locus-tag class description DYI95_000005 PF11638 DnaA N-terminal domain DYI95_000005 PF08299 Bacterial dnaA protein helix-turn-helix DYI95_000005 PF00308 Bacterial dnaA protein DYI95_000010 PF00712 DNA polymerase III beta subunit, N-terminal domain DYI95_000010 PF02767 DNA polymerase III beta subunit, central domain DYI95_000010 PF02768 DNA polymerase III beta subunit, C-terminal domain DYI95_000015 PF02463 RecF/RecN/SMC N terminal domain DYI95_000030 PF01751 Toprim domain DYI95_000030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_000030 PF00986 DNA gyrase B subunit, carboxyl terminus DYI95_000030 PF00204 DNA gyrase B DYI95_000035 PF00521 DNA gyrase/topoisomerase IV, subunit A DYI95_000035 PF03989 DNA gyrase C-terminal domain, beta-propeller DYI95_000040 PF00586 AIR synthase related protein, N-terminal domain DYI95_000040 PF02769 AIR synthase related protein, C-terminal domain DYI95_000045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI95_000045 PF02403 Seryl-tRNA synthetase N-terminal domain DYI95_000070 PF03323 Bacillus/Clostridium GerA spore germination protein DYI95_000075 PF05504 Spore germination B3/ GerAC like, C-terminal DYI95_000085 PF03845 Spore germination protein DYI95_000090 PF06177 QueT transporter DYI95_000100 PF14437 MafB19-like deaminase DYI95_000120 PF12169 DNA polymerase III subunits gamma and tau domain III DYI95_000125 PF02575 YbaB/EbfC DNA-binding family DYI95_000130 PF00633 Helix-hairpin-helix motif DYI95_000130 PF02132 RecR protein DYI95_000130 PF13662 Toprim domain DYI95_000145 PF00749 tRNA synthetases class I (E and Q), catalytic domain DYI95_000180 PF02223 Thymidylate kinase DYI95_000185 PF06153 Cyclic-di-AMP receptor DYI95_000190 PF09115 DNA polymerase III, delta subunit, C terminal DYI95_000195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYI95_000205 PF18277 AbrB C-terminal domain DYI95_000205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DYI95_000210 PF09334 tRNA synthetases class I (M) DYI95_000210 PF08264 Anticodon-binding domain of tRNA DYI95_000210 PF01588 Putative tRNA binding domain DYI95_000215 PF01026 TatD related DNase DYI95_000220 PF00398 Ribosomal RNA adenine dimethylase DYI95_000225 PF04308 Ribonuclease H-like DYI95_000235 PF08544 GHMP kinases C terminal DYI95_000235 PF00288 GHMP kinases N terminal domain DYI95_000240 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYI95_000245 PF00156 Phosphoribosyl transferase domain DYI95_000245 PF09182 Bacterial purine repressor, N-terminal DYI95_000250 PF13291 ACT domain DYI95_000250 PF00291 Pyridoxal-phosphate dependent enzyme DYI95_000255 PF04026 SpoVG DYI95_000260 PF00578 AhpC/TSA family DYI95_000270 PF00132 Bacterial transferase hexapeptide (six repeats) DYI95_000270 PF12804 MobA-like NTP transferase domain DYI95_000275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DYI95_000275 PF14572 Phosphoribosyl synthetase-associated domain DYI95_000280 PF14693 Ribosomal protein TL5, C-terminal domain DYI95_000280 PF01386 Ribosomal L25p family DYI95_000285 PF01195 Peptidyl-tRNA hydrolase DYI95_000290 PF00270 DEAD/DEAH box helicase DYI95_000290 PF17757 UvrB interaction domain DYI95_000290 PF02559 CarD-like/TRCF domain DYI95_000290 PF03461 TRCF domain DYI95_000290 PF00271 Helicase conserved C-terminal domain DYI95_000295 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DYI95_000295 PF15714 Stage V sporulation protein T C-terminal, transcription factor DYI95_000300 PF03819 MazG nucleotide pyrophosphohydrolase domain DYI95_000305 PF00216 Bacterial DNA-binding protein DYI95_000340 PF02690 Na+/Pi-cotransporter DYI95_000345 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_000350 PF01613 Flavin reductase like domain DYI95_000360 PF01592 NifU-like N terminal domain DYI95_000365 PF00266 Aminotransferase class-V DYI95_000370 PF01458 Uncharacterized protein family (UPF0051) DYI95_000375 PF00005 ABC transporter DYI95_000380 PF05343 M42 glutamyl aminopeptidase DYI95_000385 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DYI95_000395 PF02910 Fumarate reductase flavoprotein C-term DYI95_000395 PF00890 FAD binding domain DYI95_000400 PF13085 2Fe-2S iron-sulfur cluster binding domain DYI95_000410 PF01923 Cobalamin adenosyltransferase DYI95_000425 PF00892 EamA-like transporter family DYI95_000430 PF01658 Myo-inositol-1-phosphate synthase DYI95_000435 PF01066 CDP-alcohol phosphatidyltransferase DYI95_000435 PF12804 MobA-like NTP transferase domain DYI95_000440 PF02586 SOS response associated peptidase (SRAP) DYI95_000460 PF08704 tRNA methyltransferase complex GCD14 subunit DYI95_000470 PF11734 TilS substrate C-terminal domain DYI95_000470 PF01171 PP-loop family DYI95_000475 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_000475 PF17862 AAA+ lid domain DYI95_000475 PF06480 FtsH Extracellular DYI95_000475 PF01434 Peptidase family M41 DYI95_000480 PF13735 tRNA nucleotidyltransferase domain 2 putative DYI95_000480 PF12627 Probable RNA and SrmB- binding site of polymerase A DYI95_000480 PF01743 Poly A polymerase head domain DYI95_000485 PF01321 Creatinase/Prolidase N-terminal domain DYI95_000485 PF00557 Metallopeptidase family M24 DYI95_000490 PF00221 Aromatic amino acid lyase DYI95_000495 PF00809 Pterin binding enzyme DYI95_000500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DYI95_000505 PF03576 Peptidase family S58 DYI95_000510 PF03309 Type III pantothenate kinase DYI95_000515 PF02577 Bifunctional nuclease DYI95_000525 PF01272 Transcription elongation factor, GreA/GreB, C-term DYI95_000525 PF03449 Transcription elongation factor, N-terminal DYI95_000530 PF00152 tRNA synthetases class II (D, K and N) DYI95_000530 PF01336 OB-fold nucleic acid binding domain DYI95_000560 PF00485 Phosphoribulokinase / Uridine kinase family DYI95_000570 PF05922 Peptidase inhibitor I9 DYI95_000570 PF00082 Subtilase family DYI95_000575 PF00923 Transaldolase/Fructose-6-phosphate aldolase DYI95_000580 PF07497 Rho termination factor, RNA-binding domain DYI95_000580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI95_000580 PF07498 Rho termination factor, N-terminal domain DYI95_000590 PF01197 Ribosomal protein L31 DYI95_000600 PF03462 PCRF domain DYI95_000600 PF00472 RF-1 domain DYI95_000605 PF05175 Methyltransferase small domain DYI95_000605 PF17827 PrmC N-terminal domain DYI95_000610 PF01300 Telomere recombination DYI95_000610 PF03481 Putative GTP-binding controlling metal-binding DYI95_000615 PF02502 Ribose/Galactose Isomerase DYI95_000620 PF00953 Glycosyl transferase family 4 DYI95_000625 PF02350 UDP-N-acetylglucosamine 2-epimerase DYI95_000640 PF00119 ATP synthase A chain DYI95_000645 PF00137 ATP synthase subunit C DYI95_000650 PF00430 ATP synthase B/B' CF(0) DYI95_000655 PF00213 ATP synthase delta (OSCP) subunit DYI95_000660 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI95_000660 PF00306 ATP synthase alpha/beta chain, C terminal domain DYI95_000660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI95_000665 PF00231 ATP synthase DYI95_000670 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI95_000670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI95_000675 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DYI95_000675 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DYI95_000680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYI95_000685 PF08486 Stage II sporulation protein DYI95_000695 PF12116 Stage III sporulation protein D DYI95_000705 PF00460 Flagella basal body rod protein DYI95_000705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYI95_000710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYI95_000710 PF00460 Flagella basal body rod protein DYI95_000715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DYI95_000715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DYI95_000720 PF07977 FabA-like domain DYI95_000725 PF00575 S1 RNA binding domain DYI95_000725 PF09371 Tex-like protein N-terminal domain DYI95_000725 PF16921 Tex protein YqgF-like domain DYI95_000725 PF17674 HHH domain DYI95_000735 PF00669 Bacterial flagellin N-terminal helical region DYI95_000735 PF00700 Bacterial flagellin C-terminal helical region DYI95_000745 PF07195 Flagellar hook-associated protein 2 C-terminus DYI95_000745 PF02465 Flagellar hook-associated protein 2 N-terminus DYI95_000750 PF02561 Flagellar protein FliS DYI95_000760 PF02773 S-adenosylmethionine synthetase, C-terminal domain DYI95_000760 PF00438 S-adenosylmethionine synthetase, N-terminal domain DYI95_000760 PF02772 S-adenosylmethionine synthetase, central domain DYI95_000770 PF00072 Response regulator receiver domain DYI95_000770 PF00990 Diguanylate cyclase, GGDEF domain DYI95_000775 PF00156 Phosphoribosyl transferase domain DYI95_000790 PF07196 Flagellin hook IN motif DYI95_000790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYI95_000795 PF07196 Flagellin hook IN motif DYI95_000795 PF00669 Bacterial flagellin N-terminal helical region DYI95_000795 PF00700 Bacterial flagellin C-terminal helical region DYI95_000800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYI95_000800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYI95_000800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYI95_000800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYI95_000805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DYI95_000805 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DYI95_000815 PF01966 HD domain DYI95_000815 PF00072 Response regulator receiver domain DYI95_000825 PF02810 SEC-C motif DYI95_000825 PF07517 SecA DEAD-like domain DYI95_000825 PF07516 SecA Wing and Scaffold domain DYI95_000825 PF01043 SecA preprotein cross-linking domain DYI95_000835 PF00005 ABC transporter DYI95_000840 PF18075 FtsX extracellular domain DYI95_000840 PF02687 FtsX-like permease family DYI95_000845 PF01476 LysM domain DYI95_000845 PF01551 Peptidase family M23 DYI95_000845 PF08525 Opacity-associated protein A N-terminal motif DYI95_000850 PF03572 Peptidase family S41 DYI95_000850 PF00595 PDZ domain DYI95_000855 PF18509 Magnetochrome domain DYI95_000855 PF17820 PDZ domain DYI95_000860 PF12344 Ultra-violet resistance protein B DYI95_000860 PF02151 UvrB/uvrC motif DYI95_000860 PF00271 Helicase conserved C-terminal domain DYI95_000860 PF04851 Type III restriction enzyme, res subunit DYI95_000860 PF17757 UvrB interaction domain DYI95_000865 PF17755 UvrA DNA-binding domain DYI95_000865 PF17760 UvrA interaction domain DYI95_000870 PF01594 AI-2E family transporter DYI95_000875 PF04055 Radical SAM superfamily DYI95_000880 PF01541 GIY-YIG catalytic domain DYI95_000880 PF08459 UvrC Helix-hairpin-helix N-terminal DYI95_000880 PF02151 UvrB/uvrC motif DYI95_000885 PF00205 Thiamine pyrophosphate enzyme, central domain DYI95_000885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI95_000885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_000895 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DYI95_000900 PF01220 Dehydroquinase class II DYI95_000905 PF01761 3-dehydroquinate synthase DYI95_000910 PF01264 Chorismate synthase DYI95_000915 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DYI95_000915 PF01488 Shikimate / quinate 5-dehydrogenase DYI95_000915 PF08501 Shikimate dehydrogenase substrate binding domain DYI95_000920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DYI95_000925 PF02153 Prephenate dehydrogenase DYI95_000930 PF00793 DAHP synthetase I family DYI95_000930 PF18152 DAHP synthase ferredoxin-like domain DYI95_000935 PF07736 Chorismate mutase type I DYI95_000950 PF03448 MgtE intracellular N domain DYI95_000950 PF01769 Divalent cation transporter DYI95_000950 PF00571 CBS domain DYI95_000955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI95_000955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI95_000975 PF03668 P-loop ATPase protein family DYI95_000980 PF01933 Uncharacterised protein family UPF0052 DYI95_000985 PF10298 WhiA N-terminal LAGLIDADG-like domain DYI95_000985 PF02650 WhiA C-terminal HTH domain DYI95_000985 PF14527 WhiA LAGLIDADG-like domain DYI95_000990 PF00348 Polyprenyl synthetase DYI95_000995 PF02629 CoA binding domain DYI95_000995 PF06971 Putative DNA-binding protein N-terminus DYI95_001000 PF02457 DisA bacterial checkpoint controller nucleotide-binding DYI95_001010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DYI95_001010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DYI95_001010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DYI95_001010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DYI95_001015 PF01380 SIS domain DYI95_001025 PF00005 ABC transporter DYI95_001030 PF00392 Bacterial regulatory proteins, gntR family DYI95_001030 PF07702 UTRA domain DYI95_001035 PF00294 pfkB family carbohydrate kinase DYI95_001040 PF01156 Inosine-uridine preferring nucleoside hydrolase DYI95_001045 PF01791 DeoC/LacD family aldolase DYI95_001050 PF00753 Metallo-beta-lactamase superfamily DYI95_001055 PF02073 Thermophilic metalloprotease (M29) DYI95_001060 PF05175 Methyltransferase small domain DYI95_001070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_001070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI95_001085 PF00581 Rhodanese-like domain DYI95_001090 PF00581 Rhodanese-like domain DYI95_001090 PF00753 Metallo-beta-lactamase superfamily DYI95_001095 PF00581 Rhodanese-like domain DYI95_001095 PF01206 Sulfurtransferase TusA DYI95_001100 PF13686 DsrE/DsrF/DrsH-like family DYI95_001105 PF01925 Sulfite exporter TauE/SafE DYI95_001120 PF09125 Cytochrome C oxidase subunit II, transmembrane DYI95_001120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DYI95_001125 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYI95_001130 PF01648 4'-phosphopantetheinyl transferase superfamily DYI95_001135 PF01256 Carbohydrate kinase DYI95_001135 PF03853 YjeF-related protein N-terminus DYI95_001140 PF00842 Alanine racemase, C-terminal domain DYI95_001140 PF01168 Alanine racemase, N-terminal domain DYI95_001150 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DYI95_001160 PF03167 Uracil DNA glycosylase superfamily DYI95_001165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DYI95_001175 PF00583 Acetyltransferase (GNAT) family DYI95_001180 PF00814 Glycoprotease family DYI95_001185 PF14602 Hexapeptide repeat of succinyl-transferase DYI95_001190 PF02875 Mur ligase family, glutamate ligase domain DYI95_001190 PF08245 Mur ligase middle domain DYI95_001190 PF01225 Mur ligase family, catalytic domain DYI95_001195 PF00478 IMP dehydrogenase / GMP reductase domain DYI95_001195 PF00571 CBS domain DYI95_001200 PF02875 Mur ligase family, glutamate ligase domain DYI95_001200 PF08245 Mur ligase middle domain DYI95_001205 PF00108 Thiolase, N-terminal domain DYI95_001205 PF02803 Thiolase, C-terminal domain DYI95_001210 PF03453 MoeA N-terminal region (domain I and II) DYI95_001210 PF00994 Probable molybdopterin binding domain DYI95_001210 PF03454 MoeA C-terminal region (domain IV) DYI95_001215 PF01967 MoaC family DYI95_001220 PF01967 MoaC family DYI95_001220 PF00994 Probable molybdopterin binding domain DYI95_001225 PF00166 Chaperonin 10 Kd subunit DYI95_001230 PF00118 TCP-1/cpn60 chaperonin family DYI95_001235 PF00958 GMP synthase C terminal domain DYI95_001235 PF00117 Glutamine amidotransferase class-I DYI95_001240 PF13188 PAS domain DYI95_001240 PF00989 PAS fold DYI95_001240 PF00512 His Kinase A (phospho-acceptor) domain DYI95_001240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_001240 PF13426 PAS domain DYI95_001245 PF00580 UvrD/REP helicase N-terminal domain DYI95_001245 PF13361 UvrD-like helicase C-terminal domain DYI95_001245 PF00580 UvrD/REP helicase N-terminal domain DYI95_001245 PF13361 UvrD-like helicase C-terminal domain DYI95_001250 PF01653 NAD-dependent DNA ligase adenylation domain DYI95_001250 PF03120 NAD-dependent DNA ligase OB-fold domain DYI95_001250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DYI95_001250 PF12826 Helix-hairpin-helix motif DYI95_001250 PF00533 BRCA1 C Terminus (BRCT) domain DYI95_001255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_001255 PF00005 ABC transporter DYI95_001260 PF00005 ABC transporter DYI95_001260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_001265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_001270 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_001275 PF12911 N-terminal TM domain of oligopeptide transport permease C DYI95_001275 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_001280 PF00005 ABC transporter DYI95_001280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_001285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_001285 PF00005 ABC transporter DYI95_001295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_001295 PF00005 ABC transporter DYI95_001300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_001300 PF00005 ABC transporter DYI95_001305 PF07687 Peptidase dimerisation domain DYI95_001305 PF01546 Peptidase family M20/M25/M40 DYI95_001310 PF00557 Metallopeptidase family M24 DYI95_001310 PF01321 Creatinase/Prolidase N-terminal domain DYI95_001315 PF02686 Glu-tRNAGln amidotransferase C subunit DYI95_001320 PF01425 Amidase DYI95_001325 PF02637 GatB domain DYI95_001325 PF02934 GatB/GatE catalytic domain DYI95_001330 PF00873 AcrB/AcrD/AcrF family DYI95_001335 PF01884 PcrB family DYI95_001340 PF01063 Amino-transferase class IV DYI95_001350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_001355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DYI95_001360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYI95_001365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DYI95_001370 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DYI95_001375 PF00146 NADH dehydrogenase DYI95_001380 PF12838 4Fe-4S dicluster domain DYI95_001385 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DYI95_001390 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DYI95_001395 PF00361 Proton-conducting membrane transporter DYI95_001395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DYI95_001395 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DYI95_001400 PF00361 Proton-conducting membrane transporter DYI95_001400 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DYI95_001405 PF00361 Proton-conducting membrane transporter DYI95_001415 PF00999 Sodium/hydrogen exchanger family DYI95_001425 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DYI95_001425 PF00034 Cytochrome c DYI95_001425 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DYI95_001440 PF00033 Cytochrome b/b6/petB DYI95_001445 PF03477 ATP cone domain DYI95_001450 PF03477 ATP cone domain DYI95_001450 PF02867 Ribonucleotide reductase, barrel domain DYI95_001450 PF00317 Ribonucleotide reductase, all-alpha domain DYI95_001460 PF00892 EamA-like transporter family DYI95_001480 PF00156 Phosphoribosyl transferase domain DYI95_001485 PF13559 Domain of unknown function (DUF4129) DYI95_001485 PF11992 Domain of unknown function (DUF3488) DYI95_001485 PF01841 Transglutaminase-like superfamily DYI95_001495 PF07726 ATPase family associated with various cellular activities (AAA) DYI95_001495 PF17863 AAA lid domain DYI95_001500 PF05958 tRNA (Uracil-5-)-methyltransferase DYI95_001505 PF00578 AhpC/TSA family DYI95_001520 PF00561 alpha/beta hydrolase fold DYI95_001525 PF06207 Protein of unknown function (DUF1002) DYI95_001530 PF09335 SNARE associated Golgi protein DYI95_001540 PF08486 Stage II sporulation protein DYI95_001555 PF12706 Beta-lactamase superfamily domain DYI95_001560 PF00155 Aminotransferase class I and II DYI95_001565 PF02875 Mur ligase family, glutamate ligase domain DYI95_001565 PF08245 Mur ligase middle domain DYI95_001585 PF01208 Uroporphyrinogen decarboxylase (URO-D) DYI95_001590 PF06491 Disulphide isomerase DYI95_001595 PF02566 OsmC-like protein DYI95_001600 PF01925 Sulfite exporter TauE/SafE DYI95_001605 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYI95_001605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYI95_001605 PF14579 Helix-hairpin-helix motif DYI95_001605 PF02811 PHP domain DYI95_001610 PF04608 Phosphatidylglycerophosphatase A DYI95_001620 PF02548 Ketopantoate hydroxymethyltransferase DYI95_001625 PF02569 Pantoate-beta-alanine ligase DYI95_001630 PF04285 Protein of unknown function (DUF444) DYI95_001635 PF04293 SpoVR like protein DYI95_001640 PF06798 PrkA serine protein kinase C-terminal domain DYI95_001640 PF08298 PrkA AAA domain DYI95_001650 PF00365 Phosphofructokinase DYI95_001655 PF02887 Pyruvate kinase, alpha/beta domain DYI95_001655 PF00224 Pyruvate kinase, barrel domain DYI95_001655 PF00391 PEP-utilising enzyme, mobile domain DYI95_001660 PF10609 NUBPL iron-transfer P-loop NTPase DYI95_001660 PF01883 Iron-sulfur cluster assembly protein DYI95_001665 PF12146 Serine aminopeptidase, S33 DYI95_001670 PF01842 ACT domain DYI95_001670 PF13840 ACT domain DYI95_001670 PF00696 Amino acid kinase family DYI95_001685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYI95_001725 PF00106 short chain dehydrogenase DYI95_001730 PF00108 Thiolase, N-terminal domain DYI95_001730 PF02803 Thiolase, C-terminal domain DYI95_001735 PF00501 AMP-binding enzyme DYI95_001735 PF13193 AMP-binding enzyme C-terminal domain DYI95_001740 PF00501 AMP-binding enzyme DYI95_001740 PF13193 AMP-binding enzyme C-terminal domain DYI95_001755 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_001755 PF00107 Zinc-binding dehydrogenase DYI95_001760 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_001760 PF00107 Zinc-binding dehydrogenase DYI95_001765 PF07883 Cupin domain DYI95_001780 PF02628 Cytochrome oxidase assembly protein DYI95_001785 PF01040 UbiA prenyltransferase family DYI95_001790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DYI95_001795 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYI95_001800 PF00510 Cytochrome c oxidase subunit III DYI95_001805 PF00510 Cytochrome c oxidase subunit III DYI95_001820 PF00188 Cysteine-rich secretory protein family DYI95_001830 PF01551 Peptidase family M23 DYI95_001840 PF08281 Sigma-70, region 4 DYI95_001840 PF04542 Sigma-70 region 2 DYI95_001850 PF00082 Subtilase family DYI95_001855 PF01367 5'-3' exonuclease, C-terminal SAM fold DYI95_001855 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DYI95_001855 PF00476 DNA polymerase family A DYI95_001860 PF06827 Zinc finger found in FPG and IleRS DYI95_001860 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DYI95_001860 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DYI95_001870 PF07486 Cell Wall Hydrolase DYI95_001870 PF01471 Putative peptidoglycan binding domain DYI95_001875 PF07486 Cell Wall Hydrolase DYI95_001875 PF01471 Putative peptidoglycan binding domain DYI95_001885 PF01121 Dephospho-CoA kinase DYI95_001905 PF01872 RibD C-terminal domain DYI95_001910 PF00809 Pterin binding enzyme DYI95_001925 PF01520 N-acetylmuramoyl-L-alanine amidase DYI95_001935 PF00083 Sugar (and other) transporter DYI95_001940 PF16177 Acetyl-coenzyme A synthetase N-terminus DYI95_001940 PF00501 AMP-binding enzyme DYI95_001940 PF13193 AMP-binding enzyme C-terminal domain DYI95_001945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYI95_001945 PF01000 RNA polymerase Rpb3/RpoA insert domain DYI95_001945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYI95_001950 PF01380 SIS domain DYI95_001950 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain DYI95_001970 PF01325 Iron dependent repressor, N-terminal DNA binding domain DYI95_001970 PF02742 Iron dependent repressor, metal binding and dimerisation domain DYI95_001985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DYI95_001995 PF13411 MerR HTH family regulatory protein DYI95_002000 PF03951 Glutamine synthetase, beta-Grasp domain DYI95_002000 PF00120 Glutamine synthetase, catalytic domain DYI95_002015 PF03552 Cellulose synthase DYI95_002015 PF03170 Bacterial cellulose synthase subunit DYI95_002015 PF00535 Glycosyl transferase family 2 DYI95_002015 PF07238 PilZ domain DYI95_002025 PF00005 ABC transporter DYI95_002025 PF00664 ABC transporter transmembrane region DYI95_002045 PF01116 Fructose-bisphosphate aldolase class-II DYI95_002050 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DYI95_002060 PF00072 Response regulator receiver domain DYI95_002060 PF00196 Bacterial regulatory proteins, luxR family DYI95_002080 PF01965 DJ-1/PfpI family DYI95_002090 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_002100 PF01522 Polysaccharide deacetylase DYI95_002105 PF00005 ABC transporter DYI95_002125 PF00440 Bacterial regulatory proteins, tetR family DYI95_002125 PF17922 Tetracyclin repressor-like, C-terminal domain DYI95_002130 PF01012 Electron transfer flavoprotein domain DYI95_002135 PF00766 Electron transfer flavoprotein FAD-binding domain DYI95_002135 PF01012 Electron transfer flavoprotein domain DYI95_002140 PF02754 Cysteine-rich domain DYI95_002140 PF13183 4Fe-4S dicluster domain DYI95_002140 PF02665 Nitrate reductase gamma subunit DYI95_002145 PF00501 AMP-binding enzyme DYI95_002145 PF13193 AMP-binding enzyme C-terminal domain DYI95_002150 PF03061 Thioesterase superfamily DYI95_002160 PF13378 Enolase C-terminal domain-like DYI95_002160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DYI95_002175 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_002180 PF00005 ABC transporter DYI95_002185 PF16916 Dimerisation domain of Zinc Transporter DYI95_002185 PF01545 Cation efflux family DYI95_002195 PF01938 TRAM domain DYI95_002195 PF05958 tRNA (Uracil-5-)-methyltransferase DYI95_002205 PF01425 Amidase DYI95_002215 PF00535 Glycosyl transferase family 2 DYI95_002225 PF01547 Bacterial extracellular solute-binding protein DYI95_002235 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_002245 PF01370 NAD dependent epimerase/dehydratase family DYI95_002255 PF03030 Inorganic H+ pyrophosphatase DYI95_002260 PF03167 Uracil DNA glycosylase superfamily DYI95_002270 PF07690 Major Facilitator Superfamily DYI95_002285 PF00480 ROK family DYI95_002295 PF04542 Sigma-70 region 2 DYI95_002295 PF08281 Sigma-70, region 4 DYI95_002305 PF00005 ABC transporter DYI95_002315 PF00005 ABC transporter DYI95_002330 PF00266 Aminotransferase class-V DYI95_002340 PF13458 Periplasmic binding protein DYI95_002355 PF09383 NIL domain DYI95_002355 PF00005 ABC transporter DYI95_002360 PF00005 ABC transporter DYI95_002365 PF00378 Enoyl-CoA hydratase/isomerase DYI95_002370 PF02388 FemAB family DYI95_002375 PF00842 Alanine racemase, C-terminal domain DYI95_002375 PF01168 Alanine racemase, N-terminal domain DYI95_002380 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DYI95_002385 PF01910 Thiamine-binding protein DYI95_002390 PF07690 Major Facilitator Superfamily DYI95_002395 PF01476 LysM domain DYI95_002395 PF05257 CHAP domain DYI95_002400 PF01680 SOR/SNZ family DYI95_002405 PF01174 SNO glutamine amidotransferase family DYI95_002410 PF02632 BioY family DYI95_002415 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYI95_002415 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYI95_002420 PF01960 ArgJ family DYI95_002425 PF00696 Amino acid kinase family DYI95_002430 PF00202 Aminotransferase class-III DYI95_002435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYI95_002435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYI95_002450 PF00206 Lyase DYI95_002450 PF14698 Argininosuccinate lyase C-terminal DYI95_002460 PF03576 Peptidase family S58 DYI95_002465 PF03167 Uracil DNA glycosylase superfamily DYI95_002470 PF00111 2Fe-2S iron-sulfur cluster binding domain DYI95_002470 PF01799 [2Fe-2S] binding domain DYI95_002475 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DYI95_002475 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DYI95_002480 PF00941 FAD binding domain in molybdopterin dehydrogenase DYI95_002480 PF03450 CO dehydrogenase flavoprotein C-terminal domain DYI95_002500 PF00982 Glycosyltransferase family 20 DYI95_002510 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_002515 PF00005 ABC transporter DYI95_002515 PF00571 CBS domain DYI95_002530 PF02225 PA domain DYI95_002530 PF00082 Subtilase family DYI95_002530 PF05922 Peptidase inhibitor I9 DYI95_002530 PF13860 FlgD Ig-like domain DYI95_002535 PF02585 GlcNAc-PI de-N-acetylase DYI95_002560 PF01475 Ferric uptake regulator family DYI95_002565 PF00005 ABC transporter DYI95_002570 PF00950 ABC 3 transport family DYI95_002575 PF01297 Zinc-uptake complex component A periplasmic DYI95_002580 PF07690 Major Facilitator Superfamily DYI95_002590 PF02630 SCO1/SenC DYI95_002600 PF00011 Hsp20/alpha crystallin family DYI95_002610 PF03069 Acetamidase/Formamidase family DYI95_002615 PF00326 Prolyl oligopeptidase family DYI95_002615 PF07676 WD40-like Beta Propeller Repeat DYI95_002625 PF01464 Transglycosylase SLT domain DYI95_002630 PF03180 NLPA lipoprotein DYI95_002635 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_002640 PF09383 NIL domain DYI95_002640 PF00005 ABC transporter DYI95_002645 PF13537 Glutamine amidotransferase domain DYI95_002645 PF00733 Asparagine synthase DYI95_002650 PF13458 Periplasmic binding protein DYI95_002655 PF02653 Branched-chain amino acid transport system / permease component DYI95_002660 PF02653 Branched-chain amino acid transport system / permease component DYI95_002660 PF11862 Domain of unknown function (DUF3382) DYI95_002665 PF00005 ABC transporter DYI95_002665 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYI95_002670 PF00005 ABC transporter DYI95_002680 PF00892 EamA-like transporter family DYI95_002690 PF01915 Glycosyl hydrolase family 3 C-terminal domain DYI95_002690 PF00933 Glycosyl hydrolase family 3 N terminal domain DYI95_002695 PF07075 Protein of unknown function (DUF1343) DYI95_002700 PF02378 Phosphotransferase system, EIIC DYI95_002700 PF00367 phosphotransferase system, EIIB DYI95_002705 PF13580 SIS domain DYI95_002710 PF07702 UTRA domain DYI95_002710 PF00392 Bacterial regulatory proteins, gntR family DYI95_002715 PF01979 Amidohydrolase family DYI95_002720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DYI95_002730 PF01619 Proline dehydrogenase DYI95_002735 PF01502 Phosphoribosyl-AMP cyclohydrolase DYI95_002735 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DYI95_002740 PF00977 Histidine biosynthesis protein DYI95_002745 PF00977 Histidine biosynthesis protein DYI95_002750 PF00117 Glutamine amidotransferase class-I DYI95_002755 PF00475 Imidazoleglycerol-phosphate dehydratase DYI95_002760 PF00815 Histidinol dehydrogenase DYI95_002765 PF01634 ATP phosphoribosyltransferase DYI95_002770 PF13393 Histidyl-tRNA synthetase DYI95_002775 PF01266 FAD dependent oxidoreductase DYI95_002780 PF00892 EamA-like transporter family DYI95_002785 PF02423 Ornithine cyclodeaminase/mu-crystallin family DYI95_002795 PF01371 Trp repressor protein DYI95_002820 PF01476 LysM domain DYI95_002840 PF00512 His Kinase A (phospho-acceptor) domain DYI95_002840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_002840 PF00672 HAMP domain DYI95_002845 PF00156 Phosphoribosyl transferase domain DYI95_002870 PF00107 Zinc-binding dehydrogenase DYI95_002870 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_002875 PF00596 Class II Aldolase and Adducin N-terminal domain DYI95_002895 PF00924 Mechanosensitive ion channel DYI95_002900 PF05223 NTF2-like N-terminal transpeptidase domain DYI95_002900 PF03717 Penicillin-binding Protein dimerisation domain DYI95_002900 PF00905 Penicillin binding protein transpeptidase domain DYI95_002905 PF13411 MerR HTH family regulatory protein DYI95_002910 PF03951 Glutamine synthetase, beta-Grasp domain DYI95_002910 PF00120 Glutamine synthetase, catalytic domain DYI95_002915 PF03861 ANTAR domain DYI95_002915 PF00072 Response regulator receiver domain DYI95_002920 PF00909 Ammonium Transporter Family DYI95_002925 PF00733 Asparagine synthase DYI95_002925 PF13537 Glutamine amidotransferase domain DYI95_002930 PF04264 YceI-like domain DYI95_002935 PF01638 HxlR-like helix-turn-helix DYI95_002940 PF00135 Carboxylesterase family DYI95_002945 PF01645 Conserved region in glutamate synthase DYI95_002945 PF00310 Glutamine amidotransferases class-II DYI95_002945 PF04898 Glutamate synthase central domain DYI95_002945 PF01493 GXGXG motif DYI95_002965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYI95_002965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYI95_002965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYI95_002970 PF00534 Glycosyl transferases group 1 DYI95_002970 PF13439 Glycosyltransferase Family 4 DYI95_002975 PF03808 Glycosyl transferase WecB/TagA/CpsF family DYI95_002980 PF05036 Sporulation related domain DYI95_002980 PF01520 N-acetylmuramoyl-L-alanine amidase DYI95_002995 PF00395 S-layer homology domain DYI95_002995 PF00963 Cohesin domain DYI95_003030 PF00665 Integrase core domain DYI95_003060 PF04122 Putative cell wall binding repeat 2 DYI95_003060 PF08486 Stage II sporulation protein DYI95_003065 PF00534 Glycosyl transferases group 1 DYI95_003065 PF13439 Glycosyltransferase Family 4 DYI95_003085 PF03023 Lipid II flippase MurJ DYI95_003095 PF01494 FAD binding domain DYI95_003100 PF00005 ABC transporter DYI95_003105 PF00005 ABC transporter DYI95_003105 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYI95_003115 PF02653 Branched-chain amino acid transport system / permease component DYI95_003125 PF01175 Urocanase Rossmann-like domain DYI95_003125 PF17392 Urocanase C-terminal domain DYI95_003125 PF17391 Urocanase N-terminal domain DYI95_003130 PF01979 Amidohydrolase family DYI95_003135 PF00491 Arginase family DYI95_003140 PF02146 Sir2 family DYI95_003145 PF05163 DinB family DYI95_003150 PF01522 Polysaccharide deacetylase DYI95_003175 PF00437 Type II/IV secretion system protein DYI95_003180 PF06750 Bacterial Peptidase A24 N-terminal domain DYI95_003180 PF01478 Type IV leader peptidase family DYI95_003185 PF00437 Type II/IV secretion system protein DYI95_003190 PF00482 Type II secretion system (T2SS), protein F DYI95_003195 PF07963 Prokaryotic N-terminal methylation motif DYI95_003195 PF00114 Pilin (bacterial filament) DYI95_003235 PF01050 Mannose-6-phosphate isomerase DYI95_003235 PF00483 Nucleotidyl transferase DYI95_003240 PF00483 Nucleotidyl transferase DYI95_003250 PF17676 LD-carboxypeptidase C-terminal domain DYI95_003250 PF02016 LD-carboxypeptidase N-terminal domain DYI95_003255 PF00291 Pyridoxal-phosphate dependent enzyme DYI95_003285 PF00561 alpha/beta hydrolase fold DYI95_003295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_003300 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_003305 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_003305 PF12911 N-terminal TM domain of oligopeptide transport permease C DYI95_003315 PF00005 ABC transporter DYI95_003315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_003320 PF03023 Lipid II flippase MurJ DYI95_003325 PF01618 MotA/TolQ/ExbB proton channel family DYI95_003330 PF00691 OmpA family DYI95_003330 PF13677 Membrane MotB of proton-channel complex MotA/MotB DYI95_003335 PF00072 Response regulator receiver domain DYI95_003355 PF01740 STAS domain DYI95_003380 PF00534 Glycosyl transferases group 1 DYI95_003380 PF13439 Glycosyltransferase Family 4 DYI95_003385 PF00005 ABC transporter DYI95_003385 PF08402 TOBE domain DYI95_003390 PF03649 Uncharacterised protein family (UPF0014) DYI95_003425 PF02397 Bacterial sugar transferase DYI95_003435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DYI95_003440 PF02348 Cytidylyltransferase DYI95_003445 PF08666 SAF domain DYI95_003445 PF03102 NeuB family DYI95_003450 PF02350 UDP-N-acetylglucosamine 2-epimerase DYI95_003455 PF02719 Polysaccharide biosynthesis protein DYI95_003460 PF01501 Glycosyl transferase family 8 DYI95_003460 PF00535 Glycosyl transferase family 2 DYI95_003485 PF13614 AAA domain DYI95_003490 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DYI95_003490 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DYI95_003495 PF01418 Helix-turn-helix domain, rpiR family DYI95_003495 PF01380 SIS domain DYI95_003505 PF03613 PTS system mannose/fructose/sorbose family IID component DYI95_003515 PF03613 PTS system mannose/fructose/sorbose family IID component DYI95_003520 PF13580 SIS domain DYI95_003525 PF03610 PTS system fructose IIA component DYI95_003525 PF03830 PTS system sorbose subfamily IIB component DYI95_003530 PF03830 PTS system sorbose subfamily IIB component DYI95_003535 PF13580 SIS domain DYI95_003540 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal DYI95_003540 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal DYI95_003565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DYI95_003565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DYI95_003565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DYI95_003570 PF16363 GDP-mannose 4,6 dehydratase DYI95_003600 PF00266 Aminotransferase class-V DYI95_003610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_003610 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_003610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_003625 PF01654 Cytochrome bd terminal oxidase subunit I DYI95_003635 PF03816 Cell envelope-related transcriptional attenuator domain DYI95_003640 PF00072 Response regulator receiver domain DYI95_003640 PF00990 Diguanylate cyclase, GGDEF domain DYI95_003660 PF01235 Sodium:alanine symporter family DYI95_003675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_003680 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_003685 PF12911 N-terminal TM domain of oligopeptide transport permease C DYI95_003685 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_003690 PF07722 Peptidase C26 DYI95_003695 PF00248 Aldo/keto reductase family DYI95_003705 PF01546 Peptidase family M20/M25/M40 DYI95_003705 PF07687 Peptidase dimerisation domain DYI95_003715 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DYI95_003730 PF00464 Serine hydroxymethyltransferase DYI95_003740 PF02261 Aspartate decarboxylase DYI95_003750 PF02401 LytB protein DYI95_003755 PF00005 ABC transporter DYI95_003755 PF00571 CBS domain DYI95_003760 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_003780 PF12728 Helix-turn-helix domain DYI95_003790 PF07995 Glucose / Sorbosone dehydrogenase DYI95_003805 PF00072 Response regulator receiver domain DYI95_003805 PF00486 Transcriptional regulatory protein, C terminal DYI95_003810 PF00672 HAMP domain DYI95_003810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_003810 PF00512 His Kinase A (phospho-acceptor) domain DYI95_003815 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_003820 PF01645 Conserved region in glutamate synthase DYI95_003830 PF10576 Iron-sulfur binding domain of endonuclease III DYI95_003830 PF00730 HhH-GPD superfamily base excision DNA repair protein DYI95_003830 PF00633 Helix-hairpin-helix motif DYI95_003845 PF03401 Tripartite tricarboxylate transporter family receptor DYI95_003855 PF01970 Tripartite tricarboxylate transporter TctA family DYI95_003860 PF00459 Inositol monophosphatase family DYI95_003865 PF13344 Haloacid dehalogenase-like hydrolase DYI95_003865 PF00293 NUDIX domain DYI95_003875 PF00571 CBS domain DYI95_003875 PF03471 Transporter associated domain DYI95_003875 PF01595 Cyclin M transmembrane N-terminal domain DYI95_003880 PF02660 Glycerol-3-phosphate acyltransferase DYI95_003895 PF12705 PD-(D/E)XK nuclease superfamily DYI95_003895 PF13361 UvrD-like helicase C-terminal domain DYI95_003900 PF13361 UvrD-like helicase C-terminal domain DYI95_003900 PF12705 PD-(D/E)XK nuclease superfamily DYI95_003900 PF00580 UvrD/REP helicase N-terminal domain DYI95_003925 PF00269 Small, acid-soluble spore proteins, alpha/beta type DYI95_003930 PF00860 Permease family DYI95_003960 PF00196 Bacterial regulatory proteins, luxR family DYI95_003960 PF00072 Response regulator receiver domain DYI95_003975 PF14579 Helix-hairpin-helix motif DYI95_003975 PF07733 Bacterial DNA polymerase III alpha NTPase domain DYI95_003975 PF02811 PHP domain DYI95_003975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DYI95_003985 PF00588 SpoU rRNA Methylase family DYI95_003995 PF00795 Carbon-nitrogen hydrolase DYI95_004010 PF00708 Acylphosphatase DYI95_004015 PF01925 Sulfite exporter TauE/SafE DYI95_004025 PF04284 Protein of unknown function (DUF441) DYI95_004035 PF01106 NifU-like domain DYI95_004065 PF08439 Oligopeptidase F DYI95_004065 PF01432 Peptidase family M3 DYI95_004085 PF13180 PDZ domain DYI95_004090 PF08741 YwhD family DYI95_004100 PF04286 Protein of unknown function (DUF445) DYI95_004105 PF02824 TGS domain DYI95_004105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI95_004105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYI95_004105 PF03129 Anticodon binding domain DYI95_004110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_004125 PF05198 Translation initiation factor IF-3, N-terminal domain DYI95_004125 PF00707 Translation initiation factor IF-3, C-terminal domain DYI95_004130 PF01632 Ribosomal protein L35 DYI95_004135 PF00453 Ribosomal protein L20 DYI95_004140 PF02386 Cation transport protein DYI95_004145 PF02080 TrkA-C domain DYI95_004145 PF02254 TrkA-N domain DYI95_004150 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYI95_004150 PF00588 SpoU rRNA Methylase family DYI95_004160 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DYI95_004160 PF01409 tRNA synthetases class II core domain (F) DYI95_004165 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DYI95_004165 PF01588 Putative tRNA binding domain DYI95_004165 PF03147 Ferredoxin-fold anticodon binding domain DYI95_004165 PF03484 tRNA synthetase B5 domain DYI95_004165 PF03483 B3/4 domain DYI95_004170 PF05164 Cell division protein ZapA DYI95_004175 PF14716 Helix-hairpin-helix domain DYI95_004175 PF02811 PHP domain DYI95_004175 PF14791 DNA polymerase beta thumb DYI95_004180 PF04299 Putative FMN-binding domain DYI95_004185 PF01713 Smr domain DYI95_004185 PF00488 MutS domain V DYI95_004190 PF00905 Penicillin binding protein transpeptidase domain DYI95_004190 PF00912 Transglycosylase DYI95_004195 PF00579 tRNA synthetases class I (W and Y) DYI95_004195 PF01479 S4 domain DYI95_004205 PF00291 Pyridoxal-phosphate dependent enzyme DYI95_004210 PF01709 Transcriptional regulator DYI95_004220 PF02075 Crossover junction endodeoxyribonuclease RuvC DYI95_004225 PF01330 RuvA N terminal domain DYI95_004225 PF07499 RuvA, C-terminal domain DYI95_004230 PF05496 Holliday junction DNA helicase RuvB P-loop domain DYI95_004230 PF17864 RuvB AAA lid domain DYI95_004230 PF05491 RuvB C-terminal winged helix domain DYI95_004240 PF04542 Sigma-70 region 2 DYI95_004250 PF02547 Queuosine biosynthesis protein DYI95_004255 PF01702 Queuine tRNA-ribosyltransferase DYI95_004260 PF02699 Preprotein translocase subunit DYI95_004265 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYI95_004265 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYI95_004270 PF01039 Carboxyl transferase domain DYI95_004280 PF00364 Biotin-requiring enzyme DYI95_004285 PF01812 5-formyltetrahydrofolate cyclo-ligase family DYI95_004295 PF02381 MraZ protein, putative antitoxin-like DYI95_004300 PF01795 MraW methylase family DYI95_004310 PF03717 Penicillin-binding Protein dimerisation domain DYI95_004310 PF03793 PASTA domain DYI95_004310 PF00905 Penicillin binding protein transpeptidase domain DYI95_004315 PF02875 Mur ligase family, glutamate ligase domain DYI95_004315 PF08245 Mur ligase middle domain DYI95_004315 PF01225 Mur ligase family, catalytic domain DYI95_004320 PF01225 Mur ligase family, catalytic domain DYI95_004320 PF02875 Mur ligase family, glutamate ligase domain DYI95_004320 PF08245 Mur ligase middle domain DYI95_004325 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DYI95_004325 PF00953 Glycosyl transferase family 4 DYI95_004330 PF01098 Cell cycle protein DYI95_004335 PF04101 Glycosyltransferase family 28 C-terminal domain DYI95_004335 PF03033 Glycosyltransferase family 28 N-terminal domain DYI95_004340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DYI95_004340 PF01565 FAD binding domain DYI95_004350 PF00091 Tubulin/FtsZ family, GTPase domain DYI95_004350 PF12327 FtsZ family, C-terminal domain DYI95_004355 PF03419 Sporulation factor SpoIIGA DYI95_004360 PF04542 Sigma-70 region 2 DYI95_004360 PF04545 Sigma-70, region 4 DYI95_004370 PF04545 Sigma-70, region 4 DYI95_004370 PF04542 Sigma-70 region 2 DYI95_004370 PF04539 Sigma-70 region 3 DYI95_004375 PF09551 Stage II sporulation protein R (spore_II_R) DYI95_004380 PF05239 PRC-barrel domain DYI95_004390 PF01168 Alanine racemase, N-terminal domain DYI95_004395 PF04472 Cell division protein SepF DYI95_004400 PF02325 YGGT family DYI95_004405 PF05103 DivIVA protein DYI95_004415 PF00133 tRNA synthetases class I (I, L, M and V) DYI95_004415 PF08264 Anticodon-binding domain of tRNA DYI95_004415 PF06827 Zinc finger found in FPG and IleRS DYI95_004420 PF01177 Asp/Glu/Hydantoin racemase DYI95_004425 PF07969 Amidohydrolase family DYI95_004430 PF01950 Fructose-1,6-bisphosphatase DYI95_004440 PF01258 Prokaryotic dksA/traR C4-type zinc finger DYI95_004445 PF01252 Signal peptidase (SPase) II DYI95_004450 PF01479 S4 domain DYI95_004450 PF00849 RNA pseudouridylate synthase DYI95_004455 PF00156 Phosphoribosyl transferase domain DYI95_004460 PF02595 Glycerate kinase family DYI95_004465 PF05670 NFACT protein RNA binding domain DYI95_004470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYI95_004470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYI95_004470 PF00378 Enoyl-CoA hydratase/isomerase DYI95_004475 PF00108 Thiolase, N-terminal domain DYI95_004475 PF02803 Thiolase, C-terminal domain DYI95_004480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_004480 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_004480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_004485 PF00753 Metallo-beta-lactamase superfamily DYI95_004490 PF03060 Nitronate monooxygenase DYI95_004495 PF13607 Succinyl-CoA ligase like flavodoxin domain DYI95_004495 PF13380 CoA binding domain DYI95_004495 PF00583 Acetyltransferase (GNAT) family DYI95_004515 PF02558 Ketopantoate reductase PanE/ApbA DYI95_004515 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain DYI95_004530 PF00689 Cation transporting ATPase, C-terminus DYI95_004530 PF00690 Cation transporter/ATPase, N-terminus DYI95_004535 PF01678 Diaminopimelate epimerase DYI95_004540 PF00155 Aminotransferase class I and II DYI95_004550 PF03755 YicC-like family, N-terminal region DYI95_004550 PF08340 Domain of unknown function (DUF1732) DYI95_004555 PF04025 Domain of unknown function (DUF370) DYI95_004560 PF00625 Guanylate kinase DYI95_004565 PF01192 RNA polymerase Rpb6 DYI95_004580 PF00551 Formyl transferase DYI95_004580 PF02911 Formyl transferase, C-terminal domain DYI95_004585 PF04298 Putative neutral zinc metallopeptidase DYI95_004590 PF01029 NusB family DYI95_004590 PF01189 16S rRNA methyltransferase RsmB/F DYI95_004595 PF04055 Radical SAM superfamily DYI95_004605 PF03793 PASTA domain DYI95_004605 PF00069 Protein kinase domain DYI95_004610 PF03193 RsgA GTPase DYI95_004610 PF16745 RsgA N-terminal domain DYI95_004615 PF00834 Ribulose-phosphate 3 epimerase family DYI95_004620 PF01430 Hsp33 protein DYI95_004625 PF00830 Ribosomal L28 family DYI95_004635 PF00270 DEAD/DEAH box helicase DYI95_004635 PF00271 Helicase conserved C-terminal domain DYI95_004635 PF17191 RecG wedge domain DYI95_004645 PF03418 Germination protease DYI95_004650 PF07690 Major Facilitator Superfamily DYI95_004665 PF01467 Cytidylyltransferase-like DYI95_004675 PF07670 Nucleoside recognition DYI95_004690 PF01783 Ribosomal L32p protein family DYI95_004700 PF02504 Fatty acid synthesis protein DYI95_004705 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DYI95_004705 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DYI95_004710 PF00698 Acyl transferase domain DYI95_004720 PF00550 Phosphopantetheine attachment site DYI95_004725 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI95_004725 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI95_004730 PF14622 Ribonuclease-III-like DYI95_004730 PF00035 Double-stranded RNA binding motif DYI95_004735 PF04232 Stage V sporulation protein S (SpoVS) DYI95_004740 PF02463 RecF/RecN/SMC N terminal domain DYI95_004740 PF06470 SMC proteins Flexible Hinge Domain DYI95_004745 PF02881 SRP54-type protein, helical bundle domain DYI95_004745 PF00448 SRP54-type protein, GTPase domain DYI95_004750 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DYI95_004755 PF00448 SRP54-type protein, GTPase domain DYI95_004755 PF02881 SRP54-type protein, helical bundle domain DYI95_004755 PF02978 Signal peptide binding domain DYI95_004760 PF00886 Ribosomal protein S16 DYI95_004770 PF01782 RimM N-terminal domain DYI95_004770 PF05239 PRC-barrel domain DYI95_004775 PF01746 tRNA (Guanine-1)-methyltransferase DYI95_004780 PF01245 Ribosomal protein L19 DYI95_004785 PF10502 Signal peptidase, peptidase S26 DYI95_004790 PF01926 50S ribosome-binding GTPase DYI95_004795 PF01351 Ribonuclease HII DYI95_004800 PF02021 Uncharacterised protein family UPF0102 DYI95_004805 PF13335 Magnesium chelatase, subunit ChlI C-terminal DYI95_004805 PF01078 Magnesium chelatase, subunit ChlI DYI95_004810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_004815 PF02481 DNA recombination-mediator protein A DYI95_004815 PF17782 DprA winged helix domain DYI95_004820 PF01751 Toprim domain DYI95_004820 PF01396 Topoisomerase DNA binding C4 zinc finger DYI95_004820 PF01131 DNA topoisomerase DYI95_004825 PF01134 Glucose inhibited division protein A DYI95_004830 PF00589 Phage integrase family DYI95_004830 PF02899 Phage integrase, N-terminal SAM-like domain DYI95_004835 PF00227 Proteasome subunit DYI95_004840 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_004840 PF10431 C-terminal, D2-small domain, of ClpB protein DYI95_004840 PF07724 AAA domain (Cdc48 subfamily) DYI95_004845 PF00460 Flagella basal body rod protein DYI95_004850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYI95_004850 PF00460 Flagella basal body rod protein DYI95_004855 PF02049 Flagellar hook-basal body complex protein FliE DYI95_004860 PF01514 Secretory protein of YscJ/FliF family DYI95_004860 PF08345 Flagellar M-ring protein C-terminal DYI95_004865 PF14841 FliG middle domain DYI95_004865 PF01706 FliG C-terminal domain DYI95_004865 PF14842 FliG N-terminal domain DYI95_004875 PF18269 T3SS EscN ATPase C-terminal domain DYI95_004875 PF02874 ATP synthase alpha/beta family, beta-barrel domain DYI95_004875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DYI95_004895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DYI95_004895 PF07559 Flagellar basal body protein FlaE DYI95_004895 PF00460 Flagella basal body rod protein DYI95_004900 PF06289 Flagellar and Swarming motility proteins DYI95_004910 PF02154 Flagellar motor switch protein FliM DYI95_004910 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYI95_004915 PF04509 CheC-like family DYI95_004915 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DYI95_004930 PF00813 FliP family DYI95_004935 PF01313 Bacterial export proteins, family 3 DYI95_004940 PF01311 Bacterial export proteins, family 1 DYI95_004945 PF01312 FlhB HrpN YscU SpaS Family DYI95_004950 PF00771 FHIPEP family DYI95_004955 PF00448 SRP54-type protein, GTPase domain DYI95_004960 PF10609 NUBPL iron-transfer P-loop NTPase DYI95_004970 PF04545 Sigma-70, region 4 DYI95_004970 PF04542 Sigma-70 region 2 DYI95_004970 PF04539 Sigma-70 region 3 DYI95_004985 PF00318 Ribosomal protein S2 DYI95_004990 PF00889 Elongation factor TS DYI95_004995 PF00696 Amino acid kinase family DYI95_005000 PF01765 Ribosome recycling factor DYI95_005010 PF01255 Putative undecaprenyl diphosphate synthase DYI95_005020 PF13288 DXP reductoisomerase C-terminal domain DYI95_005020 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DYI95_005020 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DYI95_005025 PF13180 PDZ domain DYI95_005025 PF02163 Peptidase family M50 DYI95_005030 PF04551 GcpE protein DYI95_005035 PF04073 Aminoacyl-tRNA editing domain DYI95_005035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DYI95_005035 PF03129 Anticodon binding domain DYI95_005045 PF17384 RimP C-terminal SH3 domain DYI95_005045 PF02576 RimP N-terminal domain DYI95_005050 PF00575 S1 RNA binding domain DYI95_005050 PF08529 NusA N-terminal domain DYI95_005050 PF13184 NusA-like KH domain DYI95_005055 PF04296 Protein of unknown function (DUF448) DYI95_005065 PF11987 Translation-initiation factor 2 DYI95_005065 PF00009 Elongation factor Tu GTP binding domain DYI95_005065 PF04760 Translation initiation factor IF-2, N-terminal region DYI95_005075 PF02033 Ribosome-binding factor A DYI95_005080 PF01368 DHH family DYI95_005080 PF02272 DHHA1 domain DYI95_005085 PF01509 TruB family pseudouridylate synthase (N terminal domain) DYI95_005085 PF16198 tRNA pseudouridylate synthase B C-terminal domain DYI95_005090 PF01687 Riboflavin kinase DYI95_005090 PF06574 FAD synthetase DYI95_005095 PF00312 Ribosomal protein S15 DYI95_005100 PF00575 S1 RNA binding domain DYI95_005100 PF01138 3' exoribonuclease family, domain 1 DYI95_005100 PF03725 3' exoribonuclease family, domain 2 DYI95_005100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DYI95_005100 PF00013 KH domain DYI95_005105 PF00675 Insulinase (Peptidase family M16) DYI95_005105 PF05193 Peptidase M16 inactive domain DYI95_005110 PF00692 dUTPase DYI95_005125 PF05173 Dihydrodipicolinate reductase, C-terminus DYI95_005125 PF01113 Dihydrodipicolinate reductase, N-terminus DYI95_005135 PF02441 Flavoprotein DYI95_005140 PF01118 Semialdehyde dehydrogenase, NAD binding domain DYI95_005140 PF02774 Semialdehyde dehydrogenase, dimerisation domain DYI95_005145 PF00696 Amino acid kinase family DYI95_005145 PF13840 ACT domain DYI95_005150 PF00701 Dihydrodipicolinate synthetase family DYI95_005155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DYI95_005155 PF00753 Metallo-beta-lactamase superfamily DYI95_005155 PF17770 Ribonuclease J C-terminal domain DYI95_005160 PF00574 Clp protease DYI95_005170 PF02673 Bacitracin resistance protein BacA DYI95_005175 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DYI95_005175 PF09397 Ftsk gamma domain DYI95_005175 PF01580 FtsK/SpoIIIE family DYI95_005175 PF17854 FtsK alpha domain DYI95_005180 PF00704 Glycosyl hydrolases family 18 DYI95_005190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI95_005190 PF01842 ACT domain DYI95_005190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI95_005195 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) DYI95_005210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_005210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_005210 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_005215 PF00682 HMGL-like DYI95_005220 PF00768 D-alanyl-D-alanine carboxypeptidase DYI95_005220 PF07943 Penicillin-binding protein 5, C-terminal domain DYI95_005225 PF01336 OB-fold nucleic acid binding domain DYI95_005225 PF00152 tRNA synthetases class II (D, K and N) DYI95_005235 PF07943 Penicillin-binding protein 5, C-terminal domain DYI95_005235 PF00768 D-alanyl-D-alanine carboxypeptidase DYI95_005240 PF01522 Polysaccharide deacetylase DYI95_005250 PF00271 Helicase conserved C-terminal domain DYI95_005250 PF09369 Domain of unknown function (DUF1998) DYI95_005250 PF00270 DEAD/DEAH box helicase DYI95_005260 PF01205 Uncharacterized protein family UPF0029 DYI95_005260 PF09186 Domain of unknown function (DUF1949) DYI95_005270 PF17862 AAA+ lid domain DYI95_005270 PF01434 Peptidase family M41 DYI95_005270 PF06480 FtsH Extracellular DYI95_005270 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_005275 PF02464 Competence-damaged protein DYI95_005275 PF00994 Probable molybdopterin binding domain DYI95_005275 PF18146 Damage-inducible protein CinA KH domain DYI95_005290 PF00154 recA bacterial DNA recombination protein DYI95_005295 PF02631 RecX family DYI95_005300 PF01966 HD domain DYI95_005300 PF00013 KH domain DYI95_005300 PF12072 Domain of unknown function (DUF3552) DYI95_005305 PF13277 YmdB-like protein DYI95_005310 PF01244 Membrane dipeptidase (Peptidase family M19) DYI95_005315 PF00883 Cytosol aminopeptidase family, catalytic domain DYI95_005315 PF02789 Cytosol aminopeptidase family, N-terminal domain DYI95_005320 PF02811 PHP domain DYI95_005335 PF00919 Uncharacterized protein family UPF0004 DYI95_005335 PF04055 Radical SAM superfamily DYI95_005335 PF01938 TRAM domain DYI95_005350 PF01119 DNA mismatch repair protein, C-terminal domain DYI95_005350 PF08676 MutL C terminal dimerisation domain DYI95_005370 PF17866 AAA lid domain DYI95_005370 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_005375 PF13167 GTP-binding GTPase N-terminal DYI95_005375 PF16360 GTP-binding GTPase Middle Region DYI95_005375 PF01926 50S ribosome-binding GTPase DYI95_005385 PF00717 Peptidase S24-like DYI95_005385 PF01726 LexA DNA binding domain DYI95_005395 PF00378 Enoyl-CoA hydratase/isomerase DYI95_005400 PF00107 Zinc-binding dehydrogenase DYI95_005400 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_005405 PF07690 Major Facilitator Superfamily DYI95_005415 PF00171 Aldehyde dehydrogenase family DYI95_005420 PF01522 Polysaccharide deacetylase DYI95_005430 PF01975 Survival protein SurE DYI95_005435 PF13307 Helicase C-terminal domain DYI95_005440 PF00300 Histidine phosphatase superfamily (branch 1) DYI95_005445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DYI95_005445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DYI95_005450 PF01979 Amidohydrolase family DYI95_005455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DYI95_005455 PF05221 S-adenosyl-L-homocysteine hydrolase DYI95_005460 PF01048 Phosphorylase superfamily DYI95_005465 PF00334 Nucleoside diphosphate kinase DYI95_005470 PF02675 S-adenosylmethionine decarboxylase DYI95_005480 PF00534 Glycosyl transferases group 1 DYI95_005480 PF08323 Starch synthase catalytic domain DYI95_005490 PF00899 ThiF family DYI95_005490 PF00581 Rhodanese-like domain DYI95_005505 PF09547 Stage IV sporulation protein A (spore_IV_A) DYI95_005515 PF02660 Glycerol-3-phosphate acyltransferase DYI95_005520 PF01926 50S ribosome-binding GTPase DYI95_005520 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DYI95_005535 PF00575 S1 RNA binding domain DYI95_005540 PF13193 AMP-binding enzyme C-terminal domain DYI95_005540 PF01553 Acyltransferase DYI95_005540 PF00501 AMP-binding enzyme DYI95_005545 PF02224 Cytidylate kinase DYI95_005575 PF01012 Electron transfer flavoprotein domain DYI95_005575 PF00766 Electron transfer flavoprotein FAD-binding domain DYI95_005580 PF01012 Electron transfer flavoprotein domain DYI95_005590 PF00849 RNA pseudouridylate synthase DYI95_005590 PF01479 S4 domain DYI95_005600 PF07670 Nucleoside recognition DYI95_005605 PF07670 Nucleoside recognition DYI95_005610 PF00271 Helicase conserved C-terminal domain DYI95_005610 PF00176 SNF2 family N-terminal domain DYI95_005620 PF04679 ATP dependent DNA ligase C terminal region DYI95_005620 PF13298 DNA polymerase Ligase (LigD) DYI95_005620 PF01068 ATP dependent DNA ligase domain DYI95_005625 PF02735 Ku70/Ku80 beta-barrel domain DYI95_005630 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DYI95_005640 PF04079 Segregation and condensation complex subunit ScpB DYI95_005645 PF02616 Segregation and condensation protein ScpA DYI95_005650 PF02163 Peptidase family M50 DYI95_005660 PF03323 Bacillus/Clostridium GerA spore germination protein DYI95_005665 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DYI95_005670 PF07451 Stage V sporulation protein AD (SpoVAD) DYI95_005675 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DYI95_005685 PF04542 Sigma-70 region 2 DYI95_005685 PF04545 Sigma-70, region 4 DYI95_005685 PF04539 Sigma-70 region 3 DYI95_005690 PF13581 Histidine kinase-like ATPase domain DYI95_005695 PF01740 STAS domain DYI95_005700 PF07943 Penicillin-binding protein 5, C-terminal domain DYI95_005700 PF00768 D-alanyl-D-alanine carboxypeptidase DYI95_005705 PF03841 L-seryl-tRNA selenium transferase DYI95_005705 PF12390 Selenocysteine synthase N terminal DYI95_005710 PF00589 Phage integrase family DYI95_005710 PF02899 Phage integrase, N-terminal SAM-like domain DYI95_005715 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DYI95_005715 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DYI95_005725 PF00293 NUDIX domain DYI95_005740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYI95_005740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYI95_005745 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYI95_005745 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYI95_005755 PF00535 Glycosyl transferase family 2 DYI95_005770 PF00072 Response regulator receiver domain DYI95_005770 PF08769 Sporulation initiation factor Spo0A C terminal DYI95_005780 PF02463 RecF/RecN/SMC N terminal domain DYI95_005785 PF01316 Arginine repressor, DNA binding domain DYI95_005785 PF02863 Arginine repressor, C-terminal domain DYI95_005790 PF01513 ATP-NAD kinase DYI95_005795 PF07687 Peptidase dimerisation domain DYI95_005795 PF01546 Peptidase family M20/M25/M40 DYI95_005800 PF00701 Dihydrodipicolinate synthetase family DYI95_005805 PF01479 S4 domain DYI95_005805 PF01728 FtsJ-like methyltransferase DYI95_005810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DYI95_005810 PF02780 Transketolase, C-terminal domain DYI95_005810 PF02779 Transketolase, pyrimidine binding domain DYI95_005820 PF00348 Polyprenyl synthetase DYI95_005825 PF02609 Exonuclease VII small subunit DYI95_005830 PF02601 Exonuclease VII, large subunit DYI95_005830 PF13742 OB-fold nucleic acid binding domain DYI95_005835 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DYI95_005835 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DYI95_005840 PF01029 NusB family DYI95_005855 PF03780 Asp23 family, cell envelope-related function DYI95_005860 PF12685 SpoIIIAH-like protein DYI95_005875 PF09546 Stage III sporulation protein AE (spore_III_AE) DYI95_005880 PF06686 Stage III sporulation protein AC/AD protein family DYI95_005885 PF06686 Stage III sporulation protein AC/AD protein family DYI95_005905 PF01132 Elongation factor P (EF-P) OB domain DYI95_005905 PF09285 Elongation factor P, C-terminal DYI95_005905 PF08207 Elongation factor P (EF-P) KOW-like domain DYI95_005910 PF00557 Metallopeptidase family M24 DYI95_005910 PF01321 Creatinase/Prolidase N-terminal domain DYI95_005915 PF00156 Phosphoribosyl transferase domain DYI95_005920 PF02347 Glycine cleavage system P-protein DYI95_005925 PF02347 Glycine cleavage system P-protein DYI95_005930 PF01597 Glycine cleavage H-protein DYI95_005935 PF01571 Aminomethyltransferase folate-binding domain DYI95_005935 PF08669 Glycine cleavage T-protein C-terminal barrel domain DYI95_005940 PF00293 NUDIX domain DYI95_005940 PF13344 Haloacid dehalogenase-like hydrolase DYI95_005950 PF00534 Glycosyl transferases group 1 DYI95_005950 PF13439 Glycosyltransferase Family 4 DYI95_005985 PF00437 Type II/IV secretion system protein DYI95_006015 PF00437 Type II/IV secretion system protein DYI95_006020 PF00072 Response regulator receiver domain DYI95_006020 PF01339 CheB methylesterase DYI95_006045 PF00072 Response regulator receiver domain DYI95_006045 PF00196 Bacterial regulatory proteins, luxR family DYI95_006050 PF07730 Histidine kinase DYI95_006050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_006050 PF05384 Sensor protein DegS DYI95_006060 PF04542 Sigma-70 region 2 DYI95_006060 PF04545 Sigma-70, region 4 DYI95_006065 PF02618 YceG-like family DYI95_006070 PF03652 Holliday junction resolvase DYI95_006085 PF06135 IreB regulatory phosphoprotein DYI95_006090 PF02272 DHHA1 domain DYI95_006090 PF01411 tRNA synthetases class II (A) DYI95_006090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DYI95_006100 PF01594 AI-2E family transporter DYI95_006120 PF00266 Aminotransferase class-V DYI95_006125 PF02082 Transcriptional regulator DYI95_006130 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DYI95_006130 PF00591 Glycosyl transferase family, a/b domain DYI95_006130 PF02885 Glycosyl transferase family, helical bundle domain DYI95_006135 PF01791 DeoC/LacD family aldolase DYI95_006140 PF00265 Thymidine kinase DYI95_006145 PF12002 MgsA AAA+ ATPase C terminal DYI95_006145 PF16193 AAA C-terminal domain DYI95_006145 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_006150 PF01212 Beta-eliminating lyase DYI95_006155 PF00085 Thioredoxin DYI95_006165 PF01336 OB-fold nucleic acid binding domain DYI95_006165 PF00152 tRNA synthetases class II (D, K and N) DYI95_006165 PF02938 GAD domain DYI95_006170 PF13393 Histidyl-tRNA synthetase DYI95_006170 PF03129 Anticodon binding domain DYI95_006175 PF02580 D-Tyr-tRNA(Tyr) deacylase DYI95_006180 PF02824 TGS domain DYI95_006180 PF04607 Region found in RelA / SpoT proteins DYI95_006180 PF13291 ACT domain DYI95_006185 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DYI95_006185 PF17768 RecJ OB domain DYI95_006185 PF02272 DHHA1 domain DYI95_006185 PF01368 DHH family DYI95_006190 PF17863 AAA lid domain DYI95_006190 PF13519 von Willebrand factor type A domain DYI95_006195 PF13519 von Willebrand factor type A domain DYI95_006195 PF17863 AAA lid domain DYI95_006195 PF01078 Magnesium chelatase, subunit ChlI DYI95_006200 PF07549 SecD/SecF GG Motif DYI95_006200 PF02355 Protein export membrane protein DYI95_006205 PF02355 Protein export membrane protein DYI95_006205 PF07549 SecD/SecF GG Motif DYI95_006220 PF09105 Elongation factor SelB, winged helix DYI95_006220 PF09107 Elongation factor SelB, winged helix DYI95_006220 PF03144 Elongation factor Tu domain 2 DYI95_006220 PF09106 Elongation factor SelB, winged helix DYI95_006220 PF00009 Elongation factor Tu GTP binding domain DYI95_006230 PF00293 NUDIX domain DYI95_006245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_006245 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_006245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_006255 PF01642 Methylmalonyl-CoA mutase DYI95_006255 PF02310 B12 binding domain DYI95_006260 PF01642 Methylmalonyl-CoA mutase DYI95_006260 PF02310 B12 binding domain DYI95_006265 PF00490 Delta-aminolevulinic acid dehydratase DYI95_006270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DYI95_006270 PF14824 Sirohaem biosynthesis protein central DYI95_006270 PF10414 Sirohaem synthase dimerisation region DYI95_006275 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DYI95_006275 PF03900 Porphobilinogen deaminase, C-terminal domain DYI95_006285 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DYI95_006285 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DYI95_006285 PF01488 Shikimate / quinate 5-dehydrogenase DYI95_006290 PF01209 ubiE/COQ5 methyltransferase family DYI95_006295 PF00549 CoA-ligase DYI95_006295 PF02629 CoA binding domain DYI95_006300 PF00549 CoA-ligase DYI95_006300 PF08442 ATP-grasp domain DYI95_006305 PF00390 Malic enzyme, N-terminal domain DYI95_006305 PF03949 Malic enzyme, NAD binding domain DYI95_006310 PF00056 lactate/malate dehydrogenase, NAD binding domain DYI95_006310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DYI95_006320 PF01578 Cytochrome C assembly protein DYI95_006325 PF00005 ABC transporter DYI95_006335 PF03100 CcmE DYI95_006345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DYI95_006345 PF15714 Stage V sporulation protein T C-terminal, transcription factor DYI95_006350 PF06135 IreB regulatory phosphoprotein DYI95_006360 PF00266 Aminotransferase class-V DYI95_006365 PF02568 Thiamine biosynthesis protein (ThiI) DYI95_006365 PF02926 THUMP domain DYI95_006375 PF08331 Domain of unknown function (DUF1730) DYI95_006385 PF00768 D-alanyl-D-alanine carboxypeptidase DYI95_006385 PF07943 Penicillin-binding protein 5, C-terminal domain DYI95_006400 PF01842 ACT domain DYI95_006400 PF00742 Homoserine dehydrogenase DYI95_006400 PF03447 Homoserine dehydrogenase, NAD binding domain DYI95_006405 PF00561 alpha/beta hydrolase fold DYI95_006420 PF08279 HTH domain DYI95_006420 PF03099 Biotin/lipoate A/B protein ligase family DYI95_006420 PF02237 Biotin protein ligase C terminal domain DYI95_006425 PF03749 Sugar fermentation stimulation protein RE domain DYI95_006425 PF17746 SfsA N-terminal OB domain DYI95_006430 PF01380 SIS domain DYI95_006430 PF01418 Helix-turn-helix domain, rpiR family DYI95_006435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DYI95_006435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DYI95_006440 PF00005 ABC transporter DYI95_006440 PF16326 ABC transporter C-terminal domain DYI95_006440 PF12848 ABC transporter DYI95_006445 PF00501 AMP-binding enzyme DYI95_006445 PF13193 AMP-binding enzyme C-terminal domain DYI95_006450 PF01734 Patatin-like phospholipase DYI95_006455 PF03323 Bacillus/Clostridium GerA spore germination protein DYI95_006475 PF00285 Citrate synthase, C-terminal domain DYI95_006480 PF00005 ABC transporter DYI95_006485 PF01032 FecCD transport family DYI95_006490 PF01497 Periplasmic binding protein DYI95_006495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DYI95_006510 PF00873 AcrB/AcrD/AcrF family DYI95_006520 PF00440 Bacterial regulatory proteins, tetR family DYI95_006525 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DYI95_006530 PF02245 Methylpurine-DNA glycosylase (MPG) DYI95_006535 PF02608 ABC transporter substrate-binding protein PnrA-like DYI95_006555 PF00005 ABC transporter DYI95_006555 PF00664 ABC transporter transmembrane region DYI95_006560 PF00005 ABC transporter DYI95_006560 PF00664 ABC transporter transmembrane region DYI95_006580 PF00149 Calcineurin-like phosphoesterase DYI95_006590 PF00005 ABC transporter DYI95_006595 PF09819 ABC-type cobalt transport system, permease component DYI95_006600 PF00106 short chain dehydrogenase DYI95_006605 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_006605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_006605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_006620 PF02626 Carboxyltransferase domain, subdomain A and B DYI95_006625 PF02682 Carboxyltransferase domain, subdomain C and D DYI95_006630 PF03746 LamB/YcsF family DYI95_006640 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_006640 PF12911 N-terminal TM domain of oligopeptide transport permease C DYI95_006645 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_006650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_006655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_006655 PF00005 ABC transporter DYI95_006660 PF00005 ABC transporter DYI95_006660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_006670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI95_006670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_006670 PF00205 Thiamine pyrophosphate enzyme, central domain DYI95_006675 PF13193 AMP-binding enzyme C-terminal domain DYI95_006675 PF00501 AMP-binding enzyme DYI95_006690 PF01520 N-acetylmuramoyl-L-alanine amidase DYI95_006690 PF08239 Bacterial SH3 domain DYI95_006710 PF01979 Amidohydrolase family DYI95_006710 PF13382 Adenine deaminase C-terminal domain DYI95_006715 PF08546 Ketopantoate reductase PanE/ApbA C terminal DYI95_006715 PF02558 Ketopantoate reductase PanE/ApbA DYI95_006720 PF01557 Fumarylacetoacetate (FAA) hydrolase family DYI95_006730 PF04143 Sulphur transport DYI95_006740 PF00989 PAS fold DYI95_006740 PF00512 His Kinase A (phospho-acceptor) domain DYI95_006740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_006740 PF16736 Single Cache-like DYI95_006745 PF00486 Transcriptional regulatory protein, C terminal DYI95_006745 PF00072 Response regulator receiver domain DYI95_006750 PF00174 Oxidoreductase molybdopterin binding domain DYI95_006765 PF03109 ABC1 family DYI95_006775 PF07687 Peptidase dimerisation domain DYI95_006775 PF01546 Peptidase family M20/M25/M40 DYI95_006780 PF13439 Glycosyltransferase Family 4 DYI95_006780 PF00534 Glycosyl transferases group 1 DYI95_006785 PF00575 S1 RNA binding domain DYI95_006795 PF02142 MGS-like domain DYI95_006800 PF00269 Small, acid-soluble spore proteins, alpha/beta type DYI95_006805 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYI95_006805 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYI95_006805 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYI95_006810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_006825 PF00072 Response regulator receiver domain DYI95_006825 PF00196 Bacterial regulatory proteins, luxR family DYI95_006830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_006830 PF07730 Histidine kinase DYI95_006840 PF03591 AzlC protein DYI95_006865 PF02585 GlcNAc-PI de-N-acetylase DYI95_006870 PF00902 Sec-independent protein translocase protein (TatC) DYI95_006875 PF02416 mttA/Hcf106 family DYI95_006885 PF05193 Peptidase M16 inactive domain DYI95_006890 PF05193 Peptidase M16 inactive domain DYI95_006895 PF11588 Protein of unknown function (DUF3243) DYI95_006900 PF00356 Bacterial regulatory proteins, lacI family DYI95_006910 PF00072 Response regulator receiver domain DYI95_006910 PF00486 Transcriptional regulatory protein, C terminal DYI95_006915 PF01039 Carboxyl transferase domain DYI95_006920 PF00364 Biotin-requiring enzyme DYI95_006925 PF01479 S4 domain DYI95_006925 PF00163 Ribosomal protein S4/S9 N-terminal domain DYI95_006930 PF01053 Cys/Met metabolism PLP-dependent enzyme DYI95_006935 PF01227 GTP cyclohydrolase I DYI95_006955 PF01274 Malate synthase DYI95_006965 PF02913 FAD linked oxidases, C-terminal domain DYI95_006965 PF01565 FAD binding domain DYI95_006970 PF02754 Cysteine-rich domain DYI95_006970 PF13183 4Fe-4S dicluster domain DYI95_006980 PF01565 FAD binding domain DYI95_006980 PF02913 FAD linked oxidases, C-terminal domain DYI95_006985 PF03009 Glycerophosphoryl diester phosphodiesterase family DYI95_006990 PF01070 FMN-dependent dehydrogenase DYI95_006995 PF00106 short chain dehydrogenase DYI95_007000 PF03450 CO dehydrogenase flavoprotein C-terminal domain DYI95_007000 PF00941 FAD binding domain in molybdopterin dehydrogenase DYI95_007005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DYI95_007005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DYI95_007010 PF01799 [2Fe-2S] binding domain DYI95_007010 PF00111 2Fe-2S iron-sulfur cluster binding domain DYI95_007015 PF00378 Enoyl-CoA hydratase/isomerase DYI95_007040 PF01497 Periplasmic binding protein DYI95_007050 PF06463 Molybdenum Cofactor Synthesis C DYI95_007050 PF04055 Radical SAM superfamily DYI95_007055 PF01522 Polysaccharide deacetylase DYI95_007055 PF03422 Carbohydrate binding module (family 6) DYI95_007055 PF00457 Glycosyl hydrolases family 11 DYI95_007060 PF08359 YsiA-like protein, C-terminal region DYI95_007060 PF00440 Bacterial regulatory proteins, tetR family DYI95_007080 PF03323 Bacillus/Clostridium GerA spore germination protein DYI95_007085 PF00885 6,7-dimethyl-8-ribityllumazine synthase DYI95_007090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DYI95_007090 PF00925 GTP cyclohydrolase II DYI95_007100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DYI95_007100 PF02844 Phosphoribosylglycinamide synthetase, N domain DYI95_007100 PF02843 Phosphoribosylglycinamide synthetase, C domain DYI95_007105 PF02142 MGS-like domain DYI95_007105 PF01808 AICARFT/IMPCHase bienzyme DYI95_007110 PF00551 Formyl transferase DYI95_007115 PF02769 AIR synthase related protein, C-terminal domain DYI95_007115 PF00586 AIR synthase related protein, N-terminal domain DYI95_007120 PF00156 Phosphoribosyl transferase domain DYI95_007140 PF01259 SAICAR synthetase DYI95_007145 PF10397 Adenylosuccinate lyase C-terminus DYI95_007145 PF00206 Lyase DYI95_007150 PF00731 AIR carboxylase DYI95_007165 PF00682 HMGL-like DYI95_007165 PF08502 LeuA allosteric (dimerisation) domain DYI95_007170 PF01521 Iron-sulphur cluster biosynthesis DYI95_007175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_007180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYI95_007180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYI95_007180 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYI95_007185 PF14759 Reductase C-terminal DYI95_007185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_007190 PF00005 ABC transporter DYI95_007195 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_007200 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_007205 PF00497 Bacterial extracellular solute-binding proteins, family 3 DYI95_007210 PF14748 Pyrroline-5-carboxylate reductase dimerisation DYI95_007210 PF03807 NADP oxidoreductase coenzyme F420-dependent DYI95_007215 PF01329 Pterin 4 alpha carbinolamine dehydratase DYI95_007225 PF10672 S-adenosylmethionine-dependent methyltransferase DYI95_007225 PF17785 PUA-like domain DYI95_007230 PF01370 NAD dependent epimerase/dehydratase family DYI95_007230 PF08338 Domain of unknown function (DUF1731) DYI95_007235 PF07690 Major Facilitator Superfamily DYI95_007265 PF00290 Tryptophan synthase alpha chain DYI95_007270 PF00291 Pyridoxal-phosphate dependent enzyme DYI95_007275 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DYI95_007280 PF00218 Indole-3-glycerol phosphate synthase DYI95_007285 PF02885 Glycosyl transferase family, helical bundle domain DYI95_007285 PF00591 Glycosyl transferase family, a/b domain DYI95_007290 PF00117 Glutamine amidotransferase class-I DYI95_007295 PF00425 chorismate binding enzyme DYI95_007295 PF04715 Anthranilate synthase component I, N terminal region DYI95_007300 PF00595 PDZ domain DYI95_007305 PF00384 Molybdopterin oxidoreductase DYI95_007305 PF01568 Molydopterin dinucleotide binding domain DYI95_007305 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DYI95_007310 PF03453 MoeA N-terminal region (domain I and II) DYI95_007310 PF00994 Probable molybdopterin binding domain DYI95_007310 PF03454 MoeA C-terminal region (domain IV) DYI95_007315 PF02634 FdhD/NarQ family DYI95_007320 PF12804 MobA-like NTP transferase domain DYI95_007330 PF14535 AMP-binding enzyme C-terminal domain DYI95_007330 PF00501 AMP-binding enzyme DYI95_007340 PF08659 KR domain DYI95_007340 PF00550 Phosphopantetheine attachment site DYI95_007340 PF16197 Ketoacyl-synthetase C-terminal extension DYI95_007340 PF09277 Erythronolide synthase, docking DYI95_007340 PF08990 Erythronolide synthase docking DYI95_007340 PF14765 Polyketide synthase dehydratase DYI95_007340 PF02801 Beta-ketoacyl synthase, C-terminal domain DYI95_007340 PF00698 Acyl transferase domain DYI95_007340 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_007340 PF00109 Beta-ketoacyl synthase, N-terminal domain DYI95_007345 PF01614 Bacterial transcriptional regulator DYI95_007345 PF09339 IclR helix-turn-helix domain DYI95_007350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_007355 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_007360 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_007360 PF12911 N-terminal TM domain of oligopeptide transport permease C DYI95_007365 PF02417 Chromate transporter DYI95_007375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_007375 PF00005 ABC transporter DYI95_007380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_007380 PF00005 ABC transporter DYI95_007385 PF00696 Amino acid kinase family DYI95_007400 PF00860 Permease family DYI95_007405 PF00549 CoA-ligase DYI95_007405 PF02629 CoA binding domain DYI95_007410 PF06545 Protein of unknown function (DUF1116) DYI95_007415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DYI95_007415 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DYI95_007420 PF01799 [2Fe-2S] binding domain DYI95_007420 PF00111 2Fe-2S iron-sulfur cluster binding domain DYI95_007425 PF00941 FAD binding domain in molybdopterin dehydrogenase DYI95_007425 PF03450 CO dehydrogenase flavoprotein C-terminal domain DYI95_007430 PF13556 PucR C-terminal helix-turn-helix domain DYI95_007430 PF17853 GGDEF-like domain DYI95_007430 PF07905 Purine catabolism regulatory protein-like family DYI95_007435 PF00378 Enoyl-CoA hydratase/isomerase DYI95_007440 PF00501 AMP-binding enzyme DYI95_007440 PF13193 AMP-binding enzyme C-terminal domain DYI95_007440 PF16177 Acetyl-coenzyme A synthetase N-terminus DYI95_007445 PF07690 Major Facilitator Superfamily DYI95_007450 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DYI95_007450 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DYI95_007450 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DYI95_007455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_007465 PF00171 Aldehyde dehydrogenase family DYI95_007470 PF08000 Bacterial PH domain DYI95_007485 PF01883 Iron-sulfur cluster assembly protein DYI95_007515 PF00535 Glycosyl transferase family 2 DYI95_007520 PF10609 NUBPL iron-transfer P-loop NTPase DYI95_007525 PF00037 4Fe-4S binding domain DYI95_007540 PF07732 Multicopper oxidase DYI95_007545 PF04055 Radical SAM superfamily DYI95_007545 PF13186 Iron-sulfur cluster-binding domain DYI95_007550 PF00394 Multicopper oxidase DYI95_007550 PF07731 Multicopper oxidase DYI95_007550 PF07732 Multicopper oxidase DYI95_007555 PF13545 Crp-like helix-turn-helix domain DYI95_007555 PF00027 Cyclic nucleotide-binding domain DYI95_007570 PF00171 Aldehyde dehydrogenase family DYI95_007575 PF00268 Ribonucleotide reductase, small chain DYI95_007580 PF00107 Zinc-binding dehydrogenase DYI95_007580 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_007580 PF13823 Alcohol dehydrogenase GroES-associated DYI95_007590 PF00440 Bacterial regulatory proteins, tetR family DYI95_007595 PF00132 Bacterial transferase hexapeptide (six repeats) DYI95_007595 PF12804 MobA-like NTP transferase domain DYI95_007610 PF03109 ABC1 family DYI95_007625 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DYI95_007625 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DYI95_007630 PF00294 pfkB family carbohydrate kinase DYI95_007635 PF00294 pfkB family carbohydrate kinase DYI95_007640 PF04227 Indigoidine synthase A like protein DYI95_007650 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_007650 PF07724 AAA domain (Cdc48 subfamily) DYI95_007650 PF10431 C-terminal, D2-small domain, of ClpB protein DYI95_007650 PF17871 AAA lid domain DYI95_007650 PF02861 Clp amino terminal domain, pathogenicity island component DYI95_007655 PF01325 Iron dependent repressor, N-terminal DNA binding domain DYI95_007655 PF00480 ROK family DYI95_007660 PF01547 Bacterial extracellular solute-binding protein DYI95_007665 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_007670 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_007675 PF04041 beta-1,4-mannooligosaccharide phosphorylase DYI95_007695 PF00665 Integrase core domain DYI95_007695 PF02796 Helix-turn-helix domain of resolvase DYI95_007700 PF01695 IstB-like ATP binding protein DYI95_007740 PF01546 Peptidase family M20/M25/M40 DYI95_007745 PF00005 ABC transporter DYI95_007760 PF01266 FAD dependent oxidoreductase DYI95_007765 PF00266 Aminotransferase class-V DYI95_007775 PF02515 CoA-transferase family III DYI95_007780 PF00176 SNF2 family N-terminal domain DYI95_007780 PF00271 Helicase conserved C-terminal domain DYI95_007780 PF12419 SNF2 Helicase protein DYI95_007785 PF00578 AhpC/TSA family DYI95_007790 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) DYI95_007795 PF00403 Heavy-metal-associated domain DYI95_007800 PF02583 Metal-sensitive transcriptional repressor DYI95_007840 PF00403 Heavy-metal-associated domain DYI95_007845 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_007845 PF00403 Heavy-metal-associated domain DYI95_007845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI95_007850 PF02583 Metal-sensitive transcriptional repressor DYI95_007855 PF00403 Heavy-metal-associated domain DYI95_007870 PF01435 Peptidase family M48 DYI95_007890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_007890 PF00512 His Kinase A (phospho-acceptor) domain DYI95_007890 PF00672 HAMP domain DYI95_007895 PF00486 Transcriptional regulatory protein, C terminal DYI95_007895 PF00072 Response regulator receiver domain DYI95_007910 PF00578 AhpC/TSA family DYI95_007915 PF08241 Methyltransferase domain DYI95_007925 PF00873 AcrB/AcrD/AcrF family DYI95_007935 PF13439 Glycosyltransferase Family 4 DYI95_007940 PF01734 Patatin-like phospholipase DYI95_007970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_007970 PF18698 Histidine kinase sensor domain DYI95_007970 PF00512 His Kinase A (phospho-acceptor) domain DYI95_007970 PF00989 PAS fold DYI95_007970 PF00672 HAMP domain DYI95_007980 PF00486 Transcriptional regulatory protein, C terminal DYI95_007980 PF00072 Response regulator receiver domain DYI95_007985 PF13193 AMP-binding enzyme C-terminal domain DYI95_007985 PF00501 AMP-binding enzyme DYI95_008005 PF00072 Response regulator receiver domain DYI95_008005 PF00486 Transcriptional regulatory protein, C terminal DYI95_008010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_008010 PF00512 His Kinase A (phospho-acceptor) domain DYI95_008015 PF00005 ABC transporter DYI95_008040 PF00375 Sodium:dicarboxylate symporter family DYI95_008045 PF00378 Enoyl-CoA hydratase/isomerase DYI95_008050 PF16582 Middle domain of thiamine pyrophosphate DYI95_008050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI95_008050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_008055 PF00425 chorismate binding enzyme DYI95_008070 PF01053 Cys/Met metabolism PLP-dependent enzyme DYI95_008085 PF08267 Cobalamin-independent synthase, N-terminal domain DYI95_008085 PF01717 Cobalamin-independent synthase, Catalytic domain DYI95_008090 PF00857 Isochorismatase family DYI95_008095 PF00486 Transcriptional regulatory protein, C terminal DYI95_008095 PF00072 Response regulator receiver domain DYI95_008100 PF00578 AhpC/TSA family DYI95_008105 PF01266 FAD dependent oxidoreductase DYI95_008105 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DYI95_008110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DYI95_008110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DYI95_008115 PF00381 PTS HPr component phosphorylation site DYI95_008115 PF03610 PTS system fructose IIA component DYI95_008115 PF05524 PEP-utilising enzyme, N-terminal DYI95_008115 PF00391 PEP-utilising enzyme, mobile domain DYI95_008120 PF02734 DAK2 domain DYI95_008125 PF02733 Dak1 domain DYI95_008130 PF00230 Major intrinsic protein DYI95_008140 PF01451 Low molecular weight phosphotyrosine protein phosphatase DYI95_008145 PF01895 PhoU domain DYI95_008150 PF00005 ABC transporter DYI95_008155 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_008160 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_008165 PF12849 PBP superfamily domain DYI95_008170 PF00512 His Kinase A (phospho-acceptor) domain DYI95_008170 PF00989 PAS fold DYI95_008170 PF16736 Single Cache-like DYI95_008170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_008180 PF02641 Uncharacterized ACR, COG1993 DYI95_008185 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DYI95_008190 PF03741 Integral membrane protein TerC family DYI95_008195 PF00206 Lyase DYI95_008195 PF10415 Fumarase C C-terminus DYI95_008220 PF04239 Protein of unknown function (DUF421) DYI95_008225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYI95_008235 PF00753 Metallo-beta-lactamase superfamily DYI95_008240 PF03099 Biotin/lipoate A/B protein ligase family DYI95_008245 PF04055 Radical SAM superfamily DYI95_008245 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DYI95_008260 PF08827 Domain of unknown function (DUF1805) DYI95_008265 PF12822 ECF transporter, substrate-specific component DYI95_008275 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_008275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DYI95_008280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DYI95_008280 PF00364 Biotin-requiring enzyme DYI95_008280 PF02817 e3 binding domain DYI95_008285 PF02779 Transketolase, pyrimidine binding domain DYI95_008285 PF02780 Transketolase, C-terminal domain DYI95_008290 PF00676 Dehydrogenase E1 component DYI95_008300 PF13732 Domain of unknown function (DUF4162) DYI95_008300 PF00005 ABC transporter DYI95_008310 PF07690 Major Facilitator Superfamily DYI95_008325 PF07690 Major Facilitator Superfamily DYI95_008330 PF01040 UbiA prenyltransferase family DYI95_008335 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DYI95_008340 PF00115 Cytochrome C and Quinol oxidase polypeptide I DYI95_008345 PF18324 Hypothetical protein TT1725 DYI95_008345 PF00180 Isocitrate/isopropylmalate dehydrogenase DYI95_008350 PF00694 Aconitase C-terminal domain DYI95_008350 PF00330 Aconitase family (aconitate hydratase) DYI95_008355 PF00037 4Fe-4S binding domain DYI95_008360 PF05343 M42 glutamyl aminopeptidase DYI95_008365 PF05343 M42 glutamyl aminopeptidase DYI95_008370 PF05343 M42 glutamyl aminopeptidase DYI95_008380 PF00874 PRD domain DYI95_008380 PF03123 CAT RNA binding domain DYI95_008385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DYI95_008385 PF00367 phosphotransferase system, EIIB DYI95_008385 PF02378 Phosphotransferase system, EIIC DYI95_008390 PF00367 phosphotransferase system, EIIB DYI95_008390 PF02378 Phosphotransferase system, EIIC DYI95_008395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DYI95_008415 PF02829 3H domain DYI95_008415 PF08279 HTH domain DYI95_008425 PF00877 NlpC/P60 family DYI95_008425 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DYI95_008430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_008430 PF00005 ABC transporter DYI95_008435 PF12911 N-terminal TM domain of oligopeptide transport permease C DYI95_008435 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_008440 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_008445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_008455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DYI95_008455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DYI95_008460 PF07690 Major Facilitator Superfamily DYI95_008475 PF03551 Transcriptional regulator PadR-like family DYI95_008515 PF02754 Cysteine-rich domain DYI95_008520 PF13183 4Fe-4S dicluster domain DYI95_008520 PF02589 LUD domain DYI95_008520 PF11870 Domain of unknown function (DUF3390) DYI95_008525 PF00072 Response regulator receiver domain DYI95_008525 PF00486 Transcriptional regulatory protein, C terminal DYI95_008530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_008530 PF13492 GAF domain DYI95_008530 PF13493 Domain of unknown function (DUF4118) DYI95_008530 PF02702 Osmosensitive K+ channel His kinase sensor domain DYI95_008530 PF00512 His Kinase A (phospho-acceptor) domain DYI95_008540 PF02669 K+-transporting ATPase, c chain DYI95_008545 PF03814 Potassium-transporting ATPase A subunit DYI95_008565 PF00392 Bacterial regulatory proteins, gntR family DYI95_008600 PF01925 Sulfite exporter TauE/SafE DYI95_008605 PF04343 Protein of unknown function, DUF488 DYI95_008630 PF13302 Acetyltransferase (GNAT) domain DYI95_008645 PF00708 Acylphosphatase DYI95_008645 PF01300 Telomere recombination DYI95_008645 PF07503 HypF finger DYI95_008645 PF17788 HypF Kae1-like domain DYI95_008655 PF13580 SIS domain DYI95_008660 PF02769 AIR synthase related protein, C-terminal domain DYI95_008660 PF00586 AIR synthase related protein, N-terminal domain DYI95_008665 PF13386 Cytochrome C biogenesis protein transmembrane region DYI95_008670 PF01924 Hydrogenase formation hypA family DYI95_008680 PF01455 HupF/HypC family DYI95_008690 PF04324 BFD-like [2Fe-2S] binding domain DYI95_008690 PF01592 NifU-like N terminal domain DYI95_008690 PF01106 NifU-like domain DYI95_008715 PF00374 Nickel-dependent hydrogenase DYI95_008725 PF02492 CobW/HypB/UreG, nucleotide-binding domain DYI95_008730 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DYI95_008745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI95_008745 PF00205 Thiamine pyrophosphate enzyme, central domain DYI95_008745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_008750 PF01645 Conserved region in glutamate synthase DYI95_008750 PF13187 4Fe-4S dicluster domain DYI95_008760 PF00288 GHMP kinases N terminal domain DYI95_008760 PF08544 GHMP kinases C terminal DYI95_008765 PF00291 Pyridoxal-phosphate dependent enzyme DYI95_008780 PF13193 AMP-binding enzyme C-terminal domain DYI95_008780 PF00501 AMP-binding enzyme DYI95_008780 PF16177 Acetyl-coenzyme A synthetase N-terminus DYI95_008805 PF13478 XdhC Rossmann domain DYI95_008805 PF02625 XdhC and CoxI family DYI95_008810 PF12706 Beta-lactamase superfamily domain DYI95_008815 PF02146 Sir2 family DYI95_008830 PF12867 DinB superfamily DYI95_008835 PF00800 Prephenate dehydratase DYI95_008835 PF01817 Chorismate mutase type II DYI95_008835 PF01842 ACT domain DYI95_008860 PF00463 Isocitrate lyase family DYI95_008865 PF10369 Small subunit of acetolactate synthase DYI95_008870 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DYI95_008870 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DYI95_008875 PF00682 HMGL-like DYI95_008875 PF08502 LeuA allosteric (dimerisation) domain DYI95_008880 PF00330 Aconitase family (aconitate hydratase) DYI95_008885 PF00694 Aconitase C-terminal domain DYI95_008890 PF00180 Isocitrate/isopropylmalate dehydrogenase DYI95_008895 PF00920 Dehydratase family DYI95_008900 PF00205 Thiamine pyrophosphate enzyme, central domain DYI95_008900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DYI95_008900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DYI95_008905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_008905 PF00005 ABC transporter DYI95_008910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DYI95_008910 PF00005 ABC transporter DYI95_008920 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_008925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DYI95_008930 PF01546 Peptidase family M20/M25/M40 DYI95_008930 PF07687 Peptidase dimerisation domain DYI95_008935 PF07687 Peptidase dimerisation domain DYI95_008935 PF01546 Peptidase family M20/M25/M40 DYI95_008945 PF00005 ABC transporter DYI95_008950 PF02361 Cobalt transport protein DYI95_008960 PF07687 Peptidase dimerisation domain DYI95_008960 PF01546 Peptidase family M20/M25/M40 DYI95_008970 PF00180 Isocitrate/isopropylmalate dehydrogenase DYI95_008980 PF00171 Aldehyde dehydrogenase family DYI95_008985 PF00202 Aminotransferase class-III DYI95_009020 PF01177 Asp/Glu/Hydantoin racemase DYI95_009030 PF09339 IclR helix-turn-helix domain DYI95_009030 PF01614 Bacterial transcriptional regulator DYI95_009040 PF00266 Aminotransferase class-V DYI95_009045 PF01321 Creatinase/Prolidase N-terminal domain DYI95_009045 PF00557 Metallopeptidase family M24 DYI95_009050 PF00171 Aldehyde dehydrogenase family DYI95_009065 PF13452 N-terminal half of MaoC dehydratase DYI95_009070 PF00171 Aldehyde dehydrogenase family DYI95_009075 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_009075 PF00107 Zinc-binding dehydrogenase DYI95_009080 PF00753 Metallo-beta-lactamase superfamily DYI95_009085 PF13193 AMP-binding enzyme C-terminal domain DYI95_009085 PF00501 AMP-binding enzyme DYI95_009090 PF02126 Phosphotriesterase family DYI95_009095 PF00753 Metallo-beta-lactamase superfamily DYI95_009110 PF13452 N-terminal half of MaoC dehydratase DYI95_009115 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_009115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_009115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_009130 PF02653 Branched-chain amino acid transport system / permease component DYI95_009135 PF00501 AMP-binding enzyme DYI95_009135 PF13193 AMP-binding enzyme C-terminal domain DYI95_009140 PF00108 Thiolase, N-terminal domain DYI95_009140 PF02803 Thiolase, C-terminal domain DYI95_009155 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_009155 PF00107 Zinc-binding dehydrogenase DYI95_009160 PF03992 Antibiotic biosynthesis monooxygenase DYI95_009165 PF03323 Bacillus/Clostridium GerA spore germination protein DYI95_009170 PF05504 Spore germination B3/ GerAC like, C-terminal DYI95_009175 PF01425 Amidase DYI95_009195 PF00440 Bacterial regulatory proteins, tetR family DYI95_009200 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_009200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_009200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_009205 PF00501 AMP-binding enzyme DYI95_009205 PF13193 AMP-binding enzyme C-terminal domain DYI95_009220 PF07722 Peptidase C26 DYI95_009225 PF06271 RDD family DYI95_009240 PF03323 Bacillus/Clostridium GerA spore germination protein DYI95_009250 PF02667 Short chain fatty acid transporter DYI95_009260 PF02136 Nuclear transport factor 2 (NTF2) domain DYI95_009275 PF01625 Peptide methionine sulfoxide reductase DYI95_009280 PF13193 AMP-binding enzyme C-terminal domain DYI95_009280 PF00501 AMP-binding enzyme DYI95_009285 PF00378 Enoyl-CoA hydratase/isomerase DYI95_009300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DYI95_009300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DYI95_009300 PF02770 Acyl-CoA dehydrogenase, middle domain DYI95_009310 PF01039 Carboxyl transferase domain DYI95_009315 PF00501 AMP-binding enzyme DYI95_009315 PF13193 AMP-binding enzyme C-terminal domain DYI95_009335 PF07969 Amidohydrolase family DYI95_009345 PF00005 ABC transporter DYI95_009360 PF17863 AAA lid domain DYI95_009360 PF07726 ATPase family associated with various cellular activities (AAA) DYI95_009385 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DYI95_009385 PF01189 16S rRNA methyltransferase RsmB/F DYI95_009385 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DYI95_009390 PF00005 ABC transporter DYI95_009405 PF01293 Phosphoenolpyruvate carboxykinase DYI95_009445 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DYI95_009445 PF01297 Zinc-uptake complex component A periplasmic DYI95_009455 PF00005 ABC transporter DYI95_009460 PF00950 ABC 3 transport family DYI95_009485 PF17912 MalK OB fold domain DYI95_009485 PF03459 TOBE domain DYI95_009485 PF00005 ABC transporter DYI95_009490 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_009495 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_009505 PF13416 Bacterial extracellular solute-binding protein DYI95_009530 PF00563 EAL domain DYI95_009530 PF00990 Diguanylate cyclase, GGDEF domain DYI95_009530 PF08447 PAS fold DYI95_009530 PF08448 PAS fold DYI95_009555 PF00072 Response regulator receiver domain DYI95_009555 PF00990 Diguanylate cyclase, GGDEF domain DYI95_009565 PF13732 Domain of unknown function (DUF4162) DYI95_009565 PF00005 ABC transporter DYI95_009580 PF04542 Sigma-70 region 2 DYI95_009580 PF08281 Sigma-70, region 4 DYI95_009590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DYI95_009590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DYI95_009620 PF00583 Acetyltransferase (GNAT) family DYI95_009650 PF13732 Domain of unknown function (DUF4162) DYI95_009650 PF00005 ABC transporter DYI95_009660 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DYI95_009660 PF11867 Domain of unknown function (DUF3387) DYI95_009660 PF18766 SWI2/SNF2 ATPase DYI95_009670 PF02384 N-6 DNA Methylase DYI95_009670 PF12161 HsdM N-terminal domain DYI95_009675 PF00270 DEAD/DEAH box helicase DYI95_009675 PF09369 Domain of unknown function (DUF1998) DYI95_009675 PF00271 Helicase conserved C-terminal domain DYI95_009690 PF03060 Nitronate monooxygenase DYI95_009710 PF00578 AhpC/TSA family DYI95_009725 PF01883 Iron-sulfur cluster assembly protein DYI95_009730 PF00456 Transketolase, thiamine diphosphate binding domain DYI95_009735 PF02780 Transketolase, C-terminal domain DYI95_009735 PF02779 Transketolase, pyrimidine binding domain DYI95_009745 PF01297 Zinc-uptake complex component A periplasmic DYI95_009750 PF00950 ABC 3 transport family DYI95_009755 PF00005 ABC transporter DYI95_009780 PF02581 Thiamine monophosphate synthase DYI95_009780 PF08543 Phosphomethylpyrimidine kinase DYI95_009790 PF02110 Hydroxyethylthiazole kinase family DYI95_009795 PF02581 Thiamine monophosphate synthase DYI95_009800 PF07690 Major Facilitator Superfamily DYI95_009805 PF09587 Bacterial capsule synthesis protein PGA_cap DYI95_009815 PF00005 ABC transporter DYI95_009815 PF17912 MalK OB fold domain DYI95_009820 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_009835 PF00885 6,7-dimethyl-8-ribityllumazine synthase DYI95_009840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DYI95_009840 PF01872 RibD C-terminal domain DYI95_009845 PF03070 TENA/THI-4/PQQC family DYI95_009850 PF04893 Yip1 domain DYI95_009860 PF02687 FtsX-like permease family DYI95_009860 PF12704 MacB-like periplasmic core domain DYI95_009865 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DYI95_009870 PF02687 FtsX-like permease family DYI95_009870 PF12704 MacB-like periplasmic core domain DYI95_009870 PF00005 ABC transporter DYI95_009885 PF03972 MmgE/PrpD family DYI95_009890 PF00285 Citrate synthase, C-terminal domain DYI95_009920 PF00268 Ribonucleotide reductase, small chain DYI95_009925 PF03477 ATP cone domain DYI95_009925 PF00317 Ribonucleotide reductase, all-alpha domain DYI95_009925 PF02867 Ribonucleotide reductase, barrel domain DYI95_009930 PF03009 Glycerophosphoryl diester phosphodiesterase family DYI95_009935 PF17936 Bacterial Ig domain DYI95_009935 PF02872 5'-nucleotidase, C-terminal domain DYI95_009935 PF00149 Calcineurin-like phosphoesterase DYI95_009945 PF00501 AMP-binding enzyme DYI95_009945 PF13193 AMP-binding enzyme C-terminal domain DYI95_009955 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_009955 PF00107 Zinc-binding dehydrogenase DYI95_009965 PF00128 Alpha amylase, catalytic domain DYI95_009965 PF16657 Maltogenic Amylase, C-terminal domain DYI95_009970 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_009975 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_009985 PF17912 MalK OB fold domain DYI95_009985 PF00005 ABC transporter DYI95_009995 PF03741 Integral membrane protein TerC family DYI95_010005 PF00455 DeoR C terminal sensor domain DYI95_010005 PF08220 DeoR-like helix-turn-helix domain DYI95_010010 PF07005 Sugar-binding N-terminal domain DYI95_010010 PF17042 Nucleotide-binding C-terminal domain DYI95_010015 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DYI95_010020 PF02447 GntP family permease DYI95_010035 PF01479 S4 domain DYI95_010035 PF00849 RNA pseudouridylate synthase DYI95_010040 PF01592 NifU-like N terminal domain DYI95_010045 PF00581 Rhodanese-like domain DYI95_010055 PF00579 tRNA synthetases class I (W and Y) DYI95_010065 PF13462 Thioredoxin DYI95_010070 PF02600 Disulfide bond formation protein DsbB DYI95_010080 PF04234 CopC domain DYI95_010090 PF00313 'Cold-shock' DNA-binding domain DYI95_010095 PF07992 Pyridine nucleotide-disulphide oxidoreductase DYI95_010100 PF00381 PTS HPr component phosphorylation site DYI95_010105 PF05524 PEP-utilising enzyme, N-terminal DYI95_010105 PF00391 PEP-utilising enzyme, mobile domain DYI95_010105 PF02896 PEP-utilising enzyme, TIM barrel domain DYI95_010125 PF06071 Protein of unknown function (DUF933) DYI95_010125 PF01926 50S ribosome-binding GTPase DYI95_010135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DYI95_010135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DYI95_010140 PF00355 Rieske [2Fe-2S] domain DYI95_010145 PF01458 Uncharacterized protein family (UPF0051) DYI95_010155 PF00156 Phosphoribosyl transferase domain DYI95_010160 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DYI95_010165 PF01180 Dihydroorotate dehydrogenase DYI95_010175 PF02142 MGS-like domain DYI95_010175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DYI95_010175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI95_010180 PF00117 Glutamine amidotransferase class-I DYI95_010180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DYI95_010185 PF01979 Amidohydrolase family DYI95_010190 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DYI95_010190 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DYI95_010195 PF00403 Heavy-metal-associated domain DYI95_010200 PF01022 Bacterial regulatory protein, arsR family DYI95_010215 PF01476 LysM domain DYI95_010215 PF03734 L,D-transpeptidase catalytic domain DYI95_010220 PF01734 Patatin-like phospholipase DYI95_010240 PF02683 Cytochrome C biogenesis protein transmembrane region DYI95_010245 PF00269 Small, acid-soluble spore proteins, alpha/beta type DYI95_010255 PF00491 Arginase family DYI95_010265 PF00633 Helix-hairpin-helix motif DYI95_010265 PF00730 HhH-GPD superfamily base excision DNA repair protein DYI95_010265 PF14815 NUDIX domain DYI95_010270 PF10502 Signal peptidase, peptidase S26 DYI95_010285 PF00801 PKD domain DYI95_010285 PF05547 Immune inhibitor A peptidase M6 DYI95_010320 PF01171 PP-loop family DYI95_010335 PF04029 2-phosphosulpholactate phosphatase DYI95_010340 PF01261 Xylose isomerase-like TIM barrel DYI95_010345 PF01578 Cytochrome C assembly protein DYI95_010345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DYI95_010350 PF03918 Cytochrome C biogenesis protein DYI95_010355 PF07187 Protein of unknown function (DUF1405) DYI95_010360 PF07486 Cell Wall Hydrolase DYI95_010360 PF01471 Putative peptidoglycan binding domain DYI95_010365 PF01966 HD domain DYI95_010370 PF02391 MoaE protein DYI95_010375 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_010380 PF00005 ABC transporter DYI95_010395 PF05067 Manganese containing catalase DYI95_010405 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_010420 PF02913 FAD linked oxidases, C-terminal domain DYI95_010420 PF01565 FAD binding domain DYI95_010435 PF00072 Response regulator receiver domain DYI95_010440 PF00672 HAMP domain DYI95_010440 PF16591 Helical bimodular sensor domain DYI95_010440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DYI95_010445 PF01584 CheW-like domain DYI95_010450 PF01627 Hpt domain DYI95_010450 PF07194 P2 response regulator binding domain DYI95_010450 PF01584 CheW-like domain DYI95_010450 PF02895 Signal transducing histidine kinase, homodimeric domain DYI95_010450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_010455 PF01339 CheB methylesterase DYI95_010455 PF00072 Response regulator receiver domain DYI95_010475 PF16868 NMT1-like family DYI95_010480 PF05343 M42 glutamyl aminopeptidase DYI95_010495 PF08241 Methyltransferase domain DYI95_010510 PF01008 Initiation factor 2 subunit family DYI95_010535 PF05036 Sporulation related domain DYI95_010535 PF01520 N-acetylmuramoyl-L-alanine amidase DYI95_010555 PF00196 Bacterial regulatory proteins, luxR family DYI95_010555 PF00072 Response regulator receiver domain DYI95_010560 PF07730 Histidine kinase DYI95_010575 PF00005 ABC transporter DYI95_010585 PF00202 Aminotransferase class-III DYI95_010595 PF08240 Alcohol dehydrogenase GroES-like domain DYI95_010605 PF03979 Sigma-70 factor, region 1.1 DYI95_010605 PF00140 Sigma-70 factor, region 1.2 DYI95_010605 PF04542 Sigma-70 region 2 DYI95_010605 PF04545 Sigma-70, region 4 DYI95_010605 PF04539 Sigma-70 region 3 DYI95_010610 PF10410 DnaB-helicase binding domain of primase DYI95_010610 PF01807 CHC2 zinc finger DYI95_010610 PF08275 DNA primase catalytic core, N-terminal domain DYI95_010615 PF00108 Thiolase, N-terminal domain DYI95_010615 PF02803 Thiolase, C-terminal domain DYI95_010620 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DYI95_010620 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DYI95_010620 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain DYI95_010625 PF00378 Enoyl-CoA hydratase/isomerase DYI95_010630 PF01883 Iron-sulfur cluster assembly protein DYI95_010645 PF05138 Phenylacetic acid catabolic protein DYI95_010650 PF00440 Bacterial regulatory proteins, tetR family DYI95_010650 PF17754 MftR C-terminal domain DYI95_010670 PF01695 IstB-like ATP binding protein DYI95_010675 PF02796 Helix-turn-helix domain of resolvase DYI95_010675 PF00665 Integrase core domain DYI95_010680 PF01548 Transposase DYI95_010680 PF02371 Transposase IS116/IS110/IS902 family DYI95_010690 PF00005 ABC transporter DYI95_010690 PF13732 Domain of unknown function (DUF4162) DYI95_010700 PF04397 LytTr DNA-binding domain DYI95_010700 PF00072 Response regulator receiver domain DYI95_010705 PF06580 Histidine kinase DYI95_010705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DYI95_010705 PF13492 GAF domain DYI95_010705 PF07694 5TMR of 5TMR-LYT DYI95_010710 PF01063 Amino-transferase class IV DYI95_010715 PF01544 CorA-like Mg2+ transporter protein DYI95_010735 PF00528 Binding-protein-dependent transport system inner membrane component DYI95_010745 PF02585 GlcNAc-PI de-N-acetylase DYI95_010750 PF06965 Na+/H+ antiporter 1 DYI95_010755 PF03471 Transporter associated domain DYI95_010755 PF00999 Sodium/hydrogen exchanger family DYI95_010755 PF02080 TrkA-C domain DYI95_010760 PF00391 PEP-utilising enzyme, mobile domain DYI95_010760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DYI95_010760 PF02896 PEP-utilising enzyme, TIM barrel domain DYI95_010765 PF03618 Kinase/pyrophosphorylase DYI95_010770 PF02092 Glycyl-tRNA synthetase beta subunit DYI95_010770 PF05746 DALR anticodon binding domain DYI95_010775 PF02091 Glycyl-tRNA synthetase alpha subunit DYI95_010785 PF11967 Recombination protein O N terminal DYI95_010785 PF02565 Recombination protein O C terminal DYI95_010790 PF01769 Divalent cation transporter DYI95_010790 PF00571 CBS domain DYI95_010790 PF03448 MgtE intracellular N domain DYI95_010795 PF07650 KH domain DYI95_010795 PF01926 50S ribosome-binding GTPase DYI95_010800 PF11258 Protein of unknown function (DUF3048) N-terminal domain DYI95_010800 PF17479 Protein of unknown function (DUF3048) C-terminal domain DYI95_010805 PF01219 Prokaryotic diacylglycerol kinase DYI95_010810 PF02130 Uncharacterized protein family UPF0054 DYI95_010815 PF07698 7TM receptor with intracellular HD hydrolase DYI95_010815 PF07697 7TM-HD extracellular DYI95_010815 PF01966 HD domain DYI95_010820 PF02562 PhoH-like protein DYI95_010840 PF12127 SigmaW regulon antibacterial DYI95_010845 PF01957 NfeD-like C-terminal, partner-binding DYI95_010845 PF01972 Serine dehydrogenase proteinase DYI95_010855 PF01165 Ribosomal protein S21 DYI95_010860 PF01230 HIT domain DYI95_010865 PF07478 D-ala D-ala ligase C-terminus DYI95_010865 PF01820 D-ala D-ala ligase N-terminus DYI95_010870 PF04452 RNA methyltransferase DYI95_010880 PF00684 DnaJ central domain DYI95_010880 PF01556 DnaJ C terminal domain DYI95_010880 PF00226 DnaJ domain DYI95_010885 PF00012 Hsp70 protein DYI95_010890 PF01025 GrpE DYI95_010895 PF01628 HrcA protein C terminal domain DYI95_010905 PF00009 Elongation factor Tu GTP binding domain DYI95_010905 PF00679 Elongation factor G C-terminus DYI95_010905 PF06421 GTP-binding protein LepA C-terminus DYI95_010905 PF03144 Elongation factor Tu domain 2 DYI95_010925 PF01649 Ribosomal protein S20 DYI95_010930 PF06144 DNA polymerase III, delta subunit DYI95_010935 PF03772 Competence protein DYI95_010935 PF13567 Domain of unknown function (DUF4131) DYI95_010935 PF00753 Metallo-beta-lactamase superfamily DYI95_010945 PF08264 Anticodon-binding domain of tRNA DYI95_010945 PF09334 tRNA synthetases class I (M) DYI95_010945 PF00133 tRNA synthetases class I (I, L, M and V) DYI95_010945 PF13603 Leucyl-tRNA synthetase, Domain 2 DYI95_010960 PF03816 Cell envelope-related transcriptional attenuator domain DYI95_010965 PF01966 HD domain DYI95_010970 PF01467 Cytidylyltransferase-like DYI95_010975 PF01926 50S ribosome-binding GTPase DYI95_010975 PF01018 GTP1/OBG DYI95_010975 PF09269 Domain of unknown function (DUF1967) DYI95_010985 PF01016 Ribosomal L27 protein DYI95_010990 PF04327 Cysteine protease Prp DYI95_010995 PF00829 Ribosomal prokaryotic L21 protein DYI95_011000 PF00575 S1 RNA binding domain DYI95_011000 PF10150 Ribonuclease E/G family DYI95_011005 PF00571 CBS domain DYI95_011005 PF02163 Peptidase family M50 DYI95_011010 PF01551 Peptidase family M23 DYI95_011015 PF01098 Cell cycle protein DYI95_011020 PF03776 Septum formation topological specificity factor MinE DYI95_011025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DYI95_011030 PF03775 Septum formation inhibitor MinC, C-terminal domain DYI95_011035 PF00905 Penicillin binding protein transpeptidase domain DYI95_011035 PF03717 Penicillin-binding Protein dimerisation domain DYI95_011045 PF04085 rod shape-determining protein MreC DYI95_011055 PF04002 RadC-like JAB domain DYI95_011060 PF02545 Maf-like protein DYI95_011070 PF08264 Anticodon-binding domain of tRNA DYI95_011070 PF10458 Valyl tRNA synthetase tRNA binding arm DYI95_011070 PF00133 tRNA synthetases class I (I, L, M and V) DYI95_011075 PF13302 Acetyltransferase (GNAT) domain DYI95_011080 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_011080 PF05362 Lon protease (S16) C-terminal proteolytic domain DYI95_011085 PF07724 AAA domain (Cdc48 subfamily) DYI95_011085 PF06689 ClpX C4-type zinc finger DYI95_011085 PF10431 C-terminal, D2-small domain, of ClpB protein DYI95_011090 PF00574 Clp protease DYI95_011095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DYI95_011095 PF05698 Bacterial trigger factor protein (TF) C-terminus DYI95_011095 PF05697 Bacterial trigger factor protein (TF) DYI95_011110 PF17284 Spermidine synthase tetramerisation domain DYI95_011120 PF00324 Amino acid permease DYI95_011155 PF01725 Ham1 family DYI95_011160 PF13941 MutL protein DYI95_011165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DYI95_011170 PF11798 IMS family HHH motif DYI95_011170 PF11799 impB/mucB/samB family C-terminal domain DYI95_011170 PF00817 impB/mucB/samB family DYI95_011180 PF01668 SmpB protein DYI95_011185 PF08206 Ribonuclease B OB domain DYI95_011185 PF17876 Cold shock domain DYI95_011185 PF00773 RNB domain DYI95_011185 PF00575 S1 RNA binding domain DYI95_011190 PF03030 Inorganic H+ pyrophosphatase DYI95_011195 PF03840 Preprotein translocase SecG subunit DYI95_011200 PF00113 Enolase, C-terminal TIM barrel domain DYI95_011200 PF03952 Enolase, N-terminal domain DYI95_011205 PF01676 Metalloenzyme superfamily DYI95_011205 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DYI95_011210 PF00121 Triosephosphate isomerase DYI95_011215 PF00162 Phosphoglycerate kinase DYI95_011220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DYI95_011220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DYI95_011230 PF00202 Aminotransferase class-III DYI95_011235 PF01790 Prolipoprotein diacylglyceryl transferase DYI95_011245 PF00171 Aldehyde dehydrogenase family DYI95_011250 PF01475 Ferric uptake regulator family DYI95_011255 PF17820 PDZ domain DYI95_011255 PF13180 PDZ domain DYI95_011285 PF02374 Anion-transporting ATPase DYI95_011290 PF02374 Anion-transporting ATPase DYI95_011290 PF17886 HSP20-like domain found in ArsA DYI95_011300 PF13722 5TM C-terminal transporter carbon starvation CstA DYI95_011300 PF02554 Carbon starvation protein CstA DYI95_011310 PF02785 Biotin carboxylase C-terminal domain DYI95_011310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DYI95_011310 PF00289 Biotin carboxylase, N-terminal domain DYI95_011315 PF00380 Ribosomal protein S9/S16 DYI95_011320 PF00572 Ribosomal protein L13 DYI95_011325 PF01416 tRNA pseudouridine synthase DYI95_011330 PF02361 Cobalt transport protein DYI95_011335 PF00005 ABC transporter DYI95_011340 PF00005 ABC transporter DYI95_011345 PF01196 Ribosomal protein L17 DYI95_011350 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DYI95_011350 PF01000 RNA polymerase Rpb3/RpoA insert domain DYI95_011350 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DYI95_011355 PF00411 Ribosomal protein S11 DYI95_011360 PF00416 Ribosomal protein S13/S18 DYI95_011365 PF00444 Ribosomal protein L36 DYI95_011370 PF01176 Translation initiation factor 1A / IF-1 DYI95_011380 PF00557 Metallopeptidase family M24 DYI95_011385 PF05191 Adenylate kinase, active site lid DYI95_011390 PF00344 SecY translocase DYI95_011395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DYI95_011400 PF00333 Ribosomal protein S5, N-terminal domain DYI95_011400 PF03719 Ribosomal protein S5, C-terminal domain DYI95_011405 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DYI95_011410 PF00347 Ribosomal protein L6 DYI95_011415 PF00410 Ribosomal protein S8 DYI95_011420 PF00253 Ribosomal protein S14p/S29e DYI95_011425 PF00281 Ribosomal protein L5 DYI95_011425 PF00673 ribosomal L5P family C-terminus DYI95_011430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DYI95_011430 PF00467 KOW motif DYI95_011435 PF00238 Ribosomal protein L14p/L23e DYI95_011440 PF00366 Ribosomal protein S17 DYI95_011445 PF00831 Ribosomal L29 protein DYI95_011450 PF00252 Ribosomal protein L16p/L10e DYI95_011455 PF00189 Ribosomal protein S3, C-terminal domain DYI95_011455 PF07650 KH domain DYI95_011460 PF00237 Ribosomal protein L22p/L17e DYI95_011465 PF00203 Ribosomal protein S19 DYI95_011470 PF00181 Ribosomal Proteins L2, RNA binding domain DYI95_011470 PF03947 Ribosomal Proteins L2, C-terminal domain DYI95_011475 PF00276 Ribosomal protein L23 DYI95_011480 PF00573 Ribosomal protein L4/L1 family DYI95_011485 PF00297 Ribosomal protein L3 DYI95_011490 PF00338 Ribosomal protein S10p/S20e DYI95_011495 PF00009 Elongation factor Tu GTP binding domain DYI95_011495 PF03143 Elongation factor Tu C-terminal domain DYI95_011495 PF03144 Elongation factor Tu domain 2 DYI95_011500 PF03144 Elongation factor Tu domain 2 DYI95_011500 PF00009 Elongation factor Tu GTP binding domain DYI95_011500 PF14492 Elongation Factor G, domain II DYI95_011500 PF00679 Elongation factor G C-terminus DYI95_011500 PF03764 Elongation factor G, domain IV DYI95_011505 PF00177 Ribosomal protein S7p/S5e DYI95_011510 PF00164 Ribosomal protein S12/S23 DYI95_011515 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DYI95_011520 PF04998 RNA polymerase Rpb1, domain 5 DYI95_011520 PF05000 RNA polymerase Rpb1, domain 4 DYI95_011520 PF04983 RNA polymerase Rpb1, domain 3 DYI95_011520 PF00623 RNA polymerase Rpb1, domain 2 DYI95_011520 PF04997 RNA polymerase Rpb1, domain 1 DYI95_011525 PF04561 RNA polymerase Rpb2, domain 2 DYI95_011525 PF10385 RNA polymerase beta subunit external 1 domain DYI95_011525 PF00562 RNA polymerase Rpb2, domain 6 DYI95_011525 PF04560 RNA polymerase Rpb2, domain 7 DYI95_011525 PF04565 RNA polymerase Rpb2, domain 3 DYI95_011525 PF04563 RNA polymerase beta subunit DYI95_011530 PF00542 Ribosomal protein L7/L12 C-terminal domain DYI95_011530 PF16320 Ribosomal protein L7/L12 dimerisation domain DYI95_011535 PF00466 Ribosomal protein L10 DYI95_011540 PF00687 Ribosomal protein L1p/L10e family DYI95_011545 PF00298 Ribosomal protein L11, RNA binding domain DYI95_011545 PF03946 Ribosomal protein L11, N-terminal domain DYI95_011550 PF00467 KOW motif DYI95_011550 PF02357 Transcription termination factor nusG DYI95_011555 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DYI95_011565 PF00471 Ribosomal protein L33 DYI95_011595 PF08281 Sigma-70, region 4 DYI95_011595 PF04542 Sigma-70 region 2 DYI95_011600 PF08032 RNA 2'-O ribose methyltransferase substrate binding DYI95_011600 PF00588 SpoU rRNA Methylase family DYI95_011605 PF01406 tRNA synthetases class I (C) catalytic domain DYI95_011605 PF09190 DALR domain DYI95_011610 PF06426 Serine acetyltransferase, N-terminal DYI95_011610 PF00132 Bacterial transferase hexapeptide (six repeats) DYI95_011615 PF03330 Lytic transglycolase DYI95_011620 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DYI95_011620 PF02542 YgbB family DYI95_011630 PF02559 CarD-like/TRCF domain DYI95_011640 PF14306 PUA-like domain DYI95_011640 PF01747 ATP-sulfurylase DYI95_011645 PF01507 Phosphoadenosine phosphosulfate reductase family DYI95_011650 PF00633 Helix-hairpin-helix motif DYI95_011650 PF02457 DisA bacterial checkpoint controller nucleotide-binding DYI95_011650 PF10635 DisA bacterial checkpoint controller linker region DYI95_011655 PF18073 Rubredoxin metal binding domain DYI95_011660 PF10431 C-terminal, D2-small domain, of ClpB protein DYI95_011660 PF02861 Clp amino terminal domain, pathogenicity island component DYI95_011660 PF00004 ATPase family associated with various cellular activities (AAA) DYI95_011660 PF17871 AAA lid domain DYI95_011660 PF07724 AAA domain (Cdc48 subfamily) DYI95_011665 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DYI95_011675 PF05848 CtsR N-terminal HTH domain DYI95_011675 PF17727 CtsR C-terminal dimerization domain DYI95_011680 PF07969 Amidohydrolase family DYI95_011685 PF03091 CutA1 divalent ion tolerance protein DYI95_011690 PF01037 Lrp/AsnC ligand binding domain DYI95_011695 PF00202 Aminotransferase class-III DYI95_011700 PF13545 Crp-like helix-turn-helix domain DYI95_011700 PF00027 Cyclic nucleotide-binding domain DYI95_011720 PF01343 Peptidase family S49 DYI95_011725 PF06418 CTP synthase N-terminus DYI95_011725 PF00117 Glutamine amidotransferase class-I DYI95_011730 PF03485 Arginyl tRNA synthetase N terminal domain DYI95_011730 PF05746 DALR anticodon binding domain DYI95_011730 PF00750 tRNA synthetases class I (R) DYI95_011735 PF00491 Arginase family DYI95_011740 PF17284 Spermidine synthase tetramerisation domain DYI95_011750 PF00905 Penicillin binding protein transpeptidase domain DYI95_011750 PF00912 Transglycosylase DYI95_011755 PF02590 Predicted SPOUT methyltransferase DYI95_011760 PF13180 PDZ domain DYI95_011770 PF01464 Transglycosylase SLT domain DYI95_011770 PF10145 Phage-related minor tail protein DYI95_011770 PF01551 Peptidase family M23 DYI95_011795 PF00709 Adenylosuccinate synthetase DYI95_011800 PF03796 DnaB-like helicase C terminal domain DYI95_011800 PF00772 DnaB-like helicase N terminal domain DYI95_011805 PF03948 Ribosomal protein L9, C-terminal domain DYI95_011805 PF01281 Ribosomal protein L9, N-terminal domain DYI95_011815 PF01084 Ribosomal protein S18 DYI95_011820 PF00436 Single-strand binding protein family DYI95_011825 PF01250 Ribosomal protein S6 DYI95_011830 PF06107 Bacterial protein of unknown function (DUF951) DYI95_011840 PF00005 ABC transporter DYI95_011845 PF00005 ABC transporter DYI95_011845 PF12399 Branched-chain amino acid ATP-binding cassette transporter DYI95_011850 PF02653 Branched-chain amino acid transport system / permease component DYI95_011850 PF11862 Domain of unknown function (DUF3382) DYI95_011855 PF02653 Branched-chain amino acid transport system / permease component DYI95_011860 PF13458 Periplasmic binding protein DYI95_011865 PF06866 Protein of unknown function (DUF1256) DYI95_011870 PF00781 Diacylglycerol kinase catalytic domain DYI95_011880 PF02195 ParB-like nuclease domain DYI95_011880 PF17762 HTH domain found in ParB protein DYI95_011885 PF13614 AAA domain DYI95_011890 PF17762 HTH domain found in ParB protein DYI95_011890 PF02195 ParB-like nuclease domain DYI95_011895 PF02527 rRNA small subunit methyltransferase G DYI95_011905 PF02096 60Kd inner membrane protein DYI95_011910 PF01809 Putative membrane protein insertion efficiency factor DYI95_011915 PF00825 Ribonuclease P DYI95_011920 PF00468 Ribosomal protein L34