TherJR_0001 SM00382 ATPases associated with a variety of cellular activities TherJR_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain TherJR_0002 SM00480 DNA polymerase III beta subunit TherJR_0008 SM00387 Histidine kinase-like ATPases TherJR_0008 SM00433 TopoisomeraseII TherJR_0009 SM00434 DNA Topoisomerase IV TherJR_0016 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0016 SM00876 Biotin and Thiamin Synthesis associated domain TherJR_0017 SM00345 helix_turn_helix gluconate operon transcriptional repressor TherJR_0018 SM00382 ATPases associated with a variety of cellular activities TherJR_0020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_0020 SM00245 tail specific protease TherJR_0023 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0027 SM01018 B12 binding domain TherJR_0029 SM00382 ATPases associated with a variety of cellular activities TherJR_0032 SM00877 TherJR_0032 TherJR_0037 SM00877 TherJR_0037 TherJR_0040 SM00877 TherJR_0040 TherJR_0043 SM00877 TherJR_0043 TherJR_0045 SM00877 TherJR_0045 TherJR_0046 SM00877 TherJR_0046 TherJR_0051 SM00342 helix_turn_helix, arabinose operon control protein TherJR_0052 SM01018 B12 binding domain TherJR_0054 SM00382 ATPases associated with a variety of cellular activities TherJR_0055 SM00327 von Willebrand factor (vWF) type A domain TherJR_0058 SM01018 B12 binding domain TherJR_0065 SM00382 ATPases associated with a variety of cellular activities TherJR_0066 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain TherJR_0068 SM00382 ATPases associated with a variety of cellular activities TherJR_0070 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_0070 SM00493 TherJR_0070 TherJR_0072 SM00830 Chorismate mutase type II TherJR_0092 SM00966 SpoVT / AbrB like domain TherJR_0101 SM01208 TherJR_0101 TherJR_0102 SM00650 Ribosomal RNA adenine dimethylases TherJR_0106 SM00257 Lysin motif TherJR_0110 SM00260 Two component signalling adaptor domain TherJR_0111 SM00073 Histidine Phosphotransfer domain TherJR_0111 SM00260 Two component signalling adaptor domain TherJR_0111 SM00387 Histidine kinase-like ATPases TherJR_0111 SM01231 TherJR_0111 TherJR_0112 SM00448 cheY-homologous receiver domain TherJR_0113 SM00448 cheY-homologous receiver domain TherJR_0116 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0116 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_0118 SM00028 Tetratricopeptide repeats TherJR_0123 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0123 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_0128 SM00345 helix_turn_helix gluconate operon transcriptional repressor TherJR_0128 SM00895 TherJR_0128 TherJR_0132 SM01400 TherJR_0132 TherJR_0142 SM00834 Putative regulatory protein TherJR_0143 SM01018 B12 binding domain TherJR_0149 SM00363 S4 RNA-binding domain TherJR_0158 SM00257 Lysin motif TherJR_0158 SM01208 TherJR_0158 TherJR_0161 SM00749 bacterial OsmY and nodulation domain TherJR_0163 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0163 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_0165 SM00849 Metallo-beta-lactamase superfamily TherJR_0171 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0173 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_0178 SM00487 DEAD-like helicases superfamily TherJR_0178 SM00490 helicase superfamily c-terminal domain TherJR_0178 SM00982 TherJR_0178 TherJR_0178 SM01058 CarD-like/TRCF domain TherJR_0180 SM00966 SpoVT / AbrB like domain TherJR_0183 SM00411 bacterial (prokaryotic) histone like domain TherJR_0184 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0184 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_0185 SM00363 S4 RNA-binding domain TherJR_0191 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_0202 SM00331 Sigma factor PP2C-like phosphatases TherJR_0204 SM00977 TilS substrate C-terminal domain TherJR_0205 SM00382 ATPases associated with a variety of cellular activities TherJR_0206 SM00562 TherJR_0206 TherJR_0209 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_0211 SM00905 Dihydroneopterin aldolase TherJR_0222 SM00327 von Willebrand factor (vWF) type A domain TherJR_0223 SM00382 ATPases associated with a variety of cellular activities TherJR_0238 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0239 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0243 SM00382 ATPases associated with a variety of cellular activities TherJR_0243 SM01086 C-terminal, D2-small domain, of ClpB protein TherJR_0247 SM00331 Sigma factor PP2C-like phosphatases TherJR_0248 SM00382 ATPases associated with a variety of cellular activities TherJR_0251 SM01058 CarD-like/TRCF domain TherJR_0252 SM00670 Large family of predicted nucleotide-binding domains TherJR_0270 SM00840 TherJR_0270 TherJR_0271 SM00535 Ribonuclease III family TherJR_0273 SM00967 RNA 2'-O ribose methyltransferase substrate binding TherJR_0277 SM00347 helix_turn_helix multiple antibiotic resistance protein TherJR_0282 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TherJR_0282 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TherJR_0283 SM00649 Ribosomal protein L11/L12 TherJR_0289 SM00663 RNA polymerase I subunit A N-terminus TherJR_0293 SM00838 Elongation factor G C-terminus TherJR_0293 SM00889 Elongation factor G, domain IV TherJR_0295 SM01403 TherJR_0295 TherJR_0299 SM01382 TherJR_0299 TherJR_0299 SM01383 TherJR_0299 TherJR_0302 SM00322 K homology RNA-binding domain TherJR_0306 SM01374 TherJR_0306 TherJR_0307 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TherJR_0319 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_0323 SM00363 S4 RNA-binding domain TherJR_0323 SM01390 TherJR_0323 TherJR_0324 SM00662 RNA polymerases D TherJR_0327 SM00382 ATPases associated with a variety of cellular activities TherJR_0328 SM00382 ATPases associated with a variety of cellular activities TherJR_0335 SM00646 TherJR_0335 TherJR_0337 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0346 SM00859 Semialdehyde dehydrogenase, NAD binding domain TherJR_0352 SM00851 MGS-like domain TherJR_0352 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TherJR_0363 SM00917 LeuA allosteric (dimerisation) domain TherJR_0366 SM01329 TherJR_0366 TherJR_0367 SM00917 LeuA allosteric (dimerisation) domain TherJR_0381 SM00858 TherJR_0381 TherJR_0410 SM00530 Helix-turn-helix XRE-family like proteins TherJR_0412 SM00267 diguanylate cyclase TherJR_0417 SM00382 ATPases associated with a variety of cellular activities TherJR_0419 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_0419 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TherJR_0422 SM01068 Putative carbohydrate binding domain TherJR_0424 SM00267 diguanylate cyclase TherJR_0443 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TherJR_0448 SM00347 helix_turn_helix multiple antibiotic resistance protein TherJR_0450 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TherJR_0452 SM00450 Rhodanese Homology Domain TherJR_0456 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TherJR_0471 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TherJR_0475 SM00014 Acid phosphatase homologues TherJR_0481 SM00382 ATPases associated with a variety of cellular activities TherJR_0497 SM00450 Rhodanese Homology Domain TherJR_0504 SM00382 ATPases associated with a variety of cellular activities TherJR_0512 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_0515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_0516 SM00091 PAS domain TherJR_0516 SM00331 Sigma factor PP2C-like phosphatases TherJR_0518 SM00014 Acid phosphatase homologues TherJR_0519 SM00347 helix_turn_helix multiple antibiotic resistance protein TherJR_0531 SM00966 SpoVT / AbrB like domain TherJR_0537 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_0537 SM00382 ATPases associated with a variety of cellular activities TherJR_0543 SM00421 helix_turn_helix, Lux Regulon TherJR_0545 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0546 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0553 SM00422 helix_turn_helix, mercury resistance TherJR_0555 SM00421 helix_turn_helix, Lux Regulon TherJR_0559 SM00382 ATPases associated with a variety of cellular activities TherJR_0568 SM00421 helix_turn_helix, Lux Regulon TherJR_0590 SM00487 DEAD-like helicases superfamily TherJR_0590 SM00490 helicase superfamily c-terminal domain TherJR_0600 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_0602 SM00382 ATPases associated with a variety of cellular activities TherJR_0608 SM00988 UreE urease accessory protein, N-terminal domain TherJR_0614 SM00387 Histidine kinase-like ATPases TherJR_0615 SM00342 helix_turn_helix, arabinose operon control protein TherJR_0615 SM00448 cheY-homologous receiver domain TherJR_0616 SM00877 TherJR_0616 TherJR_0617 SM00877 TherJR_0617 TherJR_0623 SM00877 TherJR_0623 TherJR_0624 SM00877 TherJR_0624 TherJR_0626 SM00842 Cell division protein FtsA TherJR_0632 SM00877 TherJR_0632 TherJR_0636 SM00100 Cyclic nucleotide-monophosphate binding domain TherJR_0636 SM00419 helix_turn_helix, cAMP Regulatory protein TherJR_0639 SM00481 DNA polymerase alpha chain like domain TherJR_0645 SM00257 Lysin motif TherJR_0646 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_0650 SM00091 PAS domain TherJR_0650 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_0651 SM00387 Histidine kinase-like ATPases TherJR_0652 SM00448 cheY-homologous receiver domain TherJR_0652 SM00850 LytTr DNA-binding domain TherJR_0653 SM00260 Two component signalling adaptor domain TherJR_0656 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_0657 SM01005 Alanine racemase, C-terminal domain TherJR_0658 SM01245 TherJR_0658 TherJR_0659 SM00448 cheY-homologous receiver domain TherJR_0659 SM01012 TherJR_0659 TherJR_0661 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0662 SM00448 cheY-homologous receiver domain TherJR_0662 SM01012 TherJR_0662 TherJR_0667 SM00530 Helix-turn-helix XRE-family like proteins TherJR_0689 SM00938 Nitrogen regulatory protein P-II TherJR_0690 SM00938 Nitrogen regulatory protein P-II TherJR_0695 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0700 SM00382 ATPases associated with a variety of cellular activities TherJR_0703 SM00938 Nitrogen regulatory protein P-II TherJR_0706 SM00938 Nitrogen regulatory protein P-II TherJR_0707 SM00938 Nitrogen regulatory protein P-II TherJR_0708 SM00448 cheY-homologous receiver domain TherJR_0708 SM01012 TherJR_0708 TherJR_0709 SM01230 TherJR_0709 TherJR_0710 SM01230 TherJR_0710 TherJR_0723 SM00448 cheY-homologous receiver domain TherJR_0734 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_0734 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0741 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TherJR_0742 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_0742 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TherJR_0743 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_0743 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TherJR_0746 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_0749 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_0755 SM00670 Large family of predicted nucleotide-binding domains TherJR_0757 SM00852 Probable molybdopterin binding domain TherJR_0758 SM00852 Probable molybdopterin binding domain TherJR_0759 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0762 SM00852 Probable molybdopterin binding domain TherJR_0763 SM00382 ATPases associated with a variety of cellular activities TherJR_0769 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_0774 SM00883 Chaperonin 10 Kd subunit TherJR_0777 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_0780 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_0785 SM00460 Transglutaminase/protease-like homologues TherJR_0789 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_0794 SM00382 ATPases associated with a variety of cellular activities TherJR_0795 SM00220 Serine/Threonine protein kinases, catalytic domain TherJR_0797 SM00387 Histidine kinase-like ATPases TherJR_0797 SM00388 His Kinase A (phosphoacceptor) domain TherJR_0798 SM00448 cheY-homologous receiver domain TherJR_0799 SM00382 ATPases associated with a variety of cellular activities TherJR_0800 SM00382 ATPases associated with a variety of cellular activities TherJR_0817 SM00382 ATPases associated with a variety of cellular activities TherJR_0822 SM01211 TherJR_0822 TherJR_0824 SM01001 AIR carboxylase TherJR_0825 SM00998 Adenylosuccinate lyase C-terminus TherJR_0830 SM00798 AICARFT/IMPCHase bienzyme TherJR_0830 SM00851 MGS-like domain TherJR_0831 SM01209 TherJR_0831 TherJR_0831 SM01210 TherJR_0831 TherJR_0833 SM00387 Histidine kinase-like ATPases TherJR_0843 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_0843 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_0850 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_0850 SM00292 breast cancer carboxy-terminal domain TherJR_0850 SM00532 Ligase N family TherJR_0856 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TherJR_0861 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_0861 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TherJR_0872 SM00845 GatB domain TherJR_0875 SM01329 TherJR_0875 TherJR_0879 SM00382 ATPases associated with a variety of cellular activities TherJR_0882 SM01066 Carbohydrate binding domain TherJR_0896 SM00530 Helix-turn-helix XRE-family like proteins TherJR_0897 SM00382 ATPases associated with a variety of cellular activities TherJR_0901 SM00487 DEAD-like helicases superfamily TherJR_0903 SM00670 Large family of predicted nucleotide-binding domains TherJR_0909 SM00155 Phospholipase D. Active site motifs. TherJR_0915 SM00670 Large family of predicted nucleotide-binding domains TherJR_0918 SM00347 helix_turn_helix multiple antibiotic resistance protein TherJR_0923 SM00382 ATPases associated with a variety of cellular activities TherJR_0926 SM00271 DnaJ molecular chaperone homology domain TherJR_0928 SM00382 ATPases associated with a variety of cellular activities TherJR_0928 SM01086 C-terminal, D2-small domain, of ClpB protein TherJR_0931 SM00450 Rhodanese Homology Domain TherJR_0942 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_0942 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TherJR_0945 SM00357 Cold shock protein domain TherJR_0949 SM00947 Carbonic anhydrase TherJR_0954 SM00028 Tetratricopeptide repeats TherJR_0955 SM00028 Tetratricopeptide repeats TherJR_0956 SM00028 Tetratricopeptide repeats TherJR_0960 SM00028 Tetratricopeptide repeats TherJR_0963 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TherJR_0963 SM00475 5'-3' exonuclease TherJR_0963 SM00482 DNA polymerase A domain TherJR_0964 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain TherJR_0964 SM01232 TherJR_0964 TherJR_0971 SM00382 ATPases associated with a variety of cellular activities TherJR_0972 SM00382 ATPases associated with a variety of cellular activities TherJR_0983 SM01018 B12 binding domain TherJR_0984 SM01018 B12 binding domain TherJR_0985 SM00091 PAS domain TherJR_0985 SM00382 ATPases associated with a variety of cellular activities TherJR_0986 SM01018 B12 binding domain TherJR_0988 SM01018 B12 binding domain TherJR_0994 SM00052 Putative diguanylate phosphodiesterase TherJR_0994 SM00267 diguanylate cyclase TherJR_0997 SM00052 Putative diguanylate phosphodiesterase TherJR_0997 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TherJR_0997 SM00091 PAS domain TherJR_0997 SM00267 diguanylate cyclase TherJR_1003 SM00382 ATPases associated with a variety of cellular activities TherJR_1004 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_1012 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1015 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TherJR_1016 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TherJR_1020 SM00028 Tetratricopeptide repeats TherJR_1023 SM00135 Low-density lipoprotein-receptor YWTD domain TherJR_1024 SM00060 Fibronectin type 3 domain TherJR_1025 SM00060 Fibronectin type 3 domain TherJR_1034 SM00914 TherJR_1034 TherJR_1036 SM00481 DNA polymerase alpha chain like domain TherJR_1039 SM00646 TherJR_1039 TherJR_1046 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TherJR_1046 SM00267 diguanylate cyclase TherJR_1046 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1046 SM00897 FIST N domain TherJR_1046 SM01204 TherJR_1046 TherJR_1049 SM00028 Tetratricopeptide repeats TherJR_1065 SM00487 DEAD-like helicases superfamily TherJR_1065 SM00490 helicase superfamily c-terminal domain TherJR_1066 SM00487 DEAD-like helicases superfamily TherJR_1066 SM00490 helicase superfamily c-terminal domain TherJR_1070 SM00487 DEAD-like helicases superfamily TherJR_1070 SM00490 helicase superfamily c-terminal domain TherJR_1075 SM00530 Helix-turn-helix XRE-family like proteins TherJR_1078 SM00028 Tetratricopeptide repeats TherJR_1080 SM00481 DNA polymerase alpha chain like domain TherJR_1084 SM00382 ATPases associated with a variety of cellular activities TherJR_1086 SM00028 Tetratricopeptide repeats TherJR_1093 SM00382 ATPases associated with a variety of cellular activities TherJR_1094 SM00382 ATPases associated with a variety of cellular activities TherJR_1108 SM00382 ATPases associated with a variety of cellular activities TherJR_1120 SM00028 Tetratricopeptide repeats TherJR_1127 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1130 SM00060 Fibronectin type 3 domain TherJR_1137 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1138 SM01004 Delta-aminolevulinic acid dehydratase TherJR_1139 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1140 SM00344 helix_turn_helix ASNC type TherJR_1144 SM00138 Methyltransferase, chemotaxis proteins TherJR_1145 SM00842 Cell division protein FtsA TherJR_1147 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1167 SM00257 Lysin motif TherJR_1174 SM00930 TherJR_1174 TherJR_1181 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_1182 SM00382 ATPases associated with a variety of cellular activities TherJR_1191 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_1191 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TherJR_1193 SM00382 ATPases associated with a variety of cellular activities TherJR_1195 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_1195 SM00387 Histidine kinase-like ATPases TherJR_1195 SM00388 His Kinase A (phosphoacceptor) domain TherJR_1196 SM00448 cheY-homologous receiver domain TherJR_1196 SM00862 Transcriptional regulatory protein, C terminal TherJR_1201 SM01323 TherJR_1201 TherJR_1205 SM00487 DEAD-like helicases superfamily TherJR_1205 SM00490 helicase superfamily c-terminal domain TherJR_1205 SM00910 TherJR_1205 TherJR_1206 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1206 SM00954 Region found in RelA / SpoT proteins TherJR_1208 SM00849 Metallo-beta-lactamase superfamily TherJR_1211 SM00481 DNA polymerase alpha chain like domain TherJR_1216 SM00257 Lysin motif TherJR_1220 SM00448 cheY-homologous receiver domain TherJR_1220 SM00862 Transcriptional regulatory protein, C terminal TherJR_1221 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_1221 SM00387 Histidine kinase-like ATPases TherJR_1221 SM00388 His Kinase A (phosphoacceptor) domain TherJR_1233 SM00382 ATPases associated with a variety of cellular activities TherJR_1234 SM00382 ATPases associated with a variety of cellular activities TherJR_1242 SM00382 ATPases associated with a variety of cellular activities TherJR_1259 SM00382 ATPases associated with a variety of cellular activities TherJR_1265 SM00382 ATPases associated with a variety of cellular activities TherJR_1277 SM00382 ATPases associated with a variety of cellular activities TherJR_1279 SM00322 K homology RNA-binding domain TherJR_1279 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1286 SM00257 Lysin motif TherJR_1287 SM00318 Staphylococcal nuclease homologues TherJR_1299 SM00382 ATPases associated with a variety of cellular activities TherJR_1306 SM00382 ATPases associated with a variety of cellular activities TherJR_1313 SM00855 Phosphoglycerate mutase family TherJR_1319 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_1319 SM01240 TherJR_1319 TherJR_1321 SM00382 ATPases associated with a variety of cellular activities TherJR_1324 SM00899 TherJR_1324 TherJR_1343 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TherJR_1343 SM00267 diguanylate cyclase TherJR_1348 SM00448 cheY-homologous receiver domain TherJR_1348 SM00862 Transcriptional regulatory protein, C terminal TherJR_1349 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_1349 SM00387 Histidine kinase-like ATPases TherJR_1349 SM00388 His Kinase A (phosphoacceptor) domain TherJR_1366 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_1371 SM00479 TherJR_1371 TherJR_1371 SM00481 DNA polymerase alpha chain like domain TherJR_1374 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_1374 SM00322 K homology RNA-binding domain TherJR_1381 SM00904 Riboflavin kinase TherJR_1384 SM01387 TherJR_1384 TherJR_1385 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_1385 SM00322 K homology RNA-binding domain TherJR_1386 SM00518 AP endonuclease family 2 TherJR_1388 SM00257 Lysin motif TherJR_1389 SM00636 TherJR_1389 TherJR_1391 SM00936 Penicillin-binding protein 5, C-terminal domain TherJR_1399 SM00859 Semialdehyde dehydrogenase, NAD binding domain TherJR_1401 SM01130 TherJR_1401 TherJR_1402 SM00849 Metallo-beta-lactamase superfamily TherJR_1406 SM00382 ATPases associated with a variety of cellular activities TherJR_1406 SM00843 TherJR_1406 TherJR_1417 SM00450 Rhodanese Homology Domain TherJR_1418 SM00530 Helix-turn-helix XRE-family like proteins TherJR_1419 SM00028 Tetratricopeptide repeats TherJR_1423 SM00060 Fibronectin type 3 domain TherJR_1425 SM00060 Fibronectin type 3 domain TherJR_1432 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1433 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1436 SM00382 ATPases associated with a variety of cellular activities TherJR_1437 SM00852 Probable molybdopterin binding domain TherJR_1439 SM00487 DEAD-like helicases superfamily TherJR_1439 SM00490 helicase superfamily c-terminal domain TherJR_1440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1446 SM00382 ATPases associated with a variety of cellular activities TherJR_1465 SM00530 Helix-turn-helix XRE-family like proteins TherJR_1472 SM00382 ATPases associated with a variety of cellular activities TherJR_1475 SM00382 ATPases associated with a variety of cellular activities TherJR_1487 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1489 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TherJR_1489 SM00534 ATPase domain of DNA mismatch repair MUTS family TherJR_1492 SM00853 MutL C terminal dimerisation domain TherJR_1492 SM01340 TherJR_1492 TherJR_1496 SM00411 bacterial (prokaryotic) histone like domain TherJR_1497 SM00382 ATPases associated with a variety of cellular activities TherJR_1499 SM00267 diguanylate cyclase TherJR_1499 SM00448 cheY-homologous receiver domain TherJR_1502 SM00257 Lysin motif TherJR_1503 SM00091 PAS domain TherJR_1506 SM00919 Malic enzyme, NAD binding domain TherJR_1506 SM01274 TherJR_1506 TherJR_1516 SM00260 Two component signalling adaptor domain TherJR_1517 SM00073 Histidine Phosphotransfer domain TherJR_1517 SM00260 Two component signalling adaptor domain TherJR_1517 SM00387 Histidine kinase-like ATPases TherJR_1517 SM01231 TherJR_1517 TherJR_1518 SM00448 cheY-homologous receiver domain TherJR_1521 SM00382 ATPases associated with a variety of cellular activities TherJR_1521 SM00962 SRP54-type protein, GTPase domain TherJR_1528 SM00448 cheY-homologous receiver domain TherJR_1539 SM00382 ATPases associated with a variety of cellular activities TherJR_1547 SM00382 ATPases associated with a variety of cellular activities TherJR_1547 SM01086 C-terminal, D2-small domain, of ClpB protein TherJR_1551 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TherJR_1551 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TherJR_1551 SM00493 TherJR_1551 TherJR_1555 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen TherJR_1559 SM00257 Lysin motif TherJR_1572 SM00382 ATPases associated with a variety of cellular activities TherJR_1576 SM00646 TherJR_1576 TherJR_1581 SM01207 TherJR_1581 TherJR_1590 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_1591 SM00563 Phosphate acyltransferases TherJR_1595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_1595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_1596 SM00260 Two component signalling adaptor domain TherJR_1621 SM00530 Helix-turn-helix XRE-family like proteins TherJR_1623 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1627 SM00363 S4 RNA-binding domain TherJR_1640 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_1657 SM00387 Histidine kinase-like ATPases TherJR_1659 SM00936 Penicillin-binding protein 5, C-terminal domain TherJR_1663 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TherJR_1682 SM00530 Helix-turn-helix XRE-family like proteins TherJR_1684 SM00091 PAS domain TherJR_1684 SM00382 ATPases associated with a variety of cellular activities TherJR_1689 SM00448 cheY-homologous receiver domain TherJR_1690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_1691 SM00382 ATPases associated with a variety of cellular activities TherJR_1698 SM00363 S4 RNA-binding domain TherJR_1699 SM00861 Transketolase, pyrimidine binding domain TherJR_1710 SM00257 Lysin motif TherJR_1719 SM00878 Biotin carboxylase C-terminal domain TherJR_1728 SM00382 ATPases associated with a variety of cellular activities TherJR_1729 SM00052 Putative diguanylate phosphodiesterase TherJR_1729 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) TherJR_1729 SM00091 PAS domain TherJR_1729 SM00267 diguanylate cyclase TherJR_1731 SM00841 Elongation factor P, C-terminal TherJR_1731 SM01185 TherJR_1731 TherJR_1745 SM00842 Cell division protein FtsA TherJR_1753 SM00382 ATPases associated with a variety of cellular activities TherJR_1754 SM00382 ATPases associated with a variety of cellular activities TherJR_1765 SM00267 diguanylate cyclase TherJR_1765 SM00448 cheY-homologous receiver domain TherJR_1770 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1772 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1787 SM00220 Serine/Threonine protein kinases, catalytic domain TherJR_1787 SM00740 TherJR_1787 TherJR_1790 SM00331 Sigma factor PP2C-like phosphatases TherJR_1790 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TherJR_1791 SM00240 Forkhead associated domain TherJR_1792 SM00240 Forkhead associated domain TherJR_1793 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1798 SM00487 DEAD-like helicases superfamily TherJR_1798 SM00490 helicase superfamily c-terminal domain TherJR_1808 SM01409 TherJR_1808 TherJR_1809 SM00072 Guanylate kinase homologues. TherJR_1821 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_1822 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_1823 SM00838 Elongation factor G C-terminus TherJR_1827 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TherJR_1830 SM00851 MGS-like domain TherJR_1830 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TherJR_1830 SM01209 TherJR_1830 TherJR_1831 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TherJR_1837 SM00363 S4 RNA-binding domain TherJR_1846 SM00028 Tetratricopeptide repeats TherJR_1848 SM00421 helix_turn_helix, Lux Regulon TherJR_1848 SM00448 cheY-homologous receiver domain TherJR_1855 SM01245 TherJR_1855 TherJR_1856 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_1860 SM01152 TherJR_1860 TherJR_1862 SM00363 S4 RNA-binding domain TherJR_1865 SM00463 Small MutS-related domain TherJR_1865 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TherJR_1865 SM00534 ATPase domain of DNA mismatch repair MUTS family TherJR_1868 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_1868 SM00481 DNA polymerase alpha chain like domain TherJR_1868 SM00483 DNA polymerase X family TherJR_1870 SM00873 B3/4 domain TherJR_1870 SM00874 tRNA synthetase B5 domain TherJR_1870 SM00896 Ferredoxin-fold anticodon binding domain TherJR_1872 SM00967 RNA 2'-O ribose methyltransferase substrate binding TherJR_1878 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TherJR_1883 SM00382 ATPases associated with a variety of cellular activities TherJR_1890 SM00487 DEAD-like helicases superfamily TherJR_1898 SM01208 TherJR_1898 TherJR_1900 SM00732 Likely ribonuclease with RNase H fold. TherJR_1904 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TherJR_1916 SM00382 ATPases associated with a variety of cellular activities TherJR_1926 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_1934 SM00267 diguanylate cyclase TherJR_1935 SM00028 Tetratricopeptide repeats TherJR_1939 SM00028 Tetratricopeptide repeats TherJR_1942 SM00382 ATPases associated with a variety of cellular activities TherJR_1945 SM00382 ATPases associated with a variety of cellular activities TherJR_1947 SM00387 Histidine kinase-like ATPases TherJR_1947 SM00388 His Kinase A (phosphoacceptor) domain TherJR_1959 SM00479 TherJR_1959 TherJR_1959 SM00487 DEAD-like helicases superfamily TherJR_1959 SM00488 TherJR_1959 TherJR_1959 SM00491 TherJR_1959 TherJR_1961 SM00834 Putative regulatory protein TherJR_1970 SM00100 Cyclic nucleotide-monophosphate binding domain TherJR_1970 SM00419 helix_turn_helix, cAMP Regulatory protein TherJR_1977 SM00220 Serine/Threonine protein kinases, catalytic domain TherJR_1980 SM00478 endonuclease III TherJR_1986 SM00903 Flavin reductase like domain TherJR_1992 SM00763 PrkA AAA domain TherJR_1995 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TherJR_2004 SM00382 ATPases associated with a variety of cellular activities TherJR_2010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2024 SM00091 PAS domain TherJR_2026 SM00382 ATPases associated with a variety of cellular activities TherJR_2039 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2051 SM00382 ATPases associated with a variety of cellular activities TherJR_2051 SM00962 SRP54-type protein, GTPase domain TherJR_2051 SM00963 SRP54-type protein, helical bundle domain TherJR_2057 SM01007 Class II Aldolase and Adducin N-terminal domain TherJR_2058 SM00996 S-adenosyl-L-homocysteine hydrolase TherJR_2058 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TherJR_2061 SM00382 ATPases associated with a variety of cellular activities TherJR_2061 SM00962 SRP54-type protein, GTPase domain TherJR_2061 SM00963 SRP54-type protein, helical bundle domain TherJR_2063 SM00968 SMC proteins Flexible Hinge Domain TherJR_2064 SM00267 diguanylate cyclase TherJR_2069 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2070 SM00358 Double-stranded RNA binding motif TherJR_2070 SM00535 Ribonuclease III family TherJR_2071 SM00825 Beta-ketoacyl synthase TherJR_2074 SM00822 TherJR_2074 TherJR_2075 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TherJR_2090 SM00984 UDP binding domain TherJR_2095 SM00902 Iron hydrogenase small subunit TherJR_2095 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TherJR_2098 SM00028 Tetratricopeptide repeats TherJR_2099 SM00487 DEAD-like helicases superfamily TherJR_2099 SM00490 helicase superfamily c-terminal domain TherJR_2101 SM01120 TherJR_2101 TherJR_2101 SM01121 TherJR_2101 TherJR_2111 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2112 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2120 SM00363 S4 RNA-binding domain TherJR_2127 SM00382 ATPases associated with a variety of cellular activities TherJR_2128 SM00091 PAS domain TherJR_2128 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_2128 SM00387 Histidine kinase-like ATPases TherJR_2128 SM00388 His Kinase A (phosphoacceptor) domain TherJR_2129 SM00448 cheY-homologous receiver domain TherJR_2129 SM00862 Transcriptional regulatory protein, C terminal TherJR_2131 SM00257 Lysin motif TherJR_2137 SM00257 Lysin motif TherJR_2152 SM00864 Tubulin/FtsZ family, GTPase domain TherJR_2152 SM00865 Tubulin/FtsZ family, C-terminal domain TherJR_2153 SM00842 Cell division protein FtsA TherJR_2166 SM00740 TherJR_2166 TherJR_2172 SM00481 DNA polymerase alpha chain like domain TherJR_2188 SM00947 Carbonic anhydrase TherJR_2190 SM00382 ATPases associated with a variety of cellular activities TherJR_2197 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_2197 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_2200 SM00936 Penicillin-binding protein 5, C-terminal domain TherJR_2205 SM00646 TherJR_2205 TherJR_2206 SM00838 Elongation factor G C-terminus TherJR_2206 SM00889 Elongation factor G, domain IV TherJR_2209 SM00450 Rhodanese Homology Domain TherJR_2210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_2210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_2212 SM00422 helix_turn_helix, mercury resistance TherJR_2216 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2229 SM00852 Probable molybdopterin binding domain TherJR_2230 SM00852 Probable molybdopterin binding domain TherJR_2231 SM00382 ATPases associated with a variety of cellular activities TherJR_2236 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_2236 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TherJR_2252 SM00382 ATPases associated with a variety of cellular activities TherJR_2253 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_2257 SM00382 ATPases associated with a variety of cellular activities TherJR_2258 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TherJR_2264 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TherJR_2265 SM00346 helix_turn_helix isocitrate lyase regulation TherJR_2269 SM00382 ATPases associated with a variety of cellular activities TherJR_2269 SM00930 TherJR_2269 TherJR_2271 SM00232 JAB/MPN domain TherJR_2278 SM00382 ATPases associated with a variety of cellular activities TherJR_2299 SM00244 prohibitin homologues TherJR_2303 SM00400 zinc finger TherJR_2303 SM00493 TherJR_2303 TherJR_2305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2308 SM00382 ATPases associated with a variety of cellular activities TherJR_2315 SM00448 cheY-homologous receiver domain TherJR_2315 SM00862 Transcriptional regulatory protein, C terminal TherJR_2316 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_2323 SM00052 Putative diguanylate phosphodiesterase TherJR_2323 SM00267 diguanylate cyclase TherJR_2331 SM00481 DNA polymerase alpha chain like domain TherJR_2332 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2333 SM00052 Putative diguanylate phosphodiesterase TherJR_2337 SM00849 Metallo-beta-lactamase superfamily TherJR_2342 SM00382 ATPases associated with a variety of cellular activities TherJR_2343 SM00100 Cyclic nucleotide-monophosphate binding domain TherJR_2343 SM00419 helix_turn_helix, cAMP Regulatory protein TherJR_2350 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_2357 SM01208 TherJR_2357 TherJR_2368 SM00478 endonuclease III TherJR_2379 SM00849 Metallo-beta-lactamase superfamily TherJR_2383 SM00448 cheY-homologous receiver domain TherJR_2383 SM00862 Transcriptional regulatory protein, C terminal TherJR_2384 SM00387 Histidine kinase-like ATPases TherJR_2384 SM00388 His Kinase A (phosphoacceptor) domain TherJR_2398 SM00382 ATPases associated with a variety of cellular activities TherJR_2402 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_2417 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_2417 SM00924 MgtE intracellular N domain TherJR_2422 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2423 SM00322 K homology RNA-binding domain TherJR_2431 SM00331 Sigma factor PP2C-like phosphatases TherJR_2431 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain TherJR_2432 SM00240 Forkhead associated domain TherJR_2442 SM00240 Forkhead associated domain TherJR_2442 SM00862 Transcriptional regulatory protein, C terminal TherJR_2446 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2449 SM00271 DnaJ molecular chaperone homology domain TherJR_2454 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2455 SM00838 Elongation factor G C-terminus TherJR_2463 SM00849 Metallo-beta-lactamase superfamily TherJR_2464 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_2468 SM00382 ATPases associated with a variety of cellular activities TherJR_2471 SM00926 Molybdopterin oxidoreductase Fe4S4 domain TherJR_2475 SM00357 Cold shock protein domain TherJR_2487 SM00382 ATPases associated with a variety of cellular activities TherJR_2500 SM00091 PAS domain TherJR_2500 SM00382 ATPases associated with a variety of cellular activities TherJR_2501 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TherJR_2505 SM01078 TherJR_2505 TherJR_2507 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain TherJR_2511 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2513 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2514 SM00360 RNA recognition motif TherJR_2518 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TherJR_2519 SM01103 TherJR_2519 TherJR_2534 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_2536 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2551 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TherJR_2553 SM00881 CoA binding domain TherJR_2556 SM00530 Helix-turn-helix XRE-family like proteins TherJR_2560 SM00382 ATPases associated with a variety of cellular activities TherJR_2560 SM00464 Found in ATP-dependent protease La (LON) TherJR_2561 SM00382 ATPases associated with a variety of cellular activities TherJR_2562 SM00382 ATPases associated with a variety of cellular activities TherJR_2562 SM00994 ClpX C4-type zinc finger TherJR_2562 SM01086 C-terminal, D2-small domain, of ClpB protein TherJR_2568 SM00849 Metallo-beta-lactamase superfamily TherJR_2571 SM00345 helix_turn_helix gluconate operon transcriptional repressor TherJR_2572 SM00287 Bacterial SH3 domain homologues TherJR_2572 SM00646 TherJR_2572 TherJR_2573 SM00909 Sporulation and spore germination TherJR_2585 SM00062 Bacterial periplasmic substrate-binding proteins TherJR_2586 SM00382 ATPases associated with a variety of cellular activities TherJR_2593 SM00481 DNA polymerase alpha chain like domain TherJR_2601 SM00849 Metallo-beta-lactamase superfamily TherJR_2603 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2604 SM00487 DEAD-like helicases superfamily TherJR_2604 SM00490 helicase superfamily c-terminal domain TherJR_2608 SM00382 ATPases associated with a variety of cellular activities TherJR_2611 SM00342 helix_turn_helix, arabinose operon control protein TherJR_2619 SM01018 B12 binding domain TherJR_2622 SM00345 helix_turn_helix gluconate operon transcriptional repressor TherJR_2622 SM00866 TherJR_2622 TherJR_2623 SM01018 B12 binding domain TherJR_2628 SM01018 B12 binding domain TherJR_2630 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TherJR_2630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_2633 SM00382 ATPases associated with a variety of cellular activities TherJR_2636 SM00382 ATPases associated with a variety of cellular activities TherJR_2638 SM00448 cheY-homologous receiver domain TherJR_2638 SM00862 Transcriptional regulatory protein, C terminal TherJR_2639 SM00387 Histidine kinase-like ATPases TherJR_2639 SM00388 His Kinase A (phosphoacceptor) domain TherJR_2640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_2640 SM00387 Histidine kinase-like ATPases TherJR_2640 SM00388 His Kinase A (phosphoacceptor) domain TherJR_2641 SM00448 cheY-homologous receiver domain TherJR_2641 SM00862 Transcriptional regulatory protein, C terminal TherJR_2645 SM00382 ATPases associated with a variety of cellular activities TherJR_2656 SM00793 Accessory gene regulator B TherJR_2660 SM00052 Putative diguanylate phosphodiesterase TherJR_2660 SM00091 PAS domain TherJR_2660 SM00267 diguanylate cyclase TherJR_2664 SM00529 Helix-turn-helix diphteria tox regulatory element TherJR_2665 SM00382 ATPases associated with a variety of cellular activities TherJR_2666 SM00382 ATPases associated with a variety of cellular activities TherJR_2670 SM01133 TherJR_2670 TherJR_2677 SM00422 helix_turn_helix, mercury resistance TherJR_2682 SM00347 helix_turn_helix multiple antibiotic resistance protein TherJR_2683 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TherJR_2683 SM00387 Histidine kinase-like ATPases TherJR_2683 SM00388 His Kinase A (phosphoacceptor) domain TherJR_2684 SM00448 cheY-homologous receiver domain TherJR_2684 SM00862 Transcriptional regulatory protein, C terminal TherJR_2686 SM00382 ATPases associated with a variety of cellular activities TherJR_2692 SM00530 Helix-turn-helix XRE-family like proteins TherJR_2693 SM00316 Ribosomal protein S1-like RNA-binding domain TherJR_2693 SM00357 Cold shock protein domain TherJR_2693 SM00955 TherJR_2693 TherJR_2694 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2700 SM00382 ATPases associated with a variety of cellular activities TherJR_2701 SM00345 helix_turn_helix gluconate operon transcriptional repressor TherJR_2703 SM00382 ATPases associated with a variety of cellular activities TherJR_2704 SM00345 helix_turn_helix gluconate operon transcriptional repressor TherJR_2707 SM01192 TherJR_2707 TherJR_2707 SM01193 TherJR_2707 TherJR_2711 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TherJR_2714 SM00849 Metallo-beta-lactamase superfamily TherJR_2720 SM00481 DNA polymerase alpha chain like domain TherJR_2722 SM00481 DNA polymerase alpha chain like domain TherJR_2730 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_2730 SM01131 TherJR_2730 TherJR_2731 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TherJR_2731 SM00465 GIY-YIG type nucleases (URI domain) TherJR_2733 SM00487 DEAD-like helicases superfamily TherJR_2733 SM00490 helicase superfamily c-terminal domain TherJR_2735 SM00986 Uracil DNA glycosylase superfamily TherJR_2735 SM00987 UreE urease accessory protein, C-terminal domain TherJR_2737 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_2738 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TherJR_2738 SM00245 tail specific protease TherJR_2741 SM00382 ATPases associated with a variety of cellular activities TherJR_2760 SM00448 cheY-homologous receiver domain TherJR_2760 SM00850 LytTr DNA-binding domain TherJR_2761 SM00793 Accessory gene regulator B TherJR_2762 SM00387 Histidine kinase-like ATPases TherJR_2764 SM00861 Transketolase, pyrimidine binding domain TherJR_2768 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2771 SM00957 SecA DEAD-like domain TherJR_2771 SM00958 SecA preprotein cross-linking domain TherJR_2773 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2774 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TherJR_2777 SM00357 Cold shock protein domain TherJR_2780 SM00858 TherJR_2780 TherJR_2785 SM00116 Domain in cystathionine beta-synthase and other proteins. TherJR_2803 SM00487 DEAD-like helicases superfamily TherJR_2803 SM00490 helicase superfamily c-terminal domain TherJR_2804 SM00267 diguanylate cyclase TherJR_2805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TherJR_2805 SM00267 diguanylate cyclase TherJR_2810 SM00448 cheY-homologous receiver domain TherJR_2811 SM00858 TherJR_2811 TherJR_2817 SM00421 helix_turn_helix, Lux Regulon TherJR_2817 SM00448 cheY-homologous receiver domain TherJR_2818 SM00387 Histidine kinase-like ATPases TherJR_2855 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2857 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2859 SM00635 Bacterial Ig-like domain 2 TherJR_2863 SM00060 Fibronectin type 3 domain TherJR_2864 SM00060 Fibronectin type 3 domain TherJR_2868 SM00028 Tetratricopeptide repeats TherJR_2874 SM00966 SpoVT / AbrB like domain TherJR_2887 SM00382 ATPases associated with a variety of cellular activities TherJR_2900 SM00226 Low molecular weight phosphatase family TherJR_2905 SM00937 TherJR_2905 TherJR_2908 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_2909 SM00257 Lysin motif TherJR_2912 SM00357 Cold shock protein domain TherJR_2912 SM00382 ATPases associated with a variety of cellular activities TherJR_2912 SM00959 Rho termination factor, N-terminal domain TherJR_2919 SM00448 cheY-homologous receiver domain TherJR_2924 SM00836 DALR anticodon binding domain TherJR_2924 SM01016 Arginyl tRNA synthetase N terminal dom TherJR_2931 SM00344 helix_turn_helix ASNC type TherJR_2935 SM00387 Histidine kinase-like ATPases TherJR_2935 SM00388 His Kinase A (phosphoacceptor) domain TherJR_2944 SM01018 B12 binding domain TherJR_2950 SM01018 B12 binding domain TherJR_2951 SM00342 helix_turn_helix, arabinose operon control protein TherJR_2968 SM00100 Cyclic nucleotide-monophosphate binding domain TherJR_2968 SM00419 helix_turn_helix, cAMP Regulatory protein TherJR_2971 SM00788 Adenylosuccinate synthetase TherJR_2972 SM00382 ATPases associated with a variety of cellular activities TherJR_2973 SM00382 ATPases associated with a variety of cellular activities TherJR_2983 SM00567 E-Z type HEAT repeats TherJR_2992 SM00382 ATPases associated with a variety of cellular activities TherJR_3000 SM01001 AIR carboxylase TherJR_3005 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_3005 SM00876 Biotin and Thiamin Synthesis associated domain TherJR_3006 SM00729 Elongator protein 3, MiaB family, Radical SAM TherJR_3006 SM00876 Biotin and Thiamin Synthesis associated domain TherJR_3008 SM00470 ParB-like nuclease domain TherJR_3011 SM01228 TherJR_3011 TherJR_3013 SM00393 Putative single-stranded nucleic acids-binding domain TherJR_3013 SM01245 TherJR_3013 TherJR_3015 SM01234 TherJR_3015