2f6e1c5b5967bf3ad40aa04d46e 88 Pfam PF03776 Septum formation topological specificity factor MinE 16 81 1.3E-21 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tph_c06030 2e0eb2f6e1c5b5967bf3ad40aa04d46e 88 SUPERFAMILY SSF55229 33 85 1.03E-10 T 14-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 Tph_c06030 2e0eb2f6e1c5b5967bf3ad40aa04d46e 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 1 86 15.528 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tph_c06030 2e0eb2f6e1c5b5967bf3ad40aa04d46e 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 2 81 1.2E-21 T 14-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 Tph_c14550 60bbfbbb1df0199cd8336f57d050dd31 184 SUPERFAMILY SSF52540 5 177 4.04E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14550 60bbfbbb1df0199cd8336f57d050dd31 184 Gene3D G3DSA:3.40.50.300 1 181 1.6E-15 T 14-10-2018 Tph_c03480 e227714a42ffbd06283a7116a058a8dc 177 SUPERFAMILY SSF52540 3 177 7.91E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03480 e227714a42ffbd06283a7116a058a8dc 177 Gene3D G3DSA:3.40.50.300 1 177 4.0E-67 T 14-10-2018 Tph_c03480 e227714a42ffbd06283a7116a058a8dc 177 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 3 177 4.4E-61 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c03480 e227714a42ffbd06283a7116a058a8dc 177 PIRSF PIRSF015617 1 177 4.3E-66 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c03480 e227714a42ffbd06283a7116a058a8dc 177 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 5 177 2.9E-64 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c06420 7dba5c01678b1629ed9f3ec41dd4714c 87 Gene3D G3DSA:1.10.760.20 2 80 4.0E-27 T 14-10-2018 IPR038292 YmfJ/YflH superfamily Tph_c06420 7dba5c01678b1629ed9f3ec41dd4714c 87 PIRSF PIRSF004764 1 85 3.7E-27 T 14-10-2018 IPR024702 Uncharacterised conserved protein YmfJ Tph_c06420 7dba5c01678b1629ed9f3ec41dd4714c 87 Pfam PF11588 Protein of unknown function (DUF3243) 4 78 3.6E-29 T 14-10-2018 IPR021637 Protein of unknown function DUF3243 Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 6.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 6.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 44 6.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 13 28 6.5E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 SUPERFAMILY SSF46785 1 107 2.2E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 SMART SM00418 11 90 4.3E-27 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 Gene3D G3DSA:1.10.10.10 2 103 1.7E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c19160 db3db0b129aaa068bea6a46c79e05819 113 Pfam PF01022 Bacterial regulatory protein, arsR family 18 63 2.1E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Tph_c11160 d6b1afcf491f15ddb6dbd5d6c7aa9b03 242 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 236 1.4E-100 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Tph_c11160 d6b1afcf491f15ddb6dbd5d6c7aa9b03 242 SUPERFAMILY SSF53633 4 236 3.4E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c11160 d6b1afcf491f15ddb6dbd5d6c7aa9b03 242 Gene3D G3DSA:3.40.1160.10 2 241 4.4E-85 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Tph_c11160 d6b1afcf491f15ddb6dbd5d6c7aa9b03 242 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.378 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Tph_c11160 d6b1afcf491f15ddb6dbd5d6c7aa9b03 242 Pfam PF00696 Amino acid kinase family 8 215 2.0E-33 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Tph_c11160 d6b1afcf491f15ddb6dbd5d6c7aa9b03 242 PIRSF PIRSF005650 1 242 4.4E-100 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Tph_c13160 207d70c36e06432f723b16621922d0b1 571 SUPERFAMILY SSF52540 232 419 8.2E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13160 207d70c36e06432f723b16621922d0b1 571 Gene3D G3DSA:3.40.50.300 246 439 4.2E-6 T 14-10-2018 Tph_c13160 207d70c36e06432f723b16621922d0b1 571 Pfam PF09818 Predicted ATPase of the ABC class 7 453 5.6E-190 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative Tph_c07200 865e8b25b2af6044e3b84a551c2bcadf 140 Gene3D G3DSA:2.10.260.10 2 97 7.1E-6 T 14-10-2018 Tph_c07200 865e8b25b2af6044e3b84a551c2bcadf 140 SUPERFAMILY SSF89447 1 40 3.66E-5 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c01210 92714d9fcfd6497a81bf873dedf35b4a 362 Gene3D G3DSA:1.20.58.2180 174 353 1.3E-63 T 14-10-2018 Tph_c01210 92714d9fcfd6497a81bf873dedf35b4a 362 Gene3D G3DSA:3.40.50.1980 198 306 1.3E-63 T 14-10-2018 Tph_c01210 92714d9fcfd6497a81bf873dedf35b4a 362 Gene3D G3DSA:3.40.50.1980 34 168 3.9E-44 T 14-10-2018 Tph_c01210 92714d9fcfd6497a81bf873dedf35b4a 362 SUPERFAMILY SSF53807 40 360 2.28E-53 T 14-10-2018 Tph_c01210 92714d9fcfd6497a81bf873dedf35b4a 362 Pfam PF01497 Periplasmic binding protein 73 298 5.1E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tph_c28320 a4f66d917a72199020855a2f864a9130 226 SUPERFAMILY SSF50346 3 68 3.61E-9 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c28320 a4f66d917a72199020855a2f864a9130 226 Pfam PF05239 PRC-barrel domain 5 69 2.8E-7 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c28320 a4f66d917a72199020855a2f864a9130 226 Pfam PF05239 PRC-barrel domain 92 160 1.3E-8 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c28320 a4f66d917a72199020855a2f864a9130 226 SUPERFAMILY SSF50346 92 158 4.71E-10 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c23520 d995b84bf8fc73d6e4e3787fbeb8be2e 167 Gene3D G3DSA:1.20.120.1490 44 119 1.2E-12 T 14-10-2018 Tph_c23520 d995b84bf8fc73d6e4e3787fbeb8be2e 167 Pfam PF13801 Heavy-metal resistance 7 124 3.0E-9 T 14-10-2018 IPR025961 Heavy-metal resistance protein Tph_c04590 f7c734e1c613b8a86adc2b03d063d8ce 412 Pfam PF07282 Putative transposase DNA-binding domain 322 371 3.7E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c26540 a428a82e677629102c512176bde4386d 498 SUPERFAMILY SSF56322 16 491 3.66E-158 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Tph_c26540 a428a82e677629102c512176bde4386d 498 Pfam PF04715 Anthranilate synthase component I, N terminal region 28 166 3.9E-38 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26540 a428a82e677629102c512176bde4386d 498 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 489 1.3E-168 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26540 a428a82e677629102c512176bde4386d 498 Pfam PF00425 chorismate binding enzyme 228 481 2.8E-98 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Tph_c26540 a428a82e677629102c512176bde4386d 498 PRINTS PR00095 Anthranilate synthase component I signature 423 437 3.0E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26540 a428a82e677629102c512176bde4386d 498 PRINTS PR00095 Anthranilate synthase component I signature 329 342 3.0E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26540 a428a82e677629102c512176bde4386d 498 PRINTS PR00095 Anthranilate synthase component I signature 343 356 3.0E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26540 a428a82e677629102c512176bde4386d 498 PRINTS PR00095 Anthranilate synthase component I signature 438 452 3.0E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Tph_c26540 a428a82e677629102c512176bde4386d 498 Gene3D G3DSA:3.60.120.10 2 496 2.1E-183 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Tph_c19360 87a379e5ab778ed300b5055e85b412f1 127 Gene3D G3DSA:3.30.460.10 24 127 7.2E-11 T 14-10-2018 Tph_c19360 87a379e5ab778ed300b5055e85b412f1 127 PIRSF PIRSF020217 1 127 5.3E-37 T 14-10-2018 IPR024700 Uncharacterised conserved protein, UCP020217 Tph_c19360 87a379e5ab778ed300b5055e85b412f1 127 SUPERFAMILY SSF81301 34 126 2.11E-10 T 14-10-2018 Tph_c01730 34479445e27c7436a065f68358650ede 552 Pfam PF13751 Transposase DDE domain 404 523 7.2E-20 T 14-10-2018 IPR025668 Transposase DDE domain Tph_c01730 34479445e27c7436a065f68358650ede 552 Pfam PF05598 Transposase domain (DUF772) 58 125 6.2E-8 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 SUPERFAMILY SSF51703 2 483 2.67E-194 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 482 2.2E-217 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 482 55.749 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 Pfam PF06368 Methylaspartate mutase E chain (MutE) 42 482 6.3E-217 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 Gene3D G3DSA:3.20.20.240 1 416 1.9E-175 T 14-10-2018 Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 Gene3D G3DSA:3.90.970.10 418 483 2.2E-28 T 14-10-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain superfamily GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c20260 ff6a46205f838fa125c6cb6ebec1d8da 483 PIRSF PIRSF001495 1 483 5.3E-204 T 14-10-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 Tph_c08810 89ffcd06a6c4f994f6267e3f856f5168 397 PIRSF PIRSF001549 5 397 4.1E-90 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Tph_c08810 89ffcd06a6c4f994f6267e3f856f5168 397 Pfam PF13393 Histidyl-tRNA synthetase 12 320 8.3E-92 T 14-10-2018 Tph_c08810 89ffcd06a6c4f994f6267e3f856f5168 397 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 325 1.1E-105 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Tph_c08810 89ffcd06a6c4f994f6267e3f856f5168 397 SUPERFAMILY SSF55681 9 328 1.81E-74 T 14-10-2018 Tph_c08810 89ffcd06a6c4f994f6267e3f856f5168 397 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 376 32.75 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 Tph_c08810 89ffcd06a6c4f994f6267e3f856f5168 397 Gene3D G3DSA:3.30.930.10 4 333 3.1E-101 T 14-10-2018 Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 Pfam PF13186 Iron-sulfur cluster-binding domain 226 286 2.9E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 PIRSF PIRSF037420 188 316 7.9E-25 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 PIRSF PIRSF037420 5 170 1.1E-28 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 Gene3D G3DSA:3.20.20.70 4 315 2.2E-43 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 Pfam PF04055 Radical SAM superfamily 10 142 1.4E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 226 312 2.7E-12 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 Pfam PF13394 4Fe-4S single cluster domain 13 91 1.5E-7 T 14-10-2018 Tph_c25240 48e7623a7bf82879c49ce8fc7f06ec83 316 SUPERFAMILY SSF102114 6 293 2.75E-53 T 14-10-2018 Tph_c10290 6ad5cb2a3d3eacab76e6f7676f28c4fa 271 Pfam PF01926 50S ribosome-binding GTPase 116 173 1.2E-13 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c10290 6ad5cb2a3d3eacab76e6f7676f28c4fa 271 Gene3D G3DSA:3.40.50.300 8 173 1.6E-37 T 14-10-2018 Tph_c10290 6ad5cb2a3d3eacab76e6f7676f28c4fa 271 Gene3D G3DSA:1.10.1580.10 175 271 8.3E-20 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily Tph_c10290 6ad5cb2a3d3eacab76e6f7676f28c4fa 271 PIRSF PIRSF006230 5 271 2.8E-64 T 14-10-2018 IPR016478 GTPase, MTG1 Tph_c10290 6ad5cb2a3d3eacab76e6f7676f28c4fa 271 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 8 269 6.8E-71 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis Tph_c10290 6ad5cb2a3d3eacab76e6f7676f28c4fa 271 SUPERFAMILY SSF52540 10 190 7.07E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c20210 bfe33eae69bfc18297d64d9022ff7857 249 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 9 246 1.1E-64 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal Tph_c20210 bfe33eae69bfc18297d64d9022ff7857 249 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 11 207 2.6E-21 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Tph_c20210 bfe33eae69bfc18297d64d9022ff7857 249 TIGRFAM TIGR01482 SPP-subfamily: sucrose-phosphate phosphatase subfamily 13 240 1.5E-31 T 14-10-2018 Tph_c20210 bfe33eae69bfc18297d64d9022ff7857 249 Gene3D G3DSA:3.90.1070.10 97 165 1.5E-69 T 14-10-2018 Tph_c20210 bfe33eae69bfc18297d64d9022ff7857 249 Gene3D G3DSA:3.40.50.1000 11 243 1.5E-69 T 14-10-2018 IPR023214 HAD superfamily Tph_c20210 bfe33eae69bfc18297d64d9022ff7857 249 SUPERFAMILY SSF56784 9 245 4.82E-28 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c10520 649fcb217423adea5ff5b80a7fb1780b 76 ProSitePatterns PS00234 Gas vesicles protein GVPa signature 1. 12 26 - T 14-10-2018 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 Tph_c10520 649fcb217423adea5ff5b80a7fb1780b 76 Hamap MF_00576 Gas vesicle structural protein [gvpA]. 4 76 20.449 T 14-10-2018 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 Tph_c10520 649fcb217423adea5ff5b80a7fb1780b 76 Pfam PF00741 Gas vesicle protein 11 49 2.1E-15 T 14-10-2018 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 Tph_c10520 649fcb217423adea5ff5b80a7fb1780b 76 ProSitePatterns PS00669 Gas vesicles protein GVPa signature 2. 45 58 - T 14-10-2018 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Pfam PF00391 PEP-utilising enzyme, mobile domain 502 573 5.5E-22 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 470 9.2E-188 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Pfam PF02887 Pyruvate kinase, alpha/beta domain 355 468 1.9E-40 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Pfam PF00224 Pyruvate kinase, barrel domain 1 339 1.6E-146 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 266 290 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 241 265 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 184 198 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 214 240 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 291 309 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 PRINTS PR01050 Pyruvate kinase family signature 310 326 1.1E-78 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 SUPERFAMILY SSF51621 1 338 4.19E-106 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Gene3D G3DSA:2.40.33.10 70 166 4.8E-205 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 SUPERFAMILY SSF50800 70 165 6.63E-27 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 SUPERFAMILY SSF52935 320 471 1.1E-46 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Gene3D G3DSA:3.50.30.10 472 583 2.5E-36 T 14-10-2018 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Gene3D G3DSA:3.20.20.60 2 332 4.8E-205 T 14-10-2018 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 ProSitePatterns PS00110 Pyruvate kinase active site signature. 212 224 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 Gene3D G3DSA:3.40.1380.20 333 466 4.8E-205 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c09390 40e19be6e9ed95e0bf56348e355d986b 583 SUPERFAMILY SSF52009 463 579 1.19E-30 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Tph_c08270 79b5da98e9b4d84745cbbfe73acdd264 382 Gene3D G3DSA:1.20.1090.10 184 382 2.2E-68 T 14-10-2018 Tph_c08270 79b5da98e9b4d84745cbbfe73acdd264 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 3.6E-121 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tph_c08270 79b5da98e9b4d84745cbbfe73acdd264 382 SUPERFAMILY SSF56796 6 381 6.93E-125 T 14-10-2018 Tph_c08270 79b5da98e9b4d84745cbbfe73acdd264 382 Gene3D G3DSA:3.40.50.1970 2 182 3.0E-56 T 14-10-2018 Tph_c18660 be5383ac720e252a913de985336f5653 276 SUPERFAMILY SSF82549 2 275 8.11E-80 T 14-10-2018 Tph_c18660 be5383ac720e252a913de985336f5653 276 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 2 275 3.0E-90 T 14-10-2018 IPR003797 DegV Tph_c18660 be5383ac720e252a913de985336f5653 276 Gene3D G3DSA:3.40.50.10170 1 149 1.5E-50 T 14-10-2018 Tph_c18660 be5383ac720e252a913de985336f5653 276 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 272 4.2E-79 T 14-10-2018 IPR003797 DegV Tph_c18660 be5383ac720e252a913de985336f5653 276 Gene3D G3DSA:3.30.1180.10 150 276 3.7E-38 T 14-10-2018 Tph_c22400 e0abe4771fc46cd3f96b2c9304c74b03 285 SUPERFAMILY SSF81345 3 262 5.75E-35 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c22400 e0abe4771fc46cd3f96b2c9304c74b03 285 Gene3D G3DSA:1.10.3470.10 37 269 4.5E-8 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c22400 e0abe4771fc46cd3f96b2c9304c74b03 285 Pfam PF00950 ABC 3 transport family 6 262 4.1E-62 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 SUPERFAMILY SSF46689 3 80 2.62E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 Gene3D G3DSA:1.10.357.10 51 200 1.9E-28 T 14-10-2018 Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 Pfam PF08359 YsiA-like protein, C-terminal region 58 157 2.6E-6 T 14-10-2018 IPR013570 Transcription regulator YsiA, C-terminal Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 2.4E-20 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 5.6E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 5.6E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 SUPERFAMILY SSF48498 76 167 1.22E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Tph_c02260 db7183aa54a4b772026aff2acccc6845 206 Gene3D G3DSA:1.10.10.60 1 50 3.0E-22 T 14-10-2018 Tph_c23400 2a8e841850c1f598f86720ca0893535b 118 Gene3D G3DSA:3.30.420.130 1 104 6.3E-32 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c23400 2a8e841850c1f598f86720ca0893535b 118 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 96 1.6E-22 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tph_c23400 2a8e841850c1f598f86720ca0893535b 118 SUPERFAMILY SSF53146 1 115 1.57E-35 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c05720 0a70eb451a94eaf04890b1383040a359 162 Gene3D G3DSA:3.30.70.20 65 118 5.4E-35 T 14-10-2018 Tph_c05720 0a70eb451a94eaf04890b1383040a359 162 Pfam PF12800 4Fe-4S binding domain 10 21 0.05 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c05720 0a70eb451a94eaf04890b1383040a359 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 92 103 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c05720 0a70eb451a94eaf04890b1383040a359 162 SUPERFAMILY SSF54862 5 146 4.52E-46 T 14-10-2018 Tph_c05720 0a70eb451a94eaf04890b1383040a359 162 Gene3D G3DSA:3.30.70.20 5 150 5.4E-35 T 14-10-2018 Tph_c05720 0a70eb451a94eaf04890b1383040a359 162 Pfam PF13247 4Fe-4S dicluster domain 55 141 4.3E-20 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 Gene3D G3DSA:3.30.70.20 67 113 3.6E-10 T 14-10-2018 Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 260 9.3E-21 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 SUPERFAMILY SSF52540 1 266 1.42E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 Pfam PF00037 4Fe-4S binding domain 96 115 1.7E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 Pfam PF00037 4Fe-4S binding domain 63 85 3.8E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c22510 77989364a41a56cfaa5fcbf3c162d2c4 289 SUPERFAMILY SSF54862 59 121 1.11E-16 T 14-10-2018 Tph_c02330 b8222bf08355c72f12e01988834e1a3c 219 Gene3D G3DSA:1.20.5.1070 23 96 3.1E-11 T 14-10-2018 Tph_c02330 b8222bf08355c72f12e01988834e1a3c 219 Gene3D G3DSA:1.20.5.1070 97 158 4.3E-8 T 14-10-2018 Tph_c02330 b8222bf08355c72f12e01988834e1a3c 219 SUPERFAMILY SSF57997 28 213 2.4E-19 T 14-10-2018 Tph_c23060 7dd65c71b24080b0d80af80a90960a68 728 SUPERFAMILY SSF57997 20 169 1.7E-6 T 14-10-2018 Tph_c23060 7dd65c71b24080b0d80af80a90960a68 728 SUPERFAMILY SSF48371 361 630 3.5E-16 T 14-10-2018 IPR016024 Armadillo-type fold Tph_c15640 f36972274d9f8c3ab1ac0fdd279b39d4 295 Pfam PF14045 YIEGIA protein 7 286 1.5E-127 T 14-10-2018 IPR025918 YIEGIA protein Tph_c15640 f36972274d9f8c3ab1ac0fdd279b39d4 295 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 3 291 4.0E-76 T 14-10-2018 Tph_c13140 38848d9a625effe621283f3082d719e1 443 Pfam PF05598 Transposase domain (DUF772) 47 125 1.6E-7 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Tph_c13140 38848d9a625effe621283f3082d719e1 443 Pfam PF01609 Transposase DDE domain 154 412 4.3E-12 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c00400 2bc5941d801484a7373ee7c447d40bad 142 Pfam PF04519 Polymer-forming cytoskeletal 17 113 1.9E-25 T 14-10-2018 IPR007607 Bactofilin A/B Tph_c25310 9202afcfcc4c5c2b1302db6dc0f0c876 111 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 3 106 2.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c25310 9202afcfcc4c5c2b1302db6dc0f0c876 111 Gene3D G3DSA:1.10.3720.10 1 104 4.1E-9 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c25310 9202afcfcc4c5c2b1302db6dc0f0c876 111 SUPERFAMILY SSF161098 2 90 8.5E-11 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c02540 b3e99c2ba72b653eabb1e2e949d0b544 114 Pfam PF14076 Domain of unknown function (DUF4258) 26 95 4.2E-13 T 14-10-2018 IPR025354 Protein of unknown function DUF4258 Tph_c24140 ee8eeb35fa1f4662a231acd4c4783175 93 Gene3D G3DSA:3.10.450.530 2 86 1.6E-9 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily Tph_c24140 ee8eeb35fa1f4662a231acd4c4783175 93 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 11 83 3.0E-10 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 Pfam PF13537 Glutamine amidotransferase domain 48 169 1.6E-46 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 Pfam PF00733 Asparagine synthase 241 606 1.4E-94 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 534 1.2E-153 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 Gene3D G3DSA:3.60.20.10 2 184 2.4E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 SUPERFAMILY SSF52402 230 578 1.83E-71 T 14-10-2018 Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 PIRSF PIRSF001589 1 612 5.6E-137 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 Tph_c08630 13761ebb8a2a1ad8386b676bd061570c 614 SUPERFAMILY SSF56235 1 226 2.74E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c03050 42174bb025f22e5f0c89ca805879ba66 92 Pfam PF12728 Helix-turn-helix domain 4 53 4.0E-18 T 14-10-2018 Tph_c03050 42174bb025f22e5f0c89ca805879ba66 92 Gene3D G3DSA:1.10.1660.10 2 53 1.9E-14 T 14-10-2018 Tph_c03050 42174bb025f22e5f0c89ca805879ba66 92 SUPERFAMILY SSF46955 3 55 4.76E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c03050 42174bb025f22e5f0c89ca805879ba66 92 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 51 4.1E-16 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Tph_c11410 30e9f03eae1aa4d83fbb3e114ec4fdda 88 Pfam PF05239 PRC-barrel domain 2 78 5.1E-13 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c11410 30e9f03eae1aa4d83fbb3e114ec4fdda 88 Gene3D G3DSA:2.30.30.240 2 78 2.0E-9 T 14-10-2018 Tph_c11410 30e9f03eae1aa4d83fbb3e114ec4fdda 88 SUPERFAMILY SSF50346 2 76 5.76E-13 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c11410 30e9f03eae1aa4d83fbb3e114ec4fdda 88 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 77 5.5E-26 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH Tph_c06810 bdad3891b163db5b8fad5e3445eff06c 144 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 5 130 2.5E-29 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c06810 bdad3891b163db5b8fad5e3445eff06c 144 Gene3D G3DSA:3.20.20.480 1 135 2.0E-42 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c08730 4fde661b7f1c9ac96c38583df215cd6b 78 Gene3D G3DSA:3.40.50.300 1 61 5.0E-10 T 14-10-2018 Tph_c08730 4fde661b7f1c9ac96c38583df215cd6b 78 SUPERFAMILY SSF52540 2 54 9.7E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c05210 431bd78c49b2911a0c357d239411a78f 292 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c05210 431bd78c49b2911a0c357d239411a78f 292 Gene3D G3DSA:3.40.50.300 3 270 1.0E-69 T 14-10-2018 Tph_c05210 431bd78c49b2911a0c357d239411a78f 292 SMART SM00382 32 219 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c05210 431bd78c49b2911a0c357d239411a78f 292 Pfam PF00005 ABC transporter 25 171 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c05210 431bd78c49b2911a0c357d239411a78f 292 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 17 205 5.6E-73 T 14-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 Tph_c05210 431bd78c49b2911a0c357d239411a78f 292 SUPERFAMILY SSF52540 5 234 5.11E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15590 b7223aba744497d49ddc6255a4278a16 192 SMART SM01207 7 182 1.2E-76 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c15590 b7223aba744497d49ddc6255a4278a16 192 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 190 20.264 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c15590 b7223aba744497d49ddc6255a4278a16 192 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 190 1.2E-55 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c15590 b7223aba744497d49ddc6255a4278a16 192 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 181 5.2E-52 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c13080 efa60a32184734cceff183051c96b79d 111 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 4 97 2.0E-23 T 14-10-2018 IPR002767 Thiamine-binding protein Tph_c13080 efa60a32184734cceff183051c96b79d 111 Pfam PF01910 Thiamine-binding protein 5 95 1.1E-27 T 14-10-2018 IPR002767 Thiamine-binding protein Tph_c13080 efa60a32184734cceff183051c96b79d 111 SUPERFAMILY SSF89957 3 99 1.07E-27 T 14-10-2018 IPR029756 MTH1187/YkoF-like Tph_c13080 efa60a32184734cceff183051c96b79d 111 Gene3D G3DSA:3.30.70.930 2 100 6.9E-30 T 14-10-2018 IPR029756 MTH1187/YkoF-like Tph_c27640 ebb14c936a3d58fc0be056585a95b58c 76 Pfam PF14451 Mut7-C ubiquitin 2 73 1.1E-9 T 14-10-2018 IPR027798 Ubiquitin Mut7-C domain Tph_c27640 ebb14c936a3d58fc0be056585a95b58c 76 Gene3D G3DSA:3.10.20.30 1 76 2.6E-7 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c27640 ebb14c936a3d58fc0be056585a95b58c 76 SUPERFAMILY SSF54285 1 76 7.85E-8 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tph_c09030 e803aed40bb408ad7d327850a9692a62 333 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 225 244 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tph_c09030 e803aed40bb408ad7d327850a9692a62 333 SMART SM01329 5 329 5.4E-199 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tph_c09030 e803aed40bb408ad7d327850a9692a62 333 SUPERFAMILY SSF53659 2 333 5.12E-136 T 14-10-2018 Tph_c09030 e803aed40bb408ad7d327850a9692a62 333 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 328 1.9E-115 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tph_c09030 e803aed40bb408ad7d327850a9692a62 333 Gene3D G3DSA:3.40.718.10 1 333 4.0E-156 T 14-10-2018 Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 Hamap MF_01217 Acyl carrier protein [acpP]. 8 81 22.403 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 Pfam PF00550 Phosphopantetheine attachment site 11 77 4.7E-19 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 SUPERFAMILY SSF47336 7 81 1.09E-24 T 14-10-2018 IPR036736 ACP-like superfamily Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 7 80 2.2E-33 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 Gene3D G3DSA:1.10.1200.10 2 82 6.3E-30 T 14-10-2018 IPR036736 ACP-like superfamily Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 SMART SM00823 Phosphopantetheine attachment site 10 81 5.6E-4 T 14-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 Tph_c10130 be4d06599c6aba754a14296e85cf67b0 82 ProSitePatterns PS00012 Phosphopantetheine attachment site. 36 51 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site Tph_c19220 ba03bba3726856b01276fa20d7782f08 133 SUPERFAMILY SSF52788 1 126 2.22E-37 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily Tph_c19220 ba03bba3726856b01276fa20d7782f08 133 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 124 1.6E-22 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tph_c19220 ba03bba3726856b01276fa20d7782f08 133 SMART SM00226 3 127 2.1E-37 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I Tph_c19220 ba03bba3726856b01276fa20d7782f08 133 Gene3D G3DSA:3.40.50.2300 2 133 1.9E-44 T 14-10-2018 Tph_c25340 6e3b103b776d71679d88845b4d4cea21 312 Gene3D G3DSA:1.10.3720.10 90 302 3.2E-26 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c25340 6e3b103b776d71679d88845b4d4cea21 312 SUPERFAMILY SSF161098 94 290 3.14E-22 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c25340 6e3b103b776d71679d88845b4d4cea21 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 307 4.9E-47 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c13490 b182ffb43a00481cce862cb657b9f5d4 263 Gene3D G3DSA:3.40.800.10 42 249 2.2E-14 T 14-10-2018 Tph_c13490 b182ffb43a00481cce862cb657b9f5d4 263 SUPERFAMILY SSF52768 66 229 1.8E-17 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Tph_c13490 b182ffb43a00481cce862cb657b9f5d4 263 Pfam PF00491 Arginase family 74 229 7.9E-11 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tph_c13490 b182ffb43a00481cce862cb657b9f5d4 263 PIRSF PIRSF036979 39 238 1.0E-8 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tph_c04770 664d63355abbeb893bedb131033cc959 648 Pfam PF00890 FAD binding domain 21 261 2.6E-24 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c04770 664d63355abbeb893bedb131033cc959 648 PIRSF PIRSF000171 416 624 1.0E-29 T 14-10-2018 Tph_c04770 664d63355abbeb893bedb131033cc959 648 PIRSF PIRSF000171 13 268 9.9E-40 T 14-10-2018 Tph_c04770 664d63355abbeb893bedb131033cc959 648 Gene3D G3DSA:3.50.50.90 10 292 5.9E-70 T 14-10-2018 Tph_c04770 664d63355abbeb893bedb131033cc959 648 Gene3D G3DSA:3.50.50.90 407 622 2.0E-40 T 14-10-2018 Tph_c04770 664d63355abbeb893bedb131033cc959 648 SUPERFAMILY SSF51905 15 482 6.33E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c04770 664d63355abbeb893bedb131033cc959 648 SUPERFAMILY SSF46977 504 613 1.96E-18 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c04770 664d63355abbeb893bedb131033cc959 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 22 41 8.5E-11 T 14-10-2018 Tph_c04770 664d63355abbeb893bedb131033cc959 648 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 429 451 8.5E-11 T 14-10-2018 Tph_c04770 664d63355abbeb893bedb131033cc959 648 Pfam PF02910 Fumarate reductase flavoprotein C-term 517 613 3.2E-7 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c03940 4b30117f9a15ff9090eccdf6452e9fa8 303 Gene3D G3DSA:3.90.226.10 42 252 7.0E-80 T 14-10-2018 Tph_c03940 4b30117f9a15ff9090eccdf6452e9fa8 303 Pfam PF01343 Peptidase family S49 109 259 1.3E-52 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 Tph_c03940 4b30117f9a15ff9090eccdf6452e9fa8 303 SUPERFAMILY SSF52096 37 245 2.16E-46 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c03940 4b30117f9a15ff9090eccdf6452e9fa8 303 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 40 258 6.9E-72 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 Tph_c03940 4b30117f9a15ff9090eccdf6452e9fa8 303 Gene3D G3DSA:3.40.1750.20 149 215 7.0E-80 T 14-10-2018 Tph_c05940 0686147e76fcd3ceccb8293528bf737f 86 Pfam PF14209 Domain of unknown function (DUF4321) 37 83 2.7E-13 T 14-10-2018 IPR025470 Protein of unknown function DUF4321 Tph_c29050 78d1a133a040abfc7106d81faf712186 393 SUPERFAMILY SSF82861 130 213 9.55E-9 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 Tph_c29050 78d1a133a040abfc7106d81faf712186 393 Pfam PF00924 Mechanosensitive ion channel 172 373 3.5E-62 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Tph_c29050 78d1a133a040abfc7106d81faf712186 393 SUPERFAMILY SSF82689 281 385 6.15E-20 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 Tph_c29050 78d1a133a040abfc7106d81faf712186 393 Gene3D G3DSA:3.30.70.100 281 378 5.4E-20 T 14-10-2018 Tph_c29050 78d1a133a040abfc7106d81faf712186 393 Gene3D G3DSA:2.30.30.60 230 279 2.0E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily Tph_c29050 78d1a133a040abfc7106d81faf712186 393 SUPERFAMILY SSF50182 214 280 3.6E-19 T 14-10-2018 IPR010920 LSM domain superfamily Tph_c16390 11f4ec68a9b70448ea361bbf9bfcff2d 175 Gene3D G3DSA:3.30.300.270 61 173 5.2E-27 T 14-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily Tph_c16390 11f4ec68a9b70448ea361bbf9bfcff2d 175 Pfam PF12685 SpoIIIAH-like protein 59 170 3.7E-30 T 14-10-2018 IPR024232 Stage III sporulation protein AH-like Tph_c08010 cae1f28d97d67289ffadd20ba2ba8d32 445 Pfam PF00665 Integrase core domain 136 266 2.5E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c08010 cae1f28d97d67289ffadd20ba2ba8d32 445 Pfam PF13565 Homeodomain-like domain 36 109 2.6E-9 T 14-10-2018 Tph_c08010 cae1f28d97d67289ffadd20ba2ba8d32 445 Gene3D G3DSA:3.30.420.10 123 303 2.7E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c08010 cae1f28d97d67289ffadd20ba2ba8d32 445 SUPERFAMILY SSF46689 7 113 1.68E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c08010 cae1f28d97d67289ffadd20ba2ba8d32 445 SUPERFAMILY SSF53098 135 295 1.97E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 SMART SM00382 35 234 1.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 319 1.5E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 Gene3D G3DSA:3.40.50.300 4 330 7.6E-105 T 14-10-2018 Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 5.5E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 Pfam PF00005 ABC transporter 27 184 8.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c25300 21e122723cbae24dfd22bdc4ad157681 332 SUPERFAMILY SSF52540 6 256 2.43E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13040 e486b5b72821ba74eb2f9bbda50aa3ef 322 PIRSF PIRSF004976 1 302 3.7E-77 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 Tph_c13040 e486b5b72821ba74eb2f9bbda50aa3ef 322 Gene3D G3DSA:3.40.50.620 1 299 9.9E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c13040 e486b5b72821ba74eb2f9bbda50aa3ef 322 Pfam PF01171 PP-loop family 49 220 3.1E-12 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Tph_c13040 e486b5b72821ba74eb2f9bbda50aa3ef 322 SUPERFAMILY SSF52402 24 246 6.62E-42 T 14-10-2018 Tph_c14240 bf63d3475bc53de3ebc91e73eadda76a 465 Gene3D G3DSA:3.90.1310.10 52 364 3.4E-116 T 14-10-2018 Tph_c14240 bf63d3475bc53de3ebc91e73eadda76a 465 SUPERFAMILY SSF56601 95 462 2.62E-88 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c14240 bf63d3475bc53de3ebc91e73eadda76a 465 Pfam PF00905 Penicillin binding protein transpeptidase domain 153 457 3.2E-60 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Tph_c14240 bf63d3475bc53de3ebc91e73eadda76a 465 Gene3D G3DSA:3.40.710.10 135 457 3.4E-116 T 14-10-2018 Tph_c04570 15c78a32dba12fe265697e6fbeb84c57 92 Pfam PF14358 Domain of unknown function (DUF4405) 9 79 1.9E-15 T 14-10-2018 IPR025517 Domain of unknown function DUF4405 Tph_c23280 05e474244e45db87d3361e30eca51b46 183 Pfam PF05119 Phage terminase, small subunit 71 146 2.1E-6 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family Tph_c25980 a360fb5ee3370872ce469121486feaac 247 Pfam PF07556 Protein of unknown function (DUF1538) 25 233 3.0E-70 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 SUPERFAMILY SSF56672 3 237 5.78E-82 T 14-10-2018 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Hamap MF_01113 DNA polymerase IV [dinB]. 2 353 36.27 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 SUPERFAMILY SSF100879 243 341 9.61E-22 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Gene3D G3DSA:1.10.150.20 178 231 2.1E-16 T 14-10-2018 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Gene3D G3DSA:2.30.40.20 13 73 2.6E-25 T 14-10-2018 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Gene3D G3DSA:3.30.1490.100 245 345 8.7E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Gene3D G3DSA:3.30.70.270 74 175 3.7E-31 T 14-10-2018 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Pfam PF00817 impB/mucB/samB family 9 155 1.3E-50 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tph_c13030 2fd8889cfa7bffa01dba2174b30e2108 396 Pfam PF11799 impB/mucB/samB family C-terminal domain 244 344 1.8E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 Tph_c02170 972c3461dc9d3a4ae2d63940555c9bdb 130 SUPERFAMILY SSF103481 58 129 1.22E-8 T 14-10-2018 Tph_c05680 0b2ce87f4d84fa73f795ca358649cc1d 192 Gene3D G3DSA:1.20.120.680 12 106 1.9E-7 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c05680 0b2ce87f4d84fa73f795ca358649cc1d 192 Gene3D G3DSA:1.20.120.680 112 192 4.7E-7 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c05680 0b2ce87f4d84fa73f795ca358649cc1d 192 SUPERFAMILY SSF101262 7 188 2.75E-16 T 14-10-2018 IPR036178 Formimidoyltransferase-cyclodeaminase-like superfamily GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c05680 0b2ce87f4d84fa73f795ca358649cc1d 192 Pfam PF04961 Formiminotransferase-cyclodeaminase 12 99 6.8E-7 T 14-10-2018 IPR007044 Cyclodeaminase/cyclohydrolase GO:0003824|GO:0044237 KEGG: 00340+2.1.2.5|KEGG: 00670+4.3.1.4+2.1.2.5|MetaCyc: PWY-5030|MetaCyc: PWY-5497|Reactome: R-HSA-70921 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 Gene3D G3DSA:3.40.50.10300 184 399 3.2E-84 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 390 1.7E-142 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 SUPERFAMILY SSF52507 2 177 6.02E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 SUPERFAMILY SSF102645 182 396 6.67E-77 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 Gene3D G3DSA:3.40.50.1950 1 183 3.0E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 183 365 8.9E-74 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Tph_c14320 e28d5a90976a994c0659d569364d9467 402 Pfam PF02441 Flavoprotein 3 176 2.6E-46 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 50 480 3.2E-128 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 Gene3D G3DSA:3.40.50.1980 41 463 1.4E-137 T 14-10-2018 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 131 145 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 Gene3D G3DSA:3.40.50.1980 50 196 1.4E-137 T 14-10-2018 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 Gene3D G3DSA:3.40.50.1980 197 470 1.4E-137 T 14-10-2018 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 Gene3D G3DSA:1.20.89.10 304 483 1.4E-137 T 14-10-2018 Tph_c08690 627cb7d730907dea0d39196c69cc76f4 493 SUPERFAMILY SSF53807 38 484 7.85E-136 T 14-10-2018 Tph_c26780 74534115816a7276b7a39bf59180dece 586 Pfam PF01268 Formate--tetrahydrofolate ligase 8 586 1.9E-213 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c26780 74534115816a7276b7a39bf59180dece 586 SUPERFAMILY SSF52540 10 584 3.09E-194 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c26780 74534115816a7276b7a39bf59180dece 586 Gene3D G3DSA:3.40.50.300 10 456 3.5E-166 T 14-10-2018 Tph_c26780 74534115816a7276b7a39bf59180dece 586 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 349 360 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c26780 74534115816a7276b7a39bf59180dece 586 Gene3D G3DSA:3.10.410.10 471 560 2.4E-27 T 14-10-2018 Tph_c26780 74534115816a7276b7a39bf59180dece 586 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 7 586 36.316 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Tph_c26780 74534115816a7276b7a39bf59180dece 586 Gene3D G3DSA:3.30.1510.10 137 268 3.5E-166 T 14-10-2018 Tph_c07830 2400df7151a75cc8d2ff1ee5935b5404 129 SMART SM00857 7 128 1.3E-14 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c07830 2400df7151a75cc8d2ff1ee5935b5404 129 Pfam PF00239 Resolvase, N terminal domain 9 109 6.3E-17 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c07830 2400df7151a75cc8d2ff1ee5935b5404 129 Gene3D G3DSA:3.40.50.1390 1 129 3.5E-20 T 14-10-2018 Tph_c07830 2400df7151a75cc8d2ff1ee5935b5404 129 SUPERFAMILY SSF53041 6 124 9.55E-20 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c11890 0087c64da7f86d2e4f72634c4b9ab2bb 70 Gene3D G3DSA:1.10.1660.10 3 32 1.2E-5 T 14-10-2018 Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 SUPERFAMILY SSF52540 359 606 1.45E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 Gene3D G3DSA:1.20.1560.10 20 357 1.1E-117 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 SMART SM00382 395 596 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 Gene3D G3DSA:3.40.50.300 366 610 2.0E-91 T 14-10-2018 Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 Pfam PF00664 ABC transporter transmembrane region 54 324 3.5E-61 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 SUPERFAMILY SSF90123 37 356 2.62E-91 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tph_c19110 339b0a4341aaff6b0aa2a4f929fd8954 610 Pfam PF00005 ABC transporter 386 535 2.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 TIGRFAM TIGR02903 spore_lon_C: ATP-dependent protease, Lon family 30 635 9.7E-282 T 14-10-2018 IPR014252 Sporulation protease LonC Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 SUPERFAMILY SSF54211 469 637 6.07E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 615 3.9E-27 T 14-10-2018 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 485 3.9E-27 T 14-10-2018 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 208 227 3.9E-27 T 14-10-2018 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 574 593 3.9E-27 T 14-10-2018 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 544 563 3.9E-27 T 14-10-2018 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 SMART SM00382 200 379 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 547 555 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 SUPERFAMILY SSF52540 173 431 1.42E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 375 1.9E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 441 638 7.6E-28 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 Gene3D G3DSA:3.30.230.10 461 645 8.0E-46 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c00790 a8d56760e8e793f9c4fcead9f79cab78 647 Gene3D G3DSA:3.40.50.300 161 377 2.0E-35 T 14-10-2018 Tph_c24780 f6c2f3b58f2270389b23b5161a2daafb 617 Gene3D G3DSA:3.30.420.480 189 368 1.6E-61 T 14-10-2018 Tph_c24780 f6c2f3b58f2270389b23b5161a2daafb 617 Gene3D G3DSA:2.40.50.570 105 188 2.8E-11 T 14-10-2018 Tph_c24780 f6c2f3b58f2270389b23b5161a2daafb 617 SUPERFAMILY SSF54292 4 92 1.97E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Tph_c24780 f6c2f3b58f2270389b23b5161a2daafb 617 Pfam PF14574 Domain of unknown function (DUF4445) 191 607 2.9E-151 T 14-10-2018 IPR027980 Protein of unknown function DUF4445 Tph_c24780 f6c2f3b58f2270389b23b5161a2daafb 617 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 82 2.9E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Tph_c24780 f6c2f3b58f2270389b23b5161a2daafb 617 Gene3D G3DSA:3.10.20.30 1 94 3.8E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c23560 d6dd74e4a3bdd44623d217b233b4cb48 128 Gene3D G3DSA:1.10.3720.10 3 127 6.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c23560 d6dd74e4a3bdd44623d217b233b4cb48 128 SUPERFAMILY SSF161098 12 120 1.44E-20 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c23560 d6dd74e4a3bdd44623d217b233b4cb48 128 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 9 120 1.5E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c26000 f4ce4b1c680c8128b0cb10740695f633 247 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 59 158 1.7E-6 T 14-10-2018 IPR012912 Plasmid pRiA4b, Orf3 Tph_c26000 f4ce4b1c680c8128b0cb10740695f633 247 SUPERFAMILY SSF159941 51 162 2.62E-15 T 14-10-2018 IPR024047 MM3350-like superfamily Tph_c01680 2be45c236f4dd7b869f7b7660bf5c4b5 319 Pfam PF01609 Transposase DDE domain 1 228 3.3E-23 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c01680 2be45c236f4dd7b869f7b7660bf5c4b5 319 SUPERFAMILY SSF53098 1 237 6.75E-26 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c18850 bdf6a4334dfb644c6e3eb38799b971d6 262 Pfam PF02421 Ferrous iron transport protein B 28 181 1.2E-59 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 Tph_c18850 bdf6a4334dfb644c6e3eb38799b971d6 262 SUPERFAMILY SSF52540 28 191 2.79E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c18850 bdf6a4334dfb644c6e3eb38799b971d6 262 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 48 2.7E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c18850 bdf6a4334dfb644c6e3eb38799b971d6 262 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 76 91 2.7E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c18850 bdf6a4334dfb644c6e3eb38799b971d6 262 Gene3D G3DSA:3.40.50.300 26 211 7.2E-44 T 14-10-2018 Tph_c04490 cc6ba1b6aca76a90d05edddfed07954a 447 Gene3D G3DSA:3.40.50.12030 184 361 1.7E-68 T 14-10-2018 Tph_c04490 cc6ba1b6aca76a90d05edddfed07954a 447 Pfam PF06792 Uncharacterised protein family (UPF0261) 5 355 1.5E-121 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 Tph_c04490 cc6ba1b6aca76a90d05edddfed07954a 447 PIRSF PIRSF033271 373 432 0.037 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 Tph_c04490 cc6ba1b6aca76a90d05edddfed07954a 447 PIRSF PIRSF033271 3 361 1.6E-107 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 Tph_c04490 cc6ba1b6aca76a90d05edddfed07954a 447 Gene3D G3DSA:3.40.50.12020 1 177 5.0E-55 T 14-10-2018 Tph_c22970 125810b230aa8991bc7d073fce68972a 522 SMART SM00857 29 178 3.9E-52 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c22970 125810b230aa8991bc7d073fce68972a 522 Gene3D G3DSA:3.40.50.1390 23 160 2.3E-57 T 14-10-2018 Tph_c22970 125810b230aa8991bc7d073fce68972a 522 Pfam PF13408 Recombinase zinc beta ribbon domain 327 387 1.1E-7 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c22970 125810b230aa8991bc7d073fce68972a 522 Gene3D G3DSA:1.10.10.2600 163 309 3.7E-23 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c22970 125810b230aa8991bc7d073fce68972a 522 SUPERFAMILY SSF53041 28 177 4.71E-38 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c22970 125810b230aa8991bc7d073fce68972a 522 Pfam PF00239 Resolvase, N terminal domain 29 177 1.5E-35 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c22970 125810b230aa8991bc7d073fce68972a 522 Pfam PF07508 Recombinase 200 307 6.8E-25 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c25020 65d90ef4f4445eef1dd332a44cff7c38 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 257 3.3E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c25020 65d90ef4f4445eef1dd332a44cff7c38 296 Gene3D G3DSA:1.10.3720.10 53 260 6.2E-20 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c25020 65d90ef4f4445eef1dd332a44cff7c38 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 2 42 2.2E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Tph_c25020 65d90ef4f4445eef1dd332a44cff7c38 296 SUPERFAMILY SSF161098 60 238 6.41E-25 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c12080 7a75ea642d471efc1210c108e5f9826a 166 Gene3D G3DSA:1.20.58.720 1 59 3.8E-7 T 14-10-2018 Tph_c12080 7a75ea642d471efc1210c108e5f9826a 166 Gene3D G3DSA:1.10.1660.10 64 116 1.1E-9 T 14-10-2018 Tph_c12080 7a75ea642d471efc1210c108e5f9826a 166 Pfam PF12728 Helix-turn-helix domain 69 112 1.5E-15 T 14-10-2018 Tph_c12080 7a75ea642d471efc1210c108e5f9826a 166 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 69 110 8.1E-15 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Tph_c12080 7a75ea642d471efc1210c108e5f9826a 166 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 47 1.8E-13 T 14-10-2018 IPR022453 Zinc finger, MqsA-type Tph_c12080 7a75ea642d471efc1210c108e5f9826a 166 SUPERFAMILY SSF46955 68 114 1.78E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c25200 480c756c05c567b0231fc97cf6d271b8 123 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 54 120 2.8E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25200 480c756c05c567b0231fc97cf6d271b8 123 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 52 122 4.2E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25200 480c756c05c567b0231fc97cf6d271b8 123 SUPERFAMILY SSF52540 16 122 1.09E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25200 480c756c05c567b0231fc97cf6d271b8 123 Gene3D G3DSA:3.40.50.300 9 123 4.5E-25 T 14-10-2018 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 71 144 1.9E-4 T 14-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 249 346 4.6E-32 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 Gene3D G3DSA:2.160.20.70 242 362 2.8E-41 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 73 351 23.313 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 Gene3D G3DSA:3.30.160.540 72 147 8.8E-10 T 14-10-2018 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 74 348 1.0E-37 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 Tph_c06010 df16c2b1368ee45dd66196fc2b491f21 366 SUPERFAMILY SSF63848 246 351 2.75E-32 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 Tph_c17670 e928a64553576c97253b144ff7b83203 98 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c17670 e928a64553576c97253b144ff7b83203 98 Gene3D G3DSA:3.30.70.3270 47 97 4.1E-5 T 14-10-2018 Tph_c17670 e928a64553576c97253b144ff7b83203 98 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 24 35 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c17670 e928a64553576c97253b144ff7b83203 98 SUPERFAMILY SSF54862 11 80 2.37E-16 T 14-10-2018 Tph_c17670 e928a64553576c97253b144ff7b83203 98 Pfam PF12838 4Fe-4S dicluster domain 24 73 3.9E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c17670 e928a64553576c97253b144ff7b83203 98 Gene3D G3DSA:3.30.70.20 8 46 1.3E-7 T 14-10-2018 Tph_c12450 7e460c405b2c31d496e4effb8d4a77b5 73 Pfam PF06305 Lipopolysaccharide assembly protein A domain 21 60 1.8E-11 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 Gene3D G3DSA:3.50.20.10 43 152 1.8E-37 T 14-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 4 150 1.9E-45 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 Gene3D G3DSA:3.30.60.30 2 42 4.0E-19 T 14-10-2018 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 152 40.92 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 4 150 1.0E-43 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 SUPERFAMILY SSF56271 4 150 1.31E-43 T 14-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c22790 ec6da7b8b98ebc1d6ea8d0990ab94dba 152 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 4 140 4.0E-38 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 Tph_c20800 5dc2c4f939c5fa56f0073bc7e96b3682 384 SUPERFAMILY SSF55347 198 308 1.57E-35 T 14-10-2018 Tph_c20800 5dc2c4f939c5fa56f0073bc7e96b3682 384 PIRSF PIRSF015578 2 379 2.4E-90 T 14-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Tph_c20800 5dc2c4f939c5fa56f0073bc7e96b3682 384 Pfam PF01658 Myo-inositol-1-phosphate synthase 200 308 1.6E-32 T 14-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Tph_c20800 5dc2c4f939c5fa56f0073bc7e96b3682 384 SUPERFAMILY SSF51735 5 364 2.76E-86 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c20800 5dc2c4f939c5fa56f0073bc7e96b3682 384 Gene3D G3DSA:3.30.360.10 199 308 1.7E-122 T 14-10-2018 Tph_c20800 5dc2c4f939c5fa56f0073bc7e96b3682 384 Gene3D G3DSA:3.40.50.720 6 361 1.7E-122 T 14-10-2018 Tph_c01020 868a7224fa13f12795b4aa7412b9c2bc 146 SUPERFAMILY SSF88723 8 135 1.09E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c01020 868a7224fa13f12795b4aa7412b9c2bc 146 Gene3D G3DSA:3.40.50.1010 9 144 5.9E-30 T 14-10-2018 Tph_c01020 868a7224fa13f12795b4aa7412b9c2bc 146 Pfam PF01850 PIN domain 10 134 4.4E-7 T 14-10-2018 IPR002716 PIN domain Tph_c03680 c37201c652b8f243006636c48190a713 288 Gene3D G3DSA:3.40.50.1110 113 285 6.4E-31 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Tph_c03680 c37201c652b8f243006636c48190a713 288 SUPERFAMILY SSF52266 121 285 1.28E-30 T 14-10-2018 Tph_c03680 c37201c652b8f243006636c48190a713 288 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 123 272 3.2E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 106 132 7.4E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 14 41 7.4E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 156 184 7.4E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 88 106 7.4E-37 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 15 229 1.4E-63 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 241 17.265 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c15420 d34ae6f0a2bdc29aa9a025121f7be2bf 255 Pfam PF00902 Sec-independent protein translocase protein (TatC) 17 224 7.2E-68 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Tph_c20590 1c3d745c6485e339cfa0426eca7919ba 56 SUPERFAMILY SSF158430 17 48 1.44E-9 T 14-10-2018 Tph_c20590 1c3d745c6485e339cfa0426eca7919ba 56 Pfam PF11155 Domain of unknown function (DUF2935) 19 48 4.7E-8 T 14-10-2018 IPR021328 Protein of unknown function DUF2935 Tph_c20590 1c3d745c6485e339cfa0426eca7919ba 56 Gene3D G3DSA:1.20.1260.120 5 52 4.1E-9 T 14-10-2018 Tph_c10180 83535e1b2f6d941eff49c9cd5e19e108 270 SUPERFAMILY SSF53167 1 256 2.49E-90 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 Tph_c10180 83535e1b2f6d941eff49c9cd5e19e108 270 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 239 5.2E-90 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Tph_c10180 83535e1b2f6d941eff49c9cd5e19e108 270 Pfam PF01048 Phosphorylase superfamily 3 238 3.3E-51 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 Tph_c10180 83535e1b2f6d941eff49c9cd5e19e108 270 Gene3D G3DSA:3.40.50.1580 1 269 1.5E-98 T 14-10-2018 Tph_c10180 83535e1b2f6d941eff49c9cd5e19e108 270 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 1 260 41.247 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 Tph_c14010 82153da272c842ce7d1fcfae3a4e4f77 187 Gene3D G3DSA:3.60.21.10 1 186 2.3E-57 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c14010 82153da272c842ce7d1fcfae3a4e4f77 187 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 170 3.5E-29 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 Tph_c14010 82153da272c842ce7d1fcfae3a4e4f77 187 SUPERFAMILY SSF56300 1 174 7.47E-41 T 14-10-2018 Tph_c14010 82153da272c842ce7d1fcfae3a4e4f77 187 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 164 2.7E-26 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 SUPERFAMILY SSF117143 92 221 1.96E-35 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 240 3.1E-57 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 181 258 1.8E-26 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 143 242 3.6E-31 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 1.6E-48 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 Pfam PF00460 Flagella basal body rod protein 5 35 3.2E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tph_c27110 a5a312f48e75dadfd3744a2018576f43 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 258 2.7E-92 T 14-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 Tph_c04830 35139455271091738bdfd2a8fa2309d4 279 Gene3D G3DSA:3.40.190.10 115 241 1.8E-90 T 14-10-2018 Tph_c04830 35139455271091738bdfd2a8fa2309d4 279 Gene3D G3DSA:3.40.190.10 44 271 1.8E-90 T 14-10-2018 Tph_c04830 35139455271091738bdfd2a8fa2309d4 279 Pfam PF12849 PBP superfamily domain 33 266 1.3E-44 T 14-10-2018 IPR024370 PBP domain Tph_c04830 35139455271091738bdfd2a8fa2309d4 279 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 10 277 1.6E-80 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 Tph_c04830 35139455271091738bdfd2a8fa2309d4 279 SUPERFAMILY SSF53850 39 276 3.61E-74 T 14-10-2018 Tph_c25280 d87c262dde51c9436bc8ec588d108f89 184 Pfam PF05685 Putative restriction endonuclease 13 176 1.6E-36 T 14-10-2018 IPR008538 Domain of unknown function DUF820 Tph_c25280 d87c262dde51c9436bc8ec588d108f89 184 Gene3D G3DSA:3.90.1570.10 5 184 1.2E-48 T 14-10-2018 Tph_c25280 d87c262dde51c9436bc8ec588d108f89 184 SUPERFAMILY SSF52980 3 182 7.51E-47 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tph_c09140 c52eee445b53df5f056ab171e7b85a98 148 Pfam PF02082 Transcriptional regulator 4 82 2.9E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tph_c09140 c52eee445b53df5f056ab171e7b85a98 148 Gene3D G3DSA:1.10.10.10 3 139 1.6E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c09140 c52eee445b53df5f056ab171e7b85a98 148 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 6 133 3.9E-38 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Tph_c09140 c52eee445b53df5f056ab171e7b85a98 148 SUPERFAMILY SSF46785 6 134 7.55E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c10790 816fce874c3bff8475207fb38bf2ae60 132 Pfam PF00460 Flagella basal body rod protein 16 40 4.6E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tph_c10790 816fce874c3bff8475207fb38bf2ae60 132 PIRSF PIRSF002889 5 131 4.3E-31 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Tph_c10790 816fce874c3bff8475207fb38bf2ae60 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 11 128 4.4E-28 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Tph_c28200 4bf4236e8005a2b3f819fa1c93afc27f 322 Pfam PF08486 Stage II sporulation protein 55 147 1.6E-19 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Tph_c28200 4bf4236e8005a2b3f819fa1c93afc27f 322 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 62 318 1.2E-58 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Tph_c00590 226c2a393be4e40b7b2273560cc81e7b 180 Gene3D G3DSA:1.10.10.970 2 74 1.4E-23 T 14-10-2018 Tph_c00590 226c2a393be4e40b7b2273560cc81e7b 180 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 2 175 32.375 T 14-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 Tph_c00590 226c2a393be4e40b7b2273560cc81e7b 180 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 3 168 8.9E-32 T 14-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 Tph_c00590 226c2a393be4e40b7b2273560cc81e7b 180 Gene3D G3DSA:3.20.170.30 94 179 1.4E-28 T 14-10-2018 Tph_c00590 226c2a393be4e40b7b2273560cc81e7b 180 SUPERFAMILY SSF56399 4 177 6.62E-56 T 14-10-2018 Tph_c18380 49779e8d0df8211f4e999eb08e80de12 135 Pfam PF14489 QueF-like protein 57 133 5.5E-29 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tph_c18380 49779e8d0df8211f4e999eb08e80de12 135 PIRSF PIRSF027377 4 135 7.4E-46 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tph_c18380 49779e8d0df8211f4e999eb08e80de12 135 Gene3D G3DSA:3.30.1130.10 18 135 3.9E-42 T 14-10-2018 Tph_c18380 49779e8d0df8211f4e999eb08e80de12 135 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 23 133 1.6E-40 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tph_c18380 49779e8d0df8211f4e999eb08e80de12 135 SUPERFAMILY SSF55620 13 126 9.64E-29 T 14-10-2018 Tph_c18380 49779e8d0df8211f4e999eb08e80de12 135 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 135 41.98 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 Pfam PF08281 Sigma-70, region 4 119 169 7.7E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 Gene3D G3DSA:1.10.10.10 118 181 6.4E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 SUPERFAMILY SSF88659 110 176 5.61E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 171 7.5E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 Pfam PF04542 Sigma-70 region 2 25 91 4.5E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 Gene3D G3DSA:1.10.1740.10 18 117 3.3E-17 T 14-10-2018 Tph_c06170 8262d9058332a1acbec1e9147f1c441a 194 SUPERFAMILY SSF88946 22 106 1.22E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c21410 6e129b97f1def3ca08870838480dd23c 295 Pfam PF01841 Transglutaminase-like superfamily 148 255 3.5E-24 T 14-10-2018 IPR002931 Transglutaminase-like Tph_c21410 6e129b97f1def3ca08870838480dd23c 295 Gene3D G3DSA:3.10.620.30 116 280 2.0E-35 T 14-10-2018 Tph_c21410 6e129b97f1def3ca08870838480dd23c 295 SMART SM00460 195 257 1.8E-20 T 14-10-2018 IPR002931 Transglutaminase-like Tph_c21410 6e129b97f1def3ca08870838480dd23c 295 SUPERFAMILY SSF54001 134 274 1.3E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 Gene3D G3DSA:3.40.50.2300 1 135 2.0E-12 T 14-10-2018 Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 PIRSF PIRSF036382 1 196 2.2E-44 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 Gene3D G3DSA:1.10.10.10 136 196 5.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 SUPERFAMILY SSF52172 4 189 1.57E-37 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 SMART SM01012 134 189 4.8E-23 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 SMART SM00448 4 118 0.0088 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 Pfam PF03861 ANTAR domain 137 189 1.3E-20 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Tph_c13000 c59e8a090459319ac401b7c27fd9bbbd 204 Pfam PF00072 Response regulator receiver domain 14 88 5.6E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 SUPERFAMILY SSF52540 3 220 4.04E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 Gene3D G3DSA:3.40.50.300 234 458 1.3E-51 T 14-10-2018 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 PIRSF PIRSF039117 1 399 4.0E-105 T 14-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 PIRSF PIRSF039117 392 459 9.7E-12 T 14-10-2018 IPR030665 Circadian clock protein kinase KaiC KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 PRINTS PR01874 DNA repair protein radA signature 248 276 2.4E-5 T 14-10-2018 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 PRINTS PR01874 DNA repair protein radA signature 290 307 2.4E-5 T 14-10-2018 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 Gene3D G3DSA:3.40.50.300 1 223 4.8E-49 T 14-10-2018 Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 Pfam PF06745 KaiC 4 221 1.3E-50 T 14-10-2018 IPR014774 KaiC-like domain Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 Pfam PF06745 KaiC 239 457 1.1E-48 T 14-10-2018 IPR014774 KaiC-like domain Tph_c27940 55e9ed671c3e6c0e2cada9b0ca43fc8e 462 SUPERFAMILY SSF52540 236 457 9.29E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15140 7cc1229ecce08600fb9f17c18265b354 324 Gene3D G3DSA:3.20.20.20 15 324 3.2E-125 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c15140 7cc1229ecce08600fb9f17c18265b354 324 Pfam PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit 16 264 1.1E-39 T 14-10-2018 IPR016041 CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel Tph_c15140 7cc1229ecce08600fb9f17c18265b354 324 SUPERFAMILY SSF51717 56 258 5.23E-16 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c13370 a9d4780eb7c8f1e08daa7ebd9ef19f37 114 SUPERFAMILY SSF102829 34 111 1.57E-16 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily Tph_c13370 a9d4780eb7c8f1e08daa7ebd9ef19f37 114 Pfam PF05164 Cell division protein ZapA 34 108 3.5E-16 T 14-10-2018 IPR007838 Cell division protein ZapA-like Tph_c01080 225b7d6e70081c657d6582de7edf7593 250 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c01080 225b7d6e70081c657d6582de7edf7593 250 Gene3D G3DSA:3.40.50.300 1 241 1.4E-66 T 14-10-2018 Tph_c01080 225b7d6e70081c657d6582de7edf7593 250 Pfam PF00005 ABC transporter 18 164 5.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c01080 225b7d6e70081c657d6582de7edf7593 250 SUPERFAMILY SSF52540 2 222 1.11E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01080 225b7d6e70081c657d6582de7edf7593 250 SMART SM00382 27 212 2.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c13510 281312ae84f92b1857569f2d09b2a814 137 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 11 137 1.5E-36 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c13510 281312ae84f92b1857569f2d09b2a814 137 PIRSF PIRSF004681 1 137 3.2E-40 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c13510 281312ae84f92b1857569f2d09b2a814 137 SUPERFAMILY SSF111038 1 137 5.23E-44 T 14-10-2018 IPR035917 YjbQ-like superfamily Tph_c13510 281312ae84f92b1857569f2d09b2a814 137 Gene3D G3DSA:2.60.120.460 1 137 5.6E-48 T 14-10-2018 IPR035917 YjbQ-like superfamily Tph_c13510 281312ae84f92b1857569f2d09b2a814 137 Pfam PF01894 Uncharacterised protein family UPF0047 20 133 2.7E-36 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Tph_c21880 901df3ea9a09233fe62263c6182d43c4 497 Gene3D G3DSA:3.60.110.10 240 463 1.3E-34 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c21880 901df3ea9a09233fe62263c6182d43c4 497 Pfam PF00795 Carbon-nitrogen hydrolase 243 460 7.7E-24 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tph_c21880 901df3ea9a09233fe62263c6182d43c4 497 SUPERFAMILY SSF56317 240 468 5.49E-44 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c01180 74dfa630c6cfd250601c6b5293bc4499 184 Gene3D G3DSA:1.10.1130.10 65 182 4.3E-20 T 14-10-2018 Tph_c01180 74dfa630c6cfd250601c6b5293bc4499 184 Pfam PF14537 Cytochrome c3 74 169 2.9E-14 T 14-10-2018 IPR012286 Tetrahaem cytochrome domain KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 Tph_c01180 74dfa630c6cfd250601c6b5293bc4499 184 SUPERFAMILY SSF48695 36 171 5.5E-17 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily Tph_c00940 8462085c17d945128326ed33bbe799cf 53 Pfam PF05036 Sporulation related domain 7 39 5.3E-9 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 Tph_c00940 8462085c17d945128326ed33bbe799cf 53 Gene3D G3DSA:3.30.70.1070 1 42 7.1E-12 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tph_c00940 8462085c17d945128326ed33bbe799cf 53 SUPERFAMILY SSF110997 6 40 7.32E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 61 126 4.0E-9 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 TIGRFAM TIGR00855 L12: ribosomal protein bL12 4 126 6.8E-51 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 Gene3D G3DSA:3.30.1390.10 56 126 1.3E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 60 126 4.6E-31 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 Gene3D G3DSA:1.20.5.710 3 55 8.5E-23 T 14-10-2018 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 SUPERFAMILY SSF48300 3 62 6.8E-17 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 SUPERFAMILY SSF54736 55 126 2.44E-25 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 126 25.679 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c26050 55f729ebfefa2254ece8ad26136252c6 126 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 3 49 2.9E-20 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c15980 dae1a5515597d31476bfeed61b06175d 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 117 1.4E-44 T 14-10-2018 IPR014204 Sporulation stage V, protein AE Tph_c15980 dae1a5515597d31476bfeed61b06175d 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 112 2.1E-34 T 14-10-2018 IPR005562 SpoVA Tph_c05280 4d554f6ea5c50b8718aa1927a495a439 266 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 256 2.5E-58 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Tph_c05280 4d554f6ea5c50b8718aa1927a495a439 266 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 254 5.6E-73 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 Tph_c01810 ea5b609c3dbbddfd21a485aaf3a5c305 262 SUPERFAMILY SSF51717 2 256 4.19E-78 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c01810 ea5b609c3dbbddfd21a485aaf3a5c305 262 Pfam PF00809 Pterin binding enzyme 6 224 1.1E-28 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c01810 ea5b609c3dbbddfd21a485aaf3a5c305 262 Gene3D G3DSA:3.20.20.20 1 262 9.2E-95 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c11760 8f740f9d6f06fd484bdcf71fb0588760 434 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 100 317 1.5E-39 T 14-10-2018 IPR000477 Reverse transcriptase domain Tph_c11760 8f740f9d6f06fd484bdcf71fb0588760 434 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 42 401 9.5E-123 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Tph_c11760 8f740f9d6f06fd484bdcf71fb0588760 434 SUPERFAMILY SSF56672 25 371 3.11E-56 T 14-10-2018 Tph_c11760 8f740f9d6f06fd484bdcf71fb0588760 434 Pfam PF08388 Group II intron, maturase-specific domain 337 406 2.1E-15 T 14-10-2018 IPR013597 Group II intron, maturase-specific Tph_c27120 379bd52bee3526b5edfb1e5b871369c4 253 SUPERFAMILY SSF117143 87 211 6.28E-18 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Tph_c27120 379bd52bee3526b5edfb1e5b871369c4 253 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 179 248 4.5E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Tph_c27120 379bd52bee3526b5edfb1e5b871369c4 253 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 130 1.4E-38 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Tph_c27120 379bd52bee3526b5edfb1e5b871369c4 253 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Tph_c27120 379bd52bee3526b5edfb1e5b871369c4 253 Pfam PF00460 Flagella basal body rod protein 5 35 3.2E-12 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Tph_c04090 b1073ae4c9c32c05fc01624230803bfb 210 Pfam PF10646 Sporulation and spore germination 79 188 1.1E-22 T 14-10-2018 IPR019606 GerMN domain Tph_c04090 b1073ae4c9c32c05fc01624230803bfb 210 SMART SM00909 103 192 8.2E-23 T 14-10-2018 IPR019606 GerMN domain Tph_c08710 b1601fd2d207dc27555563b852adafa3 271 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 31 42 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Tph_c08710 b1601fd2d207dc27555563b852adafa3 271 Pfam PF04055 Radical SAM superfamily 30 210 1.6E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c08710 b1601fd2d207dc27555563b852adafa3 271 SUPERFAMILY SSF102114 22 262 1.16E-36 T 14-10-2018 Tph_c08710 b1601fd2d207dc27555563b852adafa3 271 Gene3D G3DSA:3.20.20.70 16 270 6.7E-30 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 SUPERFAMILY SSF51395 16 323 1.26E-94 T 14-10-2018 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 100 118 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 PIRSF PIRSF006621 6 328 2.1E-104 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 Gene3D G3DSA:3.20.20.70 13 253 1.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 Pfam PF01207 Dihydrouridine synthase (Dus) 20 320 1.0E-95 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 9 323 2.4E-116 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 Tph_c26580 fcf2b38e91c88727d196d2ffc9eeaf60 329 Gene3D G3DSA:1.10.1200.80 257 328 1.3E-14 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 Tph_c24770 7b6bed7cf55fea64908cb942e5f88daa 223 Pfam PF07796 Protein of unknown function (DUF1638) 30 200 8.1E-46 T 14-10-2018 IPR012437 Domain of unknown function DUF1638 Tph_c26890 579f90d4339d8618b9c8d7f2955493ba 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 111 3.2E-30 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tph_c26890 579f90d4339d8618b9c8d7f2955493ba 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 108 1.3E-27 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tph_c26890 579f90d4339d8618b9c8d7f2955493ba 113 PIRSF PIRSF004761 1 113 9.7E-32 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tph_c26890 579f90d4339d8618b9c8d7f2955493ba 113 Gene3D G3DSA:3.30.2320.80 1 112 3.7E-33 T 14-10-2018 Tph_c26890 579f90d4339d8618b9c8d7f2955493ba 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 19.854 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 273 285 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 146 165 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 132 146 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 197 214 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 176 188 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 54 68 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 94 109 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00819 CbxX/CfqX superfamily signature 214 233 2.0E-60 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 SMART SM00382 91 229 3.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 Gene3D G3DSA:1.10.8.60 227 312 1.4E-24 T 14-10-2018 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 Gene3D G3DSA:3.40.50.300 30 226 2.0E-53 T 14-10-2018 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 95 225 2.0E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 SUPERFAMILY SSF52540 55 310 7.31E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00820 CbxX/CfqX protein signature 164 177 4.1E-6 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00820 CbxX/CfqX protein signature 49 63 4.1E-6 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00820 CbxX/CfqX protein signature 108 123 4.1E-6 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00820 CbxX/CfqX protein signature 280 291 4.1E-6 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00820 CbxX/CfqX protein signature 303 312 4.1E-6 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 Tph_c13790 92c547f2ffc9f853f9d94a08faa1f381 312 PRINTS PR00820 CbxX/CfqX protein signature 67 81 4.1E-6 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 Tph_c13400 667c33dea9e363daf6e13de255d893f8 138 TIGRFAM TIGR00494 crcB: protein CrcB 4 118 2.3E-27 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tph_c13400 667c33dea9e363daf6e13de255d893f8 138 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 120 18.445 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tph_c13400 667c33dea9e363daf6e13de255d893f8 138 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 115 4.2E-23 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Tph_c08850 608f303767a08b0305d0ad7e8f35bd6c 203 SUPERFAMILY SSF52317 1 200 1.53E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08850 608f303767a08b0305d0ad7e8f35bd6c 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 199 37.468 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tph_c08850 608f303767a08b0305d0ad7e8f35bd6c 203 Gene3D G3DSA:3.40.50.880 1 202 2.3E-79 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08850 608f303767a08b0305d0ad7e8f35bd6c 203 Pfam PF00117 Glutamine amidotransferase class-I 4 195 1.6E-23 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c08850 608f303767a08b0305d0ad7e8f35bd6c 203 PIRSF PIRSF000495 1 202 4.4E-71 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tph_c08850 608f303767a08b0305d0ad7e8f35bd6c 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 197 3.7E-72 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Tph_c10750 e4f3e359c7186ea02dfb7646a3f5e0b6 176 Gene3D G3DSA:3.60.20.10 2 176 1.1E-61 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c10750 e4f3e359c7186ea02dfb7646a3f5e0b6 176 PIRSF PIRSF039093 1 176 2.2E-82 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tph_c10750 e4f3e359c7186ea02dfb7646a3f5e0b6 176 Pfam PF00227 Proteasome subunit 4 175 5.5E-22 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Tph_c10750 e4f3e359c7186ea02dfb7646a3f5e0b6 176 SUPERFAMILY SSF56235 2 176 4.27E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Tph_c10750 e4f3e359c7186ea02dfb7646a3f5e0b6 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 5 176 2.2E-80 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tph_c10750 e4f3e359c7186ea02dfb7646a3f5e0b6 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 4 176 40.055 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 Tph_c28630 548acc9859638630fa5dfd8a05520ebf 280 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 1 271 8.0E-62 T 14-10-2018 IPR008764 Peptidase U57, YabG Tph_c28630 548acc9859638630fa5dfd8a05520ebf 280 PIRSF PIRSF011575 1 280 1.9E-88 T 14-10-2018 IPR008764 Peptidase U57, YabG Tph_c28630 548acc9859638630fa5dfd8a05520ebf 280 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 1 276 3.6E-91 T 14-10-2018 IPR008764 Peptidase U57, YabG Tph_c28630 548acc9859638630fa5dfd8a05520ebf 280 Pfam PF05582 YabG peptidase U57 1 276 3.6E-103 T 14-10-2018 IPR008764 Peptidase U57, YabG Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 13 457 3.2E-116 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 Pfam PF01189 16S rRNA methyltransferase RsmB/F 254 456 5.2E-57 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 SUPERFAMILY SSF48013 11 163 1.18E-36 T 14-10-2018 IPR035926 NusB-like superfamily Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 SUPERFAMILY SSF53335 150 457 7.69E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 Gene3D G3DSA:3.40.50.150 153 457 9.7E-90 T 14-10-2018 Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 Pfam PF01029 NusB family 11 135 2.2E-28 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 Gene3D G3DSA:1.10.940.10 7 148 4.3E-43 T 14-10-2018 IPR035926 NusB-like superfamily Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 236 250 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 382 398 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 440 457 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 265 275 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tph_c14270 ed946a70294b3a77d4b99f4788153936 462 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 332 344 1.1E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase Tph_c21650 3f6abd531dfd935c684bbb4742f3c07d 290 SUPERFAMILY SSF111331 4 265 1.57E-65 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Tph_c21650 3f6abd531dfd935c684bbb4742f3c07d 290 Pfam PF01513 ATP-NAD kinase 35 251 8.3E-55 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c21650 3f6abd531dfd935c684bbb4742f3c07d 290 Gene3D G3DSA:2.60.200.30 111 245 1.6E-71 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c21650 3f6abd531dfd935c684bbb4742f3c07d 290 Gene3D G3DSA:3.40.50.10330 13 253 1.6E-71 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Tph_c21650 3f6abd531dfd935c684bbb4742f3c07d 290 Hamap MF_00361 NAD kinase [nadK]. 1 269 26.801 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 336 356 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 305 321 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 359 378 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 114 134 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 440 456 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 54 62 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 PRINTS PR00301 70kDa heat shock protein signature 173 183 3.3E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Gene3D G3DSA:2.60.34.10 354 494 4.8E-66 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 611 37.513 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 SUPERFAMILY SSF53067 1 159 6.73E-60 T 14-10-2018 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Gene3D G3DSA:3.30.420.40 5 348 2.5E-151 T 14-10-2018 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Gene3D G3DSA:3.90.640.10 199 280 2.5E-151 T 14-10-2018 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Pfam PF00012 Hsp70 protein 78 575 8.3E-226 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 SUPERFAMILY SSF100934 478 577 3.92E-17 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 SUPERFAMILY SSF100920 355 511 5.62E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Gene3D G3DSA:3.30.420.40 160 338 2.5E-151 T 14-10-2018 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 1.6E-291 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 Gene3D G3DSA:1.20.1270.10 495 578 7.1E-26 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Tph_c21110 4dacbbff7eef560ad2ecda3806038c97 616 SUPERFAMILY SSF53067 162 353 4.26E-69 T 14-10-2018 Tph_c20650 d1968d3c4cbddf092c3a577ad35ffb02 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 5.6E-31 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Tph_c20650 d1968d3c4cbddf092c3a577ad35ffb02 90 Gene3D G3DSA:1.20.58.1000 1 90 3.1E-34 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 Gene3D G3DSA:3.30.230.10 73 165 7.0E-37 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 Gene3D G3DSA:3.30.160.20 1 72 7.8E-33 T 14-10-2018 Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 162 36.039 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 2.9E-30 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 SUPERFAMILY SSF54768 8 75 1.78E-23 T 14-10-2018 Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 SUPERFAMILY SSF54211 79 158 4.05E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 156 3.4E-31 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Tph_c25680 48b7157ab468c8e8151c9fda4622a5e0 165 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 162 5.1E-70 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tph_c26300 2814330d4106fcae3451f5bfb797ecb1 216 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 9 197 3.0E-71 T 14-10-2018 Tph_c26300 2814330d4106fcae3451f5bfb797ecb1 216 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 128 211 8.5E-12 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Tph_c06980 e7271cb5747feaff17d670f745a7d358 100 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 6 49 1.0E-12 T 14-10-2018 Tph_c06980 e7271cb5747feaff17d670f745a7d358 100 Gene3D G3DSA:3.30.70.1710 1 100 2.3E-39 T 14-10-2018 Tph_c06980 e7271cb5747feaff17d670f745a7d358 100 Pfam PF00936 BMC domain 6 81 1.3E-28 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c06980 e7271cb5747feaff17d670f745a7d358 100 SMART SM00877 5 81 3.8E-34 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c06980 e7271cb5747feaff17d670f745a7d358 100 SUPERFAMILY SSF143414 6 93 6.28E-32 T 14-10-2018 IPR037233 CcmK-like superfamily Tph_c11080 13b7d8f3b9f9063a9d3297cf7e9a4d0d 206 Gene3D G3DSA:3.40.1550.10 5 205 1.5E-56 T 14-10-2018 IPR028976 CheC-like superfamily Tph_c11080 13b7d8f3b9f9063a9d3297cf7e9a4d0d 206 SUPERFAMILY SSF103039 7 204 5.14E-47 T 14-10-2018 IPR028976 CheC-like superfamily Tph_c11080 13b7d8f3b9f9063a9d3297cf7e9a4d0d 206 Pfam PF04509 CheC-like family 111 145 3.2E-6 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 Tph_c11080 13b7d8f3b9f9063a9d3297cf7e9a4d0d 206 Pfam PF04509 CheC-like family 11 45 2.8E-14 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 188 6.5E-51 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 PRINTS PR00207 Flagellin signature 74 93 3.3E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 PRINTS PR00207 Flagellin signature 109 132 3.3E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 PRINTS PR00207 Flagellin signature 35 52 3.3E-5 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 Gene3D G3DSA:1.20.1330.10 40 244 1.0E-51 T 14-10-2018 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 2.3E-24 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Tph_c05690 34f4c26a648798961eb7790d83c0ff06 300 SUPERFAMILY SSF64518 2 300 3.66E-63 T 14-10-2018 Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 SUPERFAMILY SSF52540 7 252 5.09E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 Gene3D G3DSA:3.40.50.300 5 314 4.4E-79 T 14-10-2018 Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 293 2.9E-11 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 Pfam PF00005 ABC transporter 28 184 7.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 SMART SM00382 36 240 2.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c25150 4a743ca8412b3687953f2a2cee3190f3 314 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 311 3.3E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c01980 10d786f4d8d0e3d02c198fafa87f6780 83 SUPERFAMILY SSF89447 1 57 9.07E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c01980 10d786f4d8d0e3d02c198fafa87f6780 83 SMART SM00966 4 49 9.0E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c01980 10d786f4d8d0e3d02c198fafa87f6780 83 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 41 6.9E-13 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c01980 10d786f4d8d0e3d02c198fafa87f6780 83 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 41 2.7E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c01980 10d786f4d8d0e3d02c198fafa87f6780 83 Gene3D G3DSA:2.10.260.10 1 43 1.4E-12 T 14-10-2018 Tph_c14600 38d1ae6712c6b69d9b378b33c99b23cc 246 Pfam PF13649 Methyltransferase domain 80 177 1.9E-7 T 14-10-2018 Tph_c14600 38d1ae6712c6b69d9b378b33c99b23cc 246 Gene3D G3DSA:3.40.50.150 35 243 7.3E-40 T 14-10-2018 Tph_c14600 38d1ae6712c6b69d9b378b33c99b23cc 246 SUPERFAMILY SSF53335 3 213 1.16E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c24600 a936d9e74e9c6c1dcaa831ae8d5c50ed 439 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 5 427 33.8 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 Tph_c24600 a936d9e74e9c6c1dcaa831ae8d5c50ed 439 Pfam PF03313 Serine dehydratase alpha chain 88 422 5.1E-46 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Tph_c24600 a936d9e74e9c6c1dcaa831ae8d5c50ed 439 PIRSF PIRSF006054 3 429 1.3E-131 T 14-10-2018 IPR021144 Uncharacterised protein family UPF0597 Tph_c28420 61f8972bb314916d6a4ea16eac59d642 219 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 10 165 3.7E-50 T 14-10-2018 IPR014202 Sporulation stage II, protein R Tph_c28420 61f8972bb314916d6a4ea16eac59d642 219 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 40 162 3.2E-43 T 14-10-2018 IPR014202 Sporulation stage II, protein R Tph_c15010 54f2a7607a4d18d20422727a1e3588d1 56 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 2 42 5.8E-7 T 14-10-2018 IPR019241 Protein of unknown function DUF2197 Tph_c29180 646b1d63c5e1fa5401ded6ca8807a438 111 SUPERFAMILY SSF46785 49 107 3.14E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c29180 646b1d63c5e1fa5401ded6ca8807a438 111 Gene3D G3DSA:2.60.120.1460 14 109 5.4E-8 T 14-10-2018 Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 SMART SM00382 49 353 2.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 Pfam PF07724 AAA domain (Cdc48 subfamily) 203 350 8.9E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 106 3.6E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 464 1.0E-196 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 356 426 5.3E-7 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 464 43.791 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 SMART SM01086 356 450 2.7E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 SUPERFAMILY SSF52540 3 460 7.71E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10760 e69b6aa9acb158dba7a38b96630b3802 464 Gene3D G3DSA:1.10.8.60 356 461 3.2E-39 T 14-10-2018 Tph_c06680 b2b2c5bfa5de464af06eaa796a5891f6 320 Pfam PF00480 ROK family 5 312 4.1E-66 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tph_c06680 b2b2c5bfa5de464af06eaa796a5891f6 320 Gene3D G3DSA:3.30.420.40 124 294 9.4E-98 T 14-10-2018 Tph_c06680 b2b2c5bfa5de464af06eaa796a5891f6 320 ProSitePatterns PS01125 ROK family signature. 132 159 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tph_c06680 b2b2c5bfa5de464af06eaa796a5891f6 320 Gene3D G3DSA:3.30.420.40 5 307 9.4E-98 T 14-10-2018 Tph_c06680 b2b2c5bfa5de464af06eaa796a5891f6 320 SUPERFAMILY SSF53067 3 313 3.09E-67 T 14-10-2018 Tph_c02620 aa043717689906e74c9e1d5fc61f2210 559 Pfam PF00395 S-layer homology domain 503 544 0.016 T 14-10-2018 IPR001119 S-layer homology domain Tph_c02620 aa043717689906e74c9e1d5fc61f2210 559 Pfam PF00395 S-layer homology domain 372 413 3.9E-13 T 14-10-2018 IPR001119 S-layer homology domain Tph_c02620 aa043717689906e74c9e1d5fc61f2210 559 Pfam PF00395 S-layer homology domain 431 474 4.1E-15 T 14-10-2018 IPR001119 S-layer homology domain Tph_c24210 463acc20ec97c31ef8471037d2c97a7e 404 Pfam PF01548 Transposase 9 151 9.0E-34 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c24210 463acc20ec97c31ef8471037d2c97a7e 404 Pfam PF02371 Transposase IS116/IS110/IS902 family 249 334 2.0E-22 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c24250 463acc20ec97c31ef8471037d2c97a7e 404 Pfam PF01548 Transposase 9 151 9.0E-34 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c24250 463acc20ec97c31ef8471037d2c97a7e 404 Pfam PF02371 Transposase IS116/IS110/IS902 family 249 334 2.0E-22 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c08350 d53ea3bc9535c5d159ecc2147101dc9e 145 Gene3D G3DSA:2.40.33.20 1 145 2.0E-33 T 14-10-2018 Tph_c08350 d53ea3bc9535c5d159ecc2147101dc9e 145 SUPERFAMILY SSF50800 1 144 8.37E-38 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 Gene3D G3DSA:3.10.105.10 266 484 1.1E-125 T 14-10-2018 Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 Gene3D G3DSA:3.90.76.10 67 173 1.1E-125 T 14-10-2018 Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 PIRSF PIRSF002741 1 516 4.9E-114 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 Gene3D G3DSA:3.40.190.10 60 499 1.1E-125 T 14-10-2018 Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 SUPERFAMILY SSF53850 34 504 3.44E-130 T 14-10-2018 Tph_c03520 a136717a7b28563fb7ff20c93c427654 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 422 4.0E-93 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c28970 ca8a46cd61e83c95c7632b2b13f3dd54 86 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 83 1.1E-15 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA Tph_c28970 ca8a46cd61e83c95c7632b2b13f3dd54 86 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 10 83 6.4E-17 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA Tph_c28070 99ccfaf8e1f50dedf4a488691c104b81 427 Gene3D G3DSA:3.65.10.10 20 229 1.4E-156 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tph_c28070 99ccfaf8e1f50dedf4a488691c104b81 427 SUPERFAMILY SSF55205 2 415 1.5E-125 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Tph_c28070 99ccfaf8e1f50dedf4a488691c104b81 427 Gene3D G3DSA:3.65.10.10 5 412 1.4E-156 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Tph_c28070 99ccfaf8e1f50dedf4a488691c104b81 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 405 2.9E-89 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Tph_c28070 99ccfaf8e1f50dedf4a488691c104b81 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 40.024 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c28070 99ccfaf8e1f50dedf4a488691c104b81 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 412 6.6E-157 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Tph_c19150 a459c168e1176aa25ab1422b0d9522d8 130 Gene3D G3DSA:1.10.260.40 2 74 8.2E-17 T 14-10-2018 Tph_c19150 a459c168e1176aa25ab1422b0d9522d8 130 SUPERFAMILY SSF47413 8 75 6.76E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c19150 a459c168e1176aa25ab1422b0d9522d8 130 SMART SM00530 17 72 3.5E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c19150 a459c168e1176aa25ab1422b0d9522d8 130 Pfam PF01381 Helix-turn-helix 18 72 3.9E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c22920 b429e8415c0af1b5b43353ea4ccef4ac 98 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 96 5.0E-31 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Tph_c22920 b429e8415c0af1b5b43353ea4ccef4ac 98 Gene3D G3DSA:1.10.1760.20 1 97 1.5E-35 T 14-10-2018 Tph_c28300 28dc48b303ca463cbadf1ca40b86c312 205 Gene3D G3DSA:3.40.50.1470 10 204 3.7E-67 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Tph_c28300 28dc48b303ca463cbadf1ca40b86c312 205 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 18 194 32.411 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tph_c28300 28dc48b303ca463cbadf1ca40b86c312 205 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 19 201 3.4E-54 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tph_c28300 28dc48b303ca463cbadf1ca40b86c312 205 Pfam PF01195 Peptidyl-tRNA hydrolase 20 201 1.4E-55 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Tph_c28300 28dc48b303ca463cbadf1ca40b86c312 205 SUPERFAMILY SSF53178 19 201 1.22E-60 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Tph_c04530 80f5ad7b785c7c71f5d2ea39e99387cb 196 Gene3D G3DSA:3.20.20.400 9 195 5.0E-61 T 14-10-2018 IPR035928 GlpP-like superfamily Tph_c04530 80f5ad7b785c7c71f5d2ea39e99387cb 196 SUPERFAMILY SSF110391 18 193 2.22E-47 T 14-10-2018 IPR035928 GlpP-like superfamily Tph_c04530 80f5ad7b785c7c71f5d2ea39e99387cb 196 PIRSF PIRSF016897 8 196 3.1E-56 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Tph_c04530 80f5ad7b785c7c71f5d2ea39e99387cb 196 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 19 192 6.0E-57 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Tph_c12610 f65c8c62d147629052b7a5fe7e35752c 322 ProSitePatterns PS01348 MraY family signature 2. 165 176 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12610 f65c8c62d147629052b7a5fe7e35752c 322 Pfam PF00953 Glycosyl transferase family 4 81 244 4.5E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tph_c12610 f65c8c62d147629052b7a5fe7e35752c 322 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 19 318 8.7E-100 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c12610 f65c8c62d147629052b7a5fe7e35752c 322 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 6 319 22.119 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c29160 c89f2d03ecaa07392d48049b91ba753a 181 Pfam PF07796 Protein of unknown function (DUF1638) 25 175 3.9E-27 T 14-10-2018 IPR012437 Domain of unknown function DUF1638 Tph_c12830 8baad398e6f82aa9ce02a81c74cf6e10 230 PIRSF PIRSF004848 2 230 4.7E-71 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tph_c12830 8baad398e6f82aa9ce02a81c74cf6e10 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 227 5.2E-60 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tph_c12830 8baad398e6f82aa9ce02a81c74cf6e10 230 Pfam PF01168 Alanine racemase, N-terminal domain 16 227 3.8E-25 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Tph_c12830 8baad398e6f82aa9ce02a81c74cf6e10 230 Gene3D G3DSA:3.20.20.10 2 230 1.7E-86 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c12830 8baad398e6f82aa9ce02a81c74cf6e10 230 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 227 30.836 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Tph_c12830 8baad398e6f82aa9ce02a81c74cf6e10 230 SUPERFAMILY SSF51419 4 225 1.83E-77 T 14-10-2018 IPR029066 PLP-binding barrel Tph_c08720 16c8965cbaefedd2f0eac811dcb9dd6a 285 Pfam PF00682 HMGL-like 2 257 7.0E-77 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tph_c08720 16c8965cbaefedd2f0eac811dcb9dd6a 285 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 9 25 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c08720 16c8965cbaefedd2f0eac811dcb9dd6a 285 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 188 201 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c08720 16c8965cbaefedd2f0eac811dcb9dd6a 285 Gene3D G3DSA:3.20.20.70 1 263 7.8E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c08720 16c8965cbaefedd2f0eac811dcb9dd6a 285 SUPERFAMILY SSF51569 3 268 2.2E-80 T 14-10-2018 Tph_c06510 f920766de480f8a033e6c66dbc6db341 277 SUPERFAMILY SSF52518 11 271 8.97E-91 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c06510 f920766de480f8a033e6c66dbc6db341 277 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 16 265 6.4E-55 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Tph_c06510 f920766de480f8a033e6c66dbc6db341 277 Gene3D G3DSA:3.40.50.970 10 276 6.2E-111 T 14-10-2018 Tph_c03990 93bfea22526b61ec1533b9963845d124 85 Gene3D G3DSA:1.10.8.910 12 74 9.4E-13 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily Tph_c03990 93bfea22526b61ec1533b9963845d124 85 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 19 66 1.3E-13 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 Pfam PF00005 ABC transporter 24 184 1.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 318 1.0E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 299 1.8E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 SMART SM00382 33 234 9.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 SUPERFAMILY SSF52540 4 255 1.24E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17080 ddf616606a728183777bee7f45d0b16e 321 Gene3D G3DSA:3.40.50.300 2 321 2.1E-90 T 14-10-2018 Tph_c18190 c818e2fb6daf3cdb8573244382bbff6e 64 Pfam PF10133 Predicted RNA-binding protein 1 60 1.0E-24 T 14-10-2018 IPR019300 RNA-binding protein, predicted Tph_c16010 87bb933eb67d931d3ac0981eccc6448c 64 SUPERFAMILY SSF89807 2 63 6.41E-19 T 14-10-2018 IPR036694 Dodecin-like superfamily Tph_c16010 87bb933eb67d931d3ac0981eccc6448c 64 Gene3D G3DSA:3.30.1660.10 2 64 7.6E-20 T 14-10-2018 IPR025543 Dodecin-like Tph_c16010 87bb933eb67d931d3ac0981eccc6448c 64 Pfam PF07311 Dodecin 3 63 9.8E-23 T 14-10-2018 IPR009923 Dodecin Tph_c27460 36b7dcda1a0f95cc9f6cf882b0a324fc 393 Gene3D G3DSA:3.40.50.2000 8 366 7.2E-147 T 14-10-2018 Tph_c27460 36b7dcda1a0f95cc9f6cf882b0a324fc 393 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 369 1.6E-119 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Tph_c27460 36b7dcda1a0f95cc9f6cf882b0a324fc 393 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 7 371 5.6E-154 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 Tph_c27460 36b7dcda1a0f95cc9f6cf882b0a324fc 393 Gene3D G3DSA:3.40.50.2000 195 356 7.2E-147 T 14-10-2018 Tph_c27460 36b7dcda1a0f95cc9f6cf882b0a324fc 393 SUPERFAMILY SSF53756 5 375 1.88E-134 T 14-10-2018 Tph_c19780 562e7c6078123cf5d669282c0b2dbd97 127 PIRSF PIRSF018579 1 113 1.5E-41 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 Tph_c19780 562e7c6078123cf5d669282c0b2dbd97 127 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 9.6E-37 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 Tph_c17510 089eb6d2146301b210874cac9ce75ede 536 SUPERFAMILY SSF101898 63 310 3.66E-12 T 14-10-2018 Tph_c17510 089eb6d2146301b210874cac9ce75ede 536 Gene3D G3DSA:2.120.10.30 48 177 5.5E-11 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tph_c17510 089eb6d2146301b210874cac9ce75ede 536 Gene3D G3DSA:3.90.1720.10 382 522 3.2E-7 T 14-10-2018 Tph_c06990 d973634d9951fa817676429a6b28195d 239 PIRSF PIRSF012294 57 233 7.9E-56 T 14-10-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c06990 d973634d9951fa817676429a6b28195d 239 PIRSF PIRSF012294 1 63 2.3E-7 T 14-10-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c06990 d973634d9951fa817676429a6b28195d 239 Pfam PF01923 Cobalamin adenosyltransferase 68 225 3.6E-14 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tph_c06990 d973634d9951fa817676429a6b28195d 239 SUPERFAMILY SSF89028 67 226 5.89E-9 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tph_c06990 d973634d9951fa817676429a6b28195d 239 Gene3D G3DSA:1.20.1200.10 68 236 2.0E-7 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Tph_c05200 a66ae7e876cf998c14afa9c0b7ecc125 267 Pfam PF02361 Cobalt transport protein 17 222 6.1E-40 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tph_c05200 a66ae7e876cf998c14afa9c0b7ecc125 267 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 17 218 9.4E-49 T 14-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 Tph_c18720 eb5fea1863199fbdbd4ad0fb63bf15d2 154 Pfam PF07670 Nucleoside recognition 17 101 1.2E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 Pfam PF02153 Prephenate dehydrogenase 19 270 3.0E-68 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 SUPERFAMILY SSF55021 290 350 3.88E-8 T 14-10-2018 Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 Gene3D G3DSA:1.10.3660.10 177 291 1.6E-32 T 14-10-2018 Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 Gene3D G3DSA:3.40.50.720 1 175 6.1E-55 T 14-10-2018 Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 Gene3D G3DSA:3.30.70.260 292 357 2.2E-7 T 14-10-2018 Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 SUPERFAMILY SSF51735 3 167 5.72E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 Pfam PF01842 ACT domain 292 347 5.3E-8 T 14-10-2018 IPR002912 ACT domain Tph_c09520 2a0ffae67bd478e7e4fb6b6cf8a6b139 361 SUPERFAMILY SSF48179 170 279 1.25E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c22090 ebb001cbf58836191d535ae825424bc4 300 SUPERFAMILY SSF103481 43 136 8.5E-6 T 14-10-2018 Tph_c22090 ebb001cbf58836191d535ae825424bc4 300 Pfam PF00892 EamA-like transporter family 142 273 6.0E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c22090 ebb001cbf58836191d535ae825424bc4 300 Pfam PF00892 EamA-like transporter family 9 132 8.1E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c22090 ebb001cbf58836191d535ae825424bc4 300 SUPERFAMILY SSF103481 196 278 2.62E-14 T 14-10-2018 Tph_c06380 c078085ca4afff32b896a6035033f3b8 253 SUPERFAMILY SSF56317 1 241 1.06E-51 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c06380 c078085ca4afff32b896a6035033f3b8 253 Pfam PF00795 Carbon-nitrogen hydrolase 3 239 5.7E-35 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Tph_c06380 c078085ca4afff32b896a6035033f3b8 253 Gene3D G3DSA:3.60.110.10 1 246 1.6E-51 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Tph_c05340 2f37f2c48daacaa20fe0c536deadb70b 236 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 54 5.2E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain Tph_c05340 2f37f2c48daacaa20fe0c536deadb70b 236 Gene3D G3DSA:3.30.1330.60 75 234 3.3E-54 T 14-10-2018 IPR036737 OmpA-like domain superfamily Tph_c05340 2f37f2c48daacaa20fe0c536deadb70b 236 SUPERFAMILY SSF103088 97 225 1.96E-33 T 14-10-2018 IPR036737 OmpA-like domain superfamily Tph_c05340 2f37f2c48daacaa20fe0c536deadb70b 236 Pfam PF00691 OmpA family 120 219 2.8E-22 T 14-10-2018 IPR006665 OmpA-like domain Tph_c01110 8b6bb1b6697f92215e299bc67221ca03 101 Pfam PF13556 PucR C-terminal helix-turn-helix domain 28 65 2.0E-12 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tph_c01110 8b6bb1b6697f92215e299bc67221ca03 101 Gene3D G3DSA:1.10.10.2840 16 71 8.2E-11 T 14-10-2018 Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 SUPERFAMILY SSF89447 2 136 1.72E-51 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 146 55.938 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 1.0E-43 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 139 6.2E-50 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 Gene3D G3DSA:2.40.330.20 1 141 2.0E-54 T 14-10-2018 IPR038619 MraZ superfamily Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 4.2E-22 T 14-10-2018 IPR020603 MraZ domain Tph_c12550 a8f42001cdd2b43169e57ca36a56c1a8 146 Pfam PF02381 MraZ protein, putative antitoxin-like 72 137 4.0E-21 T 14-10-2018 IPR020603 MraZ domain Tph_c15670 3a90caee8a4c100f05b5b0053ddb9a1d 196 Pfam PF12804 MobA-like NTP transferase domain 5 146 3.9E-32 T 14-10-2018 IPR025877 MobA-like NTP transferase Tph_c15670 3a90caee8a4c100f05b5b0053ddb9a1d 196 SUPERFAMILY SSF53448 1 186 1.04E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c15670 3a90caee8a4c100f05b5b0053ddb9a1d 196 Gene3D G3DSA:3.90.550.10 1 195 1.2E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c15670 3a90caee8a4c100f05b5b0053ddb9a1d 196 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 189 23.08 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Tph_c14360 7b455522763bafa0e42c7102683a1b61 308 Pfam PF08340 Domain of unknown function (DUF1732) 225 308 1.1E-33 T 14-10-2018 IPR013551 Domain of unknown function DUF1732 Tph_c14360 7b455522763bafa0e42c7102683a1b61 308 Pfam PF03755 YicC-like family, N-terminal region 18 171 8.5E-42 T 14-10-2018 IPR013527 YicC-like, N-terminal Tph_c14360 7b455522763bafa0e42c7102683a1b61 308 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 18 308 1.2E-75 T 14-10-2018 IPR005229 Conserved hypothetical protein CHP00255 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 5.1E-34 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 9.6E-56 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 Gene3D G3DSA:1.10.8.50 1 72 1.0E-31 T 14-10-2018 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 SUPERFAMILY SSF46946 2 117 2.49E-46 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 PIRSF PIRSF002134 1 123 1.9E-45 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.802 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25600 88afe8a70b7e748017af346c1875f803 123 Gene3D G3DSA:4.10.910.10 73 118 5.2E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c01380 7650fdc565bc58450f6e144dc1ec8852 396 Pfam PF07900 Protein of unknown function (DUF1670) 221 384 9.8E-25 T 14-10-2018 IPR012872 Protein of unknown function DUF1670 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 SUPERFAMILY SSF52540 33 223 7.91E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.5E-42 T 14-10-2018 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 SUPERFAMILY SSF48019 246 338 4.59E-9 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 Gene3D G3DSA:1.10.8.60 8 238 5.4E-103 T 14-10-2018 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 295 3.6E-121 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 Gene3D G3DSA:3.40.50.300 13 177 5.4E-103 T 14-10-2018 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 6.0E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 6.0E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Tph_c29010 1a10daf4b43ac39d70a05f402e4101a5 626 SMART SM00382 37 179 2.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03840 3a948fecad0edcb5f4b6e655fa182426 159 SUPERFAMILY SSF141259 1 63 1.44E-11 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Tph_c03840 3a948fecad0edcb5f4b6e655fa182426 159 Gene3D G3DSA:1.20.58.1290 58 158 1.8E-31 T 14-10-2018 Tph_c03840 3a948fecad0edcb5f4b6e655fa182426 159 Pfam PF02559 CarD-like/TRCF domain 2 109 1.0E-18 T 14-10-2018 IPR003711 CarD-like/TRCF domain Tph_c03840 3a948fecad0edcb5f4b6e655fa182426 159 Gene3D G3DSA:2.30.30.840 1 57 2.7E-19 T 14-10-2018 Tph_c03840 3a948fecad0edcb5f4b6e655fa182426 159 SMART SM01058 1 110 4.6E-29 T 14-10-2018 IPR003711 CarD-like/TRCF domain Tph_c07620 d5db703f3d0c184fe13a578c2eac85de 88 Gene3D G3DSA:1.10.10.10 7 86 7.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c07620 d5db703f3d0c184fe13a578c2eac85de 88 Pfam PF13730 Helix-turn-helix domain 10 64 7.7E-16 T 14-10-2018 Tph_c07620 d5db703f3d0c184fe13a578c2eac85de 88 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 9.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c07620 d5db703f3d0c184fe13a578c2eac85de 88 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 9.7E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Tph_c07620 d5db703f3d0c184fe13a578c2eac85de 88 SUPERFAMILY SSF46785 13 72 5.67E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c18950 6649b3bf1102a14f6247d30013ccaa87 318 Pfam PF06023 CRISPR-associated exonuclease Csa1 12 305 5.9E-78 T 14-10-2018 IPR009260 CRISPR-associated exonuclease Csa1 Tph_c18950 6649b3bf1102a14f6247d30013ccaa87 318 TIGRFAM TIGR01896 cas_AF1879: CRISPR-associated protein Cas4/Csa1, subtype I-A/APERN 24 304 3.4E-64 T 14-10-2018 IPR009260 CRISPR-associated exonuclease Csa1 Tph_c25630 f4730f3ec530bb56a52ca1d741462fe1 100 SUPERFAMILY SSF50104 4 63 9.03E-12 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Tph_c25630 f4730f3ec530bb56a52ca1d741462fe1 100 Gene3D G3DSA:2.30.30.30 3 75 3.4E-5 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Tph_c02220 7e0e8668f99301675ff7fdd501f17af2 133 Gene3D G3DSA:1.10.10.10 18 131 5.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c02220 7e0e8668f99301675ff7fdd501f17af2 133 SUPERFAMILY SSF46785 24 112 9.27E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c02220 7e0e8668f99301675ff7fdd501f17af2 133 Pfam PF03551 Transcriptional regulator PadR-like family 32 104 1.1E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Tph_c11240 4de71c809dc972c5becb9f9ec1fa900b 344 Pfam PF02163 Peptidase family M50 6 328 2.6E-72 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Tph_c11240 4de71c809dc972c5becb9f9ec1fa900b 344 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 120 341 2.1E-55 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 Tph_c11240 4de71c809dc972c5becb9f9ec1fa900b 344 SUPERFAMILY SSF50156 92 189 1.29E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c11240 4de71c809dc972c5becb9f9ec1fa900b 344 SMART SM00228 108 180 1.5E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c11240 4de71c809dc972c5becb9f9ec1fa900b 344 Gene3D G3DSA:2.30.42.10 123 205 1.0E-21 T 14-10-2018 Tph_c11240 4de71c809dc972c5becb9f9ec1fa900b 344 Pfam PF13180 PDZ domain 121 182 2.0E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c19630 dca6e07e0f43c7719a47ab4ebd656f80 336 Pfam PF01513 ATP-NAD kinase 4 164 1.8E-13 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Tph_c19630 dca6e07e0f43c7719a47ab4ebd656f80 336 Gene3D G3DSA:3.40.50.10330 63 155 2.2E-5 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Tph_c19630 dca6e07e0f43c7719a47ab4ebd656f80 336 PIRSF PIRSF018567 1 335 3.4E-109 T 14-10-2018 IPR011391 Acetoin catabolism kinase AcoX Tph_c19630 dca6e07e0f43c7719a47ab4ebd656f80 336 SUPERFAMILY SSF111331 71 160 2.35E-9 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 SUPERFAMILY SSF51735 4 157 1.84E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 Gene3D G3DSA:3.30.360.10 133 238 2.1E-76 T 14-10-2018 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 153 170 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 269 1.7E-78 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 5 269 29.223 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 5 131 9.6E-31 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 134 268 7.6E-33 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 SUPERFAMILY SSF55347 132 240 2.4E-36 T 14-10-2018 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 Gene3D G3DSA:3.40.50.720 7 256 2.1E-76 T 14-10-2018 Tph_c11420 fb693a3de1ab547d78df55653ce18ce1 269 PIRSF PIRSF000161 3 269 2.8E-68 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Tph_c25160 dabcbe7c894850cb858d1fabcfcee864 130 Gene3D G3DSA:3.30.460.10 30 130 1.3E-16 T 14-10-2018 Tph_c25160 dabcbe7c894850cb858d1fabcfcee864 130 SUPERFAMILY SSF81301 34 126 1.33E-15 T 14-10-2018 Tph_c25160 dabcbe7c894850cb858d1fabcfcee864 130 PIRSF PIRSF020217 7 124 1.5E-26 T 14-10-2018 IPR024700 Uncharacterised conserved protein, UCP020217 Tph_c25160 dabcbe7c894850cb858d1fabcfcee864 130 Pfam PF01909 Nucleotidyltransferase domain 41 84 4.7E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c28240 ddda7af634e7e7030f354f235bf70817 515 Pfam PF01943 Polysaccharide biosynthesis protein 6 309 1.1E-34 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 Tph_c28240 ddda7af634e7e7030f354f235bf70817 515 PIRSF PIRSF038958 1 515 1.9E-148 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type Tph_c28240 ddda7af634e7e7030f354f235bf70817 515 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 363 502 8.4E-28 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Tph_c16100 e98d5ec37b10811f39a26bb3ecb4d2b7 210 PIRSF PIRSF038973 11 209 1.2E-38 T 14-10-2018 IPR014196 Stage II sporulation protein M Tph_c16100 e98d5ec37b10811f39a26bb3ecb4d2b7 210 Pfam PF01944 Stage II sporulation protein M 24 199 1.8E-15 T 14-10-2018 IPR002798 Stage II sporulation protein M-like Tph_c16100 e98d5ec37b10811f39a26bb3ecb4d2b7 210 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 26 203 8.0E-39 T 14-10-2018 IPR014196 Stage II sporulation protein M Tph_c22650 6852034df9826d346dc74e0a755eb4a4 378 Gene3D G3DSA:3.40.50.2000 207 361 8.3E-18 T 14-10-2018 Tph_c22650 6852034df9826d346dc74e0a755eb4a4 378 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 241 346 4.0E-7 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Tph_c22650 6852034df9826d346dc74e0a755eb4a4 378 SUPERFAMILY SSF53756 51 376 9.26E-27 T 14-10-2018 Tph_c22650 6852034df9826d346dc74e0a755eb4a4 378 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 18 183 2.9E-28 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 Tph_c25270 d424617668be6333441c86246c48cbd5 529 SUPERFAMILY SSF53850 59 515 3.41E-111 T 14-10-2018 Tph_c25270 d424617668be6333441c86246c48cbd5 529 PIRSF PIRSF002741 42 523 1.7E-91 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c25270 d424617668be6333441c86246c48cbd5 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 431 5.9E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c25270 d424617668be6333441c86246c48cbd5 529 Gene3D G3DSA:3.40.190.10 38 264 3.4E-60 T 14-10-2018 Tph_c25270 d424617668be6333441c86246c48cbd5 529 Gene3D G3DSA:3.10.105.10 265 486 1.7E-46 T 14-10-2018 Tph_c05480 cd798d874312e68a666e149d7e15b3ac 243 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 2 219 3.4E-55 T 14-10-2018 IPR017592 Pilus assembly, Flp-type CpaB Tph_c05480 cd798d874312e68a666e149d7e15b3ac 243 SMART SM00858 35 97 9.5E-9 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Tph_c05480 cd798d874312e68a666e149d7e15b3ac 243 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 106 209 3.1E-27 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Tph_c05480 cd798d874312e68a666e149d7e15b3ac 243 Pfam PF08666 SAF domain 37 96 5.1E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Tph_c23290 bc638faba5e431121429d0142c715e07 78 Pfam PF01695 IstB-like ATP binding protein 3 73 1.9E-10 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c23290 bc638faba5e431121429d0142c715e07 78 Gene3D G3DSA:3.40.50.300 1 78 6.3E-12 T 14-10-2018 Tph_c12320 ef0199a8386e3fbbc6a55c90073bfb4a 181 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 3 172 34.225 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Tph_c12320 ef0199a8386e3fbbc6a55c90073bfb4a 181 Pfam PF02677 Uncharacterized BCR, COG1636 3 171 1.1E-57 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 Gene3D G3DSA:1.10.275.10 2 204 1.9E-69 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 SUPERFAMILY SSF48557 7 503 3.14E-198 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 Gene3D G3DSA:1.20.200.10 205 514 4.7E-124 T 14-10-2018 Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 Pfam PF00221 Aromatic amino acid lyase 18 475 5.8E-199 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 11 510 1.8E-210 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 10 509 45.698 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Tph_c20460 2c6b35402be5e0c6a52274744b18465b 516 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 146 162 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Tph_c27860 8392cb63a720302d97a7cab16e9fe2a4 359 SUPERFAMILY SSF55729 157 338 1.95E-46 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tph_c27860 8392cb63a720302d97a7cab16e9fe2a4 359 Gene3D G3DSA:3.40.630.30 150 319 5.0E-109 T 14-10-2018 Tph_c27860 8392cb63a720302d97a7cab16e9fe2a4 359 Pfam PF02388 FemAB family 240 335 1.9E-21 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 Tph_c27860 8392cb63a720302d97a7cab16e9fe2a4 359 Pfam PF02388 FemAB family 14 235 9.8E-35 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 Tph_c27860 8392cb63a720302d97a7cab16e9fe2a4 359 Gene3D G3DSA:3.40.630.30 15 330 5.0E-109 T 14-10-2018 Tph_c27860 8392cb63a720302d97a7cab16e9fe2a4 359 SUPERFAMILY SSF55729 11 165 1.11E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 SUPERFAMILY SSF53927 4 257 6.92E-57 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 Pfam PF02634 FdhD/NarQ family 26 256 4.2E-54 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 258 25.871 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 Gene3D G3DSA:3.10.20.10 28 95 8.8E-10 T 14-10-2018 Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 Gene3D G3DSA:3.40.140.10 116 261 2.6E-36 T 14-10-2018 Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 PIRSF PIRSF015626 3 261 2.2E-58 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c01740 7ad9c99aa96237f9f9a5816d0dbab309 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 257 8.8E-52 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Tph_c21230 7c019d186fcd72c833f6df29be8ebf9a 306 SUPERFAMILY SSF102588 10 265 2.88E-43 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Tph_c21230 7c019d186fcd72c833f6df29be8ebf9a 306 Pfam PF02585 GlcNAc-PI de-N-acetylase 14 181 1.4E-28 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Tph_c21230 7c019d186fcd72c833f6df29be8ebf9a 306 Gene3D G3DSA:3.40.50.10320 9 267 6.1E-53 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 Pfam PF00664 ABC transporter transmembrane region 18 286 1.9E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 Gene3D G3DSA:1.20.1560.10 3 314 3.4E-95 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 Gene3D G3DSA:3.40.50.300 324 578 4.2E-91 T 14-10-2018 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 SUPERFAMILY SSF52540 327 570 2.13E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 Pfam PF00005 ABC transporter 351 500 4.8E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 SUPERFAMILY SSF90123 5 316 3.14E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Tph_c19120 1129e27b54fcfdc26e04f7a6576f9634 580 SMART SM00382 360 546 2.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27870 c88001a14300a11593958595f7bf8526 543 Gene3D G3DSA:3.40.50.880 301 543 4.1E-100 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c27870 c88001a14300a11593958595f7bf8526 543 Gene3D G3DSA:3.40.50.300 6 298 2.3E-139 T 14-10-2018 Tph_c27870 c88001a14300a11593958595f7bf8526 543 Pfam PF00117 Glutamine amidotransferase class-I 315 538 6.9E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase Tph_c27870 c88001a14300a11593958595f7bf8526 543 TIGRFAM TIGR00337 PyrG: CTP synthase 15 540 5.6E-258 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tph_c27870 c88001a14300a11593958595f7bf8526 543 SUPERFAMILY SSF52317 302 541 1.22E-80 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c27870 c88001a14300a11593958595f7bf8526 543 Pfam PF06418 CTP synthase N-terminus 16 280 4.1E-133 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tph_c27870 c88001a14300a11593958595f7bf8526 543 SUPERFAMILY SSF52540 15 283 2.26E-127 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27870 c88001a14300a11593958595f7bf8526 543 Hamap MF_01227 CTP synthase [pyrG]. 15 543 52.562 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Tph_c17850 8c6e34cc8a616795f66acefd95a60426 219 Gene3D G3DSA:3.40.50.720 5 170 2.5E-41 T 14-10-2018 Tph_c17850 8c6e34cc8a616795f66acefd95a60426 219 TIGRFAM TIGR02354 thiF_fam2: thiamine biosynthesis protein ThiF 10 201 3.4E-51 T 14-10-2018 IPR012729 Thiamine biosynthesis protein ThiF Tph_c17850 8c6e34cc8a616795f66acefd95a60426 219 Pfam PF00899 ThiF family 15 154 7.6E-33 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Tph_c17850 8c6e34cc8a616795f66acefd95a60426 219 SUPERFAMILY SSF69572 13 205 2.22E-38 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Pfam PF02954 Bacterial regulatory protein, Fis family 625 665 4.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 631 648 1.0E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 648 668 1.0E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 331 1.4E-5 T 14-10-2018 IPR000014 PAS domain Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Pfam PF01590 GAF domain 73 195 1.5E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Gene3D G3DSA:3.30.450.40 20 207 4.6E-63 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Pfam PF00158 Sigma-54 interaction domain 347 514 1.7E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Gene3D G3DSA:1.10.8.60 520 599 4.6E-25 T 14-10-2018 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 SUPERFAMILY SSF55781 66 206 1.13E-9 T 14-10-2018 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Gene3D G3DSA:1.10.10.60 610 670 1.3E-12 T 14-10-2018 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 SMART SM00091 220 287 1.2E-6 T 14-10-2018 IPR000014 PAS domain Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Gene3D G3DSA:3.30.450.20 230 335 1.1E-18 T 14-10-2018 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Gene3D G3DSA:3.40.50.300 336 519 5.2E-66 T 14-10-2018 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 SUPERFAMILY SSF52540 346 592 1.08E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 Pfam PF00989 PAS fold 224 321 2.0E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 SUPERFAMILY SSF46689 561 667 7.53E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 371 384 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 434 449 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 SUPERFAMILY SSF55785 210 317 5.41E-14 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c21610 82c3c9943d99d483fd0fc1d7d5e52daf 672 SMART SM00382 367 511 8.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27250 ee1c90687c80057ec4ef272f732ce119 284 Gene3D G3DSA:1.20.120.420 1 111 1.1E-10 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tph_c27250 ee1c90687c80057ec4ef272f732ce119 284 Gene3D G3DSA:3.40.50.10470 112 274 3.9E-34 T 14-10-2018 Tph_c27250 ee1c90687c80057ec4ef272f732ce119 284 Pfam PF01008 Initiation factor 2 subunit family 16 242 8.2E-37 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Tph_c27250 ee1c90687c80057ec4ef272f732ce119 284 SUPERFAMILY SSF100950 6 277 2.6E-46 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tph_c25260 f4575617080a3c863792f68b7e15528f 340 PIRSF PIRSF037420 3 223 6.1E-38 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tph_c25260 f4575617080a3c863792f68b7e15528f 340 PIRSF PIRSF037420 238 339 2.7E-21 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tph_c25260 f4575617080a3c863792f68b7e15528f 340 Gene3D G3DSA:3.20.20.70 7 337 1.7E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c25260 f4575617080a3c863792f68b7e15528f 340 Pfam PF13186 Iron-sulfur cluster-binding domain 241 302 1.1E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c25260 f4575617080a3c863792f68b7e15528f 340 SUPERFAMILY SSF102114 6 311 9.94E-66 T 14-10-2018 Tph_c25260 f4575617080a3c863792f68b7e15528f 340 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 329 3.0E-13 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c25260 f4575617080a3c863792f68b7e15528f 340 SMART SM00729 8 208 0.0064 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c25260 f4575617080a3c863792f68b7e15528f 340 Pfam PF04055 Radical SAM superfamily 13 169 2.1E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c25260 f4575617080a3c863792f68b7e15528f 340 Pfam PF13394 4Fe-4S single cluster domain 15 96 1.6E-7 T 14-10-2018 Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 SUPERFAMILY SSF51905 57 530 4.41E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 73 92 3.1E-5 T 14-10-2018 Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 475 497 3.1E-5 T 14-10-2018 Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 Gene3D G3DSA:3.50.50.60 72 528 2.1E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 Gene3D G3DSA:3.90.700.10 308 463 2.1E-109 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 Pfam PF00890 FAD binding domain 72 498 1.7E-47 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c13610 95a6040a851e3624f6d217adb52a3ac1 533 SUPERFAMILY SSF56425 325 470 6.54E-30 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c20980 5bc8ec1d6034a5403e42d5d88b3e8b40 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 102 3.8E-23 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD Tph_c01660 e35f256bd84c0ffb913aaf9fd14342ea 204 Gene3D G3DSA:3.40.50.150 3 204 3.4E-48 T 14-10-2018 Tph_c01660 e35f256bd84c0ffb913aaf9fd14342ea 204 SUPERFAMILY SSF53335 13 149 4.76E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c01660 e35f256bd84c0ffb913aaf9fd14342ea 204 Pfam PF08241 Methyltransferase domain 40 135 2.7E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Tph_c04020 4784198d5fbc829254bf97effc19d796 260 Pfam PF01522 Polysaccharide deacetylase 55 173 3.2E-35 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tph_c04020 4784198d5fbc829254bf97effc19d796 260 SUPERFAMILY SSF88713 47 239 5.87E-66 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tph_c04020 4784198d5fbc829254bf97effc19d796 260 Gene3D G3DSA:3.20.20.370 38 242 2.1E-71 T 14-10-2018 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Pfam PF14478 Domain of unknown function (DUF4430) 451 516 1.4E-10 T 14-10-2018 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Gene3D G3DSA:2.60.40.1080 335 412 1.7E-12 T 14-10-2018 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 SUPERFAMILY SSF49373 335 408 1.02E-5 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 SMART SM00635 332 407 0.0027 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 SUPERFAMILY SSF81853 45 310 6.02E-17 T 14-10-2018 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Gene3D G3DSA:1.50.10.20 111 334 1.1E-14 T 14-10-2018 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Gene3D G3DSA:3.10.20.490 441 518 8.1E-7 T 14-10-2018 Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Pfam PF00395 S-layer homology domain 964 1005 0.0057 T 14-10-2018 IPR001119 S-layer homology domain Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Pfam PF00395 S-layer homology domain 832 874 1.1E-9 T 14-10-2018 IPR001119 S-layer homology domain Tph_c03270 6d262103751f801a505a6e031a6d88b8 1019 Pfam PF00395 S-layer homology domain 892 935 3.0E-11 T 14-10-2018 IPR001119 S-layer homology domain Tph_c09420 8eff15f9307f309a3756aa0b5752ab34 361 Pfam PF05559 Protein of unknown function (DUF763) 4 318 2.8E-126 T 14-10-2018 IPR008482 Protein of unknown function DUF763 Tph_c16120 d33ef2b322662cefe4aba73bb1b58508 404 SUPERFAMILY SSF89550 7 246 2.35E-12 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c16120 d33ef2b322662cefe4aba73bb1b58508 404 Gene3D G3DSA:3.20.20.140 4 243 6.7E-13 T 14-10-2018 Tph_c16120 d33ef2b322662cefe4aba73bb1b58508 404 SUPERFAMILY SSF47781 313 373 3.5E-6 T 14-10-2018 IPR010994 RuvA domain 2-like Tph_c13710 bf3dde6c08fd5fb1efcc4ea1f5918107 138 Gene3D G3DSA:3.10.129.10 1 134 7.4E-53 T 14-10-2018 Tph_c13710 bf3dde6c08fd5fb1efcc4ea1f5918107 138 Pfam PF07977 FabA-like domain 4 124 1.3E-33 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tph_c13710 bf3dde6c08fd5fb1efcc4ea1f5918107 138 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 131 1.6E-53 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tph_c13710 bf3dde6c08fd5fb1efcc4ea1f5918107 138 SUPERFAMILY SSF54637 2 131 7.08E-43 T 14-10-2018 IPR029069 HotDog domain superfamily Tph_c13710 bf3dde6c08fd5fb1efcc4ea1f5918107 138 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 1 134 30.759 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tph_c07610 d155e47ea1752e4e4cb170ed0eb66d97 612 Gene3D G3DSA:3.40.50.300 48 220 1.3E-5 T 14-10-2018 Tph_c07610 d155e47ea1752e4e4cb170ed0eb66d97 612 Gene3D G3DSA:3.40.50.300 311 522 1.9E-36 T 14-10-2018 Tph_c07610 d155e47ea1752e4e4cb170ed0eb66d97 612 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 95 517 2.6E-42 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Tph_c07610 d155e47ea1752e4e4cb170ed0eb66d97 612 SUPERFAMILY SSF52540 88 510 1.5E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23750 70f98ca9bc07acb994ec0df8d9692e57 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 265 1.4E-48 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 Pfam PF00453 Ribosomal protein L20 3 109 6.7E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 7.0E-19 T 14-10-2018 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.456 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.2E-40 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.2E-40 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.2E-40 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 Gene3D G3DSA:1.10.1900.20 56 119 9.0E-30 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.8E-48 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 SUPERFAMILY SSF74731 3 116 3.01E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13330 63ef4c86fd1618de2a53dd3c15b4e0b8 119 Gene3D G3DSA:1.10.720.90 2 55 2.1E-24 T 14-10-2018 Tph_c15460 7411881cac9c27e866aceb11c38d0a2c 281 Gene3D G3DSA:1.10.600.10 113 231 1.3E-11 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c15460 7411881cac9c27e866aceb11c38d0a2c 281 SUPERFAMILY SSF48576 83 230 4.6E-9 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Tph_c15460 7411881cac9c27e866aceb11c38d0a2c 281 Pfam PF00348 Polyprenyl synthetase 129 229 5.1E-5 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Tph_c13390 ff1a5b24f215042352beb310c22bf383 317 SUPERFAMILY SSF102705 51 301 1.57E-9 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily Tph_c14210 efdf92067481efb3022954d8efa43a46 235 SUPERFAMILY SSF51366 2 214 8.99E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Tph_c14210 efdf92067481efb3022954d8efa43a46 235 Gene3D G3DSA:3.20.20.70 1 218 8.0E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c14210 efdf92067481efb3022954d8efa43a46 235 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tph_c14210 efdf92067481efb3022954d8efa43a46 235 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 210 1.1E-79 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tph_c14210 efdf92067481efb3022954d8efa43a46 235 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tph_c14210 efdf92067481efb3022954d8efa43a46 235 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 200 2.8E-79 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tph_c14210 efdf92067481efb3022954d8efa43a46 235 PIRSF PIRSF001461 1 225 7.4E-85 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Tph_c16250 af05ab3a469184d13c83227afa2379cb 255 Pfam PF01728 FtsJ-like methyltransferase 34 214 4.0E-23 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Tph_c16250 af05ab3a469184d13c83227afa2379cb 255 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 2 210 1.4E-68 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Tph_c16250 af05ab3a469184d13c83227afa2379cb 255 SUPERFAMILY SSF53335 33 215 6.47E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c16250 af05ab3a469184d13c83227afa2379cb 255 Gene3D G3DSA:3.40.50.150 37 252 3.0E-78 T 14-10-2018 Tph_c16250 af05ab3a469184d13c83227afa2379cb 255 Gene3D G3DSA:3.10.290.10 1 36 9.2E-6 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tph_c16250 af05ab3a469184d13c83227afa2379cb 255 PIRSF PIRSF005578 1 237 2.4E-89 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Tph_c27040 de976461924e7c3167da3eb9cbea724d 473 Gene3D G3DSA:1.10.4160.10 2 469 2.0E-110 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Tph_c27040 de976461924e7c3167da3eb9cbea724d 473 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 17 431 2.4E-54 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Tph_c00920 17dcfe9ad1ed4b076fe843d5bf9701d7 74 SUPERFAMILY SSF54786 4 73 1.53E-18 T 14-10-2018 Tph_c00920 17dcfe9ad1ed4b076fe843d5bf9701d7 74 Gene3D G3DSA:3.30.920.30 5 73 1.8E-19 T 14-10-2018 IPR038570 HicA superfamily Tph_c00920 17dcfe9ad1ed4b076fe843d5bf9701d7 74 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 9 65 9.3E-20 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 Tph_c11690 e46204034caecb09cabecc0fd418e1f8 200 SUPERFAMILY SSF52540 7 182 1.04E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c11690 e46204034caecb09cabecc0fd418e1f8 200 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 7 180 2.9E-57 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Tph_c11690 e46204034caecb09cabecc0fd418e1f8 200 Gene3D G3DSA:3.40.50.300 6 182 6.2E-58 T 14-10-2018 Tph_c11690 e46204034caecb09cabecc0fd418e1f8 200 PIRSF PIRSF006135 5 184 1.3E-53 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Tph_c00350 fbef1d338b6420a6903ba7efaa19055d 443 SUPERFAMILY SSF51445 42 383 7.37E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c00350 fbef1d338b6420a6903ba7efaa19055d 443 Gene3D G3DSA:3.20.20.80 33 388 3.3E-33 T 14-10-2018 Tph_c12540 e4bac3c28ffbee68bab58f8a889b6d0c 359 Gene3D G3DSA:3.20.20.210 79 357 2.8E-17 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tph_c12540 e4bac3c28ffbee68bab58f8a889b6d0c 359 SUPERFAMILY SSF51726 124 350 9.94E-16 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 8 205 2.8E-68 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 Gene3D G3DSA:3.60.9.10 3 211 1.3E-74 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 Gene3D G3DSA:1.10.599.10 241 617 6.7E-107 T 14-10-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 Gene3D G3DSA:1.10.569.10 242 432 6.7E-107 T 14-10-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 SUPERFAMILY SSF56228 5 206 3.14E-64 T 14-10-2018 IPR036503 Aldehyde ferredoxin oxidoreductase, N-terminal domain superfamily Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 SUPERFAMILY SSF48310 215 620 8.76E-94 T 14-10-2018 IPR036021 Aldehyde ferredoxin oxidoreductase-like, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 222 617 2.1E-106 T 14-10-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c20350 cf9cca9cc069dc1fe3e87c9caff8218c 630 SMART SM00790 5 206 6.4E-92 T 14-10-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 Tph_c22110 64c35157c9ef89da7b531847100c1562 237 Gene3D G3DSA:1.10.3720.10 2 231 3.3E-62 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c22110 64c35157c9ef89da7b531847100c1562 237 SUPERFAMILY SSF161098 9 218 7.19E-51 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c22110 64c35157c9ef89da7b531847100c1562 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 97 2.9E-23 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 Tph_c22110 64c35157c9ef89da7b531847100c1562 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 229 6.6E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c03220 7b94ff5bbcc6330c98ef81f47858b9e5 251 Gene3D G3DSA:1.10.1760.20 54 220 5.7E-14 T 14-10-2018 Tph_c03220 7b94ff5bbcc6330c98ef81f47858b9e5 251 PIRSF PIRSF037395 8 231 2.6E-54 T 14-10-2018 IPR017196 ECF transporter, predicted substrate-specific component UCP037395 Tph_c03220 7b94ff5bbcc6330c98ef81f47858b9e5 251 Pfam PF12822 ECF transporter, substrate-specific component 60 210 2.1E-9 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 Tph_c04600 1c97aeecbf0d39349ae055bc298a8218 189 SUPERFAMILY SSF58104 21 186 3.53E-35 T 14-10-2018 Tph_c04600 1c97aeecbf0d39349ae055bc298a8218 189 Gene3D G3DSA:1.10.287.950 11 189 6.5E-32 T 14-10-2018 Tph_c04600 1c97aeecbf0d39349ae055bc298a8218 189 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 75 185 1.5E-23 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c04600 1c97aeecbf0d39349ae055bc298a8218 189 SMART SM00283 15 189 6.2E-4 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c24270 b6f31779ae302d995a22c90d3c00f79e 335 Pfam PF13817 IS66 C-terminal element 286 326 5.0E-16 T 14-10-2018 IPR039552 Transposase IS66, C-terminal Tph_c24270 b6f31779ae302d995a22c90d3c00f79e 335 Pfam PF03050 Transposase IS66 family 1 280 3.8E-99 T 14-10-2018 IPR004291 Transposase, IS66 Tph_c24570 276ec0ed863138f223a8421d5dcc50c3 297 Pfam PF09002 Domain of unknown function (DUF1887) 5 131 4.1E-15 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 Tph_c24570 276ec0ed863138f223a8421d5dcc50c3 297 Gene3D G3DSA:3.40.50.10770 3 131 3.8E-11 T 14-10-2018 Tph_c24570 276ec0ed863138f223a8421d5dcc50c3 297 SUPERFAMILY SSF52980 4 293 1.06E-41 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Tph_c20500 4a2f493c97a8dbf797176a159f0cb7cf 236 Pfam PF04893 Yip1 domain 17 218 8.9E-13 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 Gene3D G3DSA:3.30.450.20 138 277 1.5E-19 T 14-10-2018 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 Gene3D G3DSA:3.30.70.270 441 608 6.5E-51 T 14-10-2018 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 SMART SM00267 439 612 1.4E-50 T 14-10-2018 IPR000160 GGDEF domain Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 150 271 7.9E-17 T 14-10-2018 IPR000014 PAS domain Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 SUPERFAMILY SSF55781 260 438 1.88E-26 T 14-10-2018 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 Pfam PF13185 GAF domain 293 438 1.4E-21 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 SMART SM00065 294 447 5.7E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 SUPERFAMILY SSF55073 455 605 7.45E-39 T 14-10-2018 IPR029787 Nucleotide cyclase Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 446 607 7.3E-47 T 14-10-2018 IPR000160 GGDEF domain Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 Pfam PF08448 PAS fold 157 267 9.1E-8 T 14-10-2018 IPR013656 PAS fold-4 Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 SUPERFAMILY SSF55785 156 267 2.66E-13 T 14-10-2018 IPR035965 PAS domain superfamily Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 450 607 1.4E-44 T 14-10-2018 IPR000160 GGDEF domain Tph_c03090 e52c83b8545e1d5518d0c5d3bc4795ff 612 Gene3D G3DSA:3.30.450.40 279 440 1.9E-28 T 14-10-2018 IPR029016 GAF-like domain superfamily Tph_c23040 29771d7d910b73eef2b0172b44191378 450 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 157 314 8.8E-27 T 14-10-2018 IPR007119 Phage minor structural protein, N-terminal domain Tph_c23040 29771d7d910b73eef2b0172b44191378 450 Pfam PF06605 Prophage endopeptidase tail 45 329 6.4E-35 T 14-10-2018 IPR010572 Prophage tail endopeptidase Tph_c26210 104310c5982b03455b59dbef7388cdc9 362 Gene3D G3DSA:3.40.50.720 124 263 3.2E-19 T 14-10-2018 Tph_c26210 104310c5982b03455b59dbef7388cdc9 362 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 141 254 1.7E-12 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Tph_c26210 104310c5982b03455b59dbef7388cdc9 362 SUPERFAMILY SSF51735 135 256 1.72E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 SUPERFAMILY SSF53681 117 270 3.53E-40 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 Hamap MF_00258 Glutamate racemase [murI]. 12 264 37.85 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 Pfam PF01177 Asp/Glu/Hydantoin racemase 14 223 7.8E-37 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 188 198 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 Gene3D G3DSA:3.40.50.1860 103 215 3.0E-91 T 14-10-2018 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 Gene3D G3DSA:3.40.50.1860 14 262 3.0E-91 T 14-10-2018 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 TIGRFAM TIGR00067 glut_race: glutamate racemase 14 251 9.1E-75 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c04130 91e029bf5019576d0f29122451cfa9c0 293 SUPERFAMILY SSF53681 13 115 1.5E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Tph_c25520 f7698c4c5a6d4a7afd53e83ffb55c7e0 253 SMART SM00646 129 239 2.9E-30 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tph_c25520 f7698c4c5a6d4a7afd53e83ffb55c7e0 253 SUPERFAMILY SSF53187 53 243 6.12E-53 T 14-10-2018 Tph_c25520 f7698c4c5a6d4a7afd53e83ffb55c7e0 253 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 55 239 6.2E-50 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tph_c25520 f7698c4c5a6d4a7afd53e83ffb55c7e0 253 Gene3D G3DSA:3.40.630.40 51 246 1.2E-57 T 14-10-2018 Tph_c09480 b763b6e9e6019ee629a2765d012e78dc 149 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 23 140 8.2E-28 T 14-10-2018 IPR010181 CGCAxxGCC motif Tph_c09480 b763b6e9e6019ee629a2765d012e78dc 149 SUPERFAMILY SSF48695 5 143 3.18E-15 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily Tph_c09480 b763b6e9e6019ee629a2765d012e78dc 149 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 23 136 1.1E-33 T 14-10-2018 IPR010181 CGCAxxGCC motif Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 59 404 7.3E-134 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 SUPERFAMILY SSF56672 63 398 1.33E-59 T 14-10-2018 Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 Pfam PF08388 Group II intron, maturase-specific domain 340 415 7.9E-20 T 14-10-2018 IPR013597 Group II intron, maturase-specific Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 178 196 9.3E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 110 123 9.3E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 236 249 9.3E-6 T 14-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 Tph_c10450 ba74a1a562f2709e58c0d68727198c25 470 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 115 321 4.3E-48 T 14-10-2018 IPR000477 Reverse transcriptase domain Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 141 8.0E-38 T 14-10-2018 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 PIRSF PIRSF001399 1 146 2.1E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 SUPERFAMILY SSF52304 3 145 1.7E-57 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 Pfam PF01220 Dehydroquinase class II 3 139 3.6E-58 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 65.326 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 Gene3D G3DSA:3.40.50.9100 1 146 6.1E-63 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c16500 a23daa8021ae2ecf38abbdde10f7b811 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 2.2E-59 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Tph_c27330 763f2b125bb56b4f13565d618a38307b 246 SMART SM00382 30 217 8.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27330 763f2b125bb56b4f13565d618a38307b 246 Gene3D G3DSA:3.40.50.300 4 244 4.5E-68 T 14-10-2018 Tph_c27330 763f2b125bb56b4f13565d618a38307b 246 SUPERFAMILY SSF52540 7 240 9.3E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27330 763f2b125bb56b4f13565d618a38307b 246 Pfam PF00005 ABC transporter 25 168 7.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c01500 21cff0fe67191fd7577426ee1f2c8d33 341 SUPERFAMILY SSF53218 169 311 1.57E-35 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c01500 21cff0fe67191fd7577426ee1f2c8d33 341 Gene3D G3DSA:3.90.105.10 1 56 2.3E-6 T 14-10-2018 Tph_c01500 21cff0fe67191fd7577426ee1f2c8d33 341 Pfam PF00994 Probable molybdopterin binding domain 175 303 3.4E-23 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01500 21cff0fe67191fd7577426ee1f2c8d33 341 SMART SM00852 174 306 6.9E-26 T 14-10-2018 IPR001453 MoaB/Mog domain Tph_c01500 21cff0fe67191fd7577426ee1f2c8d33 341 Gene3D G3DSA:3.40.980.10 134 309 9.0E-33 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 Gene3D G3DSA:3.40.50.2300 45 372 8.5E-108 T 14-10-2018 Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 Pfam PF13458 Periplasmic binding protein 43 388 1.1E-67 T 14-10-2018 IPR028081 Leucine-binding protein domain Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 Gene3D G3DSA:3.40.50.2300 167 297 8.5E-108 T 14-10-2018 Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 SUPERFAMILY SSF53822 42 393 1.92E-97 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 356 371 1.0E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 44 60 1.0E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 85 103 1.0E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 106 116 1.0E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c00450 76fb72dc4f4caf54fcd1130c2d5bb734 400 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 66 82 1.0E-10 T 14-10-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 Tph_c11620 1f8cd0116b44e878d07b2c9149d4c046 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 1.3E-39 T 14-10-2018 IPR007347 Sporulation stage V, protein S Tph_c11620 1f8cd0116b44e878d07b2c9149d4c046 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 5.0E-38 T 14-10-2018 IPR007347 Sporulation stage V, protein S Tph_c11620 1f8cd0116b44e878d07b2c9149d4c046 86 Gene3D G3DSA:3.30.110.20 1 86 2.0E-35 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 6 242 4.3E-98 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 188 4.1E-5 T 14-10-2018 Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 Gene3D G3DSA:3.40.50.720 1 243 3.2E-95 T 14-10-2018 Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.6E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 SUPERFAMILY SSF51735 2 242 2.16E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.6E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Tph_c13730 12742bca91681be1573344f7e4c8c00a 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 242 9.0E-76 T 14-10-2018 Tph_c20330 194ad671c39f2107831b83218779a313 467 Pfam PF00474 Sodium:solute symporter family 30 418 1.3E-52 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tph_c20330 194ad671c39f2107831b83218779a313 467 Gene3D G3DSA:1.20.1730.10 5 466 3.3E-83 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tph_c20330 194ad671c39f2107831b83218779a313 467 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 400 420 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site Tph_c12220 466d5733ed0c440aa56cfa8d36ce9b9d 258 Pfam PF13276 HTH-like domain 46 95 1.7E-18 T 14-10-2018 IPR025948 HTH-like domain Tph_c12220 466d5733ed0c440aa56cfa8d36ce9b9d 258 SUPERFAMILY SSF53098 119 251 2.28E-30 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c12220 466d5733ed0c440aa56cfa8d36ce9b9d 258 Pfam PF00665 Integrase core domain 120 224 2.6E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c12220 466d5733ed0c440aa56cfa8d36ce9b9d 258 Gene3D G3DSA:3.30.420.10 116 257 3.1E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c13480 86f4939e258696944ba5e46818ff9f03 296 Pfam PF01937 Protein of unknown function DUF89 3 279 7.5E-49 T 14-10-2018 IPR002791 Domain of unknown function DUF89 Tph_c13480 86f4939e258696944ba5e46818ff9f03 296 PIRSF PIRSF006593 1 288 6.9E-75 T 14-10-2018 IPR014444 Uncharacterised conserved protein UCP006593 Tph_c13480 86f4939e258696944ba5e46818ff9f03 296 Gene3D G3DSA:3.40.50.10880 137 288 1.7E-47 T 14-10-2018 Tph_c13480 86f4939e258696944ba5e46818ff9f03 296 Gene3D G3DSA:1.10.285.20 68 136 2.7E-18 T 14-10-2018 Tph_c13480 86f4939e258696944ba5e46818ff9f03 296 SUPERFAMILY SSF111321 1 285 1.7E-73 T 14-10-2018 IPR036075 AF1104-like superfamily Tph_c25390 9acb9035c4a822e7025639b6fc872a89 795 Gene3D G3DSA:3.40.50.300 538 787 4.0E-14 T 14-10-2018 Tph_c25390 9acb9035c4a822e7025639b6fc872a89 795 SUPERFAMILY SSF52540 9 772 1.86E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 4 367 2.2E-158 T 14-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 190 203 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 SUPERFAMILY SSF51569 2 279 1.83E-90 T 14-10-2018 Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 Pfam PF00682 HMGL-like 3 261 2.3E-83 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 Gene3D G3DSA:3.20.20.70 1 266 1.0E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c09000 1fabd81e33fa675ee27c010bbfffa181 382 Gene3D G3DSA:1.10.238.260 268 381 1.4E-31 T 14-10-2018 Tph_c10630 af1d42b02a8865756957c95359d90876 81 Gene3D G3DSA:1.25.40.10 7 80 1.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c10630 af1d42b02a8865756957c95359d90876 81 SUPERFAMILY SSF48452 6 77 6.64E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c23510 f517255975c76cfa5d13e1cbd0fb99f4 269 Pfam PF04055 Radical SAM superfamily 25 190 2.9E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c23510 f517255975c76cfa5d13e1cbd0fb99f4 269 Gene3D G3DSA:3.80.30.30 63 260 6.9E-7 T 14-10-2018 Tph_c23510 f517255975c76cfa5d13e1cbd0fb99f4 269 SUPERFAMILY SSF102114 20 233 2.09E-13 T 14-10-2018 Tph_c23510 f517255975c76cfa5d13e1cbd0fb99f4 269 SMART SM00729 20 239 0.0032 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c10880 6e0d85a154dfb7361d3cc26f5dddd9e2 439 Gene3D G3DSA:3.30.750.140 293 394 4.5E-17 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily Tph_c10880 6e0d85a154dfb7361d3cc26f5dddd9e2 439 Pfam PF02120 Flagellar hook-length control protein FliK 315 387 1.2E-16 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal Tph_c20050 7ba71032bd8de55b58e2d37b3bdb0f98 184 SUPERFAMILY SSF109604 2 153 1.35E-36 T 14-10-2018 Tph_c20050 7ba71032bd8de55b58e2d37b3bdb0f98 184 Pfam PF01966 HD domain 2 117 4.2E-22 T 14-10-2018 IPR006674 HD domain Tph_c20050 7ba71032bd8de55b58e2d37b3bdb0f98 184 SMART SM00471 1 126 2.6E-6 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c20050 7ba71032bd8de55b58e2d37b3bdb0f98 184 TIGRFAM TIGR00277 HDIG: HDIG domain 1 85 1.1E-10 T 14-10-2018 IPR006675 HDIG domain Tph_c20050 7ba71032bd8de55b58e2d37b3bdb0f98 184 Gene3D G3DSA:1.10.3210.10 1 169 2.6E-64 T 14-10-2018 Tph_c24920 2a705841f72da6cd286fa29e6b0e1886 95 Gene3D G3DSA:3.10.105.10 2 94 1.4E-16 T 14-10-2018 Tph_c24920 2a705841f72da6cd286fa29e6b0e1886 95 SUPERFAMILY SSF53850 2 94 2.53E-14 T 14-10-2018 Tph_c01640 1064f31366c8cf41a5f110722bbf5bfa 153 SUPERFAMILY SSF50800 1 148 1.26E-40 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tph_c01640 1064f31366c8cf41a5f110722bbf5bfa 153 Gene3D G3DSA:2.40.33.20 1 153 1.5E-35 T 14-10-2018 Tph_c19910 8cec326391e0222774abf7aac9c85f1c 137 Gene3D G3DSA:1.20.1260.10 1 74 2.0E-12 T 14-10-2018 IPR012347 Ferritin-like Tph_c19910 8cec326391e0222774abf7aac9c85f1c 137 Gene3D G3DSA:1.20.1260.10 75 137 4.8E-10 T 14-10-2018 IPR012347 Ferritin-like Tph_c19910 8cec326391e0222774abf7aac9c85f1c 137 SUPERFAMILY SSF47240 12 136 1.45E-32 T 14-10-2018 IPR009078 Ferritin-like superfamily Tph_c19910 8cec326391e0222774abf7aac9c85f1c 137 Pfam PF02915 Rubrerythrin 23 132 9.7E-13 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 Tph_c15680 4dbe8f5a25a9c08c17b91307f9f3c977 84 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 45 2.3E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c15680 4dbe8f5a25a9c08c17b91307f9f3c977 84 SMART SM00834 1 42 1.8E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c15680 4dbe8f5a25a9c08c17b91307f9f3c977 84 Pfam PF09723 Zinc ribbon domain 1 40 2.2E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Tph_c26670 e2a9792988761415f1601c37ffdf1309 807 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 41 771 20.744 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c26670 e2a9792988761415f1601c37ffdf1309 807 PIRSF PIRSF001265 36 778 6.1E-162 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c26670 e2a9792988761415f1601c37ffdf1309 807 Pfam PF03030 Inorganic H+ pyrophosphatase 52 765 1.6E-176 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 139 233 2.6E-4 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 SUPERFAMILY SSF81296 137 253 2.97E-9 T 14-10-2018 IPR014756 Immunoglobulin E-set Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Gene3D G3DSA:3.20.20.80 253 625 3.5E-78 T 14-10-2018 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 SMART SM00642 273 617 1.6E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Gene3D G3DSA:2.60.40.1110 2 99 1.5E-7 T 14-10-2018 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 SUPERFAMILY SSF51445 248 623 1.58E-84 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Tph_c26480 04ce1c27a264412dfe128d7783119730 746 SUPERFAMILY SSF49452 4 100 3.36E-8 T 14-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Pfam PF00128 Alpha amylase, catalytic domain 292 377 7.1E-17 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Pfam PF00128 Alpha amylase, catalytic domain 404 586 1.6E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Gene3D G3DSA:2.60.40.10 137 252 4.3E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c26480 04ce1c27a264412dfe128d7783119730 746 Pfam PF03714 Bacterial pullanase-associated domain 5 97 4.1E-8 T 14-10-2018 IPR005323 Pullulanase, carbohydrate-binding module 41 GO:0005975|GO:0030246 Tph_c22540 03768258deca62e0ad7b38a79802fe14 219 Pfam PF01902 Diphthamide synthase 13 207 8.0E-47 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 Tph_c22540 03768258deca62e0ad7b38a79802fe14 219 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 13 217 4.7E-46 T 14-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 Tph_c22540 03768258deca62e0ad7b38a79802fe14 219 Gene3D G3DSA:3.90.1490.10 145 219 3.3E-8 T 14-10-2018 Tph_c22540 03768258deca62e0ad7b38a79802fe14 219 SUPERFAMILY SSF52402 9 218 4.85E-62 T 14-10-2018 Tph_c22540 03768258deca62e0ad7b38a79802fe14 219 PIRSF PIRSF039123 6 219 1.2E-65 T 14-10-2018 IPR030662 Diphthine--ammonia ligase/Uncharacterised protein MJ0570 MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 Tph_c22540 03768258deca62e0ad7b38a79802fe14 219 Gene3D G3DSA:3.40.50.620 4 144 1.6E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 Gene3D G3DSA:3.30.70.120 1 112 2.6E-39 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 SMART SM00938 4 105 2.8E-40 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-26 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-26 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-26 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-26 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 SUPERFAMILY SSF54913 3 112 6.99E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Tph_c08760 f37a2497b77ea3ad19a93829713f0867 112 Pfam PF00543 Nitrogen regulatory protein P-II 5 105 2.3E-32 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 Tph_c17900 4d844800b7f2bf93c89f9484e2fdf6b5 404 Gene3D G3DSA:1.20.1250.20 2 184 3.0E-19 T 14-10-2018 Tph_c17900 4d844800b7f2bf93c89f9484e2fdf6b5 404 SUPERFAMILY SSF103473 6 389 2.35E-54 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c17900 4d844800b7f2bf93c89f9484e2fdf6b5 404 Pfam PF07690 Major Facilitator Superfamily 17 338 2.5E-31 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c17900 4d844800b7f2bf93c89f9484e2fdf6b5 404 Gene3D G3DSA:1.20.1250.20 211 393 6.9E-25 T 14-10-2018 Tph_c05080 11f5c0d72b9c727855ec41690b9a07f5 127 SMART SM00448 3 116 3.4E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05080 11f5c0d72b9c727855ec41690b9a07f5 127 Pfam PF00072 Response regulator receiver domain 5 114 2.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05080 11f5c0d72b9c727855ec41690b9a07f5 127 SUPERFAMILY SSF52172 3 115 6.83E-28 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c05080 11f5c0d72b9c727855ec41690b9a07f5 127 Gene3D G3DSA:3.40.50.12740 2 125 8.6E-30 T 14-10-2018 Tph_c23460 9cf63387befb03611389436306321ed1 136 Gene3D G3DSA:3.90.1010.10 3 136 1.9E-50 T 14-10-2018 Tph_c23460 9cf63387befb03611389436306321ed1 136 SUPERFAMILY SSF82649 6 128 9.94E-40 T 14-10-2018 Tph_c23460 9cf63387befb03611389436306321ed1 136 Pfam PF01592 NifU-like N terminal domain 4 124 8.1E-36 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Tph_c10620 9d277baaf128912f1a2b7abbdc6efe28 278 Pfam PF06386 Gas vesicle synthesis protein GvpL/GvpF 21 269 3.0E-65 T 14-10-2018 IPR009430 Gas vesicle protein GvpL/GvpF GO:0031411|GO:0031412 Tph_c08030 3d87d4e534a7c48d0c6ba8f9f048172d 182 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 182 14.438 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c08030 3d87d4e534a7c48d0c6ba8f9f048172d 182 Pfam PF02660 Glycerol-3-phosphate acyltransferase 8 179 8.2E-46 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c08030 3d87d4e534a7c48d0c6ba8f9f048172d 182 SMART SM01207 7 181 5.2E-44 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 Tph_c24170 b1eea4f6fc4bf603ec10854cccd1491d 107 Pfam PF01527 Transposase 3 83 1.0E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c24170 b1eea4f6fc4bf603ec10854cccd1491d 107 SUPERFAMILY SSF46689 2 97 2.15E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 Pfam PF13337 Putative ATP-dependent Lon protease 13 473 3.8E-182 T 14-10-2018 IPR014061 Conserved hypothetical protein CHP02688 Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 520 679 3.4E-5 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 Gene3D G3DSA:3.30.230.10 501 680 2.2E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 5 680 3.4E-191 T 14-10-2018 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 SUPERFAMILY SSF52540 185 355 2.28E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 12 461 7.7E-142 T 14-10-2018 IPR014061 Conserved hypothetical protein CHP02688 Tph_c21990 215a30df5803ccfeee3ee098cc2ed0d1 682 SUPERFAMILY SSF54211 503 676 6.83E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c22170 983344a9ac75ce379e9f6e9870c30cb4 234 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 23 219 7.7E-30 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Tph_c09410 92bea00e99107aec97d0143f571c7dc7 405 SUPERFAMILY SSF101960 72 398 9.15E-78 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Tph_c09410 92bea00e99107aec97d0143f571c7dc7 405 Pfam PF01458 Uncharacterized protein family (UPF0051) 154 377 4.0E-54 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 SUPERFAMILY SSF54570 3 84 1.96E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 PIRSF PIRSF002144 1 94 3.6E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.604 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 89 2.6E-44 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.2E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 Gene3D G3DSA:3.30.860.10 1 92 8.6E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25810 357143e80fb68d53929bfdfff4cca36a 94 Pfam PF00203 Ribosomal protein S19 3 83 1.6E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c24990 7e97e9b9fda7bd92538b305ee1a3bfc8 326 Gene3D G3DSA:1.10.3720.10 91 314 2.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c24990 7e97e9b9fda7bd92538b305ee1a3bfc8 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 322 1.3E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c24990 7e97e9b9fda7bd92538b305ee1a3bfc8 326 SUPERFAMILY SSF161098 97 308 3.27E-17 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 Gene3D G3DSA:1.10.10.2600 163 309 2.0E-21 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 SMART SM00857 29 178 7.4E-50 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 SUPERFAMILY SSF53041 28 177 8.5E-38 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 Pfam PF13408 Recombinase zinc beta ribbon domain 328 387 1.7E-7 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 Pfam PF07508 Recombinase 200 305 1.9E-24 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 Gene3D G3DSA:3.40.50.1390 23 160 6.9E-55 T 14-10-2018 Tph_c23370 e2c3c18dc7191e1690a2b36799f7b544 522 Pfam PF00239 Resolvase, N terminal domain 29 177 1.6E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c23800 3f687f6b10469966b7a181256a663754 469 Gene3D G3DSA:3.40.50.12780 42 368 2.3E-114 T 14-10-2018 Tph_c23800 3f687f6b10469966b7a181256a663754 469 Pfam PF14535 AMP-binding enzyme C-terminal domain 377 467 1.9E-23 T 14-10-2018 IPR028154 AMP-dependent ligase, C-terminal Tph_c23800 3f687f6b10469966b7a181256a663754 469 SUPERFAMILY SSF56801 79 437 3.14E-51 T 14-10-2018 Tph_c23800 3f687f6b10469966b7a181256a663754 469 PIRSF PIRSF006444 42 469 2.9E-145 T 14-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 Tph_c23800 3f687f6b10469966b7a181256a663754 469 Gene3D G3DSA:3.30.300.30 369 469 2.2E-23 T 14-10-2018 Tph_c23800 3f687f6b10469966b7a181256a663754 469 Pfam PF00501 AMP-binding enzyme 105 328 1.2E-13 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Tph_c26020 aa140ad32a2582fe888a3a591fcea68e 81 Gene3D G3DSA:1.10.1220.10 1 43 1.2E-5 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 Tph_c01250 f3db5dadc95c0a9f44f67af8a1213bd1 282 Gene3D G3DSA:3.90.550.10 1 265 3.2E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c01250 f3db5dadc95c0a9f44f67af8a1213bd1 282 SUPERFAMILY SSF53448 7 239 7.5E-13 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c01250 f3db5dadc95c0a9f44f67af8a1213bd1 282 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 49 196 3.8E-17 T 14-10-2018 IPR018641 Transferase 1, rSAM/selenodomain-associated Tph_c07240 785535fb79fa878a0d3da1592eb64f18 186 Pfam PF14191 YodL-like 75 171 1.6E-34 T 14-10-2018 IPR025923 YodL-like Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 Gene3D G3DSA:3.30.499.10 270 418 5.0E-56 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 ProSitePatterns PS01244 Aconitase family signature 2. 349 362 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 PRINTS PR00415 Aconitase family signature 349 362 5.6E-17 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 PRINTS PR00415 Aconitase family signature 201 214 5.6E-17 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 PRINTS PR00415 Aconitase family signature 111 124 5.6E-17 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 PRINTS PR00415 Aconitase family signature 187 200 5.6E-17 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 PRINTS PR00415 Aconitase family signature 125 140 5.6E-17 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 Pfam PF00330 Aconitase family (aconitate hydratase) 24 408 7.2E-92 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 TIGRFAM TIGR02086 IPMI_arch: 3-isopropylmalate dehydratase, large subunit 3 415 5.9E-166 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 Hamap MF_01027 3-isopropylmalate dehydratase large subunit [leuC]. 3 416 48.433 T 14-10-2018 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 SUPERFAMILY SSF53732 2 416 3.01E-139 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 Gene3D G3DSA:3.30.499.20 4 267 1.6E-93 T 14-10-2018 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 ProSitePatterns PS00450 Aconitase family signature 1. 289 305 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Tph_c09010 97b9654eaa56df1da8f3e938b5717de0 418 TIGRFAM TIGR01343 hacA_fam: homoaconitate hydratase family protein 4 414 2.8E-171 T 14-10-2018 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit GO:0008652|GO:0016836|GO:0051539 KEGG: 00290+4.2.1.33 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 249 259 3.9E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 159 171 3.9E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 131 145 3.9E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 59 68 3.9E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 119 131 3.9E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 181 193 3.9E-23 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 233 258 1.5E-67 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 188 208 1.5E-67 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 61 80 1.5E-67 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 80 100 1.5E-67 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 209 230 1.5E-67 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 1.5E-67 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 63 259 2.4E-89 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 236 248 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 Pfam PF00813 FliP family 63 255 8.1E-83 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c10980 aa66db861e70f5cdaa7c511fd4d3896f 260 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 188 203 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Tph_c23200 d9e64947eb0c1f71515e5e50263844a7 155 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 11 110 3.4E-14 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Tph_c23200 d9e64947eb0c1f71515e5e50263844a7 155 SUPERFAMILY SSF110857 8 130 1.1E-22 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Tph_c23200 d9e64947eb0c1f71515e5e50263844a7 155 Gene3D G3DSA:3.10.490.10 1 154 7.0E-40 T 14-10-2018 Tph_c13170 896a29011c43b213560b5ec5c784b8cf 187 SUPERFAMILY SSF52266 5 182 2.44E-37 T 14-10-2018 Tph_c13170 896a29011c43b213560b5ec5c784b8cf 187 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 172 4.8E-23 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain Tph_c13170 896a29011c43b213560b5ec5c784b8cf 187 Gene3D G3DSA:3.40.50.1110 3 181 1.8E-46 T 14-10-2018 IPR036514 SGNH hydrolase superfamily Tph_c06610 9e71ebf10a6291086988e3ca03842e79 654 SUPERFAMILY SSF53067 3 290 4.75E-9 T 14-10-2018 Tph_c06610 9e71ebf10a6291086988e3ca03842e79 654 Pfam PF01968 Hydantoinase/oxoprolinase 178 320 7.8E-33 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Tph_c06610 9e71ebf10a6291086988e3ca03842e79 654 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 158 1.0E-27 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 Tph_c26830 18f036148829a4777b39cb78f5a12514 530 SMART SM00331 313 525 1.6E-32 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tph_c26830 18f036148829a4777b39cb78f5a12514 530 SUPERFAMILY SSF81606 314 524 1.66E-16 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tph_c26830 18f036148829a4777b39cb78f5a12514 530 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 341 524 1.5E-26 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tph_c26830 18f036148829a4777b39cb78f5a12514 530 Gene3D G3DSA:3.60.40.10 307 528 9.8E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Tph_c01540 1cb3f212a774f6db4ec2ae254790bf31 248 SUPERFAMILY SSF159713 1 245 1.11E-67 T 14-10-2018 Tph_c01540 1cb3f212a774f6db4ec2ae254790bf31 248 Gene3D G3DSA:3.40.50.11590 108 217 7.7E-84 T 14-10-2018 Tph_c01540 1cb3f212a774f6db4ec2ae254790bf31 248 Gene3D G3DSA:3.30.390.100 2 223 7.7E-84 T 14-10-2018 Tph_c01540 1cb3f212a774f6db4ec2ae254790bf31 248 Pfam PF13938 Putative heavy-metal chelation 5 84 2.2E-24 T 14-10-2018 IPR025251 Domain of unknown function DUF4213 Tph_c01540 1cb3f212a774f6db4ec2ae254790bf31 248 Pfam PF04016 Putative heavy-metal chelation 110 244 1.5E-38 T 14-10-2018 IPR007161 Putative heavy-metal chelation domain Tph_c09570 c970020adbeaa2619623cbac81ad95b2 257 Pfam PF12146 Serine aminopeptidase, S33 28 136 3.2E-13 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Tph_c09570 c970020adbeaa2619623cbac81ad95b2 257 SUPERFAMILY SSF53474 3 254 1.19E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tph_c09570 c970020adbeaa2619623cbac81ad95b2 257 Gene3D G3DSA:3.40.50.1820 1 255 1.4E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Tph_c06050 77b9a1c3e82fd2bb60baa3184481fdb0 222 Gene3D G3DSA:2.70.70.10 74 221 1.7E-24 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c06050 77b9a1c3e82fd2bb60baa3184481fdb0 222 SUPERFAMILY SSF51261 100 219 4.55E-26 T 14-10-2018 IPR011055 Duplicated hybrid motif Tph_c06050 77b9a1c3e82fd2bb60baa3184481fdb0 222 Pfam PF01551 Peptidase family M23 127 215 2.1E-17 T 14-10-2018 IPR016047 Peptidase M23 Tph_c04350 eb3d3064ad0a213a0d117e37fcbda243 412 Pfam PF07282 Putative transposase DNA-binding domain 322 371 3.6E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 Gene3D G3DSA:3.40.640.10 79 326 1.3E-153 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 Pfam PF00202 Aminotransferase class-III 47 441 1.2E-108 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 SUPERFAMILY SSF53383 42 443 1.75E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 Gene3D G3DSA:3.90.1150.10 21 440 1.3E-153 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 PIRSF PIRSF000521 35 148 6.3E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 PIRSF PIRSF000521 188 376 2.7E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 PIRSF PIRSF000521 139 173 1.4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c13270 f047193d8acec6a09f5bf55a5908269d 462 PIRSF PIRSF000521 400 445 0.27 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Tph_c00620 616b7ceeb645478cba9da76ddd44d900 288 SUPERFAMILY SSF103481 210 286 6.02E-10 T 14-10-2018 Tph_c00620 616b7ceeb645478cba9da76ddd44d900 288 SUPERFAMILY SSF103481 44 145 5.36E-15 T 14-10-2018 Tph_c00620 616b7ceeb645478cba9da76ddd44d900 288 Pfam PF00892 EamA-like transporter family 152 286 2.0E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c00620 616b7ceeb645478cba9da76ddd44d900 288 Pfam PF00892 EamA-like transporter family 8 142 2.9E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c20580 5bada877c51eaf9389910781883c5376 56 Gene3D G3DSA:1.10.260.50 17 47 2.9E-10 T 14-10-2018 Tph_c20580 5bada877c51eaf9389910781883c5376 56 SUPERFAMILY SSF53383 9 53 2.01E-5 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 Gene3D G3DSA:3.40.50.10800 94 307 9.2E-116 T 14-10-2018 Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 SUPERFAMILY SSF142754 12 308 5.49E-116 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 Hamap MF_00568 Quinolinate synthase A [nadA]. 10 308 44.071 T 14-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 Gene3D G3DSA:3.40.50.10800 178 264 9.2E-116 T 14-10-2018 Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 Pfam PF02445 Quinolinate synthetase A protein 14 307 3.0E-119 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 Gene3D G3DSA:3.40.50.10800 14 289 9.2E-116 T 14-10-2018 Tph_c26630 2d670026ad5b5b1b7176c3d09b8e17f4 309 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 12 309 4.0E-107 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Tph_c20250 2047f25480e09d750342773776363fc9 418 SUPERFAMILY SSF54826 1 160 1.59E-53 T 14-10-2018 Tph_c20250 2047f25480e09d750342773776363fc9 418 Gene3D G3DSA:3.20.20.120 166 413 5.0E-108 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tph_c20250 2047f25480e09d750342773776363fc9 418 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 410 2.1E-173 T 14-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Tph_c20250 2047f25480e09d750342773776363fc9 418 SUPERFAMILY SSF51604 165 411 1.3E-78 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Tph_c20250 2047f25480e09d750342773776363fc9 418 Gene3D G3DSA:3.30.390.10 1 165 6.5E-65 T 14-10-2018 IPR029017 Enolase-like, N-terminal Tph_c20250 2047f25480e09d750342773776363fc9 418 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 164 410 4.6E-122 T 14-10-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Tph_c20250 2047f25480e09d750342773776363fc9 418 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 160 6.6E-69 T 14-10-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Tph_c20250 2047f25480e09d750342773776363fc9 418 PIRSF PIRSF017107 1 413 7.1E-184 T 14-10-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 Tph_c24110 b0af783dfdc90c25bf5eb26549bd0fab 185 Gene3D G3DSA:3.40.50.300 56 162 2.4E-10 T 14-10-2018 Tph_c24110 b0af783dfdc90c25bf5eb26549bd0fab 185 Pfam PF01695 IstB-like ATP binding protein 71 153 1.5E-15 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c11700 825c877f67ce568698260876cdd4d6b6 244 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 3 238 7.0E-39 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tph_c11700 825c877f67ce568698260876cdd4d6b6 244 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 244 44.572 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tph_c11700 825c877f67ce568698260876cdd4d6b6 244 Pfam PF02654 Cobalamin-5-phosphate synthase 7 237 2.4E-55 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Tph_c12200 22a73347bea62a785f86d666a13ddb83 269 Gene3D G3DSA:3.30.457.10 189 251 2.7E-8 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c12200 22a73347bea62a785f86d666a13ddb83 269 SUPERFAMILY SSF55383 146 188 4.97E-8 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c12200 22a73347bea62a785f86d666a13ddb83 269 SUPERFAMILY SSF55383 190 261 1.83E-16 T 14-10-2018 IPR036582 Copper amine oxidase-like, N-terminal domain superfamily Tph_c12200 22a73347bea62a785f86d666a13ddb83 269 Pfam PF07833 Copper amine oxidase N-terminal domain 147 187 5.7E-6 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c12200 22a73347bea62a785f86d666a13ddb83 269 Pfam PF07833 Copper amine oxidase N-terminal domain 191 265 6.6E-18 T 14-10-2018 IPR012854 Copper amine oxidase-like, N-terminal Tph_c27160 c0e52599d7e07727c6d4c4f2654bee98 105 Pfam PF07875 Coat F domain 7 68 1.2E-22 T 14-10-2018 IPR012851 Spore coat protein CotF-like Tph_c13650 e122796f4352f518671e37314cd74d40 93 Pfam PF10719 Late competence development protein ComFB 5 86 8.2E-26 T 14-10-2018 IPR019657 Late competence development protein ComFB Tph_c05880 6c0392ab0ef43eb96f7cb6fc4779fd2d 479 Gene3D G3DSA:3.20.20.480 10 470 1.1E-146 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c05880 6c0392ab0ef43eb96f7cb6fc4779fd2d 479 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 5 466 2.5E-94 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c01880 8ed19a801111b1f24ecc7ffaaba58623 361 Pfam PF10776 Protein of unknown function (DUF2600) 30 356 2.3E-133 T 14-10-2018 IPR019712 Protein of unknown function DUF2600 Tph_c17230 d95453baf80305606bde1f40d73a7e2b 464 Pfam PF13808 DDE_Tnp_1-associated 52 137 6.1E-16 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal Tph_c22620 2a76d0f6631b57db1fdbbf642167897a 274 Gene3D G3DSA:3.40.190.10 120 224 2.6E-103 T 14-10-2018 Tph_c22620 2a76d0f6631b57db1fdbbf642167897a 274 Pfam PF03180 NLPA lipoprotein 39 274 4.6E-97 T 14-10-2018 IPR004872 Lipoprotein NlpA family Tph_c22620 2a76d0f6631b57db1fdbbf642167897a 274 Gene3D G3DSA:3.40.190.10 41 272 2.6E-103 T 14-10-2018 Tph_c22620 2a76d0f6631b57db1fdbbf642167897a 274 SUPERFAMILY SSF53850 38 274 1.4E-90 T 14-10-2018 Tph_c22620 2a76d0f6631b57db1fdbbf642167897a 274 PIRSF PIRSF002854 1 274 4.0E-112 T 14-10-2018 IPR004872 Lipoprotein NlpA family Tph_c23330 2b96c0a24691a60ad3bca37112c47859 435 Pfam PF00665 Integrase core domain 70 196 2.2E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c23330 2b96c0a24691a60ad3bca37112c47859 435 SUPERFAMILY SSF53098 70 235 6.45E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c17880 51bb2f662623c0f0d5e5f8cc4f1c36de 66 SUPERFAMILY SSF54285 2 65 2.47E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Tph_c17880 51bb2f662623c0f0d5e5f8cc4f1c36de 66 Pfam PF02597 ThiS family 8 66 1.5E-9 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Tph_c17880 51bb2f662623c0f0d5e5f8cc4f1c36de 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 5.7E-19 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis Tph_c17880 51bb2f662623c0f0d5e5f8cc4f1c36de 66 Gene3D G3DSA:3.10.20.30 3 66 2.3E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Tph_c08490 f8bb0ef9887cc905315790fb911beb50 239 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 5 194 8.5E-72 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Tph_c08490 f8bb0ef9887cc905315790fb911beb50 239 Gene3D G3DSA:3.40.50.170 1 210 1.2E-82 T 14-10-2018 Tph_c08490 f8bb0ef9887cc905315790fb911beb50 239 SUPERFAMILY SSF53328 4 207 1.31E-64 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tph_c08490 f8bb0ef9887cc905315790fb911beb50 239 Pfam PF00551 Formyl transferase 5 184 1.3E-56 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Tph_c08490 f8bb0ef9887cc905315790fb911beb50 239 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 190 32.7 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Tph_c08490 f8bb0ef9887cc905315790fb911beb50 239 PIRSF PIRSF036480 1 202 1.9E-45 T 14-10-2018 Tph_c01590 906da65500a8a51cc13cf420f35d9b71 243 Pfam PF04016 Putative heavy-metal chelation 139 229 3.8E-10 T 14-10-2018 IPR007161 Putative heavy-metal chelation domain Tph_c01590 906da65500a8a51cc13cf420f35d9b71 243 SUPERFAMILY SSF159713 81 230 5.1E-17 T 14-10-2018 Tph_c01590 906da65500a8a51cc13cf420f35d9b71 243 Gene3D G3DSA:3.40.50.11590 131 234 1.9E-6 T 14-10-2018 Tph_c13430 2420f19e9a0525ecb588bd40b479f5e0 854 Pfam PF01136 Peptidase family U32 80 306 3.3E-86 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tph_c13430 2420f19e9a0525ecb588bd40b479f5e0 854 Pfam PF01136 Peptidase family U32 620 839 3.3E-24 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tph_c13430 2420f19e9a0525ecb588bd40b479f5e0 854 Pfam PF12392 Collagenase 393 510 2.0E-21 T 14-10-2018 IPR020988 Peptidase U32, collagenase Tph_c23600 3d5e698048947e51c7354d4abe4067c4 235 Pfam PF00005 ABC transporter 29 177 4.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c23600 3d5e698048947e51c7354d4abe4067c4 235 Gene3D G3DSA:3.40.50.300 7 233 5.0E-73 T 14-10-2018 Tph_c23600 3d5e698048947e51c7354d4abe4067c4 235 SUPERFAMILY SSF52540 9 230 1.18E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23600 3d5e698048947e51c7354d4abe4067c4 235 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c23600 3d5e698048947e51c7354d4abe4067c4 235 SMART SM00382 38 225 3.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c00410 304c4f4142dd7053c00a4189ea4a6455 79 Pfam PF03698 Uncharacterised protein family (UPF0180) 4 77 1.8E-24 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 Tph_c17200 07d44aebcfc95e20c3a76cc4057e7a47 439 PIRSF PIRSF006815 1 437 7.6E-179 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Tph_c17200 07d44aebcfc95e20c3a76cc4057e7a47 439 Pfam PF02347 Glycine cleavage system P-protein 3 434 4.3E-139 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Tph_c17200 07d44aebcfc95e20c3a76cc4057e7a47 439 Gene3D G3DSA:3.90.1150.10 71 434 9.0E-155 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c17200 07d44aebcfc95e20c3a76cc4057e7a47 439 Gene3D G3DSA:3.40.640.10 82 348 9.0E-155 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c17200 07d44aebcfc95e20c3a76cc4057e7a47 439 SUPERFAMILY SSF53383 1 434 4.26E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c17200 07d44aebcfc95e20c3a76cc4057e7a47 439 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 437 47.112 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Tph_c23930 003ae9d98fc732a5e5c1f80ed6be4faf 447 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 4 425 3.1E-124 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tph_c23930 003ae9d98fc732a5e5c1f80ed6be4faf 447 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 400 7.5E-128 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 Tph_c23930 003ae9d98fc732a5e5c1f80ed6be4faf 447 Gene3D G3DSA:3.40.1670.10 311 424 1.1E-34 T 14-10-2018 Tph_c23930 003ae9d98fc732a5e5c1f80ed6be4faf 447 SUPERFAMILY SSF143968 298 428 1.22E-35 T 14-10-2018 Tph_c23930 003ae9d98fc732a5e5c1f80ed6be4faf 447 SUPERFAMILY SSF50475 3 294 1.33E-97 T 14-10-2018 Tph_c15960 f37a5b9a5ca6b2f0b462bbce174af4b2 372 Gene3D G3DSA:3.40.50.11900 288 361 7.9E-6 T 14-10-2018 Tph_c12780 2ffc7868235eab584a370670ab729754 589 Gene3D G3DSA:3.40.50.150 28 329 2.9E-62 T 14-10-2018 Tph_c12780 2ffc7868235eab584a370670ab729754 589 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 62 68 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tph_c12780 2ffc7868235eab584a370670ab729754 589 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 245 267 3.6E-18 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tph_c12780 2ffc7868235eab584a370670ab729754 589 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 114 133 3.6E-18 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tph_c12780 2ffc7868235eab584a370670ab729754 589 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 268 282 3.6E-18 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tph_c12780 2ffc7868235eab584a370670ab729754 589 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 59 71 3.6E-18 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Tph_c12780 2ffc7868235eab584a370670ab729754 589 SUPERFAMILY SSF53335 26 307 8.02E-58 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c12780 2ffc7868235eab584a370670ab729754 589 Pfam PF01555 DNA methylase 59 302 2.5E-37 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c03200 5308dcb5729b06d0a0112801287a84ce 88 SUPERFAMILY SSF143120 4 44 4.58E-8 T 14-10-2018 IPR036165 YefM-like superfamily Tph_c03200 5308dcb5729b06d0a0112801287a84ce 88 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 40 3.2E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Tph_c03200 5308dcb5729b06d0a0112801287a84ce 88 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 39 1.6E-9 T 14-10-2018 Tph_c12400 42aa7dbd196f51a1b12e890a786aba22 236 SUPERFAMILY SSF109604 22 181 5.32E-22 T 14-10-2018 Tph_c12400 42aa7dbd196f51a1b12e890a786aba22 236 Pfam PF01966 HD domain 51 132 1.1E-4 T 14-10-2018 IPR006674 HD domain Tph_c12400 42aa7dbd196f51a1b12e890a786aba22 236 Gene3D G3DSA:1.10.3210.10 20 176 7.2E-15 T 14-10-2018 Tph_c12400 42aa7dbd196f51a1b12e890a786aba22 236 SMART SM00471 46 161 0.0095 T 14-10-2018 IPR003607 HD/PDEase domain Tph_c24060 023f97db3b4bf5ada6f7c377af9a282a 410 Gene3D G3DSA:1.10.10.2840 265 395 3.3E-19 T 14-10-2018 Tph_c24060 023f97db3b4bf5ada6f7c377af9a282a 410 Pfam PF13556 PucR C-terminal helix-turn-helix domain 333 391 5.3E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tph_c17640 69da1985685fd7f70560caab36c5bd2b 480 Pfam PF06782 Uncharacterised protein family (UPF0236) 25 437 4.1E-51 T 14-10-2018 IPR009620 Uncharacterised protein family UPF0236 Tph_c20010 69da1985685fd7f70560caab36c5bd2b 480 Pfam PF06782 Uncharacterised protein family (UPF0236) 25 437 4.1E-51 T 14-10-2018 IPR009620 Uncharacterised protein family UPF0236 Tph_c28740 69da1985685fd7f70560caab36c5bd2b 480 Pfam PF06782 Uncharacterised protein family (UPF0236) 25 437 4.1E-51 T 14-10-2018 IPR009620 Uncharacterised protein family UPF0236 Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 18 168 7.7E-52 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 ProSitePatterns PS00761 Signal peptidases I signature 3. 134 147 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 SUPERFAMILY SSF51306 31 173 2.2E-59 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 ProSitePatterns PS00501 Signal peptidases I serine active site. 42 49 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 Pfam PF00717 Peptidase S24-like 39 106 1.2E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 33 49 4.5E-21 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 85 97 4.5E-21 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tph_c10280 b9e7933213b240a4b36d4f99593a57a0 176 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 129 148 4.5E-21 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Tph_c18520 ccfa866cdb5aa060469315375f3da5d7 73 Pfam PF11213 Protein of unknown function (DUF3006) 5 67 1.8E-12 T 14-10-2018 IPR021377 Protein of unknown function DUF3006 Tph_c24680 54a1ae8ca77b91f3b5cae02fc4f44d7a 447 Pfam PF05673 Protein of unknown function (DUF815) 190 438 3.1E-98 T 14-10-2018 IPR008533 Domain of unknown function DUF815 Tph_c24680 54a1ae8ca77b91f3b5cae02fc4f44d7a 447 SMART SM00382 241 408 5.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c24680 54a1ae8ca77b91f3b5cae02fc4f44d7a 447 Gene3D G3DSA:3.40.50.300 212 355 2.2E-13 T 14-10-2018 Tph_c24680 54a1ae8ca77b91f3b5cae02fc4f44d7a 447 SUPERFAMILY SSF52540 155 398 1.41E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c28210 8001fed85067ed6f06e0a5a7f5af5adf 104 SMART SM00363 11 74 3.9E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c28210 8001fed85067ed6f06e0a5a7f5af5adf 104 SUPERFAMILY SSF55174 10 88 3.66E-22 T 14-10-2018 Tph_c28210 8001fed85067ed6f06e0a5a7f5af5adf 104 Pfam PF01479 S4 domain 11 57 1.8E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c28210 8001fed85067ed6f06e0a5a7f5af5adf 104 PIRSF PIRSF038881 11 99 1.5E-23 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type Tph_c28210 8001fed85067ed6f06e0a5a7f5af5adf 104 Gene3D G3DSA:3.10.290.10 5 102 8.0E-28 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Tph_c05220 d11916ba78a278ff0340cf398ff585ef 401 Gene3D G3DSA:3.30.2110.10 30 198 9.2E-52 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Tph_c05220 d11916ba78a278ff0340cf398ff585ef 401 PIRSF PIRSF026782 24 380 7.0E-119 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Tph_c05220 d11916ba78a278ff0340cf398ff585ef 401 SUPERFAMILY SSF111342 20 301 1.31E-85 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Tph_c05220 d11916ba78a278ff0340cf398ff585ef 401 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 28 374 29.645 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Tph_c05220 d11916ba78a278ff0340cf398ff585ef 401 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 35 373 5.7E-94 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Tph_c05220 d11916ba78a278ff0340cf398ff585ef 401 Pfam PF01888 CbiD 28 283 5.9E-91 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 SUPERFAMILY SSF54631 1 133 2.4E-35 T 14-10-2018 Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 SMART SM00116 85 132 1.9E-12 T 14-10-2018 IPR000644 CBS domain Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 SMART SM00116 10 57 1.1E-13 T 14-10-2018 IPR000644 CBS domain Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 SUPERFAMILY SSF55021 143 203 2.17E-7 T 14-10-2018 Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 Gene3D G3DSA:3.10.580.10 1 139 2.2E-37 T 14-10-2018 Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 Gene3D G3DSA:3.30.70.260 141 209 3.2E-5 T 14-10-2018 Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 Pfam PF00571 CBS domain 3 52 1.3E-15 T 14-10-2018 IPR000644 CBS domain Tph_c00500 927d987aba75fb763f047139cea2c2ef 216 Pfam PF00571 CBS domain 85 131 5.8E-14 T 14-10-2018 IPR000644 CBS domain Tph_c06220 0a9b229fd546a6a6f8a6ca01097def94 138 Pfam PF01850 PIN domain 5 123 2.6E-16 T 14-10-2018 IPR002716 PIN domain Tph_c06220 0a9b229fd546a6a6f8a6ca01097def94 138 Gene3D G3DSA:3.40.50.1010 5 129 1.0E-21 T 14-10-2018 Tph_c06220 0a9b229fd546a6a6f8a6ca01097def94 138 SUPERFAMILY SSF88723 5 126 3.08E-20 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c06220 0a9b229fd546a6a6f8a6ca01097def94 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 133 9.654 T 14-10-2018 IPR022907 VapC family GO:0004540 Tph_c02400 7e38164dc028eed0f49c47f11217086f 75 Pfam PF07872 Protein of unknown function (DUF1659) 7 51 6.0E-18 T 14-10-2018 IPR012454 Protein of unknown function DUF1659 Tph_c26740 4f9c21b109c7b89ac5397438f755d93d 166 Gene3D G3DSA:3.30.70.560 2 163 2.2E-61 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tph_c26740 4f9c21b109c7b89ac5397438f755d93d 166 SUPERFAMILY SSF55083 5 154 1.57E-57 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tph_c26740 4f9c21b109c7b89ac5397438f755d93d 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 7 135 2.7E-39 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tph_c26740 4f9c21b109c7b89ac5397438f755d93d 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 6 135 4.7E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tph_c26740 4f9c21b109c7b89ac5397438f755d93d 166 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Tph_c24550 3a4c31d3579b52361b1fd4f4c0b85d92 744 Gene3D G3DSA:3.30.70.2230 455 602 9.8E-16 T 14-10-2018 Tph_c10480 2d57e438cec7f852d56b7155f54028e7 163 SUPERFAMILY SSF111321 5 148 7.98E-50 T 14-10-2018 IPR036075 AF1104-like superfamily Tph_c10480 2d57e438cec7f852d56b7155f54028e7 163 Pfam PF01937 Protein of unknown function DUF89 4 139 4.8E-30 T 14-10-2018 IPR002791 Domain of unknown function DUF89 Tph_c10480 2d57e438cec7f852d56b7155f54028e7 163 Gene3D G3DSA:3.40.50.10880 2 150 3.5E-54 T 14-10-2018 Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 Pfam PF00395 S-layer homology domain 30 71 8.5E-15 T 14-10-2018 IPR001119 S-layer homology domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 Pfam PF00395 S-layer homology domain 91 133 1.6E-8 T 14-10-2018 IPR001119 S-layer homology domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 Pfam PF00395 S-layer homology domain 156 198 2.0E-9 T 14-10-2018 IPR001119 S-layer homology domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SUPERFAMILY SSF49299 853 979 3.14E-7 T 14-10-2018 IPR035986 PKD domain superfamily Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 Gene3D G3DSA:2.60.40.10 1336 1465 2.8E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SUPERFAMILY SSF49299 1262 1337 1.84E-5 T 14-10-2018 IPR035986 PKD domain superfamily Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 1342 1419 0.1 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 1169 1258 2.2 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 1266 1338 1.6 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 903 980 2.6 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 996 1073 1.3 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 241 333 12.0 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 349 425 0.41 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c07230 338639974f51ae7fa374e5c807d581ad 1527 SMART SM00089 799 887 3.3 T 14-10-2018 IPR022409 PKD/Chitinase domain Tph_c10380 5dbf38ba4b187987d0cee6e9a63888ff 101 Pfam PF16760 Starch/carbohydrate-binding module (family 53) 22 98 1.3E-14 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 Tph_c10380 5dbf38ba4b187987d0cee6e9a63888ff 101 Gene3D G3DSA:2.60.40.10 18 101 8.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c10380 5dbf38ba4b187987d0cee6e9a63888ff 101 SMART SM01066 18 100 7.5E-29 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 Tph_c26340 03950ab3bfe33e4744f008b9d213bc95 183 SUPERFAMILY SSF54862 18 118 8.37E-23 T 14-10-2018 Tph_c26340 03950ab3bfe33e4744f008b9d213bc95 183 Gene3D G3DSA:3.30.70.3270 18 128 1.4E-27 T 14-10-2018 Tph_c26340 03950ab3bfe33e4744f008b9d213bc95 183 Pfam PF12838 4Fe-4S dicluster domain 39 89 1.3E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c26340 03950ab3bfe33e4744f008b9d213bc95 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c19280 c59c54a96a44a7063fff0f3377bbb19f 193 Gene3D G3DSA:3.40.50.300 64 167 6.6E-21 T 14-10-2018 Tph_c19280 c59c54a96a44a7063fff0f3377bbb19f 193 SUPERFAMILY SSF52540 44 137 5.87E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c19280 c59c54a96a44a7063fff0f3377bbb19f 193 Pfam PF01695 IstB-like ATP binding protein 57 167 1.4E-29 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c15790 b8ad3b132ddc4a1a7ea8371f9c3ebe0b 186 PIRSF PIRSF015617 1 186 1.3E-53 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c15790 b8ad3b132ddc4a1a7ea8371f9c3ebe0b 186 SUPERFAMILY SSF52540 1 186 5.32E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15790 b8ad3b132ddc4a1a7ea8371f9c3ebe0b 186 Gene3D G3DSA:3.40.50.300 1 186 6.7E-59 T 14-10-2018 Tph_c15790 b8ad3b132ddc4a1a7ea8371f9c3ebe0b 186 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 1 186 4.9E-56 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Tph_c06940 0bf8a7c7353b66eb4e02b3b0b495a7fc 463 Gene3D G3DSA:1.10.220.70 57 143 1.3E-33 T 14-10-2018 Tph_c06940 0bf8a7c7353b66eb4e02b3b0b495a7fc 463 Gene3D G3DSA:3.20.20.70 144 456 1.7E-149 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c06940 0bf8a7c7353b66eb4e02b3b0b495a7fc 463 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 14 444 4.8E-212 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Tph_c06940 0bf8a7c7353b66eb4e02b3b0b495a7fc 463 PIRSF PIRSF018788 3 459 3.5E-225 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 Tph_c06940 0bf8a7c7353b66eb4e02b3b0b495a7fc 463 Gene3D G3DSA:2.30.170.30 4 56 6.2E-20 T 14-10-2018 Tph_c11960 1d73863b83e0bdf88813e1c915c2a6de 74 Pfam PF07872 Protein of unknown function (DUF1659) 7 51 4.6E-19 T 14-10-2018 IPR012454 Protein of unknown function DUF1659 Tph_c06260 ce9dbbd50df7656f3991181543857e2f 414 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 4.2E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c06260 ce9dbbd50df7656f3991181543857e2f 414 Pfam PF01548 Transposase 5 165 2.5E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 351 1.3E-133 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 SMART SM01329 3 351 8.9E-202 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 349 7.2E-155 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 Gene3D G3DSA:3.40.718.10 2 357 2.8E-146 T 14-10-2018 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 SUPERFAMILY SSF53659 3 355 5.38E-122 T 14-10-2018 Tph_c19810 7c9e03f3bf9bf2526406587f75b6ae0b 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 355 50.519 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 Tph_c18690 de30e7759d4e2bb4331a1f17a231da69 611 Pfam PF03553 Na+/H+ antiporter family 219 558 3.7E-59 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tph_c20540 96fc2519112be681d8942bb04a8f93b4 277 ProSitePatterns PS00770 Aminotransferases class-IV signature. 179 208 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Tph_c20540 96fc2519112be681d8942bb04a8f93b4 277 Pfam PF01063 Amino-transferase class IV 31 252 5.6E-52 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Tph_c20540 96fc2519112be681d8942bb04a8f93b4 277 Gene3D G3DSA:3.20.10.10 119 276 2.6E-50 T 14-10-2018 Tph_c20540 96fc2519112be681d8942bb04a8f93b4 277 SUPERFAMILY SSF56752 2 275 3.01E-78 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Tph_c20540 96fc2519112be681d8942bb04a8f93b4 277 Gene3D G3DSA:3.30.470.10 4 115 2.6E-30 T 14-10-2018 Tph_c19190 1d7bdbe49357847180d1f36a3c31ef56 390 Pfam PF03773 Predicted permease 32 387 1.4E-77 T 14-10-2018 IPR005524 Predicted permease DUF318 Tph_c22100 04991374d4aef5dadd7116bb6eb7a49f 278 SMART SM00079 47 266 2.9E-7 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 Tph_c22100 04991374d4aef5dadd7116bb6eb7a49f 278 SUPERFAMILY SSF53850 8 266 6.65E-74 T 14-10-2018 Tph_c22100 04991374d4aef5dadd7116bb6eb7a49f 278 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 265 1.9E-70 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tph_c22100 04991374d4aef5dadd7116bb6eb7a49f 278 SMART SM00062 47 267 6.6E-80 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF Tph_c22100 04991374d4aef5dadd7116bb6eb7a49f 278 Gene3D G3DSA:3.40.190.10 133 226 4.8E-72 T 14-10-2018 Tph_c22100 04991374d4aef5dadd7116bb6eb7a49f 278 Gene3D G3DSA:3.40.190.10 50 263 4.8E-72 T 14-10-2018 Tph_c20230 c7277c4ec7176c72a3d534f0bbbd1684 111 Pfam PF14330 Domain of unknown function (DUF4387) 4 100 2.9E-40 T 14-10-2018 IPR025496 Protein of unknown function DUF4387 Tph_c20390 0f8631b87aa44f216c557080c07e63ee 214 SUPERFAMILY SSF161098 15 198 3.14E-31 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c20390 0f8631b87aa44f216c557080c07e63ee 214 Gene3D G3DSA:1.10.3720.10 11 206 1.8E-25 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c20390 0f8631b87aa44f216c557080c07e63ee 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 203 1.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 Hamap MF_00367 GTPase Era [era]. 1 278 33.735 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 146 4.7E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 Gene3D G3DSA:3.40.50.300 1 167 9.6E-46 T 14-10-2018 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 SUPERFAMILY SSF54814 164 279 5.23E-44 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 Gene3D G3DSA:3.30.300.20 168 279 2.6E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 TIGRFAM TIGR00436 era: GTP-binding protein Era 1 261 7.4E-94 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 Pfam PF07650 KH domain 190 267 6.0E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 Pfam PF01926 50S ribosome-binding GTPase 1 107 6.6E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Tph_c22690 644c5f8af8d82fba46eb7b4067c36d49 279 SUPERFAMILY SSF52540 1 187 1.17E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c02050 aa98fd6160e8b021487b53e9b28c4c0e 91 Gene3D G3DSA:2.10.260.10 1 50 6.6E-6 T 14-10-2018 Tph_c02050 aa98fd6160e8b021487b53e9b28c4c0e 91 SUPERFAMILY SSF89447 6 40 2.79E-6 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c25620 9cadcbab8e86a1fabd86ca5318a5baa5 74 SMART SM00316 6 74 1.9E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 Tph_c25620 9cadcbab8e86a1fabd86ca5318a5baa5 74 Pfam PF01176 Translation initiation factor 1A / IF-1 9 72 1.3E-29 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Tph_c25620 9cadcbab8e86a1fabd86ca5318a5baa5 74 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 5 73 2.4E-36 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tph_c25620 9cadcbab8e86a1fabd86ca5318a5baa5 74 SUPERFAMILY SSF50249 4 73 2.45E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c25620 9cadcbab8e86a1fabd86ca5318a5baa5 74 Gene3D G3DSA:2.40.50.140 1 74 2.7E-37 T 14-10-2018 Tph_c25620 9cadcbab8e86a1fabd86ca5318a5baa5 74 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 3 74 26.761 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Tph_c10860 8310a8dd49fb2c0976a595fb88932bd3 146 Pfam PF02050 Flagellar FliJ protein 22 143 4.8E-9 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 Tph_c12050 979b64a0450d546d15eb3e170078cc73 894 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 506 512 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tph_c12050 979b64a0450d546d15eb3e170078cc73 894 Pfam PF06634 Protein of unknown function (DUF1156) 10 64 3.1E-23 T 14-10-2018 IPR009537 Domain of unknown function DUF1156 Tph_c12050 979b64a0450d546d15eb3e170078cc73 894 SUPERFAMILY SSF53335 79 622 1.95E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c12050 979b64a0450d546d15eb3e170078cc73 894 Gene3D G3DSA:3.40.50.150 67 157 2.9E-6 T 14-10-2018 Tph_c09990 6e6f9609261cadaa7a3a49d6bdbed623 87 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 68 3.0E-24 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Tph_c09990 6e6f9609261cadaa7a3a49d6bdbed623 87 Gene3D G3DSA:1.10.8.910 8 76 1.3E-20 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily Tph_c23860 ddce138f73f3627ffc3028a87658385c 255 SUPERFAMILY SSF52518 22 246 2.53E-58 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c23860 ddce138f73f3627ffc3028a87658385c 255 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 58 214 1.7E-22 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Tph_c23860 ddce138f73f3627ffc3028a87658385c 255 Gene3D G3DSA:3.40.50.970 73 253 7.3E-24 T 14-10-2018 Tph_c28870 daf0ab0f935c6137597e4136a7961d2a 87 Gene3D G3DSA:3.30.70.20 20 86 2.7E-10 T 14-10-2018 Tph_c28870 daf0ab0f935c6137597e4136a7961d2a 87 SUPERFAMILY SSF54862 13 87 2.3E-13 T 14-10-2018 Tph_c28870 daf0ab0f935c6137597e4136a7961d2a 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c28870 daf0ab0f935c6137597e4136a7961d2a 87 Pfam PF12838 4Fe-4S dicluster domain 25 72 1.0E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c28870 daf0ab0f935c6137597e4136a7961d2a 87 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c23580 5eb726ac5e9ac5a79a9ee8b6a59e3a04 395 Pfam PF02687 FtsX-like permease family 302 388 4.2E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tph_c23580 5eb726ac5e9ac5a79a9ee8b6a59e3a04 395 Pfam PF12704 MacB-like periplasmic core domain 21 237 3.8E-24 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Tph_c25400 4400fb32063bf6c0a9f50af6e6cb7b78 380 Pfam PF00149 Calcineurin-like phosphoesterase 1 186 8.4E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Tph_c25400 4400fb32063bf6c0a9f50af6e6cb7b78 380 SUPERFAMILY SSF56300 1 232 6.99E-34 T 14-10-2018 Tph_c25400 4400fb32063bf6c0a9f50af6e6cb7b78 380 Gene3D G3DSA:3.60.21.10 1 233 1.8E-28 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c27170 1e276bce2425a7047f15dd56c61bc7a4 331 Pfam PF08486 Stage II sporulation protein 57 158 7.4E-28 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Tph_c27170 1e276bce2425a7047f15dd56c61bc7a4 331 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 53 325 4.2E-98 T 14-10-2018 IPR014225 Sporulation stage II, protein D firmicutes Tph_c27170 1e276bce2425a7047f15dd56c61bc7a4 331 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 57 325 2.3E-71 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Tph_c27470 30f92a59d40d540a802c06072c0888c3 107 Gene3D G3DSA:1.10.287.1080 9 105 3.5E-9 T 14-10-2018 Tph_c27470 30f92a59d40d540a802c06072c0888c3 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 20 101 4.5E-6 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Tph_c27470 30f92a59d40d540a802c06072c0888c3 107 SUPERFAMILY SSF101386 19 101 3.4E-7 T 14-10-2018 Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 SMART SM00849 19 214 1.9E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 363 391 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 Gene3D G3DSA:3.10.20.580 448 554 2.5E-38 T 14-10-2018 Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 Pfam PF00753 Metallo-beta-lactamase superfamily 18 97 9.2E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 354 407 3.6E-11 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 Hamap MF_01491 Ribonuclease J [rnj]. 2 554 48.06 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 PIRSF PIRSF004803 1 554 1.6E-250 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 Gene3D G3DSA:3.40.50.10710 206 364 1.7E-189 T 14-10-2018 Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 7 551 5.2E-204 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 Gene3D G3DSA:3.60.15.10 8 435 1.7E-189 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c11470 e5769daa274bdaf73efd283072086fa6 554 SUPERFAMILY SSF56281 7 423 1.18E-99 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c27200 cb28a5377d36ed090052a1f0edea2537 53 SUPERFAMILY SSF52540 9 44 1.15E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c27200 cb28a5377d36ed090052a1f0edea2537 53 Gene3D G3DSA:3.40.50.300 2 45 1.3E-9 T 14-10-2018 Tph_c15660 3ddf2703269c14b79807b8136a570f0a 241 Pfam PF07758 Protein of unknown function (DUF1614) 62 191 9.0E-13 T 14-10-2018 IPR011672 Protein of unknown function DUF1614 Tph_c18800 54e7d09c3767debe7a0518746cc00bef 332 Gene3D G3DSA:3.40.50.11900 235 330 2.6E-7 T 14-10-2018 Tph_c18800 54e7d09c3767debe7a0518746cc00bef 332 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 4 230 1.5E-53 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Tph_c25940 a13764edde502015d24f59c6274e67da 181 SUPERFAMILY SSF53098 35 140 7.21E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c04930 ead7212af5f982824374ca165847fb65 507 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 507 39.407 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 SUPERFAMILY SSF52374 5 314 4.29E-98 T 14-10-2018 Tph_c04930 ead7212af5f982824374ca165847fb65 507 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 505 9.8E-163 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 6.2E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 Pfam PF09190 DALR domain 359 420 1.1E-12 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 SUPERFAMILY SSF47323 351 506 1.44E-27 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c04930 ead7212af5f982824374ca165847fb65 507 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 21 313 1.1E-129 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 Gene3D G3DSA:3.40.50.620 1 305 7.7E-136 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c04930 ead7212af5f982824374ca165847fb65 507 SMART SM00840 359 428 1.1E-14 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Tph_c04930 ead7212af5f982824374ca165847fb65 507 Gene3D G3DSA:1.20.120.640 306 506 1.4E-30 T 14-10-2018 Tph_c24430 66f7c8eed5cc9707f0c3bba507a16b87 305 Pfam PF05107 CRISPR-associated protein Cas7 6 243 4.2E-55 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Tph_c24430 66f7c8eed5cc9707f0c3bba507a16b87 305 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 5 286 4.5E-62 T 14-10-2018 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C Tph_c24430 66f7c8eed5cc9707f0c3bba507a16b87 305 TIGRFAM TIGR02590 cas_Csh2: CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI 7 287 1.8E-75 T 14-10-2018 IPR013419 CRISPR-associated protein Csh2 Tph_c00860 0424f4125900fc279badd126e41f7532 465 Gene3D G3DSA:3.50.50.60 2 122 3.7E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c00860 0424f4125900fc279badd126e41f7532 465 Gene3D G3DSA:3.50.50.60 128 230 9.2E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c00860 0424f4125900fc279badd126e41f7532 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 415 437 5.6E-6 T 14-10-2018 Tph_c00860 0424f4125900fc279badd126e41f7532 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.6E-6 T 14-10-2018 Tph_c00860 0424f4125900fc279badd126e41f7532 465 Pfam PF01266 FAD dependent oxidoreductase 5 279 7.6E-10 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Tph_c00860 0424f4125900fc279badd126e41f7532 465 PIRSF PIRSF038984 127 464 3.0E-24 T 14-10-2018 IPR028348 FAD dependent protein Tph_c00860 0424f4125900fc279badd126e41f7532 465 PIRSF PIRSF038984 2 122 5.6E-13 T 14-10-2018 IPR028348 FAD dependent protein Tph_c00860 0424f4125900fc279badd126e41f7532 465 SUPERFAMILY SSF51905 3 462 4.24E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c17140 203e1f234f4071ee0c28b5c70cc0f4a2 304 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 5 296 2.3E-93 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 Tph_c17140 203e1f234f4071ee0c28b5c70cc0f4a2 304 Pfam PF03313 Serine dehydratase alpha chain 17 277 2.4E-72 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit Tph_c11840 c1f340d544dc10226c15874fa8f135ff 135 Pfam PF06713 Bacterial PH domain 52 127 1.1E-23 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 Tph_c07970 62d6d54c99560790cf25c19f2af82c0d 97 Pfam PF01909 Nucleotidyltransferase domain 22 96 2.6E-14 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c07970 62d6d54c99560790cf25c19f2af82c0d 97 Gene3D G3DSA:3.30.460.10 2 96 3.8E-24 T 14-10-2018 Tph_c07970 62d6d54c99560790cf25c19f2af82c0d 97 SUPERFAMILY SSF81301 4 97 9.58E-23 T 14-10-2018 Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 SUPERFAMILY SSF102114 19 328 2.75E-72 T 14-10-2018 Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 PIRSF PIRSF037420 15 356 1.1E-81 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 Gene3D G3DSA:3.20.20.70 20 309 3.5E-62 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 Pfam PF13353 4Fe-4S single cluster domain 23 132 7.8E-9 T 14-10-2018 Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 257 343 9.7E-11 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 SMART SM00729 21 218 4.3E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 Pfam PF13186 Iron-sulfur cluster-binding domain 257 318 2.2E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain Tph_c25080 7c121dc3334f5f90070f03cdc413e6c1 357 Pfam PF04055 Radical SAM superfamily 26 179 2.1E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 Gene3D G3DSA:3.30.450.20 57 296 4.8E-48 T 14-10-2018 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 SUPERFAMILY SSF58104 361 687 4.45E-70 T 14-10-2018 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 641 2.8E-44 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 Pfam PF00672 HAMP domain 326 380 1.3E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 SMART SM00283 413 688 1.6E-73 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 Gene3D G3DSA:1.10.287.950 326 652 4.7E-67 T 14-10-2018 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 SUPERFAMILY SSF103190 104 209 3.14E-9 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 Gene3D G3DSA:3.30.450.20 64 199 4.8E-48 T 14-10-2018 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 SMART SM00304 326 384 6.2E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 SMART SM00304 622 685 39.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Tph_c02100 c7c09e44a5935ef1a71671112010d1a9 689 Pfam PF02743 Cache domain 39 286 7.5E-29 T 14-10-2018 IPR033479 Double Cache domain 1 Tph_c26260 c8fade74acf23871b421c50658a8467d 586 Gene3D G3DSA:3.40.228.10 1 185 1.8E-150 T 14-10-2018 Tph_c26260 c8fade74acf23871b421c50658a8467d 586 Pfam PF00384 Molybdopterin oxidoreductase 10 331 2.1E-69 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26260 c8fade74acf23871b421c50658a8467d 586 SUPERFAMILY SSF53706 2 456 4.97E-148 T 14-10-2018 Tph_c26260 c8fade74acf23871b421c50658a8467d 586 Gene3D G3DSA:2.40.40.20 428 550 3.2E-46 T 14-10-2018 Tph_c26260 c8fade74acf23871b421c50658a8467d 586 SUPERFAMILY SSF50692 392 550 3.62E-48 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Tph_c26260 c8fade74acf23871b421c50658a8467d 586 Gene3D G3DSA:3.40.50.740 186 376 1.8E-150 T 14-10-2018 Tph_c26260 c8fade74acf23871b421c50658a8467d 586 Pfam PF01568 Molydopterin dinucleotide binding domain 438 544 2.4E-33 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Tph_c04550 173a032b75dfefa510b2f53fb520044d 488 Pfam PF07670 Nucleoside recognition 357 456 1.3E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c04550 173a032b75dfefa510b2f53fb520044d 488 Pfam PF07670 Nucleoside recognition 201 292 5.4E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c04550 173a032b75dfefa510b2f53fb520044d 488 Pfam PF07664 Ferrous iron transport protein B C terminus 301 350 1.7E-11 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Tph_c16730 0e0f097d0a86dae51f07872a80a1b753 164 Gene3D G3DSA:3.40.50.1000 17 149 7.2E-24 T 14-10-2018 IPR023214 HAD superfamily Tph_c16730 0e0f097d0a86dae51f07872a80a1b753 164 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 2 158 8.7E-43 T 14-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like Tph_c16730 0e0f097d0a86dae51f07872a80a1b753 164 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 137 4.9E-17 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 Tph_c16730 0e0f097d0a86dae51f07872a80a1b753 164 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 57 129 8.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Tph_c16730 0e0f097d0a86dae51f07872a80a1b753 164 Pfam PF13242 HAD-hyrolase-like 90 136 4.5E-10 T 14-10-2018 Tph_c16730 0e0f097d0a86dae51f07872a80a1b753 164 SUPERFAMILY SSF56784 8 137 9.86E-26 T 14-10-2018 IPR036412 HAD-like superfamily Tph_c28680 61382aa5cf20ab4b058a6c327a5c4f20 156 Pfam PF04308 Ribonuclease H-like 15 156 6.5E-58 T 14-10-2018 IPR007405 Bacteriophage KVP40, Orf299 Tph_c12100 39c1d6810d5ed20e8c7e2671bf2d5043 351 SUPERFAMILY SSF101478 5 334 2.88E-59 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Tph_c12100 39c1d6810d5ed20e8c7e2671bf2d5043 351 Gene3D G3DSA:1.10.4080.10 7 343 1.1E-76 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily Tph_c12100 39c1d6810d5ed20e8c7e2671bf2d5043 351 Pfam PF03747 ADP-ribosylglycohydrolase 11 315 2.6E-73 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 Tph_c07960 2c686665fe6a0e0d383439451c6f692a 198 Pfam PF00665 Integrase core domain 52 126 1.0E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c12570 67ed6f5b18ae4bf53f008f9ce85073f1 162 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 44 110 4.8E-12 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Tph_c12570 67ed6f5b18ae4bf53f008f9ce85073f1 162 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 113 13.085 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 Tph_c12570 67ed6f5b18ae4bf53f008f9ce85073f1 162 Pfam PF04977 Septum formation initiator 45 112 7.2E-13 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC Tph_c16440 e7082f8543de636c8e394f818a6c3c97 65 Pfam PF06686 Stage III sporulation protein AC/AD protein family 6 60 4.8E-19 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family Tph_c16440 e7082f8543de636c8e394f818a6c3c97 65 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 1 64 1.3E-27 T 14-10-2018 IPR009570 Stage III sporulation protein AC Tph_c23970 61c7f4f46c2cfcd5c7702523bdcaa42c 406 Pfam PF04412 Protein of unknown function (DUF521) 1 395 4.2E-153 T 14-10-2018 IPR007506 Aconitase X catalytic domain, putative Tph_c11190 39c4b8cb1fc9706c4865279b26f6600f 56 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 38 49 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c11190 39c4b8cb1fc9706c4865279b26f6600f 56 SUPERFAMILY SSF54862 3 54 1.49E-18 T 14-10-2018 Tph_c11190 39c4b8cb1fc9706c4865279b26f6600f 56 Gene3D G3DSA:3.30.70.20 2 56 2.3E-19 T 14-10-2018 Tph_c11190 39c4b8cb1fc9706c4865279b26f6600f 56 Pfam PF13187 4Fe-4S dicluster domain 8 53 1.3E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c00520 13b777f20c2f942aea6fdc17a822e668 559 Gene3D G3DSA:3.90.700.10 342 489 1.3E-109 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c00520 13b777f20c2f942aea6fdc17a822e668 559 Gene3D G3DSA:3.50.50.60 74 552 1.3E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c00520 13b777f20c2f942aea6fdc17a822e668 559 Pfam PF00890 FAD binding domain 75 526 3.6E-53 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c00520 13b777f20c2f942aea6fdc17a822e668 559 SUPERFAMILY SSF56425 351 498 7.74E-33 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c00520 13b777f20c2f942aea6fdc17a822e668 559 SUPERFAMILY SSF51905 58 557 1.9E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c05630 25a4fc9ca89b735c706473c27cfad02c 503 Pfam PF04055 Radical SAM superfamily 197 361 1.4E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c05630 25a4fc9ca89b735c706473c27cfad02c 503 SUPERFAMILY SSF102114 167 396 7.98E-36 T 14-10-2018 Tph_c05630 25a4fc9ca89b735c706473c27cfad02c 503 Pfam PF02310 B12 binding domain 33 139 4.5E-7 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c05630 25a4fc9ca89b735c706473c27cfad02c 503 SMART SM00729 190 412 1.8E-24 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c05630 25a4fc9ca89b735c706473c27cfad02c 503 Gene3D G3DSA:3.80.30.20 190 392 4.0E-21 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c15650 a22e0c9c88a3d478b6aa5ce0eca86e65 385 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 122 305 4.3E-52 T 14-10-2018 IPR010897 Sporulation stage II, protein P Tph_c15650 a22e0c9c88a3d478b6aa5ce0eca86e65 385 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 100 301 9.5E-53 T 14-10-2018 IPR010897 Sporulation stage II, protein P Tph_c22290 63b155f888044c819332a6308ff3f717 451 Pfam PF14620 YpeB sporulation 18 375 7.2E-116 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 Tph_c22290 63b155f888044c819332a6308ff3f717 451 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 6 441 1.4E-128 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 Tph_c21630 faa7dea82f0fc4987009c63b3276e055 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Tph_c21630 faa7dea82f0fc4987009c63b3276e055 491 SUPERFAMILY SSF53720 5 482 1.96E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Tph_c21630 faa7dea82f0fc4987009c63b3276e055 491 Gene3D G3DSA:3.40.309.10 256 449 4.6E-181 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Tph_c21630 faa7dea82f0fc4987009c63b3276e055 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Tph_c21630 faa7dea82f0fc4987009c63b3276e055 491 Gene3D G3DSA:3.40.605.10 13 477 4.6E-181 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Tph_c21630 faa7dea82f0fc4987009c63b3276e055 491 Pfam PF00171 Aldehyde dehydrogenase family 17 479 7.3E-177 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Tph_c17840 2ef752defff0163bcdbc7ff2901a630a 223 Pfam PF02581 Thiamine monophosphate synthase 15 197 7.7E-61 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17840 2ef752defff0163bcdbc7ff2901a630a 223 SUPERFAMILY SSF51391 13 215 6.67E-64 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17840 2ef752defff0163bcdbc7ff2901a630a 223 Gene3D G3DSA:3.20.20.70 10 220 7.1E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c17840 2ef752defff0163bcdbc7ff2901a630a 223 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 215 27.326 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17840 2ef752defff0163bcdbc7ff2901a630a 223 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 15 209 2.4E-64 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c26420 1108c31d176e91f9f0581a1d93e1d27d 227 Pfam PF00005 ABC transporter 26 159 2.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c26420 1108c31d176e91f9f0581a1d93e1d27d 227 Gene3D G3DSA:3.40.50.300 4 221 6.4E-58 T 14-10-2018 Tph_c26420 1108c31d176e91f9f0581a1d93e1d27d 227 SUPERFAMILY SSF52540 9 218 1.19E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c26420 1108c31d176e91f9f0581a1d93e1d27d 227 SMART SM00382 25 209 8.8E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c27920 96291ea3d363ce17806550679c888768 334 SMART SM00989 258 325 9.6E-4 T 14-10-2018 IPR004096 4-vinyl reductase, 4VR Tph_c27920 96291ea3d363ce17806550679c888768 334 SUPERFAMILY SSF111126 188 322 5.13E-14 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily Tph_c27920 96291ea3d363ce17806550679c888768 334 Gene3D G3DSA:3.30.1380.20 160 329 4.8E-12 T 14-10-2018 Tph_c01290 032e330af60e8745941be53b0ae0b76b 180 Pfam PF13247 4Fe-4S dicluster domain 51 145 7.7E-30 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c01290 032e330af60e8745941be53b0ae0b76b 180 Gene3D G3DSA:3.30.70.20 64 116 6.2E-70 T 14-10-2018 Tph_c01290 032e330af60e8745941be53b0ae0b76b 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 90 101 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c01290 032e330af60e8745941be53b0ae0b76b 180 Gene3D G3DSA:3.30.70.20 3 178 6.2E-70 T 14-10-2018 Tph_c01290 032e330af60e8745941be53b0ae0b76b 180 SUPERFAMILY SSF54862 1 178 2.83E-73 T 14-10-2018 Tph_c29100 93f27d945ef6336f2a103855e6b1efee 1190 SUPERFAMILY SSF75005 870 1171 5.45E-68 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Tph_c29100 93f27d945ef6336f2a103855e6b1efee 1190 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 874 1174 1.1E-49 T 14-10-2018 IPR007184 Mannoside phosphorylase Tph_c29100 93f27d945ef6336f2a103855e6b1efee 1190 SUPERFAMILY SSF53448 30 358 9.0E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c29100 93f27d945ef6336f2a103855e6b1efee 1190 Gene3D G3DSA:3.90.550.10 12 283 9.4E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c29100 93f27d945ef6336f2a103855e6b1efee 1190 Gene3D G3DSA:2.115.10.20 857 1188 2.6E-105 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 Gene3D G3DSA:3.30.230.70 9 237 5.9E-63 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.678 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 SUPERFAMILY SSF54211 1 181 1.27E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.2E-111 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.5E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 Pfam PF03725 3' exoribonuclease family, domain 2 158 223 1.0E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 SUPERFAMILY SSF55666 153 236 1.17E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Tph_c04140 75139c733a28fb2dec667b1b7e663b09 241 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site Tph_c28040 b14ada3da02430febba5c4dfae7ba06c 157 Pfam PF02590 Predicted SPOUT methyltransferase 2 156 1.0E-51 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tph_c28040 b14ada3da02430febba5c4dfae7ba06c 157 SUPERFAMILY SSF75217 2 155 1.57E-48 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Tph_c28040 b14ada3da02430febba5c4dfae7ba06c 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 2 157 29.956 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tph_c28040 b14ada3da02430febba5c4dfae7ba06c 157 PIRSF PIRSF004505 2 157 3.8E-49 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 Tph_c28040 b14ada3da02430febba5c4dfae7ba06c 157 Gene3D G3DSA:3.40.1280.10 1 157 5.1E-55 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Tph_c13230 f0449846275c5953097ca0e3fd3f468c 194 SUPERFAMILY SSF52218 1 191 9.32E-53 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c13230 f0449846275c5953097ca0e3fd3f468c 194 Pfam PF02525 Flavodoxin-like fold 1 184 1.4E-42 T 14-10-2018 IPR003680 Flavodoxin-like fold Tph_c13230 f0449846275c5953097ca0e3fd3f468c 194 Gene3D G3DSA:3.40.50.360 1 192 1.1E-55 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c29000 b2551268d5879bc911c1f7a6e0064575 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 104 2.5E-25 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tph_c29000 b2551268d5879bc911c1f7a6e0064575 105 Pfam PF02575 YbaB/EbfC DNA-binding family 10 99 1.9E-32 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tph_c29000 b2551268d5879bc911c1f7a6e0064575 105 PIRSF PIRSF004555 2 105 8.5E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tph_c29000 b2551268d5879bc911c1f7a6e0064575 105 SUPERFAMILY SSF82607 10 104 4.05E-28 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tph_c29000 b2551268d5879bc911c1f7a6e0064575 105 Gene3D G3DSA:3.30.1310.10 1 105 9.3E-37 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily Tph_c29000 b2551268d5879bc911c1f7a6e0064575 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 98 20.377 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family Tph_c01170 879426b72a976b897ca0e567687f6e55 553 Pfam PF00890 FAD binding domain 74 524 1.0E-60 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c01170 879426b72a976b897ca0e567687f6e55 553 SUPERFAMILY SSF56425 334 481 1.91E-24 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c01170 879426b72a976b897ca0e567687f6e55 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 74 96 3.8E-6 T 14-10-2018 Tph_c01170 879426b72a976b897ca0e567687f6e55 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 509 524 3.8E-6 T 14-10-2018 Tph_c01170 879426b72a976b897ca0e567687f6e55 553 Gene3D G3DSA:3.90.700.10 327 484 4.8E-107 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Tph_c01170 879426b72a976b897ca0e567687f6e55 553 Gene3D G3DSA:3.50.50.60 72 547 4.8E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c01170 879426b72a976b897ca0e567687f6e55 553 SUPERFAMILY SSF51905 59 552 6.76E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c23920 2b1e726a2e315facf3e8c20c40268d0f 347 Gene3D G3DSA:3.40.190.170 47 344 1.1E-81 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily Tph_c23920 2b1e726a2e315facf3e8c20c40268d0f 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 52 328 1.2E-67 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 Tph_c23920 2b1e726a2e315facf3e8c20c40268d0f 347 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 53 301 8.6E-53 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tph_c23920 2b1e726a2e315facf3e8c20c40268d0f 347 PIRSF PIRSF006470 12 341 2.0E-75 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 Tph_c16930 50dd0de426198614b17bf23f74889e24 104 Pfam PF06135 Bacterial protein of unknown function (DUF965) 24 101 3.0E-37 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 Tph_c16930 50dd0de426198614b17bf23f74889e24 104 PIRSF PIRSF037258 20 104 8.5E-39 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 Tph_c16930 50dd0de426198614b17bf23f74889e24 104 Hamap MF_01507 UPF0297 protein . 20 103 26.455 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 Gene3D G3DSA:1.10.1240.10 1 79 5.8E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 SUPERFAMILY SSF52242 69 210 1.57E-46 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 Pfam PF02607 B12 binding domain 5 75 1.8E-20 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 SMART SM01018 1 84 2.2E-33 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 Gene3D G3DSA:3.40.50.280 80 211 4.3E-50 T 14-10-2018 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 Pfam PF02310 B12 binding domain 91 198 5.4E-28 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c06820 fd6682ffb87d76b9816b7feba55dad34 212 SUPERFAMILY SSF47644 2 83 3.27E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c14920 0753e83e85f8fae4060627af355ec21c 262 Gene3D G3DSA:3.40.1210.10 1 258 1.2E-88 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tph_c14920 0753e83e85f8fae4060627af355ec21c 262 Pfam PF01975 Survival protein SurE 6 188 1.0E-58 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tph_c14920 0753e83e85f8fae4060627af355ec21c 262 SUPERFAMILY SSF64167 4 255 4.45E-80 T 14-10-2018 Tph_c14920 0753e83e85f8fae4060627af355ec21c 262 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 4 259 38.134 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tph_c14920 0753e83e85f8fae4060627af355ec21c 262 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 5 242 3.1E-71 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 Tph_c12760 9a5e9caff74dc4f63fab87a930aab3f6 153 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 8.9E-64 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Tph_c12760 9a5e9caff74dc4f63fab87a930aab3f6 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 81.606 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Tph_c12760 9a5e9caff74dc4f63fab87a930aab3f6 153 Pfam PF03477 ATP cone domain 51 136 1.7E-21 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Tph_c16450 bde03ff0b75ca9d8e7152c8fe1389e1a 190 PIRSF PIRSF021435 19 190 1.1E-43 T 14-10-2018 IPR014198 Stage III sporulation protein AB Tph_c16450 bde03ff0b75ca9d8e7152c8fe1389e1a 190 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 22 190 4.5E-48 T 14-10-2018 IPR014198 Stage III sporulation protein AB Tph_c16450 bde03ff0b75ca9d8e7152c8fe1389e1a 190 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 22 190 1.3E-48 T 14-10-2018 IPR014198 Stage III sporulation protein AB Tph_c05710 48d96730fa45fdb67ea52654c2c6ba4f 94 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 58 5.6E-23 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tph_c05710 48d96730fa45fdb67ea52654c2c6ba4f 94 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 69 16.759 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tph_c05710 48d96730fa45fdb67ea52654c2c6ba4f 94 Gene3D G3DSA:3.30.70.1680 1 58 9.9E-26 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Tph_c05710 48d96730fa45fdb67ea52654c2c6ba4f 94 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 8.0E-12 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tph_c05710 48d96730fa45fdb67ea52654c2c6ba4f 94 SUPERFAMILY SSF117130 1 55 4.58E-18 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Tph_c05710 48d96730fa45fdb67ea52654c2c6ba4f 94 Pfam PF02599 Global regulator protein family 1 52 7.9E-24 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Tph_c23220 680882029759f20abeed7c57494decb4 76 Pfam PF14192 Domain of unknown function (DUF4314) 9 76 1.3E-31 T 14-10-2018 IPR025463 Domain of unknown function DUF4314 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.7E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 Gene3D G3DSA:2.40.50.530 1 64 6.3E-24 T 14-10-2018 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 SUPERFAMILY SSF143034 2 64 4.97E-24 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.346 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.0E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Tph_c13320 e7d592698874579ac3dddaa4a17871f9 65 Pfam PF01632 Ribosomal protein L35 2 62 1.0E-26 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c27100 4c5493de3fa6a7bff623eaca9536b413 97 Pfam PF10135 Rod binding protein 46 93 3.7E-11 T 14-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal Tph_c09910 0fb98db4970e7b1324b8cf2cab2a5ca5 367 SUPERFAMILY SSF51905 5 291 4.43E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c09910 0fb98db4970e7b1324b8cf2cab2a5ca5 367 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 249 264 2.6E-7 T 14-10-2018 Tph_c09910 0fb98db4970e7b1324b8cf2cab2a5ca5 367 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.6E-7 T 14-10-2018 Tph_c09910 0fb98db4970e7b1324b8cf2cab2a5ca5 367 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 43 5.3E-5 T 14-10-2018 Tph_c09910 0fb98db4970e7b1324b8cf2cab2a5ca5 367 Gene3D G3DSA:3.50.50.60 5 331 3.2E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c06870 8352000eee0e70e693c0ae98d696b0bc 89 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 43 88 0.004 T 14-10-2018 Tph_c06870 8352000eee0e70e693c0ae98d696b0bc 89 Pfam PF00936 BMC domain 43 78 1.2E-9 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Tph_c06870 8352000eee0e70e693c0ae98d696b0bc 89 SUPERFAMILY SSF143414 42 79 3.66E-9 T 14-10-2018 IPR037233 CcmK-like superfamily Tph_c06870 8352000eee0e70e693c0ae98d696b0bc 89 Gene3D G3DSA:3.30.70.1710 1 84 3.0E-34 T 14-10-2018 Tph_c01960 376b897e8ecd3903ffdcadf98c4330ef 75 Gene3D G3DSA:3.30.160.250 3 74 2.6E-20 T 14-10-2018 Tph_c01960 376b897e8ecd3903ffdcadf98c4330ef 75 SUPERFAMILY SSF143100 2 60 2.88E-21 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like Tph_c01960 376b897e8ecd3903ffdcadf98c4330ef 75 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 59 7.3E-12 T 14-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 3.9E-18 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.9E-18 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.9E-18 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 146 167 3.9E-18 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 Gene3D G3DSA:1.10.240.10 192 296 1.1E-107 T 14-10-2018 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 328 1.0E-85 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 SUPERFAMILY SSF52374 5 328 2.69E-81 T 14-10-2018 Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 Gene3D G3DSA:3.40.50.620 6 326 1.1E-107 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c15920 3dc41612f455a2abe880099805ab6a09 337 Pfam PF00579 tRNA synthetases class I (W and Y) 5 283 6.5E-64 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c24590 f31dd4aff47b0e3874832134afcfef53 212 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 11 122 7.0E-24 T 14-10-2018 IPR013559 YheO-like Tph_c24590 f31dd4aff47b0e3874832134afcfef53 212 Pfam PF08348 YheO-like PAS domain 7 115 7.0E-43 T 14-10-2018 IPR013559 YheO-like Tph_c24590 f31dd4aff47b0e3874832134afcfef53 212 Pfam PF13309 HTH domain 143 204 4.4E-21 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain Tph_c21140 74da27d5c4263798c20260499f0688bf 380 Pfam PF06969 HemN C-terminal domain 306 370 8.0E-14 T 14-10-2018 IPR010723 HemN, C-terminal Tph_c21140 74da27d5c4263798c20260499f0688bf 380 Gene3D G3DSA:3.80.30.20 1 302 2.6E-106 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Tph_c21140 74da27d5c4263798c20260499f0688bf 380 SUPERFAMILY SSF102114 3 379 3.66E-115 T 14-10-2018 Tph_c21140 74da27d5c4263798c20260499f0688bf 380 SMART SM00729 1 226 1.0E-53 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c21140 74da27d5c4263798c20260499f0688bf 380 Pfam PF04055 Radical SAM superfamily 7 180 5.8E-22 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c21140 74da27d5c4263798c20260499f0688bf 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 3 369 1.1E-93 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.7E-5 T 14-10-2018 Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-5 T 14-10-2018 Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.4E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 335 1.4E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.4E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 SUPERFAMILY SSF51905 4 334 1.55E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 Gene3D G3DSA:3.50.50.60 4 144 3.3E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Tph_c15090 b740ac8062a6fa23ac3d74df20860921 337 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 327 3.0E-20 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Tph_c05990 e4954bc8a5bc827a6154fd112f1e9790 182 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 159 1.7E-24 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Tph_c05990 e4954bc8a5bc827a6154fd112f1e9790 182 Pfam PF04093 rod shape-determining protein MreD 10 161 8.8E-15 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Tph_c05990 e4954bc8a5bc827a6154fd112f1e9790 182 PIRSF PIRSF037497 6 169 5.3E-38 T 14-10-2018 IPR017225 Cell shape-determining protein MreD, predicted Tph_c03390 8bedb917ae4613fded1b3520fbc8557a 346 SUPERFAMILY SSF52540 6 327 6.28E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03390 8bedb917ae4613fded1b3520fbc8557a 346 Gene3D G3DSA:3.40.50.300 5 210 2.1E-63 T 14-10-2018 Tph_c03390 8bedb917ae4613fded1b3520fbc8557a 346 SMART SM00382 31 213 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c03390 8bedb917ae4613fded1b3520fbc8557a 346 Pfam PF01078 Magnesium chelatase, subunit ChlI 121 190 1.3E-6 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain Tph_c03390 8bedb917ae4613fded1b3520fbc8557a 346 Gene3D G3DSA:1.10.8.80 255 342 3.8E-26 T 14-10-2018 Tph_c28120 af780955f01afc16c5890bb7aa465077 51 Pfam PF13165 Six-cysteine peptide SCIFF 5 47 3.5E-22 T 14-10-2018 IPR023975 Six-cysteine peptide SCIFF Tph_c28120 af780955f01afc16c5890bb7aa465077 51 TIGRFAM TIGR03973 six_Cys_in_45: six-cysteine peptide SCIFF 5 46 8.0E-21 T 14-10-2018 IPR023975 Six-cysteine peptide SCIFF Tph_c16900 e40a6f1d011d871cba9c33beb7284fb5 89 Pfam PF06949 Protein of unknown function (DUF1292) 19 85 1.2E-17 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 Tph_c16900 e40a6f1d011d871cba9c33beb7284fb5 89 Hamap MF_01448 UPF0473 protein . 10 87 11.956 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 Tph_c07760 84d5fc610e9071e00d90825945654fd0 451 Gene3D G3DSA:3.90.550.10 88 314 4.2E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c07760 84d5fc610e9071e00d90825945654fd0 451 SUPERFAMILY SSF53448 92 377 3.87E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c07760 84d5fc610e9071e00d90825945654fd0 451 Pfam PF13641 Glycosyltransferase like family 2 101 326 2.5E-26 T 14-10-2018 Tph_c04260 e73a067d39ad52e43470639773e477d7 382 Gene3D G3DSA:1.20.1090.10 184 382 5.9E-68 T 14-10-2018 Tph_c04260 e73a067d39ad52e43470639773e477d7 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 1.1E-118 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tph_c04260 e73a067d39ad52e43470639773e477d7 382 SUPERFAMILY SSF56796 6 381 2.09E-123 T 14-10-2018 Tph_c04260 e73a067d39ad52e43470639773e477d7 382 Gene3D G3DSA:3.40.50.1970 2 182 4.5E-55 T 14-10-2018 Tph_c14580 f77b6f4bb45aba1d1219d64b25f84bf4 143 Gene3D G3DSA:3.60.21.10 1 75 1.1E-6 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c14580 f77b6f4bb45aba1d1219d64b25f84bf4 143 SUPERFAMILY SSF56300 3 67 2.53E-8 T 14-10-2018 Tph_c20970 db8081f7a65a25d2bb5755becd42aed7 147 Gene3D G3DSA:2.60.40.790 2 146 7.7E-32 T 14-10-2018 IPR008978 HSP20-like chaperone Tph_c20970 db8081f7a65a25d2bb5755becd42aed7 147 Pfam PF00011 Hsp20/alpha crystallin family 48 144 2.0E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Tph_c20970 db8081f7a65a25d2bb5755becd42aed7 147 SUPERFAMILY SSF49764 18 145 6.13E-33 T 14-10-2018 IPR008978 HSP20-like chaperone Tph_c22840 8a8f3b4d5aa03934ca31c82ad51b8fe4 317 Pfam PF02073 Thermophilic metalloprotease (M29) 122 282 8.6E-7 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Tph_c22840 8a8f3b4d5aa03934ca31c82ad51b8fe4 317 SUPERFAMILY SSF144052 3 314 5.23E-59 T 14-10-2018 Tph_c26980 09140a428bf85d1d89a12095bc9e7522 163 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 6 80 2.7E-17 T 14-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like Tph_c13460 c574c703bcfbe38adcc7811222e0105a 176 Gene3D G3DSA:3.40.220.10 2 176 4.7E-67 T 14-10-2018 Tph_c13460 c574c703bcfbe38adcc7811222e0105a 176 SUPERFAMILY SSF52949 3 175 7.4E-63 T 14-10-2018 Tph_c13460 c574c703bcfbe38adcc7811222e0105a 176 Pfam PF01661 Macro domain 26 136 2.2E-38 T 14-10-2018 IPR002589 Macro domain Tph_c13460 c574c703bcfbe38adcc7811222e0105a 176 SMART SM00506 9 136 2.4E-49 T 14-10-2018 IPR002589 Macro domain Tph_c20930 ba315ea4fce18fcf01237657057e8e7c 249 Pfam PF04402 Protein of unknown function (DUF541) 43 246 1.2E-50 T 14-10-2018 IPR007497 Protein of unknown function DUF541 Tph_c20930 ba315ea4fce18fcf01237657057e8e7c 249 Gene3D G3DSA:3.30.70.2970 55 165 2.9E-66 T 14-10-2018 Tph_c20930 ba315ea4fce18fcf01237657057e8e7c 249 Gene3D G3DSA:3.30.110.170 45 246 2.9E-66 T 14-10-2018 Tph_c18790 07c863d2b40dae149a23779b8b8fd7b3 377 Gene3D G3DSA:3.40.50.11900 284 362 3.8E-5 T 14-10-2018 Tph_c18790 07c863d2b40dae149a23779b8b8fd7b3 377 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 8 237 4.2E-9 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Tph_c21380 5d7086b86bdb6ad7d04223cf38e0d4b0 181 Gene3D G3DSA:1.10.10.10 89 174 2.0E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c21380 5d7086b86bdb6ad7d04223cf38e0d4b0 181 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 141 147 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Tph_c21380 5d7086b86bdb6ad7d04223cf38e0d4b0 181 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 91 171 3.5E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Tph_c21380 5d7086b86bdb6ad7d04223cf38e0d4b0 181 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 93 172 2.9E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Tph_c21380 5d7086b86bdb6ad7d04223cf38e0d4b0 181 SUPERFAMILY SSF46767 91 172 5.23E-29 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 5.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 SMART SM00347 26 126 1.2E-28 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 SUPERFAMILY SSF46785 7 143 1.14E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 Gene3D G3DSA:1.10.10.10 1 141 8.5E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c19130 67e986b06d91c66519d6c3f9c18cba3e 150 Pfam PF01047 MarR family 39 90 2.3E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Tph_c28650 cb5a2559ddc35c3fbdbae97d478be4fd 126 Pfam PF06935 Protein of unknown function (DUF1284) 18 120 6.2E-23 T 14-10-2018 IPR009702 Protein of unknown function DUF1284 Tph_c02710 997368356ca2698fc982036b2d50e011 478 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 327 459 1.7E-17 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain Tph_c02710 997368356ca2698fc982036b2d50e011 478 Pfam PF13440 Polysaccharide biosynthesis protein 28 320 3.1E-21 T 14-10-2018 Tph_c07400 9186bced96e9d2a6cb7fea2bcecb15bb 326 Gene3D G3DSA:1.10.443.10 100 316 2.4E-29 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Tph_c07400 9186bced96e9d2a6cb7fea2bcecb15bb 326 SUPERFAMILY SSF56349 59 299 3.83E-28 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Tph_c07400 9186bced96e9d2a6cb7fea2bcecb15bb 326 Pfam PF00589 Phage integrase family 110 299 8.8E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Tph_c17480 ee1dfa13386951a985454b82a8df451e 230 ProSitePatterns PS01007 Transposases, Mutator family, signature. 70 94 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c17480 ee1dfa13386951a985454b82a8df451e 230 Pfam PF00872 Transposase, Mutator family 2 216 2.1E-54 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c13630 c3f498fb5e325cdcdf954b6ef9420693 260 Gene3D G3DSA:3.20.20.370 83 246 2.5E-41 T 14-10-2018 Tph_c13630 c3f498fb5e325cdcdf954b6ef9420693 260 Pfam PF01522 Polysaccharide deacetylase 128 227 6.0E-23 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 Tph_c13630 c3f498fb5e325cdcdf954b6ef9420693 260 SUPERFAMILY SSF88713 107 225 6.67E-32 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tph_c10080 305884360116a795779922b9e13a2238 345 Pfam PF01515 Phosphate acetyl/butaryl transferase 10 334 2.3E-120 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tph_c10080 305884360116a795779922b9e13a2238 345 PIRSF PIRSF000428 6 339 2.5E-106 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tph_c10080 305884360116a795779922b9e13a2238 345 Gene3D G3DSA:3.40.50.10950 17 337 4.5E-132 T 14-10-2018 Tph_c10080 305884360116a795779922b9e13a2238 345 Gene3D G3DSA:3.40.50.10750 149 310 4.5E-132 T 14-10-2018 Tph_c10080 305884360116a795779922b9e13a2238 345 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 25 334 1.5E-106 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 Tph_c10080 305884360116a795779922b9e13a2238 345 SUPERFAMILY SSF53659 10 337 5.35E-93 T 14-10-2018 Tph_c11110 6581f8eb552196efc510fd7e6c0e7ed0 547 Pfam PF03961 Flagellar Assembly Protein A 92 541 6.2E-128 T 14-10-2018 IPR005646 Flagellar assembly protein A Tph_c05700 0550270e6aca8b1fb1e4ed93a77372b7 153 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 142 26.386 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Tph_c05700 0550270e6aca8b1fb1e4ed93a77372b7 153 SUPERFAMILY SSF141457 1 141 2.48E-45 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Tph_c05700 0550270e6aca8b1fb1e4ed93a77372b7 153 Pfam PF02623 FliW protein 19 139 1.3E-37 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Tph_c05700 0550270e6aca8b1fb1e4ed93a77372b7 153 Gene3D G3DSA:2.30.290.10 1 147 2.1E-49 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Tph_c22560 4de6b6f6e8ee400fd5cf704cf00d77a9 101 Pfam PF17253 Family of unknown function (DUF5320) 43 97 5.6E-6 T 14-10-2018 IPR035205 Protein of unknown function DUF5320 Tph_c21960 c3909ae956ef65e5b2d4d8499310a208 70 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 19 65 8.2E-14 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Tph_c21960 c3909ae956ef65e5b2d4d8499310a208 70 Pfam PF12728 Helix-turn-helix domain 18 67 2.9E-15 T 14-10-2018 Tph_c08970 dd8632cccf8ec8ec02597b8936fb6775 501 ProSitePatterns PS00571 Amidases signature. 152 183 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Tph_c08970 dd8632cccf8ec8ec02597b8936fb6775 501 Gene3D G3DSA:3.90.1300.10 3 488 2.1E-202 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tph_c08970 dd8632cccf8ec8ec02597b8936fb6775 501 SUPERFAMILY SSF75304 1 488 4.32E-175 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tph_c08970 dd8632cccf8ec8ec02597b8936fb6775 501 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 479 6.4E-194 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tph_c08970 dd8632cccf8ec8ec02597b8936fb6775 501 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 481 95.561 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tph_c08970 dd8632cccf8ec8ec02597b8936fb6775 501 Pfam PF01425 Amidase 25 470 3.8E-164 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Tph_c24290 539fc3aa3616ab48db1e9dd00787c542 118 Pfam PF05717 IS66 Orf2 like protein 9 107 8.9E-42 T 14-10-2018 IPR008878 Transposase IS66, Orf2 Tph_c12530 bf06dc79eda7cc0d6d745b0ccf8b3784 338 Gene3D G3DSA:3.40.630.10 47 338 2.5E-57 T 14-10-2018 Tph_c12530 bf06dc79eda7cc0d6d745b0ccf8b3784 338 SUPERFAMILY SSF53187 51 336 1.89E-48 T 14-10-2018 Tph_c12530 bf06dc79eda7cc0d6d745b0ccf8b3784 338 Pfam PF04389 Peptidase family M28 132 328 4.5E-43 T 14-10-2018 IPR007484 Peptidase M28 Tph_c07910 279065ab4d3b871a1b9f2716cc103bd3 299 Pfam PF00665 Integrase core domain 124 243 1.6E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c07910 279065ab4d3b871a1b9f2716cc103bd3 299 Pfam PF13276 HTH-like domain 64 107 4.8E-11 T 14-10-2018 IPR025948 HTH-like domain Tph_c07910 279065ab4d3b871a1b9f2716cc103bd3 299 Gene3D G3DSA:3.30.420.10 119 279 3.7E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c07910 279065ab4d3b871a1b9f2716cc103bd3 299 SUPERFAMILY SSF53098 117 285 2.15E-32 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c28400 80452d44094a5c4e1c444cff4eb74a3d 276 PIRSF PIRSF032067 3 269 7.6E-80 T 14-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 Tph_c28400 80452d44094a5c4e1c444cff4eb74a3d 276 Pfam PF03575 Peptidase family S51 9 209 1.0E-24 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Tph_c28400 80452d44094a5c4e1c444cff4eb74a3d 276 Gene3D G3DSA:3.40.50.880 4 267 5.3E-86 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c28400 80452d44094a5c4e1c444cff4eb74a3d 276 SUPERFAMILY SSF52317 8 223 6.11E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c28400 80452d44094a5c4e1c444cff4eb74a3d 276 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 9 258 2.4E-101 T 14-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 Tph_c25830 3a1f99b4075f20214b9ab722ae7d75a3 98 Pfam PF00276 Ribosomal protein L23 6 92 5.6E-36 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Tph_c25830 3a1f99b4075f20214b9ab722ae7d75a3 98 Gene3D G3DSA:3.30.70.330 1 97 3.2E-39 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Tph_c25830 3a1f99b4075f20214b9ab722ae7d75a3 98 SUPERFAMILY SSF54189 4 95 4.68E-34 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c25830 3a1f99b4075f20214b9ab722ae7d75a3 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 24.544 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Tph_c09080 dae46d6d026b1f6cad8d2f473261643c 445 Gene3D G3DSA:3.40.50.2000 186 366 7.0E-108 T 14-10-2018 Tph_c09080 dae46d6d026b1f6cad8d2f473261643c 445 SUPERFAMILY SSF53756 1 386 4.71E-105 T 14-10-2018 Tph_c09080 dae46d6d026b1f6cad8d2f473261643c 445 Pfam PF13439 Glycosyltransferase Family 4 15 190 1.1E-34 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c09080 dae46d6d026b1f6cad8d2f473261643c 445 Pfam PF00534 Glycosyl transferases group 1 203 364 3.2E-44 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c09080 dae46d6d026b1f6cad8d2f473261643c 445 Gene3D G3DSA:3.40.50.2000 5 383 7.0E-108 T 14-10-2018 Tph_c28960 703184d1b39111303386a7495e7582b2 463 Pfam PF02386 Cation transport protein 29 443 1.0E-55 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 Tph_c28960 703184d1b39111303386a7495e7582b2 463 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 45 434 3.7E-108 T 14-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 Tph_c01570 c41257ab1272631c379cbaef2d7b7bd1 375 SUPERFAMILY SSF53807 53 371 7.85E-61 T 14-10-2018 Tph_c01570 c41257ab1272631c379cbaef2d7b7bd1 375 Gene3D G3DSA:3.40.50.1980 48 182 2.3E-44 T 14-10-2018 Tph_c01570 c41257ab1272631c379cbaef2d7b7bd1 375 Gene3D G3DSA:3.40.50.1980 212 318 2.7E-69 T 14-10-2018 Tph_c01570 c41257ab1272631c379cbaef2d7b7bd1 375 Gene3D G3DSA:1.20.58.2180 187 365 2.7E-69 T 14-10-2018 Tph_c01570 c41257ab1272631c379cbaef2d7b7bd1 375 Pfam PF01497 Periplasmic binding protein 112 312 4.8E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain Tph_c15810 ddd833ce1dfb6bf24ef05f56a0db3e78 363 Gene3D G3DSA:1.10.3470.10 16 358 4.2E-106 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c15810 ddd833ce1dfb6bf24ef05f56a0db3e78 363 SUPERFAMILY SSF81345 10 352 4.84E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c15810 ddd833ce1dfb6bf24ef05f56a0db3e78 363 Pfam PF01032 FecCD transport family 29 352 4.4E-97 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 ProSitePatterns PS01128 Shikimate kinase signature. 59 84 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 Hamap MF_00109 Shikimate kinase [aroK]. 3 169 26.497 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 PRINTS PR01100 Shikimate kinase family signature 30 43 2.2E-18 T 14-10-2018 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 PRINTS PR01100 Shikimate kinase family signature 97 114 2.2E-18 T 14-10-2018 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 PRINTS PR01100 Shikimate kinase family signature 6 21 2.2E-18 T 14-10-2018 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 PRINTS PR01100 Shikimate kinase family signature 58 66 2.2E-18 T 14-10-2018 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 PRINTS PR01100 Shikimate kinase family signature 76 85 2.2E-18 T 14-10-2018 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 Pfam PF01202 Shikimate kinase 12 168 3.8E-42 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 SUPERFAMILY SSF52540 4 171 2.89E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16680 11911b5dbcdc156a78c9cce3408e99b0 186 Gene3D G3DSA:3.40.50.300 1 175 1.1E-53 T 14-10-2018 Tph_c06240 1f83d5d4385d6f4e362db9993ee05e48 88 Gene3D G3DSA:1.10.10.10 2 73 2.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c06240 1f83d5d4385d6f4e362db9993ee05e48 88 Pfam PF08281 Sigma-70, region 4 13 63 1.3E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c06240 1f83d5d4385d6f4e362db9993ee05e48 88 SUPERFAMILY SSF88659 4 70 6.73E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c21820 86af5111f70fc00e9c484f6fcc0d7b73 78 Pfam PF04294 VanW like protein 12 51 2.5E-6 T 14-10-2018 IPR007391 Vancomycin resistance VanW Tph_c22660 8a9b3eef5d05b7ca99e7e88e9f99fb27 755 Gene3D G3DSA:2.60.40.1080 494 588 3.7E-5 T 14-10-2018 Tph_c22660 8a9b3eef5d05b7ca99e7e88e9f99fb27 755 Pfam PF09992 Phosphodiester glycosidase 287 405 1.0E-29 T 14-10-2018 IPR018711 Phosphodiester glycosidase Tph_c22660 8a9b3eef5d05b7ca99e7e88e9f99fb27 755 Pfam PF00395 S-layer homology domain 642 684 1.8E-13 T 14-10-2018 IPR001119 S-layer homology domain Tph_c22660 8a9b3eef5d05b7ca99e7e88e9f99fb27 755 Pfam PF00395 S-layer homology domain 586 624 8.3E-13 T 14-10-2018 IPR001119 S-layer homology domain Tph_c22660 8a9b3eef5d05b7ca99e7e88e9f99fb27 755 Pfam PF00395 S-layer homology domain 702 744 1.0E-10 T 14-10-2018 IPR001119 S-layer homology domain Tph_c17780 59dea71ec74a2f3d43e0b3e6d2218cc3 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 11 204 2.5E-70 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17780 59dea71ec74a2f3d43e0b3e6d2218cc3 212 SUPERFAMILY SSF51391 7 209 9.16E-71 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17780 59dea71ec74a2f3d43e0b3e6d2218cc3 212 Gene3D G3DSA:3.20.20.70 2 209 1.3E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c17780 59dea71ec74a2f3d43e0b3e6d2218cc3 212 Pfam PF02581 Thiamine monophosphate synthase 11 192 1.8E-69 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c17780 59dea71ec74a2f3d43e0b3e6d2218cc3 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 210 30.613 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 SMART SM00382 145 326 6.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 11 422 1.7E-197 T 14-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 342 4.3E-76 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 3 422 4.1E-183 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 SUPERFAMILY SSF52540 79 345 3.55E-98 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10850 36c262313fabd06125201ca43e01cdd9 433 Gene3D G3DSA:3.40.50.12240 3 425 7.4E-153 T 14-10-2018 Tph_c02040 5fdc018858d55987c17765c18eee8b4b 293 Gene3D G3DSA:1.10.357.140 12 156 8.4E-11 T 14-10-2018 Tph_c02040 5fdc018858d55987c17765c18eee8b4b 293 Pfam PF01040 UbiA prenyltransferase family 20 248 2.2E-22 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Tph_c27140 e990ba63f5c62ef23bbeeaf37fd6b9f6 82 Gene3D G3DSA:1.10.10.60 1 82 1.0E-36 T 14-10-2018 Tph_c27140 e990ba63f5c62ef23bbeeaf37fd6b9f6 82 Pfam PF12116 Stage III sporulation protein D 2 80 6.4E-41 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Tph_c27140 e990ba63f5c62ef23bbeeaf37fd6b9f6 82 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 Tph_c27140 e990ba63f5c62ef23bbeeaf37fd6b9f6 82 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 3 80 2.6E-41 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 Pfam PF08281 Sigma-70, region 4 125 177 9.3E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 Pfam PF04542 Sigma-70 region 2 25 90 5.1E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 Gene3D G3DSA:1.10.10.10 108 185 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 179 1.8E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 Gene3D G3DSA:1.10.1740.10 1 107 3.9E-29 T 14-10-2018 Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 SUPERFAMILY SSF88659 112 183 1.21E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Tph_c20950 95f2ff5db279122adec0f644102eb95a 211 SUPERFAMILY SSF88946 2 100 5.81E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Tph_c16180 88641dfb72c7ecd8a95775f57d306e5a 291 Pfam PF11382 Copper transport outer membrane protein, MctB 4 288 2.6E-48 T 14-10-2018 IPR021522 Copper transporter MctB GO:0016020|GO:0055070 Tph_c14120 37afdd586487459fcf72e4119de36070 107 SUPERFAMILY SSF103481 33 104 6.8E-11 T 14-10-2018 Tph_c14120 37afdd586487459fcf72e4119de36070 107 Gene3D G3DSA:1.10.3730.20 1 106 5.9E-7 T 14-10-2018 Tph_c14120 37afdd586487459fcf72e4119de36070 107 Pfam PF00892 EamA-like transporter family 36 103 7.8E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 SUPERFAMILY SSF52283 8 183 7.14E-46 T 14-10-2018 Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 157 381 7.2E-67 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 SUPERFAMILY SSF51735 152 323 3.94E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 Gene3D G3DSA:3.40.50.720 152 333 3.9E-131 T 14-10-2018 Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 9 152 3.6E-44 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 SMART SM01002 161 326 1.2E-63 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 SMART SM01003 9 152 5.8E-60 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Tph_c27750 72ab2053bf90a02da291c6bfdf89d00c 392 Gene3D G3DSA:3.40.50.720 8 378 3.9E-131 T 14-10-2018 Tph_c20080 dc5f94a0591b783a72cae381ad4a8495 132 SUPERFAMILY SSF52540 29 117 1.53E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15110 d37ba99488abc383f7abd4db5e5f41d2 223 Pfam PF12225 Methylene-tetrahydrofolate reductase C terminal 111 204 1.5E-37 T 14-10-2018 IPR022026 Methylene-tetrahydrofolate reductase C-terminal Tph_c02480 84b779131ab8414a93c8e262cb76b0a7 111 Pfam PF01909 Nucleotidyltransferase domain 13 66 6.6E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c02480 84b779131ab8414a93c8e262cb76b0a7 111 Gene3D G3DSA:3.30.460.10 4 104 1.6E-15 T 14-10-2018 Tph_c02480 84b779131ab8414a93c8e262cb76b0a7 111 SUPERFAMILY SSF81301 9 110 1.25E-14 T 14-10-2018 Tph_c16810 f988953e4cd0298cc99264527edd1af6 323 SUPERFAMILY SSF48452 198 301 6.96E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c16810 f988953e4cd0298cc99264527edd1af6 323 Gene3D G3DSA:1.25.40.10 185 315 5.8E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c16810 f988953e4cd0298cc99264527edd1af6 323 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 107 309 1.3E-50 T 14-10-2018 IPR018708 Protein of unknown function DUF2225 Tph_c17630 5d08ccda9ba6c560089c530f42bf91d9 407 Pfam PF01610 Transposase 165 389 1.2E-46 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain Tph_c24740 9f64c97edde873a151478a33fbc02c52 279 Gene3D G3DSA:1.10.287.540 1 61 3.9E-12 T 14-10-2018 Tph_c24740 9f64c97edde873a151478a33fbc02c52 279 Pfam PF00152 tRNA synthetases class II (D, K and N) 73 169 3.9E-5 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c24740 9f64c97edde873a151478a33fbc02c52 279 TIGRFAM TIGR02367 PylS_Cterm: pyrrolysine--tRNA ligase, C-terminal region 38 279 3.0E-101 T 14-10-2018 IPR023877 Pyrrolysyl-tRNA ligase, C-terminal GO:0004812 KEGG: 00970+6.1.1.26 Tph_c24740 9f64c97edde873a151478a33fbc02c52 279 SUPERFAMILY SSF55681 64 263 9.21E-25 T 14-10-2018 Tph_c24740 9f64c97edde873a151478a33fbc02c52 279 Gene3D G3DSA:3.30.930.10 62 279 2.7E-54 T 14-10-2018 Tph_c04150 15de1cbad5f04f5907b407ecba75a0eb 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 192 5.6E-55 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Tph_c04150 15de1cbad5f04f5907b407ecba75a0eb 197 Gene3D G3DSA:3.90.950.10 1 197 1.4E-78 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tph_c04150 15de1cbad5f04f5907b407ecba75a0eb 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 50.711 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Tph_c04150 15de1cbad5f04f5907b407ecba75a0eb 197 SUPERFAMILY SSF52972 1 194 5.49E-70 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Tph_c04150 15de1cbad5f04f5907b407ecba75a0eb 197 Pfam PF01725 Ham1 family 4 190 5.5E-57 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Tph_c05820 ad8bc7468a9b73426e628a873ff58e65 199 SUPERFAMILY SSF52218 3 190 6.37E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c05820 ad8bc7468a9b73426e628a873ff58e65 199 Pfam PF03358 NADPH-dependent FMN reductase 1 152 2.2E-31 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Tph_c05820 ad8bc7468a9b73426e628a873ff58e65 199 Gene3D G3DSA:3.40.50.360 9 197 2.1E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 Pfam PF08345 Flagellar M-ring protein C-terminal 256 403 1.3E-37 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 4 512 4.7E-100 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 PRINTS PR01009 Flagellar M-ring protein signature 121 139 2.1E-25 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 PRINTS PR01009 Flagellar M-ring protein signature 196 214 2.1E-25 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 PRINTS PR01009 Flagellar M-ring protein signature 153 167 2.1E-25 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 PRINTS PR01009 Flagellar M-ring protein signature 340 364 2.1E-25 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 PRINTS PR01009 Flagellar M-ring protein signature 269 287 2.1E-25 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 Pfam PF01514 Secretory protein of YscJ/FliF family 31 220 2.0E-70 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 PIRSF PIRSF004862 2 514 1.7E-143 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Tph_c10820 871519b2ea583b92beda5c3020fc251f 514 Gene3D G3DSA:3.30.300.30 122 225 7.6E-15 T 14-10-2018 Tph_c20620 67c242130013629fb028489e1dedce92 113 Gene3D G3DSA:3.30.565.10 5 103 1.9E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c20620 67c242130013629fb028489e1dedce92 113 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 13 100 3.3E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c20620 67c242130013629fb028489e1dedce92 113 SUPERFAMILY SSF55874 13 99 3.41E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c05660 688d327a83db27b5b93fd11eaa5fc4f1 167 SUPERFAMILY SSF140566 23 136 3.66E-6 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 SUPERFAMILY SSF142019 7 168 2.09E-37 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 SUPERFAMILY SSF142984 162 229 5.62E-13 T 14-10-2018 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 PIRSF PIRSF036408 2 442 4.2E-157 T 14-10-2018 IPR017054 Propanediol utilization protein, PduS, predicted Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 Pfam PF10531 SLBB domain 164 209 3.8E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 Gene3D G3DSA:3.40.50.11540 16 160 3.8E-12 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 Pfam PF13375 RnfC Barrel sandwich hybrid domain 380 437 4.8E-11 T 14-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 253 264 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 Gene3D G3DSA:3.10.20.600 161 223 2.5E-5 T 14-10-2018 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 11 151 1.3E-38 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 SUPERFAMILY SSF46548 203 329 4.19E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Tph_c07030 42bd697058a138c1ddea863f109e0ec6 443 Pfam PF13534 4Fe-4S dicluster domain 252 313 4.1E-11 T 14-10-2018 Tph_c16540 c97bdf9de48344e5fd6385e2b0ec939e 251 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 93 1.1E-33 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal Tph_c16540 c97bdf9de48344e5fd6385e2b0ec939e 251 Pfam PF01478 Type IV leader peptidase family 104 206 6.0E-19 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Tph_c12190 b8283a147e9de00f44b3548be0cb2d55 371 Pfam PF02371 Transposase IS116/IS110/IS902 family 282 367 3.5E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c12190 b8283a147e9de00f44b3548be0cb2d55 371 Pfam PF01548 Transposase 5 165 1.9E-23 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c19560 8d0e0b04dd5ad3723b3d3411ae2191b7 317 Gene3D G3DSA:3.30.930.10 12 241 9.5E-40 T 14-10-2018 Tph_c19560 8d0e0b04dd5ad3723b3d3411ae2191b7 317 SUPERFAMILY SSF55681 4 241 2.41E-41 T 14-10-2018 Tph_c03500 68580e95a0e39f1d3512f88ab7f5bd20 244 Pfam PF01061 ABC-2 type transporter 6 210 5.2E-28 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Tph_c03500 68580e95a0e39f1d3512f88ab7f5bd20 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 5.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c03500 68580e95a0e39f1d3512f88ab7f5bd20 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 133 157 5.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c03500 68580e95a0e39f1d3512f88ab7f5bd20 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 170 189 5.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c03500 68580e95a0e39f1d3512f88ab7f5bd20 244 PRINTS PR00164 ABC-2 type transport system membrane protein signature 23 44 5.9E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c03500 68580e95a0e39f1d3512f88ab7f5bd20 244 PIRSF PIRSF006648 6 243 4.3E-29 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c17190 b05a18ce3fb822984bbd694dbed40479 483 Gene3D G3DSA:3.40.640.10 82 310 1.3E-64 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c17190 b05a18ce3fb822984bbd694dbed40479 483 SUPERFAMILY SSF53383 4 480 4.98E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c17190 b05a18ce3fb822984bbd694dbed40479 483 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 2 481 59.62 T 14-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 Tph_c17190 b05a18ce3fb822984bbd694dbed40479 483 Gene3D G3DSA:3.90.1150.10 333 465 1.8E-45 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c17190 b05a18ce3fb822984bbd694dbed40479 483 Pfam PF02347 Glycine cleavage system P-protein 28 296 1.3E-15 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Tph_c03380 0aecc3931afa9e25fe02379f61330af2 336 Pfam PF04754 Putative transposase, YhgA-like 7 105 3.0E-8 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like Tph_c21750 cbc17ebf172ecd74306af9a20590d185 83 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 3 34 1.8E-8 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c21750 cbc17ebf172ecd74306af9a20590d185 83 Pfam PF07282 Putative transposase DNA-binding domain 7 76 4.8E-26 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c24460 9ecf50750476ea84c21bcece89ef0f66 417 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 3 388 2.8E-69 T 14-10-2018 IPR019016 CRISPR-associated DxTHG protein Tph_c24460 9ecf50750476ea84c21bcece89ef0f66 417 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 104 118 0.001 T 14-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site Tph_c28440 2b85132518d0263814d64721f3d6db71 214 Gene3D G3DSA:3.40.33.10 47 212 1.0E-54 T 14-10-2018 IPR035940 CAP superfamily Tph_c28440 2b85132518d0263814d64721f3d6db71 214 Pfam PF00188 Cysteine-rich secretory protein family 96 211 8.3E-16 T 14-10-2018 IPR014044 CAP domain Tph_c28440 2b85132518d0263814d64721f3d6db71 214 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 89 212 1.0E-53 T 14-10-2018 IPR014258 CAP domain, YkwD-like Tph_c28440 2b85132518d0263814d64721f3d6db71 214 SUPERFAMILY SSF55797 88 211 1.96E-22 T 14-10-2018 IPR035940 CAP superfamily Tph_c11910 744f4af56a37c47be5d3c0676832555d 450 Pfam PF05866 Endodeoxyribonuclease RusA 384 447 1.6E-10 T 14-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 Tph_c11910 744f4af56a37c47be5d3c0676832555d 450 SUPERFAMILY SSF103084 382 448 2.35E-11 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Tph_c11910 744f4af56a37c47be5d3c0676832555d 450 Gene3D G3DSA:3.30.1330.70 361 450 6.2E-7 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 Tph_c19500 3f3be5425f4b6ff3877998f5cfe98735 182 SUPERFAMILY SSF52499 4 182 2.35E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tph_c19500 3f3be5425f4b6ff3877998f5cfe98735 182 Gene3D G3DSA:3.40.50.850 2 182 1.8E-50 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 Tph_c19500 3f3be5425f4b6ff3877998f5cfe98735 182 Pfam PF00857 Isochorismatase family 12 159 9.9E-27 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 Tph_c01190 1db3e388ffd9e8e292e84d23f812f9d8 349 Gene3D G3DSA:1.10.3470.10 14 348 7.2E-103 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c01190 1db3e388ffd9e8e292e84d23f812f9d8 349 SUPERFAMILY SSF81345 12 343 8.5E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c01190 1db3e388ffd9e8e292e84d23f812f9d8 349 Pfam PF01032 FecCD transport family 28 343 4.5E-89 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tph_c18300 56f9904c92d6ebc918560214bc3a6421 218 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 73 95 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tph_c18300 56f9904c92d6ebc918560214bc3a6421 218 Gene3D G3DSA:1.20.120.1760 11 192 2.8E-13 T 14-10-2018 Tph_c18300 56f9904c92d6ebc918560214bc3a6421 218 Pfam PF01066 CDP-alcohol phosphatidyltransferase 32 95 6.6E-12 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Tph_c26910 22275ecc31175520160c71543987bf47 437 SUPERFAMILY SSF56762 4 427 1.44E-80 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26910 22275ecc31175520160c71543987bf47 437 Pfam PF00374 Nickel-dependent hydrogenase 42 127 1.4E-20 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tph_c26910 22275ecc31175520160c71543987bf47 437 Pfam PF00374 Nickel-dependent hydrogenase 285 427 2.5E-7 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 Tph_c26910 22275ecc31175520160c71543987bf47 437 Gene3D G3DSA:1.10.645.10 2 427 5.2E-99 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c09820 59a349757ac402ab4f41ee82299a9b48 306 PIRSF PIRSF036979 1 288 1.7E-90 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tph_c09820 59a349757ac402ab4f41ee82299a9b48 306 Gene3D G3DSA:3.40.800.10 16 293 2.7E-92 T 14-10-2018 Tph_c09820 59a349757ac402ab4f41ee82299a9b48 306 ProSitePatterns PS01053 Arginase family signature. 213 234 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Tph_c09820 59a349757ac402ab4f41ee82299a9b48 306 SUPERFAMILY SSF52768 16 285 2.16E-82 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Tph_c09820 59a349757ac402ab4f41ee82299a9b48 306 TIGRFAM TIGR01230 agmatinase: agmatinase 12 283 3.9E-90 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Tph_c09820 59a349757ac402ab4f41ee82299a9b48 306 Pfam PF00491 Arginase family 23 282 3.5E-76 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Tph_c06540 cd1de8aede4f4cf3bf850a452fac68ea 295 Gene3D G3DSA:3.30.70.3040 47 157 2.2E-11 T 14-10-2018 Tph_c06540 cd1de8aede4f4cf3bf850a452fac68ea 295 PIRSF PIRSF003097 2 295 1.0E-90 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Tph_c06540 cd1de8aede4f4cf3bf850a452fac68ea 295 Pfam PF02687 FtsX-like permease family 200 269 2.5E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tph_c04870 6d79b34d5b6ff69deef61c24e4c7d14c 218 Gene3D G3DSA:1.20.58.220 2 218 2.3E-79 T 14-10-2018 IPR038078 PhoU-like domain superfamily Tph_c04870 6d79b34d5b6ff69deef61c24e4c7d14c 218 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 213 1.1E-67 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Tph_c04870 6d79b34d5b6ff69deef61c24e4c7d14c 218 SUPERFAMILY SSF109755 3 216 6.07E-72 T 14-10-2018 Tph_c04870 6d79b34d5b6ff69deef61c24e4c7d14c 218 PIRSF PIRSF003107 1 218 4.1E-74 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 Tph_c04870 6d79b34d5b6ff69deef61c24e4c7d14c 218 Pfam PF01895 PhoU domain 120 204 5.7E-17 T 14-10-2018 IPR026022 PhoU domain Tph_c04870 6d79b34d5b6ff69deef61c24e4c7d14c 218 Pfam PF01895 PhoU domain 19 104 5.4E-23 T 14-10-2018 IPR026022 PhoU domain Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 34 91 3.4E-17 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 Pfam PF14501 GHKL domain 129 220 2.0E-13 T 14-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 Gene3D G3DSA:1.10.287.130 24 88 2.2E-9 T 14-10-2018 Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 Gene3D G3DSA:3.30.565.10 89 233 9.5E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 SUPERFAMILY SSF55874 100 234 1.3E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 SUPERFAMILY SSF55890 36 119 8.63E-17 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 186 196 9.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 197 215 9.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 PRINTS PR00344 Bacterial sensor protein C-terminal signature 221 234 9.3E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Tph_c14710 8996efa1d9ec65e876469dab0f948cef 240 SMART SM00387 128 237 9.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Tph_c08800 aeca1b778f9fe8738d2415f111266715 83 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 2 72 2.7E-15 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Tph_c08800 aeca1b778f9fe8738d2415f111266715 83 Gene3D G3DSA:3.30.300.210 1 76 1.6E-17 T 14-10-2018 IPR038501 Spore germination GerAC superfamily Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 Pfam PF01546 Peptidase family M20/M25/M40 78 372 1.8E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 Pfam PF07687 Peptidase dimerisation domain 186 275 1.1E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 Gene3D G3DSA:3.40.630.10 20 368 1.6E-125 T 14-10-2018 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 SUPERFAMILY SSF53187 10 373 4.19E-57 T 14-10-2018 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 Gene3D G3DSA:3.30.70.360 181 292 1.6E-125 T 14-10-2018 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 SUPERFAMILY SSF55031 183 292 4.19E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 11 367 2.4E-113 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 PIRSF PIRSF001123 9 110 0.039 T 14-10-2018 IPR008007 Peptidase M42 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 PIRSF PIRSF001123 285 383 0.0011 T 14-10-2018 IPR008007 Peptidase M42 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 PIRSF PIRSF001123 90 184 0.0017 T 14-10-2018 IPR008007 Peptidase M42 Tph_c16150 88cbee2693c7fcbc758578eb88807298 389 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 Tph_c19520 df41fd4f0d4b3ed19c939f4f62e59429 333 Gene3D G3DSA:3.20.20.70 6 303 5.4E-27 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c19520 df41fd4f0d4b3ed19c939f4f62e59429 333 Pfam PF04055 Radical SAM superfamily 49 192 5.6E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Tph_c19520 df41fd4f0d4b3ed19c939f4f62e59429 333 SUPERFAMILY SSF102114 25 287 1.83E-32 T 14-10-2018 Tph_c19520 df41fd4f0d4b3ed19c939f4f62e59429 333 SMART SM00729 44 246 2.7E-6 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Tph_c21310 2da4bfc24e08ddb209ae34cd1409ebd3 116 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 43 54 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c21310 2da4bfc24e08ddb209ae34cd1409ebd3 116 Pfam PF13187 4Fe-4S dicluster domain 42 89 1.5E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c21310 2da4bfc24e08ddb209ae34cd1409ebd3 116 Gene3D G3DSA:3.30.70.20 16 64 1.3E-8 T 14-10-2018 Tph_c21310 2da4bfc24e08ddb209ae34cd1409ebd3 116 Gene3D G3DSA:3.30.70.20 65 107 1.8E-5 T 14-10-2018 Tph_c21310 2da4bfc24e08ddb209ae34cd1409ebd3 116 SUPERFAMILY SSF54862 21 98 2.81E-18 T 14-10-2018 Tph_c17970 dced421302d584e72da151c4cabbaccb 135 Pfam PF08859 DGC domain 14 119 2.5E-28 T 14-10-2018 IPR014958 DGC Tph_c17970 dced421302d584e72da151c4cabbaccb 135 PIRSF PIRSF037181 1 134 2.4E-28 T 14-10-2018 IPR014958 DGC Tph_c17400 ef881996093b63c1c0542962d0021eeb 222 Pfam PF04647 Accessory gene regulator B 9 189 3.1E-41 T 14-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Tph_c17400 ef881996093b63c1c0542962d0021eeb 222 SMART SM00793 6 198 6.3E-23 T 14-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Tph_c20030 718ad3bbccf2eaf381a3c5467561b211 573 Pfam PF03235 Protein of unknown function DUF262 11 250 2.9E-29 T 14-10-2018 IPR004919 Domain of unknown function DUF262 Tph_c29070 426581996275aea4bd01e3be57bd571c 178 Gene3D G3DSA:3.40.140.10 1 164 3.4E-64 T 14-10-2018 Tph_c29070 426581996275aea4bd01e3be57bd571c 178 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 47.787 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Tph_c29070 426581996275aea4bd01e3be57bd571c 178 Pfam PF14437 MafB19-like deaminase 10 155 7.8E-38 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Tph_c29070 426581996275aea4bd01e3be57bd571c 178 SUPERFAMILY SSF53927 5 154 6.86E-57 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 Gene3D G3DSA:3.40.50.10240 3 212 3.3E-52 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 148 199 2.5E-6 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 SUPERFAMILY SSF63862 138 208 5.75E-6 T 14-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 SUPERFAMILY SSF63999 3 127 2.75E-33 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 SMART SM00983 146 205 6.0E-7 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 206 2.6E-45 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c17760 9dbace3b538180e3c0f2123dad653a35 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 27 127 2.2E-22 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 Tph_c00600 29731e444ad93537b01e80fcbeeaff43 906 Pfam PF03699 Uncharacterised protein family (UPF0182) 10 776 1.3E-276 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Tph_c00600 29731e444ad93537b01e80fcbeeaff43 906 Hamap MF_01600 UPF0182 protein . 1 851 18.61 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Tph_c01910 27b683225f6aa66518e0a12ba4964224 428 Gene3D G3DSA:1.10.10.2840 289 421 5.3E-23 T 14-10-2018 Tph_c01910 27b683225f6aa66518e0a12ba4964224 428 Pfam PF13556 PucR C-terminal helix-turn-helix domain 358 415 2.5E-17 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tph_c04060 e92e7ceeed95d7200c5346e6253034f1 283 Gene3D G3DSA:3.20.20.140 2 283 6.2E-53 T 14-10-2018 Tph_c04060 e92e7ceeed95d7200c5346e6253034f1 283 Pfam PF04909 Amidohydrolase 8 283 6.8E-36 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Tph_c04060 e92e7ceeed95d7200c5346e6253034f1 283 SUPERFAMILY SSF51556 6 283 1.57E-54 T 14-10-2018 IPR032466 Metal-dependent hydrolase Tph_c05650 aebd15f7f8f56760dc62e0ea0e3c52d2 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 27 99 1.2E-14 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 Tph_c05650 aebd15f7f8f56760dc62e0ea0e3c52d2 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 99 8.7E-16 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal Tph_c05650 aebd15f7f8f56760dc62e0ea0e3c52d2 105 SUPERFAMILY SSF101498 27 99 7.32E-12 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily Tph_c29040 7ac9baa28bcad7237c0d6aca606f55bd 315 SUPERFAMILY SSF52402 6 309 9.31E-53 T 14-10-2018 Tph_c29040 7ac9baa28bcad7237c0d6aca606f55bd 315 TIGRFAM TIGR00552 nadE: NAD+ synthetase 18 133 1.2E-19 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Tph_c29040 7ac9baa28bcad7237c0d6aca606f55bd 315 TIGRFAM TIGR00552 nadE: NAD+ synthetase 164 306 7.1E-37 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Tph_c29040 7ac9baa28bcad7237c0d6aca606f55bd 315 Pfam PF02540 NAD synthase 167 305 2.7E-38 T 14-10-2018 IPR022310 NAD/GMP synthase Tph_c29040 7ac9baa28bcad7237c0d6aca606f55bd 315 Pfam PF02540 NAD synthase 20 107 1.8E-22 T 14-10-2018 IPR022310 NAD/GMP synthase Tph_c05440 73d7b04b4048005980fe52d2430796bc 59 Pfam PF04964 Flp/Fap pilin component 11 52 1.4E-11 T 14-10-2018 IPR007047 Flp/Fap pilin component Tph_c10810 14fd1cd3168af1df5ead892366d95b21 99 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 24 98 6.7E-19 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tph_c10810 14fd1cd3168af1df5ead892366d95b21 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 84 97 2.8E-11 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tph_c10810 14fd1cd3168af1df5ead892366d95b21 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 29 45 2.8E-11 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tph_c10810 14fd1cd3168af1df5ead892366d95b21 99 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 63 79 2.8E-11 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tph_c10810 14fd1cd3168af1df5ead892366d95b21 99 Pfam PF02049 Flagellar hook-basal body complex protein FliE 22 98 8.3E-22 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tph_c10810 14fd1cd3168af1df5ead892366d95b21 99 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 99 15.247 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Tph_c05510 bc78f891ed1289bc3f1299b5f31792e8 319 Gene3D G3DSA:1.20.81.30 141 254 7.8E-13 T 14-10-2018 Tph_c05510 bc78f891ed1289bc3f1299b5f31792e8 319 Pfam PF00482 Type II secretion system (T2SS), protein F 152 276 3.9E-22 T 14-10-2018 IPR018076 Type II secretion system F domain Tph_c13870 6e3730bd73d06f11e2796bcbc2864054 450 Pfam PF00850 Histone deacetylase domain 70 276 1.3E-60 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tph_c13870 6e3730bd73d06f11e2796bcbc2864054 450 PRINTS PR01270 Histone deacetylase superfamily signature 141 156 1.4E-5 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tph_c13870 6e3730bd73d06f11e2796bcbc2864054 450 PRINTS PR01270 Histone deacetylase superfamily signature 227 237 1.4E-5 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tph_c13870 6e3730bd73d06f11e2796bcbc2864054 450 Gene3D G3DSA:3.40.800.20 7 332 7.7E-79 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Tph_c13870 6e3730bd73d06f11e2796bcbc2864054 450 SUPERFAMILY SSF52768 2 329 6.71E-88 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Tph_c24610 0cc5ab7bc7ab0a36b29a67503ec1d839 482 Pfam PF03553 Na+/H+ antiporter family 16 184 3.3E-12 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 Tph_c23300 fbee097cba96a51185b124aa6e81ffa6 227 Pfam PF13276 HTH-like domain 64 107 3.1E-11 T 14-10-2018 IPR025948 HTH-like domain Tph_c23300 fbee097cba96a51185b124aa6e81ffa6 227 Pfam PF00665 Integrase core domain 124 212 1.1E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c23300 fbee097cba96a51185b124aa6e81ffa6 227 Gene3D G3DSA:3.30.420.10 119 218 1.7E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c23300 fbee097cba96a51185b124aa6e81ffa6 227 SUPERFAMILY SSF53098 117 213 1.77E-14 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c06250 ff0e791ffeaf0d2e11e574b243605b41 248 Pfam PF14285 Domain of unknown function (DUF4367) 134 244 4.2E-10 T 14-10-2018 IPR025377 Domain of unknown function DUF4367 Tph_c06180 ff0e791ffeaf0d2e11e574b243605b41 248 Pfam PF14285 Domain of unknown function (DUF4367) 134 244 4.2E-10 T 14-10-2018 IPR025377 Domain of unknown function DUF4367 Tph_c02650 e2296d42b020b089ef4ce30faea60c7f 241 Gene3D G3DSA:3.40.50.300 2 236 2.5E-75 T 14-10-2018 Tph_c02650 e2296d42b020b089ef4ce30faea60c7f 241 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 51 222 5.3E-12 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c02650 e2296d42b020b089ef4ce30faea60c7f 241 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 28 231 1.2E-58 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 Tph_c02650 e2296d42b020b089ef4ce30faea60c7f 241 SUPERFAMILY SSF52540 47 227 2.13E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c01120 4df7d4cbb92e23c1657b8aa710bd5aff 260 Pfam PF01578 Cytochrome C assembly protein 68 257 6.0E-45 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Tph_c16300 ce4c9c2305a6832505f30bd9acc298c7 415 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 398 27.57 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Tph_c16300 ce4c9c2305a6832505f30bd9acc298c7 415 Pfam PF02601 Exonuclease VII, large subunit 125 338 4.3E-75 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Tph_c16300 ce4c9c2305a6832505f30bd9acc298c7 415 Pfam PF02601 Exonuclease VII, large subunit 324 395 2.0E-8 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Tph_c16300 ce4c9c2305a6832505f30bd9acc298c7 415 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 9 398 2.4E-139 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Tph_c16300 ce4c9c2305a6832505f30bd9acc298c7 415 Pfam PF13742 OB-fold nucleic acid binding domain 7 101 6.2E-28 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Tph_c10840 6ad96bcf94561914cbfba3f885170713 254 Pfam PF02108 Flagellar assembly protein FliH 120 243 7.5E-17 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Tph_c03700 e7368138d9c5b3533446cea9545ccc53 169 Gene3D G3DSA:4.10.860.10 130 169 9.7E-6 T 14-10-2018 Tph_c03700 e7368138d9c5b3533446cea9545ccc53 169 PIRSF PIRSF015034 2 169 4.4E-60 T 14-10-2018 IPR025542 YacH protein Tph_c03700 e7368138d9c5b3533446cea9545ccc53 169 SUPERFAMILY SSF46600 132 166 5.1E-7 T 14-10-2018 IPR036876 UVR domain superfamily Tph_c03700 e7368138d9c5b3533446cea9545ccc53 169 Pfam PF02151 UvrB/uvrC motif 133 166 5.2E-11 T 14-10-2018 IPR001943 UVR domain GO:0005515 Tph_c04120 9cf9f8bd336898bcce4058fcb4f19339 174 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 113 161 1.4E-7 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 Tph_c04120 9cf9f8bd336898bcce4058fcb4f19339 174 Hamap MF_01515 UPF0316 protein . 5 173 25.545 T 14-10-2018 IPR022930 Protein of unknown function UPF0316 Tph_c03900 84fb7228052f4eacde393b6f0e0dc09d 233 Pfam PF04012 PspA/IM30 family 2 229 3.6E-30 T 14-10-2018 IPR007157 PspA/IM30 Tph_c23440 e6341d400616de6a16147b649d708e3d 285 SUPERFAMILY SSF54862 51 113 2.64E-18 T 14-10-2018 Tph_c23440 e6341d400616de6a16147b649d708e3d 285 Pfam PF13187 4Fe-4S dicluster domain 66 109 1.9E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Tph_c23440 e6341d400616de6a16147b649d708e3d 285 Gene3D G3DSA:3.30.70.20 58 114 2.0E-11 T 14-10-2018 Tph_c23440 e6341d400616de6a16147b649d708e3d 285 SUPERFAMILY SSF52540 1 273 2.26E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c23440 e6341d400616de6a16147b649d708e3d 285 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 249 2.4E-13 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Tph_c23440 e6341d400616de6a16147b649d708e3d 285 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 95 106 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Tph_c20920 a942a6c6d1cb6c973e9eb4695e259c66 67 Pfam PF11007 Spore coat associated protein JA (CotJA) 26 59 5.8E-15 T 14-10-2018 IPR020256 Spore coat protein CotJA Tph_c23620 fdba6e605d2a33407ddd543bd9120c32 176 Pfam PF09851 Short C-terminal domain 141 167 0.0092 T 14-10-2018 IPR018649 SHOCT domain Tph_c23620 fdba6e605d2a33407ddd543bd9120c32 176 Pfam PF09851 Short C-terminal domain 46 64 0.0041 T 14-10-2018 IPR018649 SHOCT domain Tph_c23620 fdba6e605d2a33407ddd543bd9120c32 176 SUPERFAMILY SSF47473 55 164 1.04E-5 T 14-10-2018 IPR011992 EF-hand domain pair Tph_c23540 826a09ece812d65d5c54d9b3bb7c9233 132 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 11 128 4.2E-42 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Tph_c23540 826a09ece812d65d5c54d9b3bb7c9233 132 SUPERFAMILY SSF81593 3 126 6.67E-42 T 14-10-2018 Tph_c23540 826a09ece812d65d5c54d9b3bb7c9233 132 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 11 120 6.3E-39 T 14-10-2018 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 Tph_c23540 826a09ece812d65d5c54d9b3bb7c9233 132 Gene3D G3DSA:1.20.120.330 11 130 4.8E-42 T 14-10-2018 Tph_c01030 d2ef3ece5d0ec907f21034b4b449021c 124 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 98 1.9E-18 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tph_c01030 d2ef3ece5d0ec907f21034b4b449021c 124 SUPERFAMILY SSF53146 1 118 2.75E-30 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c01030 d2ef3ece5d0ec907f21034b4b449021c 124 Gene3D G3DSA:3.30.420.130 1 109 1.0E-26 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c17210 1960608f587d87f79faed057c9b51933 128 Pfam PF01597 Glycine cleavage H-protein 8 125 6.3E-42 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Tph_c17210 1960608f587d87f79faed057c9b51933 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 5 125 6.0E-42 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Tph_c17210 1960608f587d87f79faed057c9b51933 128 Gene3D G3DSA:2.40.50.100 1 128 1.9E-48 T 14-10-2018 Tph_c17210 1960608f587d87f79faed057c9b51933 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 124 37.535 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Tph_c17210 1960608f587d87f79faed057c9b51933 128 SUPERFAMILY SSF51230 2 125 9.29E-41 T 14-10-2018 IPR011053 Single hybrid motif Tph_c17210 1960608f587d87f79faed057c9b51933 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Tph_c05100 5d662c5e5f111524dddaaa0ca88b63a9 85 Pfam PF13466 STAS domain 10 62 2.2E-9 T 14-10-2018 IPR002645 STAS domain Tph_c05100 5d662c5e5f111524dddaaa0ca88b63a9 85 SUPERFAMILY SSF52091 9 66 4.71E-7 T 14-10-2018 IPR036513 STAS domain superfamily Tph_c10680 f6c3c39bf686e91b3ba9bc1268d859ef 299 SUPERFAMILY SSF52540 2 218 1.54E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c10680 f6c3c39bf686e91b3ba9bc1268d859ef 299 Gene3D G3DSA:3.40.50.300 1 226 7.9E-49 T 14-10-2018 Tph_c10680 f6c3c39bf686e91b3ba9bc1268d859ef 299 Pfam PF00005 ABC transporter 18 154 7.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c10680 f6c3c39bf686e91b3ba9bc1268d859ef 299 SMART SM00382 26 203 3.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c22520 c9b78eadb140072b8d329b5430709b0f 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 13 102 1.7E-21 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tph_c22520 c9b78eadb140072b8d329b5430709b0f 122 Gene3D G3DSA:3.30.420.130 1 113 1.6E-30 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c22520 c9b78eadb140072b8d329b5430709b0f 122 SUPERFAMILY SSF53146 2 117 4.32E-28 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c03530 c2cd75b88186e9ad5921cace9ec5a628 332 Gene3D G3DSA:1.10.3720.10 108 319 1.7E-25 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c03530 c2cd75b88186e9ad5921cace9ec5a628 332 SUPERFAMILY SSF161098 114 313 1.64E-19 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c03530 c2cd75b88186e9ad5921cace9ec5a628 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 328 3.3E-44 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c22710 14537be86e17057094ab49c5458e34c9 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 13 113 2.2E-31 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Tph_c22710 14537be86e17057094ab49c5458e34c9 121 Gene3D G3DSA:1.10.3830.10 1 118 8.1E-35 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Tph_c22710 14537be86e17057094ab49c5458e34c9 121 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 66 77 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 Tph_c06330 ddbe86b15c6d5187049f99920ba88b3c 337 Pfam PF13817 IS66 C-terminal element 286 326 5.0E-16 T 14-10-2018 IPR039552 Transposase IS66, C-terminal Tph_c06330 ddbe86b15c6d5187049f99920ba88b3c 337 Pfam PF03050 Transposase IS66 family 1 280 3.9E-99 T 14-10-2018 IPR004291 Transposase, IS66 Tph_c07540 b10c23bcf4222a57f66293d9d93bee84 293 SUPERFAMILY SSF53067 1 144 1.55E-16 T 14-10-2018 Tph_c07540 b10c23bcf4222a57f66293d9d93bee84 293 SUPERFAMILY SSF53067 152 291 3.24E-14 T 14-10-2018 Tph_c07540 b10c23bcf4222a57f66293d9d93bee84 293 Gene3D G3DSA:3.30.420.40 38 288 9.2E-31 T 14-10-2018 Tph_c07540 b10c23bcf4222a57f66293d9d93bee84 293 Gene3D G3DSA:3.30.420.40 149 277 9.2E-31 T 14-10-2018 Tph_c07540 b10c23bcf4222a57f66293d9d93bee84 293 Pfam PF06406 StbA protein 72 270 1.6E-5 T 14-10-2018 IPR009440 Plasmid segregation protein ParM/StbA Tph_c24440 5c249a9ab0b5c32f7131a4d63a2f710a 141 Pfam PF09484 CRISPR-associated protein TM1802 (cas_TM1802) 4 116 8.9E-15 T 14-10-2018 IPR013389 CRISPR-associated protein Cas8b Tph_c09060 4581865c5eaab8cf0d9650aab3e5358b 543 PIRSF PIRSF005690 32 525 4.2E-167 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Tph_c09060 4581865c5eaab8cf0d9650aab3e5358b 543 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 48 510 1.5E-174 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 Tph_c11490 7662b20d56c7f3821274c68053e7886f 244 Pfam PF00574 Clp protease 48 220 2.2E-31 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tph_c11490 7662b20d56c7f3821274c68053e7886f 244 Gene3D G3DSA:3.90.226.10 47 221 5.2E-30 T 14-10-2018 Tph_c11490 7662b20d56c7f3821274c68053e7886f 244 SUPERFAMILY SSF52096 34 228 4.48E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c03290 4035d801f8f4bb55b2433b5f9c4830be 115 PIRSF PIRSF033490 2 113 8.1E-38 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c03290 4035d801f8f4bb55b2433b5f9c4830be 115 Gene3D G3DSA:2.30.30.110 2 115 1.9E-39 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor Tph_c03290 4035d801f8f4bb55b2433b5f9c4830be 115 SUPERFAMILY SSF50118 4 113 6.32E-36 T 14-10-2018 Tph_c03290 4035d801f8f4bb55b2433b5f9c4830be 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 5 110 7.0E-31 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 Tph_c22570 cc2323770340aa962da4691c27fbd05e 147 Gene3D G3DSA:2.40.33.20 2 147 3.7E-25 T 14-10-2018 Tph_c22570 cc2323770340aa962da4691c27fbd05e 147 SUPERFAMILY SSF50800 3 145 3.19E-26 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 SUPERFAMILY SSF51735 3 314 3.26E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 Gene3D G3DSA:3.40.50.720 5 299 5.0E-103 T 14-10-2018 Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 245 4.8E-59 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 Gene3D G3DSA:3.90.25.10 180 311 5.0E-103 T 14-10-2018 Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 PRINTS PR01713 Nucleotide sugar epimerase signature 30 46 4.0E-17 T 14-10-2018 Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 PRINTS PR01713 Nucleotide sugar epimerase signature 239 254 4.0E-17 T 14-10-2018 Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 4.0E-17 T 14-10-2018 Tph_c02700 73b716cef341ac953e3bec29bfdcf7db 316 PRINTS PR01713 Nucleotide sugar epimerase signature 278 295 4.0E-17 T 14-10-2018 Tph_c12340 d0b8aa85fbd6b2b72c7382373b25151e 206 SMART SM00793 3 196 5.5E-7 T 14-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Tph_c12340 d0b8aa85fbd6b2b72c7382373b25151e 206 Pfam PF04647 Accessory gene regulator B 8 187 1.1E-38 T 14-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 Gene3D G3DSA:3.40.50.280 74 208 1.9E-47 T 14-10-2018 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 SUPERFAMILY SSF47644 5 79 3.53E-14 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 Pfam PF02310 B12 binding domain 88 192 2.5E-23 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 Gene3D G3DSA:1.10.1240.10 3 73 1.0E-19 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 Pfam PF02607 B12 binding domain 5 70 1.7E-10 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 SUPERFAMILY SSF52242 68 207 5.63E-43 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Tph_c28010 931f37b5d06a31ecfad8c1f3fdf37383 209 SMART SM01018 1 81 7.7E-13 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c09700 9137f8be125e73888884e35d02c462de 160 Pfam PF11181 Heat induced stress protein YflT 7 133 2.9E-8 T 14-10-2018 IPR025889 General stress protein 17M-like domain Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 SUPERFAMILY SSF51735 5 179 4.96E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 Gene3D G3DSA:1.10.1040.10 190 336 1.5E-50 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 SUPERFAMILY SSF48179 181 332 5.95E-55 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 161 4.3E-50 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PIRSF PIRSF000114 1 333 3.8E-104 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 Gene3D G3DSA:3.40.50.720 1 188 1.0E-62 T 14-10-2018 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 3.2E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 3.2E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 3.2E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 7 24 3.2E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 3.2E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 57 84 3.2E-43 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 3 323 37.585 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c15580 8720addbb965ff622ae6e7bf698969b1 343 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 8.5E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 Tph_c28810 06e68ea003974ede3fbdd152fba18d0f 73 Pfam PF10764 Inhibitor of sigma-G Gin 20 68 4.6E-15 T 14-10-2018 IPR019700 Anti-sigma-G factor Gin Tph_c11830 8a8b5881006614bccd3efb3f855918a9 176 Pfam PF02371 Transposase IS116/IS110/IS902 family 40 124 2.4E-14 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c18700 3440a557e81e24c7e336c2804c81e777 455 Pfam PF12913 SH3 domain (SH3b1 type) 151 193 5.4E-15 T 14-10-2018 IPR039439 SH3b1 domain Tph_c18700 3440a557e81e24c7e336c2804c81e777 455 Pfam PF00877 NlpC/P60 family 314 394 2.5E-11 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Tph_c18700 3440a557e81e24c7e336c2804c81e777 455 Gene3D G3DSA:3.90.1720.10 287 451 1.9E-36 T 14-10-2018 Tph_c18700 3440a557e81e24c7e336c2804c81e777 455 SUPERFAMILY SSF54001 296 405 1.44E-15 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Tph_c11660 7ae587ba727cd53b5e24d6cb64a89de3 313 SMART SM00382 53 212 2.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c11660 7ae587ba727cd53b5e24d6cb64a89de3 313 Pfam PF07728 AAA domain (dynein-related subfamily) 57 205 2.1E-10 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tph_c11660 7ae587ba727cd53b5e24d6cb64a89de3 313 Gene3D G3DSA:3.40.50.300 38 224 3.8E-25 T 14-10-2018 Tph_c11660 7ae587ba727cd53b5e24d6cb64a89de3 313 SUPERFAMILY SSF52540 43 251 1.32E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c17820 6d238bb7007957c1ea00a1192eda1aef 105 Pfam PF01910 Thiamine-binding protein 11 99 4.2E-26 T 14-10-2018 IPR002767 Thiamine-binding protein Tph_c17820 6d238bb7007957c1ea00a1192eda1aef 105 SUPERFAMILY SSF89957 8 102 1.03E-27 T 14-10-2018 IPR029756 MTH1187/YkoF-like Tph_c17820 6d238bb7007957c1ea00a1192eda1aef 105 Gene3D G3DSA:3.30.70.930 4 105 1.7E-34 T 14-10-2018 IPR029756 MTH1187/YkoF-like Tph_c21210 3bc800ebd646c4773d62d23798db4c47 321 SUPERFAMILY SSF53187 146 310 5.65E-5 T 14-10-2018 Tph_c21210 3bc800ebd646c4773d62d23798db4c47 321 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 122 313 9.8E-58 T 14-10-2018 IPR010897 Sporulation stage II, protein P Tph_c21210 3bc800ebd646c4773d62d23798db4c47 321 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 117 310 2.0E-63 T 14-10-2018 IPR010897 Sporulation stage II, protein P Tph_c26470 8e50fc96fa9c8b44989885e483f33ca6 637 Pfam PF03065 Glycosyl hydrolase family 57 75 229 5.4E-8 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 Tph_c26470 8e50fc96fa9c8b44989885e483f33ca6 637 SUPERFAMILY SSF88713 1 332 1.61E-18 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 Hamap MF_01642 LL-diaminopimelate aminotransferase [dapL]. 2 385 46.054 T 14-10-2018 IPR019942 LL-diaminopimelate aminotransferase/aminotransferase ALD1 GO:0008483 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 Gene3D G3DSA:3.40.640.10 43 284 5.8E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 Pfam PF00155 Aminotransferase class I and II 32 381 7.7E-62 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 TIGRFAM TIGR03540 DapC_direct: LL-diaminopimelate aminotransferase 3 384 6.2E-187 T 14-10-2018 IPR019881 Diaminopimelate aminotransferase, DapL, Desulfovibrio-type GO:0009089|GO:0010285 KEGG: 00300+2.6.1.83|MetaCyc: PWY-5097 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 Gene3D G3DSA:3.90.1150.10 20 382 5.8E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c14370 f26ead8ded6b79ccf945f45ecefea5d4 391 SUPERFAMILY SSF53383 1 387 1.18E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c24800 519c0faf27606c8e13dd92a197f1aa05 370 Pfam PF12698 ABC-2 family transporter protein 21 361 8.4E-46 T 14-10-2018 Tph_c24800 519c0faf27606c8e13dd92a197f1aa05 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 292 311 8.3E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c24800 519c0faf27606c8e13dd92a197f1aa05 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 255 279 8.3E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c24800 519c0faf27606c8e13dd92a197f1aa05 370 PRINTS PR00164 ABC-2 type transport system membrane protein signature 312 331 8.3E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Tph_c01130 5f4229c5e963ca78fa319a6f70c67b4b 351 Pfam PF05140 ResB-like family 81 258 1.2E-30 T 14-10-2018 IPR007816 ResB-like domain Tph_c17740 e309dfb4a5d550b01c992a1cee708e4f 549 SUPERFAMILY SSF53098 176 489 2.12E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c17740 e309dfb4a5d550b01c992a1cee708e4f 549 Pfam PF01609 Transposase DDE domain 179 477 5.2E-17 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c17100 2d80693082b6d3c37fe5399a9b2f724f 337 SUPERFAMILY SSF161098 93 318 1.5E-10 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17100 2d80693082b6d3c37fe5399a9b2f724f 337 Gene3D G3DSA:1.10.3720.10 85 333 2.8E-16 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17100 2d80693082b6d3c37fe5399a9b2f724f 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 2.0E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c08130 586dd6aac665eb3b2a952920b68d7e94 394 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 67 213 1.5E-43 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Tph_c08130 586dd6aac665eb3b2a952920b68d7e94 394 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 66 213 1.3E-41 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Tph_c08130 586dd6aac665eb3b2a952920b68d7e94 394 Gene3D G3DSA:1.10.260.150 33 302 7.2E-77 T 14-10-2018 Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 304 18.795 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 175 9.1E-56 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 Gene3D G3DSA:3.30.2350.10 1 236 3.5E-87 T 14-10-2018 Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 SUPERFAMILY SSF88697 237 293 4.59E-6 T 14-10-2018 IPR015947 PUA-like superfamily Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 176 233 3.5E-14 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 SUPERFAMILY SSF55120 2 232 2.24E-76 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c11340 7f69a3130112f13c09f03954483e9fbc 311 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 213 9.5E-73 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Tph_c29120 149517280b5f1738634f1a72569714bc 340 SUPERFAMILY SSF48208 151 307 5.67E-11 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Tph_c22760 5014203a30892dee79768c106b8e0f38 93 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 12 92 1.6E-26 T 14-10-2018 IPR022477 Sporulation protein YqfC Tph_c22760 5014203a30892dee79768c106b8e0f38 93 Pfam PF07873 YabP family 28 89 7.4E-19 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC Tph_c19970 9167b5aaca1731424a13a4c554016ee6 353 Pfam PF04434 SWIM zinc finger 59 90 1.5E-7 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 Tph_c12480 0e42b497aa1fe3240e25952e6d09a243 205 SUPERFAMILY SSF56281 1 205 1.02E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c12480 0e42b497aa1fe3240e25952e6d09a243 205 Gene3D G3DSA:3.60.15.10 2 205 8.2E-68 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c12480 0e42b497aa1fe3240e25952e6d09a243 205 SMART SM00849 12 189 1.8E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c12480 0e42b497aa1fe3240e25952e6d09a243 205 Pfam PF00753 Metallo-beta-lactamase superfamily 9 177 5.1E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase Tph_c14700 019356d68687303bf6915df41faa9e6a 222 SMART SM00793 6 198 4.1E-20 T 14-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Tph_c14700 019356d68687303bf6915df41faa9e6a 222 Pfam PF04647 Accessory gene regulator B 9 189 3.4E-40 T 14-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 Tph_c07990 edd10f9744288dee1fda97cba455ee1c 190 Pfam PF01613 Flavin reductase like domain 22 120 3.6E-13 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c07990 edd10f9744288dee1fda97cba455ee1c 190 SMART SM00903 5 128 0.0019 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 Tph_c07990 edd10f9744288dee1fda97cba455ee1c 190 Gene3D G3DSA:2.30.110.10 17 141 5.9E-25 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Tph_c07990 edd10f9744288dee1fda97cba455ee1c 190 SUPERFAMILY SSF50475 33 123 1.07E-20 T 14-10-2018 Tph_c08520 52b22d8ac65b16fe21d8fc83810ebc03 219 Gene3D G3DSA:1.10.3210.10 4 161 3.8E-19 T 14-10-2018 Tph_c08520 52b22d8ac65b16fe21d8fc83810ebc03 219 SUPERFAMILY SSF109604 23 174 1.79E-23 T 14-10-2018 Tph_c08520 52b22d8ac65b16fe21d8fc83810ebc03 219 Pfam PF01966 HD domain 34 131 5.9E-10 T 14-10-2018 IPR006674 HD domain Tph_c03610 e998904bbbd65748244c271fab2a90fd 267 Pfam PF00809 Pterin binding enzyme 6 227 5.9E-32 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03610 e998904bbbd65748244c271fab2a90fd 267 Gene3D G3DSA:3.20.20.20 1 266 7.7E-101 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c03610 e998904bbbd65748244c271fab2a90fd 267 SUPERFAMILY SSF51717 1 261 9.29E-84 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c08790 085f2dc9aa608a4edbc405e8c6b5ba69 322 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 246 322 1.5E-12 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Tph_c08790 085f2dc9aa608a4edbc405e8c6b5ba69 322 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 16 322 8.2E-60 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 Tph_c08790 085f2dc9aa608a4edbc405e8c6b5ba69 322 Gene3D G3DSA:3.30.300.210 261 322 4.3E-6 T 14-10-2018 IPR038501 Spore germination GerAC superfamily Tph_c17600 1011a9fdc5ad469873710a087432439a 172 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 43 123 6.6E-20 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c17600 1011a9fdc5ad469873710a087432439a 172 Pfam PF07282 Putative transposase DNA-binding domain 97 165 1.5E-24 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c19790 6eef9bb2b770c8e75b9747e2cc7335f7 229 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 223 5.8E-31 T 14-10-2018 IPR010273 Protein of unknown function DUF881 Tph_c19790 6eef9bb2b770c8e75b9747e2cc7335f7 229 Gene3D G3DSA:3.30.70.1880 89 229 4.7E-31 T 14-10-2018 Tph_c11220 0d2fc079b059b17ee5ee4ea076d93e16 359 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 39 357 2.8E-90 T 14-10-2018 IPR014227 Putative transport protein YtvI-like Tph_c11220 0d2fc079b059b17ee5ee4ea076d93e16 359 Pfam PF01594 AI-2E family transporter 28 357 8.1E-57 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Tph_c15410 03cedbb33d3487ee34884ddb4aaabff5 198 SUPERFAMILY SSF53706 36 198 3.14E-54 T 14-10-2018 Tph_c15410 03cedbb33d3487ee34884ddb4aaabff5 198 Gene3D G3DSA:3.40.50.740 98 198 9.8E-39 T 14-10-2018 Tph_c15410 03cedbb33d3487ee34884ddb4aaabff5 198 Gene3D G3DSA:2.20.25.90 38 96 2.0E-20 T 14-10-2018 Tph_c15410 03cedbb33d3487ee34884ddb4aaabff5 198 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 94 2.8E-20 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c15410 03cedbb33d3487ee34884ddb4aaabff5 198 SMART SM00926 41 95 5.0E-21 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 Pfam PF00152 tRNA synthetases class II (D, K and N) 150 486 3.2E-85 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 SUPERFAMILY SSF55681 149 487 6.13E-122 T 14-10-2018 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 PRINTS PR00982 Lysyl-tRNA synthetase signature 231 244 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 PRINTS PR00982 Lysyl-tRNA synthetase signature 186 196 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 PRINTS PR00982 Lysyl-tRNA synthetase signature 249 266 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 PRINTS PR00982 Lysyl-tRNA synthetase signature 202 218 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 PRINTS PR00982 Lysyl-tRNA synthetase signature 371 387 1.5E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 PIRSF PIRSF039101 4 492 1.4E-194 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 13 488 3.4E-201 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 Gene3D G3DSA:2.40.50.140 11 141 2.5E-38 T 14-10-2018 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 15 492 44.924 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 Gene3D G3DSA:3.30.930.10 145 491 1.5E-134 T 14-10-2018 Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 SUPERFAMILY SSF50249 8 142 1.71E-38 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Tph_c26180 33dae1d93a40cf632aae8d5854814663 492 Pfam PF01336 OB-fold nucleic acid binding domain 56 133 4.5E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Tph_c10580 137d96ebf5b191ef4832c927e92cc2f1 173 SUPERFAMILY SSF49764 77 156 2.62E-11 T 14-10-2018 IPR008978 HSP20-like chaperone Tph_c10580 137d96ebf5b191ef4832c927e92cc2f1 173 ProDom PD016516 GVPH GAS VACUOLE VESICLE PLASMID 5 158 6.0E-4 T 14-10-2018 Tph_c10580 137d96ebf5b191ef4832c927e92cc2f1 173 Gene3D G3DSA:2.60.40.790 77 158 1.3E-9 T 14-10-2018 IPR008978 HSP20-like chaperone Tph_c06500 43e42b8098a30241301a2b5e059fb9c3 284 PIRSF PIRSF006483 1 281 5.6E-94 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Tph_c06500 43e42b8098a30241301a2b5e059fb9c3 284 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 219 273 2.3E-20 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 Tph_c06500 43e42b8098a30241301a2b5e059fb9c3 284 Gene3D G3DSA:3.30.70.120 190 266 1.6E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Tph_c06500 43e42b8098a30241301a2b5e059fb9c3 284 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 10 213 2.9E-68 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT Tph_c04760 76c1012d79d5df6a64d3ef3337fefffb 332 Gene3D G3DSA:1.20.1730.10 26 332 2.6E-39 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily Tph_c04760 76c1012d79d5df6a64d3ef3337fefffb 332 Pfam PF00474 Sodium:solute symporter family 38 331 4.6E-22 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 Tph_c16970 956b20fecf4ae8219b48a2ed196503c5 1762 SMART SM00382 1412 1698 3.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c16970 956b20fecf4ae8219b48a2ed196503c5 1762 SUPERFAMILY SSF52540 1386 1738 5.61E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16970 956b20fecf4ae8219b48a2ed196503c5 1762 Pfam PF01935 Domain of unknown function DUF87 1413 1615 9.7E-8 T 14-10-2018 IPR002789 Helicase HerA, central domain Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 SUPERFAMILY SSF52922 187 322 1.05E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 Pfam PF02780 Transketolase, C-terminal domain 193 315 4.0E-43 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 Gene3D G3DSA:3.40.50.920 192 323 6.9E-53 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 SUPERFAMILY SSF52518 2 203 1.33E-71 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 SMART SM00861 4 179 3.5E-68 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 Gene3D G3DSA:3.40.50.970 1 191 1.5E-90 T 14-10-2018 Tph_c19640 b57dad2c1bb9073c98b80bdec4d95554 323 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 3.3E-53 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Tph_c23150 d1d3da4a062748b99cb185a57b25b682 241 Pfam PF00574 Clp protease 50 186 1.6E-32 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Tph_c23150 d1d3da4a062748b99cb185a57b25b682 241 SUPERFAMILY SSF52096 13 190 8.95E-49 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Tph_c23150 d1d3da4a062748b99cb185a57b25b682 241 Gene3D G3DSA:3.90.226.10 19 197 1.5E-47 T 14-10-2018 Tph_c23150 d1d3da4a062748b99cb185a57b25b682 241 PRINTS PR00127 Clp protease catalytic subunit P signature 164 183 3.9E-9 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c23150 d1d3da4a062748b99cb185a57b25b682 241 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 3.9E-9 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c23150 d1d3da4a062748b99cb185a57b25b682 241 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 3.9E-9 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Tph_c14830 8f2d5396fbe5a8443866e00a10885e14 181 SUPERFAMILY SSF53098 35 140 6.22E-18 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c18050 cdd9dc2f73d1d53988aabef7d762677c 188 Pfam PF01464 Transglycosylase SLT domain 46 157 2.6E-29 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Tph_c18050 cdd9dc2f73d1d53988aabef7d762677c 188 Gene3D G3DSA:1.10.530.10 35 188 2.3E-48 T 14-10-2018 Tph_c18050 cdd9dc2f73d1d53988aabef7d762677c 188 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 61 89 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Tph_c18050 cdd9dc2f73d1d53988aabef7d762677c 188 SUPERFAMILY SSF53955 39 187 2.76E-46 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Tph_c24810 9285979581ef7faefd56151d6f050a21 307 Pfam PF00005 ABC transporter 21 164 4.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c24810 9285979581ef7faefd56151d6f050a21 307 SUPERFAMILY SSF52540 3 224 2.33E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c24810 9285979581ef7faefd56151d6f050a21 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c24810 9285979581ef7faefd56151d6f050a21 307 Gene3D G3DSA:3.40.50.300 2 230 5.0E-65 T 14-10-2018 Tph_c24810 9285979581ef7faefd56151d6f050a21 307 SMART SM00382 29 210 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c16160 f7a9598c65f584cdcb44a4798013c4c0 281 Pfam PF00953 Glycosyl transferase family 4 70 223 3.7E-7 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tph_c27690 fa06e2d680340d03c420204241dc6ab9 328 Gene3D G3DSA:3.20.20.480 21 328 2.2E-105 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c27690 fa06e2d680340d03c420204241dc6ab9 328 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 17 327 2.5E-60 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c01350 00561be72ccb73f989876e4076d170e4 566 SUPERFAMILY SSF53098 263 509 1.14E-11 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c01350 00561be72ccb73f989876e4076d170e4 566 Pfam PF01609 Transposase DDE domain 251 496 4.3E-13 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c27450 8ba49e03f0a46c85ae2b65e753033d10 84 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 14 68 3.7E-15 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter Tph_c02610 08453ccc8a83ab5b58b130ac2e4e1854 176 Gene3D G3DSA:3.30.460.10 9 114 3.1E-9 T 14-10-2018 Tph_c02610 08453ccc8a83ab5b58b130ac2e4e1854 176 SUPERFAMILY SSF81301 7 116 1.25E-11 T 14-10-2018 Tph_c26660 028cfe08ab710d48ed434d5292f418d4 138 Pfam PF13350 Tyrosine phosphatase family 94 134 2.0E-8 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Tph_c26660 028cfe08ab710d48ed434d5292f418d4 138 Gene3D G3DSA:3.90.190.10 4 137 1.1E-12 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Tph_c26660 028cfe08ab710d48ed434d5292f418d4 138 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 113 123 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Tph_c26660 028cfe08ab710d48ed434d5292f418d4 138 SUPERFAMILY SSF52799 4 136 3.82E-14 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Tph_c02560 482bd05635274dd375686092a555cd45 257 Pfam PF06114 IrrE N-terminal-like domain 28 151 1.0E-17 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Tph_c17520 aed324a0145a53f916ad16d1dbd920e9 413 Gene3D G3DSA:2.120.10.30 106 406 2.1E-15 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like Tph_c17520 aed324a0145a53f916ad16d1dbd920e9 413 SUPERFAMILY SSF82171 93 404 4.32E-24 T 14-10-2018 Tph_c09470 e5e17bb3ac94a7b460067b0025f59372 212 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 205 2.7E-69 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 Tph_c09470 e5e17bb3ac94a7b460067b0025f59372 212 Gene3D G3DSA:1.10.1760.20 1 204 2.0E-72 T 14-10-2018 Tph_c23980 6c0d1ea17cd4cde48fbf9ae022101313 224 SUPERFAMILY SSF89562 18 185 3.14E-44 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Tph_c23980 6c0d1ea17cd4cde48fbf9ae022101313 224 Gene3D G3DSA:3.50.30.100 1 197 5.5E-64 T 14-10-2018 Tph_c23980 6c0d1ea17cd4cde48fbf9ae022101313 224 Pfam PF03737 Aldolase/RraA 21 174 1.7E-39 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Tph_c12230 de4ee85de7fc93988c7f122b246726e4 98 Pfam PF01527 Transposase 3 74 3.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c12230 de4ee85de7fc93988c7f122b246726e4 98 SUPERFAMILY SSF46689 4 94 1.45E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c02810 35099b5a879dffbcad9df226231a10fc 375 SUPERFAMILY SSF53756 6 371 1.47E-78 T 14-10-2018 Tph_c02810 35099b5a879dffbcad9df226231a10fc 375 Gene3D G3DSA:3.40.50.2000 25 370 6.7E-79 T 14-10-2018 Tph_c02810 35099b5a879dffbcad9df226231a10fc 375 Pfam PF00534 Glycosyl transferases group 1 191 352 3.4E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c02810 35099b5a879dffbcad9df226231a10fc 375 Gene3D G3DSA:3.40.50.2000 176 357 6.7E-79 T 14-10-2018 Tph_c02810 35099b5a879dffbcad9df226231a10fc 375 Pfam PF13579 Glycosyl transferase 4-like domain 27 166 5.1E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c21520 bd516843016f97af07721fd24cb32644 115 Pfam PF02410 Ribosomal silencing factor during starvation 12 105 2.1E-27 T 14-10-2018 Tph_c21520 bd516843016f97af07721fd24cb32644 115 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 11 105 3.3E-31 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Tph_c21520 bd516843016f97af07721fd24cb32644 115 SUPERFAMILY SSF81301 6 111 5.72E-36 T 14-10-2018 Tph_c21520 bd516843016f97af07721fd24cb32644 115 Gene3D G3DSA:3.30.460.10 2 108 2.6E-36 T 14-10-2018 Tph_c21520 bd516843016f97af07721fd24cb32644 115 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 106 22.579 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Tph_c06860 556ed666d7c5a4405cb5a215f2094d72 94 SUPERFAMILY SSF46785 6 89 2.47E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c06860 556ed666d7c5a4405cb5a215f2094d72 94 Gene3D G3DSA:1.10.10.10 1 91 1.1E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c20300 41339a4565c41d58011336db3096311c 483 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 12 480 7.3E-88 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c20300 41339a4565c41d58011336db3096311c 483 Gene3D G3DSA:3.20.20.480 5 481 9.2E-156 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c05790 f919977190c0087626262c4d6963fcdc 273 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 267 61.187 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein Tph_c05790 f919977190c0087626262c4d6963fcdc 273 Pfam PF03618 Kinase/pyrophosphorylase 6 262 3.5E-100 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 Tph_c16140 4604d6f357917dbdc86fa745f41ccdd6 357 Pfam PF12982 Protein of unknown function (DUF3866) 32 350 1.0E-134 T 14-10-2018 IPR024479 Protein of unknown function DUF3866 Tph_c09660 b5d9ad7c903513f50ef918c06f3b4c3d 394 Gene3D G3DSA:1.20.1270.370 165 206 8.6E-12 T 14-10-2018 Tph_c09660 b5d9ad7c903513f50ef918c06f3b4c3d 394 Gene3D G3DSA:3.40.50.11890 34 164 8.6E-12 T 14-10-2018 Tph_c09660 b5d9ad7c903513f50ef918c06f3b4c3d 394 Gene3D G3DSA:3.40.50.11900 257 391 6.8E-15 T 14-10-2018 Tph_c09660 b5d9ad7c903513f50ef918c06f3b4c3d 394 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 38 386 3.3E-58 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit Tph_c16000 bfaca2f42bc04c3eca36c051c71c10ab 156 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 18 154 3.2E-53 T 14-10-2018 IPR014203 Sporulation stage V, protein AC Tph_c16000 bfaca2f42bc04c3eca36c051c71c10ab 156 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 35 151 2.6E-38 T 14-10-2018 IPR005562 SpoVA Tph_c22300 2c2e6fb3c3347e1a3103f91c60ed2e77 169 Pfam PF07486 Cell Wall Hydrolase 70 167 4.3E-26 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 Tph_c22300 2c2e6fb3c3347e1a3103f91c60ed2e77 169 Gene3D G3DSA:1.10.10.2520 53 133 1.8E-27 T 14-10-2018 Tph_c22300 2c2e6fb3c3347e1a3103f91c60ed2e77 169 Gene3D G3DSA:2.40.10.420 134 168 6.5E-18 T 14-10-2018 Tph_c19610 595c10ff7a965bc02338babdffa0b583 114 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 90 4.4E-14 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Tph_c19610 595c10ff7a965bc02338babdffa0b583 114 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 105 2.1E-21 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Tph_c19610 595c10ff7a965bc02338babdffa0b583 114 SUPERFAMILY SSF69118 5 112 1.31E-27 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tph_c19610 595c10ff7a965bc02338babdffa0b583 114 Gene3D G3DSA:1.20.1290.10 1 114 4.2E-32 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Tph_c16330 66854b0255ae70ab15847f2cfdbf56eb 138 Pfam PF01029 NusB family 4 130 5.4E-39 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Tph_c16330 66854b0255ae70ab15847f2cfdbf56eb 138 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 133 22.951 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Tph_c16330 66854b0255ae70ab15847f2cfdbf56eb 138 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 131 5.7E-43 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Tph_c16330 66854b0255ae70ab15847f2cfdbf56eb 138 Gene3D G3DSA:1.10.940.10 1 136 3.2E-45 T 14-10-2018 IPR035926 NusB-like superfamily Tph_c16330 66854b0255ae70ab15847f2cfdbf56eb 138 SUPERFAMILY SSF48013 2 133 2.75E-42 T 14-10-2018 IPR035926 NusB-like superfamily Tph_c25770 72297a2fe580bc9eec27113f6e94d209 77 Pfam PF00831 Ribosomal L29 protein 5 61 1.2E-25 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25770 72297a2fe580bc9eec27113f6e94d209 77 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 17.882 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25770 72297a2fe580bc9eec27113f6e94d209 77 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 4.5E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25770 72297a2fe580bc9eec27113f6e94d209 77 SUPERFAMILY SSF46561 3 62 3.79E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Tph_c25770 72297a2fe580bc9eec27113f6e94d209 77 Gene3D G3DSA:1.10.287.310 3 69 8.7E-27 T 14-10-2018 Tph_c19290 b45cd926501d672777481a0c39ceaba8 395 Gene3D G3DSA:3.30.420.10 105 270 1.8E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Tph_c19290 b45cd926501d672777481a0c39ceaba8 395 SUPERFAMILY SSF53098 106 269 3.19E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c19290 b45cd926501d672777481a0c39ceaba8 395 Pfam PF00665 Integrase core domain 104 230 1.0E-23 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Tph_c14900 dfb5363b530bbf32b63f65bfd57076e4 313 SUPERFAMILY SSF52540 17 250 1.47E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14900 dfb5363b530bbf32b63f65bfd57076e4 313 Pfam PF07728 AAA domain (dynein-related subfamily) 38 186 4.8E-12 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Tph_c14900 dfb5363b530bbf32b63f65bfd57076e4 313 SMART SM00382 34 192 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c14900 dfb5363b530bbf32b63f65bfd57076e4 313 Gene3D G3DSA:3.40.50.300 19 204 6.4E-31 T 14-10-2018 Tph_c18060 cf51974d26f6653512fa3f8be9fddaf6 209 SUPERFAMILY SSF52540 4 196 4.49E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c18060 cf51974d26f6653512fa3f8be9fddaf6 209 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 191 2.6E-57 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tph_c18060 cf51974d26f6653512fa3f8be9fddaf6 209 Gene3D G3DSA:3.40.50.300 2 207 1.0E-83 T 14-10-2018 Tph_c18060 cf51974d26f6653512fa3f8be9fddaf6 209 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 200 30.143 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tph_c18060 cf51974d26f6653512fa3f8be9fddaf6 209 Pfam PF01121 Dephospho-CoA kinase 4 182 1.1E-60 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Tph_c06390 65e8a6cb6d9429fd7922ec4f70d75174 242 SUPERFAMILY SSF53187 2 180 1.76E-54 T 14-10-2018 Tph_c06390 65e8a6cb6d9429fd7922ec4f70d75174 242 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 173 3.0E-51 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tph_c06390 65e8a6cb6d9429fd7922ec4f70d75174 242 SMART SM00646 67 176 8.6E-44 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 Tph_c06390 65e8a6cb6d9429fd7922ec4f70d75174 242 Gene3D G3DSA:3.40.630.40 1 182 1.8E-57 T 14-10-2018 Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 SUPERFAMILY SSF100950 2 338 4.81E-115 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 Pfam PF01008 Initiation factor 2 subunit family 43 332 1.2E-79 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 Gene3D G3DSA:1.20.120.420 1 147 1.2E-39 T 14-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 Gene3D G3DSA:3.40.50.10470 148 345 9.1E-68 T 14-10-2018 Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 4 331 1.3E-125 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 2 342 37.54 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tph_c10190 fbed25aec0e396a6738348f4bd89ace9 347 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 28 332 3.6E-108 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 Tph_c24500 0f93c8a26a9de537e3f83ad3908fc368 313 Pfam PF03787 RAMP superfamily 61 227 1.4E-25 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein Tph_c13010 9bdfec668accad358c7f78d480f814cf 524 SUPERFAMILY SSF51395 96 515 3.11E-43 T 14-10-2018 Tph_c13010 9bdfec668accad358c7f78d480f814cf 524 Pfam PF01645 Conserved region in glutamate synthase 277 408 4.2E-9 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Tph_c13010 9bdfec668accad358c7f78d480f814cf 524 Gene3D G3DSA:3.20.20.70 102 518 4.3E-36 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c18320 783a69fad392622015d261ddb6f0b5a4 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 280 6.3E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tph_c10000 0b8588e57ad9b063b7eb4b2accb677f9 80 Gene3D G3DSA:1.10.8.910 8 75 4.0E-22 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily Tph_c10000 0b8588e57ad9b063b7eb4b2accb677f9 80 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 68 2.8E-25 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Tph_c12240 2f5527952802cab8ea9841b0256a2c09 404 Pfam PF01548 Transposase 9 151 9.0E-34 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c12240 2f5527952802cab8ea9841b0256a2c09 404 Pfam PF02371 Transposase IS116/IS110/IS902 family 249 334 2.0E-22 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c19960 450c64f75c1e6ee9698e6fe6ab5e3b4d 297 Gene3D G3DSA:1.25.40.10 47 241 2.3E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c19960 450c64f75c1e6ee9698e6fe6ab5e3b4d 297 SUPERFAMILY SSF48452 138 232 1.6E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c19960 450c64f75c1e6ee9698e6fe6ab5e3b4d 297 Pfam PF04184 ST7 protein 45 264 2.2E-9 T 14-10-2018 IPR007311 ST7 Tph_c22450 221f42410b0efe246c6e3bbaaa405058 146 SUPERFAMILY SSF49764 29 144 1.79E-33 T 14-10-2018 IPR008978 HSP20-like chaperone Tph_c22450 221f42410b0efe246c6e3bbaaa405058 146 Pfam PF00011 Hsp20/alpha crystallin family 45 143 2.3E-18 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Tph_c22450 221f42410b0efe246c6e3bbaaa405058 146 Gene3D G3DSA:2.60.40.790 1 145 4.7E-33 T 14-10-2018 IPR008978 HSP20-like chaperone Tph_c26970 e553fa8ac703cc3aaa7fe8f62afb22ef 75 Pfam PF08281 Sigma-70, region 4 9 52 1.6E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Tph_c26970 e553fa8ac703cc3aaa7fe8f62afb22ef 75 Gene3D G3DSA:1.10.10.10 6 56 2.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c26970 e553fa8ac703cc3aaa7fe8f62afb22ef 75 ProSitePatterns PS00622 LuxR-type HTH domain signature. 25 52 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Tph_c26970 e553fa8ac703cc3aaa7fe8f62afb22ef 75 SUPERFAMILY SSF46894 6 52 8.5E-9 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Tph_c27240 cc7c3b27b6973b63b68c1f7177918941 134 SUPERFAMILY SSF55811 5 133 5.15E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tph_c27240 cc7c3b27b6973b63b68c1f7177918941 134 Pfam PF00293 NUDIX domain 6 120 7.5E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tph_c27240 cc7c3b27b6973b63b68c1f7177918941 134 Gene3D G3DSA:3.90.79.10 1 126 6.7E-18 T 14-10-2018 Tph_c24040 5cdb4af328786cce8c56d8e9016ae4ab 136 Pfam PF05168 HEPN domain 8 130 1.2E-22 T 14-10-2018 IPR007842 HEPN domain Tph_c24040 5cdb4af328786cce8c56d8e9016ae4ab 136 Gene3D G3DSA:1.20.120.330 2 135 1.3E-21 T 14-10-2018 Tph_c24040 5cdb4af328786cce8c56d8e9016ae4ab 136 SUPERFAMILY SSF81593 10 131 4.71E-11 T 14-10-2018 Tph_c24040 5cdb4af328786cce8c56d8e9016ae4ab 136 SMART SM00748 11 126 3.7E-4 T 14-10-2018 IPR007842 HEPN domain Tph_c21860 5d4f393b7c2f7d6addb2a15c88aa119f 68 SMART SM00530 4 59 1.5E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c21860 5d4f393b7c2f7d6addb2a15c88aa119f 68 Pfam PF01381 Helix-turn-helix 5 59 2.7E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c21860 5d4f393b7c2f7d6addb2a15c88aa119f 68 Gene3D G3DSA:1.10.260.40 1 64 1.3E-27 T 14-10-2018 Tph_c21860 5d4f393b7c2f7d6addb2a15c88aa119f 68 SUPERFAMILY SSF47413 2 65 2.82E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c24820 c10ef1012dd8d6c33c437288c3305ab5 304 SMART SM00382 26 206 3.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c24820 c10ef1012dd8d6c33c437288c3305ab5 304 SUPERFAMILY SSF52540 2 221 7.52E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c24820 c10ef1012dd8d6c33c437288c3305ab5 304 Gene3D G3DSA:3.40.50.300 1 228 1.8E-64 T 14-10-2018 Tph_c24820 c10ef1012dd8d6c33c437288c3305ab5 304 Pfam PF00005 ABC transporter 18 159 5.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 Gene3D G3DSA:1.20.5.1150 16 54 9.7E-20 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 2.0E-7 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 9.4E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 9.4E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 9.4E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 9.4E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.627 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.4E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c22780 2390cb6126004cd80e8df10b3c4db6e8 58 Pfam PF01165 Ribosomal protein S21 3 56 1.7E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c23120 911583aa3ba2770334afaf5809a0edb8 111 Gene3D G3DSA:2.40.10.270 1 108 6.9E-6 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily Tph_c23120 911583aa3ba2770334afaf5809a0edb8 111 Pfam PF05521 Phage head-tail joining protein 8 103 4.7E-13 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor Tph_c02090 eee9981de8cf0df705025bf266d6415c 98 SUPERFAMILY SSF52540 7 90 8.15E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c02090 eee9981de8cf0df705025bf266d6415c 98 Gene3D G3DSA:3.40.50.300 7 95 1.7E-12 T 14-10-2018 Tph_c01720 9399a772c1401885b21e4f321ed8f7f1 112 Gene3D G3DSA:3.30.70.20 1 110 8.4E-22 T 14-10-2018 Tph_c01720 9399a772c1401885b21e4f321ed8f7f1 112 SUPERFAMILY SSF54862 1 106 9.34E-24 T 14-10-2018 Tph_c16410 122bee471d3cdd478d4b42127b2b7656 210 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 204 6.0E-38 T 14-10-2018 IPR014245 Sporulation stage III, protein AF Tph_c03510 a0b2d55551fc33b450fad8a72cfa1fdb 295 Gene3D G3DSA:3.40.50.11590 139 263 4.0E-21 T 14-10-2018 Tph_c03510 a0b2d55551fc33b450fad8a72cfa1fdb 295 Pfam PF04016 Putative heavy-metal chelation 142 256 1.0E-22 T 14-10-2018 IPR007161 Putative heavy-metal chelation domain Tph_c03510 a0b2d55551fc33b450fad8a72cfa1fdb 295 SUPERFAMILY SSF159713 32 290 3.79E-43 T 14-10-2018 Tph_c15040 621267e3ca752a44f14fadaf931ec49a 261 Pfam PF01695 IstB-like ATP binding protein 100 232 6.0E-16 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Tph_c15040 621267e3ca752a44f14fadaf931ec49a 261 SUPERFAMILY SSF52540 65 239 3.46E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c15040 621267e3ca752a44f14fadaf931ec49a 261 Gene3D G3DSA:3.40.50.300 66 261 1.7E-46 T 14-10-2018 Tph_c15040 621267e3ca752a44f14fadaf931ec49a 261 SMART SM00382 106 245 7.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c11670 3a885d7846e699dcf78ba7ffdb3b8ac2 441 Pfam PF05762 VWA domain containing CoxE-like protein 221 411 3.2E-34 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like Tph_c11670 3a885d7846e699dcf78ba7ffdb3b8ac2 441 SUPERFAMILY SSF53300 274 389 6.9E-7 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tph_c22880 992116dea9ec9cd9c0a6c40176369f8b 170 Gene3D G3DSA:3.40.50.450 8 167 5.8E-40 T 14-10-2018 Tph_c22880 992116dea9ec9cd9c0a6c40176369f8b 170 TIGRFAM TIGR00725 TIGR00725: TIGR00725 family protein 12 137 1.1E-37 T 14-10-2018 IPR005268 Conserved hypothetical protein CHP00725 Tph_c22880 992116dea9ec9cd9c0a6c40176369f8b 170 SUPERFAMILY SSF102405 11 166 4.43E-33 T 14-10-2018 Tph_c20360 b88c78756f4e96cfa37607297a82dc36 301 SUPERFAMILY SSF103481 56 157 1.96E-14 T 14-10-2018 Tph_c20360 b88c78756f4e96cfa37607297a82dc36 301 SUPERFAMILY SSF103481 202 298 5.23E-10 T 14-10-2018 Tph_c20360 b88c78756f4e96cfa37607297a82dc36 301 Pfam PF00892 EamA-like transporter family 20 154 5.9E-18 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c20360 b88c78756f4e96cfa37607297a82dc36 301 Pfam PF00892 EamA-like transporter family 164 296 2.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Tph_c09220 e5b9a81042616a60f7194eafb3d1589a 249 Pfam PF02517 CAAX protease self-immunity 151 236 2.5E-18 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Tph_c13450 8ae32227e92a9c3cd76a9759a7ee9546 218 Pfam PF02586 SOS response associated peptidase (SRAP) 1 199 5.5E-59 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) Tph_c13450 8ae32227e92a9c3cd76a9759a7ee9546 218 SUPERFAMILY SSF143081 2 197 2.62E-65 T 14-10-2018 IPR036590 SOS response associated peptidase-like Tph_c13450 8ae32227e92a9c3cd76a9759a7ee9546 218 Gene3D G3DSA:3.90.1680.10 16 210 1.3E-59 T 14-10-2018 IPR036590 SOS response associated peptidase-like Tph_c16660 572fb344b8e81f5f23fa09295ab43fc3 343 Gene3D G3DSA:3.40.50.300 103 342 4.4E-73 T 14-10-2018 Tph_c16660 572fb344b8e81f5f23fa09295ab43fc3 343 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 339 6.7E-108 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 Tph_c16660 572fb344b8e81f5f23fa09295ab43fc3 343 SUPERFAMILY SSF52540 7 338 4.32E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c16660 572fb344b8e81f5f23fa09295ab43fc3 343 Pfam PF00437 Type II/IV secretion system protein 118 243 2.4E-22 T 14-10-2018 IPR001482 Type II/IV secretion system protein Tph_c16660 572fb344b8e81f5f23fa09295ab43fc3 343 Gene3D G3DSA:3.30.450.90 1 102 1.1E-25 T 14-10-2018 Tph_c00810 d0432e8438b7641442ec098d226a20dd 142 SUPERFAMILY SSF81301 13 100 3.87E-17 T 14-10-2018 Tph_c00810 d0432e8438b7641442ec098d226a20dd 142 Pfam PF01909 Nucleotidyltransferase domain 20 91 6.4E-8 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c00810 d0432e8438b7641442ec098d226a20dd 142 Gene3D G3DSA:3.30.460.10 2 113 1.3E-16 T 14-10-2018 Tph_c00360 75abe9fddd9725e5846013fea340a98b 408 Hamap MF_01074 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein [larC]. 1 401 38.176 T 14-10-2018 IPR002822 Nickel insertion protein Tph_c00360 75abe9fddd9725e5846013fea340a98b 408 Pfam PF01969 Protein of unknown function DUF111 4 392 1.4E-126 T 14-10-2018 IPR002822 Nickel insertion protein Tph_c00360 75abe9fddd9725e5846013fea340a98b 408 Gene3D G3DSA:3.30.70.1380 248 337 1.5E-13 T 14-10-2018 Tph_c00360 75abe9fddd9725e5846013fea340a98b 408 TIGRFAM TIGR00299 TIGR00299: TIGR00299 family protein 3 392 1.5E-97 T 14-10-2018 IPR002822 Nickel insertion protein Tph_c19060 6cec4ba635e6cf20822c79b62b435018 317 Pfam PF13280 WYL domain 134 306 5.1E-47 T 14-10-2018 IPR026881 WYL domain Tph_c23660 cde4c96c8c5cca93cb752c2a758d5332 791 Pfam PF12704 MacB-like periplasmic core domain 22 236 9.8E-9 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Tph_c23660 cde4c96c8c5cca93cb752c2a758d5332 791 Pfam PF12704 MacB-like periplasmic core domain 437 634 1.1E-6 T 14-10-2018 IPR025857 MacB-like periplasmic core domain Tph_c23660 cde4c96c8c5cca93cb752c2a758d5332 791 Pfam PF02687 FtsX-like permease family 299 391 5.9E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tph_c23660 cde4c96c8c5cca93cb752c2a758d5332 791 Pfam PF02687 FtsX-like permease family 690 781 1.5E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Tph_c17040 bcd9afa6c839bd16ba783dc836f6bd14 347 SUPERFAMILY SSF144052 5 333 1.05E-22 T 14-10-2018 Tph_c06480 a7761f0f8a977d844602165d587b18a5 391 SUPERFAMILY SSF109604 61 184 2.3E-8 T 14-10-2018 Tph_c06480 a7761f0f8a977d844602165d587b18a5 391 Pfam PF01966 HD domain 65 221 1.1E-8 T 14-10-2018 IPR006674 HD domain Tph_c25040 ae39dc9955384529944a41c37eec74fb 88 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 43 7.4E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c25040 ae39dc9955384529944a41c37eec74fb 88 Gene3D G3DSA:2.10.260.10 3 44 1.3E-12 T 14-10-2018 Tph_c25040 ae39dc9955384529944a41c37eec74fb 88 SMART SM00966 4 50 2.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c25040 ae39dc9955384529944a41c37eec74fb 88 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 48 2.8E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c25040 ae39dc9955384529944a41c37eec74fb 88 SUPERFAMILY SSF89447 2 43 1.73E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c04500 1c38cbde5b66c15705d8a03ee15ec584 258 Gene3D G3DSA:3.90.1560.10 1 242 2.5E-72 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Tph_c04500 1c38cbde5b66c15705d8a03ee15ec584 258 SUPERFAMILY SSF142823 19 240 1.7E-54 T 14-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Tph_c04500 1c38cbde5b66c15705d8a03ee15ec584 258 Pfam PF04029 2-phosphosulpholactate phosphatase 14 239 2.3E-70 T 14-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 Tph_c09460 322bba3b2429425e055331ec4f4ef840 108 Pfam PF13190 PDGLE domain 10 87 4.3E-18 T 14-10-2018 IPR025937 PDGLE domain Tph_c09460 322bba3b2429425e055331ec4f4ef840 108 ProDom PD486863 PRECURSOR CBIM SIGNAL COBALT MEMBRANE VITAMIN B12 BIOSYNTHESIS COBALAMIN ABC-TYPE 27 80 2.0E-9 T 14-10-2018 Tph_c09960 29b5f52874e047ef40b44d77677d09cd 118 Pfam PF03780 Asp23 family, cell envelope-related function 9 115 5.8E-33 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 Tph_c15280 5f965c71b23035f742d82c2d3ff02037 155 Gene3D G3DSA:3.30.70.3460 24 153 1.5E-41 T 14-10-2018 Tph_c15280 5f965c71b23035f742d82c2d3ff02037 155 SUPERFAMILY SSF46785 6 87 6.87E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Tph_c26920 39ba7d13c5b20efcd24d349ae31fff6f 256 Gene3D G3DSA:3.40.50.700 2 168 3.7E-41 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily Tph_c26920 39ba7d13c5b20efcd24d349ae31fff6f 256 SUPERFAMILY SSF56770 3 218 6.28E-38 T 14-10-2018 Tph_c26920 39ba7d13c5b20efcd24d349ae31fff6f 256 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 14 147 2.2E-24 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 Gene3D G3DSA:3.40.50.880 1 229 1.2E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 SUPERFAMILY SSF52317 2 228 1.39E-75 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 SMART SM01211 1 228 1.1E-134 T 14-10-2018 Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 227 7.2E-96 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 PIRSF PIRSF001586 1 231 4.2E-87 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 214 2.4E-46 T 14-10-2018 Tph_c08450 9ed3816a0c740a58aa6ed9cc021e82d1 238 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 226 45.313 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Tph_c01480 708e5c4bdd2553eaf4f04d14deeb6fef 205 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 189 23.918 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 Tph_c01480 708e5c4bdd2553eaf4f04d14deeb6fef 205 SUPERFAMILY SSF53448 1 186 6.68E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c01480 708e5c4bdd2553eaf4f04d14deeb6fef 205 Gene3D G3DSA:3.90.550.10 6 204 1.8E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Tph_c01480 708e5c4bdd2553eaf4f04d14deeb6fef 205 Pfam PF12804 MobA-like NTP transferase domain 5 154 5.1E-32 T 14-10-2018 IPR025877 MobA-like NTP transferase Tph_c02910 c631231fc8c7b9212b922f3c14e1c685 139 Pfam PF01850 PIN domain 13 125 1.6E-6 T 14-10-2018 IPR002716 PIN domain Tph_c02910 c631231fc8c7b9212b922f3c14e1c685 139 Gene3D G3DSA:3.40.50.1010 9 137 1.2E-21 T 14-10-2018 Tph_c02910 c631231fc8c7b9212b922f3c14e1c685 139 SUPERFAMILY SSF88723 12 139 5.61E-22 T 14-10-2018 IPR029060 PIN-like domain superfamily Tph_c05390 551831c80571c906f71a4da171c87119 243 Gene3D G3DSA:3.30.240.20 171 232 6.6E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Tph_c05390 551831c80571c906f71a4da171c87119 243 Pfam PF04239 Protein of unknown function (DUF421) 90 206 2.1E-36 T 14-10-2018 IPR007353 Protein of unknown function DUF421 Tph_c05390 551831c80571c906f71a4da171c87119 243 Gene3D G3DSA:3.30.240.20 83 156 1.6E-26 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Tph_c13540 52ad8ef0a0e7d66c6f240d6de07963a1 140 Gene3D G3DSA:2.40.440.10 13 140 2.7E-17 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Tph_c13540 52ad8ef0a0e7d66c6f240d6de07963a1 140 SUPERFAMILY SSF141523 17 140 1.14E-12 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Tph_c13540 52ad8ef0a0e7d66c6f240d6de07963a1 140 Pfam PF03734 L,D-transpeptidase catalytic domain 20 139 3.3E-10 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Tph_c05120 324818a44ec2a610fe87c5b9a1f0600d 123 Pfam PF00072 Response regulator receiver domain 5 118 2.0E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c05120 324818a44ec2a610fe87c5b9a1f0600d 123 SUPERFAMILY SSF52172 3 123 7.26E-37 T 14-10-2018 IPR011006 CheY-like superfamily Tph_c05120 324818a44ec2a610fe87c5b9a1f0600d 123 Gene3D G3DSA:3.40.50.12740 1 123 2.4E-37 T 14-10-2018 Tph_c05120 324818a44ec2a610fe87c5b9a1f0600d 123 SMART SM00448 3 118 1.8E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Tph_c17280 d9ae58822291a0d5a287a0f889a71ade 174 SUPERFAMILY SSF50346 3 70 2.2E-11 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c17280 d9ae58822291a0d5a287a0f889a71ade 174 Gene3D G3DSA:2.30.30.240 1 72 3.4E-5 T 14-10-2018 Tph_c17280 d9ae58822291a0d5a287a0f889a71ade 174 SUPERFAMILY SSF50346 85 150 3.92E-8 T 14-10-2018 IPR011033 PRC-barrel-like superfamily Tph_c17280 d9ae58822291a0d5a287a0f889a71ade 174 Pfam PF05239 PRC-barrel domain 83 149 3.5E-6 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c17280 d9ae58822291a0d5a287a0f889a71ade 174 Pfam PF05239 PRC-barrel domain 4 70 5.6E-9 T 14-10-2018 IPR027275 PRC-barrel domain Tph_c12120 d1bbc52713f799d5eb911dadafd3feab 130 Pfam PF14104 Domain of unknown function (DUF4277) 19 116 7.6E-16 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c02660 4093883eb011edd5b6f031b7422b464d 292 Gene3D G3DSA:3.40.50.720 2 285 7.7E-40 T 14-10-2018 Tph_c02660 4093883eb011edd5b6f031b7422b464d 292 Pfam PF13460 NAD(P)H-binding 6 143 1.7E-19 T 14-10-2018 IPR016040 NAD(P)-binding domain Tph_c02660 4093883eb011edd5b6f031b7422b464d 292 SUPERFAMILY SSF51735 3 278 1.24E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Tph_c01300 00e6235967cccf379045dd4b5d5ff028 322 Pfam PF03916 Polysulphide reductase, NrfD 5 281 1.0E-24 T 14-10-2018 IPR005614 NrfD family Tph_c05070 f05c5af5cf36fa7166fb88569fa621d3 121 Gene3D G3DSA:1.10.155.10 4 77 2.1E-17 T 14-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily Tph_c05070 f05c5af5cf36fa7166fb88569fa621d3 121 SUPERFAMILY SSF47757 7 78 4.32E-19 T 14-10-2018 Tph_c05070 f05c5af5cf36fa7166fb88569fa621d3 121 Pfam PF03705 CheR methyltransferase, all-alpha domain 12 61 6.0E-12 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal Tph_c21840 7fcd7e8daf54d5db4dc5a30ea7568772 409 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 24 387 2.0E-68 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 Tph_c21840 7fcd7e8daf54d5db4dc5a30ea7568772 409 Gene3D G3DSA:1.20.1720.10 24 398 1.0E-87 T 14-10-2018 Tph_c21840 7fcd7e8daf54d5db4dc5a30ea7568772 409 Pfam PF07690 Major Facilitator Superfamily 30 365 4.2E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Tph_c21840 7fcd7e8daf54d5db4dc5a30ea7568772 409 SUPERFAMILY SSF103473 23 401 7.59E-58 T 14-10-2018 IPR036259 MFS transporter superfamily Tph_c16340 a752d82bd115231730d5acb81c43a7a6 75 Pfam PF10031 Small integral membrane protein (DUF2273) 15 61 1.4E-18 T 14-10-2018 IPR018730 Protein of unknown function DUF2273 Tph_c12920 0d9d9304c1d719d179e3d3e9131f0173 455 Hamap MF_01221 UPF0210 protein . 5 455 52.585 T 14-10-2018 IPR007841 Uncharacterised protein family UPF0210 Tph_c12920 0d9d9304c1d719d179e3d3e9131f0173 455 SUPERFAMILY SSF51998 6 450 3.02E-178 T 14-10-2018 Tph_c12920 0d9d9304c1d719d179e3d3e9131f0173 455 Gene3D G3DSA:3.20.70.20 5 455 1.3E-177 T 14-10-2018 Tph_c12920 0d9d9304c1d719d179e3d3e9131f0173 455 Pfam PF05167 Uncharacterised ACR (DUF711) 16 419 4.1E-180 T 14-10-2018 IPR007841 Uncharacterised protein family UPF0210 Tph_c15130 ff7506be0ee9ad85003955d11737df40 264 Gene3D G3DSA:3.20.20.20 1 264 7.2E-97 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c15130 ff7506be0ee9ad85003955d11737df40 264 SUPERFAMILY SSF51717 3 262 4.58E-80 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c15130 ff7506be0ee9ad85003955d11737df40 264 Pfam PF00809 Pterin binding enzyme 7 229 2.8E-32 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Tph_c27660 1500d9c0464e279ede104b20892b89ff 475 Gene3D G3DSA:3.20.20.480 1 474 5.0E-138 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c27660 1500d9c0464e279ede104b20892b89ff 475 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 3 474 3.7E-83 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c00610 437f26b0b7e82f6c549e45c6c98cddd7 75 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 9 59 5.0E-4 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 Tph_c00610 437f26b0b7e82f6c549e45c6c98cddd7 75 Pfam PF08141 Small acid-soluble spore protein H family 10 63 5.0E-18 T 14-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 Tph_c18550 7267d5d51c21f9a2f57d8a9efdd81f6c 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 134 3.5E-30 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Tph_c18550 7267d5d51c21f9a2f57d8a9efdd81f6c 158 Gene3D G3DSA:3.40.50.300 3 149 2.8E-36 T 14-10-2018 Tph_c18550 7267d5d51c21f9a2f57d8a9efdd81f6c 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 126 3.1E-33 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Tph_c18550 7267d5d51c21f9a2f57d8a9efdd81f6c 158 SUPERFAMILY SSF52540 23 123 2.72E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c26010 1ca239519a648d9b7acbaf4f2620de08 480 Pfam PF06782 Uncharacterised protein family (UPF0236) 25 437 1.1E-51 T 14-10-2018 IPR009620 Uncharacterised protein family UPF0236 Tph_c20630 92ec0a6862ecb41354040644f79e5b23 549 Pfam PF14104 Domain of unknown function (DUF4277) 1 98 1.5E-24 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c20630 92ec0a6862ecb41354040644f79e5b23 549 SUPERFAMILY SSF53098 259 466 2.28E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c20630 92ec0a6862ecb41354040644f79e5b23 549 Pfam PF01609 Transposase DDE domain 111 456 3.4E-8 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c29110 9074f1177803eccd5965afd9bad70062 453 SUPERFAMILY SSF51182 331 453 2.63E-33 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Tph_c29110 9074f1177803eccd5965afd9bad70062 453 Pfam PF13439 Glycosyltransferase Family 4 22 141 1.5E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Tph_c29110 9074f1177803eccd5965afd9bad70062 453 Gene3D G3DSA:2.60.120.10 332 442 4.6E-20 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Tph_c29110 9074f1177803eccd5965afd9bad70062 453 SUPERFAMILY SSF53756 9 336 1.05E-61 T 14-10-2018 Tph_c29110 9074f1177803eccd5965afd9bad70062 453 Gene3D G3DSA:3.40.50.2000 13 331 5.7E-89 T 14-10-2018 Tph_c29110 9074f1177803eccd5965afd9bad70062 453 Gene3D G3DSA:3.40.50.2000 154 327 5.7E-89 T 14-10-2018 Tph_c29110 9074f1177803eccd5965afd9bad70062 453 Pfam PF00534 Glycosyl transferases group 1 164 299 6.5E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Tph_c29110 9074f1177803eccd5965afd9bad70062 453 Pfam PF01050 Mannose-6-phosphate isomerase 324 448 2.3E-35 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 Tph_c13060 8d5057c5d6eb01e12c151851967342e5 173 Gene3D G3DSA:3.40.109.10 4 171 1.8E-61 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tph_c13060 8d5057c5d6eb01e12c151851967342e5 173 Pfam PF00881 Nitroreductase family 9 66 3.8E-19 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Tph_c13060 8d5057c5d6eb01e12c151851967342e5 173 SUPERFAMILY SSF55469 3 172 9.42E-60 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Tph_c06560 1bc4d7ec671d79e5ba641ad24eb6dd3e 126 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 2 77 6.1E-20 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c06560 1bc4d7ec671d79e5ba641ad24eb6dd3e 126 Pfam PF07282 Putative transposase DNA-binding domain 50 119 1.8E-25 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c04700 f62a9c44d34ac5668d2a24990a019d5d 403 Pfam PF02073 Thermophilic metalloprotease (M29) 36 365 3.9E-58 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 Tph_c04700 f62a9c44d34ac5668d2a24990a019d5d 403 SUPERFAMILY SSF144052 33 392 9.42E-112 T 14-10-2018 Tph_c04700 f62a9c44d34ac5668d2a24990a019d5d 403 Gene3D G3DSA:3.40.1830.10 31 197 4.5E-13 T 14-10-2018 IPR035097 Peptidase M29, N-terminal Tph_c03590 5ab67a3adf31354b7fe4f8040db4d7f0 475 Pfam PF12176 Methanol-cobalamin methyltransferase B subunit 6 463 5.3E-192 T 14-10-2018 IPR021079 Methanol-cobalamin methyltransferase, B subunit KEGG: 00680+2.1.1.90 Tph_c07800 f617cfedebe3a0b97a65b362e5a644a4 149 Gene3D G3DSA:1.10.260.40 3 104 2.3E-17 T 14-10-2018 Tph_c07800 f617cfedebe3a0b97a65b362e5a644a4 149 SMART SM00530 6 62 7.6E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c07800 f617cfedebe3a0b97a65b362e5a644a4 149 SUPERFAMILY SSF47413 1 67 1.82E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c07800 f617cfedebe3a0b97a65b362e5a644a4 149 Pfam PF01381 Helix-turn-helix 7 62 3.7E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Tph_c28830 c914deaeb38c859c25ae952cc72bed76 320 Pfam PF01757 Acyltransferase family 7 302 1.6E-24 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Tph_c22250 5304df42f21457f67564ac460193f540 495 SUPERFAMILY SSF53623 60 338 1.83E-30 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Tph_c22250 5304df42f21457f67564ac460193f540 495 Pfam PF08245 Mur ligase middle domain 64 204 1.3E-11 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Tph_c22250 5304df42f21457f67564ac460193f540 495 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 62 85 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Tph_c22250 5304df42f21457f67564ac460193f540 495 Pfam PF08353 Domain of unknown function (DUF1727) 359 468 1.4E-33 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 Tph_c16360 6a64cc8499cab6d126f8aaa3d9ded9d4 130 Pfam PF03780 Asp23 family, cell envelope-related function 14 118 2.7E-40 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 Tph_c26310 4c4f694b19b243a17611658243ca579c 496 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 100 3.1E-6 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26310 4c4f694b19b243a17611658243ca579c 496 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 320 332 2.7E-8 T 14-10-2018 Tph_c26310 4c4f694b19b243a17611658243ca579c 496 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 2.7E-8 T 14-10-2018 Tph_c26310 4c4f694b19b243a17611658243ca579c 496 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 2.7E-8 T 14-10-2018 Tph_c26310 4c4f694b19b243a17611658243ca579c 496 Pfam PF00361 Proton-conducting membrane transporter 131 424 2.8E-52 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21950 84f7c9ab8e35ad0cd029f9dc9fc70ddf 85 SUPERFAMILY SSF53041 4 77 1.44E-12 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Tph_c21950 84f7c9ab8e35ad0cd029f9dc9fc70ddf 85 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 Tph_c21950 84f7c9ab8e35ad0cd029f9dc9fc70ddf 85 Gene3D G3DSA:3.40.50.1390 2 82 9.3E-20 T 14-10-2018 Tph_c21950 84f7c9ab8e35ad0cd029f9dc9fc70ddf 85 SMART SM00857 4 85 6.9E-4 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c21950 84f7c9ab8e35ad0cd029f9dc9fc70ddf 85 Pfam PF00239 Resolvase, N terminal domain 4 77 3.6E-15 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Tph_c26290 50e4b3d845b0691a205e3ee027476849 313 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 199 212 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26290 50e4b3d845b0691a205e3ee027476849 313 Pfam PF00146 NADH dehydrogenase 14 308 7.4E-55 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c00040 a192aaaa606774c273320e1acb87d8f3 86 Pfam PF04025 Domain of unknown function (DUF370) 2 76 9.8E-11 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A Tph_c27410 aec7b81c79f5c00e8642ed8cc7b14c47 161 Pfam PF00430 ATP synthase B/B' CF(0) 8 137 4.3E-35 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Tph_c27410 aec7b81c79f5c00e8642ed8cc7b14c47 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 2 139 14.091 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Tph_c27410 aec7b81c79f5c00e8642ed8cc7b14c47 161 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 12 157 1.0E-33 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Tph_c27410 aec7b81c79f5c00e8642ed8cc7b14c47 161 SUPERFAMILY SSF81573 64 122 4.32E-5 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Tph_c09730 1ca55ffbcf9ba42db11392e115c79f11 429 PIRSF PIRSF033563 1 429 2.3E-109 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Tph_c09730 1ca55ffbcf9ba42db11392e115c79f11 429 Pfam PF06245 Protein of unknown function (DUF1015) 4 425 7.9E-123 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 Tph_c22280 8331a5f66db9c302d737b516915f20b7 432 Gene3D G3DSA:3.20.20.540 45 363 1.1E-127 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c22280 8331a5f66db9c302d737b516915f20b7 432 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 1 423 6.9E-163 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c22280 8331a5f66db9c302d737b516915f20b7 432 Pfam PF01964 Radical SAM ThiC family 2 422 1.0E-173 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c25190 5b9eb1766d55795365d0572070cad458 522 Gene3D G3DSA:3.40.190.10 39 267 2.2E-63 T 14-10-2018 Tph_c25190 5b9eb1766d55795365d0572070cad458 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 436 8.2E-86 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Tph_c25190 5b9eb1766d55795365d0572070cad458 522 SUPERFAMILY SSF53850 55 520 2.17E-107 T 14-10-2018 Tph_c25190 5b9eb1766d55795365d0572070cad458 522 Gene3D G3DSA:3.10.105.10 268 492 7.2E-42 T 14-10-2018 Tph_c25190 5b9eb1766d55795365d0572070cad458 522 PIRSF PIRSF002741 1 522 1.1E-84 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Tph_c25190 5b9eb1766d55795365d0572070cad458 522 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 101 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site Tph_c21590 f1e2dec89863d48853a3b2db8b33b707 114 SUPERFAMILY SSF118010 4 105 1.26E-22 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily Tph_c21590 f1e2dec89863d48853a3b2db8b33b707 114 Gene3D G3DSA:3.30.70.1490 1 109 4.6E-28 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily Tph_c21590 f1e2dec89863d48853a3b2db8b33b707 114 Pfam PF04327 Cysteine protease Prp 5 102 3.3E-22 T 14-10-2018 IPR007422 Cysteine protease Prp Tph_c20320 9327898ad1e6e77350ae0eae40406265 335 Gene3D G3DSA:3.10.310.10 7 334 3.5E-123 T 14-10-2018 Tph_c20320 9327898ad1e6e77350ae0eae40406265 335 PIRSF PIRSF029792 1 335 6.0E-120 T 14-10-2018 IPR008794 Proline racemase family Tph_c20320 9327898ad1e6e77350ae0eae40406265 335 Gene3D G3DSA:3.10.310.10 146 311 3.5E-123 T 14-10-2018 Tph_c20320 9327898ad1e6e77350ae0eae40406265 335 SUPERFAMILY SSF54506 5 332 2.55E-105 T 14-10-2018 Tph_c20320 9327898ad1e6e77350ae0eae40406265 335 Pfam PF05544 Proline racemase 9 332 4.6E-112 T 14-10-2018 IPR008794 Proline racemase family Tph_c15000 b162926835664f489f0bae97914d0847 296 SUPERFAMILY SSF90257 108 199 3.4E-6 T 14-10-2018 Tph_c18280 ceb740be8eb51589b79cc77195e32a7d 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 372 8.9E-123 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 Tph_c18280 ceb740be8eb51589b79cc77195e32a7d 383 Gene3D G3DSA:3.40.50.1970 2 184 1.4E-54 T 14-10-2018 Tph_c18280 ceb740be8eb51589b79cc77195e32a7d 383 Gene3D G3DSA:1.20.1090.10 185 382 5.4E-67 T 14-10-2018 Tph_c18280 ceb740be8eb51589b79cc77195e32a7d 383 SUPERFAMILY SSF56796 3 381 7.2E-122 T 14-10-2018 Tph_c18280 ceb740be8eb51589b79cc77195e32a7d 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 Tph_c17830 81cfd6f514639338c50898eb7d3eb34c 433 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 4 427 89.228 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c17830 81cfd6f514639338c50898eb7d3eb34c 433 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 5 423 6.7E-186 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c17830 81cfd6f514639338c50898eb7d3eb34c 433 Gene3D G3DSA:3.20.20.540 46 363 4.6E-140 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c17830 81cfd6f514639338c50898eb7d3eb34c 433 Pfam PF01964 Radical SAM ThiC family 5 422 5.4E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Tph_c09450 e660a7e4a610e4b87f8330b0a644c6f4 141 Pfam PF12953 Domain of unknown function (DUF3842) 2 130 9.0E-54 T 14-10-2018 IPR024208 Protein of unknown function DUF3842 Tph_c12130 c2c9fcf566c8b1dd0b142a97d4d42fcd 445 SUPERFAMILY SSF53098 289 394 4.32E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c27720 7e832883969342acaea3f2d88c6a2a9b 349 TIGRFAM TIGR02368 dimeth_PyL: dimethylamine:corrinoid methyltransferase 2 349 1.1E-126 T 14-10-2018 IPR012653 Dimethylamine methyltransferase MtbB GO:0008168|GO:0015948 KEGG: 00680+2.1.1.249|MetaCyc: PWY-5248 Tph_c27720 7e832883969342acaea3f2d88c6a2a9b 349 Pfam PF09505 Dimethylamine methyltransferase (Dimeth_PyL) 3 349 7.0E-148 T 14-10-2018 IPR012653 Dimethylamine methyltransferase MtbB GO:0008168|GO:0015948 KEGG: 00680+2.1.1.249|MetaCyc: PWY-5248 Tph_c22140 c2499f18852712069d2b8b3a78556351 141 Pfam PF05400 Flagellar protein FliT 29 125 7.3E-19 T 14-10-2018 IPR008622 Flagellar protein FliT Tph_c10030 71b268639d2d88d32492667695e94fa3 480 Pfam PF06782 Uncharacterised protein family (UPF0236) 25 437 5.4E-52 T 14-10-2018 IPR009620 Uncharacterised protein family UPF0236 Tph_c26880 5488da1d85940b718548b73770ddf9a4 217 SUPERFAMILY SSF52540 7 211 3.52E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c26880 5488da1d85940b718548b73770ddf9a4 217 Gene3D G3DSA:3.40.50.300 7 217 1.5E-62 T 14-10-2018 Tph_c26880 5488da1d85940b718548b73770ddf9a4 217 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 27 186 7.0E-28 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain Tph_c26880 5488da1d85940b718548b73770ddf9a4 217 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 5 210 9.9E-85 T 14-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 Tph_c26880 5488da1d85940b718548b73770ddf9a4 217 PIRSF PIRSF005624 1 217 2.4E-88 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 Tph_c27540 d629ba1ae280ba3687e3c42063ba8c7e 344 PIRSF PIRSF019205 1 344 9.2E-141 T 14-10-2018 IPR012443 Protein of unknown function DUF1646 Tph_c27540 d629ba1ae280ba3687e3c42063ba8c7e 344 Pfam PF07854 Protein of unknown function (DUF1646) 4 344 1.2E-132 T 14-10-2018 IPR012443 Protein of unknown function DUF1646 Tph_c01550 7f967d3176d0cf51b18e628d73763212 353 Gene3D G3DSA:1.10.3470.10 15 351 2.2E-98 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c01550 7f967d3176d0cf51b18e628d73763212 353 SUPERFAMILY SSF81345 14 347 3.27E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c01550 7f967d3176d0cf51b18e628d73763212 353 Pfam PF01032 FecCD transport family 27 347 8.4E-82 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tph_c22870 bac34adfd8d021aa9a776413163caea2 124 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 20 121 1.3E-26 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV Tph_c13620 75ea3688d099b49acaf5edabed520ead 402 Pfam PF02371 Transposase IS116/IS110/IS902 family 266 350 1.3E-13 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c13620 75ea3688d099b49acaf5edabed520ead 402 Pfam PF01548 Transposase 4 157 3.1E-36 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c04320 8d74ce184ea22bb9b31e05091cbc0adc 113 SUPERFAMILY SSF89447 8 56 1.31E-7 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Tph_c04320 8d74ce184ea22bb9b31e05091cbc0adc 113 SMART SM00966 6 49 2.6E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 Tph_c13300 f013aae3a23996064e0b1bd4a011a74a 116 Pfam PF01925 Sulfite exporter TauE/SafE 5 113 3.7E-27 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Tph_c24840 07e3ef7bbb4f84382194159107ae02f6 308 SUPERFAMILY SSF56601 54 293 1.79E-44 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Tph_c24840 07e3ef7bbb4f84382194159107ae02f6 308 Gene3D G3DSA:3.40.710.10 45 298 5.8E-67 T 14-10-2018 Tph_c24840 07e3ef7bbb4f84382194159107ae02f6 308 Pfam PF13354 Beta-lactamase enzyme family 74 268 8.7E-44 T 14-10-2018 Tph_c09510 8ebcc2ef9f57f80bf3aae8c4e006cebe 348 Pfam PF00793 DAHP synthetase I family 91 330 2.2E-76 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 Tph_c09510 8ebcc2ef9f57f80bf3aae8c4e006cebe 348 SUPERFAMILY SSF51569 1 335 5.31E-121 T 14-10-2018 Tph_c09510 8ebcc2ef9f57f80bf3aae8c4e006cebe 348 Gene3D G3DSA:3.30.70.1140 1 75 4.4E-26 T 14-10-2018 Tph_c09510 8ebcc2ef9f57f80bf3aae8c4e006cebe 348 Gene3D G3DSA:3.20.20.70 76 333 2.1E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c09510 8ebcc2ef9f57f80bf3aae8c4e006cebe 348 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 71 327 2.7E-122 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Tph_c26100 f975944ef7a10cecdf41b15f181596a7 159 Gene3D G3DSA:1.20.5.1030 98 156 8.2E-18 T 14-10-2018 IPR038379 SecE superfamily Tph_c26100 f975944ef7a10cecdf41b15f181596a7 159 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 104 156 2.1E-17 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c26100 f975944ef7a10cecdf41b15f181596a7 159 Hamap MF_00422 Protein translocase subunit SecE [secE]. 100 155 11.321 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Tph_c26100 f975944ef7a10cecdf41b15f181596a7 159 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 103 157 6.6E-15 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Tph_c05150 a6c537621c141aac238d269b45691e89 310 Gene3D G3DSA:3.30.230.10 20 137 1.9E-12 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Tph_c05150 a6c537621c141aac238d269b45691e89 310 PIRSF PIRSF033887 1 270 8.8E-76 T 14-10-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 Tph_c05150 a6c537621c141aac238d269b45691e89 310 Pfam PF08544 GHMP kinases C terminal 195 254 2.8E-5 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Tph_c05150 a6c537621c141aac238d269b45691e89 310 SUPERFAMILY SSF54211 5 142 5.69E-18 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Tph_c05150 a6c537621c141aac238d269b45691e89 310 Pfam PF00288 GHMP kinases N terminal domain 77 124 9.0E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Tph_c07980 32ece283aca6af15dc48e424151a1798 115 Pfam PF01934 Protein of unknown function DUF86 13 103 3.2E-27 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Tph_c04110 578361b38343dc4db566f6b183e85d80 201 Pfam PF01184 GPR1/FUN34/yaaH family 13 200 1.9E-45 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Tph_c10500 f531fd8ecebd03549b66ff290a471466 78 Pfam PF05120 Gas vesicle protein G 4 75 2.2E-15 T 14-10-2018 IPR007804 Gas vesicle protein GvpG Tph_c05160 faac9698df725281e7c519e492136e39 364 Gene3D G3DSA:3.90.1150.10 24 354 1.3E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Tph_c05160 faac9698df725281e7c519e492136e39 364 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Tph_c05160 faac9698df725281e7c519e492136e39 364 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 354 4.8E-93 T 14-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 Tph_c05160 faac9698df725281e7c519e492136e39 364 Gene3D G3DSA:3.40.640.10 36 261 1.3E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Tph_c05160 faac9698df725281e7c519e492136e39 364 SUPERFAMILY SSF53383 5 357 2.13E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Tph_c05160 faac9698df725281e7c519e492136e39 364 Pfam PF00155 Aminotransferase class I and II 24 345 3.2E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Tph_c06110 e6ec10723f795975301e76257303aae3 525 SUPERFAMILY SSF56281 5 502 2.17E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Tph_c19380 04ebc652e91cd2d325aa35eb3c2d0454 115 Pfam PF09520 Type II restriction endonuclease, TdeIII 50 111 7.5E-16 T 14-10-2018 IPR019045 Restriction endonuclease, type II, TdeIII GO:0003677|GO:0009036|GO:0009307 Tph_c08180 14c3d7e74016d8dd390050912a4eaa0a 265 Gene3D G3DSA:3.40.50.720 2 251 1.7E-85 T 14-10-2018 Tph_c08180 14c3d7e74016d8dd390050912a4eaa0a 265 SUPERFAMILY SSF69572 4 249 2.75E-87 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Tph_c08180 14c3d7e74016d8dd390050912a4eaa0a 265 Pfam PF00899 ThiF family 10 248 1.6E-65 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Tph_c10930 3387746f502ad01c857097f654c89c4d 167 Pfam PF03748 Flagellar basal body-associated protein FliL 75 167 8.6E-20 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Tph_c04480 72ca504700122463dd4eead2b21633a6 279 SUPERFAMILY SSF51621 4 197 2.48E-62 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Tph_c04480 72ca504700122463dd4eead2b21633a6 279 Gene3D G3DSA:3.20.20.70 1 252 3.1E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Tph_c04480 72ca504700122463dd4eead2b21633a6 279 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 9 273 3.2E-99 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like Tph_c04480 72ca504700122463dd4eead2b21633a6 279 PIRSF PIRSF034452 2 277 3.7E-79 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like Tph_c20110 28b3effc685361e59b46dab98cf0de80 406 Pfam PF01548 Transposase 9 151 4.2E-36 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 Tph_c20110 28b3effc685361e59b46dab98cf0de80 406 Pfam PF02371 Transposase IS116/IS110/IS902 family 249 332 1.1E-23 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 Tph_c02960 aff5c4caf9d6e00db2dacaa0b2d188d2 103 Gene3D G3DSA:3.30.460.10 2 97 2.8E-18 T 14-10-2018 Tph_c02960 aff5c4caf9d6e00db2dacaa0b2d188d2 103 Pfam PF01909 Nucleotidyltransferase domain 26 86 2.9E-10 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Tph_c02960 aff5c4caf9d6e00db2dacaa0b2d188d2 103 SUPERFAMILY SSF81301 9 86 5.24E-16 T 14-10-2018 Tph_c07880 c731fe1df5d3de1214e6b98a0e53ffb5 570 Pfam PF01609 Transposase DDE domain 228 496 1.7E-9 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Tph_c07880 c731fe1df5d3de1214e6b98a0e53ffb5 570 SUPERFAMILY SSF53098 436 504 9.1E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c04400 ffca3fd6d2fa73061875d4dd61027180 1135 Pfam PF13555 P-loop containing region of AAA domain 4 62 2.4E-16 T 14-10-2018 Tph_c04400 ffca3fd6d2fa73061875d4dd61027180 1135 Pfam PF13558 Putative exonuclease SbcCD, C subunit 984 1074 6.5E-25 T 14-10-2018 Tph_c04400 ffca3fd6d2fa73061875d4dd61027180 1135 SUPERFAMILY SSF52540 4 431 1.22E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c14980 355f58ae1bb2559e12d4dccc2a4d3a64 220 Pfam PF12654 Domain of unknown function (DUF3786) 32 204 6.0E-62 T 14-10-2018 IPR024264 Domain of unknown function DUF3786 Tph_c04410 203f342d68095eaf7f5303ee174cf5c0 214 Pfam PF13835 Domain of unknown function (DUF4194) 22 187 1.6E-37 T 14-10-2018 IPR025449 Protein of unknown function DUF4194 Tph_c08160 26dcd9a57c146befe8c15a7e289eafbb 386 Gene3D G3DSA:3.40.50.2000 208 362 6.3E-35 T 14-10-2018 Tph_c08160 26dcd9a57c146befe8c15a7e289eafbb 386 Pfam PF13692 Glycosyl transferases group 1 220 351 5.7E-10 T 14-10-2018 Tph_c08160 26dcd9a57c146befe8c15a7e289eafbb 386 SUPERFAMILY SSF53756 76 380 3.51E-22 T 14-10-2018 Tph_c20600 6e68544bc46425b35d168a0e87576cae 362 Pfam PF03595 Voltage-dependent anion channel 21 350 2.6E-66 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Tph_c20600 6e68544bc46425b35d168a0e87576cae 362 Gene3D G3DSA:1.50.10.150 16 361 5.1E-33 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 SMART SM00422 1 70 5.7E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 Pfam PF13411 MerR HTH family regulatory protein 1 65 1.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 Gene3D G3DSA:1.10.1660.10 1 131 1.7E-37 T 14-10-2018 Tph_c21690 73570425a58b6a4391139d290e8d1cbf 132 SUPERFAMILY SSF46955 1 115 5.49E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Tph_c10610 a13c809ae583c41d56250d8e2654a2e2 124 ProSitePatterns PS00234 Gas vesicles protein GVPa signature 1. 15 29 - T 14-10-2018 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 Tph_c10610 a13c809ae583c41d56250d8e2654a2e2 124 Pfam PF00741 Gas vesicle protein 14 52 5.6E-16 T 14-10-2018 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 Tph_c02360 580f429897412fb3b87718382498fbde 940 Pfam PF04932 O-Antigen ligase 325 552 7.9E-17 T 14-10-2018 IPR007016 O-antigen ligase-related Tph_c02360 580f429897412fb3b87718382498fbde 940 SUPERFAMILY SSF48452 682 929 1.06E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c02360 580f429897412fb3b87718382498fbde 940 Gene3D G3DSA:1.25.40.10 813 938 6.2E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c02360 580f429897412fb3b87718382498fbde 940 Gene3D G3DSA:1.25.40.10 665 805 7.0E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Tph_c18100 14a8208579586d5b37b7b43ef05f1e08 399 Gene3D G3DSA:3.60.21.10 94 310 1.9E-5 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Tph_c18100 14a8208579586d5b37b7b43ef05f1e08 399 SMART SM00854 67 313 2.1E-91 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA Tph_c18100 14a8208579586d5b37b7b43ef05f1e08 399 SUPERFAMILY SSF56300 67 345 1.14E-39 T 14-10-2018 Tph_c18100 14a8208579586d5b37b7b43ef05f1e08 399 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 67 312 5.4E-79 T 14-10-2018 IPR019079 Capsule synthesis protein, CapA Tph_c00980 d90bd18bb3fe9a2c0992ff5144e58198 77 Pfam PF01527 Transposase 3 32 2.1E-5 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Tph_c25380 dbcd3e1900047bc70f444022a007a0b8 169 Pfam PF09413 Putative prokaryotic signal transducing protein 54 110 8.2E-6 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 Tph_c02060 cd0b04d8e4e0ba4ee27a1003a70d9832 77 Pfam PF04255 Protein of unknown function (DUF433) 10 64 5.0E-21 T 14-10-2018 IPR007367 Protein of unknown function DUF433 Tph_c02060 cd0b04d8e4e0ba4ee27a1003a70d9832 77 SUPERFAMILY SSF46689 4 67 1.59E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Tph_c02060 cd0b04d8e4e0ba4ee27a1003a70d9832 77 Gene3D G3DSA:1.10.10.10 9 75 5.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Tph_c19270 5fe8b4008eafd19cf9ab2019794b487b 164 Pfam PF14104 Domain of unknown function (DUF4277) 33 128 5.6E-14 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c11880 bdc90548392a86037d068f4298fc7f5d 85 SUPERFAMILY SSF47413 11 53 7.51E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Tph_c25140 63a84435e670672d87f0378fef919d5d 239 Pfam PF00005 ABC transporter 29 174 9.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Tph_c25140 63a84435e670672d87f0378fef919d5d 239 SMART SM00382 34 222 7.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Tph_c25140 63a84435e670672d87f0378fef919d5d 239 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Tph_c25140 63a84435e670672d87f0378fef919d5d 239 SUPERFAMILY SSF52540 6 231 9.27E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c25140 63a84435e670672d87f0378fef919d5d 239 Gene3D G3DSA:3.40.50.300 2 238 3.8E-67 T 14-10-2018 Tph_c25990 3e7fa2c5e5b990595d0f30beeff4e18c 229 Pfam PF07556 Protein of unknown function (DUF1538) 19 227 5.0E-65 T 14-10-2018 IPR011435 Protein of unknown function DUF1538 Tph_c00700 56edef8c840bf42ea4d28f882be49632 96 Pfam PF01250 Ribosomal protein S6 4 92 9.0E-30 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00700 56edef8c840bf42ea4d28f882be49632 96 Gene3D G3DSA:3.30.70.60 1 96 1.9E-32 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Tph_c00700 56edef8c840bf42ea4d28f882be49632 96 SUPERFAMILY SSF54995 2 94 2.09E-30 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00700 56edef8c840bf42ea4d28f882be49632 96 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c00700 56edef8c840bf42ea4d28f882be49632 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 21.539 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Tph_c00700 56edef8c840bf42ea4d28f882be49632 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 2 94 7.2E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c23110 8af27ca3b9eb6f3a3d771aec94907802 143 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 107 9.1E-8 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component Tph_c28620 6115f7582e5bd3ccab8846cc76688bd7 91 PIRSF PIRSF037257 1 86 9.3E-30 T 14-10-2018 IPR009366 Protein Veg GO:0006355 Tph_c28620 6115f7582e5bd3ccab8846cc76688bd7 91 Pfam PF06257 Biofilm formation stimulator VEG 6 75 2.3E-28 T 14-10-2018 IPR009366 Protein Veg GO:0006355 Tph_c28620 6115f7582e5bd3ccab8846cc76688bd7 91 Gene3D G3DSA:2.30.30.100 1 78 2.7E-22 T 14-10-2018 Tph_c20220 291a83923e72cd23d191b6aecfdd899f 309 SUPERFAMILY SSF55186 176 272 7.85E-5 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Tph_c23160 0dccec0940ec16211c770d2b09bbe1d2 440 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 37 385 4.8E-95 T 14-10-2018 IPR006427 Phage portal protein, HK97 Tph_c23160 0dccec0940ec16211c770d2b09bbe1d2 440 Pfam PF04860 Phage portal protein 46 380 1.5E-119 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein Tph_c28190 a71c229cd521cf9a5eb52189d0058ee7 262 Pfam PF00395 S-layer homology domain 89 129 1.2E-13 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28190 a71c229cd521cf9a5eb52189d0058ee7 262 Pfam PF00395 S-layer homology domain 149 191 2.5E-15 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28190 a71c229cd521cf9a5eb52189d0058ee7 262 Pfam PF00395 S-layer homology domain 209 250 1.4E-8 T 14-10-2018 IPR001119 S-layer homology domain Tph_c24490 ff9799bfafda1f3f5295446d0621085e 365 Pfam PF03787 RAMP superfamily 49 302 1.1E-15 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein Tph_c02410 0148252906ae0f80b9e22c9214d2c736 196 SMART SM00909 90 178 2.1E-27 T 14-10-2018 IPR019606 GerMN domain Tph_c02410 0148252906ae0f80b9e22c9214d2c736 196 Pfam PF10646 Sporulation and spore germination 64 174 7.3E-26 T 14-10-2018 IPR019606 GerMN domain Tph_c21450 437f703d7bbb69e2a865a87a107df810 395 SUPERFAMILY SSF49299 169 260 5.62E-9 T 14-10-2018 IPR035986 PKD domain superfamily Tph_c21450 437f703d7bbb69e2a865a87a107df810 395 Pfam PF13448 Domain of unknown function (DUF4114) 117 158 2.5E-6 T 14-10-2018 IPR025193 Domain of unknown function DUF4114 Tph_c21450 437f703d7bbb69e2a865a87a107df810 395 Gene3D G3DSA:2.60.40.10 163 258 2.0E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold Tph_c28910 9088df74d2486706dffe349d8b9df8e8 228 SUPERFAMILY SSF52540 22 216 2.48E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c03010 6fa515c0f5d7066514e5ca851bbc94f7 332 Pfam PF04754 Putative transposase, YhgA-like 7 105 2.7E-8 T 14-10-2018 IPR006842 Transposase (putative), YhgA-like Tph_c23210 815c3ca7a526f8ceaf58a6346c05d830 299 Pfam PF12224 Putative amidoligase enzyme 4 239 9.0E-68 T 14-10-2018 IPR022025 Putative amidoligase enzyme Tph_c11990 3e9e923ed49bc08e9a42807e7512ea26 61 Pfam PF12841 YvrJ protein family 7 40 1.8E-13 T 14-10-2018 IPR024419 Protein of unknown function YvrJ Tph_c07290 2a41971bd03e29cf54d60896d61b42ee 153 Pfam PF01478 Type IV leader peptidase family 19 111 2.9E-9 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Tph_c04030 5cbb2ac9f61c4823877fb6c18887a82d 181 SUPERFAMILY SSF52935 1 180 8.24E-71 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c04030 5cbb2ac9f61c4823877fb6c18887a82d 181 Pfam PF02887 Pyruvate kinase, alpha/beta domain 13 158 1.5E-18 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c04030 5cbb2ac9f61c4823877fb6c18887a82d 181 ProDom PD022619 AF0103 MM1100 MJ0504 UNCHARACTERIZED SIMILAR MA4416 20 178 4.0E-53 T 14-10-2018 IPR015074 Protein of unknown function DUF1867 Tph_c04030 5cbb2ac9f61c4823877fb6c18887a82d 181 Gene3D G3DSA:3.40.1380.20 1 180 1.5E-72 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Tph_c04030 5cbb2ac9f61c4823877fb6c18887a82d 181 PIRSF PIRSF016138 1 181 1.1E-75 T 14-10-2018 IPR015074 Protein of unknown function DUF1867 Tph_c20760 c3717be2a32661dca6d56cb8a0767039 207 Pfam PF12654 Domain of unknown function (DUF3786) 20 194 1.6E-45 T 14-10-2018 IPR024264 Domain of unknown function DUF3786 Tph_c12860 904c644694f1c0f9668e27a057a83f56 89 Pfam PF02325 YGGT family 12 81 7.6E-24 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 Tph_c25330 43fcd4d69ec849c6f6e26ffbb03c3dc8 207 SUPERFAMILY SSF161098 91 194 3.27E-12 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c25330 43fcd4d69ec849c6f6e26ffbb03c3dc8 207 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 195 1.1E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c25330 43fcd4d69ec849c6f6e26ffbb03c3dc8 207 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 73 4.3E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Tph_c25330 43fcd4d69ec849c6f6e26ffbb03c3dc8 207 Gene3D G3DSA:1.10.3720.10 87 196 1.8E-7 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c14100 4c8c8387c7622ce4981841bd381c89b1 137 Pfam PF13751 Transposase DDE domain 14 107 1.2E-15 T 14-10-2018 IPR025668 Transposase DDE domain Tph_c21290 f0df7f294208857aee5d59e53f073134 389 Gene3D G3DSA:2.30.42.10 293 389 3.0E-31 T 14-10-2018 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 SMART SM00228 293 375 2.0E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 Gene3D G3DSA:2.40.10.10 62 182 2.1E-33 T 14-10-2018 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 SUPERFAMILY SSF50494 62 286 4.57E-64 T 14-10-2018 IPR009003 Peptidase S1, PA clan Tph_c21290 f0df7f294208857aee5d59e53f073134 389 Pfam PF13365 Trypsin-like peptidase domain 120 257 4.8E-34 T 14-10-2018 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 SUPERFAMILY SSF50156 266 388 6.18E-26 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 Gene3D G3DSA:2.40.10.10 183 292 7.4E-43 T 14-10-2018 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 Pfam PF13180 PDZ domain 293 384 8.1E-18 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 8.0E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 8.0E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 PRINTS PR00834 HtrA/DegQ protease family signature 228 245 8.0E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 PRINTS PR00834 HtrA/DegQ protease family signature 250 267 8.0E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 8.0E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tph_c21290 f0df7f294208857aee5d59e53f073134 389 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 8.0E-49 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Tph_c14500 b90e3d63fa057500a4641dc0ee052b42 292 Pfam PF08812 YtxC-like family 71 275 8.4E-59 T 14-10-2018 IPR014199 Sporulation protein YtxC Tph_c23450 ba6edd0f97bb4d54a821bfa6892cceb6 122 SUPERFAMILY SSF53146 1 121 5.23E-27 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c23450 ba6edd0f97bb4d54a821bfa6892cceb6 122 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 13 102 1.1E-19 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis Tph_c23450 ba6edd0f97bb4d54a821bfa6892cceb6 122 Gene3D G3DSA:3.30.420.130 1 112 5.3E-29 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily Tph_c24660 65d129b48cf20c4ed9dd12ad0b851045 225 Gene3D G3DSA:3.30.240.20 77 152 3.2E-24 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Tph_c24660 65d129b48cf20c4ed9dd12ad0b851045 225 Pfam PF04239 Protein of unknown function (DUF421) 165 223 1.6E-7 T 14-10-2018 IPR007353 Protein of unknown function DUF421 Tph_c24660 65d129b48cf20c4ed9dd12ad0b851045 225 Pfam PF04239 Protein of unknown function (DUF421) 86 183 2.6E-26 T 14-10-2018 IPR007353 Protein of unknown function DUF421 Tph_c24660 65d129b48cf20c4ed9dd12ad0b851045 225 Gene3D G3DSA:3.30.240.20 166 224 3.9E-14 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily Tph_c10390 961d21ddf5b9ea031eceb60ef5b50925 159 SUPERFAMILY SSF103256 11 136 2.88E-40 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Tph_c10390 961d21ddf5b9ea031eceb60ef5b50925 159 Gene3D G3DSA:3.10.690.10 1 139 1.1E-47 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Tph_c10390 961d21ddf5b9ea031eceb60ef5b50925 159 Pfam PF02577 Bifunctional nuclease 6 125 1.6E-43 T 14-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 Tph_c19450 8625dc79e907f3c9654305ae70305c01 128 Pfam PF10114 Sensory domain found in PocR 48 113 6.7E-15 T 14-10-2018 IPR018771 PocR domain Tph_c06310 571e87a5850f7c7adb31aed17cbd350c 118 Pfam PF05717 IS66 Orf2 like protein 9 107 1.2E-41 T 14-10-2018 IPR008878 Transposase IS66, Orf2 Tph_c23680 80af87f313447846a3c690f7daccd94f 240 Pfam PF02596 Uncharacterised ArCR, COG2043 4 222 3.5E-41 T 14-10-2018 IPR003748 Protein of unknown function DUF169 Tph_c24940 58cfb58b32f3c93c095aeb2531b9e4c1 247 Pfam PF10670 Domain of unknown function (DUF4198) 12 222 1.2E-30 T 14-10-2018 IPR019613 Protein of unknown function DUF4198 Tph_c22020 6dcfdd9ef39240bb939859b7735e15d7 1148 SUPERFAMILY SSF52540 37 343 4.88E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c18970 d1a68bb9424c992b7f4c530a6f65f93f 100 SUPERFAMILY SSF143430 3 72 6.28E-20 T 14-10-2018 Tph_c18970 d1a68bb9424c992b7f4c530a6f65f93f 100 Pfam PF09827 CRISPR associated protein Cas2 4 71 5.8E-18 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 Tph_c18970 d1a68bb9424c992b7f4c530a6f65f93f 100 Gene3D G3DSA:3.30.70.240 1 67 4.7E-20 T 14-10-2018 Tph_c18970 d1a68bb9424c992b7f4c530a6f65f93f 100 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 4 72 3.2E-13 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tph_c18970 d1a68bb9424c992b7f4c530a6f65f93f 100 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 91 15.383 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 Tph_c15890 373a173b438d642df405522dff26ffde 231 Pfam PF11167 Protein of unknown function (DUF2953) 125 179 1.8E-13 T 14-10-2018 IPR021338 Protein of unknown function DUF2953 Tph_c01070 c00ed302b389f2b6f8186559794419d9 364 Pfam PF01032 FecCD transport family 38 359 2.1E-92 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 Tph_c01070 c00ed302b389f2b6f8186559794419d9 364 Gene3D G3DSA:1.10.3470.10 25 363 1.0E-102 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c01070 c00ed302b389f2b6f8186559794419d9 364 SUPERFAMILY SSF81345 20 359 2.22E-83 T 14-10-2018 IPR037294 ABC transporter, BtuC-like Tph_c26350 c0fb1df4552f38462ec9a6e567f5f4c6 256 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 149 1.5E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c26350 c0fb1df4552f38462ec9a6e567f5f4c6 256 Gene3D G3DSA:3.40.50.12280 2 177 2.0E-51 T 14-10-2018 Tph_c26350 c0fb1df4552f38462ec9a6e567f5f4c6 256 SUPERFAMILY SSF56770 28 163 3.92E-50 T 14-10-2018 Tph_c22530 f551f3fb951296df22089e1bade17721 729 Pfam PF03413 Peptidase propeptide and YPEB domain 121 198 4.8E-5 T 14-10-2018 IPR025711 PepSY domain Tph_c06040 1d4b0dfb76e7113696d74a3d963f701b 378 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 373 1.0E-114 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c06040 1d4b0dfb76e7113696d74a3d963f701b 378 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 331 355 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c06040 1d4b0dfb76e7113696d74a3d963f701b 378 Pfam PF01098 Cell cycle protein 14 373 2.9E-99 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c06040 1d4b0dfb76e7113696d74a3d963f701b 378 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 6 376 25.641 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Tph_c21890 0c7e94ec5f8f2cca2bba5dd733d7b656 226 Pfam PF03050 Transposase IS66 family 1 158 1.0E-50 T 14-10-2018 IPR004291 Transposase, IS66 Tph_c24400 c2a1400e1749e919aeb0bf8b714c6dae 171 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 12 170 1.1E-23 T 14-10-2018 IPR013343 CRISPR-associated protein Cas4 Tph_c24400 c2a1400e1749e919aeb0bf8b714c6dae 171 Gene3D G3DSA:3.90.320.10 10 171 3.4E-5 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Tph_c24400 c2a1400e1749e919aeb0bf8b714c6dae 171 Pfam PF01930 Domain of unknown function DUF83 12 171 3.0E-51 T 14-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Tph_c10100 a1e73dcc20d948d81d47a5fa433cf68a 187 Pfam PF02620 Uncharacterized ACR, COG1399 73 184 6.4E-29 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Tph_c18960 ed29497a1dd1518eba671878b6da865d 191 Gene3D G3DSA:3.90.320.10 5 190 7.5E-10 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Tph_c18960 ed29497a1dd1518eba671878b6da865d 191 Pfam PF01930 Domain of unknown function DUF83 7 187 4.8E-19 T 14-10-2018 IPR022765 Dna2/Cas4, domain of unknown function DUF83 Tph_c18960 ed29497a1dd1518eba671878b6da865d 191 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 6 187 3.8E-34 T 14-10-2018 IPR013343 CRISPR-associated protein Cas4 Tph_c27680 4b5c0f491afb593a2b1d6e07d9bdff00 145 Gene3D G3DSA:3.20.20.480 1 142 3.0E-51 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c27680 4b5c0f491afb593a2b1d6e07d9bdff00 145 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 1 140 2.5E-30 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c02490 cdf72937abbe568d380c847c8f2ed5cd 134 Pfam PF05168 HEPN domain 14 125 2.1E-16 T 14-10-2018 IPR007842 HEPN domain Tph_c02490 cdf72937abbe568d380c847c8f2ed5cd 134 Gene3D G3DSA:1.20.120.330 6 131 1.0E-26 T 14-10-2018 Tph_c18880 e0c08f10491838ad63af7842b3d94ac0 214 SUPERFAMILY SSF55811 22 206 5.42E-18 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Tph_c18880 e0c08f10491838ad63af7842b3d94ac0 214 Pfam PF00293 NUDIX domain 21 101 5.6E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Tph_c09540 5df3bcf16d5871146283ea5220fdf4ae 100 Pfam PF11823 Protein of unknown function (DUF3343) 12 77 2.4E-21 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 Tph_c05870 d20dcefcc92f6d7d5a98950a403b850d 401 Pfam PF01636 Phosphotransferase enzyme family 68 317 2.8E-19 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Tph_c05870 d20dcefcc92f6d7d5a98950a403b850d 401 Gene3D G3DSA:3.90.1200.10 162 385 2.2E-22 T 14-10-2018 Tph_c05870 d20dcefcc92f6d7d5a98950a403b850d 401 SUPERFAMILY SSF56112 44 395 2.56E-45 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c03310 4a887d154b67323497742ee57dbe5589 466 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 419 1.8E-58 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c03310 4a887d154b67323497742ee57dbe5589 466 PIRSF PIRSF006603 1 456 1.0E-83 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c03310 4a887d154b67323497742ee57dbe5589 466 Pfam PF01554 MatE 256 405 1.1E-20 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c03310 4a887d154b67323497742ee57dbe5589 466 Pfam PF01554 MatE 23 184 2.7E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 Tph_c18000 73e2060da98dadec1fc6ebdc580316cb 126 Pfam PF08859 DGC domain 10 117 6.7E-27 T 14-10-2018 IPR014958 DGC Tph_c23990 54048dc78b8f521a347063df18a7ebae 213 Gene3D G3DSA:3.50.30.100 2 187 1.5E-62 T 14-10-2018 Tph_c23990 54048dc78b8f521a347063df18a7ebae 213 SUPERFAMILY SSF89562 12 175 2.62E-51 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily Tph_c23990 54048dc78b8f521a347063df18a7ebae 213 Pfam PF03737 Aldolase/RraA 17 164 6.9E-44 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein Tph_c22440 e986362d35fb99952bf2bf18cf94d3ed 230 Pfam PF04474 Protein of unknown function (DUF554) 2 222 3.5E-81 T 14-10-2018 IPR007563 Protein of unknown function DUF554 Tph_c02280 3c40d811f0411bb058f4ce417cfa0c53 495 Pfam PF04932 O-Antigen ligase 287 422 8.9E-14 T 14-10-2018 IPR007016 O-antigen ligase-related Tph_c09270 a1b35070b96052444edaa6db06aa48a1 434 Pfam PF13476 AAA domain 6 264 1.1E-14 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Tph_c09270 a1b35070b96052444edaa6db06aa48a1 434 SUPERFAMILY SSF52540 3 279 1.08E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09270 a1b35070b96052444edaa6db06aa48a1 434 Gene3D G3DSA:3.40.50.300 3 432 8.7E-27 T 14-10-2018 Tph_c09270 a1b35070b96052444edaa6db06aa48a1 434 SUPERFAMILY SSF75712 370 433 4.97E-6 T 14-10-2018 Tph_c05140 941091076ffee13f5cb5ac2948739996 331 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 10 315 1.2E-89 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tph_c05140 941091076ffee13f5cb5ac2948739996 331 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 322 96.331 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tph_c05140 941091076ffee13f5cb5ac2948739996 331 Pfam PF03186 CobD/Cbib protein 10 301 8.0E-103 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Tph_c03040 3e5666b70a0d8fe1d79f50d49d2658d4 73 SUPERFAMILY SSF143011 1 69 6.8E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tph_c03040 3e5666b70a0d8fe1d79f50d49d2658d4 73 Gene3D G3DSA:3.30.2310.20 1 73 3.1E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Tph_c03040 3e5666b70a0d8fe1d79f50d49d2658d4 73 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 9 71 9.1E-6 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Tph_c18160 87c63ccef9a1e11aa4b44308314416e3 401 Pfam PF01837 Homocysteine biosynthesis enzyme, sulfur-incorporation 19 376 8.4E-158 T 14-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation Tph_c18160 87c63ccef9a1e11aa4b44308314416e3 401 ProDom PD011569 METAL-BINDING IRON IRON-SULFUR 4FE-4S FERREDOXIN OXIDOREDUCTASE DOMAIN ELECTRON METHANOGENESIS A 18 314 2.0E-136 T 14-10-2018 IPR002708 Homocysteine biosynthesis enzyme, sulfur-incorporation Tph_c18450 c357878cecb2c2bf10e44d39c182b31d 132 SUPERFAMILY SSF52833 36 129 4.81E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Tph_c18450 c357878cecb2c2bf10e44d39c182b31d 132 Gene3D G3DSA:3.40.30.10 34 131 7.2E-21 T 14-10-2018 Tph_c18830 d0af4456ed4adf40dbc00af188dd73d1 64 SMART SM01078 2 63 2.5E-4 T 14-10-2018 IPR014925 Uncharacterised domain CGGC-dom Tph_c18830 d0af4456ed4adf40dbc00af188dd73d1 64 Pfam PF08821 CGGC domain 12 63 8.7E-12 T 14-10-2018 IPR014925 Uncharacterised domain CGGC-dom Tph_c18860 f4b060d49e7c5a48fb62ab005a64b94f 465 Pfam PF07670 Nucleoside recognition 138 226 4.2E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c18860 f4b060d49e7c5a48fb62ab005a64b94f 465 Pfam PF07670 Nucleoside recognition 309 433 6.3E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c18860 f4b060d49e7c5a48fb62ab005a64b94f 465 Pfam PF07664 Ferrous iron transport protein B C terminus 250 299 5.6E-15 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 Tph_c05450 35ef602b68bb63bda970fcaa32b0fb2c 176 Pfam PF01478 Type IV leader peptidase family 6 107 1.5E-16 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Tph_c05450 35ef602b68bb63bda970fcaa32b0fb2c 176 Gene3D G3DSA:1.20.120.1220 2 120 3.1E-10 T 14-10-2018 Tph_c27570 e9ff6e506e46fd057bb70b721a5d3d1f 295 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 59 284 3.0E-41 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 Tph_c27570 e9ff6e506e46fd057bb70b721a5d3d1f 295 Pfam PF07136 Protein of unknown function (DUF1385) 58 287 1.7E-80 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 Tph_c10900 7f2a47852ee2bc4f342bce5067daa053 121 TIGRFAM TIGR02530 flg_new: flagellar operon protein 30 121 3.2E-33 T 14-10-2018 IPR013367 Flagellar, putative Tph_c10900 7f2a47852ee2bc4f342bce5067daa053 121 Pfam PF12611 Putative flagellar 97 120 8.3E-15 T 14-10-2018 IPR013367 Flagellar, putative Tph_c18200 9d645dbaacc5ea1cdb9dff437d3d2c96 140 Pfam PF12953 Domain of unknown function (DUF3842) 2 130 1.1E-54 T 14-10-2018 IPR024208 Protein of unknown function DUF3842 Tph_c24650 f82f6f7a2151aa33274a05f3cf072a20 133 Pfam PF14276 Domain of unknown function (DUF4363) 13 132 9.7E-35 T 14-10-2018 IPR025373 Protein of unknown function DUF4363 Tph_c20520 ef0f8d98ca6fcb6d717ee9512d403367 351 Pfam PF08735 Putative pyruvate format-lyase activating enzyme (DUF1786) 64 315 3.0E-92 T 14-10-2018 IPR014846 Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme Tph_c20520 ef0f8d98ca6fcb6d717ee9512d403367 351 PIRSF PIRSF029129 5 346 1.1E-105 T 14-10-2018 IPR014846 Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme Tph_c27230 ceb7212ecab6c0c4f39260ce5dda02b3 246 Gene3D G3DSA:3.30.360.40 177 246 4.8E-10 T 14-10-2018 Tph_c27230 ceb7212ecab6c0c4f39260ce5dda02b3 246 SUPERFAMILY SSF143842 100 242 5.75E-18 T 14-10-2018 IPR036209 YwmB-like superfamily Tph_c27230 ceb7212ecab6c0c4f39260ce5dda02b3 246 Pfam PF08680 TATA-box binding 131 246 6.3E-17 T 14-10-2018 IPR014794 TATA-box binding Tph_c15470 34f736b209e81099762d45b7d0535081 292 Pfam PF02754 Cysteine-rich domain 146 236 6.1E-11 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c15470 34f736b209e81099762d45b7d0535081 292 Pfam PF02754 Cysteine-rich domain 4 86 3.4E-10 T 14-10-2018 IPR004017 Cysteine-rich domain Tph_c19140 1d0ceeae73c078af8cd395f3276fa7af 152 SUPERFAMILY SSF53686 28 70 1.06E-5 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Tph_c19140 1d0ceeae73c078af8cd395f3276fa7af 152 Gene3D G3DSA:3.40.50.1100 25 73 4.7E-8 T 14-10-2018 Tph_c10510 b267fea02333f6af1a42deecc5a40879 248 Pfam PF06386 Gas vesicle synthesis protein GvpL/GvpF 7 244 3.9E-60 T 14-10-2018 IPR009430 Gas vesicle protein GvpL/GvpF GO:0031411|GO:0031412 Tph_c10150 1664786f2df19e84a8f1cba83120ddad 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 9.7E-39 T 14-10-2018 IPR007347 Sporulation stage V, protein S Tph_c10150 1664786f2df19e84a8f1cba83120ddad 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 2.0E-26 T 14-10-2018 IPR007347 Sporulation stage V, protein S Tph_c10150 1664786f2df19e84a8f1cba83120ddad 86 Gene3D G3DSA:3.30.110.20 1 86 3.9E-34 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 Tph_c14560 efacf18ec21d1636cf3a53d15dce09d3 98 Gene3D G3DSA:1.20.5.340 15 96 5.5E-5 T 14-10-2018 Tph_c24690 6b17977c704d98134593a5fadfe911c2 472 Pfam PF00860 Permease family 17 431 1.1E-38 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 Tph_c24690 6b17977c704d98134593a5fadfe911c2 472 PIRSF PIRSF005353 1 471 1.3E-163 T 14-10-2018 IPR026033 Purine permease PbuG-like Tph_c09770 63572c5bf68657fb963a4cb67c81ed67 122 SUPERFAMILY SSF158622 1 111 5.76E-28 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily Tph_c09770 63572c5bf68657fb963a4cb67c81ed67 122 Gene3D G3DSA:1.20.1500.10 1 111 1.3E-31 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily Tph_c09770 63572c5bf68657fb963a4cb67c81ed67 122 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 3 106 3.9E-25 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA Tph_c24450 77b8932798127f838474fd6cac51c844 478 Pfam PF09484 CRISPR-associated protein TM1802 (cas_TM1802) 4 474 1.1E-36 T 14-10-2018 IPR013389 CRISPR-associated protein Cas8b Tph_c17550 8b613717731726bf98f6fe045ea16205 601 SUPERFAMILY SSF48239 499 598 6.06E-5 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid Tph_c17550 8b613717731726bf98f6fe045ea16205 601 Gene3D G3DSA:1.50.10.20 376 600 3.0E-5 T 14-10-2018 Tph_c02600 a8e0f031350f1ff14073a9bc72e33e88 441 Pfam PF07282 Putative transposase DNA-binding domain 360 431 1.8E-7 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c02600 a8e0f031350f1ff14073a9bc72e33e88 441 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 302 382 2.4E-10 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Tph_c02670 977ca75a46cdd5404c39ff4ffe656f05 347 Pfam PF00953 Glycosyl transferase family 4 79 230 1.9E-31 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tph_c14740 a82a2d7eaf03f6f30932c3789ab3c53f 374 Gene3D G3DSA:3.40.50.300 4 223 5.4E-36 T 14-10-2018 Tph_c14740 a82a2d7eaf03f6f30932c3789ab3c53f 374 Pfam PF01637 ATPase domain predominantly from Archaea 18 262 7.2E-13 T 14-10-2018 IPR011579 ATPase domain GO:0005524 Tph_c14740 a82a2d7eaf03f6f30932c3789ab3c53f 374 SUPERFAMILY SSF52540 5 289 5.45E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c12090 ff7374d0ed30a4214c6b243bfe232599 256 Pfam PF06114 IrrE N-terminal-like domain 28 151 1.2E-17 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Tph_c07500 159686650fe7351b37ff7e58e61287a1 348 Pfam PF12224 Putative amidoligase enzyme 4 239 2.2E-75 T 14-10-2018 IPR022025 Putative amidoligase enzyme Tph_c11980 5acdf83d0f24f18233b3a37836bde31a 74 Pfam PF11148 Protein of unknown function (DUF2922) 4 70 1.0E-24 T 14-10-2018 IPR021321 Protein of unknown function DUF2922 Tph_c07700 88b4d8f620c17c9fab5985a87af977e3 1051 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 491 497 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Tph_c07700 88b4d8f620c17c9fab5985a87af977e3 1051 SUPERFAMILY SSF53335 461 825 9.97E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c07700 88b4d8f620c17c9fab5985a87af977e3 1051 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 795 815 1.9E-7 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c07700 88b4d8f620c17c9fab5985a87af977e3 1051 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 766 784 1.9E-7 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c07700 88b4d8f620c17c9fab5985a87af977e3 1051 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 487 501 1.9E-7 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 Tph_c07700 88b4d8f620c17c9fab5985a87af977e3 1051 Pfam PF01555 DNA methylase 488 805 5.6E-25 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Tph_c02270 dd9cddb58f53e24b5b6f5cc586df08c9 523 SUPERFAMILY SSF53756 6 178 1.51E-7 T 14-10-2018 Tph_c02270 dd9cddb58f53e24b5b6f5cc586df08c9 523 Pfam PF04230 Polysaccharide pyruvyl transferase 14 172 3.9E-30 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase Tph_c02270 dd9cddb58f53e24b5b6f5cc586df08c9 523 Pfam PF04230 Polysaccharide pyruvyl transferase 319 426 2.8E-11 T 14-10-2018 IPR007345 Polysaccharide pyruvyl transferase Tph_c07070 17927c01451d284d2cb6bc3df4cef23c 412 Pfam PF04346 Ethanolamine utilisation protein, EutH 4 385 1.1E-126 T 14-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Tph_c07070 17927c01451d284d2cb6bc3df4cef23c 412 PIRSF PIRSF019466 2 407 2.8E-128 T 14-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 Tph_c22980 44dbb670ad4a3b7548f8612de75d1dbc 163 Gene3D G3DSA:1.10.10.2600 2 102 9.7E-11 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c28150 022019d0758e424ae2ebb66730766203 351 Pfam PF14257 Domain of unknown function (DUF4349) 157 297 1.6E-11 T 14-10-2018 IPR025645 Domain of unknown function DUF4349 Tph_c21780 3a39747962c19178b38434001c43b672 139 Pfam PF12910 Antitoxin of toxin-antitoxin, RelE / RelB, TA system 1 137 3.2E-54 T 14-10-2018 IPR035424 Antitoxin of toxin-antitoxin, RelE / RelB, TA system Tph_c21780 3a39747962c19178b38434001c43b672 139 Gene3D G3DSA:3.30.160.620 53 138 6.8E-30 T 14-10-2018 Tph_c07510 c328c5dfeeab76f2adf11b1db076c9fc 164 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 8 108 7.2E-12 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like Tph_c07510 c328c5dfeeab76f2adf11b1db076c9fc 164 SUPERFAMILY SSF110857 5 127 7.98E-22 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily Tph_c07510 c328c5dfeeab76f2adf11b1db076c9fc 164 Gene3D G3DSA:3.10.490.10 1 157 2.2E-41 T 14-10-2018 Tph_c27320 78ef4a4f0984fb7aa548a2988e41021f 374 Pfam PF16983 Molybdate transporter of MFS superfamily 26 140 1.1E-33 T 14-10-2018 IPR031563 Molybdate transporter 1/2 GO:0015098|GO:0015689 Tph_c27320 78ef4a4f0984fb7aa548a2988e41021f 374 Pfam PF16983 Molybdate transporter of MFS superfamily 220 334 1.1E-18 T 14-10-2018 IPR031563 Molybdate transporter 1/2 GO:0015098|GO:0015689 Tph_c22320 5857609c644c428dc25019c87c169507 659 Pfam PF01136 Peptidase family U32 85 312 3.2E-67 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tph_c22320 5857609c644c428dc25019c87c169507 659 Pfam PF01136 Peptidase family U32 433 652 6.3E-24 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 Tph_c23190 95f08c527408cdf98c5a660831a8a859 64 Pfam PF16468 Domain of unknown function (DUF5049) 8 63 1.4E-30 T 14-10-2018 IPR032488 Protein of unknown function DUF5049 Tph_c15970 19bb0088b27ef1272fb2d2f47772c1bb 329 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 3 227 8.5E-60 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 Tph_c15970 19bb0088b27ef1272fb2d2f47772c1bb 329 Gene3D G3DSA:3.40.50.11900 233 328 3.2E-8 T 14-10-2018 Tph_c27710 638f8810ec70417d76d9753852b47863 105 Pfam PF09505 Dimethylamine methyltransferase (Dimeth_PyL) 1 100 8.9E-44 T 14-10-2018 IPR012653 Dimethylamine methyltransferase MtbB GO:0008168|GO:0015948 KEGG: 00680+2.1.1.249|MetaCyc: PWY-5248 Tph_c06160 d96578f466bd8859e8e79a3e283ffdd5 97 Pfam PF14104 Domain of unknown function (DUF4277) 2 83 6.2E-8 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c17350 2286303f6ead38e9db928e6379df9f4f 579 SMART SM00327 401 572 5.1E-24 T 14-10-2018 IPR002035 von Willebrand factor, type A Tph_c17350 2286303f6ead38e9db928e6379df9f4f 579 Gene3D G3DSA:3.40.50.410 396 571 1.0E-28 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tph_c17350 2286303f6ead38e9db928e6379df9f4f 579 SUPERFAMILY SSF53300 400 568 3.86E-28 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Tph_c17350 2286303f6ead38e9db928e6379df9f4f 579 Pfam PF00092 von Willebrand factor type A domain 403 563 7.9E-15 T 14-10-2018 IPR002035 von Willebrand factor, type A Tph_c03950 1f30c6ffee2583663cb22a441b6b46a1 193 ProDom PD102989 YKOP PLASMID 11 187 2.0E-12 T 14-10-2018 Tph_c02580 231e57d29d262931f8fed4cca77cc422 262 SUPERFAMILY SSF89550 1 223 1.57E-17 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Tph_c02580 231e57d29d262931f8fed4cca77cc422 262 Gene3D G3DSA:3.20.20.140 1 250 2.5E-79 T 14-10-2018 Tph_c04380 519ffaf5a838ec4727496d71c95f3909 246 SUPERFAMILY SSF56112 26 206 3.44E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Tph_c14180 1df808164f15e9c990ceeeed189f1b85 448 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 86 234 7.5E-12 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Tph_c17930 8c0146c3da6a0e2d370aec4da0b56e19 323 SUPERFAMILY SSF161098 93 305 8.28E-11 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17930 8c0146c3da6a0e2d370aec4da0b56e19 323 Gene3D G3DSA:1.10.3720.10 87 316 8.7E-15 T 14-10-2018 IPR035906 MetI-like superfamily Tph_c17930 8c0146c3da6a0e2d370aec4da0b56e19 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 320 2.3E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Tph_c22940 1f15e2ba8183e0d6039f01b6bf07fd61 754 Pfam PF03235 Protein of unknown function DUF262 10 233 7.0E-22 T 14-10-2018 IPR004919 Domain of unknown function DUF262 Tph_c02150 e07a891249a0b9758d3f05340cefe3cc 377 Pfam PF04015 Domain of unknown function (DUF362) 55 260 8.2E-22 T 14-10-2018 IPR007160 Domain of unknown function DUF362 Tph_c23020 d1ce30e37a07b86b52b5cee6bc98b31d 139 Pfam PF05105 Bacteriophage holin family 18 129 3.9E-41 T 14-10-2018 IPR006480 Bacteriophage holin family Tph_c23020 d1ce30e37a07b86b52b5cee6bc98b31d 139 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 14 138 1.3E-28 T 14-10-2018 IPR006480 Bacteriophage holin family Tph_c07420 743c0ec54b0e8e9363e5f105a07410c6 113 Pfam PF12963 Protein of unknown function (DUF3852) 3 111 1.6E-51 T 14-10-2018 IPR024330 Protein of unknown function DUF3852 Tph_c19990 74a3db17306035839e13db28973b92a9 96 Pfam PF03683 Uncharacterised protein family (UPF0175) 12 85 4.1E-22 T 14-10-2018 IPR005368 Uncharacterised protein family UPF0175 Tph_c00270 30c21ea187a66d81a3af63500829a1d4 229 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 27 217 7.9E-63 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Tph_c00270 30c21ea187a66d81a3af63500829a1d4 229 Pfam PF02096 60Kd inner membrane protein 28 217 3.0E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Tph_c09240 11dd9400005c8b6d3b1b961b28238c7a 328 Pfam PF09376 NurA domain 64 296 5.4E-9 T 14-10-2018 IPR018977 NurA domain Tph_c09240 11dd9400005c8b6d3b1b961b28238c7a 328 SMART SM00933 60 297 2.5E-12 T 14-10-2018 IPR018977 NurA domain Tph_c04900 87c12d76ebecf8984b0b1ab12a722a0d 601 Pfam PF03961 Flagellar Assembly Protein A 92 364 6.3E-79 T 14-10-2018 IPR005646 Flagellar assembly protein A Tph_c02640 06a2cb29c4990261e093be5d66b91949 445 SUPERFAMILY SSF58100 155 346 6.28E-6 T 14-10-2018 Tph_c02640 06a2cb29c4990261e093be5d66b91949 445 Pfam PF13807 G-rich domain on putative tyrosine kinase 332 405 7.5E-10 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain Tph_c02640 06a2cb29c4990261e093be5d66b91949 445 Pfam PF02706 Chain length determinant protein 13 110 2.6E-9 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 Tph_c06200 adfea083c9faa5abba8c4afe05630e2f 269 SUPERFAMILY SSF109998 79 180 4.71E-6 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Tph_c07860 7b139ef3a6ac64e0721a6f9c78b8a0c5 291 Pfam PF07508 Recombinase 22 84 9.0E-13 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 Tph_c07860 7b139ef3a6ac64e0721a6f9c78b8a0c5 291 Gene3D G3DSA:1.10.10.2600 1 106 1.6E-12 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily Tph_c18990 8360c390f73b497fe175087fa342d5cf 118 Pfam PF14110 Domain of unknown function (DUF4282) 12 99 3.8E-20 T 14-10-2018 IPR025557 Protein of unknown function DUF4282 Tph_c28410 9b6f7405e5008d55d82a1c3fba26f884 240 Pfam PF02535 ZIP Zinc transporter 99 234 1.1E-20 T 14-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 Tph_c09290 b5a5d2db46c66262106562b845e287ad 217 SUPERFAMILY SSF52540 5 213 4.97E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c09290 b5a5d2db46c66262106562b845e287ad 217 Gene3D G3DSA:3.40.50.300 1 217 8.2E-23 T 14-10-2018 Tph_c03930 f6c6d1d2c263cab1e1e7c77a1b75fc9f 206 Pfam PF04893 Yip1 domain 9 187 2.3E-15 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 Tph_c16610 5252987f3edfa1bb2e6d7291aaec4be6 414 Pfam PF04932 O-Antigen ligase 217 362 1.8E-14 T 14-10-2018 IPR007016 O-antigen ligase-related Tph_c00740 a7ba708a930fd1778611dd2db29794ee 513 Pfam PF07900 Protein of unknown function (DUF1670) 63 211 1.0E-12 T 14-10-2018 IPR012872 Protein of unknown function DUF1670 Tph_c00740 a7ba708a930fd1778611dd2db29794ee 513 Pfam PF07900 Protein of unknown function (DUF1670) 289 477 2.2E-41 T 14-10-2018 IPR012872 Protein of unknown function DUF1670 Tph_c22030 782db7f8cde742e6a4521db620f4e263 187 Pfam PF08747 Domain of unknown function (DUF1788) 112 169 1.8E-7 T 14-10-2018 IPR014858 Protein of unknown function DUF1788 Tph_c27520 d3ba66cffa8a5cbd761c7727bb5bed6d 193 Pfam PF02659 Putative manganese efflux pump 32 191 1.7E-33 T 14-10-2018 IPR003810 Putative manganese efflux pump Tph_c21360 4420e814704d2d4c72c33a37e237d2e7 661 Pfam PF00361 Proton-conducting membrane transporter 184 466 4.5E-54 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c21360 4420e814704d2d4c72c33a37e237d2e7 661 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 125 150 1.5E-26 T 14-10-2018 Tph_c21360 4420e814704d2d4c72c33a37e237d2e7 661 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 274 295 1.5E-26 T 14-10-2018 Tph_c21360 4420e814704d2d4c72c33a37e237d2e7 661 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 296 322 1.5E-26 T 14-10-2018 Tph_c21360 4420e814704d2d4c72c33a37e237d2e7 661 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 362 374 1.5E-26 T 14-10-2018 Tph_c21360 4420e814704d2d4c72c33a37e237d2e7 661 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 117 170 1.5E-11 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c10920 4146f70e29b08423673b6d95e03f2ead 78 Pfam PF06289 Flagellar protein (FlbD) 2 57 1.8E-26 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like Tph_c09710 e2d64321d242f81737650b2fd1b44149 48 Pfam PF07561 Domain of Unknown Function (DUF1540) 4 45 1.5E-13 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 Tph_c28770 37a1602d93e436bcac2d56c5fb7c016e 282 Pfam PF04468 PSP1 C-terminal conserved region 89 173 2.7E-31 T 14-10-2018 IPR007557 PSP1, C-terminal Tph_c16560 66412f18032bdb7a213f60125641cbe7 207 Pfam PF05137 Fimbrial assembly protein (PilN) 108 202 1.3E-7 T 14-10-2018 IPR007813 Fimbrial assembly PilN Tph_c05520 05d732d8c99f5b74764acf9baeed9079 304 Pfam PF00482 Type II secretion system (T2SS), protein F 168 293 7.5E-19 T 14-10-2018 IPR018076 Type II secretion system F domain Tph_c27970 fa72c580f067303f360b6eb0ec5e48ba 236 Pfam PF07796 Protein of unknown function (DUF1638) 30 195 6.6E-46 T 14-10-2018 IPR012437 Domain of unknown function DUF1638 Tph_c13680 221d604a38f1d9d6fd229b0acea5c90d 160 Pfam PF04306 Protein of unknown function (DUF456) 21 158 6.5E-39 T 14-10-2018 IPR007403 Protein of unknown function DUF456 Tph_c27740 4f049eb1e197c17431ab46216522b13b 91 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 89 1.2E-30 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Tph_c14860 6d0641668e107bfac6d5827911b293c6 63 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 54 1.9E-4 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 Tph_c03260 318a7e2dd3fc04cae3cc0eb03345929d 230 Pfam PF14478 Domain of unknown function (DUF4430) 154 213 9.3E-12 T 14-10-2018 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 Tph_c03260 318a7e2dd3fc04cae3cc0eb03345929d 230 Gene3D G3DSA:3.10.20.490 140 216 1.9E-6 T 14-10-2018 Tph_c21790 79e6a7ccc8c48b51f1ac8d197c56d64b 74 Gene3D G3DSA:3.30.920.30 1 72 1.6E-5 T 14-10-2018 IPR038570 HicA superfamily Tph_c21790 79e6a7ccc8c48b51f1ac8d197c56d64b 74 SUPERFAMILY SSF54786 2 71 1.77E-5 T 14-10-2018 Tph_c07490 2dd0b213f37db4b7fc4519f7a37b4baf 610 Pfam PF01935 Domain of unknown function DUF87 247 296 1.2E-6 T 14-10-2018 IPR002789 Helicase HerA, central domain Tph_c07490 2dd0b213f37db4b7fc4519f7a37b4baf 610 SUPERFAMILY SSF52540 199 594 4.48E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Tph_c02380 bea18ac0da8a049e9bfb30b850d52664 61 Pfam PF12841 YvrJ protein family 2 36 1.8E-19 T 14-10-2018 IPR024419 Protein of unknown function YvrJ Tph_c16600 626e6e8cbdfdef326a4cca22d6d03b05 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 26 3.0E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site Tph_c01140 7c573f14d0be6d80bb07315a0d75dd31 439 Pfam PF13556 PucR C-terminal helix-turn-helix domain 342 400 1.0E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain Tph_c01140 7c573f14d0be6d80bb07315a0d75dd31 439 Gene3D G3DSA:1.10.10.2840 274 404 6.9E-21 T 14-10-2018 Tph_c10370 bb33cfcca7335434d361fc10f9428568 200 Pfam PF12654 Domain of unknown function (DUF3786) 18 193 2.3E-53 T 14-10-2018 IPR024264 Domain of unknown function DUF3786 Tph_c20310 f088fe061d6cb41e42e203bd525c1741 486 Gene3D G3DSA:3.20.20.480 4 486 1.3E-163 T 14-10-2018 IPR038601 MttB-like superfamily KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c20310 f088fe061d6cb41e42e203bd525c1741 486 Pfam PF06253 Trimethylamine methyltransferase (MTTB) 11 483 1.1E-101 T 14-10-2018 IPR010426 Trimethylamine methyltransferase GO:0008168|GO:0015948 KEGG: 00680+2.1.1.250|MetaCyc: PWY-5250 Tph_c06720 0a2c5eb9cd35bb486cae1b1115374618 223 Pfam PF04367 Protein of unknown function (DUF502) 56 159 6.1E-35 T 14-10-2018 IPR007462 Protein of unknown function DUF502 Tph_c24540 c99ba740445bf2c016c4318548e02d06 193 Pfam PF03787 RAMP superfamily 12 185 1.8E-19 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein Tph_c02000 e7c071dc9d04d14c2a1a31224f15b5c5 428 PIRSF PIRSF500217 1 427 4.5E-118 T 14-10-2018 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 Tph_c02000 e7c071dc9d04d14c2a1a31224f15b5c5 428 PIRSF PIRSF016636 1 428 9.2E-116 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB Tph_c02000 e7c071dc9d04d14c2a1a31224f15b5c5 428 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 170 375 9.1E-24 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT Tph_c17470 e333258e481287aef4e0670f4554d91b 110 Pfam PF00872 Transposase, Mutator family 26 109 6.0E-20 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Tph_c09160 28663105d791978acb4f0491bd8b2beb 253 Pfam PF16258 Domain of unknown function (DUF4912) 85 202 1.4E-36 T 14-10-2018 IPR032585 Protein of unknown function DUF4912 Tph_c02720 c3c6551a78f81f4ad839abd38a6708c0 499 SUPERFAMILY SSF52402 87 425 1.06E-16 T 14-10-2018 Tph_c02720 c3c6551a78f81f4ad839abd38a6708c0 499 Pfam PF00733 Asparagine synthase 108 196 2.0E-8 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 Tph_c02720 c3c6551a78f81f4ad839abd38a6708c0 499 Gene3D G3DSA:3.40.50.620 95 324 1.2E-15 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Tph_c22010 f5249db92ddb4e5170bae172a9dcce5c 1134 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 479 491 1.8E-9 T 14-10-2018 Tph_c22010 f5249db92ddb4e5170bae172a9dcce5c 1134 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 512 536 1.8E-9 T 14-10-2018 Tph_c22010 f5249db92ddb4e5170bae172a9dcce5c 1134 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 312 1.8E-9 T 14-10-2018 Tph_c22010 f5249db92ddb4e5170bae172a9dcce5c 1134 SUPERFAMILY SSF53335 80 592 3.14E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Tph_c17560 0dd0674495cf53781361b7f3242946aa 304 SUPERFAMILY SSF53098 62 253 3.87E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c25110 6e1c537a99d6c663d4b20d0c8cadf5dd 108 Pfam PF09919 Uncharacterized conserved protein (DUF2149) 20 102 1.7E-7 T 14-10-2018 IPR018676 Protein of unknown function DUF2149 Tph_c28020 b6ffbdddc511512bca913eec584f0109 347 Pfam PF00395 S-layer homology domain 187 225 0.0096 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28020 b6ffbdddc511512bca913eec584f0109 347 Pfam PF00395 S-layer homology domain 78 118 6.1E-11 T 14-10-2018 IPR001119 S-layer homology domain Tph_c28020 b6ffbdddc511512bca913eec584f0109 347 Pfam PF00395 S-layer homology domain 244 287 1.8E-11 T 14-10-2018 IPR001119 S-layer homology domain Tph_c01410 42273554a36134a8771078319e210a9d 231 Pfam PF14104 Domain of unknown function (DUF4277) 18 119 1.6E-15 T 14-10-2018 IPR025457 Domain of unknown function DUF4277 Tph_c07350 7faee756c77fd82b1cdd495d1d13fabf 131 Pfam PF14208 Domain of unknown function (DUF4320) 20 131 5.7E-42 T 14-10-2018 IPR025469 Protein of unknown function DUF4320 Tph_c12350 e28f68dd2a0ae20592814043ad8a5437 479 Pfam PF08486 Stage II sporulation protein 130 223 1.9E-20 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Tph_c12350 e28f68dd2a0ae20592814043ad8a5437 479 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 134 464 2.3E-61 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 Tph_c04960 8fcf68cc7d579f4b32984c745108ef8a 176 Pfam PF05991 YacP-like NYN domain 5 171 1.5E-46 T 14-10-2018 IPR010298 Protein of unknown function DUF901 Tph_c10890 76d27a0e5c038819482ea2329483a0d4 147 Pfam PF03963 Flagellar hook capping protein - N-terminal region 8 70 1.2E-16 T 14-10-2018 IPR005648 Flagellar hook capping protein Tph_c25130 c8950f8c9bf46a76818b2db82165fd38 470 Pfam PF02514 CobN/Magnesium Chelatase 43 331 1.3E-52 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Tph_c02310 968687e4960d102d9adcf863a44ca2dc 354 Pfam PF00953 Glycosyl transferase family 4 74 227 1.8E-40 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Tph_c10540 112e8f1d13f56797ccfe9e1d9a2950dd 76 Pfam PF00741 Gas vesicle protein 10 48 3.4E-15 T 14-10-2018 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 Tph_c28060 1ba239171673e77c2089f0f3b43e3ba8 176 SUPERFAMILY SSF48317 18 114 7.59E-5 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Tph_c28060 1ba239171673e77c2089f0f3b43e3ba8 176 Pfam PF02681 Divergent PAP2 family 41 168 2.5E-33 T 14-10-2018 IPR003832 Protein of unknown function DUF212 Tph_c09310 983916ca23e1694d99ced0d57fa7c125 480 Pfam PF06782 Uncharacterised protein family (UPF0236) 25 437 5.6E-52 T 14-10-2018 IPR009620 Uncharacterised protein family UPF0236 Tph_c18890 d0488dbee842073a2bc5a9fcd78741ec 316 Pfam PF02517 CAAX protease self-immunity 164 258 3.5E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Tph_c15930 62c2e5cb429cf28ca1a8849df56f6e62 216 Pfam PF02163 Peptidase family M50 125 160 1.2E-6 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Tph_c15850 ea288d5f714035ef24adf759590c630e 178 Pfam PF07670 Nucleoside recognition 47 146 5.3E-6 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c19250 16ee900f705b49a26da5322587514d5c 162 Pfam PF11823 Protein of unknown function (DUF3343) 1 56 5.4E-13 T 14-10-2018 IPR021778 Domain of unknown function DUF3343 Tph_c17660 cde76be0f4e3d814747b4dae4edc0fa9 159 SUPERFAMILY SSF81593 43 144 7.46E-6 T 14-10-2018 Tph_c17660 cde76be0f4e3d814747b4dae4edc0fa9 159 Pfam PF05168 HEPN domain 42 143 1.3E-4 T 14-10-2018 IPR007842 HEPN domain Tph_c18820 84f38fd01d70e73f507f8d87fdf4d500 263 Pfam PF06691 Protein of unknown function (DUF1189) 13 255 7.2E-63 T 14-10-2018 IPR009574 Protein of unknown function DUF1189 Tph_c09760 7982fab80549e2f9c8b5241d832b67e9 225 Pfam PF01810 LysE type translocator 16 216 6.4E-31 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 Tph_c15860 77e26f7480d435c66b882fcef671915b 198 Pfam PF07670 Nucleoside recognition 43 149 5.0E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 Tph_c00650 ac50fb6288b609179f9d059fb758f1b5 237 Pfam PF02674 Colicin V production protein 4 186 6.1E-13 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Tph_c02180 494e75ec4bbdfe34c897248e0a6a71f9 593 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 115 253 3.7E-12 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Tph_c05460 c8397c46351242d801ece472e7a7130c 130 Pfam PF07811 TadE-like protein 10 52 3.4E-19 T 14-10-2018 IPR012495 TadE-like Tph_c24150 d4f844c2db62cb42798c5d2dd56bfa13 109 Pfam PF12441 CopG antitoxin of type II toxin-antitoxin system 17 99 2.7E-11 T 14-10-2018 IPR022148 CopG antitoxin Tph_c02300 07940f6f167b89ded321b36973e9765a 162 Pfam PF14221 Domain of unknown function (DUF4330) 3 157 2.4E-37 T 14-10-2018 IPR025480 Protein of unknown function DUF4330 Tph_c09360 d581ef6b4b73b669cb95f43d48b4d265 66 Pfam PF09413 Putative prokaryotic signal transducing protein 2 62 2.7E-7 T 14-10-2018 IPR018551 Domain of unknown function DUF2007 Tph_c26940 8522732e21e09e72a75961e9241e89d8 146 Pfam PF04657 Putative inner membrane exporter, YdcZ 7 141 7.9E-38 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ Tph_c29200 566b402e8cd85002de4d3315cab1c98d 81 SUPERFAMILY SSF53098 12 64 2.47E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Tph_c09440 a71589b61792abbb0db725aa1d4b9c51 62 Pfam PF10133 Predicted RNA-binding protein 1 60 4.7E-25 T 14-10-2018 IPR019300 RNA-binding protein, predicted Tph_c10530 266b545e5358ad56bafa51dc7ff43c4a 103 Pfam PF05121 Gas vesicle protein K 3 85 1.7E-18 T 14-10-2018 IPR007805 Gas vesicle protein GvpK GO:0031412 Tph_c23740 159da891e2226761d1dceb387b911e73 299 Pfam PF02653 Branched-chain amino acid transport system / permease component 15 283 1.4E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tph_c21350 d081bafff7b0f5562bb24c33908460bc 286 Pfam PF00146 NADH dehydrogenase 8 277 4.4E-40 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Tph_c20150 37a0ecca42cb10f5a67bae220112d2e0 45 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 8 41 7.3E-9 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 Tph_c13640 1dd713db73ccd110fa6e957215c23720 230 SUPERFAMILY SSF53187 5 67 4.39E-5 T 14-10-2018 Tph_c00460 f1806983e6b6c8f7f1c093f1c30c80fd 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 275 3.4E-43 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tph_c00470 c3e90d2ea570cb230522e041bc5af2a7 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 284 6.8E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Tph_c03240 dfea0bdc09855fd6202bce6cb490bf55 309 Pfam PF02361 Cobalt transport protein 19 223 1.6E-10 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component Tph_c03470 4821c9c970cc2571a17b5266a2596b98 369 Pfam PF01955 Adenosylcobinamide amidohydrolase 23 229 1.4E-65 T 14-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ Tph_c17020 5e0dad2ad02a910c79291849276a220c 313 Pfam PF13182 Protein of unknown function (DUF4007) 19 303 1.6E-91 T 14-10-2018 IPR025248 Domain of unknown function DUF4007 Tph_c28980 2adb3c0424dc52a3fdbd3daab7c1ca65 85 Pfam PF10704 Protein of unknown function (DUF2508) 21 78 1.1E-9 T 14-10-2018 IPR019644 Protein of unknown function DUF2508 Tph_c24080 9713f40c4db6ba9af15135a614c073a7 73 Pfam PF04070 Domain of unknown function (DUF378) 5 62 1.4E-24 T 14-10-2018 IPR007211 Protein of unknown function DUF378 Tph_c17250 f1374ea8c7e08029176f3f21a66d720a 341 Pfam PF01594 AI-2E family transporter 8 331 6.5E-60 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like