Tmar_0001 SM00382 ATPases associated with a variety of cellular activities Tmar_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Tmar_0002 SM00480 DNA polymerase III beta subunit Tmar_0003 SM00382 ATPases associated with a variety of cellular activities Tmar_0006 SM00387 Histidine kinase-like ATPases Tmar_0006 SM00433 TopoisomeraseII Tmar_0007 SM00434 DNA Topoisomerase IV Tmar_0014 SM00530 Helix-turn-helix XRE-family like proteins Tmar_0015 SM00530 Helix-turn-helix XRE-family like proteins Tmar_0016 SM00530 Helix-turn-helix XRE-family like proteins Tmar_0029 SM00507 HNH nucleases Tmar_0030 SM00382 ATPases associated with a variety of cellular activities Tmar_0031 SM00990 Tmar_0031 Tmar_0058 SM00646 Tmar_0058 Tmar_0072 SM00382 ATPases associated with a variety of cellular activities Tmar_0074 SM00493 Tmar_0074 Tmar_0082 SM00966 SpoVT / AbrB like domain Tmar_0085 SM00650 Ribosomal RNA adenine dimethylases Tmar_0097 SM01400 Tmar_0097 Tmar_0100 SM00487 DEAD-like helicases superfamily Tmar_0100 SM00490 helicase superfamily c-terminal domain Tmar_0100 SM00982 Tmar_0100 Tmar_0100 SM01058 CarD-like/TRCF domain Tmar_0101 SM00966 SpoVT / AbrB like domain Tmar_0103 SM00411 bacterial (prokaryotic) histone like domain Tmar_0112 SM00903 Flavin reductase like domain Tmar_0116 SM00382 ATPases associated with a variety of cellular activities Tmar_0128 SM00530 Helix-turn-helix XRE-family like proteins Tmar_0132 SM00331 Sigma factor PP2C-like phosphatases Tmar_0134 SM00382 ATPases associated with a variety of cellular activities Tmar_0138 SM00905 Dihydroneopterin aldolase Tmar_0151 SM00357 Cold shock protein domain Tmar_0151 SM00382 ATPases associated with a variety of cellular activities Tmar_0151 SM00959 Rho termination factor, N-terminal domain Tmar_0155 SM00937 Tmar_0155 Tmar_0158 SM00226 Low molecular weight phosphatase family Tmar_0169 SM00382 ATPases associated with a variety of cellular activities Tmar_0180 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_0190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tmar_0190 SM00267 diguanylate cyclase Tmar_0199 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_0201 SM00957 SecA DEAD-like domain Tmar_0201 SM00958 SecA preprotein cross-linking domain Tmar_0203 SM00382 ATPases associated with a variety of cellular activities Tmar_0206 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_0206 SM00245 tail specific protease Tmar_0208 SM00487 DEAD-like helicases superfamily Tmar_0208 SM00490 helicase superfamily c-terminal domain Tmar_0211 SM00729 Elongator protein 3, MiaB family, Radical SAM Tmar_0212 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tmar_0212 SM00465 GIY-YIG type nucleases (URI domain) Tmar_0225 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_0225 SM00924 MgtE intracellular N domain Tmar_0229 SM00966 SpoVT / AbrB like domain Tmar_0235 SM00881 CoA binding domain Tmar_0241 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tmar_0241 SM00866 Tmar_0241 Tmar_0244 SM01133 Tmar_0244 Tmar_0245 SM00849 Metallo-beta-lactamase superfamily Tmar_0250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tmar_0251 SM00450 Rhodanese Homology Domain Tmar_0252 SM00450 Rhodanese Homology Domain Tmar_0252 SM00849 Metallo-beta-lactamase superfamily Tmar_0253 SM00450 Rhodanese Homology Domain Tmar_0261 SM01005 Alanine racemase, C-terminal domain Tmar_0265 SM00986 Uracil DNA glycosylase superfamily Tmar_0265 SM00987 UreE urease accessory protein, C-terminal domain Tmar_0272 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_0272 SM01240 Tmar_0272 Tmar_0275 SM00852 Probable molybdopterin binding domain Tmar_0277 SM00852 Probable molybdopterin binding domain Tmar_0278 SM00883 Chaperonin 10 Kd subunit Tmar_0284 SM00387 Histidine kinase-like ATPases Tmar_0284 SM00388 His Kinase A (phosphoacceptor) domain Tmar_0286 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tmar_0286 SM00292 breast cancer carboxy-terminal domain Tmar_0286 SM00532 Ligase N family Tmar_0290 SM00382 ATPases associated with a variety of cellular activities Tmar_0291 SM00382 ATPases associated with a variety of cellular activities Tmar_0295 SM00382 ATPases associated with a variety of cellular activities Tmar_0296 SM00382 ATPases associated with a variety of cellular activities Tmar_0301 SM00845 GatB domain Tmar_0329 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_0333 SM00460 Transglutaminase/protease-like homologues Tmar_0335 SM00382 ATPases associated with a variety of cellular activities Tmar_0352 SM00849 Metallo-beta-lactamase superfamily Tmar_0359 SM00966 SpoVT / AbrB like domain Tmar_0360 SM00966 SpoVT / AbrB like domain Tmar_0370 SM00481 DNA polymerase alpha chain like domain Tmar_0377 SM00763 PrkA AAA domain Tmar_0388 SM00244 prohibitin homologues Tmar_0390 SM00822 Tmar_0390 Tmar_0397 SM00829 Enoylreductase Tmar_0422 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Tmar_0422 SM00475 5'-3' exonuclease Tmar_0422 SM00482 DNA polymerase A domain Tmar_0423 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Tmar_0423 SM01232 Tmar_0423 Tmar_0425 SM00257 Lysin motif Tmar_0433 SM00636 Tmar_0433 Tmar_0434 SM00646 Tmar_0434 Tmar_0438 SM00448 cheY-homologous receiver domain Tmar_0438 SM00850 LytTr DNA-binding domain Tmar_0439 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tmar_0439 SM00387 Histidine kinase-like ATPases Tmar_0446 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Tmar_0447 SM00287 Bacterial SH3 domain homologues Tmar_0448 SM00529 Helix-turn-helix diphteria tox regulatory element Tmar_0453 SM00422 helix_turn_helix, mercury resistance Tmar_0454 SM01230 Tmar_0454 Tmar_0458 SM00382 ATPases associated with a variety of cellular activities Tmar_0462 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_0465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tmar_0469 SM00530 Helix-turn-helix XRE-family like proteins Tmar_0471 SM00382 ATPases associated with a variety of cellular activities Tmar_0476 SM00893 Electron transfer flavoprotein domain Tmar_0477 SM00893 Electron transfer flavoprotein domain Tmar_0482 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Tmar_0486 SM00382 ATPases associated with a variety of cellular activities Tmar_0488 SM00746 metallochaperone-like domain Tmar_0498 SM00382 ATPases associated with a variety of cellular activities Tmar_0503 SM00986 Uracil DNA glycosylase superfamily Tmar_0503 SM00987 UreE urease accessory protein, C-terminal domain Tmar_0504 SM00347 helix_turn_helix multiple antibiotic resistance protein Tmar_0513 SM00382 ATPases associated with a variety of cellular activities Tmar_0522 SM00382 ATPases associated with a variety of cellular activities Tmar_0523 SM00382 ATPases associated with a variety of cellular activities Tmar_0530 SM00257 Lysin motif Tmar_0534 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tmar_0543 SM00986 Uracil DNA glycosylase superfamily Tmar_0543 SM00987 UreE urease accessory protein, C-terminal domain Tmar_0545 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_0546 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tmar_0551 SM00382 ATPases associated with a variety of cellular activities Tmar_0556 SM00382 ATPases associated with a variety of cellular activities Tmar_0566 SM00966 SpoVT / AbrB like domain Tmar_0571 SM00382 ATPases associated with a variety of cellular activities Tmar_0576 SM00382 ATPases associated with a variety of cellular activities Tmar_0577 SM00382 ATPases associated with a variety of cellular activities Tmar_0585 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tmar_0585 SM00866 Tmar_0585 Tmar_0607 SM00257 Lysin motif Tmar_0610 SM00448 cheY-homologous receiver domain Tmar_0610 SM00862 Transcriptional regulatory protein, C terminal Tmar_0611 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_0611 SM00387 Histidine kinase-like ATPases Tmar_0611 SM00388 His Kinase A (phosphoacceptor) domain Tmar_0613 SM00909 Sporulation and spore germination Tmar_0617 SM01007 Class II Aldolase and Adducin N-terminal domain Tmar_0622 SM00852 Probable molybdopterin binding domain Tmar_0623 SM00422 helix_turn_helix, mercury resistance Tmar_0624 SM01230 Tmar_0624 Tmar_0625 SM01012 Tmar_0625 Tmar_0628 SM00867 YceI-like domain Tmar_0632 SM00966 SpoVT / AbrB like domain Tmar_0636 SM00984 UDP binding domain Tmar_0639 SM00287 Bacterial SH3 domain homologues Tmar_0639 SM00646 Tmar_0639 Tmar_0650 SM00382 ATPases associated with a variety of cellular activities Tmar_0651 SM00382 ATPases associated with a variety of cellular activities Tmar_0662 SM00382 ATPases associated with a variety of cellular activities Tmar_0664 SM00382 ATPases associated with a variety of cellular activities Tmar_0684 SM00346 helix_turn_helix isocitrate lyase regulation Tmar_0688 SM00382 ATPases associated with a variety of cellular activities Tmar_0689 SM00382 ATPases associated with a variety of cellular activities Tmar_0693 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_0695 SM00028 Tetratricopeptide repeats Tmar_0695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tmar_0695 SM00331 Sigma factor PP2C-like phosphatases Tmar_0702 SM00382 ATPases associated with a variety of cellular activities Tmar_0705 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Tmar_0709 SM00382 ATPases associated with a variety of cellular activities Tmar_0713 SM00670 Large family of predicted nucleotide-binding domains Tmar_0717 SM00984 UDP binding domain Tmar_0722 SM00382 ATPases associated with a variety of cellular activities Tmar_0723 SM00382 ATPases associated with a variety of cellular activities Tmar_0727 SM00420 helix_turn_helix, Deoxyribose operon repressor Tmar_0727 SM01134 Tmar_0727 Tmar_0733 SM00966 SpoVT / AbrB like domain Tmar_0739 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Tmar_0739 SM00267 diguanylate cyclase Tmar_0754 SM00966 SpoVT / AbrB like domain Tmar_0762 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_0762 SM00382 ATPases associated with a variety of cellular activities Tmar_0771 SM00448 cheY-homologous receiver domain Tmar_0771 SM00862 Transcriptional regulatory protein, C terminal Tmar_0772 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_0772 SM00387 Histidine kinase-like ATPases Tmar_0772 SM00388 His Kinase A (phosphoacceptor) domain Tmar_0776 SM00478 endonuclease III Tmar_0776 SM00525 Tmar_0776 Tmar_0781 SM01207 Tmar_0781 Tmar_0788 SM00822 Tmar_0788 Tmar_0797 SM00421 helix_turn_helix, Lux Regulon Tmar_0800 SM00481 DNA polymerase alpha chain like domain Tmar_0820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_0825 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Tmar_0831 SM00967 RNA 2'-O ribose methyltransferase substrate binding Tmar_0837 SM00873 B3/4 domain Tmar_0837 SM00874 tRNA synthetase B5 domain Tmar_0837 SM00896 Ferredoxin-fold anticodon binding domain Tmar_0839 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tmar_0839 SM00481 DNA polymerase alpha chain like domain Tmar_0839 SM00483 DNA polymerase X family Tmar_0840 SM00463 Small MutS-related domain Tmar_0840 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Tmar_0840 SM00534 ATPase domain of DNA mismatch repair MUTS family Tmar_0842 SM00363 S4 RNA-binding domain Tmar_0848 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tmar_0849 SM00382 ATPases associated with a variety of cellular activities Tmar_0855 SM01323 Tmar_0855 Tmar_0856 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_0864 SM00740 Tmar_0864 Tmar_0872 SM00864 Tubulin/FtsZ family, GTPase domain Tmar_0872 SM00865 Tubulin/FtsZ family, C-terminal domain Tmar_0893 SM00363 S4 RNA-binding domain Tmar_0900 SM00849 Metallo-beta-lactamase superfamily Tmar_0901 SM00881 CoA binding domain Tmar_0908 SM00831 Cation transporter/ATPase, N-terminus Tmar_0914 SM00072 Guanylate kinase homologues. Tmar_0915 SM01409 Tmar_0915 Tmar_0917 SM00487 DEAD-like helicases superfamily Tmar_0917 SM00490 helicase superfamily c-terminal domain Tmar_0922 SM00331 Sigma factor PP2C-like phosphatases Tmar_0922 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Tmar_0923 SM00220 Serine/Threonine protein kinases, catalytic domain Tmar_0923 SM00740 Tmar_0923 Tmar_0929 SM00487 DEAD-like helicases superfamily Tmar_0929 SM00490 helicase superfamily c-terminal domain Tmar_0940 SM00487 DEAD-like helicases superfamily Tmar_0948 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Tmar_0949 SM00822 Tmar_0949 Tmar_0951 SM00825 Beta-ketoacyl synthase Tmar_0952 SM00358 Double-stranded RNA binding motif Tmar_0952 SM00535 Ribonuclease III family Tmar_0954 SM00968 SMC proteins Flexible Hinge Domain Tmar_0955 SM00382 ATPases associated with a variety of cellular activities Tmar_0955 SM00962 SRP54-type protein, GTPase domain Tmar_0955 SM00963 SRP54-type protein, helical bundle domain Tmar_0957 SM00382 ATPases associated with a variety of cellular activities Tmar_0957 SM00962 SRP54-type protein, GTPase domain Tmar_0957 SM00963 SRP54-type protein, helical bundle domain Tmar_0967 SM00382 ATPases associated with a variety of cellular activities Tmar_0970 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Tmar_0970 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Tmar_0970 SM00493 Tmar_0970 Tmar_0974 SM00382 ATPases associated with a variety of cellular activities Tmar_0974 SM01086 C-terminal, D2-small domain, of ClpB protein Tmar_0981 SM00382 ATPases associated with a variety of cellular activities Tmar_0997 SM00962 SRP54-type protein, GTPase domain Tmar_1011 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_1016 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_1016 SM00322 K homology RNA-binding domain Tmar_1024 SM00904 Riboflavin kinase Tmar_1025 SM01387 Tmar_1025 Tmar_1026 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_1026 SM00322 K homology RNA-binding domain Tmar_1032 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tmar_1034 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tmar_1036 SM01130 Tmar_1036 Tmar_1037 SM00849 Metallo-beta-lactamase superfamily Tmar_1041 SM00382 ATPases associated with a variety of cellular activities Tmar_1041 SM00843 Tmar_1041 Tmar_1042 SM00636 Tmar_1042 Tmar_1047 SM00636 Tmar_1047 Tmar_1050 SM00936 Penicillin-binding protein 5, C-terminal domain Tmar_1052 SM00530 Helix-turn-helix XRE-family like proteins Tmar_1053 SM00936 Penicillin-binding protein 5, C-terminal domain Tmar_1056 SM00487 DEAD-like helicases superfamily Tmar_1056 SM00490 helicase superfamily c-terminal domain Tmar_1060 SM00382 ATPases associated with a variety of cellular activities Tmar_1061 SM00852 Probable molybdopterin binding domain Tmar_1064 SM00382 ATPases associated with a variety of cellular activities Tmar_1066 SM00322 K homology RNA-binding domain Tmar_1066 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_1070 SM00481 DNA polymerase alpha chain like domain Tmar_1073 SM00729 Elongator protein 3, MiaB family, Radical SAM Tmar_1074 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Tmar_1074 SM00534 ATPase domain of DNA mismatch repair MUTS family Tmar_1075 SM00853 MutL C terminal dimerisation domain Tmar_1075 SM01340 Tmar_1075 Tmar_1080 SM00382 ATPases associated with a variety of cellular activities Tmar_1084 SM00257 Lysin motif Tmar_1086 SM00829 Enoylreductase Tmar_1090 SM00257 Lysin motif Tmar_1093 SM00491 Tmar_1093 Tmar_1094 SM00855 Phosphoglycerate mutase family Tmar_1097 SM00996 S-adenosyl-L-homocysteine hydrolase Tmar_1097 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tmar_1098 SM00347 helix_turn_helix multiple antibiotic resistance protein Tmar_1099 SM00562 Tmar_1099 Tmar_1103 SM00450 Rhodanese Homology Domain Tmar_1104 SM00232 JAB/MPN domain Tmar_1108 SM01207 Tmar_1108 Tmar_1111 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_1112 SM00563 Phosphate acyltransferases Tmar_1119 SM00893 Electron transfer flavoprotein domain Tmar_1120 SM00893 Electron transfer flavoprotein domain Tmar_1122 SM00363 S4 RNA-binding domain Tmar_1126 SM00487 DEAD-like helicases superfamily Tmar_1126 SM00490 helicase superfamily c-terminal domain Tmar_1129 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Tmar_1141 SM00387 Histidine kinase-like ATPases Tmar_1143 SM00936 Penicillin-binding protein 5, C-terminal domain Tmar_1146 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Tmar_1146 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Tmar_1151 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_1152 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_1157 SM00448 cheY-homologous receiver domain Tmar_1158 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_1159 SM00382 ATPases associated with a variety of cellular activities Tmar_1163 SM01329 Tmar_1163 Tmar_1165 SM01130 Tmar_1165 Tmar_1166 SM00363 S4 RNA-binding domain Tmar_1167 SM00861 Transketolase, pyrimidine binding domain Tmar_1184 SM00382 ATPases associated with a variety of cellular activities Tmar_1186 SM00841 Elongation factor P, C-terminal Tmar_1186 SM01185 Tmar_1186 Tmar_1204 SM00858 Tmar_1204 Tmar_1209 SM00448 cheY-homologous receiver domain Tmar_1210 SM00858 Tmar_1210 Tmar_1214 SM00421 helix_turn_helix, Lux Regulon Tmar_1214 SM00448 cheY-homologous receiver domain Tmar_1215 SM00387 Histidine kinase-like ATPases Tmar_1219 SM00732 Likely ribonuclease with RNase H fold. Tmar_1223 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Tmar_1233 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Tmar_1234 SM01133 Tmar_1234 Tmar_1236 SM00382 ATPases associated with a variety of cellular activities Tmar_1243 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_1243 SM00954 Region found in RelA / SpoT proteins Tmar_1245 SM00327 von Willebrand factor (vWF) type A domain Tmar_1246 SM00382 ATPases associated with a variety of cellular activities Tmar_1253 SM00530 Helix-turn-helix XRE-family like proteins Tmar_1256 SM00382 ATPases associated with a variety of cellular activities Tmar_1259 SM01004 Delta-aminolevulinic acid dehydratase Tmar_1265 SM00881 CoA binding domain Tmar_1267 SM00919 Malic enzyme, NAD binding domain Tmar_1267 SM01274 Tmar_1267 Tmar_1271 SM00382 ATPases associated with a variety of cellular activities Tmar_1275 SM00966 SpoVT / AbrB like domain Tmar_1279 SM00981 Tmar_1279 Tmar_1281 SM00567 E-Z type HEAT repeats Tmar_1283 SM00936 Penicillin-binding protein 5, C-terminal domain Tmar_1292 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmar_1300 SM00382 ATPases associated with a variety of cellular activities Tmar_1307 SM00382 ATPases associated with a variety of cellular activities Tmar_1316 SM00382 ATPases associated with a variety of cellular activities Tmar_1319 SM00382 ATPases associated with a variety of cellular activities Tmar_1320 SM00382 ATPases associated with a variety of cellular activities Tmar_1326 SM00382 ATPases associated with a variety of cellular activities Tmar_1332 SM00797 Allophanate hydrolase subunit 2 Tmar_1333 SM00796 Allophanate hydrolase subunit 1 Tmar_1339 SM00382 ATPases associated with a variety of cellular activities Tmar_1340 SM00382 ATPases associated with a variety of cellular activities Tmar_1341 SM00346 helix_turn_helix isocitrate lyase regulation Tmar_1346 SM00646 Tmar_1346 Tmar_1355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_1355 SM00387 Histidine kinase-like ATPases Tmar_1355 SM00388 His Kinase A (phosphoacceptor) domain Tmar_1356 SM00448 cheY-homologous receiver domain Tmar_1356 SM00862 Transcriptional regulatory protein, C terminal Tmar_1358 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_1364 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_1366 SM00851 MGS-like domain Tmar_1372 SM00421 helix_turn_helix, Lux Regulon Tmar_1372 SM00448 cheY-homologous receiver domain Tmar_1373 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_1373 SM00387 Histidine kinase-like ATPases Tmar_1388 SM00287 Bacterial SH3 domain homologues Tmar_1389 SM00448 cheY-homologous receiver domain Tmar_1392 SM00363 S4 RNA-binding domain Tmar_1392 SM01390 Tmar_1392 Tmar_1393 SM00881 CoA binding domain Tmar_1404 SM00014 Acid phosphatase homologues Tmar_1405 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tmar_1406 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_1412 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_1413 SM00729 Elongator protein 3, MiaB family, Radical SAM Tmar_1417 SM01209 Tmar_1417 Tmar_1417 SM01210 Tmar_1417 Tmar_1418 SM00798 AICARFT/IMPCHase bienzyme Tmar_1418 SM00851 MGS-like domain Tmar_1423 SM01211 Tmar_1423 Tmar_1426 SM00998 Adenylosuccinate lyase C-terminus Tmar_1427 SM01001 AIR carboxylase Tmar_1430 SM00917 LeuA allosteric (dimerisation) domain Tmar_1435 SM00382 ATPases associated with a variety of cellular activities Tmar_1438 SM00062 Bacterial periplasmic substrate-binding proteins Tmar_1442 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Tmar_1457 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_1461 SM00829 Enoylreductase Tmar_1462 SM00346 helix_turn_helix isocitrate lyase regulation Tmar_1468 SM00382 ATPases associated with a variety of cellular activities Tmar_1469 SM00382 ATPases associated with a variety of cellular activities Tmar_1478 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_1480 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tmar_1488 SM00746 metallochaperone-like domain Tmar_1490 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmar_1492 SM01092 CO dehydrogenase flavoprotein C-terminal domain Tmar_1496 SM00382 ATPases associated with a variety of cellular activities Tmar_1505 SM00729 Elongator protein 3, MiaB family, Radical SAM Tmar_1510 SM00100 Cyclic nucleotide-monophosphate binding domain Tmar_1510 SM00419 helix_turn_helix, cAMP Regulatory protein Tmar_1515 SM00829 Enoylreductase Tmar_1535 SM00327 von Willebrand factor (vWF) type A domain Tmar_1543 SM00382 ATPases associated with a variety of cellular activities Tmar_1548 SM00530 Helix-turn-helix XRE-family like proteins Tmar_1561 SM00746 metallochaperone-like domain Tmar_1562 SM00487 DEAD-like helicases superfamily Tmar_1569 SM00382 ATPases associated with a variety of cellular activities Tmar_1571 SM00062 Bacterial periplasmic substrate-binding proteins Tmar_1571 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Tmar_1576 SM00487 DEAD-like helicases superfamily Tmar_1576 SM00490 helicase superfamily c-terminal domain Tmar_1586 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_1586 SM00387 Histidine kinase-like ATPases Tmar_1586 SM00388 His Kinase A (phosphoacceptor) domain Tmar_1587 SM00448 cheY-homologous receiver domain Tmar_1587 SM00862 Transcriptional regulatory protein, C terminal Tmar_1592 SM00450 Rhodanese Homology Domain Tmar_1603 SM00422 helix_turn_helix, mercury resistance Tmar_1605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tmar_1610 SM00387 Histidine kinase-like ATPases Tmar_1610 SM00388 His Kinase A (phosphoacceptor) domain Tmar_1612 SM00448 cheY-homologous receiver domain Tmar_1612 SM00862 Transcriptional regulatory protein, C terminal Tmar_1615 SM00448 cheY-homologous receiver domain Tmar_1615 SM00862 Transcriptional regulatory protein, C terminal Tmar_1616 SM00387 Histidine kinase-like ATPases Tmar_1616 SM00388 His Kinase A (phosphoacceptor) domain Tmar_1617 SM00382 ATPases associated with a variety of cellular activities Tmar_1633 SM00382 ATPases associated with a variety of cellular activities Tmar_1635 SM00448 cheY-homologous receiver domain Tmar_1635 SM00862 Transcriptional regulatory protein, C terminal Tmar_1640 SM01120 Tmar_1640 Tmar_1644 SM00226 Low molecular weight phosphatase family Tmar_1646 SM00382 ATPases associated with a variety of cellular activities Tmar_1650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_1650 SM00387 Histidine kinase-like ATPases Tmar_1650 SM00388 His Kinase A (phosphoacceptor) domain Tmar_1663 SM00849 Metallo-beta-lactamase superfamily Tmar_1665 SM00729 Elongator protein 3, MiaB family, Radical SAM Tmar_1672 SM00861 Transketolase, pyrimidine binding domain Tmar_1677 SM00347 helix_turn_helix multiple antibiotic resistance protein Tmar_1678 SM00382 ATPases associated with a variety of cellular activities Tmar_1695 SM01061 CAT RNA binding domain Tmar_1704 SM00382 ATPases associated with a variety of cellular activities Tmar_1711 SM00318 Staphylococcal nuclease homologues Tmar_1721 SM00829 Enoylreductase Tmar_1722 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tmar_1723 SM00382 ATPases associated with a variety of cellular activities Tmar_1725 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tmar_1725 SM00419 helix_turn_helix, cAMP Regulatory protein Tmar_1743 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tmar_1753 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tmar_1753 SM00895 Tmar_1753 Tmar_1762 SM00849 Metallo-beta-lactamase superfamily Tmar_1776 SM01329 Tmar_1776 Tmar_1779 SM00346 helix_turn_helix isocitrate lyase regulation Tmar_1780 SM00859 Semialdehyde dehydrogenase, NAD binding domain Tmar_1787 SM00382 ATPases associated with a variety of cellular activities Tmar_1788 SM00382 ATPases associated with a variety of cellular activities Tmar_1794 SM00903 Flavin reductase like domain Tmar_1796 SM00382 ATPases associated with a variety of cellular activities Tmar_1797 SM00382 ATPases associated with a variety of cellular activities Tmar_1804 SM00829 Enoylreductase Tmar_1805 SM00849 Metallo-beta-lactamase superfamily Tmar_1809 SM00849 Metallo-beta-lactamase superfamily Tmar_1810 SM00822 Tmar_1810 Tmar_1815 SM00382 ATPases associated with a variety of cellular activities Tmar_1821 SM01130 Tmar_1821 Tmar_1822 SM00345 helix_turn_helix gluconate operon transcriptional repressor Tmar_1822 SM00895 Tmar_1822 Tmar_1842 SM00420 helix_turn_helix, Deoxyribose operon repressor Tmar_1842 SM01134 Tmar_1842 Tmar_1863 SM00829 Enoylreductase Tmar_1871 SM00331 Sigma factor PP2C-like phosphatases Tmar_1872 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_1874 SM00073 Histidine Phosphotransfer domain Tmar_1874 SM00260 Two component signalling adaptor domain Tmar_1874 SM00387 Histidine kinase-like ATPases Tmar_1874 SM01231 Tmar_1874 Tmar_1875 SM00260 Two component signalling adaptor domain Tmar_1876 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tmar_1876 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_1877 SM00448 cheY-homologous receiver domain Tmar_1885 SM00382 ATPases associated with a variety of cellular activities Tmar_1908 SM01230 Tmar_1908 Tmar_1916 SM00382 ATPases associated with a variety of cellular activities Tmar_1919 SM00382 ATPases associated with a variety of cellular activities Tmar_1922 SM00327 von Willebrand factor (vWF) type A domain Tmar_1926 SM00382 ATPases associated with a variety of cellular activities Tmar_1943 SM00382 ATPases associated with a variety of cellular activities Tmar_1944 SM00382 ATPases associated with a variety of cellular activities Tmar_1956 SM00382 ATPases associated with a variety of cellular activities Tmar_1968 SM00861 Transketolase, pyrimidine binding domain Tmar_1972 SM00529 Helix-turn-helix diphteria tox regulatory element Tmar_1972 SM00899 Tmar_1972 Tmar_1973 SM00382 ATPases associated with a variety of cellular activities Tmar_1983 SM00854 Bacterial capsule synthesis protein PGA_cap Tmar_1986 SM00382 ATPases associated with a variety of cellular activities Tmar_1997 SM00382 ATPases associated with a variety of cellular activities Tmar_2010 SM00829 Enoylreductase Tmar_2011 SM00849 Metallo-beta-lactamase superfamily Tmar_2012 SM00382 ATPases associated with a variety of cellular activities Tmar_2019 SM00420 helix_turn_helix, Deoxyribose operon repressor Tmar_2019 SM01134 Tmar_2019 Tmar_2027 SM00450 Rhodanese Homology Domain Tmar_2033 SM00357 Cold shock protein domain Tmar_2046 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Tmar_2049 SM00851 MGS-like domain Tmar_2049 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tmar_2049 SM01209 Tmar_2049 Tmar_2050 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Tmar_2054 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Tmar_2066 SM00478 endonuclease III Tmar_2066 SM00525 Tmar_2066 Tmar_2079 SM00518 AP endonuclease family 2 Tmar_2084 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_2089 SM00382 ATPases associated with a variety of cellular activities Tmar_2091 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tmar_2091 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_2095 SM00448 cheY-homologous receiver domain Tmar_2096 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Tmar_2096 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Tmar_2097 SM00260 Two component signalling adaptor domain Tmar_2098 SM00073 Histidine Phosphotransfer domain Tmar_2098 SM00260 Two component signalling adaptor domain Tmar_2098 SM00387 Histidine kinase-like ATPases Tmar_2098 SM01231 Tmar_2098 Tmar_2099 SM00448 cheY-homologous receiver domain Tmar_2100 SM00138 Methyltransferase, chemotaxis proteins Tmar_2106 SM00704 CDGSH-type zinc finger. Function unknown. Tmar_2115 SM00646 Tmar_2115 Tmar_2117 SM00421 helix_turn_helix, Lux Regulon Tmar_2117 SM00448 cheY-homologous receiver domain Tmar_2121 SM00382 ATPases associated with a variety of cellular activities Tmar_2126 SM00829 Enoylreductase Tmar_2128 SM00400 zinc finger Tmar_2128 SM00493 Tmar_2128 Tmar_2140 SM00387 Histidine kinase-like ATPases Tmar_2140 SM00388 His Kinase A (phosphoacceptor) domain Tmar_2141 SM00448 cheY-homologous receiver domain Tmar_2141 SM00862 Transcriptional regulatory protein, C terminal Tmar_2146 SM00382 ATPases associated with a variety of cellular activities Tmar_2148 SM00448 cheY-homologous receiver domain Tmar_2148 SM00850 LytTr DNA-binding domain Tmar_2149 SM00387 Histidine kinase-like ATPases Tmar_2154 SM01149 Tmar_2154 Tmar_2166 SM00116 Domain in cystathionine beta-synthase and other proteins. Tmar_2166 SM00924 MgtE intracellular N domain Tmar_2171 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_2184 SM00271 DnaJ molecular chaperone homology domain Tmar_2188 SM00729 Elongator protein 3, MiaB family, Radical SAM Tmar_2189 SM00838 Elongation factor G C-terminus Tmar_2195 SM00849 Metallo-beta-lactamase superfamily Tmar_2196 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tmar_2200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Tmar_2207 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_2207 SM00322 K homology RNA-binding domain Tmar_2218 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Tmar_2224 SM00382 ATPases associated with a variety of cellular activities Tmar_2225 SM00382 ATPases associated with a variety of cellular activities Tmar_2225 SM00994 ClpX C4-type zinc finger Tmar_2225 SM01086 C-terminal, D2-small domain, of ClpB protein Tmar_2229 SM00248 ankyrin repeats Tmar_2236 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_2236 SM00357 Cold shock protein domain Tmar_2236 SM00955 Tmar_2236 Tmar_2239 SM01192 Tmar_2239 Tmar_2239 SM01193 Tmar_2239 Tmar_2243 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tmar_2247 SM00530 Helix-turn-helix XRE-family like proteins Tmar_2250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_2260 SM00878 Biotin carboxylase C-terminal domain Tmar_2260 SM01209 Tmar_2260 Tmar_2265 SM00382 ATPases associated with a variety of cellular activities Tmar_2266 SM00382 ATPases associated with a variety of cellular activities Tmar_2268 SM00662 RNA polymerases D Tmar_2272 SM00316 Ribosomal protein S1-like RNA-binding domain Tmar_2284 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Tmar_2285 SM01374 Tmar_2285 Tmar_2289 SM00322 K homology RNA-binding domain Tmar_2292 SM01382 Tmar_2292 Tmar_2292 SM01383 Tmar_2292 Tmar_2296 SM01403 Tmar_2296 Tmar_2298 SM00838 Elongation factor G C-terminus Tmar_2298 SM00889 Elongation factor G, domain IV Tmar_2302 SM00663 RNA polymerase I subunit A N-terminus Tmar_2307 SM00649 Ribosomal protein L11/L12 Tmar_2308 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Tmar_2308 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Tmar_2313 SM00967 RNA 2'-O ribose methyltransferase substrate binding Tmar_2314 SM00840 Tmar_2314 Tmar_2318 SM00670 Large family of predicted nucleotide-binding domains Tmar_2319 SM01058 CarD-like/TRCF domain Tmar_2324 SM00382 ATPases associated with a variety of cellular activities Tmar_2325 SM00382 ATPases associated with a variety of cellular activities Tmar_2325 SM01086 C-terminal, D2-small domain, of ClpB protein Tmar_2331 SM00344 helix_turn_helix ASNC type Tmar_2339 SM00836 DALR anticodon binding domain Tmar_2339 SM01016 Arginyl tRNA synthetase N terminal dom Tmar_2345 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Tmar_2347 SM00257 Lysin motif Tmar_2347 SM01208 Tmar_2347 Tmar_2349 SM00788 Adenylosuccinate synthetase Tmar_2350 SM00382 ATPases associated with a variety of cellular activities Tmar_2358 SM00382 ATPases associated with a variety of cellular activities Tmar_2359 SM00382 ATPases associated with a variety of cellular activities Tmar_2364 SM00046 Diacylglycerol kinase catalytic domain (presumed) Tmar_2366 SM00470 ParB-like nuclease domain Tmar_2368 SM00470 ParB-like nuclease domain Tmar_2370 SM00393 Putative single-stranded nucleic acids-binding domain Tmar_2370 SM01245 Tmar_2370 Tmar_2372 SM01234 Tmar_2372