locus-tag class description Tmar_0001 PF00308 Bacterial dnaA protein Tmar_0001 PF11638 DnaA N-terminal domain Tmar_0001 PF08299 Bacterial dnaA protein helix-turn-helix Tmar_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Tmar_0002 PF02767 DNA polymerase III beta subunit, central domain Tmar_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Tmar_0003 PF02463 RecF/RecN/SMC N terminal domain Tmar_0006 PF00204 DNA gyrase B Tmar_0006 PF01751 Toprim domain Tmar_0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_0006 PF00986 DNA gyrase B subunit, carboxyl terminus Tmar_0007 PF00521 DNA gyrase/topoisomerase IV, subunit A Tmar_0007 PF03989 DNA gyrase C-terminal domain, beta-propeller Tmar_0008 PF00586 AIR synthase related protein, N-terminal domain Tmar_0008 PF02769 AIR synthase related protein, C-terminal domain Tmar_0009 PF02403 Seryl-tRNA synthetase N-terminal domain Tmar_0009 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmar_0021 PF09588 YqaJ-like viral recombinase domain Tmar_0022 PF03837 RecT family Tmar_0023 PF03330 Lytic transglycolase Tmar_0030 PF01695 IstB-like ATP binding protein Tmar_0037 PF04860 Phage portal protein Tmar_0057 PF05105 Bacteriophage holin family Tmar_0058 PF01520 N-acetylmuramoyl-L-alanine amidase Tmar_0066 PF03323 Bacillus/Clostridium GerA spore germination protein Tmar_0067 PF05504 Spore germination B3/ GerAC like, C-terminal Tmar_0070 PF06177 QueT transporter Tmar_0071 PF14437 MafB19-like deaminase Tmar_0072 PF12169 DNA polymerase III subunits gamma and tau domain III Tmar_0073 PF02575 YbaB/EbfC DNA-binding family Tmar_0074 PF13662 Toprim domain Tmar_0074 PF02132 RecR protein Tmar_0074 PF00633 Helix-hairpin-helix motif Tmar_0077 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tmar_0078 PF02223 Thymidylate kinase Tmar_0079 PF06153 Cyclic-di-AMP receptor Tmar_0080 PF09115 DNA polymerase III, delta subunit, C terminal Tmar_0081 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmar_0082 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tmar_0082 PF18277 AbrB C-terminal domain Tmar_0083 PF08264 Anticodon-binding domain of tRNA Tmar_0083 PF01588 Putative tRNA binding domain Tmar_0083 PF09334 tRNA synthetases class I (M) Tmar_0084 PF01026 TatD related DNase Tmar_0085 PF00398 Ribosomal RNA adenine dimethylase Tmar_0086 PF04308 Ribonuclease H-like Tmar_0089 PF00288 GHMP kinases N terminal domain Tmar_0089 PF08544 GHMP kinases C terminal Tmar_0090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tmar_0091 PF00156 Phosphoribosyl transferase domain Tmar_0091 PF09182 Bacterial purine repressor, N-terminal Tmar_0092 PF00291 Pyridoxal-phosphate dependent enzyme Tmar_0092 PF13291 ACT domain Tmar_0093 PF04026 SpoVG Tmar_0094 PF00578 AhpC/TSA family Tmar_0096 PF12804 MobA-like NTP transferase domain Tmar_0096 PF00132 Bacterial transferase hexapeptide (six repeats) Tmar_0097 PF14572 Phosphoribosyl synthetase-associated domain Tmar_0097 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tmar_0098 PF01386 Ribosomal L25p family Tmar_0098 PF14693 Ribosomal protein TL5, C-terminal domain Tmar_0099 PF01195 Peptidyl-tRNA hydrolase Tmar_0100 PF02559 CarD-like/TRCF domain Tmar_0100 PF00270 DEAD/DEAH box helicase Tmar_0100 PF03461 TRCF domain Tmar_0100 PF17757 UvrB interaction domain Tmar_0100 PF00271 Helicase conserved C-terminal domain Tmar_0101 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tmar_0101 PF15714 Stage V sporulation protein T C-terminal, transcription factor Tmar_0102 PF03819 MazG nucleotide pyrophosphohydrolase domain Tmar_0103 PF00216 Bacterial DNA-binding protein Tmar_0109 PF02690 Na+/Pi-cotransporter Tmar_0111 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmar_0112 PF01613 Flavin reductase like domain Tmar_0113 PF01592 NifU-like N terminal domain Tmar_0114 PF00266 Aminotransferase class-V Tmar_0115 PF01458 Uncharacterized protein family (UPF0051) Tmar_0116 PF00005 ABC transporter Tmar_0117 PF05343 M42 glutamyl aminopeptidase Tmar_0118 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Tmar_0120 PF02910 Fumarate reductase flavoprotein C-term Tmar_0120 PF00890 FAD binding domain Tmar_0121 PF13085 2Fe-2S iron-sulfur cluster binding domain Tmar_0122 PF01923 Cobalamin adenosyltransferase Tmar_0124 PF00892 EamA-like transporter family Tmar_0125 PF01658 Myo-inositol-1-phosphate synthase Tmar_0126 PF12804 MobA-like NTP transferase domain Tmar_0126 PF01066 CDP-alcohol phosphatidyltransferase Tmar_0127 PF02586 SOS response associated peptidase (SRAP) Tmar_0131 PF08704 tRNA methyltransferase complex GCD14 subunit Tmar_0133 PF11734 TilS substrate C-terminal domain Tmar_0133 PF01171 PP-loop family Tmar_0134 PF06480 FtsH Extracellular Tmar_0134 PF17862 AAA+ lid domain Tmar_0134 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_0134 PF01434 Peptidase family M41 Tmar_0135 PF01743 Poly A polymerase head domain Tmar_0135 PF12627 Probable RNA and SrmB- binding site of polymerase A Tmar_0135 PF13735 tRNA nucleotidyltransferase domain 2 putative Tmar_0136 PF00557 Metallopeptidase family M24 Tmar_0136 PF01321 Creatinase/Prolidase N-terminal domain Tmar_0137 PF00221 Aromatic amino acid lyase Tmar_0138 PF00809 Pterin binding enzyme Tmar_0139 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tmar_0140 PF03576 Peptidase family S58 Tmar_0141 PF03309 Type III pantothenate kinase Tmar_0142 PF02577 Bifunctional nuclease Tmar_0144 PF03449 Transcription elongation factor, N-terminal Tmar_0144 PF01272 Transcription elongation factor, GreA/GreB, C-term Tmar_0145 PF00152 tRNA synthetases class II (D, K and N) Tmar_0145 PF01336 OB-fold nucleic acid binding domain Tmar_0146 PF00485 Phosphoribulokinase / Uridine kinase family Tmar_0149 PF00082 Subtilase family Tmar_0149 PF05922 Peptidase inhibitor I9 Tmar_0150 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tmar_0151 PF07498 Rho termination factor, N-terminal domain Tmar_0151 PF07497 Rho termination factor, RNA-binding domain Tmar_0151 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmar_0153 PF01197 Ribosomal protein L31 Tmar_0154 PF07136 Protein of unknown function (DUF1385) Tmar_0155 PF03462 PCRF domain Tmar_0155 PF00472 RF-1 domain Tmar_0156 PF17827 PrmC N-terminal domain Tmar_0156 PF05175 Methyltransferase small domain Tmar_0157 PF03481 Putative GTP-binding controlling metal-binding Tmar_0157 PF01300 Telomere recombination Tmar_0158 PF02502 Ribose/Galactose Isomerase Tmar_0159 PF00953 Glycosyl transferase family 4 Tmar_0160 PF02350 UDP-N-acetylglucosamine 2-epimerase Tmar_0163 PF00119 ATP synthase A chain Tmar_0164 PF00137 ATP synthase subunit C Tmar_0167 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmar_0167 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmar_0167 PF00306 ATP synthase alpha/beta chain, C terminal domain Tmar_0168 PF00231 ATP synthase Tmar_0169 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmar_0169 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmar_0170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tmar_0170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Tmar_0171 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tmar_0172 PF08486 Stage II sporulation protein Tmar_0174 PF12116 Stage III sporulation protein D Tmar_0176 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmar_0176 PF00460 Flagella basal body rod protein Tmar_0177 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmar_0177 PF00460 Flagella basal body rod protein Tmar_0178 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Tmar_0178 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Tmar_0179 PF07977 FabA-like domain Tmar_0180 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tmar_0180 PF01138 3' exoribonuclease family, domain 1 Tmar_0180 PF00575 S1 RNA binding domain Tmar_0180 PF00013 KH domain Tmar_0180 PF03725 3' exoribonuclease family, domain 2 Tmar_0183 PF00700 Bacterial flagellin C-terminal helical region Tmar_0183 PF00669 Bacterial flagellin N-terminal helical region Tmar_0185 PF02465 Flagellar hook-associated protein 2 N-terminus Tmar_0185 PF07195 Flagellar hook-associated protein 2 C-terminus Tmar_0188 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tmar_0188 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tmar_0188 PF02772 S-adenosylmethionine synthetase, central domain Tmar_0190 PF00990 Diguanylate cyclase, GGDEF domain Tmar_0190 PF17158 Membrane-associated sensor, integral membrane domain Tmar_0191 PF00156 Phosphoribosyl transferase domain Tmar_0194 PF00460 Flagella basal body rod protein Tmar_0194 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmar_0195 PF00700 Bacterial flagellin C-terminal helical region Tmar_0195 PF07196 Flagellin hook IN motif Tmar_0195 PF00669 Bacterial flagellin N-terminal helical region Tmar_0196 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmar_0196 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmar_0196 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmar_0196 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmar_0197 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tmar_0197 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Tmar_0199 PF00072 Response regulator receiver domain Tmar_0201 PF07516 SecA Wing and Scaffold domain Tmar_0201 PF01043 SecA preprotein cross-linking domain Tmar_0201 PF07517 SecA DEAD-like domain Tmar_0201 PF02810 SEC-C motif Tmar_0203 PF00005 ABC transporter Tmar_0204 PF18075 FtsX extracellular domain Tmar_0204 PF02687 FtsX-like permease family Tmar_0205 PF01551 Peptidase family M23 Tmar_0205 PF08525 Opacity-associated protein A N-terminal motif Tmar_0205 PF01476 LysM domain Tmar_0206 PF03572 Peptidase family S41 Tmar_0206 PF00595 PDZ domain Tmar_0208 PF12344 Ultra-violet resistance protein B Tmar_0208 PF17757 UvrB interaction domain Tmar_0208 PF04851 Type III restriction enzyme, res subunit Tmar_0208 PF02151 UvrB/uvrC motif Tmar_0208 PF00271 Helicase conserved C-terminal domain Tmar_0209 PF17760 UvrA interaction domain Tmar_0209 PF17755 UvrA DNA-binding domain Tmar_0210 PF01594 AI-2E family transporter Tmar_0211 PF04055 Radical SAM superfamily Tmar_0212 PF02151 UvrB/uvrC motif Tmar_0212 PF01541 GIY-YIG catalytic domain Tmar_0212 PF08459 UvrC Helix-hairpin-helix N-terminal Tmar_0213 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_0213 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tmar_0213 PF00205 Thiamine pyrophosphate enzyme, central domain Tmar_0215 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV Tmar_0216 PF01220 Dehydroquinase class II Tmar_0217 PF01761 3-dehydroquinate synthase Tmar_0218 PF01264 Chorismate synthase Tmar_0219 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Tmar_0219 PF01488 Shikimate / quinate 5-dehydrogenase Tmar_0219 PF08501 Shikimate dehydrogenase substrate binding domain Tmar_0220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tmar_0221 PF02153 Prephenate dehydrogenase Tmar_0222 PF00793 DAHP synthetase I family Tmar_0222 PF18152 DAHP synthase ferredoxin-like domain Tmar_0223 PF07736 Chorismate mutase type I Tmar_0225 PF00571 CBS domain Tmar_0225 PF01769 Divalent cation transporter Tmar_0225 PF03448 MgtE intracellular N domain Tmar_0227 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmar_0227 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmar_0231 PF03668 P-loop ATPase protein family Tmar_0232 PF01933 Uncharacterised protein family UPF0052 Tmar_0233 PF10298 WhiA N-terminal LAGLIDADG-like domain Tmar_0233 PF14527 WhiA LAGLIDADG-like domain Tmar_0233 PF02650 WhiA C-terminal HTH domain Tmar_0234 PF00348 Polyprenyl synthetase Tmar_0235 PF02629 CoA binding domain Tmar_0235 PF06971 Putative DNA-binding protein N-terminus Tmar_0236 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tmar_0238 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmar_0238 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmar_0238 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmar_0238 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmar_0239 PF01380 SIS domain Tmar_0241 PF07702 UTRA domain Tmar_0241 PF00392 Bacterial regulatory proteins, gntR family Tmar_0242 PF00294 pfkB family carbohydrate kinase Tmar_0243 PF01156 Inosine-uridine preferring nucleoside hydrolase Tmar_0244 PF01791 DeoC/LacD family aldolase Tmar_0245 PF00753 Metallo-beta-lactamase superfamily Tmar_0245 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tmar_0246 PF02073 Thermophilic metalloprotease (M29) Tmar_0251 PF00581 Rhodanese-like domain Tmar_0252 PF00581 Rhodanese-like domain Tmar_0252 PF00753 Metallo-beta-lactamase superfamily Tmar_0253 PF00581 Rhodanese-like domain Tmar_0253 PF01206 Sulfurtransferase TusA Tmar_0254 PF13686 DsrE/DsrF/DrsH-like family Tmar_0255 PF01925 Sulfite exporter TauE/SafE Tmar_0257 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tmar_0258 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tmar_0259 PF01648 4'-phosphopantetheinyl transferase superfamily Tmar_0260 PF01256 Carbohydrate kinase Tmar_0260 PF03853 YjeF-related protein N-terminus Tmar_0261 PF00842 Alanine racemase, C-terminal domain Tmar_0261 PF01168 Alanine racemase, N-terminal domain Tmar_0263 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Tmar_0265 PF03167 Uracil DNA glycosylase superfamily Tmar_0266 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tmar_0267 PF00814 Glycoprotease family Tmar_0268 PF00583 Acetyltransferase (GNAT) family Tmar_0269 PF00814 Glycoprotease family Tmar_0270 PF14602 Hexapeptide repeat of succinyl-transferase Tmar_0271 PF01225 Mur ligase family, catalytic domain Tmar_0271 PF02875 Mur ligase family, glutamate ligase domain Tmar_0271 PF08245 Mur ligase middle domain Tmar_0272 PF00571 CBS domain Tmar_0272 PF00478 IMP dehydrogenase / GMP reductase domain Tmar_0273 PF08245 Mur ligase middle domain Tmar_0273 PF02875 Mur ligase family, glutamate ligase domain Tmar_0274 PF02803 Thiolase, C-terminal domain Tmar_0274 PF00108 Thiolase, N-terminal domain Tmar_0275 PF03453 MoeA N-terminal region (domain I and II) Tmar_0275 PF03454 MoeA C-terminal region (domain IV) Tmar_0275 PF00994 Probable molybdopterin binding domain Tmar_0276 PF01967 MoaC family Tmar_0277 PF00994 Probable molybdopterin binding domain Tmar_0277 PF01967 MoaC family Tmar_0278 PF00166 Chaperonin 10 Kd subunit Tmar_0279 PF00118 TCP-1/cpn60 chaperonin family Tmar_0282 PF00117 Glutamine amidotransferase class-I Tmar_0282 PF00958 GMP synthase C terminal domain Tmar_0284 PF13426 PAS domain Tmar_0284 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_0284 PF00512 His Kinase A (phospho-acceptor) domain Tmar_0284 PF13188 PAS domain Tmar_0284 PF00989 PAS fold Tmar_0285 PF00580 UvrD/REP helicase N-terminal domain Tmar_0285 PF13361 UvrD-like helicase C-terminal domain Tmar_0286 PF00533 BRCA1 C Terminus (BRCT) domain Tmar_0286 PF01653 NAD-dependent DNA ligase adenylation domain Tmar_0286 PF03120 NAD-dependent DNA ligase OB-fold domain Tmar_0286 PF12826 Helix-hairpin-helix motif Tmar_0286 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tmar_0287 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_0288 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0289 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0289 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_0290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_0290 PF00005 ABC transporter Tmar_0291 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_0291 PF00005 ABC transporter Tmar_0292 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_0293 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0294 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0294 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_0295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_0295 PF00005 ABC transporter Tmar_0296 PF00005 ABC transporter Tmar_0296 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_0297 PF07687 Peptidase dimerisation domain Tmar_0297 PF01546 Peptidase family M20/M25/M40 Tmar_0298 PF01321 Creatinase/Prolidase N-terminal domain Tmar_0298 PF00557 Metallopeptidase family M24 Tmar_0299 PF02686 Glu-tRNAGln amidotransferase C subunit Tmar_0300 PF01425 Amidase Tmar_0301 PF02934 GatB/GatE catalytic domain Tmar_0301 PF02637 GatB domain Tmar_0302 PF00873 AcrB/AcrD/AcrF family Tmar_0303 PF01884 PcrB family Tmar_0304 PF01063 Amino-transferase class IV Tmar_0306 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_0307 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Tmar_0308 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tmar_0309 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tmar_0310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tmar_0311 PF00146 NADH dehydrogenase Tmar_0312 PF12838 4Fe-4S dicluster domain Tmar_0313 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Tmar_0314 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tmar_0315 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tmar_0315 PF00361 Proton-conducting membrane transporter Tmar_0315 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus Tmar_0316 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus Tmar_0316 PF00361 Proton-conducting membrane transporter Tmar_0317 PF00361 Proton-conducting membrane transporter Tmar_0319 PF00999 Sodium/hydrogen exchanger family Tmar_0321 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Tmar_0321 PF00034 Cytochrome c Tmar_0321 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Tmar_0325 PF00033 Cytochrome b/b6/petB Tmar_0326 PF03477 ATP cone domain Tmar_0327 PF03477 ATP cone domain Tmar_0327 PF00317 Ribonucleotide reductase, all-alpha domain Tmar_0327 PF02867 Ribonucleotide reductase, barrel domain Tmar_0328 PF00892 EamA-like transporter family Tmar_0330 PF10776 Protein of unknown function (DUF2600) Tmar_0332 PF00156 Phosphoribosyl transferase domain Tmar_0335 PF07726 ATPase family associated with various cellular activities (AAA) Tmar_0335 PF17863 AAA lid domain Tmar_0337 PF00578 AhpC/TSA family Tmar_0341 PF00665 Integrase core domain Tmar_0341 PF02796 Helix-turn-helix domain of resolvase Tmar_0346 PF06207 Protein of unknown function (DUF1002) Tmar_0347 PF09335 SNARE associated Golgi protein Tmar_0349 PF08486 Stage II sporulation protein Tmar_0352 PF12706 Beta-lactamase superfamily domain Tmar_0354 PF08245 Mur ligase middle domain Tmar_0354 PF02875 Mur ligase family, glutamate ligase domain Tmar_0358 PF00589 Phage integrase family Tmar_0358 PF02899 Phage integrase, N-terminal SAM-like domain Tmar_0366 PF01208 Uroporphyrinogen decarboxylase (URO-D) Tmar_0367 PF06491 Disulphide isomerase Tmar_0369 PF01925 Sulfite exporter TauE/SafE Tmar_0370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmar_0370 PF14579 Helix-hairpin-helix motif Tmar_0370 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmar_0370 PF02811 PHP domain Tmar_0371 PF04608 Phosphatidylglycerophosphatase A Tmar_0373 PF02548 Ketopantoate hydroxymethyltransferase Tmar_0374 PF02569 Pantoate-beta-alanine ligase Tmar_0375 PF04285 Protein of unknown function (DUF444) Tmar_0376 PF04293 SpoVR like protein Tmar_0377 PF06798 PrkA serine protein kinase C-terminal domain Tmar_0377 PF08298 PrkA AAA domain Tmar_0380 PF00365 Phosphofructokinase Tmar_0381 PF00391 PEP-utilising enzyme, mobile domain Tmar_0381 PF00224 Pyruvate kinase, barrel domain Tmar_0381 PF02887 Pyruvate kinase, alpha/beta domain Tmar_0382 PF01883 Iron-sulfur cluster assembly protein Tmar_0382 PF10609 NUBPL iron-transfer P-loop NTPase Tmar_0383 PF12146 Serine aminopeptidase, S33 Tmar_0384 PF13840 ACT domain Tmar_0384 PF01842 ACT domain Tmar_0384 PF00696 Amino acid kinase family Tmar_0386 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tmar_0390 PF00106 short chain dehydrogenase Tmar_0391 PF02803 Thiolase, C-terminal domain Tmar_0391 PF00108 Thiolase, N-terminal domain Tmar_0392 PF02371 Transposase IS116/IS110/IS902 family Tmar_0392 PF01548 Transposase Tmar_0394 PF13193 AMP-binding enzyme C-terminal domain Tmar_0394 PF00501 AMP-binding enzyme Tmar_0397 PF00107 Zinc-binding dehydrogenase Tmar_0397 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_0398 PF16912 Glucose dehydrogenase C-terminus Tmar_0398 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_0399 PF07883 Cupin domain Tmar_0402 PF02628 Cytochrome oxidase assembly protein Tmar_0403 PF01040 UbiA prenyltransferase family Tmar_0404 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Tmar_0405 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tmar_0406 PF00510 Cytochrome c oxidase subunit III Tmar_0407 PF00510 Cytochrome c oxidase subunit III Tmar_0410 PF00188 Cysteine-rich secretory protein family Tmar_0414 PF04542 Sigma-70 region 2 Tmar_0414 PF08281 Sigma-70, region 4 Tmar_0422 PF00476 DNA polymerase family A Tmar_0422 PF01367 5'-3' exonuclease, C-terminal SAM fold Tmar_0422 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tmar_0423 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Tmar_0423 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Tmar_0423 PF06827 Zinc finger found in FPG and IleRS Tmar_0425 PF07486 Cell Wall Hydrolase Tmar_0425 PF01471 Putative peptidoglycan binding domain Tmar_0426 PF07486 Cell Wall Hydrolase Tmar_0426 PF01471 Putative peptidoglycan binding domain Tmar_0428 PF01121 Dephospho-CoA kinase Tmar_0431 PF00809 Pterin binding enzyme Tmar_0434 PF01520 N-acetylmuramoyl-L-alanine amidase Tmar_0437 PF00474 Sodium:solute symporter family Tmar_0438 PF04397 LytTr DNA-binding domain Tmar_0438 PF00072 Response regulator receiver domain Tmar_0439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_0439 PF07694 5TMR of 5TMR-LYT Tmar_0439 PF13492 GAF domain Tmar_0439 PF06580 Histidine kinase Tmar_0440 PF00474 Sodium:solute symporter family Tmar_0442 PF16177 Acetyl-coenzyme A synthetase N-terminus Tmar_0442 PF00501 AMP-binding enzyme Tmar_0442 PF13193 AMP-binding enzyme C-terminal domain Tmar_0443 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tmar_0443 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tmar_0443 PF01000 RNA polymerase Rpb3/RpoA insert domain Tmar_0444 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain Tmar_0444 PF01380 SIS domain Tmar_0448 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tmar_0448 PF02742 Iron dependent repressor, metal binding and dimerisation domain Tmar_0451 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tmar_0453 PF13411 MerR HTH family regulatory protein Tmar_0454 PF00120 Glutamine synthetase, catalytic domain Tmar_0454 PF03951 Glutamine synthetase, beta-Grasp domain Tmar_0457 PF03170 Bacterial cellulose synthase subunit Tmar_0457 PF03552 Cellulose synthase Tmar_0457 PF00535 Glycosyl transferase family 2 Tmar_0457 PF07238 PilZ domain Tmar_0458 PF00664 ABC transporter transmembrane region Tmar_0458 PF00005 ABC transporter Tmar_0459 PF08327 Activator of Hsp90 ATPase homolog 1-like protein Tmar_0462 PF00654 Voltage gated chloride channel Tmar_0463 PF01116 Fructose-bisphosphate aldolase class-II Tmar_0464 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Tmar_0466 PF01965 DJ-1/PfpI family Tmar_0468 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0469 PF03466 LysR substrate binding domain Tmar_0469 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Tmar_0470 PF01522 Polysaccharide deacetylase Tmar_0471 PF00005 ABC transporter Tmar_0475 PF17922 Tetracyclin repressor-like, C-terminal domain Tmar_0475 PF00440 Bacterial regulatory proteins, tetR family Tmar_0476 PF01012 Electron transfer flavoprotein domain Tmar_0477 PF01012 Electron transfer flavoprotein domain Tmar_0477 PF00766 Electron transfer flavoprotein FAD-binding domain Tmar_0478 PF02754 Cysteine-rich domain Tmar_0478 PF13183 4Fe-4S dicluster domain Tmar_0478 PF02665 Nitrate reductase gamma subunit Tmar_0479 PF13193 AMP-binding enzyme C-terminal domain Tmar_0479 PF00501 AMP-binding enzyme Tmar_0480 PF03061 Thioesterase superfamily Tmar_0482 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tmar_0482 PF13378 Enolase C-terminal domain-like Tmar_0485 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0486 PF00005 ABC transporter Tmar_0487 PF01545 Cation efflux family Tmar_0487 PF16916 Dimerisation domain of Zinc Transporter Tmar_0489 PF05958 tRNA (Uracil-5-)-methyltransferase Tmar_0489 PF01938 TRAM domain Tmar_0491 PF01425 Amidase Tmar_0493 PF00535 Glycosyl transferase family 2 Tmar_0495 PF01547 Bacterial extracellular solute-binding protein Tmar_0497 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0498 PF00005 ABC transporter Tmar_0498 PF08402 TOBE domain Tmar_0499 PF01370 NAD dependent epimerase/dehydratase family Tmar_0500 PF06470 SMC proteins Flexible Hinge Domain Tmar_0500 PF02463 RecF/RecN/SMC N terminal domain Tmar_0502 PF03030 Inorganic H+ pyrophosphatase Tmar_0503 PF03167 Uracil DNA glycosylase superfamily Tmar_0505 PF07690 Major Facilitator Superfamily Tmar_0507 PF00480 ROK family Tmar_0509 PF04545 Sigma-70, region 4 Tmar_0509 PF04542 Sigma-70 region 2 Tmar_0511 PF00005 ABC transporter Tmar_0513 PF00005 ABC transporter Tmar_0516 PF00266 Aminotransferase class-V Tmar_0517 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmar_0517 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmar_0517 PF01842 ACT domain Tmar_0519 PF13458 Periplasmic binding protein Tmar_0522 PF13732 Domain of unknown function (DUF4162) Tmar_0522 PF00005 ABC transporter Tmar_0523 PF00005 ABC transporter Tmar_0524 PF00378 Enoyl-CoA hydratase/isomerase Tmar_0525 PF02388 FemAB family Tmar_0526 PF00842 Alanine racemase, C-terminal domain Tmar_0526 PF01168 Alanine racemase, N-terminal domain Tmar_0527 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Tmar_0528 PF01910 Thiamine-binding protein Tmar_0529 PF07690 Major Facilitator Superfamily Tmar_0530 PF01476 LysM domain Tmar_0531 PF01680 SOR/SNZ family Tmar_0532 PF01174 SNO glutamine amidotransferase family Tmar_0533 PF02632 BioY family Tmar_0534 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tmar_0534 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tmar_0535 PF01960 ArgJ family Tmar_0536 PF00696 Amino acid kinase family Tmar_0537 PF00202 Aminotransferase class-III Tmar_0538 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmar_0538 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmar_0539 PF00764 Arginosuccinate synthase Tmar_0541 PF14698 Argininosuccinate lyase C-terminal Tmar_0541 PF00206 Lyase Tmar_0542 PF03576 Peptidase family S58 Tmar_0543 PF03167 Uracil DNA glycosylase superfamily Tmar_0544 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmar_0544 PF01799 [2Fe-2S] binding domain Tmar_0545 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tmar_0545 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_0546 PF03450 CO dehydrogenase flavoprotein C-terminal domain Tmar_0546 PF00941 FAD binding domain in molybdopterin dehydrogenase Tmar_0548 PF00982 Glycosyltransferase family 20 Tmar_0550 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0551 PF00005 ABC transporter Tmar_0551 PF00571 CBS domain Tmar_0553 PF02585 GlcNAc-PI de-N-acetylase Tmar_0555 PF01475 Ferric uptake regulator family Tmar_0556 PF00005 ABC transporter Tmar_0557 PF00950 ABC 3 transport family Tmar_0558 PF01297 Zinc-uptake complex component A periplasmic Tmar_0559 PF07690 Major Facilitator Superfamily Tmar_0561 PF00011 Hsp20/alpha crystallin family Tmar_0563 PF03069 Acetamidase/Formamidase family Tmar_0567 PF07676 WD40-like Beta Propeller Repeat Tmar_0567 PF00326 Prolyl oligopeptidase family Tmar_0568 PF01551 Peptidase family M23 Tmar_0568 PF01464 Transglycosylase SLT domain Tmar_0568 PF10145 Phage-related minor tail protein Tmar_0569 PF03180 NLPA lipoprotein Tmar_0570 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0571 PF00005 ABC transporter Tmar_0571 PF09383 NIL domain Tmar_0572 PF13537 Glutamine amidotransferase domain Tmar_0572 PF00733 Asparagine synthase Tmar_0573 PF13458 Periplasmic binding protein Tmar_0574 PF02653 Branched-chain amino acid transport system / permease component Tmar_0575 PF11862 Domain of unknown function (DUF3382) Tmar_0575 PF02653 Branched-chain amino acid transport system / permease component Tmar_0576 PF00005 ABC transporter Tmar_0576 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tmar_0577 PF00005 ABC transporter Tmar_0579 PF00892 EamA-like transporter family Tmar_0581 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Tmar_0582 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Tmar_0583 PF03611 PTS system sugar-specific permease component Tmar_0584 PF13580 SIS domain Tmar_0586 PF01979 Amidohydrolase family Tmar_0587 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Tmar_0589 PF01619 Proline dehydrogenase Tmar_0590 PF01502 Phosphoribosyl-AMP cyclohydrolase Tmar_0590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tmar_0591 PF00977 Histidine biosynthesis protein Tmar_0592 PF00977 Histidine biosynthesis protein Tmar_0593 PF00117 Glutamine amidotransferase class-I Tmar_0594 PF00475 Imidazoleglycerol-phosphate dehydratase Tmar_0595 PF00815 Histidinol dehydrogenase Tmar_0596 PF01634 ATP phosphoribosyltransferase Tmar_0597 PF13393 Histidyl-tRNA synthetase Tmar_0598 PF01266 FAD dependent oxidoreductase Tmar_0600 PF02423 Ornithine cyclodeaminase/mu-crystallin family Tmar_0602 PF01371 Trp repressor protein Tmar_0607 PF01476 LysM domain Tmar_0610 PF00072 Response regulator receiver domain Tmar_0610 PF00486 Transcriptional regulatory protein, C terminal Tmar_0611 PF00512 His Kinase A (phospho-acceptor) domain Tmar_0611 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_0611 PF00672 HAMP domain Tmar_0612 PF00156 Phosphoribosyl transferase domain Tmar_0616 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_0616 PF00107 Zinc-binding dehydrogenase Tmar_0617 PF00596 Class II Aldolase and Adducin N-terminal domain Tmar_0619 PF00795 Carbon-nitrogen hydrolase Tmar_0619 PF02540 NAD synthase Tmar_0620 PF00924 Mechanosensitive ion channel Tmar_0621 PF00905 Penicillin binding protein transpeptidase domain Tmar_0621 PF03717 Penicillin-binding Protein dimerisation domain Tmar_0621 PF05223 NTF2-like N-terminal transpeptidase domain Tmar_0622 PF00994 Probable molybdopterin binding domain Tmar_0622 PF03454 MoeA C-terminal region (domain IV) Tmar_0622 PF03453 MoeA N-terminal region (domain I and II) Tmar_0623 PF13411 MerR HTH family regulatory protein Tmar_0624 PF03951 Glutamine synthetase, beta-Grasp domain Tmar_0624 PF00120 Glutamine synthetase, catalytic domain Tmar_0625 PF03861 ANTAR domain Tmar_0625 PF00072 Response regulator receiver domain Tmar_0626 PF00909 Ammonium Transporter Family Tmar_0627 PF00733 Asparagine synthase Tmar_0627 PF13537 Glutamine amidotransferase domain Tmar_0628 PF04264 YceI-like domain Tmar_0629 PF01638 HxlR-like helix-turn-helix Tmar_0630 PF00135 Carboxylesterase family Tmar_0631 PF00310 Glutamine amidotransferases class-II Tmar_0631 PF01493 GXGXG motif Tmar_0631 PF04898 Glutamate synthase central domain Tmar_0631 PF01645 Conserved region in glutamate synthase Tmar_0636 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tmar_0636 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tmar_0636 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tmar_0637 PF13439 Glycosyltransferase Family 4 Tmar_0637 PF00534 Glycosyl transferases group 1 Tmar_0638 PF03808 Glycosyl transferase WecB/TagA/CpsF family Tmar_0641 PF08486 Stage II sporulation protein Tmar_0641 PF04122 Putative cell wall binding repeat 2 Tmar_0643 PF13439 Glycosyltransferase Family 4 Tmar_0643 PF00534 Glycosyl transferases group 1 Tmar_0647 PF03023 Lipid II flippase MurJ Tmar_0650 PF00005 ABC transporter Tmar_0651 PF00005 ABC transporter Tmar_0651 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tmar_0652 PF11862 Domain of unknown function (DUF3382) Tmar_0652 PF02653 Branched-chain amino acid transport system / permease component Tmar_0653 PF02653 Branched-chain amino acid transport system / permease component Tmar_0656 PF08818 Domain of unknown function (DU1801) Tmar_0657 PF02146 Sir2 family Tmar_0659 PF05163 DinB family Tmar_0662 PF00437 Type II/IV secretion system protein Tmar_0663 PF06750 Bacterial Peptidase A24 N-terminal domain Tmar_0663 PF01478 Type IV leader peptidase family Tmar_0664 PF00437 Type II/IV secretion system protein Tmar_0665 PF00482 Type II secretion system (T2SS), protein F Tmar_0666 PF00114 Pilin (bacterial filament) Tmar_0666 PF07963 Prokaryotic N-terminal methylation motif Tmar_0674 PF00483 Nucleotidyl transferase Tmar_0674 PF01050 Mannose-6-phosphate isomerase Tmar_0675 PF00483 Nucleotidyl transferase Tmar_0680 PF00291 Pyridoxal-phosphate dependent enzyme Tmar_0683 PF00561 alpha/beta hydrolase fold Tmar_0685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_0686 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0687 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_0687 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0688 PF00005 ABC transporter Tmar_0688 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_0689 PF00005 ABC transporter Tmar_0689 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_0690 PF03023 Lipid II flippase MurJ Tmar_0691 PF01618 MotA/TolQ/ExbB proton channel family Tmar_0692 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tmar_0692 PF00691 OmpA family Tmar_0693 PF01966 HD domain Tmar_0695 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain Tmar_0695 PF07228 Stage II sporulation protein E (SpoIIE) Tmar_0697 PF01740 STAS domain Tmar_0699 PF03023 Lipid II flippase MurJ Tmar_0700 PF00082 Subtilase family Tmar_0701 PF13439 Glycosyltransferase Family 4 Tmar_0701 PF00534 Glycosyl transferases group 1 Tmar_0702 PF17850 CysA C-terminal regulatory domain Tmar_0702 PF00005 ABC transporter Tmar_0703 PF03649 Uncharacterised protein family (UPF0014) Tmar_0704 PF02397 Bacterial sugar transferase Tmar_0705 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Tmar_0705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Tmar_0707 PF00480 ROK family Tmar_0707 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tmar_0709 PF08402 TOBE domain Tmar_0709 PF00005 ABC transporter Tmar_0710 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0712 PF00206 Lyase Tmar_0712 PF14698 Argininosuccinate lyase C-terminal Tmar_0717 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tmar_0717 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tmar_0717 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tmar_0718 PF16363 GDP-mannose 4,6 dehydratase Tmar_0721 PF00266 Aminotransferase class-V Tmar_0722 PF00005 ABC transporter Tmar_0723 PF00005 ABC transporter Tmar_0726 PF01380 SIS domain Tmar_0727 PF08220 DeoR-like helix-turn-helix domain Tmar_0727 PF00455 DeoR C terminal sensor domain Tmar_0728 PF01116 Fructose-bisphosphate aldolase class-II Tmar_0729 PF02417 Chromate transporter Tmar_0731 PF03851 UV-endonuclease UvdE Tmar_0732 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmar_0732 PF02770 Acyl-CoA dehydrogenase, middle domain Tmar_0732 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmar_0736 PF01654 Cytochrome bd terminal oxidase subunit I Tmar_0738 PF03816 Cell envelope-related transcriptional attenuator domain Tmar_0739 PF00990 Diguanylate cyclase, GGDEF domain Tmar_0743 PF01235 Sodium:alanine symporter family Tmar_0746 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_0747 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0748 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0748 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_0749 PF07722 Peptidase C26 Tmar_0751 PF01546 Peptidase family M20/M25/M40 Tmar_0751 PF07687 Peptidase dimerisation domain Tmar_0753 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tmar_0756 PF00296 Luciferase-like monooxygenase Tmar_0757 PF00464 Serine hydroxymethyltransferase Tmar_0759 PF02261 Aspartate decarboxylase Tmar_0761 PF02401 LytB protein Tmar_0762 PF00571 CBS domain Tmar_0762 PF00005 ABC transporter Tmar_0763 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_0764 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Tmar_0767 PF07995 Glucose / Sorbosone dehydrogenase Tmar_0769 PF01475 Ferric uptake regulator family Tmar_0771 PF00486 Transcriptional regulatory protein, C terminal Tmar_0771 PF00072 Response regulator receiver domain Tmar_0772 PF00672 HAMP domain Tmar_0772 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_0772 PF00512 His Kinase A (phospho-acceptor) domain Tmar_0773 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmar_0774 PF01645 Conserved region in glutamate synthase Tmar_0776 PF00730 HhH-GPD superfamily base excision DNA repair protein Tmar_0776 PF10576 Iron-sulfur binding domain of endonuclease III Tmar_0776 PF00633 Helix-hairpin-helix motif Tmar_0779 PF00459 Inositol monophosphatase family Tmar_0780 PF13344 Haloacid dehalogenase-like hydrolase Tmar_0780 PF00293 NUDIX domain Tmar_0781 PF02660 Glycerol-3-phosphate acyltransferase Tmar_0784 PF13361 UvrD-like helicase C-terminal domain Tmar_0784 PF12705 PD-(D/E)XK nuclease superfamily Tmar_0785 PF12705 PD-(D/E)XK nuclease superfamily Tmar_0785 PF13361 UvrD-like helicase C-terminal domain Tmar_0785 PF00580 UvrD/REP helicase N-terminal domain Tmar_0791 PF00269 Small, acid-soluble spore proteins, alpha/beta type Tmar_0792 PF00860 Permease family Tmar_0793 PF00132 Bacterial transferase hexapeptide (six repeats) Tmar_0797 PF00072 Response regulator receiver domain Tmar_0797 PF00196 Bacterial regulatory proteins, luxR family Tmar_0800 PF02811 PHP domain Tmar_0800 PF14579 Helix-hairpin-helix motif Tmar_0800 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmar_0800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmar_0802 PF00588 SpoU rRNA Methylase family Tmar_0804 PF00795 Carbon-nitrogen hydrolase Tmar_0807 PF00708 Acylphosphatase Tmar_0809 PF01925 Sulfite exporter TauE/SafE Tmar_0810 PF01925 Sulfite exporter TauE/SafE Tmar_0811 PF04284 Protein of unknown function (DUF441) Tmar_0813 PF01106 NifU-like domain Tmar_0816 PF10057 Uncharacterized conserved protein (DUF2294) Tmar_0817 PF00361 Proton-conducting membrane transporter Tmar_0817 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tmar_0818 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) Tmar_0819 PF01432 Peptidase family M3 Tmar_0819 PF08439 Oligopeptidase F Tmar_0820 PF13180 PDZ domain Tmar_0821 PF08741 YwhD family Tmar_0824 PF13520 Amino acid permease Tmar_0825 PF03129 Anticodon binding domain Tmar_0825 PF02824 TGS domain Tmar_0825 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmar_0825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmar_0826 PF00707 Translation initiation factor IF-3, C-terminal domain Tmar_0826 PF05198 Translation initiation factor IF-3, N-terminal domain Tmar_0827 PF01632 Ribosomal protein L35 Tmar_0829 PF02386 Cation transport protein Tmar_0830 PF02080 TrkA-C domain Tmar_0830 PF02254 TrkA-N domain Tmar_0831 PF00588 SpoU rRNA Methylase family Tmar_0831 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tmar_0836 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tmar_0836 PF01409 tRNA synthetases class II core domain (F) Tmar_0837 PF03483 B3/4 domain Tmar_0837 PF03484 tRNA synthetase B5 domain Tmar_0837 PF03147 Ferredoxin-fold anticodon binding domain Tmar_0837 PF01588 Putative tRNA binding domain Tmar_0837 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tmar_0838 PF05164 Cell division protein ZapA Tmar_0839 PF14716 Helix-hairpin-helix domain Tmar_0839 PF14791 DNA polymerase beta thumb Tmar_0839 PF02811 PHP domain Tmar_0840 PF00488 MutS domain V Tmar_0840 PF01713 Smr domain Tmar_0841 PF00905 Penicillin binding protein transpeptidase domain Tmar_0841 PF00912 Transglycosylase Tmar_0842 PF00579 tRNA synthetases class I (W and Y) Tmar_0842 PF01479 S4 domain Tmar_0844 PF00291 Pyridoxal-phosphate dependent enzyme Tmar_0845 PF01709 Transcriptional regulator Tmar_0847 PF02075 Crossover junction endodeoxyribonuclease RuvC Tmar_0848 PF01330 RuvA N terminal domain Tmar_0848 PF07499 RuvA, C-terminal domain Tmar_0849 PF17864 RuvB AAA lid domain Tmar_0849 PF05491 RuvB C-terminal winged helix domain Tmar_0849 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tmar_0850 PF11146 Protein of unknown function (DUF2905) Tmar_0851 PF04542 Sigma-70 region 2 Tmar_0853 PF02547 Queuosine biosynthesis protein Tmar_0854 PF01702 Queuine tRNA-ribosyltransferase Tmar_0855 PF02699 Preprotein translocase subunit Tmar_0856 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmar_0856 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_0857 PF01039 Carboxyl transferase domain Tmar_0859 PF00364 Biotin-requiring enzyme Tmar_0860 PF01812 5-formyltetrahydrofolate cyclo-ligase family Tmar_0861 PF02381 MraZ protein, putative antitoxin-like Tmar_0862 PF01795 MraW methylase family Tmar_0864 PF00905 Penicillin binding protein transpeptidase domain Tmar_0864 PF03717 Penicillin-binding Protein dimerisation domain Tmar_0864 PF03793 PASTA domain Tmar_0865 PF08245 Mur ligase middle domain Tmar_0865 PF02875 Mur ligase family, glutamate ligase domain Tmar_0865 PF01225 Mur ligase family, catalytic domain Tmar_0866 PF01225 Mur ligase family, catalytic domain Tmar_0866 PF08245 Mur ligase middle domain Tmar_0866 PF02875 Mur ligase family, glutamate ligase domain Tmar_0867 PF00953 Glycosyl transferase family 4 Tmar_0867 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tmar_0868 PF01098 Cell cycle protein Tmar_0869 PF04101 Glycosyltransferase family 28 C-terminal domain Tmar_0869 PF03033 Glycosyltransferase family 28 N-terminal domain Tmar_0870 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tmar_0870 PF01565 FAD binding domain Tmar_0872 PF12327 FtsZ family, C-terminal domain Tmar_0872 PF00091 Tubulin/FtsZ family, GTPase domain Tmar_0873 PF03419 Sporulation factor SpoIIGA Tmar_0874 PF04545 Sigma-70, region 4 Tmar_0874 PF04542 Sigma-70 region 2 Tmar_0875 PF04545 Sigma-70, region 4 Tmar_0875 PF04539 Sigma-70 region 3 Tmar_0875 PF04542 Sigma-70 region 2 Tmar_0876 PF09551 Stage II sporulation protein R (spore_II_R) Tmar_0877 PF05239 PRC-barrel domain Tmar_0879 PF01168 Alanine racemase, N-terminal domain Tmar_0880 PF04472 Cell division protein SepF Tmar_0881 PF02325 YGGT family Tmar_0882 PF05103 DivIVA protein Tmar_0885 PF06827 Zinc finger found in FPG and IleRS Tmar_0885 PF08264 Anticodon-binding domain of tRNA Tmar_0885 PF00133 tRNA synthetases class I (I, L, M and V) Tmar_0886 PF01177 Asp/Glu/Hydantoin racemase Tmar_0887 PF07969 Amidohydrolase family Tmar_0889 PF01950 Fructose-1,6-bisphosphatase Tmar_0891 PF01258 Prokaryotic dksA/traR C4-type zinc finger Tmar_0892 PF01252 Signal peptidase (SPase) II Tmar_0893 PF01479 S4 domain Tmar_0893 PF00849 RNA pseudouridylate synthase Tmar_0894 PF00156 Phosphoribosyl transferase domain Tmar_0895 PF02595 Glycerate kinase family Tmar_0897 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tmar_0897 PF00378 Enoyl-CoA hydratase/isomerase Tmar_0897 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tmar_0898 PF00108 Thiolase, N-terminal domain Tmar_0898 PF02803 Thiolase, C-terminal domain Tmar_0899 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmar_0899 PF02770 Acyl-CoA dehydrogenase, middle domain Tmar_0899 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmar_0901 PF13380 CoA binding domain Tmar_0901 PF00583 Acetyltransferase (GNAT) family Tmar_0901 PF13607 Succinyl-CoA ligase like flavodoxin domain Tmar_0905 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Tmar_0905 PF02558 Ketopantoate reductase PanE/ApbA Tmar_0908 PF00690 Cation transporter/ATPase, N-terminus Tmar_0908 PF00689 Cation transporting ATPase, C-terminus Tmar_0909 PF01678 Diaminopimelate epimerase Tmar_0910 PF00155 Aminotransferase class I and II Tmar_0912 PF03755 YicC-like family, N-terminal region Tmar_0912 PF08340 Domain of unknown function (DUF1732) Tmar_0913 PF04025 Domain of unknown function (DUF370) Tmar_0914 PF00625 Guanylate kinase Tmar_0915 PF01192 RNA polymerase Rpb6 Tmar_0916 PF04127 DNA / pantothenate metabolism flavoprotein Tmar_0916 PF02441 Flavoprotein Tmar_0917 PF04851 Type III restriction enzyme, res subunit Tmar_0917 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tmar_0917 PF18074 Primosomal protein N C-terminal domain Tmar_0917 PF17764 3′ DNA-binding domain (3′BD) Tmar_0917 PF00271 Helicase conserved C-terminal domain Tmar_0918 PF02911 Formyl transferase, C-terminal domain Tmar_0918 PF00551 Formyl transferase Tmar_0919 PF04298 Putative neutral zinc metallopeptidase Tmar_0920 PF01189 16S rRNA methyltransferase RsmB/F Tmar_0920 PF01029 NusB family Tmar_0921 PF04055 Radical SAM superfamily Tmar_0923 PF00069 Protein kinase domain Tmar_0923 PF03793 PASTA domain Tmar_0924 PF03193 RsgA GTPase Tmar_0924 PF16745 RsgA N-terminal domain Tmar_0925 PF00834 Ribulose-phosphate 3 epimerase family Tmar_0926 PF01430 Hsp33 protein Tmar_0927 PF00830 Ribosomal L28 family Tmar_0929 PF00270 DEAD/DEAH box helicase Tmar_0929 PF17191 RecG wedge domain Tmar_0929 PF00271 Helicase conserved C-terminal domain Tmar_0931 PF03418 Germination protease Tmar_0932 PF07690 Major Facilitator Superfamily Tmar_0934 PF01467 Cytidylyltransferase-like Tmar_0936 PF07670 Nucleoside recognition Tmar_0940 PF18019 HD domain Tmar_0944 PF01783 Ribosomal L32p protein family Tmar_0946 PF02504 Fatty acid synthesis protein Tmar_0947 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tmar_0947 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tmar_0948 PF00698 Acyl transferase domain Tmar_0950 PF00550 Phosphopantetheine attachment site Tmar_0951 PF00109 Beta-ketoacyl synthase, N-terminal domain Tmar_0951 PF02801 Beta-ketoacyl synthase, C-terminal domain Tmar_0952 PF00035 Double-stranded RNA binding motif Tmar_0952 PF14622 Ribonuclease-III-like Tmar_0953 PF04232 Stage V sporulation protein S (SpoVS) Tmar_0954 PF06470 SMC proteins Flexible Hinge Domain Tmar_0954 PF02463 RecF/RecN/SMC N terminal domain Tmar_0955 PF00448 SRP54-type protein, GTPase domain Tmar_0955 PF02881 SRP54-type protein, helical bundle domain Tmar_0956 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Tmar_0957 PF02978 Signal peptide binding domain Tmar_0957 PF02881 SRP54-type protein, helical bundle domain Tmar_0957 PF00448 SRP54-type protein, GTPase domain Tmar_0958 PF00886 Ribosomal protein S16 Tmar_0960 PF01782 RimM N-terminal domain Tmar_0960 PF05239 PRC-barrel domain Tmar_0961 PF01746 tRNA (Guanine-1)-methyltransferase Tmar_0962 PF01245 Ribosomal protein L19 Tmar_0963 PF10502 Signal peptidase, peptidase S26 Tmar_0964 PF01926 50S ribosome-binding GTPase Tmar_0965 PF01351 Ribonuclease HII Tmar_0966 PF02021 Uncharacterised protein family UPF0102 Tmar_0967 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tmar_0967 PF01078 Magnesium chelatase, subunit ChlI Tmar_0968 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_0969 PF02481 DNA recombination-mediator protein A Tmar_0969 PF17782 DprA winged helix domain Tmar_0970 PF01396 Topoisomerase DNA binding C4 zinc finger Tmar_0970 PF01751 Toprim domain Tmar_0970 PF01131 DNA topoisomerase Tmar_0971 PF01134 Glucose inhibited division protein A Tmar_0972 PF02899 Phage integrase, N-terminal SAM-like domain Tmar_0972 PF00589 Phage integrase family Tmar_0973 PF00227 Proteasome subunit Tmar_0974 PF10431 C-terminal, D2-small domain, of ClpB protein Tmar_0974 PF07724 AAA domain (Cdc48 subfamily) Tmar_0974 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_0975 PF00460 Flagella basal body rod protein Tmar_0976 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmar_0976 PF00460 Flagella basal body rod protein Tmar_0977 PF02049 Flagellar hook-basal body complex protein FliE Tmar_0978 PF08345 Flagellar M-ring protein C-terminal Tmar_0978 PF01514 Secretory protein of YscJ/FliF family Tmar_0979 PF01706 FliG C-terminal domain Tmar_0979 PF14841 FliG middle domain Tmar_0979 PF14842 FliG N-terminal domain Tmar_0981 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmar_0981 PF18269 T3SS EscN ATPase C-terminal domain Tmar_0981 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmar_0985 PF07559 Flagellar basal body protein FlaE Tmar_0985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmar_0985 PF00460 Flagella basal body rod protein Tmar_0986 PF06289 Flagellar and Swarming motility proteins Tmar_0988 PF02154 Flagellar motor switch protein FliM Tmar_0988 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tmar_0989 PF04509 CheC-like family Tmar_0989 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tmar_0990 PF00072 Response regulator receiver domain Tmar_0992 PF00813 FliP family Tmar_0993 PF01313 Bacterial export proteins, family 3 Tmar_0994 PF01311 Bacterial export proteins, family 1 Tmar_0995 PF01312 FlhB HrpN YscU SpaS Family Tmar_0996 PF00771 FHIPEP family Tmar_0997 PF02881 SRP54-type protein, helical bundle domain Tmar_0997 PF00448 SRP54-type protein, GTPase domain Tmar_0997 PF02978 Signal peptide binding domain Tmar_0998 PF10609 NUBPL iron-transfer P-loop NTPase Tmar_1000 PF04545 Sigma-70, region 4 Tmar_1000 PF04539 Sigma-70 region 3 Tmar_1000 PF04542 Sigma-70 region 2 Tmar_1003 PF00318 Ribosomal protein S2 Tmar_1004 PF00889 Elongation factor TS Tmar_1005 PF00696 Amino acid kinase family Tmar_1006 PF01765 Ribosome recycling factor Tmar_1008 PF01255 Putative undecaprenyl diphosphate synthase Tmar_1010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tmar_1010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tmar_1010 PF13288 DXP reductoisomerase C-terminal domain Tmar_1011 PF17820 PDZ domain Tmar_1011 PF02163 Peptidase family M50 Tmar_1012 PF04551 GcpE protein Tmar_1013 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmar_1013 PF03129 Anticodon binding domain Tmar_1013 PF04073 Aminoacyl-tRNA editing domain Tmar_1015 PF02576 RimP N-terminal domain Tmar_1015 PF17384 RimP C-terminal SH3 domain Tmar_1016 PF13184 NusA-like KH domain Tmar_1016 PF08529 NusA N-terminal domain Tmar_1016 PF00575 S1 RNA binding domain Tmar_1017 PF04296 Protein of unknown function (DUF448) Tmar_1019 PF00009 Elongation factor Tu GTP binding domain Tmar_1019 PF11987 Translation-initiation factor 2 Tmar_1019 PF04760 Translation initiation factor IF-2, N-terminal region Tmar_1021 PF02033 Ribosome-binding factor A Tmar_1022 PF02272 DHHA1 domain Tmar_1022 PF01368 DHH family Tmar_1023 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tmar_1023 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tmar_1024 PF06574 FAD synthetase Tmar_1024 PF01687 Riboflavin kinase Tmar_1025 PF00312 Ribosomal protein S15 Tmar_1026 PF00575 S1 RNA binding domain Tmar_1026 PF00013 KH domain Tmar_1026 PF03725 3' exoribonuclease family, domain 2 Tmar_1026 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tmar_1026 PF01138 3' exoribonuclease family, domain 1 Tmar_1027 PF00675 Insulinase (Peptidase family M16) Tmar_1027 PF05193 Peptidase M16 inactive domain Tmar_1028 PF00692 dUTPase Tmar_1031 PF05173 Dihydrodipicolinate reductase, C-terminus Tmar_1031 PF01113 Dihydrodipicolinate reductase, N-terminus Tmar_1033 PF02441 Flavoprotein Tmar_1034 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tmar_1034 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tmar_1035 PF13840 ACT domain Tmar_1035 PF00696 Amino acid kinase family Tmar_1036 PF00701 Dihydrodipicolinate synthetase family Tmar_1037 PF17770 Ribonuclease J C-terminal domain Tmar_1037 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Tmar_1037 PF00753 Metallo-beta-lactamase superfamily Tmar_1038 PF00574 Clp protease Tmar_1040 PF02673 Bacitracin resistance protein BacA Tmar_1041 PF09397 Ftsk gamma domain Tmar_1041 PF01580 FtsK/SpoIIIE family Tmar_1041 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Tmar_1041 PF17854 FtsK alpha domain Tmar_1042 PF00704 Glycosyl hydrolases family 18 Tmar_1044 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmar_1044 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmar_1044 PF01842 ACT domain Tmar_1045 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) Tmar_1048 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmar_1048 PF02770 Acyl-CoA dehydrogenase, middle domain Tmar_1048 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmar_1049 PF00682 HMGL-like Tmar_1050 PF07943 Penicillin-binding protein 5, C-terminal domain Tmar_1050 PF00768 D-alanyl-D-alanine carboxypeptidase Tmar_1051 PF01336 OB-fold nucleic acid binding domain Tmar_1051 PF00152 tRNA synthetases class II (D, K and N) Tmar_1052 PF13464 Domain of unknown function (DUF4115) Tmar_1053 PF07943 Penicillin-binding protein 5, C-terminal domain Tmar_1053 PF00768 D-alanyl-D-alanine carboxypeptidase Tmar_1054 PF01522 Polysaccharide deacetylase Tmar_1056 PF09369 Domain of unknown function (DUF1998) Tmar_1056 PF00271 Helicase conserved C-terminal domain Tmar_1056 PF00270 DEAD/DEAH box helicase Tmar_1057 PF10079 Bacillithiol biosynthesis BshC Tmar_1058 PF09186 Domain of unknown function (DUF1949) Tmar_1058 PF01205 Uncharacterized protein family UPF0029 Tmar_1060 PF17862 AAA+ lid domain Tmar_1060 PF06480 FtsH Extracellular Tmar_1060 PF01434 Peptidase family M41 Tmar_1060 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_1061 PF18146 Damage-inducible protein CinA KH domain Tmar_1061 PF02464 Competence-damaged protein Tmar_1061 PF00994 Probable molybdopterin binding domain Tmar_1064 PF00154 recA bacterial DNA recombination protein Tmar_1065 PF02631 RecX family Tmar_1067 PF13277 YmdB-like protein Tmar_1068 PF01244 Membrane dipeptidase (Peptidase family M19) Tmar_1069 PF02789 Cytosol aminopeptidase family, N-terminal domain Tmar_1069 PF00883 Cytosol aminopeptidase family, catalytic domain Tmar_1070 PF02811 PHP domain Tmar_1073 PF04055 Radical SAM superfamily Tmar_1073 PF01938 TRAM domain Tmar_1073 PF00919 Uncharacterized protein family UPF0004 Tmar_1074 PF01624 MutS domain I Tmar_1074 PF05190 MutS family domain IV Tmar_1074 PF00488 MutS domain V Tmar_1074 PF05188 MutS domain II Tmar_1074 PF05192 MutS domain III Tmar_1075 PF08676 MutL C terminal dimerisation domain Tmar_1075 PF01119 DNA mismatch repair protein, C-terminal domain Tmar_1079 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tmar_1079 PF01926 50S ribosome-binding GTPase Tmar_1080 PF17866 AAA lid domain Tmar_1080 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_1081 PF13167 GTP-binding GTPase N-terminal Tmar_1081 PF16360 GTP-binding GTPase Middle Region Tmar_1081 PF01926 50S ribosome-binding GTPase Tmar_1083 PF00717 Peptidase S24-like Tmar_1083 PF01726 LexA DNA binding domain Tmar_1085 PF00378 Enoyl-CoA hydratase/isomerase Tmar_1086 PF00107 Zinc-binding dehydrogenase Tmar_1086 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_1089 PF00171 Aldehyde dehydrogenase family Tmar_1090 PF01522 Polysaccharide deacetylase Tmar_1090 PF11738 Protein of unknown function (DUF3298) Tmar_1090 PF13739 Deacetylase PdaC Tmar_1092 PF01975 Survival protein SurE Tmar_1093 PF13307 Helicase C-terminal domain Tmar_1093 PF04851 Type III restriction enzyme, res subunit Tmar_1093 PF00929 Exonuclease Tmar_1094 PF00300 Histidine phosphatase superfamily (branch 1) Tmar_1095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmar_1095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmar_1096 PF01979 Amidohydrolase family Tmar_1097 PF05221 S-adenosyl-L-homocysteine hydrolase Tmar_1097 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tmar_1098 PF01048 Phosphorylase superfamily Tmar_1099 PF00334 Nucleoside diphosphate kinase Tmar_1100 PF02675 S-adenosylmethionine decarboxylase Tmar_1103 PF00899 ThiF family Tmar_1106 PF09547 Stage IV sporulation protein A (spore_IV_A) Tmar_1108 PF02660 Glycerol-3-phosphate acyltransferase Tmar_1109 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tmar_1109 PF01926 50S ribosome-binding GTPase Tmar_1111 PF00575 S1 RNA binding domain Tmar_1112 PF01553 Acyltransferase Tmar_1113 PF02224 Cytidylate kinase Tmar_1119 PF01012 Electron transfer flavoprotein domain Tmar_1119 PF00766 Electron transfer flavoprotein FAD-binding domain Tmar_1120 PF01012 Electron transfer flavoprotein domain Tmar_1122 PF00849 RNA pseudouridylate synthase Tmar_1122 PF01479 S4 domain Tmar_1124 PF07670 Nucleoside recognition Tmar_1125 PF07670 Nucleoside recognition Tmar_1126 PF00271 Helicase conserved C-terminal domain Tmar_1126 PF00176 SNF2 family N-terminal domain Tmar_1128 PF01068 ATP dependent DNA ligase domain Tmar_1128 PF04679 ATP dependent DNA ligase C terminal region Tmar_1129 PF02735 Ku70/Ku80 beta-barrel domain Tmar_1130 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Tmar_1132 PF04079 Segregation and condensation complex subunit ScpB Tmar_1133 PF02616 Segregation and condensation protein ScpA Tmar_1134 PF02163 Peptidase family M50 Tmar_1135 PF03323 Bacillus/Clostridium GerA spore germination protein Tmar_1136 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Tmar_1137 PF07451 Stage V sporulation protein AD (SpoVAD) Tmar_1138 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Tmar_1140 PF04545 Sigma-70, region 4 Tmar_1140 PF04539 Sigma-70 region 3 Tmar_1140 PF04542 Sigma-70 region 2 Tmar_1141 PF13581 Histidine kinase-like ATPase domain Tmar_1142 PF01740 STAS domain Tmar_1143 PF00768 D-alanyl-D-alanine carboxypeptidase Tmar_1143 PF07943 Penicillin-binding protein 5, C-terminal domain Tmar_1144 PF03841 L-seryl-tRNA selenium transferase Tmar_1144 PF12390 Selenocysteine synthase N terminal Tmar_1145 PF00589 Phage integrase family Tmar_1145 PF02899 Phage integrase, N-terminal SAM-like domain Tmar_1146 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Tmar_1146 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Tmar_1148 PF00293 NUDIX domain Tmar_1151 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmar_1151 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_1152 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmar_1152 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_1157 PF00072 Response regulator receiver domain Tmar_1157 PF08769 Sporulation initiation factor Spo0A C terminal Tmar_1158 PF05580 SpoIVB peptidase S55 Tmar_1158 PF17820 PDZ domain Tmar_1159 PF02463 RecF/RecN/SMC N terminal domain Tmar_1160 PF01316 Arginine repressor, DNA binding domain Tmar_1160 PF02863 Arginine repressor, C-terminal domain Tmar_1161 PF01513 ATP-NAD kinase Tmar_1163 PF00180 Isocitrate/isopropylmalate dehydrogenase Tmar_1163 PF18324 Hypothetical protein TT1725 Tmar_1164 PF07687 Peptidase dimerisation domain Tmar_1164 PF01546 Peptidase family M20/M25/M40 Tmar_1165 PF00701 Dihydrodipicolinate synthetase family Tmar_1166 PF01728 FtsJ-like methyltransferase Tmar_1166 PF01479 S4 domain Tmar_1167 PF02779 Transketolase, pyrimidine binding domain Tmar_1167 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tmar_1167 PF02780 Transketolase, C-terminal domain Tmar_1169 PF00348 Polyprenyl synthetase Tmar_1170 PF02609 Exonuclease VII small subunit Tmar_1171 PF13742 OB-fold nucleic acid binding domain Tmar_1171 PF02601 Exonuclease VII, large subunit Tmar_1172 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tmar_1172 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tmar_1173 PF01029 NusB family Tmar_1176 PF03780 Asp23 family, cell envelope-related function Tmar_1177 PF12685 SpoIIIAH-like protein Tmar_1180 PF09546 Stage III sporulation protein AE (spore_III_AE) Tmar_1181 PF06686 Stage III sporulation protein AC/AD protein family Tmar_1182 PF06686 Stage III sporulation protein AC/AD protein family Tmar_1187 PF00557 Metallopeptidase family M24 Tmar_1187 PF01321 Creatinase/Prolidase N-terminal domain Tmar_1188 PF00156 Phosphoribosyl transferase domain Tmar_1189 PF02347 Glycine cleavage system P-protein Tmar_1190 PF02347 Glycine cleavage system P-protein Tmar_1191 PF01597 Glycine cleavage H-protein Tmar_1192 PF01571 Aminomethyltransferase folate-binding domain Tmar_1192 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tmar_1193 PF00293 NUDIX domain Tmar_1193 PF13344 Haloacid dehalogenase-like hydrolase Tmar_1195 PF13439 Glycosyltransferase Family 4 Tmar_1195 PF00534 Glycosyl transferases group 1 Tmar_1202 PF00437 Type II/IV secretion system protein Tmar_1205 PF00395 S-layer homology domain Tmar_1208 PF00437 Type II/IV secretion system protein Tmar_1209 PF00072 Response regulator receiver domain Tmar_1209 PF01339 CheB methylesterase Tmar_1214 PF00072 Response regulator receiver domain Tmar_1214 PF00196 Bacterial regulatory proteins, luxR family Tmar_1215 PF05384 Sensor protein DegS Tmar_1215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1215 PF07730 Histidine kinase Tmar_1217 PF04542 Sigma-70 region 2 Tmar_1217 PF04545 Sigma-70, region 4 Tmar_1218 PF02618 YceG-like family Tmar_1219 PF03652 Holliday junction resolvase Tmar_1222 PF06135 IreB regulatory phosphoprotein Tmar_1223 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmar_1223 PF02272 DHHA1 domain Tmar_1223 PF01411 tRNA synthetases class II (A) Tmar_1225 PF01594 AI-2E family transporter Tmar_1229 PF00266 Aminotransferase class-V Tmar_1232 PF02082 Transcriptional regulator Tmar_1233 PF02885 Glycosyl transferase family, helical bundle domain Tmar_1233 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tmar_1233 PF00591 Glycosyl transferase family, a/b domain Tmar_1234 PF01791 DeoC/LacD family aldolase Tmar_1235 PF00265 Thymidine kinase Tmar_1236 PF12002 MgsA AAA+ ATPase C terminal Tmar_1236 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_1236 PF16193 AAA C-terminal domain Tmar_1237 PF01212 Beta-eliminating lyase Tmar_1239 PF00085 Thioredoxin Tmar_1240 PF01336 OB-fold nucleic acid binding domain Tmar_1240 PF00152 tRNA synthetases class II (D, K and N) Tmar_1240 PF02938 GAD domain Tmar_1241 PF13393 Histidyl-tRNA synthetase Tmar_1241 PF03129 Anticodon binding domain Tmar_1242 PF02580 D-Tyr-tRNA(Tyr) deacylase Tmar_1243 PF13291 ACT domain Tmar_1243 PF02824 TGS domain Tmar_1243 PF04607 Region found in RelA / SpoT proteins Tmar_1244 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Tmar_1244 PF01368 DHH family Tmar_1244 PF02272 DHHA1 domain Tmar_1244 PF17768 RecJ OB domain Tmar_1246 PF13519 von Willebrand factor type A domain Tmar_1246 PF01078 Magnesium chelatase, subunit ChlI Tmar_1246 PF17863 AAA lid domain Tmar_1247 PF07549 SecD/SecF GG Motif Tmar_1247 PF02355 Protein export membrane protein Tmar_1248 PF07549 SecD/SecF GG Motif Tmar_1248 PF02355 Protein export membrane protein Tmar_1251 PF09106 Elongation factor SelB, winged helix Tmar_1251 PF09107 Elongation factor SelB, winged helix Tmar_1251 PF09105 Elongation factor SelB, winged helix Tmar_1251 PF03144 Elongation factor Tu domain 2 Tmar_1251 PF00009 Elongation factor Tu GTP binding domain Tmar_1252 PF00293 NUDIX domain Tmar_1255 PF02770 Acyl-CoA dehydrogenase, middle domain Tmar_1255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmar_1255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmar_1257 PF01642 Methylmalonyl-CoA mutase Tmar_1257 PF02310 B12 binding domain Tmar_1258 PF01642 Methylmalonyl-CoA mutase Tmar_1258 PF02310 B12 binding domain Tmar_1259 PF00490 Delta-aminolevulinic acid dehydratase Tmar_1260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmar_1261 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Tmar_1261 PF03900 Porphobilinogen deaminase, C-terminal domain Tmar_1263 PF01488 Shikimate / quinate 5-dehydrogenase Tmar_1263 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tmar_1263 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tmar_1264 PF01209 ubiE/COQ5 methyltransferase family Tmar_1265 PF02629 CoA binding domain Tmar_1265 PF00549 CoA-ligase Tmar_1266 PF08442 ATP-grasp domain Tmar_1266 PF00549 CoA-ligase Tmar_1267 PF03949 Malic enzyme, NAD binding domain Tmar_1267 PF00390 Malic enzyme, N-terminal domain Tmar_1268 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Tmar_1268 PF00056 lactate/malate dehydrogenase, NAD binding domain Tmar_1270 PF01578 Cytochrome C assembly protein Tmar_1271 PF00005 ABC transporter Tmar_1273 PF03100 CcmE Tmar_1275 PF15714 Stage V sporulation protein T C-terminal, transcription factor Tmar_1275 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Tmar_1276 PF06135 IreB regulatory phosphoprotein Tmar_1278 PF00266 Aminotransferase class-V Tmar_1279 PF02926 THUMP domain Tmar_1279 PF02568 Thiamine biosynthesis protein (ThiI) Tmar_1281 PF08331 Domain of unknown function (DUF1730) Tmar_1283 PF00768 D-alanyl-D-alanine carboxypeptidase Tmar_1283 PF07943 Penicillin-binding protein 5, C-terminal domain Tmar_1285 PF03447 Homoserine dehydrogenase, NAD binding domain Tmar_1285 PF01842 ACT domain Tmar_1285 PF00742 Homoserine dehydrogenase Tmar_1286 PF00561 alpha/beta hydrolase fold Tmar_1289 PF02237 Biotin protein ligase C terminal domain Tmar_1289 PF03099 Biotin/lipoate A/B protein ligase family Tmar_1289 PF08279 HTH domain Tmar_1290 PF17746 SfsA N-terminal OB domain Tmar_1290 PF03749 Sugar fermentation stimulation protein RE domain Tmar_1292 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmar_1292 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_1293 PF00501 AMP-binding enzyme Tmar_1293 PF13193 AMP-binding enzyme C-terminal domain Tmar_1294 PF01734 Patatin-like phospholipase Tmar_1295 PF03323 Bacillus/Clostridium GerA spore germination protein Tmar_1297 PF05504 Spore germination B3/ GerAC like, C-terminal Tmar_1299 PF00285 Citrate synthase, C-terminal domain Tmar_1300 PF00005 ABC transporter Tmar_1301 PF01032 FecCD transport family Tmar_1302 PF01497 Periplasmic binding protein Tmar_1303 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tmar_1307 PF00005 ABC transporter Tmar_1310 PF00873 AcrB/AcrD/AcrF family Tmar_1312 PF00440 Bacterial regulatory proteins, tetR family Tmar_1313 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tmar_1314 PF02245 Methylpurine-DNA glycosylase (MPG) Tmar_1315 PF02608 ABC transporter substrate-binding protein PnrA-like Tmar_1319 PF00664 ABC transporter transmembrane region Tmar_1319 PF00005 ABC transporter Tmar_1320 PF00664 ABC transporter transmembrane region Tmar_1320 PF00005 ABC transporter Tmar_1323 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tmar_1323 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tmar_1324 PF00149 Calcineurin-like phosphoesterase Tmar_1326 PF00005 ABC transporter Tmar_1327 PF09819 ABC-type cobalt transport system, permease component Tmar_1329 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmar_1329 PF02770 Acyl-CoA dehydrogenase, middle domain Tmar_1329 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmar_1332 PF02626 Carboxyltransferase domain, subdomain A and B Tmar_1333 PF02682 Carboxyltransferase domain, subdomain C and D Tmar_1334 PF03746 LamB/YcsF family Tmar_1336 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_1336 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1337 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1338 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_1339 PF00005 ABC transporter Tmar_1339 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1340 PF00005 ABC transporter Tmar_1340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1342 PF00205 Thiamine pyrophosphate enzyme, central domain Tmar_1342 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1342 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tmar_1343 PF00501 AMP-binding enzyme Tmar_1343 PF13193 AMP-binding enzyme C-terminal domain Tmar_1346 PF01520 N-acetylmuramoyl-L-alanine amidase Tmar_1350 PF01979 Amidohydrolase family Tmar_1350 PF13382 Adenine deaminase C-terminal domain Tmar_1351 PF08546 Ketopantoate reductase PanE/ApbA C terminal Tmar_1351 PF02558 Ketopantoate reductase PanE/ApbA Tmar_1352 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tmar_1353 PF04143 Sulphur transport Tmar_1355 PF00512 His Kinase A (phospho-acceptor) domain Tmar_1355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1355 PF00672 HAMP domain Tmar_1355 PF00989 PAS fold Tmar_1355 PF18698 Histidine kinase sensor domain Tmar_1356 PF00072 Response regulator receiver domain Tmar_1356 PF00486 Transcriptional regulatory protein, C terminal Tmar_1357 PF00174 Oxidoreductase molybdopterin binding domain Tmar_1359 PF03109 ABC1 family Tmar_1361 PF01546 Peptidase family M20/M25/M40 Tmar_1361 PF07687 Peptidase dimerisation domain Tmar_1362 PF02585 GlcNAc-PI de-N-acetylase Tmar_1363 PF00534 Glycosyl transferases group 1 Tmar_1363 PF13439 Glycosyltransferase Family 4 Tmar_1364 PF00575 S1 RNA binding domain Tmar_1366 PF02142 MGS-like domain Tmar_1367 PF00269 Small, acid-soluble spore proteins, alpha/beta type Tmar_1368 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmar_1368 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmar_1368 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmar_1369 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1371 PF01931 Protein of unknown function DUF84 Tmar_1372 PF00196 Bacterial regulatory proteins, luxR family Tmar_1372 PF00072 Response regulator receiver domain Tmar_1373 PF07730 Histidine kinase Tmar_1373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1375 PF03591 AzlC protein Tmar_1380 PF02585 GlcNAc-PI de-N-acetylase Tmar_1381 PF00902 Sec-independent protein translocase protein (TatC) Tmar_1382 PF02416 mttA/Hcf106 family Tmar_1384 PF05193 Peptidase M16 inactive domain Tmar_1385 PF05193 Peptidase M16 inactive domain Tmar_1385 PF00675 Insulinase (Peptidase family M16) Tmar_1387 PF00356 Bacterial regulatory proteins, lacI family Tmar_1389 PF00072 Response regulator receiver domain Tmar_1390 PF01039 Carboxyl transferase domain Tmar_1391 PF00364 Biotin-requiring enzyme Tmar_1392 PF00163 Ribosomal protein S4/S9 N-terminal domain Tmar_1392 PF01479 S4 domain Tmar_1393 PF01053 Cys/Met metabolism PLP-dependent enzyme Tmar_1394 PF01227 GTP cyclohydrolase I Tmar_1398 PF01274 Malate synthase Tmar_1400 PF01565 FAD binding domain Tmar_1400 PF02913 FAD linked oxidases, C-terminal domain Tmar_1401 PF13183 4Fe-4S dicluster domain Tmar_1401 PF02754 Cysteine-rich domain Tmar_1402 PF01565 FAD binding domain Tmar_1402 PF02913 FAD linked oxidases, C-terminal domain Tmar_1403 PF02913 FAD linked oxidases, C-terminal domain Tmar_1403 PF01565 FAD binding domain Tmar_1404 PF03009 Glycerophosphoryl diester phosphodiesterase family Tmar_1405 PF03450 CO dehydrogenase flavoprotein C-terminal domain Tmar_1405 PF00941 FAD binding domain in molybdopterin dehydrogenase Tmar_1406 PF01799 [2Fe-2S] binding domain Tmar_1406 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_1406 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tmar_1407 PF01799 [2Fe-2S] binding domain Tmar_1407 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmar_1408 PF00378 Enoyl-CoA hydratase/isomerase Tmar_1411 PF01497 Periplasmic binding protein Tmar_1413 PF06463 Molybdenum Cofactor Synthesis C Tmar_1413 PF04055 Radical SAM superfamily Tmar_1415 PF08359 YsiA-like protein, C-terminal region Tmar_1415 PF00440 Bacterial regulatory proteins, tetR family Tmar_1416 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tmar_1416 PF00925 GTP cyclohydrolase II Tmar_1417 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tmar_1417 PF02844 Phosphoribosylglycinamide synthetase, N domain Tmar_1417 PF02843 Phosphoribosylglycinamide synthetase, C domain Tmar_1418 PF01808 AICARFT/IMPCHase bienzyme Tmar_1418 PF02142 MGS-like domain Tmar_1419 PF00551 Formyl transferase Tmar_1420 PF00586 AIR synthase related protein, N-terminal domain Tmar_1420 PF02769 AIR synthase related protein, C-terminal domain Tmar_1421 PF00156 Phosphoribosyl transferase domain Tmar_1422 PF02769 AIR synthase related protein, C-terminal domain Tmar_1422 PF00586 AIR synthase related protein, N-terminal domain Tmar_1422 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tmar_1424 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tmar_1425 PF01259 SAICAR synthetase Tmar_1426 PF10397 Adenylosuccinate lyase C-terminus Tmar_1426 PF00206 Lyase Tmar_1427 PF00731 AIR carboxylase Tmar_1428 PF03992 Antibiotic biosynthesis monooxygenase Tmar_1430 PF00682 HMGL-like Tmar_1430 PF08502 LeuA allosteric (dimerisation) domain Tmar_1431 PF01521 Iron-sulphur cluster biosynthesis Tmar_1432 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1433 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmar_1433 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmar_1433 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmar_1434 PF14759 Reductase C-terminal Tmar_1434 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmar_1435 PF00005 ABC transporter Tmar_1436 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1437 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1438 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tmar_1439 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tmar_1439 PF03807 NADP oxidoreductase coenzyme F420-dependent Tmar_1440 PF01329 Pterin 4 alpha carbinolamine dehydratase Tmar_1442 PF17785 PUA-like domain Tmar_1442 PF10672 S-adenosylmethionine-dependent methyltransferase Tmar_1443 PF01370 NAD dependent epimerase/dehydratase family Tmar_1443 PF08338 Domain of unknown function (DUF1731) Tmar_1444 PF07690 Major Facilitator Superfamily Tmar_1450 PF00290 Tryptophan synthase alpha chain Tmar_1451 PF00291 Pyridoxal-phosphate dependent enzyme Tmar_1452 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tmar_1453 PF00218 Indole-3-glycerol phosphate synthase Tmar_1454 PF00591 Glycosyl transferase family, a/b domain Tmar_1454 PF02885 Glycosyl transferase family, helical bundle domain Tmar_1455 PF00117 Glutamine amidotransferase class-I Tmar_1457 PF13180 PDZ domain Tmar_1458 PF01568 Molydopterin dinucleotide binding domain Tmar_1458 PF00384 Molybdopterin oxidoreductase Tmar_1458 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Tmar_1459 PF02634 FdhD/NarQ family Tmar_1460 PF12804 MobA-like NTP transferase domain Tmar_1461 PF16197 Ketoacyl-synthetase C-terminal extension Tmar_1461 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_1461 PF00109 Beta-ketoacyl synthase, N-terminal domain Tmar_1461 PF00698 Acyl transferase domain Tmar_1461 PF14765 Polyketide synthase dehydratase Tmar_1461 PF00550 Phosphopantetheine attachment site Tmar_1461 PF02801 Beta-ketoacyl synthase, C-terminal domain Tmar_1461 PF08659 KR domain Tmar_1462 PF09339 IclR helix-turn-helix domain Tmar_1462 PF01614 Bacterial transcriptional regulator Tmar_1463 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_1464 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1465 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_1465 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1466 PF02417 Chromate transporter Tmar_1468 PF00005 ABC transporter Tmar_1468 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1469 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1469 PF00005 ABC transporter Tmar_1470 PF00696 Amino acid kinase family Tmar_1473 PF00860 Permease family Tmar_1474 PF02629 CoA binding domain Tmar_1474 PF00549 CoA-ligase Tmar_1475 PF06545 Protein of unknown function (DUF1116) Tmar_1476 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Tmar_1477 PF07969 Amidohydrolase family Tmar_1478 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tmar_1478 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_1479 PF01799 [2Fe-2S] binding domain Tmar_1479 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmar_1480 PF03450 CO dehydrogenase flavoprotein C-terminal domain Tmar_1480 PF00941 FAD binding domain in molybdopterin dehydrogenase Tmar_1481 PF07905 Purine catabolism regulatory protein-like family Tmar_1481 PF17853 GGDEF-like domain Tmar_1481 PF13556 PucR C-terminal helix-turn-helix domain Tmar_1482 PF00378 Enoyl-CoA hydratase/isomerase Tmar_1483 PF00501 AMP-binding enzyme Tmar_1483 PF13193 AMP-binding enzyme C-terminal domain Tmar_1483 PF16177 Acetyl-coenzyme A synthetase N-terminus Tmar_1485 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmar_1485 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmar_1485 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmar_1486 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tmar_1490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_1491 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmar_1491 PF01799 [2Fe-2S] binding domain Tmar_1492 PF03450 CO dehydrogenase flavoprotein C-terminal domain Tmar_1492 PF00941 FAD binding domain in molybdopterin dehydrogenase Tmar_1493 PF08000 Bacterial PH domain Tmar_1495 PF01883 Iron-sulfur cluster assembly protein Tmar_1496 PF00005 ABC transporter Tmar_1496 PF02687 FtsX-like permease family Tmar_1496 PF12704 MacB-like periplasmic core domain Tmar_1501 PF00535 Glycosyl transferase family 2 Tmar_1503 PF10609 NUBPL iron-transfer P-loop NTPase Tmar_1504 PF07731 Multicopper oxidase Tmar_1504 PF07732 Multicopper oxidase Tmar_1505 PF13186 Iron-sulfur cluster-binding domain Tmar_1505 PF04055 Radical SAM superfamily Tmar_1506 PF07732 Multicopper oxidase Tmar_1509 PF00037 4Fe-4S binding domain Tmar_1510 PF00027 Cyclic nucleotide-binding domain Tmar_1510 PF13545 Crp-like helix-turn-helix domain Tmar_1512 PF10086 YhfC intramembrane metalloprotease Tmar_1513 PF00171 Aldehyde dehydrogenase family Tmar_1514 PF00268 Ribonucleotide reductase, small chain Tmar_1515 PF00107 Zinc-binding dehydrogenase Tmar_1515 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_1515 PF13823 Alcohol dehydrogenase GroES-associated Tmar_1517 PF00440 Bacterial regulatory proteins, tetR family Tmar_1518 PF12804 MobA-like NTP transferase domain Tmar_1523 PF03109 ABC1 family Tmar_1525 PF04227 Indigoidine synthase A like protein Tmar_1526 PF02625 XdhC and CoxI family Tmar_1526 PF13478 XdhC Rossmann domain Tmar_1527 PF17871 AAA lid domain Tmar_1527 PF02861 Clp amino terminal domain, pathogenicity island component Tmar_1527 PF07724 AAA domain (Cdc48 subfamily) Tmar_1527 PF10431 C-terminal, D2-small domain, of ClpB protein Tmar_1527 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_1528 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tmar_1528 PF00480 ROK family Tmar_1529 PF01547 Bacterial extracellular solute-binding protein Tmar_1530 PF01548 Transposase Tmar_1530 PF02371 Transposase IS116/IS110/IS902 family Tmar_1531 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1532 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1534 PF02449 Beta-galactosidase Tmar_1534 PF08533 Beta-galactosidase C-terminal domain Tmar_1534 PF08532 Beta-galactosidase trimerisation domain Tmar_1543 PF13732 Domain of unknown function (DUF4162) Tmar_1543 PF00005 ABC transporter Tmar_1545 PF00440 Bacterial regulatory proteins, tetR family Tmar_1546 PF02538 Hydantoinase B/oxoprolinase Tmar_1547 PF05378 Hydantoinase/oxoprolinase N-terminal region Tmar_1547 PF01968 Hydantoinase/oxoprolinase Tmar_1550 PF07071 KDGP aldolase Tmar_1551 PF03841 L-seryl-tRNA selenium transferase Tmar_1557 PF01979 Amidohydrolase family Tmar_1561 PF00403 Heavy-metal-associated domain Tmar_1568 PF01546 Peptidase family M20/M25/M40 Tmar_1569 PF00005 ABC transporter Tmar_1572 PF01266 FAD dependent oxidoreductase Tmar_1573 PF00266 Aminotransferase class-V Tmar_1575 PF02515 CoA-transferase family III Tmar_1576 PF12419 SNF2 Helicase protein Tmar_1576 PF00271 Helicase conserved C-terminal domain Tmar_1576 PF00176 SNF2 family N-terminal domain Tmar_1577 PF00578 AhpC/TSA family Tmar_1578 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Tmar_1579 PF00403 Heavy-metal-associated domain Tmar_1580 PF02583 Metal-sensitive transcriptional repressor Tmar_1581 PF00403 Heavy-metal-associated domain Tmar_1586 PF00512 His Kinase A (phospho-acceptor) domain Tmar_1586 PF00672 HAMP domain Tmar_1586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1587 PF00072 Response regulator receiver domain Tmar_1587 PF00486 Transcriptional regulatory protein, C terminal Tmar_1588 PF07732 Multicopper oxidase Tmar_1588 PF07731 Multicopper oxidase Tmar_1588 PF00394 Multicopper oxidase Tmar_1590 PF00578 AhpC/TSA family Tmar_1593 PF01040 UbiA prenyltransferase family Tmar_1596 PF00115 Cytochrome C and Quinol oxidase polypeptide I Tmar_1597 PF00510 Cytochrome c oxidase subunit III Tmar_1598 PF01435 Peptidase family M48 Tmar_1600 PF08241 Methyltransferase domain Tmar_1602 PF00403 Heavy-metal-associated domain Tmar_1603 PF13411 MerR HTH family regulatory protein Tmar_1608 PF00403 Heavy-metal-associated domain Tmar_1608 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmar_1608 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmar_1610 PF00512 His Kinase A (phospho-acceptor) domain Tmar_1610 PF18698 Histidine kinase sensor domain Tmar_1610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1610 PF00989 PAS fold Tmar_1610 PF00672 HAMP domain Tmar_1612 PF00486 Transcriptional regulatory protein, C terminal Tmar_1612 PF00072 Response regulator receiver domain Tmar_1613 PF13193 AMP-binding enzyme C-terminal domain Tmar_1613 PF00501 AMP-binding enzyme Tmar_1615 PF00072 Response regulator receiver domain Tmar_1615 PF00486 Transcriptional regulatory protein, C terminal Tmar_1616 PF00512 His Kinase A (phospho-acceptor) domain Tmar_1616 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1617 PF00005 ABC transporter Tmar_1620 PF00375 Sodium:dicarboxylate symporter family Tmar_1622 PF00378 Enoyl-CoA hydratase/isomerase Tmar_1623 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tmar_1623 PF16582 Middle domain of thiamine pyrophosphate Tmar_1623 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1624 PF00425 chorismate binding enzyme Tmar_1627 PF01053 Cys/Met metabolism PLP-dependent enzyme Tmar_1628 PF01717 Cobalamin-independent synthase, Catalytic domain Tmar_1628 PF08267 Cobalamin-independent synthase, N-terminal domain Tmar_1629 PF14824 Sirohaem biosynthesis protein central Tmar_1629 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmar_1629 PF10414 Sirohaem synthase dimerisation region Tmar_1630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tmar_1630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tmar_1631 PF01507 Phosphoadenosine phosphosulfate reductase family Tmar_1633 PF14306 PUA-like domain Tmar_1633 PF01747 ATP-sulfurylase Tmar_1634 PF00857 Isochorismatase family Tmar_1635 PF00072 Response regulator receiver domain Tmar_1635 PF00486 Transcriptional regulatory protein, C terminal Tmar_1636 PF00578 AhpC/TSA family Tmar_1637 PF01266 FAD dependent oxidoreductase Tmar_1637 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Tmar_1638 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmar_1638 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmar_1639 PF00391 PEP-utilising enzyme, mobile domain Tmar_1639 PF03610 PTS system fructose IIA component Tmar_1639 PF00381 PTS HPr component phosphorylation site Tmar_1639 PF05524 PEP-utilising enzyme, N-terminal Tmar_1640 PF02734 DAK2 domain Tmar_1641 PF02733 Dak1 domain Tmar_1642 PF00230 Major intrinsic protein Tmar_1644 PF01451 Low molecular weight phosphotyrosine protein phosphatase Tmar_1645 PF01895 PhoU domain Tmar_1646 PF00005 ABC transporter Tmar_1647 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1648 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1649 PF12849 PBP superfamily domain Tmar_1650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1650 PF00672 HAMP domain Tmar_1650 PF18698 Histidine kinase sensor domain Tmar_1650 PF00512 His Kinase A (phospho-acceptor) domain Tmar_1650 PF00989 PAS fold Tmar_1652 PF02641 Uncharacterized ACR, COG1993 Tmar_1653 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tmar_1654 PF03741 Integral membrane protein TerC family Tmar_1655 PF00206 Lyase Tmar_1655 PF10415 Fumarase C C-terminus Tmar_1660 PF04239 Protein of unknown function (DUF421) Tmar_1661 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tmar_1663 PF00753 Metallo-beta-lactamase superfamily Tmar_1664 PF03099 Biotin/lipoate A/B protein ligase family Tmar_1665 PF04055 Radical SAM superfamily Tmar_1665 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Tmar_1667 PF08827 Domain of unknown function (DUF1805) Tmar_1668 PF12822 ECF transporter, substrate-specific component Tmar_1670 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmar_1670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmar_1671 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Tmar_1671 PF00364 Biotin-requiring enzyme Tmar_1671 PF02817 e3 binding domain Tmar_1672 PF02780 Transketolase, C-terminal domain Tmar_1672 PF02779 Transketolase, pyrimidine binding domain Tmar_1673 PF00676 Dehydrogenase E1 component Tmar_1674 PF01522 Polysaccharide deacetylase Tmar_1675 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase Tmar_1675 PF04101 Glycosyltransferase family 28 C-terminal domain Tmar_1677 PF12802 MarR family Tmar_1678 PF00005 ABC transporter Tmar_1678 PF13732 Domain of unknown function (DUF4162) Tmar_1680 PF07690 Major Facilitator Superfamily Tmar_1682 PF03061 Thioesterase superfamily Tmar_1686 PF00330 Aconitase family (aconitate hydratase) Tmar_1686 PF00694 Aconitase C-terminal domain Tmar_1689 PF00037 4Fe-4S binding domain Tmar_1691 PF05343 M42 glutamyl aminopeptidase Tmar_1692 PF05343 M42 glutamyl aminopeptidase Tmar_1695 PF03123 CAT RNA binding domain Tmar_1695 PF00874 PRD domain Tmar_1696 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Tmar_1696 PF02378 Phosphotransferase system, EIIC Tmar_1696 PF00367 phosphotransferase system, EIIB Tmar_1698 PF00367 phosphotransferase system, EIIB Tmar_1698 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Tmar_1698 PF02378 Phosphotransferase system, EIIC Tmar_1701 PF02829 3H domain Tmar_1701 PF08279 HTH domain Tmar_1703 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain Tmar_1703 PF00877 NlpC/P60 family Tmar_1704 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1704 PF00005 ABC transporter Tmar_1705 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmar_1705 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1706 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1707 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_1709 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tmar_1709 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tmar_1710 PF07690 Major Facilitator Superfamily Tmar_1713 PF03551 Transcriptional regulator PadR-like family Tmar_1719 PF02754 Cysteine-rich domain Tmar_1720 PF11870 Domain of unknown function (DUF3390) Tmar_1720 PF13183 4Fe-4S dicluster domain Tmar_1720 PF02589 LUD domain Tmar_1721 PF00107 Zinc-binding dehydrogenase Tmar_1721 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_1722 PF00392 Bacterial regulatory proteins, gntR family Tmar_1723 PF00005 ABC transporter Tmar_1728 PF01925 Sulfite exporter TauE/SafE Tmar_1738 PF00311 Phosphoenolpyruvate carboxylase Tmar_1739 PF00288 GHMP kinases N terminal domain Tmar_1739 PF08544 GHMP kinases C terminal Tmar_1741 PF00291 Pyridoxal-phosphate dependent enzyme Tmar_1744 PF13193 AMP-binding enzyme C-terminal domain Tmar_1744 PF00501 AMP-binding enzyme Tmar_1744 PF16177 Acetyl-coenzyme A synthetase N-terminus Tmar_1747 PF01565 FAD binding domain Tmar_1747 PF02913 FAD linked oxidases, C-terminal domain Tmar_1748 PF01970 Tripartite tricarboxylate transporter TctA family Tmar_1750 PF03401 Tripartite tricarboxylate transporter family receptor Tmar_1751 PF00378 Enoyl-CoA hydratase/isomerase Tmar_1752 PF02515 CoA-transferase family III Tmar_1753 PF07729 FCD domain Tmar_1753 PF00392 Bacterial regulatory proteins, gntR family Tmar_1754 PF02515 CoA-transferase family III Tmar_1760 PF13478 XdhC Rossmann domain Tmar_1760 PF02625 XdhC and CoxI family Tmar_1762 PF12706 Beta-lactamase superfamily domain Tmar_1763 PF02146 Sir2 family Tmar_1765 PF02913 FAD linked oxidases, C-terminal domain Tmar_1765 PF01565 FAD binding domain Tmar_1765 PF13183 4Fe-4S dicluster domain Tmar_1766 PF00800 Prephenate dehydratase Tmar_1769 PF00463 Isocitrate lyase family Tmar_1771 PF10369 Small subunit of acetolactate synthase Tmar_1772 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Tmar_1772 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Tmar_1773 PF00682 HMGL-like Tmar_1773 PF08502 LeuA allosteric (dimerisation) domain Tmar_1774 PF00330 Aconitase family (aconitate hydratase) Tmar_1775 PF00694 Aconitase C-terminal domain Tmar_1776 PF00180 Isocitrate/isopropylmalate dehydrogenase Tmar_1777 PF00920 Dehydratase family Tmar_1778 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1778 PF00205 Thiamine pyrophosphate enzyme, central domain Tmar_1778 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tmar_1779 PF09339 IclR helix-turn-helix domain Tmar_1779 PF01614 Bacterial transcriptional regulator Tmar_1780 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tmar_1780 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Tmar_1781 PF00682 HMGL-like Tmar_1781 PF07836 DmpG-like communication domain Tmar_1782 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tmar_1783 PF00171 Aldehyde dehydrogenase family Tmar_1784 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tmar_1785 PF01361 Tautomerase enzyme Tmar_1787 PF00005 ABC transporter Tmar_1788 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tmar_1788 PF00005 ABC transporter Tmar_1790 PF02653 Branched-chain amino acid transport system / permease component Tmar_1792 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tmar_1793 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Tmar_1793 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Tmar_1794 PF01613 Flavin reductase like domain Tmar_1796 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1796 PF00005 ABC transporter Tmar_1797 PF00005 ABC transporter Tmar_1797 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1799 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_1801 PF01546 Peptidase family M20/M25/M40 Tmar_1801 PF07687 Peptidase dimerisation domain Tmar_1802 PF01546 Peptidase family M20/M25/M40 Tmar_1802 PF07687 Peptidase dimerisation domain Tmar_1803 PF00171 Aldehyde dehydrogenase family Tmar_1804 PF00107 Zinc-binding dehydrogenase Tmar_1804 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_1805 PF00753 Metallo-beta-lactamase superfamily Tmar_1807 PF00501 AMP-binding enzyme Tmar_1807 PF13193 AMP-binding enzyme C-terminal domain Tmar_1808 PF02126 Phosphotriesterase family Tmar_1809 PF12706 Beta-lactamase superfamily domain Tmar_1812 PF13452 N-terminal half of MaoC dehydratase Tmar_1815 PF00005 ABC transporter Tmar_1815 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tmar_1817 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Tmar_1818 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal Tmar_1818 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal Tmar_1819 PF00171 Aldehyde dehydrogenase family Tmar_1820 PF01557 Fumarylacetoacetate (FAA) hydrolase family Tmar_1821 PF00701 Dihydrodipicolinate synthetase family Tmar_1822 PF00392 Bacterial regulatory proteins, gntR family Tmar_1824 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Tmar_1824 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Tmar_1825 PF01425 Amidase Tmar_1828 PF07722 Peptidase C26 Tmar_1829 PF05504 Spore germination B3/ GerAC like, C-terminal Tmar_1831 PF03323 Bacillus/Clostridium GerA spore germination protein Tmar_1833 PF02667 Short chain fatty acid transporter Tmar_1837 PF01965 DJ-1/PfpI family Tmar_1840 PF00294 pfkB family carbohydrate kinase Tmar_1841 PF01116 Fructose-bisphosphate aldolase class-II Tmar_1842 PF00455 DeoR C terminal sensor domain Tmar_1842 PF08220 DeoR-like helix-turn-helix domain Tmar_1843 PF01979 Amidohydrolase family Tmar_1844 PF01380 SIS domain Tmar_1845 PF13580 SIS domain Tmar_1847 PF03611 PTS system sugar-specific permease component Tmar_1848 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Tmar_1849 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Tmar_1851 PF13193 AMP-binding enzyme C-terminal domain Tmar_1851 PF00501 AMP-binding enzyme Tmar_1852 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmar_1852 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmar_1852 PF02770 Acyl-CoA dehydrogenase, middle domain Tmar_1855 PF02581 Thiamine monophosphate synthase Tmar_1856 PF05690 Thiazole biosynthesis protein ThiG Tmar_1857 PF01266 FAD dependent oxidoreductase Tmar_1861 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Tmar_1863 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_1863 PF00107 Zinc-binding dehydrogenase Tmar_1869 PF00205 Thiamine pyrophosphate enzyme, central domain Tmar_1869 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tmar_1869 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmar_1871 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain Tmar_1871 PF07228 Stage II sporulation protein E (SpoIIE) Tmar_1873 PF03975 CheD chemotactic sensory transduction Tmar_1874 PF01584 CheW-like domain Tmar_1874 PF02895 Signal transducing histidine kinase, homodimeric domain Tmar_1874 PF01627 Hpt domain Tmar_1874 PF07194 P2 response regulator binding domain Tmar_1874 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_1875 PF01584 CheW-like domain Tmar_1877 PF00072 Response regulator receiver domain Tmar_1881 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmar_1881 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmar_1881 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmar_1881 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmar_1883 PF13439 Glycosyltransferase Family 4 Tmar_1884 PF00483 Nucleotidyl transferase Tmar_1885 PF17912 MalK OB fold domain Tmar_1885 PF03459 TOBE domain Tmar_1885 PF00005 ABC transporter Tmar_1886 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1887 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1889 PF13416 Bacterial extracellular solute-binding protein Tmar_1908 PF00120 Glutamine synthetase, catalytic domain Tmar_1909 PF00324 Amino acid permease Tmar_1914 PF07969 Amidohydrolase family Tmar_1916 PF00005 ABC transporter Tmar_1919 PF17863 AAA lid domain Tmar_1919 PF07726 ATPase family associated with various cellular activities (AAA) Tmar_1925 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Tmar_1925 PF01189 16S rRNA methyltransferase RsmB/F Tmar_1925 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Tmar_1926 PF00005 ABC transporter Tmar_1928 PF01293 Phosphoenolpyruvate carboxykinase Tmar_1931 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tmar_1931 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Tmar_1933 PF03193 RsgA GTPase Tmar_1941 PF02538 Hydantoinase B/oxoprolinase Tmar_1942 PF05378 Hydantoinase/oxoprolinase N-terminal region Tmar_1942 PF01968 Hydantoinase/oxoprolinase Tmar_1943 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1943 PF00005 ABC transporter Tmar_1944 PF00005 ABC transporter Tmar_1944 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmar_1946 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1947 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmar_1948 PF00578 AhpC/TSA family Tmar_1956 PF13732 Domain of unknown function (DUF4162) Tmar_1956 PF00005 ABC transporter Tmar_1960 PF03060 Nitronate monooxygenase Tmar_1963 PF03190 Protein of unknown function, DUF255 Tmar_1966 PF01883 Iron-sulfur cluster assembly protein Tmar_1967 PF00456 Transketolase, thiamine diphosphate binding domain Tmar_1968 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tmar_1968 PF02780 Transketolase, C-terminal domain Tmar_1968 PF02779 Transketolase, pyrimidine binding domain Tmar_1971 PF01297 Zinc-uptake complex component A periplasmic Tmar_1972 PF00950 ABC 3 transport family Tmar_1973 PF00005 ABC transporter Tmar_1975 PF01225 Mur ligase family, catalytic domain Tmar_1975 PF08245 Mur ligase middle domain Tmar_1975 PF02875 Mur ligase family, glutamate ligase domain Tmar_1978 PF08543 Phosphomethylpyrimidine kinase Tmar_1980 PF02110 Hydroxyethylthiazole kinase family Tmar_1981 PF02581 Thiamine monophosphate synthase Tmar_1982 PF07690 Major Facilitator Superfamily Tmar_1983 PF09587 Bacterial capsule synthesis protein PGA_cap Tmar_1985 PF00291 Pyridoxal-phosphate dependent enzyme Tmar_1986 PF17912 MalK OB fold domain Tmar_1986 PF00005 ABC transporter Tmar_1987 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_1990 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tmar_1991 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tmar_1991 PF01872 RibD C-terminal domain Tmar_1992 PF03070 TENA/THI-4/PQQC family Tmar_1993 PF04893 Yip1 domain Tmar_1995 PF02687 FtsX-like permease family Tmar_1995 PF12704 MacB-like periplasmic core domain Tmar_1996 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tmar_1997 PF02687 FtsX-like permease family Tmar_1997 PF12704 MacB-like periplasmic core domain Tmar_1997 PF00005 ABC transporter Tmar_1999 PF03972 MmgE/PrpD family Tmar_2000 PF00285 Citrate synthase, C-terminal domain Tmar_2004 PF00268 Ribonucleotide reductase, small chain Tmar_2005 PF00317 Ribonucleotide reductase, all-alpha domain Tmar_2005 PF03477 ATP cone domain Tmar_2005 PF02867 Ribonucleotide reductase, barrel domain Tmar_2008 PF13193 AMP-binding enzyme C-terminal domain Tmar_2008 PF00501 AMP-binding enzyme Tmar_2010 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_2010 PF00107 Zinc-binding dehydrogenase Tmar_2011 PF00753 Metallo-beta-lactamase superfamily Tmar_2011 PF00258 Flavodoxin Tmar_2011 PF00301 Rubredoxin Tmar_2012 PF00005 ABC transporter Tmar_2012 PF17912 MalK OB fold domain Tmar_2013 PF00293 NUDIX domain Tmar_2014 PF03741 Integral membrane protein TerC family Tmar_2015 PF00294 pfkB family carbohydrate kinase Tmar_2015 PF01467 Cytidylyltransferase-like Tmar_2016 PF00294 pfkB family carbohydrate kinase Tmar_2016 PF01467 Cytidylyltransferase-like Tmar_2017 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Tmar_2019 PF00455 DeoR C terminal sensor domain Tmar_2019 PF08220 DeoR-like helix-turn-helix domain Tmar_2020 PF07005 Sugar-binding N-terminal domain Tmar_2020 PF17042 Nucleotide-binding C-terminal domain Tmar_2021 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Tmar_2022 PF02447 GntP family permease Tmar_2025 PF01479 S4 domain Tmar_2025 PF00849 RNA pseudouridylate synthase Tmar_2026 PF01592 NifU-like N terminal domain Tmar_2027 PF00581 Rhodanese-like domain Tmar_2029 PF00579 tRNA synthetases class I (W and Y) Tmar_2031 PF13462 Thioredoxin Tmar_2032 PF02600 Disulfide bond formation protein DsbB Tmar_2033 PF00313 'Cold-shock' DNA-binding domain Tmar_2034 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmar_2035 PF00381 PTS HPr component phosphorylation site Tmar_2036 PF02896 PEP-utilising enzyme, TIM barrel domain Tmar_2036 PF05524 PEP-utilising enzyme, N-terminal Tmar_2036 PF00391 PEP-utilising enzyme, mobile domain Tmar_2038 PF07690 Major Facilitator Superfamily Tmar_2040 PF01926 50S ribosome-binding GTPase Tmar_2040 PF06071 Protein of unknown function (DUF933) Tmar_2042 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tmar_2042 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Tmar_2043 PF00355 Rieske [2Fe-2S] domain Tmar_2044 PF01458 Uncharacterized protein family (UPF0051) Tmar_2045 PF00156 Phosphoribosyl transferase domain Tmar_2046 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tmar_2047 PF01180 Dihydroorotate dehydrogenase Tmar_2049 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tmar_2049 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tmar_2049 PF02142 MGS-like domain Tmar_2050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tmar_2050 PF00117 Glutamine amidotransferase class-I Tmar_2051 PF01979 Amidohydrolase family Tmar_2052 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmar_2052 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmar_2053 PF00403 Heavy-metal-associated domain Tmar_2054 PF01022 Bacterial regulatory protein, arsR family Tmar_2057 PF01476 LysM domain Tmar_2057 PF03734 L,D-transpeptidase catalytic domain Tmar_2058 PF01734 Patatin-like phospholipase Tmar_2062 PF02683 Cytochrome C biogenesis protein transmembrane region Tmar_2063 PF00269 Small, acid-soluble spore proteins, alpha/beta type Tmar_2064 PF00491 Arginase family Tmar_2066 PF00730 HhH-GPD superfamily base excision DNA repair protein Tmar_2066 PF14815 NUDIX domain Tmar_2066 PF00633 Helix-hairpin-helix motif Tmar_2067 PF10502 Signal peptidase, peptidase S26 Tmar_2070 PF05547 Immune inhibitor A peptidase M6 Tmar_2070 PF00801 PKD domain Tmar_2076 PF01171 PP-loop family Tmar_2078 PF04029 2-phosphosulpholactate phosphatase Tmar_2079 PF01261 Xylose isomerase-like TIM barrel Tmar_2080 PF01578 Cytochrome C assembly protein Tmar_2080 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Tmar_2081 PF03918 Cytochrome C biogenesis protein Tmar_2082 PF07187 Protein of unknown function (DUF1405) Tmar_2083 PF07486 Cell Wall Hydrolase Tmar_2083 PF01471 Putative peptidoglycan binding domain Tmar_2084 PF01966 HD domain Tmar_2085 PF02391 MoaE protein Tmar_2086 PF01139 tRNA-splicing ligase RtcB Tmar_2088 PF00528 Binding-protein-dependent transport system inner membrane component Tmar_2089 PF00005 ABC transporter Tmar_2091 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmar_2091 PF00672 HAMP domain Tmar_2091 PF12729 Four helix bundle sensory module for signal transduction Tmar_2092 PF01565 FAD binding domain Tmar_2092 PF02913 FAD linked oxidases, C-terminal domain Tmar_2095 PF00072 Response regulator receiver domain Tmar_2096 PF08447 PAS fold Tmar_2096 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmar_2096 PF13426 PAS domain Tmar_2097 PF01584 CheW-like domain Tmar_2098 PF07194 P2 response regulator binding domain Tmar_2098 PF01627 Hpt domain Tmar_2098 PF01584 CheW-like domain Tmar_2098 PF02895 Signal transducing histidine kinase, homodimeric domain Tmar_2098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_2099 PF00072 Response regulator receiver domain Tmar_2099 PF01339 CheB methylesterase Tmar_2100 PF01739 CheR methyltransferase, SAM binding domain Tmar_2100 PF03705 CheR methyltransferase, all-alpha domain Tmar_2103 PF16868 NMT1-like family Tmar_2105 PF05343 M42 glutamyl aminopeptidase Tmar_2107 PF08241 Methyltransferase domain Tmar_2110 PF01008 Initiation factor 2 subunit family Tmar_2115 PF01520 N-acetylmuramoyl-L-alanine amidase Tmar_2117 PF00196 Bacterial regulatory proteins, luxR family Tmar_2117 PF00072 Response regulator receiver domain Tmar_2118 PF07730 Histidine kinase Tmar_2121 PF00005 ABC transporter Tmar_2123 PF00202 Aminotransferase class-III Tmar_2124 PF14489 QueF-like protein Tmar_2126 PF08240 Alcohol dehydrogenase GroES-like domain Tmar_2127 PF03979 Sigma-70 factor, region 1.1 Tmar_2127 PF00140 Sigma-70 factor, region 1.2 Tmar_2127 PF04542 Sigma-70 region 2 Tmar_2127 PF04539 Sigma-70 region 3 Tmar_2127 PF04545 Sigma-70, region 4 Tmar_2128 PF08275 DNA primase catalytic core, N-terminal domain Tmar_2128 PF01807 CHC2 zinc finger Tmar_2128 PF10410 DnaB-helicase binding domain of primase Tmar_2129 PF00108 Thiolase, N-terminal domain Tmar_2129 PF02803 Thiolase, C-terminal domain Tmar_2130 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain Tmar_2130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Tmar_2130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Tmar_2131 PF00378 Enoyl-CoA hydratase/isomerase Tmar_2133 PF01883 Iron-sulfur cluster assembly protein Tmar_2136 PF05138 Phenylacetic acid catabolic protein Tmar_2137 PF17754 MftR C-terminal domain Tmar_2137 PF00440 Bacterial regulatory proteins, tetR family Tmar_2140 PF00512 His Kinase A (phospho-acceptor) domain Tmar_2140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_2140 PF18719 ArlS sensor domain Tmar_2141 PF00486 Transcriptional regulatory protein, C terminal Tmar_2141 PF00072 Response regulator receiver domain Tmar_2143 PF02424 ApbE family Tmar_2146 PF13732 Domain of unknown function (DUF4162) Tmar_2146 PF00005 ABC transporter Tmar_2148 PF04397 LytTr DNA-binding domain Tmar_2148 PF00072 Response regulator receiver domain Tmar_2149 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmar_2149 PF06580 Histidine kinase Tmar_2149 PF07694 5TMR of 5TMR-LYT Tmar_2149 PF13492 GAF domain Tmar_2150 PF01063 Amino-transferase class IV Tmar_2151 PF01544 CorA-like Mg2+ transporter protein Tmar_2155 PF02585 GlcNAc-PI de-N-acetylase Tmar_2157 PF06965 Na+/H+ antiporter 1 Tmar_2158 PF02080 TrkA-C domain Tmar_2158 PF00999 Sodium/hydrogen exchanger family Tmar_2158 PF03471 Transporter associated domain Tmar_2159 PF02896 PEP-utilising enzyme, TIM barrel domain Tmar_2159 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tmar_2159 PF00391 PEP-utilising enzyme, mobile domain Tmar_2160 PF03618 Kinase/pyrophosphorylase Tmar_2162 PF05746 DALR anticodon binding domain Tmar_2162 PF02092 Glycyl-tRNA synthetase beta subunit Tmar_2163 PF02091 Glycyl-tRNA synthetase alpha subunit Tmar_2165 PF02565 Recombination protein O C terminal Tmar_2165 PF11967 Recombination protein O N terminal Tmar_2166 PF01769 Divalent cation transporter Tmar_2166 PF03448 MgtE intracellular N domain Tmar_2166 PF00571 CBS domain Tmar_2167 PF07650 KH domain Tmar_2167 PF01926 50S ribosome-binding GTPase Tmar_2168 PF17479 Protein of unknown function (DUF3048) C-terminal domain Tmar_2168 PF11258 Protein of unknown function (DUF3048) N-terminal domain Tmar_2170 PF02130 Uncharacterized protein family UPF0054 Tmar_2171 PF07698 7TM receptor with intracellular HD hydrolase Tmar_2171 PF07697 7TM-HD extracellular Tmar_2171 PF01966 HD domain Tmar_2172 PF02562 PhoH-like protein Tmar_2176 PF12127 SigmaW regulon antibacterial Tmar_2177 PF01957 NfeD-like C-terminal, partner-binding Tmar_2177 PF01972 Serine dehydrogenase proteinase Tmar_2179 PF01165 Ribosomal protein S21 Tmar_2180 PF01230 HIT domain Tmar_2181 PF01820 D-ala D-ala ligase N-terminus Tmar_2181 PF07478 D-ala D-ala ligase C-terminus Tmar_2182 PF04452 RNA methyltransferase Tmar_2185 PF00012 Hsp70 protein Tmar_2186 PF01025 GrpE Tmar_2187 PF01628 HrcA protein C terminal domain Tmar_2188 PF04055 Radical SAM superfamily Tmar_2188 PF06969 HemN C-terminal domain Tmar_2189 PF06421 GTP-binding protein LepA C-terminus Tmar_2189 PF00679 Elongation factor G C-terminus Tmar_2189 PF03144 Elongation factor Tu domain 2 Tmar_2189 PF00009 Elongation factor Tu GTP binding domain Tmar_2193 PF01649 Ribosomal protein S20 Tmar_2194 PF06144 DNA polymerase III, delta subunit Tmar_2196 PF10531 SLBB domain Tmar_2197 PF13603 Leucyl-tRNA synthetase, Domain 2 Tmar_2197 PF00133 tRNA synthetases class I (I, L, M and V) Tmar_2197 PF08264 Anticodon-binding domain of tRNA Tmar_2197 PF09334 tRNA synthetases class I (M) Tmar_2200 PF01966 HD domain Tmar_2201 PF01467 Cytidylyltransferase-like Tmar_2202 PF01926 50S ribosome-binding GTPase Tmar_2202 PF01018 GTP1/OBG Tmar_2202 PF09269 Domain of unknown function (DUF1967) Tmar_2204 PF01016 Ribosomal L27 protein Tmar_2205 PF04327 Cysteine protease Prp Tmar_2206 PF00829 Ribosomal prokaryotic L21 protein Tmar_2207 PF00575 S1 RNA binding domain Tmar_2207 PF10150 Ribonuclease E/G family Tmar_2208 PF00571 CBS domain Tmar_2208 PF02163 Peptidase family M50 Tmar_2209 PF01551 Peptidase family M23 Tmar_2210 PF01098 Cell cycle protein Tmar_2211 PF03776 Septum formation topological specificity factor MinE Tmar_2212 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tmar_2213 PF03775 Septum formation inhibitor MinC, C-terminal domain Tmar_2216 PF04085 rod shape-determining protein MreC Tmar_2218 PF04002 RadC-like JAB domain Tmar_2219 PF02545 Maf-like protein Tmar_2221 PF10458 Valyl tRNA synthetase tRNA binding arm Tmar_2221 PF00133 tRNA synthetases class I (I, L, M and V) Tmar_2221 PF08264 Anticodon-binding domain of tRNA Tmar_2223 PF13302 Acetyltransferase (GNAT) domain Tmar_2224 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_2224 PF05362 Lon protease (S16) C-terminal proteolytic domain Tmar_2225 PF10431 C-terminal, D2-small domain, of ClpB protein Tmar_2225 PF06689 ClpX C4-type zinc finger Tmar_2225 PF07724 AAA domain (Cdc48 subfamily) Tmar_2226 PF00574 Clp protease Tmar_2227 PF05697 Bacterial trigger factor protein (TF) Tmar_2227 PF05698 Bacterial trigger factor protein (TF) C-terminus Tmar_2227 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tmar_2228 PF17284 Spermidine synthase tetramerisation domain Tmar_2230 PF00324 Amino acid permease Tmar_2231 PF01725 Ham1 family Tmar_2232 PF13941 MutL protein Tmar_2235 PF01668 SmpB protein Tmar_2236 PF00773 RNB domain Tmar_2236 PF08206 Ribonuclease B OB domain Tmar_2236 PF17876 Cold shock domain Tmar_2236 PF00575 S1 RNA binding domain Tmar_2237 PF03030 Inorganic H+ pyrophosphatase Tmar_2238 PF03840 Preprotein translocase SecG subunit Tmar_2239 PF03952 Enolase, N-terminal domain Tmar_2239 PF00113 Enolase, C-terminal TIM barrel domain Tmar_2240 PF01676 Metalloenzyme superfamily Tmar_2240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Tmar_2241 PF00121 Triosephosphate isomerase Tmar_2242 PF00162 Phosphoglycerate kinase Tmar_2243 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tmar_2243 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tmar_2245 PF00202 Aminotransferase class-III Tmar_2246 PF01790 Prolipoprotein diacylglyceryl transferase Tmar_2248 PF00171 Aldehyde dehydrogenase family Tmar_2249 PF01475 Ferric uptake regulator family Tmar_2250 PF13180 PDZ domain Tmar_2250 PF17820 PDZ domain Tmar_2255 PF02374 Anion-transporting ATPase Tmar_2256 PF17886 HSP20-like domain found in ArsA Tmar_2256 PF02374 Anion-transporting ATPase Tmar_2258 PF13722 5TM C-terminal transporter carbon starvation CstA Tmar_2258 PF02554 Carbon starvation protein CstA Tmar_2260 PF02785 Biotin carboxylase C-terminal domain Tmar_2260 PF00289 Biotin carboxylase, N-terminal domain Tmar_2260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tmar_2261 PF00380 Ribosomal protein S9/S16 Tmar_2262 PF00572 Ribosomal protein L13 Tmar_2263 PF01416 tRNA pseudouridine synthase Tmar_2264 PF02361 Cobalt transport protein Tmar_2265 PF00005 ABC transporter Tmar_2266 PF00005 ABC transporter Tmar_2267 PF01196 Ribosomal protein L17 Tmar_2268 PF01000 RNA polymerase Rpb3/RpoA insert domain Tmar_2268 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tmar_2268 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tmar_2269 PF00411 Ribosomal protein S11 Tmar_2270 PF00416 Ribosomal protein S13/S18 Tmar_2271 PF00444 Ribosomal protein L36 Tmar_2272 PF01176 Translation initiation factor 1A / IF-1 Tmar_2274 PF00557 Metallopeptidase family M24 Tmar_2275 PF05191 Adenylate kinase, active site lid Tmar_2276 PF00344 SecY translocase Tmar_2277 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tmar_2278 PF00333 Ribosomal protein S5, N-terminal domain Tmar_2278 PF03719 Ribosomal protein S5, C-terminal domain Tmar_2279 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tmar_2280 PF00347 Ribosomal protein L6 Tmar_2281 PF00410 Ribosomal protein S8 Tmar_2282 PF00253 Ribosomal protein S14p/S29e Tmar_2283 PF00673 ribosomal L5P family C-terminus Tmar_2283 PF00281 Ribosomal protein L5 Tmar_2284 PF00467 KOW motif Tmar_2284 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tmar_2285 PF00238 Ribosomal protein L14p/L23e Tmar_2286 PF00366 Ribosomal protein S17 Tmar_2287 PF00831 Ribosomal L29 protein Tmar_2288 PF00252 Ribosomal protein L16p/L10e Tmar_2289 PF00189 Ribosomal protein S3, C-terminal domain Tmar_2289 PF07650 KH domain Tmar_2290 PF00237 Ribosomal protein L22p/L17e Tmar_2291 PF00203 Ribosomal protein S19 Tmar_2292 PF03947 Ribosomal Proteins L2, C-terminal domain Tmar_2292 PF00181 Ribosomal Proteins L2, RNA binding domain Tmar_2293 PF00276 Ribosomal protein L23 Tmar_2294 PF00573 Ribosomal protein L4/L1 family Tmar_2295 PF00297 Ribosomal protein L3 Tmar_2296 PF00338 Ribosomal protein S10p/S20e Tmar_2298 PF03144 Elongation factor Tu domain 2 Tmar_2298 PF00679 Elongation factor G C-terminus Tmar_2298 PF14492 Elongation Factor G, domain II Tmar_2298 PF03764 Elongation factor G, domain IV Tmar_2298 PF00009 Elongation factor Tu GTP binding domain Tmar_2299 PF00177 Ribosomal protein S7p/S5e Tmar_2300 PF00164 Ribosomal protein S12/S23 Tmar_2301 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Tmar_2302 PF05000 RNA polymerase Rpb1, domain 4 Tmar_2302 PF04983 RNA polymerase Rpb1, domain 3 Tmar_2302 PF00623 RNA polymerase Rpb1, domain 2 Tmar_2302 PF04997 RNA polymerase Rpb1, domain 1 Tmar_2302 PF04998 RNA polymerase Rpb1, domain 5 Tmar_2303 PF00562 RNA polymerase Rpb2, domain 6 Tmar_2303 PF10385 RNA polymerase beta subunit external 1 domain Tmar_2303 PF04565 RNA polymerase Rpb2, domain 3 Tmar_2303 PF04561 RNA polymerase Rpb2, domain 2 Tmar_2303 PF04563 RNA polymerase beta subunit Tmar_2303 PF04560 RNA polymerase Rpb2, domain 7 Tmar_2304 PF16320 Ribosomal protein L7/L12 dimerisation domain Tmar_2304 PF00542 Ribosomal protein L7/L12 C-terminal domain Tmar_2305 PF00466 Ribosomal protein L10 Tmar_2306 PF00687 Ribosomal protein L1p/L10e family Tmar_2307 PF03946 Ribosomal protein L11, N-terminal domain Tmar_2307 PF00298 Ribosomal protein L11, RNA binding domain Tmar_2308 PF00467 KOW motif Tmar_2308 PF02357 Transcription termination factor nusG Tmar_2309 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tmar_2310 PF00471 Ribosomal protein L33 Tmar_2311 PF00009 Elongation factor Tu GTP binding domain Tmar_2311 PF03144 Elongation factor Tu domain 2 Tmar_2311 PF03143 Elongation factor Tu C-terminal domain Tmar_2312 PF08281 Sigma-70, region 4 Tmar_2312 PF04542 Sigma-70 region 2 Tmar_2313 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tmar_2313 PF00588 SpoU rRNA Methylase family Tmar_2314 PF01406 tRNA synthetases class I (C) catalytic domain Tmar_2314 PF09190 DALR domain Tmar_2315 PF06426 Serine acetyltransferase, N-terminal Tmar_2315 PF00132 Bacterial transferase hexapeptide (six repeats) Tmar_2316 PF03330 Lytic transglycolase Tmar_2317 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tmar_2317 PF02542 YgbB family Tmar_2319 PF02559 CarD-like/TRCF domain Tmar_2321 PF01747 ATP-sulfurylase Tmar_2321 PF14306 PUA-like domain Tmar_2322 PF01507 Phosphoadenosine phosphosulfate reductase family Tmar_2323 PF00633 Helix-hairpin-helix motif Tmar_2323 PF10635 DisA bacterial checkpoint controller linker region Tmar_2323 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tmar_2324 PF18073 Rubredoxin metal binding domain Tmar_2325 PF02861 Clp amino terminal domain, pathogenicity island component Tmar_2325 PF07724 AAA domain (Cdc48 subfamily) Tmar_2325 PF17871 AAA lid domain Tmar_2325 PF10431 C-terminal, D2-small domain, of ClpB protein Tmar_2325 PF00004 ATPase family associated with various cellular activities (AAA) Tmar_2326 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Tmar_2328 PF17727 CtsR C-terminal dimerization domain Tmar_2328 PF05848 CtsR N-terminal HTH domain Tmar_2329 PF07969 Amidohydrolase family Tmar_2330 PF03091 CutA1 divalent ion tolerance protein Tmar_2331 PF01037 Lrp/AsnC ligand binding domain Tmar_2332 PF00202 Aminotransferase class-III Tmar_2333 PF00027 Cyclic nucleotide-binding domain Tmar_2333 PF13545 Crp-like helix-turn-helix domain Tmar_2337 PF01343 Peptidase family S49 Tmar_2338 PF06418 CTP synthase N-terminus Tmar_2338 PF00117 Glutamine amidotransferase class-I Tmar_2339 PF00750 tRNA synthetases class I (R) Tmar_2339 PF05746 DALR anticodon binding domain Tmar_2339 PF03485 Arginyl tRNA synthetase N terminal domain Tmar_2340 PF00491 Arginase family Tmar_2341 PF17284 Spermidine synthase tetramerisation domain Tmar_2343 PF00912 Transglycosylase Tmar_2343 PF00905 Penicillin binding protein transpeptidase domain Tmar_2343 PF17092 Penicillin-binding protein OB-like domain Tmar_2344 PF02590 Predicted SPOUT methyltransferase Tmar_2345 PF13180 PDZ domain Tmar_2347 PF08460 Bacterial SH3 domain Tmar_2347 PF01551 Peptidase family M23 Tmar_2349 PF00709 Adenylosuccinate synthetase Tmar_2350 PF03796 DnaB-like helicase C terminal domain Tmar_2350 PF00772 DnaB-like helicase N terminal domain Tmar_2351 PF03948 Ribosomal protein L9, C-terminal domain Tmar_2351 PF01281 Ribosomal protein L9, N-terminal domain Tmar_2353 PF01084 Ribosomal protein S18 Tmar_2354 PF00436 Single-strand binding protein family Tmar_2355 PF01250 Ribosomal protein S6 Tmar_2356 PF06107 Bacterial protein of unknown function (DUF951) Tmar_2358 PF00005 ABC transporter Tmar_2359 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tmar_2359 PF00005 ABC transporter Tmar_2360 PF02653 Branched-chain amino acid transport system / permease component Tmar_2360 PF11862 Domain of unknown function (DUF3382) Tmar_2361 PF02653 Branched-chain amino acid transport system / permease component Tmar_2363 PF06866 Protein of unknown function (DUF1256) Tmar_2364 PF00781 Diacylglycerol kinase catalytic domain Tmar_2366 PF17762 HTH domain found in ParB protein Tmar_2366 PF02195 ParB-like nuclease domain Tmar_2367 PF13614 AAA domain Tmar_2368 PF17762 HTH domain found in ParB protein Tmar_2368 PF02195 ParB-like nuclease domain Tmar_2369 PF02527 rRNA small subunit methyltransferase G Tmar_2370 PF14804 Jag N-terminus Tmar_2370 PF01424 R3H domain Tmar_2371 PF02096 60Kd inner membrane protein Tmar_2372 PF01809 Putative membrane protein insertion efficiency factor Tmar_2373 PF00825 Ribonuclease P Tmar_2374 PF00468 Ribosomal protein L34 Tmar_R0053 PF00817 impB/mucB/samB family Tmar_R0053 PF11798 IMS family HHH motif Tmar_R0053 PF11799 impB/mucB/samB family C-terminal domain