locus-tag class description FA954_00010 PF01380 SIS domain FA954_00015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA954_00015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA954_00015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA954_00015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA954_00025 PF02457 DisA bacterial checkpoint controller nucleotide-binding FA954_00030 PF00491 Arginase family FA954_00145 PF03167 Uracil DNA glycosylase superfamily FA954_00165 PF01522 Polysaccharide deacetylase FA954_00180 PF10609 NUBPL iron-transfer P-loop NTPase FA954_00185 PF01520 N-acetylmuramoyl-L-alanine amidase FA954_00195 PF02535 ZIP Zinc transporter FA954_00205 PF00199 Catalase FA954_00205 PF06628 Catalase-related immune-responsive FA954_00220 PF00380 Ribosomal protein S9/S16 FA954_00225 PF00572 Ribosomal protein L13 FA954_00230 PF01416 tRNA pseudouridine synthase FA954_00235 PF02361 Cobalt transport protein FA954_00240 PF00005 ABC transporter FA954_00245 PF00005 ABC transporter FA954_00250 PF01196 Ribosomal protein L17 FA954_00255 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FA954_00255 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FA954_00255 PF01000 RNA polymerase Rpb3/RpoA insert domain FA954_00260 PF00411 Ribosomal protein S11 FA954_00265 PF00416 Ribosomal protein S13/S18 FA954_00270 PF00444 Ribosomal protein L36 FA954_00275 PF01176 Translation initiation factor 1A / IF-1 FA954_00285 PF00557 Metallopeptidase family M24 FA954_00290 PF05191 Adenylate kinase, active site lid FA954_00295 PF00344 SecY translocase FA954_00300 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FA954_00305 PF00327 Ribosomal protein L30p/L7e FA954_00310 PF03719 Ribosomal protein S5, C-terminal domain FA954_00310 PF00333 Ribosomal protein S5, N-terminal domain FA954_00315 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FA954_00320 PF00347 Ribosomal protein L6 FA954_00325 PF00410 Ribosomal protein S8 FA954_00330 PF00253 Ribosomal protein S14p/S29e FA954_00335 PF00281 Ribosomal protein L5 FA954_00335 PF00673 ribosomal L5P family C-terminus FA954_00340 PF00467 KOW motif FA954_00340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FA954_00345 PF00238 Ribosomal protein L14p/L23e FA954_00350 PF00366 Ribosomal protein S17 FA954_00355 PF00831 Ribosomal L29 protein FA954_00360 PF00252 Ribosomal protein L16p/L10e FA954_00365 PF07650 KH domain FA954_00365 PF00189 Ribosomal protein S3, C-terminal domain FA954_00370 PF00237 Ribosomal protein L22p/L17e FA954_00375 PF00203 Ribosomal protein S19 FA954_00380 PF03947 Ribosomal Proteins L2, C-terminal domain FA954_00380 PF00181 Ribosomal Proteins L2, RNA binding domain FA954_00385 PF00276 Ribosomal protein L23 FA954_00390 PF00573 Ribosomal protein L4/L1 family FA954_00395 PF00297 Ribosomal protein L3 FA954_00400 PF00338 Ribosomal protein S10p/S20e FA954_00405 PF01202 Shikimate kinase FA954_00410 PF01487 Type I 3-dehydroquinase FA954_00415 PF03143 Elongation factor Tu C-terminal domain FA954_00415 PF00009 Elongation factor Tu GTP binding domain FA954_00415 PF03144 Elongation factor Tu domain 2 FA954_00420 PF00679 Elongation factor G C-terminus FA954_00420 PF14492 Elongation Factor G, domain II FA954_00420 PF03764 Elongation factor G, domain IV FA954_00420 PF00009 Elongation factor Tu GTP binding domain FA954_00420 PF03144 Elongation factor Tu domain 2 FA954_00425 PF00177 Ribosomal protein S7p/S5e FA954_00430 PF00164 Ribosomal protein S12/S23 FA954_00435 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FA954_00440 PF00623 RNA polymerase Rpb1, domain 2 FA954_00440 PF04997 RNA polymerase Rpb1, domain 1 FA954_00440 PF05000 RNA polymerase Rpb1, domain 4 FA954_00440 PF04998 RNA polymerase Rpb1, domain 5 FA954_00440 PF04983 RNA polymerase Rpb1, domain 3 FA954_00445 PF04563 RNA polymerase beta subunit FA954_00445 PF04561 RNA polymerase Rpb2, domain 2 FA954_00445 PF10385 RNA polymerase beta subunit external 1 domain FA954_00445 PF04565 RNA polymerase Rpb2, domain 3 FA954_00445 PF04560 RNA polymerase Rpb2, domain 7 FA954_00445 PF00562 RNA polymerase Rpb2, domain 6 FA954_00450 PF05175 Methyltransferase small domain FA954_00455 PF00542 Ribosomal protein L7/L12 C-terminal domain FA954_00455 PF16320 Ribosomal protein L7/L12 dimerisation domain FA954_00460 PF00466 Ribosomal protein L10 FA954_00465 PF00687 Ribosomal protein L1p/L10e family FA954_00470 PF00298 Ribosomal protein L11, RNA binding domain FA954_00470 PF03946 Ribosomal protein L11, N-terminal domain FA954_00475 PF00467 KOW motif FA954_00475 PF02357 Transcription termination factor nusG FA954_00485 PF00471 Ribosomal protein L33 FA954_00490 PF08281 Sigma-70, region 4 FA954_00490 PF04542 Sigma-70 region 2 FA954_00500 PF00588 SpoU rRNA Methylase family FA954_00500 PF08032 RNA 2'-O ribose methyltransferase substrate binding FA954_00505 PF00636 Ribonuclease III domain FA954_00510 PF01406 tRNA synthetases class I (C) catalytic domain FA954_00510 PF09190 DALR domain FA954_00515 PF00132 Bacterial transferase hexapeptide (six repeats) FA954_00515 PF06426 Serine acetyltransferase, N-terminal FA954_00520 PF00749 tRNA synthetases class I (E and Q), catalytic domain FA954_00525 PF02542 YgbB family FA954_00530 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FA954_00540 PF02559 CarD-like/TRCF domain FA954_00550 PF01066 CDP-alcohol phosphatidyltransferase FA954_00555 PF02457 DisA bacterial checkpoint controller nucleotide-binding FA954_00555 PF10635 DisA bacterial checkpoint controller linker region FA954_00560 PF18073 Rubredoxin metal binding domain FA954_00565 PF02861 Clp amino terminal domain, pathogenicity island component FA954_00565 PF10431 C-terminal, D2-small domain, of ClpB protein FA954_00565 PF00004 ATPase family associated with various cellular activities (AAA) FA954_00565 PF07724 AAA domain (Cdc48 subfamily) FA954_00565 PF17871 AAA lid domain FA954_00570 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain FA954_00575 PF02151 UvrB/uvrC motif FA954_00580 PF05848 CtsR N-terminal HTH domain FA954_00580 PF17727 CtsR C-terminal dimerization domain FA954_00585 PF02308 MgtC family FA954_00590 PF13419 Haloacid dehalogenase-like hydrolase FA954_00595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_00595 PF07730 Histidine kinase FA954_00600 PF00072 Response regulator receiver domain FA954_00600 PF00196 Bacterial regulatory proteins, luxR family FA954_00640 PF00012 Hsp70 protein FA954_00650 PF00152 tRNA synthetases class II (D, K and N) FA954_00650 PF01336 OB-fold nucleic acid binding domain FA954_00655 PF01207 Dihydrouridine synthase (Dus) FA954_00660 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FA954_00665 PF02152 Dihydroneopterin aldolase FA954_00670 PF00809 Pterin binding enzyme FA954_00675 PF00291 Pyridoxal-phosphate dependent enzyme FA954_00680 PF01430 Hsp33 protein FA954_00685 PF03309 Type III pantothenate kinase FA954_00690 PF01434 Peptidase family M41 FA954_00690 PF06480 FtsH Extracellular FA954_00690 PF00004 ATPase family associated with various cellular activities (AAA) FA954_00690 PF17862 AAA+ lid domain FA954_00700 PF09179 TilS substrate binding domain FA954_00700 PF01171 PP-loop family FA954_00700 PF11734 TilS substrate C-terminal domain FA954_00705 PF07228 Stage II sporulation protein E (SpoIIE) FA954_00725 PF07075 Protein of unknown function (DUF1343) FA954_00740 PF07873 YabP family FA954_00745 PF01479 S4 domain FA954_00750 PF03819 MazG nucleotide pyrophosphohydrolase domain FA954_00750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA954_00755 PF14667 Polysaccharide biosynthesis C-terminal domain FA954_00755 PF01943 Polysaccharide biosynthesis protein FA954_00760 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FA954_00760 PF15714 Stage V sporulation protein T C-terminal, transcription factor FA954_00765 PF05698 Bacterial trigger factor protein (TF) C-terminus FA954_00770 PF17757 UvrB interaction domain FA954_00770 PF03461 TRCF domain FA954_00770 PF00271 Helicase conserved C-terminal domain FA954_00770 PF00270 DEAD/DEAH box helicase FA954_00770 PF02559 CarD-like/TRCF domain FA954_00775 PF10955 Protein of unknown function (DUF2757) FA954_00780 PF01195 Peptidyl-tRNA hydrolase FA954_00785 PF01386 Ribosomal L25p family FA954_00785 PF14693 Ribosomal protein TL5, C-terminal domain FA954_00790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FA954_00790 PF14572 Phosphoribosyl synthetase-associated domain FA954_00795 PF00483 Nucleotidyl transferase FA954_00795 PF00132 Bacterial transferase hexapeptide (six repeats) FA954_00800 PF04026 SpoVG FA954_00805 PF01042 Endoribonuclease L-PSP FA954_00810 PF09182 Bacterial purine repressor, N-terminal FA954_00810 PF00156 Phosphoribosyl transferase domain FA954_00815 PF08544 GHMP kinases C terminal FA954_00815 PF00288 GHMP kinases N terminal domain FA954_00820 PF00269 Small, acid-soluble spore proteins, alpha/beta type FA954_00825 PF06257 Biofilm formation stimulator VEG FA954_00835 PF00398 Ribosomal RNA adenine dimethylase FA954_00840 PF13331 Domain of unknown function (DUF4093) FA954_00840 PF13662 Toprim domain FA954_00845 PF01026 TatD related DNase FA954_00850 PF10502 Signal peptidase, peptidase S26 FA954_00855 PF08264 Anticodon-binding domain of tRNA FA954_00855 PF09334 tRNA synthetases class I (M) FA954_00855 PF01588 Putative tRNA binding domain FA954_00870 PF18277 AbrB C-terminal domain FA954_00870 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FA954_00875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA954_00875 PF00367 phosphotransferase system, EIIB FA954_00875 PF02378 Phosphotransferase system, EIIC FA954_00880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FA954_00885 PF01541 GIY-YIG catalytic domain FA954_00890 PF06156 Initiation control protein YabA FA954_00895 PF04468 PSP1 C-terminal conserved region FA954_00900 PF02223 Thymidylate kinase FA954_00905 PF01276 Orn/Lys/Arg decarboxylase, major domain FA954_00905 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FA954_00950 PF02575 YbaB/EbfC DNA-binding family FA954_00955 PF12169 DNA polymerase III subunits gamma and tau domain III FA954_00960 PF00989 PAS fold FA954_00960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_00960 PF00512 His Kinase A (phospho-acceptor) domain FA954_00970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA954_00970 PF00367 phosphotransferase system, EIIB FA954_00970 PF02378 Phosphotransferase system, EIIC FA954_00975 PF16657 Maltogenic Amylase, C-terminal domain FA954_00975 PF00128 Alpha amylase, catalytic domain FA954_00980 PF07702 UTRA domain FA954_00980 PF00392 Bacterial regulatory proteins, gntR family FA954_00985 PF03099 Biotin/lipoate A/B protein ligase family FA954_00995 PF03358 NADPH-dependent FMN reductase FA954_01000 PF07690 Major Facilitator Superfamily FA954_01010 PF13533 Biotin-lipoyl like FA954_01015 PF01047 MarR family FA954_01020 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA954_01020 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA954_01030 PF03009 Glycerophosphoryl diester phosphodiesterase family FA954_01035 PF02028 BCCT, betaine/carnitine/choline family transporter FA954_01060 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA954_01060 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA954_01065 PF00480 ROK family FA954_01070 PF01022 Bacterial regulatory protein, arsR family FA954_01080 PF07729 FCD domain FA954_01080 PF00392 Bacterial regulatory proteins, gntR family FA954_01085 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA954_01085 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA954_01090 PF02447 GntP family permease FA954_01095 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FA954_01095 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA954_01100 PF03747 ADP-ribosylglycohydrolase FA954_01130 PF14437 MafB19-like deaminase FA954_01135 PF01475 Ferric uptake regulator family FA954_01140 PF00950 ABC 3 transport family FA954_01145 PF00005 ABC transporter FA954_01155 PF05908 Poly-gamma-glutamate hydrolase FA954_01165 PF00440 Bacterial regulatory proteins, tetR family FA954_01165 PF08360 QacR-like protein, C-terminal region FA954_01170 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_01175 PF00210 Ferritin-like domain FA954_01185 PF07690 Major Facilitator Superfamily FA954_01190 PF13520 Amino acid permease FA954_01195 PF00733 Asparagine synthase FA954_01195 PF13537 Glutamine amidotransferase domain FA954_01205 PF00571 CBS domain FA954_01205 PF01595 Cyclin M transmembrane N-terminal domain FA954_01205 PF03471 Transporter associated domain FA954_01210 PF00486 Transcriptional regulatory protein, C terminal FA954_01210 PF00072 Response regulator receiver domain FA954_01215 PF00672 HAMP domain FA954_01215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_01215 PF00512 His Kinase A (phospho-acceptor) domain FA954_01230 PF02403 Seryl-tRNA synthetase N-terminal domain FA954_01230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA954_01235 PF01174 SNO glutamine amidotransferase family FA954_01240 PF01680 SOR/SNZ family FA954_01245 PF00768 D-alanyl-D-alanine carboxypeptidase FA954_01245 PF07943 Penicillin-binding protein 5, C-terminal domain FA954_01250 PF00571 CBS domain FA954_01250 PF00478 IMP dehydrogenase / GMP reductase domain FA954_01260 PF14175 YaaC-like Protein FA954_01265 PF00521 DNA gyrase/topoisomerase IV, subunit A FA954_01265 PF03989 DNA gyrase C-terminal domain, beta-propeller FA954_01270 PF00986 DNA gyrase B subunit, carboxyl terminus FA954_01270 PF01751 Toprim domain FA954_01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_01270 PF00204 DNA gyrase B FA954_01275 PF04025 Domain of unknown function (DUF370) FA954_01280 PF02463 RecF/RecN/SMC N terminal domain FA954_01290 PF02768 DNA polymerase III beta subunit, C-terminal domain FA954_01290 PF00712 DNA polymerase III beta subunit, N-terminal domain FA954_01290 PF02767 DNA polymerase III beta subunit, central domain FA954_01295 PF08299 Bacterial dnaA protein helix-turn-helix FA954_01295 PF11638 DnaA N-terminal domain FA954_01295 PF00308 Bacterial dnaA protein FA954_01300 PF00468 Ribosomal protein L34 FA954_01305 PF00825 Ribonuclease P FA954_01310 PF01809 Putative membrane protein insertion efficiency factor FA954_01315 PF02096 60Kd inner membrane protein FA954_01320 PF01424 R3H domain FA954_01320 PF14804 Jag N-terminus FA954_01325 PF12631 MnmE helical domain FA954_01325 PF10396 GTP-binding protein TrmE N-terminus FA954_01325 PF01926 50S ribosome-binding GTPase FA954_01330 PF13932 GidA associated domain FA954_01330 PF01134 Glucose inhibited division protein A FA954_01335 PF02527 rRNA small subunit methyltransferase G FA954_01350 PF17762 HTH domain found in ParB protein FA954_01350 PF02195 ParB-like nuclease domain FA954_01355 PF13614 AAA domain FA954_01360 PF02195 ParB-like nuclease domain FA954_01360 PF17762 HTH domain found in ParB protein FA954_01365 PF00266 Aminotransferase class-V FA954_01370 PF06866 Protein of unknown function (DUF1256) FA954_01375 PF06107 Bacterial protein of unknown function (DUF951) FA954_01380 PF06071 Protein of unknown function (DUF933) FA954_01380 PF01926 50S ribosome-binding GTPase FA954_01385 PF01250 Ribosomal protein S6 FA954_01390 PF00436 Single-strand binding protein family FA954_01395 PF01084 Ribosomal protein S18 FA954_01410 PF01368 DHH family FA954_01410 PF02272 DHHA1 domain FA954_01415 PF01281 Ribosomal protein L9, N-terminal domain FA954_01415 PF03948 Ribosomal protein L9, C-terminal domain FA954_01420 PF03796 DnaB-like helicase C terminal domain FA954_01420 PF00772 DnaB-like helicase N terminal domain FA954_01425 PF00709 Adenylosuccinate synthetase FA954_01435 PF02590 Predicted SPOUT methyltransferase FA954_01445 PF13180 PDZ domain FA954_01460 PF00753 Metallo-beta-lactamase superfamily FA954_01475 PF00512 His Kinase A (phospho-acceptor) domain FA954_01475 PF13426 PAS domain FA954_01475 PF00672 HAMP domain FA954_01475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_01480 PF00072 Response regulator receiver domain FA954_01480 PF00486 Transcriptional regulatory protein, C terminal FA954_01485 PF14398 YheC/D like ATP-grasp FA954_01495 PF00512 His Kinase A (phospho-acceptor) domain FA954_01495 PF00989 PAS fold FA954_01495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_01500 PF08741 YwhD family FA954_01510 PF00912 Transglycosylase FA954_01510 PF00905 Penicillin binding protein transpeptidase domain FA954_01515 PF17284 Spermidine synthase tetramerisation domain FA954_01520 PF00491 Arginase family FA954_01530 PF05746 DALR anticodon binding domain FA954_01530 PF00750 tRNA synthetases class I (R) FA954_01530 PF03485 Arginyl tRNA synthetase N terminal domain FA954_01535 PF03793 PASTA domain FA954_01535 PF00069 Protein kinase domain FA954_01540 PF13426 PAS domain FA954_01540 PF02954 Bacterial regulatory protein, Fis family FA954_01540 PF00158 Sigma-54 interaction domain FA954_01550 PF12544 Lysine-2,3-aminomutase FA954_01560 PF00488 MutS domain V FA954_01560 PF01713 Smr domain FA954_01565 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit FA954_01570 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase FA954_01570 PF02310 B12 binding domain FA954_01590 PF13183 4Fe-4S dicluster domain FA954_01590 PF02754 Cysteine-rich domain FA954_01595 PF00072 Response regulator receiver domain FA954_01595 PF00486 Transcriptional regulatory protein, C terminal FA954_01600 PF00672 HAMP domain FA954_01600 PF18698 Histidine kinase sensor domain FA954_01600 PF00512 His Kinase A (phospho-acceptor) domain FA954_01600 PF00989 PAS fold FA954_01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_01605 PF00108 Thiolase, N-terminal domain FA954_01605 PF02803 Thiolase, C-terminal domain FA954_01610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FA954_01610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FA954_01615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_01615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_01615 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_01620 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_01620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_01620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_01630 PF08359 YsiA-like protein, C-terminal region FA954_01630 PF00440 Bacterial regulatory proteins, tetR family FA954_01635 PF02310 B12 binding domain FA954_01635 PF01642 Methylmalonyl-CoA mutase FA954_01640 PF05066 HB1, ASXL, restriction endonuclease HTH domain FA954_01645 PF00117 Glutamine amidotransferase class-I FA954_01645 PF06418 CTP synthase N-terminus FA954_01650 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FA954_01660 PF02558 Ketopantoate reductase PanE/ApbA FA954_01660 PF08546 Ketopantoate reductase PanE/ApbA C terminal FA954_01670 PF00072 Response regulator receiver domain FA954_01675 PF03061 Thioesterase superfamily FA954_01680 PF05853 beta-keto acid cleavage enzyme FA954_01685 PF01116 Fructose-bisphosphate aldolase class-II FA954_01690 PF00923 Transaldolase/Fructose-6-phosphate aldolase FA954_01695 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FA954_01700 PF07497 Rho termination factor, RNA-binding domain FA954_01700 PF07498 Rho termination factor, N-terminal domain FA954_01700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA954_01705 PF01551 Peptidase family M23 FA954_01710 PF01197 Ribosomal protein L31 FA954_01715 PF00265 Thymidine kinase FA954_01725 PF03462 PCRF domain FA954_01725 PF00472 RF-1 domain FA954_01730 PF13847 Methyltransferase domain FA954_01730 PF17827 PrmC N-terminal domain FA954_01735 PF09551 Stage II sporulation protein R (spore_II_R) FA954_01745 PF01300 Telomere recombination FA954_01745 PF03481 Putative GTP-binding controlling metal-binding FA954_01750 PF00149 Calcineurin-like phosphoesterase FA954_01755 PF02659 Putative manganese efflux pump FA954_01760 PF01451 Low molecular weight phosphotyrosine protein phosphatase FA954_01765 PF02502 Ribose/Galactose Isomerase FA954_01770 PF04260 Protein of unknown function (DUF436) FA954_01775 PF00464 Serine hydroxymethyltransferase FA954_01795 PF00119 ATP synthase A chain FA954_01800 PF00137 ATP synthase subunit C FA954_01805 PF00430 ATP synthase B/B' CF(0) FA954_01810 PF00213 ATP synthase delta (OSCP) subunit FA954_01815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA954_01815 PF00306 ATP synthase alpha/beta chain, C terminal domain FA954_01815 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA954_01820 PF00231 ATP synthase FA954_01825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FA954_01825 PF02874 ATP synthase alpha/beta family, beta-barrel domain FA954_01835 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FA954_01840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FA954_01845 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FA954_01855 PF00146 NADH dehydrogenase FA954_01860 PF12838 4Fe-4S dicluster domain FA954_01865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FA954_01870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FA954_01875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FA954_01875 PF00361 Proton-conducting membrane transporter FA954_01875 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus FA954_01880 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FA954_01880 PF00361 Proton-conducting membrane transporter FA954_01885 PF00361 Proton-conducting membrane transporter FA954_01900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA954_01905 PF08486 Stage II sporulation protein FA954_01915 PF01551 Peptidase family M23 FA954_01920 PF12116 Stage III sporulation protein D FA954_01930 PF01066 CDP-alcohol phosphatidyltransferase FA954_01935 PF00390 Malic enzyme, N-terminal domain FA954_01935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA954_01935 PF03949 Malic enzyme, NAD binding domain FA954_01940 PF07977 FabA-like domain FA954_01945 PF13439 Glycosyltransferase Family 4 FA954_01945 PF00534 Glycosyl transferases group 1 FA954_01950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FA954_01950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA954_01955 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FA954_01960 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FA954_01960 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FA954_01960 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FA954_01980 PF13439 Glycosyltransferase Family 4 FA954_01980 PF00534 Glycosyl transferases group 1 FA954_01985 PF03816 Cell envelope-related transcriptional attenuator domain FA954_01990 PF16363 GDP-mannose 4,6 dehydratase FA954_01995 PF02397 Bacterial sugar transferase FA954_02000 PF00005 ABC transporter FA954_02000 PF09383 NIL domain FA954_02005 PF00528 Binding-protein-dependent transport system inner membrane component FA954_02010 PF03180 NLPA lipoprotein FA954_02015 PF09186 Domain of unknown function (DUF1949) FA954_02015 PF01205 Uncharacterized protein family UPF0029 FA954_02020 PF03816 Cell envelope-related transcriptional attenuator domain FA954_02025 PF00082 Subtilase family FA954_02030 PF02773 S-adenosylmethionine synthetase, C-terminal domain FA954_02030 PF02772 S-adenosylmethionine synthetase, central domain FA954_02030 PF00438 S-adenosylmethionine synthetase, N-terminal domain FA954_02035 PF00196 Bacterial regulatory proteins, luxR family FA954_02035 PF00072 Response regulator receiver domain FA954_02045 PF00271 Helicase conserved C-terminal domain FA954_02045 PF04851 Type III restriction enzyme, res subunit FA954_02055 PF00216 Bacterial DNA-binding protein FA954_02060 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA954_02065 PF00528 Binding-protein-dependent transport system inner membrane component FA954_02070 PF00005 ABC transporter FA954_02075 PF00313 'Cold-shock' DNA-binding domain FA954_02080 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FA954_02080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FA954_02085 PF02350 UDP-N-acetylglucosamine 2-epimerase FA954_02095 PF02810 SEC-C motif FA954_02095 PF07517 SecA DEAD-like domain FA954_02095 PF01043 SecA preprotein cross-linking domain FA954_02095 PF07516 SecA Wing and Scaffold domain FA954_02105 PF00378 Enoyl-CoA hydratase/isomerase FA954_02115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FA954_02120 PF02774 Semialdehyde dehydrogenase, dimerisation domain FA954_02120 PF01118 Semialdehyde dehydrogenase, NAD binding domain FA954_02125 PF01960 ArgJ family FA954_02130 PF00696 Amino acid kinase family FA954_02135 PF00202 Aminotransferase class-III FA954_02140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA954_02140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA954_02160 PF03741 Integral membrane protein TerC family FA954_02180 PF00764 Arginosuccinate synthase FA954_02185 PF00206 Lyase FA954_02185 PF14698 Argininosuccinate lyase C-terminal FA954_02190 PF00005 ABC transporter FA954_02195 PF02687 FtsX-like permease family FA954_02195 PF18075 FtsX extracellular domain FA954_02200 PF01551 Peptidase family M23 FA954_02205 PF01551 Peptidase family M23 FA954_02215 PF01471 Putative peptidoglycan binding domain FA954_02215 PF03572 Peptidase family S41 FA954_02215 PF17820 PDZ domain FA954_02220 PF17820 PDZ domain FA954_02225 PF02151 UvrB/uvrC motif FA954_02225 PF04851 Type III restriction enzyme, res subunit FA954_02225 PF12344 Ultra-violet resistance protein B FA954_02225 PF00271 Helicase conserved C-terminal domain FA954_02225 PF17757 UvrB interaction domain FA954_02230 PF17755 UvrA DNA-binding domain FA954_02230 PF00005 ABC transporter FA954_02230 PF17760 UvrA interaction domain FA954_02235 PF00269 Small, acid-soluble spore proteins, alpha/beta type FA954_02250 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV FA954_02255 PF01931 Protein of unknown function DUF84 FA954_02260 PF04203 Sortase domain FA954_02265 PF07475 HPr Serine kinase C-terminal domain FA954_02265 PF02603 HPr Serine kinase N terminus FA954_02270 PF00860 Permease family FA954_02280 PF01790 Prolipoprotein diacylglyceryl transferase FA954_02285 PF13419 Haloacid dehalogenase-like hydrolase FA954_02290 PF14602 Hexapeptide repeat of succinyl-transferase FA954_02295 PF00873 AcrB/AcrD/AcrF family FA954_02305 PF01510 N-acetylmuramoyl-L-alanine amidase FA954_02315 PF01180 Dihydroorotate dehydrogenase FA954_02325 PF01725 Ham1 family FA954_02330 PF13393 Histidyl-tRNA synthetase FA954_02335 PF01634 ATP phosphoribosyltransferase FA954_02340 PF00815 Histidinol dehydrogenase FA954_02345 PF00475 Imidazoleglycerol-phosphate dehydratase FA954_02350 PF00117 Glutamine amidotransferase class-I FA954_02355 PF00977 Histidine biosynthesis protein FA954_02360 PF00977 Histidine biosynthesis protein FA954_02365 PF01502 Phosphoribosyl-AMP cyclohydrolase FA954_02365 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FA954_02375 PF00085 Thioredoxin FA954_02380 PF00480 ROK family FA954_02385 PF03668 P-loop ATPase protein family FA954_02390 PF01933 Uncharacterised protein family UPF0052 FA954_02395 PF10298 WhiA N-terminal LAGLIDADG-like domain FA954_02395 PF14527 WhiA LAGLIDADG-like domain FA954_02395 PF02650 WhiA C-terminal HTH domain FA954_02400 PF00381 PTS HPr component phosphorylation site FA954_02415 PF00574 Clp protease FA954_02420 PF02633 Creatinine amidohydrolase FA954_02430 PF04552 Sigma-54, DNA binding domain FA954_02430 PF04963 Sigma-54 factor, core binding domain FA954_02430 PF00309 Sigma-54 factor, Activator interacting domain (AID) FA954_02435 PF04198 Putative sugar-binding domain FA954_02440 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FA954_02440 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FA954_02445 PF00162 Phosphoglycerate kinase FA954_02450 PF00121 Triosephosphate isomerase FA954_02455 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FA954_02455 PF01676 Metalloenzyme superfamily FA954_02460 PF03952 Enolase, N-terminal domain FA954_02460 PF00113 Enolase, C-terminal TIM barrel domain FA954_02465 PF03840 Preprotein translocase SecG subunit FA954_02480 PF12146 Serine aminopeptidase, S33 FA954_02485 PF00773 RNB domain FA954_02485 PF17876 Cold shock domain FA954_02485 PF00575 S1 RNA binding domain FA954_02485 PF08206 Ribonuclease B OB domain FA954_02490 PF01668 SmpB protein FA954_02505 PF13087 AAA domain FA954_02505 PF13091 PLD-like domain FA954_02525 PF02441 Flavoprotein FA954_02530 PF03006 Haemolysin-III related FA954_02535 PF00501 AMP-binding enzyme FA954_02535 PF13193 AMP-binding enzyme C-terminal domain FA954_02545 PF00817 impB/mucB/samB family FA954_02545 PF11799 impB/mucB/samB family C-terminal domain FA954_02545 PF11798 IMS family HHH motif FA954_02555 PF00056 lactate/malate dehydrogenase, NAD binding domain FA954_02555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA954_02560 PF02652 L-lactate permease FA954_02565 PF04343 Protein of unknown function, DUF488 FA954_02570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA954_02570 PF00874 PRD domain FA954_02570 PF05043 Mga helix-turn-helix domain FA954_02570 PF08279 HTH domain FA954_02580 PF03611 PTS system sugar-specific permease component FA954_02590 PF01580 FtsK/SpoIIIE family FA954_02590 PF12538 DNA transporter FA954_02605 PF00202 Aminotransferase class-III FA954_02625 PF00975 Thioesterase domain FA954_02630 PF01648 4'-phosphopantetheinyl transferase superfamily FA954_02640 PF00999 Sodium/hydrogen exchanger family FA954_02645 PF04341 Protein of unknown function, DUF485 FA954_02650 PF00474 Sodium:solute symporter family FA954_02675 PF02923 Restriction endonuclease BamHI FA954_02695 PF01048 Phosphorylase superfamily FA954_02700 PF02621 Menaquinone biosynthesis FA954_02710 PF12671 Putative amidase domain FA954_02720 PF02589 LUD domain FA954_02725 PF02589 LUD domain FA954_02725 PF13183 4Fe-4S dicluster domain FA954_02725 PF11870 Domain of unknown function (DUF3390) FA954_02730 PF02754 Cysteine-rich domain FA954_02735 PF07729 FCD domain FA954_02735 PF00392 Bacterial regulatory proteins, gntR family FA954_02745 PF00248 Aldo/keto reductase family FA954_02750 PF01053 Cys/Met metabolism PLP-dependent enzyme FA954_02755 PF02954 Bacterial regulatory protein, Fis family FA954_02755 PF13426 PAS domain FA954_02755 PF00158 Sigma-54 interaction domain FA954_02760 PF03033 Glycosyltransferase family 28 N-terminal domain FA954_02760 PF04101 Glycosyltransferase family 28 C-terminal domain FA954_02765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA954_02765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA954_02770 PF00294 pfkB family carbohydrate kinase FA954_02775 PF00455 DeoR C terminal sensor domain FA954_02775 PF08220 DeoR-like helix-turn-helix domain FA954_02785 PF00809 Pterin binding enzyme FA954_02785 PF02310 B12 binding domain FA954_02785 PF02965 Vitamin B12 dependent methionine synthase, activation domain FA954_02785 PF02574 Homocysteine S-methyltransferase FA954_02785 PF02607 B12 binding domain FA954_02790 PF02219 Methylenetetrahydrofolate reductase FA954_02790 PF02574 Homocysteine S-methyltransferase FA954_02800 PF02401 LytB protein FA954_02830 PF02675 S-adenosylmethionine decarboxylase FA954_02835 PF00391 PEP-utilising enzyme, mobile domain FA954_02835 PF05524 PEP-utilising enzyme, N-terminal FA954_02835 PF02896 PEP-utilising enzyme, TIM barrel domain FA954_02840 PF00381 PTS HPr component phosphorylation site FA954_02845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA954_02850 PF00158 Sigma-54 interaction domain FA954_02850 PF03610 PTS system fructose IIA component FA954_02850 PF00874 PRD domain FA954_02855 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FA954_02860 PF06968 Biotin and Thiamin Synthesis associated domain FA954_02860 PF04055 Radical SAM superfamily FA954_02865 PF07070 SpoOM protein FA954_02880 PF00378 Enoyl-CoA hydratase/isomerase FA954_02880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FA954_02880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FA954_02885 PF00108 Thiolase, N-terminal domain FA954_02885 PF02803 Thiolase, C-terminal domain FA954_02890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_02890 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_02890 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_02910 PF02416 mttA/Hcf106 family FA954_02920 PF13722 5TM C-terminal transporter carbon starvation CstA FA954_02920 PF02554 Carbon starvation protein CstA FA954_02925 PF02686 Glu-tRNAGln amidotransferase C subunit FA954_02930 PF01425 Amidase FA954_02935 PF02637 GatB domain FA954_02935 PF02934 GatB/GatE catalytic domain FA954_02950 PF03698 Uncharacterised protein family (UPF0180) FA954_02960 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FA954_02960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA954_02965 PF00860 Permease family FA954_02970 PF00781 Diacylglycerol kinase catalytic domain FA954_02975 PF05958 tRNA (Uracil-5-)-methyltransferase FA954_02975 PF01938 TRAM domain FA954_02985 PF12146 Serine aminopeptidase, S33 FA954_02995 PF07690 Major Facilitator Superfamily FA954_03000 PF08386 TAP-like protein FA954_03000 PF00561 alpha/beta hydrolase fold FA954_03005 PF13192 Thioredoxin domain FA954_03005 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_03010 PF00578 AhpC/TSA family FA954_03015 PF07739 TipAS antibiotic-recognition domain FA954_03015 PF13411 MerR HTH family regulatory protein FA954_03020 PF06445 GyrI-like small molecule binding domain FA954_03020 PF12833 Helix-turn-helix domain FA954_03025 PF00440 Bacterial regulatory proteins, tetR family FA954_03025 PF02909 Tetracyclin repressor-like, C-terminal domain FA954_03030 PF01209 ubiE/COQ5 methyltransferase family FA954_03045 PF04634 Protein of unknown function, DUF600 FA954_03050 PF04740 LXG domain of WXG superfamily FA954_03055 PF12804 MobA-like NTP transferase domain FA954_03060 PF00892 EamA-like transporter family FA954_03070 PF04991 LicD family FA954_03080 PF00245 Alkaline phosphatase FA954_03085 PF02645 Uncharacterised protein, DegV family COG1307 FA954_03095 PF00005 ABC transporter FA954_03100 PF01497 Periplasmic binding protein FA954_03105 PF01032 FecCD transport family FA954_03110 PF01032 FecCD transport family FA954_03120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FA954_03120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FA954_03120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FA954_03120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FA954_03125 PF01266 FAD dependent oxidoreductase FA954_03135 PF08281 Sigma-70, region 4 FA954_03135 PF04542 Sigma-70 region 2 FA954_03140 PF00881 Nitroreductase family FA954_03145 PF01520 N-acetylmuramoyl-L-alanine amidase FA954_03150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FA954_03160 PF03788 LrgA family FA954_03165 PF04172 LrgB-like family FA954_03170 PF07690 Major Facilitator Superfamily FA954_03175 PF03466 LysR substrate binding domain FA954_03175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FA954_03180 PF17479 Protein of unknown function (DUF3048) C-terminal domain FA954_03180 PF11258 Protein of unknown function (DUF3048) N-terminal domain FA954_03185 PF01371 Trp repressor protein FA954_03195 PF00580 UvrD/REP helicase N-terminal domain FA954_03195 PF13361 UvrD-like helicase C-terminal domain FA954_03200 PF00533 BRCA1 C Terminus (BRCT) domain FA954_03200 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FA954_03200 PF03120 NAD-dependent DNA ligase OB-fold domain FA954_03200 PF01653 NAD-dependent DNA ligase adenylation domain FA954_03200 PF12826 Helix-hairpin-helix motif FA954_03205 PF13559 Domain of unknown function (DUF4129) FA954_03205 PF01841 Transglutaminase-like superfamily FA954_03205 PF11992 Domain of unknown function (DUF3488) FA954_03210 PF00005 ABC transporter FA954_03215 PF00528 Binding-protein-dependent transport system inner membrane component FA954_03220 PF01910 Thiamine-binding protein FA954_03225 PF09084 NMT1/THI5 like FA954_03230 PF00849 RNA pseudouridylate synthase FA954_03245 PF00905 Penicillin binding protein transpeptidase domain FA954_03245 PF00912 Transglycosylase FA954_03255 PF02660 Glycerol-3-phosphate acyltransferase FA954_03275 PF02583 Metal-sensitive transcriptional repressor FA954_03285 PF01497 Periplasmic binding protein FA954_03290 PF01032 FecCD transport family FA954_03295 PF00005 ABC transporter FA954_03300 PF01923 Cobalamin adenosyltransferase FA954_03305 PF03960 ArsC family FA954_03310 PF00578 AhpC/TSA family FA954_03315 PF01597 Glycine cleavage H-protein FA954_03325 PF00485 Phosphoribulokinase / Uridine kinase family FA954_03330 PF01293 Phosphoenolpyruvate carboxykinase FA954_03335 PF00575 S1 RNA binding domain FA954_03335 PF02401 LytB protein FA954_03340 PF06962 Putative rRNA methylase FA954_03345 PF04055 Radical SAM superfamily FA954_03345 PF16199 Radical_SAM C-terminal domain FA954_03355 PF01595 Cyclin M transmembrane N-terminal domain FA954_03355 PF00571 CBS domain FA954_03355 PF03471 Transporter associated domain FA954_03360 PF00676 Dehydrogenase E1 component FA954_03365 PF02780 Transketolase, C-terminal domain FA954_03365 PF02779 Transketolase, pyrimidine binding domain FA954_03370 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FA954_03370 PF00364 Biotin-requiring enzyme FA954_03370 PF02817 e3 binding domain FA954_03375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA954_03375 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_03390 PF06569 Protein of unknown function (DUF1128) FA954_03410 PF17392 Urocanase C-terminal domain FA954_03410 PF17391 Urocanase N-terminal domain FA954_03410 PF01175 Urocanase Rossmann-like domain FA954_03415 PF01979 Amidohydrolase family FA954_03420 PF00491 Arginase family FA954_03425 PF08534 Redoxin FA954_03430 PF02834 LigT like Phosphoesterase FA954_03435 PF13667 ThiC-associated domain FA954_03435 PF01964 Radical SAM ThiC family FA954_03440 PF00005 ABC transporter FA954_03445 PF00575 S1 RNA binding domain FA954_03445 PF03725 3' exoribonuclease family, domain 2 FA954_03445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FA954_03445 PF01138 3' exoribonuclease family, domain 1 FA954_03445 PF00013 KH domain FA954_03455 PF00694 Aconitase C-terminal domain FA954_03455 PF00330 Aconitase family (aconitate hydratase) FA954_03460 PF09339 IclR helix-turn-helix domain FA954_03460 PF01614 Bacterial transcriptional regulator FA954_03465 PF00455 DeoR C terminal sensor domain FA954_03465 PF08220 DeoR-like helix-turn-helix domain FA954_03470 PF04055 Radical SAM superfamily FA954_03475 PF06508 Queuosine biosynthesis protein QueC FA954_03485 PF14489 QueF-like protein FA954_03490 PF06491 Disulphide isomerase FA954_03500 PF01032 FecCD transport family FA954_03505 PF01032 FecCD transport family FA954_03510 PF00005 ABC transporter FA954_03515 PF01497 Periplasmic binding protein FA954_03530 PF13193 AMP-binding enzyme C-terminal domain FA954_03530 PF00501 AMP-binding enzyme FA954_03530 PF16177 Acetyl-coenzyme A synthetase N-terminus FA954_03545 PF18277 AbrB C-terminal domain FA954_03545 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FA954_03550 PF00378 Enoyl-CoA hydratase/isomerase FA954_03555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA954_03555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA954_03560 PF00676 Dehydrogenase E1 component FA954_03565 PF02779 Transketolase, pyrimidine binding domain FA954_03565 PF02780 Transketolase, C-terminal domain FA954_03570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FA954_03570 PF02817 e3 binding domain FA954_03570 PF00364 Biotin-requiring enzyme FA954_03575 PF01654 Cytochrome bd terminal oxidase subunit I FA954_03580 PF02322 Cytochrome bd terminal oxidase subunit II FA954_03600 PF00375 Sodium:dicarboxylate symporter family FA954_03645 PF02615 Malate/L-lactate dehydrogenase FA954_03720 PF02386 Cation transport protein FA954_03735 PF01865 Protein of unknown function DUF47 FA954_03740 PF01384 Phosphate transporter family FA954_03745 PF01546 Peptidase family M20/M25/M40 FA954_03755 PF00266 Aminotransferase class-V FA954_03760 PF02910 Fumarate reductase flavoprotein C-term FA954_03760 PF00890 FAD binding domain FA954_03765 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FA954_03765 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FA954_03770 PF02445 Quinolinate synthetase A protein FA954_03775 PF01476 LysM domain FA954_03775 PF03734 L,D-transpeptidase catalytic domain FA954_03780 PF03734 L,D-transpeptidase catalytic domain FA954_03785 PF13419 Haloacid dehalogenase-like hydrolase FA954_03790 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FA954_03790 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FA954_03795 PF07486 Cell Wall Hydrolase FA954_03795 PF01471 Putative peptidoglycan binding domain FA954_03800 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FA954_03800 PF04101 Glycosyltransferase family 28 C-terminal domain FA954_03805 PF01557 Fumarylacetoacetate (FAA) hydrolase family FA954_03810 PF00742 Homoserine dehydrogenase FA954_03810 PF03447 Homoserine dehydrogenase, NAD binding domain FA954_03810 PF01842 ACT domain FA954_03815 PF01381 Helix-turn-helix FA954_03820 PF07670 Nucleoside recognition FA954_03825 PF08863 YolD-like protein FA954_03830 PF11799 impB/mucB/samB family C-terminal domain FA954_03830 PF00817 impB/mucB/samB family FA954_03835 PF07969 Amidohydrolase family FA954_03840 PF01619 Proline dehydrogenase FA954_03845 PF00171 Aldehyde dehydrogenase family FA954_03855 PF03600 Citrate transporter FA954_03875 PF00171 Aldehyde dehydrogenase family FA954_03880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA954_03890 PF07486 Cell Wall Hydrolase FA954_03900 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ FA954_03905 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FA954_03905 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FA954_03915 PF01507 Phosphoadenosine phosphosulfate reductase family FA954_03920 PF14306 PUA-like domain FA954_03920 PF01747 ATP-sulfurylase FA954_03925 PF01925 Sulfite exporter TauE/SafE FA954_03930 PF13180 PDZ domain FA954_03935 PF02632 BioY family FA954_03950 PF00694 Aconitase C-terminal domain FA954_03955 PF00330 Aconitase family (aconitate hydratase) FA954_03965 PF00155 Aminotransferase class I and II FA954_03975 PF02654 Cobalamin-5-phosphate synthase FA954_03980 PF00300 Histidine phosphatase superfamily (branch 1) FA954_03990 PF03186 CobD/Cbib protein FA954_04000 PF13380 CoA binding domain FA954_04040 PF00180 Isocitrate/isopropylmalate dehydrogenase FA954_04045 PF00933 Glycosyl hydrolase family 3 N terminal domain FA954_04045 PF01915 Glycosyl hydrolase family 3 C-terminal domain FA954_04065 PF00793 DAHP synthetase I family FA954_04065 PF01817 Chorismate mutase type II FA954_04075 PF00356 Bacterial regulatory proteins, lacI family FA954_04080 PF01048 Phosphorylase superfamily FA954_04085 PF07561 Domain of Unknown Function (DUF1540) FA954_04090 PF00501 AMP-binding enzyme FA954_04090 PF13193 AMP-binding enzyme C-terminal domain FA954_04095 PF00905 Penicillin binding protein transpeptidase domain FA954_04095 PF00912 Transglycosylase FA954_04100 PF00912 Transglycosylase FA954_04100 PF00905 Penicillin binding protein transpeptidase domain FA954_04105 PF00579 tRNA synthetases class I (W and Y) FA954_04105 PF01479 S4 domain FA954_04115 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FA954_04115 PF00391 PEP-utilising enzyme, mobile domain FA954_04120 PF00163 Ribosomal protein S4/S9 N-terminal domain FA954_04120 PF01479 S4 domain FA954_04125 PF02390 Putative methyltransferase FA954_04140 PF00300 Histidine phosphatase superfamily (branch 1) FA954_04170 PF00293 NUDIX domain FA954_04170 PF13344 Haloacid dehalogenase-like hydrolase FA954_04180 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA954_04185 PF00528 Binding-protein-dependent transport system inner membrane component FA954_04190 PF00005 ABC transporter FA954_04195 PF13185 GAF domain FA954_04200 PF02073 Thermophilic metalloprotease (M29) FA954_04205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA954_04210 PF05343 M42 glutamyl aminopeptidase FA954_04225 PF04960 Glutaminase FA954_04230 PF07408 Protein of unknown function (DUF1507) FA954_04235 PF01699 Sodium/calcium exchanger protein FA954_04245 PF03780 Asp23 family, cell envelope-related function FA954_04255 PF01546 Peptidase family M20/M25/M40 FA954_04255 PF07687 Peptidase dimerisation domain FA954_04260 PF00571 CBS domain FA954_04265 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FA954_04270 PF07451 Stage V sporulation protein AD (SpoVAD) FA954_04295 PF00571 CBS domain FA954_04295 PF01769 Divalent cation transporter FA954_04295 PF03448 MgtE intracellular N domain FA954_04315 PF06133 Control of competence regulator ComK, YlbF/YmcA FA954_04320 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) FA954_04325 PF07690 Major Facilitator Superfamily FA954_04325 PF00083 Sugar (and other) transporter FA954_04335 PF06803 Protein of unknown function (DUF1232) FA954_04340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA954_04365 PF03553 Na+/H+ antiporter family FA954_04380 PF03061 Thioesterase superfamily FA954_04385 PF00378 Enoyl-CoA hydratase/isomerase FA954_04395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FA954_04395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FA954_04395 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FA954_04400 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FA954_04400 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FA954_04405 PF00108 Thiolase, N-terminal domain FA954_04405 PF02803 Thiolase, C-terminal domain FA954_04415 PF05138 Phenylacetic acid catabolic protein FA954_04430 PF01883 Iron-sulfur cluster assembly protein FA954_04435 PF00171 Aldehyde dehydrogenase family FA954_04440 PF03060 Nitronate monooxygenase FA954_04445 PF04072 Leucine carboxyl methyltransferase FA954_04450 PF13302 Acetyltransferase (GNAT) domain FA954_04470 PF05067 Manganese containing catalase FA954_04485 PF00269 Small, acid-soluble spore proteins, alpha/beta type FA954_04490 PF00501 AMP-binding enzyme FA954_04490 PF13193 AMP-binding enzyme C-terminal domain FA954_04505 PF00082 Subtilase family FA954_04510 PF00905 Penicillin binding protein transpeptidase domain FA954_04510 PF03717 Penicillin-binding Protein dimerisation domain FA954_04520 PF02666 Phosphatidylserine decarboxylase FA954_04525 PF01694 Rhomboid family FA954_04530 PF07690 Major Facilitator Superfamily FA954_04540 PF00171 Aldehyde dehydrogenase family FA954_04545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FA954_04545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FA954_04550 PF01425 Amidase FA954_04555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA954_04555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA954_04575 PF13291 ACT domain FA954_04575 PF04607 Region found in RelA / SpoT proteins FA954_04575 PF02824 TGS domain FA954_04580 PF02580 D-Tyr-tRNA(Tyr) deacylase FA954_04585 PF02780 Transketolase, C-terminal domain FA954_04585 PF02779 Transketolase, pyrimidine binding domain FA954_04585 PF00456 Transketolase, thiamine diphosphate binding domain FA954_04590 PF04241 Protein of unknown function (DUF423) FA954_04595 PF03129 Anticodon binding domain FA954_04595 PF13393 Histidyl-tRNA synthetase FA954_04600 PF02938 GAD domain FA954_04600 PF00152 tRNA synthetases class II (D, K and N) FA954_04600 PF01336 OB-fold nucleic acid binding domain FA954_04610 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) FA954_04615 PF07875 Coat F domain FA954_04630 PF16193 AAA C-terminal domain FA954_04630 PF00004 ATPase family associated with various cellular activities (AAA) FA954_04630 PF12002 MgsA AAA+ ATPase C terminal FA954_04635 PF02082 Transcriptional regulator FA954_04640 PF00266 Aminotransferase class-V FA954_04650 PF14490 Helix-hairpin-helix containing domain FA954_04650 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FA954_04650 PF13538 UvrD-like helicase C-terminal domain FA954_04670 PF01594 AI-2E family transporter FA954_04675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA954_04675 PF01411 tRNA synthetases class II (A) FA954_04675 PF02272 DHHA1 domain FA954_04680 PF06135 IreB regulatory phosphoprotein FA954_04685 PF03652 Holliday junction resolvase FA954_04690 PF06949 Protein of unknown function (DUF1292) FA954_04695 PF06949 Protein of unknown function (DUF1292) FA954_04700 PF02618 YceG-like family FA954_04705 PF03717 Penicillin-binding Protein dimerisation domain FA954_04705 PF00905 Penicillin binding protein transpeptidase domain FA954_04720 PF02028 BCCT, betaine/carnitine/choline family transporter FA954_04725 PF01566 Natural resistance-associated macrophage protein FA954_04730 PF00551 Formyl transferase FA954_04730 PF01842 ACT domain FA954_04735 PF02080 TrkA-C domain FA954_04735 PF00999 Sodium/hydrogen exchanger family FA954_04735 PF02254 TrkA-N domain FA954_04740 PF13538 UvrD-like helicase C-terminal domain FA954_04745 PF00356 Bacterial regulatory proteins, lacI family FA954_04750 PF00294 pfkB family carbohydrate kinase FA954_04755 PF05025 RbsD / FucU transport protein family FA954_04760 PF00005 ABC transporter FA954_04765 PF02653 Branched-chain amino acid transport system / permease component FA954_04770 PF13407 Periplasmic binding protein domain FA954_04775 PF03358 NADPH-dependent FMN reductase FA954_04780 PF01687 Riboflavin kinase FA954_04785 PF00296 Luciferase-like monooxygenase FA954_04790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_04790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_04790 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_04800 PF04542 Sigma-70 region 2 FA954_04800 PF04545 Sigma-70, region 4 FA954_04815 PF10502 Signal peptidase, peptidase S26 FA954_04850 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FA954_04860 PF02698 DUF218 domain FA954_04870 PF01654 Cytochrome bd terminal oxidase subunit I FA954_04875 PF02322 Cytochrome bd terminal oxidase subunit II FA954_04880 PF00005 ABC transporter FA954_04880 PF00664 ABC transporter transmembrane region FA954_04885 PF00005 ABC transporter FA954_04885 PF00664 ABC transporter transmembrane region FA954_04895 PF03591 AzlC protein FA954_04905 PF00854 POT family FA954_04920 PF00578 AhpC/TSA family FA954_04925 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FA954_04930 PF00115 Cytochrome C and Quinol oxidase polypeptide I FA954_04935 PF00510 Cytochrome c oxidase subunit III FA954_04940 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FA954_04945 PF00248 Aldo/keto reductase family FA954_04950 PF01026 TatD related DNase FA954_04955 PF00795 Carbon-nitrogen hydrolase FA954_04960 PF00155 Aminotransferase class I and II FA954_04970 PF01321 Creatinase/Prolidase N-terminal domain FA954_04970 PF00557 Metallopeptidase family M24 FA954_04975 PF02566 OsmC-like protein FA954_04985 PF07690 Major Facilitator Superfamily FA954_05000 PF01926 50S ribosome-binding GTPase FA954_05005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FA954_05005 PF01488 Shikimate / quinate 5-dehydrogenase FA954_05005 PF08501 Shikimate dehydrogenase substrate binding domain FA954_05010 PF01467 Cytidylyltransferase-like FA954_05015 PF01966 HD domain FA954_05025 PF09334 tRNA synthetases class I (M) FA954_05025 PF08264 Anticodon-binding domain of tRNA FA954_05025 PF00133 tRNA synthetases class I (I, L, M and V) FA954_05025 PF13603 Leucyl-tRNA synthetase, Domain 2 FA954_05030 PF10531 SLBB domain FA954_05035 PF01053 Cys/Met metabolism PLP-dependent enzyme FA954_05040 PF01053 Cys/Met metabolism PLP-dependent enzyme FA954_05045 PF00692 dUTPase FA954_05055 PF03772 Competence protein FA954_05055 PF00753 Metallo-beta-lactamase superfamily FA954_05055 PF13567 Domain of unknown function (DUF4131) FA954_05060 PF08281 Sigma-70, region 4 FA954_05060 PF04542 Sigma-70 region 2 FA954_05070 PF06144 DNA polymerase III, delta subunit FA954_05080 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_05080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FA954_05085 PF07301 Protein of unknown function (DUF1453) FA954_05090 PF00579 tRNA synthetases class I (W and Y) FA954_05095 PF01649 Ribosomal protein S20 FA954_05105 PF07454 Stage II sporulation protein P (SpoIIP) FA954_05115 PF00009 Elongation factor Tu GTP binding domain FA954_05115 PF00679 Elongation factor G C-terminus FA954_05115 PF06421 GTP-binding protein LepA C-terminus FA954_05115 PF03144 Elongation factor Tu domain 2 FA954_05120 PF06969 HemN C-terminal domain FA954_05120 PF04055 Radical SAM superfamily FA954_05125 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FA954_05125 PF01628 HrcA protein C terminal domain FA954_05130 PF00118 TCP-1/cpn60 chaperonin family FA954_05135 PF01025 GrpE FA954_05140 PF00012 Hsp70 protein FA954_05145 PF00684 DnaJ central domain FA954_05145 PF01556 DnaJ C terminal domain FA954_05145 PF00226 DnaJ domain FA954_05155 PF04452 RNA methyltransferase FA954_05160 PF00919 Uncharacterized protein family UPF0004 FA954_05160 PF04055 Radical SAM superfamily FA954_05160 PF01938 TRAM domain FA954_05165 PF00293 NUDIX domain FA954_05170 PF02690 Na+/Pi-cotransporter FA954_05180 PF01230 HIT domain FA954_05190 PF09424 Yqey-like protein FA954_05195 PF01972 Serine dehydrogenase proteinase FA954_05195 PF01957 NfeD-like C-terminal, partner-binding FA954_05200 PF12127 SigmaW regulon antibacterial FA954_05210 PF00269 Small, acid-soluble spore proteins, alpha/beta type FA954_05220 PF06898 Putative stage IV sporulation protein YqfD FA954_05225 PF02562 PhoH-like protein FA954_05230 PF07698 7TM receptor with intracellular HD hydrolase FA954_05230 PF07697 7TM-HD extracellular FA954_05230 PF01966 HD domain FA954_05235 PF02130 Uncharacterized protein family UPF0054 FA954_05240 PF01219 Prokaryotic diacylglycerol kinase FA954_05245 PF07650 KH domain FA954_05245 PF01926 50S ribosome-binding GTPase FA954_05255 PF02565 Recombination protein O C terminal FA954_05255 PF11967 Recombination protein O N terminal FA954_05260 PF02091 Glycyl-tRNA synthetase alpha subunit FA954_05265 PF05746 DALR anticodon binding domain FA954_05265 PF02092 Glycyl-tRNA synthetase beta subunit FA954_05275 PF00571 CBS domain FA954_05275 PF08279 HTH domain FA954_05280 PF03618 Kinase/pyrophosphorylase FA954_05285 PF00391 PEP-utilising enzyme, mobile domain FA954_05285 PF02896 PEP-utilising enzyme, TIM barrel domain FA954_05285 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FA954_05290 PF08275 DNA primase catalytic core, N-terminal domain FA954_05290 PF10410 DnaB-helicase binding domain of primase FA954_05290 PF01807 CHC2 zinc finger FA954_05295 PF03979 Sigma-70 factor, region 1.1 FA954_05295 PF00140 Sigma-70 factor, region 1.2 FA954_05295 PF04542 Sigma-70 region 2 FA954_05295 PF04539 Sigma-70 region 3 FA954_05295 PF04545 Sigma-70, region 4 FA954_05300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_05300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_05300 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_05305 PF00501 AMP-binding enzyme FA954_05305 PF13193 AMP-binding enzyme C-terminal domain FA954_05315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA954_05325 PF04816 tRNA (adenine(22)-N(1))-methyltransferase FA954_05330 PF01784 NIF3 (NGG1p interacting factor 3) FA954_05345 PF05343 M42 glutamyl aminopeptidase FA954_05350 PF09335 SNARE associated Golgi protein FA954_05355 PF00583 Acetyltransferase (GNAT) family FA954_05360 PF02581 Thiamine monophosphate synthase FA954_05365 PF01266 FAD dependent oxidoreductase FA954_05375 PF05690 Thiazole biosynthesis protein ThiG FA954_05380 PF01098 Cell cycle protein FA954_05385 PF01098 Cell cycle protein FA954_05395 PF00999 Sodium/hydrogen exchanger family FA954_05400 PF04298 Putative neutral zinc metallopeptidase FA954_05410 PF05103 DivIVA protein FA954_05415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA954_05440 PF00484 Carbonic anhydrase FA954_05445 PF01625 Peptide methionine sulfoxide reductase FA954_05455 PF00266 Aminotransferase class-V FA954_05460 PF02926 THUMP domain FA954_05460 PF02568 Thiamine biosynthesis protein (ThiI) FA954_05465 PF01546 Peptidase family M20/M25/M40 FA954_05470 PF03741 Integral membrane protein TerC family FA954_05480 PF00437 Type II/IV secretion system protein FA954_05485 PF00482 Type II secretion system (T2SS), protein F FA954_05490 PF07963 Prokaryotic N-terminal methylation motif FA954_05520 PF04551 GcpE protein FA954_05525 PF04070 Domain of unknown function (DUF378) FA954_05530 PF07722 Peptidase C26 FA954_05540 PF04294 VanW like protein FA954_05545 PF03990 G5-linked-Ubiquitin-like domain FA954_05545 PF07501 G5 domain FA954_05545 PF06725 3D domain FA954_05565 PF02811 PHP domain FA954_05570 PF13673 Acetyltransferase (GNAT) domain FA954_05615 PF11599 RRNA methyltransferase AviRa FA954_05620 PF00082 Subtilase family FA954_05625 PF04198 Putative sugar-binding domain FA954_05630 PF02885 Glycosyl transferase family, helical bundle domain FA954_05630 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FA954_05630 PF00591 Glycosyl transferase family, a/b domain FA954_05635 PF01791 DeoC/LacD family aldolase FA954_05640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FA954_05650 PF05684 Protein of unknown function (DUF819) FA954_05655 PF02646 RmuC family FA954_05665 PF01569 PAP2 superfamily FA954_05690 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FA954_05690 PF01276 Orn/Lys/Arg decarboxylase, major domain FA954_05695 PF06335 Protein of unknown function (DUF1054) FA954_05705 PF00883 Cytosol aminopeptidase family, catalytic domain FA954_05705 PF02789 Cytosol aminopeptidase family, N-terminal domain FA954_05710 PF03009 Glycerophosphoryl diester phosphodiesterase family FA954_05715 PF01261 Xylose isomerase-like TIM barrel FA954_05720 PF14036 YlaH-like protein FA954_05735 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FA954_05740 PF00753 Metallo-beta-lactamase superfamily FA954_05745 PF00578 AhpC/TSA family FA954_05750 PF02683 Cytochrome C biogenesis protein transmembrane region FA954_05755 PF00578 AhpC/TSA family FA954_05760 PF00581 Rhodanese-like domain FA954_05765 PF00291 Pyridoxal-phosphate dependent enzyme FA954_05785 PF00378 Enoyl-CoA hydratase/isomerase FA954_05795 PF00583 Acetyltransferase (GNAT) family FA954_05800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA954_05800 PF02785 Biotin carboxylase C-terminal domain FA954_05800 PF00289 Biotin carboxylase, N-terminal domain FA954_05805 PF00364 Biotin-requiring enzyme FA954_05810 PF00682 HMGL-like FA954_05815 PF00378 Enoyl-CoA hydratase/isomerase FA954_05820 PF01039 Carboxyl transferase domain FA954_05825 PF08546 Ketopantoate reductase PanE/ApbA C terminal FA954_05825 PF02558 Ketopantoate reductase PanE/ApbA FA954_05835 PF10079 Bacillithiol biosynthesis BshC FA954_05840 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FA954_05840 PF05221 S-adenosyl-L-homocysteine hydrolase FA954_05845 PF02381 MraZ protein, putative antitoxin-like FA954_05850 PF01795 MraW methylase family FA954_05860 PF03793 PASTA domain FA954_05860 PF03717 Penicillin-binding Protein dimerisation domain FA954_05860 PF00905 Penicillin binding protein transpeptidase domain FA954_05865 PF00905 Penicillin binding protein transpeptidase domain FA954_05865 PF03717 Penicillin-binding Protein dimerisation domain FA954_05865 PF03793 PASTA domain FA954_05870 PF01225 Mur ligase family, catalytic domain FA954_05870 PF08245 Mur ligase middle domain FA954_05870 PF02875 Mur ligase family, glutamate ligase domain FA954_05875 PF08245 Mur ligase middle domain FA954_05875 PF01225 Mur ligase family, catalytic domain FA954_05875 PF02875 Mur ligase family, glutamate ligase domain FA954_05880 PF00953 Glycosyl transferase family 4 FA954_05880 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FA954_05885 PF08245 Mur ligase middle domain FA954_05885 PF02875 Mur ligase family, glutamate ligase domain FA954_05890 PF01098 Cell cycle protein FA954_05895 PF03033 Glycosyltransferase family 28 N-terminal domain FA954_05895 PF04101 Glycosyltransferase family 28 C-terminal domain FA954_05900 PF01565 FAD binding domain FA954_05900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FA954_05905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA954_05915 PF02491 SHS2 domain inserted in FTSA FA954_05920 PF00091 Tubulin/FtsZ family, GTPase domain FA954_05920 PF12327 FtsZ family, C-terminal domain FA954_05925 PF03419 Sporulation factor SpoIIGA FA954_05930 PF04545 Sigma-70, region 4 FA954_05930 PF04542 Sigma-70 region 2 FA954_05935 PF04539 Sigma-70 region 3 FA954_05935 PF04545 Sigma-70, region 4 FA954_05935 PF04542 Sigma-70 region 2 FA954_05940 PF05239 PRC-barrel domain FA954_05950 PF01168 Alanine racemase, N-terminal domain FA954_05955 PF04472 Cell division protein SepF FA954_05965 PF17774 Putative RNA-binding domain in YlmH FA954_05965 PF01479 S4 domain FA954_05970 PF05103 DivIVA protein FA954_05975 PF00133 tRNA synthetases class I (I, L, M and V) FA954_05975 PF08264 Anticodon-binding domain of tRNA FA954_05980 PF00324 Amino acid permease FA954_05985 PF01258 Prokaryotic dksA/traR C4-type zinc finger FA954_05990 PF01252 Signal peptidase (SPase) II FA954_05995 PF01479 S4 domain FA954_05995 PF00849 RNA pseudouridylate synthase FA954_06000 PF00156 Phosphoribosyl transferase domain FA954_06005 PF00860 Permease family FA954_06010 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FA954_06010 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FA954_06015 PF01979 Amidohydrolase family FA954_06020 PF00117 Glutamine amidotransferase class-I FA954_06020 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FA954_06025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FA954_06025 PF02142 MGS-like domain FA954_06025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA954_06030 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FA954_06035 PF00156 Phosphoribosyl transferase domain FA954_06045 PF00690 Cation transporter/ATPase, N-terminus FA954_06045 PF00689 Cation transporting ATPase, C-terminus FA954_06065 PF05343 M42 glutamyl aminopeptidase FA954_06070 PF13520 Amino acid permease FA954_06075 PF14667 Polysaccharide biosynthesis C-terminal domain FA954_06075 PF01943 Polysaccharide biosynthesis protein FA954_06080 PF03755 YicC-like family, N-terminal region FA954_06080 PF08340 Domain of unknown function (DUF1732) FA954_06085 PF04025 Domain of unknown function (DUF370) FA954_06090 PF00625 Guanylate kinase FA954_06095 PF01192 RNA polymerase Rpb6 FA954_06100 PF02441 Flavoprotein FA954_06100 PF04127 DNA / pantothenate metabolism flavoprotein FA954_06105 PF17764 3′ DNA-binding domain (3′BD) FA954_06105 PF04851 Type III restriction enzyme, res subunit FA954_06105 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FA954_06105 PF18074 Primosomal protein N C-terminal domain FA954_06105 PF00271 Helicase conserved C-terminal domain FA954_06110 PF01327 Polypeptide deformylase FA954_06115 PF00551 Formyl transferase FA954_06115 PF02911 Formyl transferase, C-terminal domain FA954_06120 PF01029 NusB family FA954_06120 PF01189 16S rRNA methyltransferase RsmB/F FA954_06125 PF03323 Bacillus/Clostridium GerA spore germination protein FA954_06130 PF03845 Spore germination protein FA954_06140 PF04055 Radical SAM superfamily FA954_06150 PF00069 Protein kinase domain FA954_06150 PF03793 PASTA domain FA954_06155 PF03193 RsgA GTPase FA954_06155 PF16745 RsgA N-terminal domain FA954_06160 PF00834 Ribulose-phosphate 3 epimerase family FA954_06165 PF09515 Thiamine transporter protein (Thia_YuaJ) FA954_06175 PF08183 Stage V sporulation protein family FA954_06180 PF00830 Ribosomal L28 family FA954_06185 PF03780 Asp23 family, cell envelope-related function FA954_06190 PF13684 Dihydroxyacetone kinase family FA954_06190 PF02734 DAK2 domain FA954_06195 PF02645 Uncharacterised protein, DegV family COG1307 FA954_06200 PF01842 ACT domain FA954_06200 PF03315 Serine dehydratase beta chain FA954_06205 PF03313 Serine dehydratase alpha chain FA954_06210 PF17191 RecG wedge domain FA954_06210 PF00271 Helicase conserved C-terminal domain FA954_06210 PF00270 DEAD/DEAH box helicase FA954_06230 PF01467 Cytidylyltransferase-like FA954_06235 PF07670 Nucleoside recognition FA954_06240 PF01734 Patatin-like phospholipase FA954_06245 PF13180 PDZ domain FA954_06245 PF05362 Lon protease (S16) C-terminal proteolytic domain FA954_06250 PF02620 Large ribosomal RNA subunit accumulation protein YceD FA954_06255 PF01783 Ribosomal L32p protein family FA954_06265 PF02504 Fatty acid synthesis protein FA954_06270 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FA954_06270 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FA954_06275 PF00698 Acyl transferase domain FA954_06285 PF00550 Phosphopantetheine attachment site FA954_06290 PF00109 Beta-ketoacyl synthase, N-terminal domain FA954_06290 PF02801 Beta-ketoacyl synthase, C-terminal domain FA954_06295 PF14622 Ribonuclease-III-like FA954_06295 PF00035 Double-stranded RNA binding motif FA954_06315 PF06470 SMC proteins Flexible Hinge Domain FA954_06315 PF02463 RecF/RecN/SMC N terminal domain FA954_06320 PF02881 SRP54-type protein, helical bundle domain FA954_06320 PF00448 SRP54-type protein, GTPase domain FA954_06325 PF04297 Putative helix-turn-helix protein, YlxM / p13 like FA954_06330 PF00448 SRP54-type protein, GTPase domain FA954_06330 PF02978 Signal peptide binding domain FA954_06330 PF02881 SRP54-type protein, helical bundle domain FA954_06335 PF00886 Ribosomal protein S16 FA954_06345 PF05239 PRC-barrel domain FA954_06345 PF01782 RimM N-terminal domain FA954_06350 PF01746 tRNA (Guanine-1)-methyltransferase FA954_06355 PF01245 Ribosomal protein L19 FA954_06360 PF10502 Signal peptidase, peptidase S26 FA954_06365 PF01926 50S ribosome-binding GTPase FA954_06370 PF01351 Ribonuclease HII FA954_06375 PF02021 Uncharacterised protein family UPF0102 FA954_06380 PF00291 Pyridoxal-phosphate dependent enzyme FA954_06380 PF00585 C-terminal regulatory domain of Threonine dehydratase FA954_06390 PF13335 Magnesium chelatase, subunit ChlI C-terminal FA954_06390 PF01078 Magnesium chelatase, subunit ChlI FA954_06405 PF05105 Bacteriophage holin family FA954_06410 PF01520 N-acetylmuramoyl-L-alanine amidase FA954_06410 PF05036 Sporulation related domain FA954_06435 PF00145 C-5 cytosine-specific DNA methylase FA954_06435 PF18284 DNA methylase N-terminal domain FA954_06440 PF09019 EcoRII C terminal FA954_06440 PF09217 Restriction endonuclease EcoRII, N-terminal FA954_06445 PF01078 Magnesium chelatase, subunit ChlI FA954_06445 PF13335 Magnesium chelatase, subunit ChlI C-terminal FA954_06470 PF00565 Staphylococcal nuclease homologue FA954_06480 PF01520 N-acetylmuramoyl-L-alanine amidase FA954_06480 PF05036 Sporulation related domain FA954_06485 PF00375 Sodium:dicarboxylate symporter family FA954_06490 PF00268 Ribonucleotide reductase, small chain FA954_06495 PF00465 Iron-containing alcohol dehydrogenase FA954_06500 PF02436 Conserved carboxylase domain FA954_06500 PF00682 HMGL-like FA954_06500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA954_06500 PF00364 Biotin-requiring enzyme FA954_06500 PF00289 Biotin carboxylase, N-terminal domain FA954_06500 PF02785 Biotin carboxylase C-terminal domain FA954_06505 PF00696 Amino acid kinase family FA954_06505 PF01472 PUA domain FA954_06510 PF00171 Aldehyde dehydrogenase family FA954_06520 PF00324 Amino acid permease FA954_06530 PF00534 Glycosyl transferases group 1 FA954_06530 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FA954_06540 PF04055 Radical SAM superfamily FA954_06580 PF08442 ATP-grasp domain FA954_06580 PF00549 CoA-ligase FA954_06585 PF02629 CoA binding domain FA954_06585 PF00549 CoA-ligase FA954_06590 PF02481 DNA recombination-mediator protein A FA954_06590 PF17782 DprA winged helix domain FA954_06595 PF01131 DNA topoisomerase FA954_06595 PF01396 Topoisomerase DNA binding C4 zinc finger FA954_06595 PF01751 Toprim domain FA954_06600 PF01134 Glucose inhibited division protein A FA954_06605 PF00227 Proteasome subunit FA954_06610 PF10431 C-terminal, D2-small domain, of ClpB protein FA954_06610 PF07724 AAA domain (Cdc48 subfamily) FA954_06610 PF00004 ATPase family associated with various cellular activities (AAA) FA954_06615 PF00318 Ribosomal protein S2 FA954_06620 PF00889 Elongation factor TS FA954_06625 PF00696 Amino acid kinase family FA954_06630 PF01765 Ribosome recycling factor FA954_06635 PF01255 Putative undecaprenyl diphosphate synthase FA954_06645 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FA954_06645 PF13288 DXP reductoisomerase C-terminal domain FA954_06645 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FA954_06650 PF02163 Peptidase family M50 FA954_06650 PF17820 PDZ domain FA954_06655 PF04073 Aminoacyl-tRNA editing domain FA954_06655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA954_06655 PF03129 Anticodon binding domain FA954_06670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA954_06670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA954_06675 PF07478 D-ala D-ala ligase C-terminus FA954_06675 PF01820 D-ala D-ala ligase N-terminus FA954_06680 PF01427 D-ala-D-ala dipeptidase FA954_06690 PF00512 His Kinase A (phospho-acceptor) domain FA954_06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_06695 PF04892 VanZ like family FA954_06700 PF00005 ABC transporter FA954_06700 PF00571 CBS domain FA954_06705 PF00528 Binding-protein-dependent transport system inner membrane component FA954_06710 PF02378 Phosphotransferase system, EIIC FA954_06715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA954_06720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FA954_06730 PF04309 Glycerol-3-phosphate responsive antiterminator FA954_06735 PF00230 Major intrinsic protein FA954_06740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FA954_06740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FA954_06745 PF01266 FAD dependent oxidoreductase FA954_06745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FA954_06755 PF01641 SelR domain FA954_06760 PF01432 Peptidase family M3 FA954_06760 PF08439 Oligopeptidase F FA954_06765 PF00011 Hsp20/alpha crystallin family FA954_06775 PF01645 Conserved region in glutamate synthase FA954_06780 PF17384 RimP C-terminal SH3 domain FA954_06780 PF02576 RimP N-terminal domain FA954_06785 PF08529 NusA N-terminal domain FA954_06785 PF00575 S1 RNA binding domain FA954_06785 PF13184 NusA-like KH domain FA954_06790 PF04296 Protein of unknown function (DUF448) FA954_06795 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FA954_06800 PF00009 Elongation factor Tu GTP binding domain FA954_06800 PF04760 Translation initiation factor IF-2, N-terminal region FA954_06800 PF11987 Translation-initiation factor 2 FA954_06810 PF02033 Ribosome-binding factor A FA954_06815 PF02272 DHHA1 domain FA954_06815 PF01368 DHH family FA954_06820 PF16198 tRNA pseudouridylate synthase B C-terminal domain FA954_06820 PF01509 TruB family pseudouridylate synthase (N terminal domain) FA954_06825 PF01687 Riboflavin kinase FA954_06825 PF06574 FAD synthetase FA954_06830 PF00312 Ribosomal protein S15 FA954_06835 PF00575 S1 RNA binding domain FA954_06835 PF03725 3' exoribonuclease family, domain 2 FA954_06835 PF01138 3' exoribonuclease family, domain 1 FA954_06835 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FA954_06835 PF00013 KH domain FA954_06840 PF01522 Polysaccharide deacetylase FA954_06845 PF05193 Peptidase M16 inactive domain FA954_06845 PF00675 Insulinase (Peptidase family M16) FA954_06850 PF00692 dUTPase FA954_06865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FA954_06865 PF16924 Dipicolinate synthase subunit A N-terminal domain FA954_06870 PF02441 Flavoprotein FA954_06875 PF01118 Semialdehyde dehydrogenase, NAD binding domain FA954_06875 PF02774 Semialdehyde dehydrogenase, dimerisation domain FA954_06880 PF00696 Amino acid kinase family FA954_06880 PF13840 ACT domain FA954_06885 PF00701 Dihydrodipicolinate synthetase family FA954_06890 PF17770 Ribonuclease J C-terminal domain FA954_06890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FA954_06890 PF00753 Metallo-beta-lactamase superfamily FA954_06900 PF01183 Glycosyl hydrolases family 25 FA954_06910 PF00893 Small Multidrug Resistance protein FA954_06915 PF00550 Phosphopantetheine attachment site FA954_06915 PF00668 Condensation domain FA954_06915 PF00501 AMP-binding enzyme FA954_06915 PF00975 Thioesterase domain FA954_06915 PF13193 AMP-binding enzyme C-terminal domain FA954_06920 PF00550 Phosphopantetheine attachment site FA954_06920 PF00668 Condensation domain FA954_06920 PF13193 AMP-binding enzyme C-terminal domain FA954_06920 PF00501 AMP-binding enzyme FA954_06930 PF02733 Dak1 domain FA954_06935 PF02734 DAK2 domain FA954_06940 PF03610 PTS system fructose IIA component FA954_06945 PF00574 Clp protease FA954_06955 PF01580 FtsK/SpoIIIE family FA954_06955 PF09397 Ftsk gamma domain FA954_06955 PF17854 FtsK alpha domain FA954_06960 PF05193 Peptidase M16 inactive domain FA954_06965 PF05193 Peptidase M16 inactive domain FA954_06965 PF00675 Insulinase (Peptidase family M16) FA954_06975 PF11588 Protein of unknown function (DUF3243) FA954_06980 PF11868 Protein of unknown function (DUF3388) FA954_06985 PF13464 Domain of unknown function (DUF4115) FA954_06995 PF13464 Domain of unknown function (DUF4115) FA954_07000 PF13464 Domain of unknown function (DUF4115) FA954_07005 PF01066 CDP-alcohol phosphatidyltransferase FA954_07010 PF00994 Probable molybdopterin binding domain FA954_07010 PF02464 Competence-damaged protein FA954_07010 PF18146 Damage-inducible protein CinA KH domain FA954_07015 PF00271 Helicase conserved C-terminal domain FA954_07015 PF00270 DEAD/DEAH box helicase FA954_07020 PF01883 Iron-sulfur cluster assembly protein FA954_07025 PF00154 recA bacterial DNA recombination protein FA954_07030 PF02631 RecX family FA954_07055 PF01966 HD domain FA954_07055 PF00013 KH domain FA954_07055 PF12072 Domain of unknown function (DUF3552) FA954_07060 PF13277 YmdB-like protein FA954_07065 PF04232 Stage V sporulation protein S (SpoVS) FA954_07070 PF01244 Membrane dipeptidase (Peptidase family M19) FA954_07075 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FA954_07075 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FA954_07075 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FA954_07080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA954_07085 PF12706 Beta-lactamase superfamily domain FA954_07090 PF00156 Phosphoribosyl transferase domain FA954_07095 PF01938 TRAM domain FA954_07095 PF04055 Radical SAM superfamily FA954_07095 PF00919 Uncharacterized protein family UPF0004 FA954_07100 PF06133 Control of competence regulator ComK, YlbF/YmcA FA954_07105 PF10628 Outer spore coat protein E (CotE) FA954_07115 PF05190 MutS family domain IV FA954_07115 PF05188 MutS domain II FA954_07115 PF00488 MutS domain V FA954_07115 PF05192 MutS domain III FA954_07115 PF01624 MutS domain I FA954_07120 PF01348 Type II intron maturase FA954_07120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FA954_07125 PF05190 MutS family domain IV FA954_07125 PF01624 MutS domain I FA954_07125 PF05192 MutS domain III FA954_07125 PF00488 MutS domain V FA954_07130 PF01119 DNA mismatch repair protein, C-terminal domain FA954_07130 PF08676 MutL C terminal dimerisation domain FA954_07135 PF04445 Putative SAM-dependent methyltransferase FA954_07145 PF17209 Hfq protein FA954_07150 PF00004 ATPase family associated with various cellular activities (AAA) FA954_07150 PF17866 AAA lid domain FA954_07155 PF13167 GTP-binding GTPase N-terminal FA954_07155 PF16360 GTP-binding GTPase Middle Region FA954_07155 PF01926 50S ribosome-binding GTPase FA954_07160 PF06838 Methionine gamma-lyase FA954_07170 PF13411 MerR HTH family regulatory protein FA954_07175 PF00120 Glutamine synthetase, catalytic domain FA954_07175 PF03951 Glutamine synthetase, beta-Grasp domain FA954_07185 PF01380 SIS domain FA954_07185 PF01418 Helix-turn-helix domain, rpiR family FA954_07190 PF02378 Phosphotransferase system, EIIC FA954_07190 PF00367 phosphotransferase system, EIIB FA954_07195 PF11975 Family 4 glycosyl hydrolase C-terminal domain FA954_07195 PF02056 Family 4 glycosyl hydrolase FA954_07210 PF00325 Bacterial regulatory proteins, crp family FA954_07210 PF00027 Cyclic nucleotide-binding domain FA954_07215 PF00970 Oxidoreductase FAD-binding domain FA954_07215 PF00042 Globin FA954_07215 PF00175 Oxidoreductase NAD-binding domain FA954_07220 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FA954_07225 PF00115 Cytochrome C and Quinol oxidase polypeptide I FA954_07230 PF00510 Cytochrome c oxidase subunit III FA954_07235 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FA954_07240 PF01040 UbiA prenyltransferase family FA954_07245 PF02628 Cytochrome oxidase assembly protein FA954_07250 PF07883 Cupin domain FA954_07255 PF01209 ubiE/COQ5 methyltransferase family FA954_07260 PF13186 Iron-sulfur cluster-binding domain FA954_07260 PF04055 Radical SAM superfamily FA954_07265 PF07732 Multicopper oxidase FA954_07270 PF01883 Iron-sulfur cluster assembly protein FA954_07295 PF00115 Cytochrome C and Quinol oxidase polypeptide I FA954_07300 PF01208 Uroporphyrinogen decarboxylase (URO-D) FA954_07320 PF00302 Chloramphenicol acetyltransferase FA954_07325 PF05163 DinB family FA954_07335 PF00152 tRNA synthetases class II (D, K and N) FA954_07335 PF01336 OB-fold nucleic acid binding domain FA954_07340 PF07261 Replication initiation and membrane attachment FA954_07345 PF01380 SIS domain FA954_07350 PF01418 Helix-turn-helix domain, rpiR family FA954_07350 PF01380 SIS domain FA954_07355 PF00367 phosphotransferase system, EIIB FA954_07355 PF02378 Phosphotransferase system, EIIC FA954_07360 PF04239 Protein of unknown function (DUF421) FA954_07365 PF00465 Iron-containing alcohol dehydrogenase FA954_07370 PF05525 Branched-chain amino acid transport protein FA954_07375 PF01225 Mur ligase family, catalytic domain FA954_07375 PF08245 Mur ligase middle domain FA954_07375 PF02875 Mur ligase family, glutamate ligase domain FA954_07380 PF07690 Major Facilitator Superfamily FA954_07390 PF01476 LysM domain FA954_07390 PF00704 Glycosyl hydrolases family 18 FA954_07395 PF00403 Heavy-metal-associated domain FA954_07400 PF00403 Heavy-metal-associated domain FA954_07405 PF00378 Enoyl-CoA hydratase/isomerase FA954_07410 PF00781 Diacylglycerol kinase catalytic domain FA954_07415 PF00106 short chain dehydrogenase FA954_07425 PF01557 Fumarylacetoacetate (FAA) hydrolase family FA954_07445 PF00465 Iron-containing alcohol dehydrogenase FA954_07455 PF01048 Phosphorylase superfamily FA954_07460 PF00881 Nitroreductase family FA954_07465 PF00583 Acetyltransferase (GNAT) family FA954_07490 PF07670 Nucleoside recognition FA954_07490 PF07664 Ferrous iron transport protein B C terminus FA954_07490 PF02421 Ferrous iron transport protein B FA954_07490 PF17910 FeoB cytosolic helical domain FA954_07495 PF07664 Ferrous iron transport protein B C terminus FA954_07495 PF17910 FeoB cytosolic helical domain FA954_07495 PF02421 Ferrous iron transport protein B FA954_07495 PF07670 Nucleoside recognition FA954_07505 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) FA954_07545 PF13649 Methyltransferase domain FA954_07560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA954_07600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FA954_07620 PF00080 Copper/zinc superoxide dismutase (SODC) FA954_07635 PF02678 Pirin FA954_07635 PF17954 Quercetinase C-terminal cupin domain FA954_07640 PF03358 NADPH-dependent FMN reductase FA954_07645 PF00293 NUDIX domain FA954_07665 PF00583 Acetyltransferase (GNAT) family FA954_07680 PF00440 Bacterial regulatory proteins, tetR family FA954_07695 PF00135 Carboxylesterase family FA954_07710 PF00005 ABC transporter FA954_07715 PF00392 Bacterial regulatory proteins, gntR family FA954_07730 PF00005 ABC transporter FA954_07750 PF00398 Ribosomal RNA adenine dimethylase FA954_07755 PF01810 LysE type translocator FA954_07795 PF12833 Helix-turn-helix domain FA954_07795 PF02311 AraC-like ligand binding domain FA954_07800 PF13537 Glutamine amidotransferase domain FA954_07800 PF00733 Asparagine synthase FA954_07805 PF13171 Protein of unknown function (DUF4004) FA954_07820 PF00565 Staphylococcal nuclease homologue FA954_07845 PF13411 MerR HTH family regulatory protein FA954_07845 PF07739 TipAS antibiotic-recognition domain FA954_07850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FA954_07850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FA954_07855 PF16916 Dimerisation domain of Zinc Transporter FA954_07855 PF01545 Cation efflux family FA954_07870 PF00892 EamA-like transporter family FA954_07875 PF05979 Bacterial protein of unknown function (DUF896) FA954_07880 PF00239 Resolvase, N terminal domain FA954_07885 PF05343 M42 glutamyl aminopeptidase FA954_07900 PF00067 Cytochrome P450 FA954_07905 PF02016 LD-carboxypeptidase N-terminal domain FA954_07905 PF17676 LD-carboxypeptidase C-terminal domain FA954_07910 PF00797 N-acetyltransferase FA954_07915 PF00107 Zinc-binding dehydrogenase FA954_07920 PF08000 Bacterial PH domain FA954_07920 PF11724 YvbH-like oligomerisation region FA954_07940 PF01925 Sulfite exporter TauE/SafE FA954_07950 PF00355 Rieske [2Fe-2S] domain FA954_07955 PF16916 Dimerisation domain of Zinc Transporter FA954_07955 PF01545 Cation efflux family FA954_07970 PF07690 Major Facilitator Superfamily FA954_07980 PF09370 Phosphoenolpyruvate hydrolase-like FA954_08005 PF00378 Enoyl-CoA hydratase/isomerase FA954_08010 PF00108 Thiolase, N-terminal domain FA954_08010 PF02803 Thiolase, C-terminal domain FA954_08020 PF00501 AMP-binding enzyme FA954_08030 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_08030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_08030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_08040 PF00860 Permease family FA954_08045 PF00589 Phage integrase family FA954_08045 PF02899 Phage integrase, N-terminal SAM-like domain FA954_08050 PF01726 LexA DNA binding domain FA954_08050 PF00717 Peptidase S24-like FA954_08055 PF00155 Aminotransferase class I and II FA954_08060 PF00871 Acetokinase family FA954_08065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FA954_08065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FA954_08070 PF17862 AAA+ lid domain FA954_08070 PF06480 FtsH Extracellular FA954_08070 PF00004 ATPase family associated with various cellular activities (AAA) FA954_08070 PF01434 Peptidase family M41 FA954_08090 PF01979 Amidohydrolase family FA954_08105 PF04679 ATP dependent DNA ligase C terminal region FA954_08105 PF04675 DNA ligase N terminus FA954_08105 PF01068 ATP dependent DNA ligase domain FA954_08110 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FA954_08115 PF01979 Amidohydrolase family FA954_08120 PF07690 Major Facilitator Superfamily FA954_08125 PF13520 Amino acid permease FA954_08135 PF00268 Ribonucleotide reductase, small chain FA954_08140 PF00317 Ribonucleotide reductase, all-alpha domain FA954_08140 PF03477 ATP cone domain FA954_08140 PF02867 Ribonucleotide reductase, barrel domain FA954_08155 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_08160 PF01323 DSBA-like thioredoxin domain FA954_08165 PF01479 S4 domain FA954_08165 PF00849 RNA pseudouridylate synthase FA954_08170 PF00324 Amino acid permease FA954_08185 PF04143 Sulphur transport FA954_08200 PF02735 Ku70/Ku80 beta-barrel domain FA954_08210 PF02261 Aspartate decarboxylase FA954_08215 PF02569 Pantoate-beta-alanine ligase FA954_08220 PF02548 Ketopantoate hydroxymethyltransferase FA954_08225 PF01773 Na+ dependent nucleoside transporter N-terminus FA954_08225 PF07662 Na+ dependent nucleoside transporter C-terminus FA954_08260 PF03099 Biotin/lipoate A/B protein ligase family FA954_08260 PF02237 Biotin protein ligase C terminal domain FA954_08260 PF08279 HTH domain FA954_08265 PF12627 Probable RNA and SrmB- binding site of polymerase A FA954_08265 PF01743 Poly A polymerase head domain FA954_08265 PF13735 tRNA nucleotidyltransferase domain 2 putative FA954_08270 PF13439 Glycosyltransferase Family 4 FA954_08270 PF00534 Glycosyl transferases group 1 FA954_08275 PF02585 GlcNAc-PI de-N-acetylase FA954_08280 PF00291 Pyridoxal-phosphate dependent enzyme FA954_08285 PF01113 Dihydrodipicolinate reductase, N-terminus FA954_08285 PF05173 Dihydrodipicolinate reductase, C-terminus FA954_08290 PF03819 MazG nucleotide pyrophosphohydrolase domain FA954_08295 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA954_08295 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA954_08300 PF01420 Type I restriction modification DNA specificity domain FA954_08305 PF02384 N-6 DNA Methylase FA954_08310 PF04851 Type III restriction enzyme, res subunit FA954_08310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FA954_08310 PF00271 Helicase conserved C-terminal domain FA954_08310 PF08463 EcoEI R protein C-terminal FA954_08320 PF07187 Protein of unknown function (DUF1405) FA954_08325 PF00032 Cytochrome b(C-terminal)/b6/petD FA954_08325 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FA954_08330 PF00033 Cytochrome b/b6/petB FA954_08335 PF00355 Rieske [2Fe-2S] domain FA954_08345 PF08858 IDEAL domain FA954_08345 PF08864 UPF0302 domain FA954_08360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FA954_08365 PF02153 Prephenate dehydrogenase FA954_08365 PF01842 ACT domain FA954_08370 PF00155 Aminotransferase class I and II FA954_08375 PF00290 Tryptophan synthase alpha chain FA954_08380 PF00291 Pyridoxal-phosphate dependent enzyme FA954_08385 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FA954_08390 PF00218 Indole-3-glycerol phosphate synthase FA954_08395 PF02885 Glycosyl transferase family, helical bundle domain FA954_08395 PF00591 Glycosyl transferase family, a/b domain FA954_08405 PF01761 3-dehydroquinate synthase FA954_08410 PF01264 Chorismate synthase FA954_08415 PF00334 Nucleoside diphosphate kinase FA954_08420 PF00348 Polyprenyl synthetase FA954_08425 PF01040 UbiA prenyltransferase family FA954_08430 PF01209 ubiE/COQ5 methyltransferase family FA954_08435 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 FA954_08445 PF02081 Tryptophan RNA-binding attenuator protein FA954_08455 PF01227 GTP cyclohydrolase I FA954_08460 PF00216 Bacterial DNA-binding protein FA954_08465 PF09547 Stage IV sporulation protein A (spore_IV_A) FA954_08485 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FA954_08485 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FA954_08490 PF02660 Glycerol-3-phosphate acyltransferase FA954_08495 PF01926 50S ribosome-binding GTPase FA954_08495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FA954_08505 PF00575 S1 RNA binding domain FA954_08510 PF01553 Acyltransferase FA954_08515 PF02224 Cytidylate kinase FA954_08520 PF03413 Peptidase propeptide and YPEB domain FA954_08520 PF14620 YpeB sporulation FA954_08530 PF00710 Asparaginase, N-terminal FA954_08530 PF17763 Glutaminase/Asparaginase C-terminal domain FA954_08540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA954_08540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA954_08545 PF02585 GlcNAc-PI de-N-acetylase FA954_08550 PF05389 Negative regulator of genetic competence (MecA) FA954_08570 PF00719 Inorganic pyrophosphatase FA954_08575 PF00392 Bacterial regulatory proteins, gntR family FA954_08585 PF13361 UvrD-like helicase C-terminal domain FA954_08585 PF00580 UvrD/REP helicase N-terminal domain FA954_08590 PF00266 Aminotransferase class-V FA954_08595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FA954_08595 PF01842 ACT domain FA954_08595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FA954_08600 PF00106 short chain dehydrogenase FA954_08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_08605 PF00512 His Kinase A (phospho-acceptor) domain FA954_08605 PF00989 PAS fold FA954_08605 PF18698 Histidine kinase sensor domain FA954_08605 PF00672 HAMP domain FA954_08610 PF00486 Transcriptional regulatory protein, C terminal FA954_08610 PF00072 Response regulator receiver domain FA954_08615 PF01578 Cytochrome C assembly protein FA954_08620 PF05140 ResB-like family FA954_08625 PF00849 RNA pseudouridylate synthase FA954_08625 PF01479 S4 domain FA954_08630 PF07670 Nucleoside recognition FA954_08635 PF07670 Nucleoside recognition FA954_08640 PF07943 Penicillin-binding protein 5, C-terminal domain FA954_08640 PF00768 D-alanyl-D-alanine carboxypeptidase FA954_08645 PF09579 Sporulation protein YtfJ (Spore_YtfJ) FA954_08655 PF02378 Phosphotransferase system, EIIC FA954_08655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA954_08655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA954_08660 PF04079 Segregation and condensation complex subunit ScpB FA954_08665 PF02616 Segregation and condensation protein ScpA FA954_08670 PF00885 6,7-dimethyl-8-ribityllumazine synthase FA954_08675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FA954_08675 PF00925 GTP cyclohydrolase II FA954_08680 PF00677 Lumazine binding domain FA954_08685 PF01872 RibD C-terminal domain FA954_08685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FA954_08695 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FA954_08700 PF13782 Stage V sporulation protein AB FA954_08705 PF12164 Stage V sporulation protein AA FA954_08710 PF04539 Sigma-70 region 3 FA954_08710 PF04545 Sigma-70, region 4 FA954_08710 PF04542 Sigma-70 region 2 FA954_08715 PF13581 Histidine kinase-like ATPase domain FA954_08720 PF01740 STAS domain FA954_08725 PF00768 D-alanyl-D-alanine carboxypeptidase FA954_08725 PF07943 Penicillin-binding protein 5, C-terminal domain FA954_08730 PF05547 Immune inhibitor A peptidase M6 FA954_08735 PF01048 Phosphorylase superfamily FA954_08740 PF01676 Metalloenzyme superfamily FA954_08750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FA954_08750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FA954_08755 PF01475 Ferric uptake regulator family FA954_08760 PF01944 Stage II sporulation protein M FA954_08775 PF00293 NUDIX domain FA954_08780 PF05067 Manganese containing catalase FA954_08800 PF12787 EcsC protein family FA954_08805 PF01546 Peptidase family M20/M25/M40 FA954_08805 PF07687 Peptidase dimerisation domain FA954_08810 PF01039 Carboxyl transferase domain FA954_08820 PF02310 B12 binding domain FA954_08820 PF01642 Methylmalonyl-CoA mutase FA954_08825 PF02310 B12 binding domain FA954_08825 PF01642 Methylmalonyl-CoA mutase FA954_08830 PF00364 Biotin-requiring enzyme FA954_08830 PF02817 e3 binding domain FA954_08830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FA954_08835 PF02779 Transketolase, pyrimidine binding domain FA954_08835 PF02780 Transketolase, C-terminal domain FA954_08840 PF00676 Dehydrogenase E1 component FA954_08845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FA954_08845 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_08850 PF00871 Acetokinase family FA954_08855 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA954_08855 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA954_08860 PF01515 Phosphate acetyl/butaryl transferase FA954_08865 PF00989 PAS fold FA954_08865 PF02954 Bacterial regulatory protein, Fis family FA954_08865 PF00158 Sigma-54 interaction domain FA954_08870 PF11118 Protein of unknown function (DUF2627) FA954_08875 PF03176 MMPL family FA954_08885 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FA954_08885 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FA954_08895 PF00072 Response regulator receiver domain FA954_08895 PF08769 Sporulation initiation factor Spo0A C terminal FA954_08900 PF00375 Sodium:dicarboxylate symporter family FA954_08925 PF17820 PDZ domain FA954_08925 PF05580 SpoIVB peptidase S55 FA954_08930 PF02463 RecF/RecN/SMC N terminal domain FA954_08935 PF02863 Arginine repressor, C-terminal domain FA954_08935 PF01316 Arginine repressor, DNA binding domain FA954_08940 PF01513 ATP-NAD kinase FA954_08950 PF01479 S4 domain FA954_08950 PF01728 FtsJ-like methyltransferase FA954_08955 PF02780 Transketolase, C-terminal domain FA954_08955 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FA954_08955 PF02779 Transketolase, pyrimidine binding domain FA954_08960 PF00348 Polyprenyl synthetase FA954_08965 PF02609 Exonuclease VII small subunit FA954_08970 PF13742 OB-fold nucleic acid binding domain FA954_08970 PF02601 Exonuclease VII, large subunit FA954_08975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FA954_08975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FA954_08985 PF03780 Asp23 family, cell envelope-related function FA954_08990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FA954_08990 PF00289 Biotin carboxylase, N-terminal domain FA954_08990 PF02785 Biotin carboxylase C-terminal domain FA954_08995 PF00364 Biotin-requiring enzyme FA954_09000 PF12685 SpoIIIAH-like protein FA954_09010 PF09581 Stage III sporulation protein AF (Spore_III_AF) FA954_09015 PF09546 Stage III sporulation protein AE (spore_III_AE) FA954_09020 PF06686 Stage III sporulation protein AC/AD protein family FA954_09025 PF06686 Stage III sporulation protein AC/AD protein family FA954_09030 PF09548 Stage III sporulation protein AB (spore_III_AB) FA954_09045 PF07690 Major Facilitator Superfamily FA954_09050 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) FA954_09055 PF04284 Protein of unknown function (DUF441) FA954_09060 PF07690 Major Facilitator Superfamily FA954_09065 PF08712 Scaffold protein Nfu/NifU N terminal FA954_09065 PF13769 Virulence factor FA954_09070 PF09285 Elongation factor P, C-terminal FA954_09070 PF01132 Elongation factor P (EF-P) OB domain FA954_09070 PF08207 Elongation factor P (EF-P) KOW-like domain FA954_09075 PF01321 Creatinase/Prolidase N-terminal domain FA954_09075 PF00557 Metallopeptidase family M24 FA954_09090 PF07136 Protein of unknown function (DUF1385) FA954_09100 PF01734 Patatin-like phospholipase FA954_09105 PF02742 Iron dependent repressor, metal binding and dimerisation domain FA954_09105 PF01325 Iron dependent repressor, N-terminal DNA binding domain FA954_09110 PF03358 NADPH-dependent FMN reductase FA954_09120 PF00221 Aromatic amino acid lyase FA954_09130 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FA954_09130 PF02867 Ribonucleotide reductase, barrel domain FA954_09135 PF01063 Amino-transferase class IV FA954_09145 PF03099 Biotin/lipoate A/B protein ligase family FA954_09150 PF01370 NAD dependent epimerase/dehydratase family FA954_09155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FA954_09155 PF00367 phosphotransferase system, EIIB FA954_09155 PF02378 Phosphotransferase system, EIIC FA954_09160 PF03123 CAT RNA binding domain FA954_09160 PF00874 PRD domain FA954_09165 PF07690 Major Facilitator Superfamily FA954_09170 PF02347 Glycine cleavage system P-protein FA954_09175 PF02347 Glycine cleavage system P-protein FA954_09180 PF01571 Aminomethyltransferase folate-binding domain FA954_09180 PF08669 Glycine cleavage T-protein C-terminal barrel domain FA954_09185 PF00271 Helicase conserved C-terminal domain FA954_09185 PF00176 SNF2 family N-terminal domain FA954_09190 PF11079 Bacterial protein YqhG of unknown function FA954_09195 PF01209 ubiE/COQ5 methyltransferase family FA954_09200 PF00005 ABC transporter FA954_09205 PF00528 Binding-protein-dependent transport system inner membrane component FA954_09210 PF04199 Putative cyclase FA954_09215 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FA954_09215 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FA954_09220 PF00497 Bacterial extracellular solute-binding proteins, family 3 FA954_09230 PF01966 HD domain FA954_09230 PF13286 Phosphohydrolase-associated domain FA954_09235 PF08141 Small acid-soluble spore protein H family FA954_09240 PF00664 ABC transporter transmembrane region FA954_09240 PF00005 ABC transporter FA954_09245 PF00664 ABC transporter transmembrane region FA954_09245 PF00005 ABC transporter FA954_09255 PF01613 Flavin reductase like domain FA954_09265 PF02525 Flavodoxin-like fold FA954_09270 PF02525 Flavodoxin-like fold FA954_09275 PF00156 Phosphoribosyl transferase domain FA954_09280 PF01368 DHH family FA954_09280 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FA954_09280 PF02272 DHHA1 domain FA954_09280 PF17768 RecJ OB domain FA954_09295 PF01943 Polysaccharide biosynthesis protein FA954_09295 PF14667 Polysaccharide biosynthesis C-terminal domain FA954_09300 PF04239 Protein of unknown function (DUF421) FA954_09310 PF02699 Preprotein translocase subunit FA954_09315 PF01702 Queuine tRNA-ribosyltransferase FA954_09320 PF02547 Queuosine biosynthesis protein FA954_09325 PF11146 Protein of unknown function (DUF2905) FA954_09330 PF05491 RuvB C-terminal winged helix domain FA954_09330 PF05496 Holliday junction DNA helicase RuvB P-loop domain FA954_09330 PF17864 RuvB AAA lid domain FA954_09335 PF07499 RuvA, C-terminal domain FA954_09335 PF01330 RuvA N terminal domain FA954_09340 PF02075 Crossover junction endodeoxyribonuclease RuvC FA954_09345 PF01709 Transcriptional regulator FA954_09350 PF02540 NAD synthase FA954_09355 PF02540 NAD synthase FA954_09355 PF00795 Carbon-nitrogen hydrolase FA954_09375 PF00005 ABC transporter FA954_09385 PF01063 Amino-transferase class IV FA954_09390 PF01842 ACT domain FA954_09390 PF00800 Prephenate dehydratase FA954_09395 PF08544 GHMP kinases C terminal FA954_09395 PF00288 GHMP kinases N terminal domain FA954_09400 PF00291 Pyridoxal-phosphate dependent enzyme FA954_09405 PF01842 ACT domain FA954_09410 PF01451 Low molecular weight phosphotyrosine protein phosphatase FA954_09420 PF01018 GTP1/OBG FA954_09420 PF01926 50S ribosome-binding GTPase FA954_09420 PF09269 Domain of unknown function (DUF1967) FA954_09430 PF01016 Ribosomal L27 protein FA954_09435 PF04327 Cysteine protease Prp FA954_09440 PF00829 Ribosomal prokaryotic L21 protein FA954_09445 PF02163 Peptidase family M50 FA954_09455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA954_09460 PF03775 Septum formation inhibitor MinC, C-terminal domain FA954_09480 PF04002 RadC-like JAB domain FA954_09485 PF02545 Maf-like protein FA954_09495 PF01478 Type IV leader peptidase family FA954_09495 PF06750 Bacterial Peptidase A24 N-terminal domain FA954_09500 PF00437 Type II/IV secretion system protein FA954_09505 PF00005 ABC transporter FA954_09520 PF01225 Mur ligase family, catalytic domain FA954_09520 PF08245 Mur ligase middle domain FA954_09520 PF02875 Mur ligase family, glutamate ligase domain FA954_09525 PF02875 Mur ligase family, glutamate ligase domain FA954_09525 PF08245 Mur ligase middle domain FA954_09530 PF08264 Anticodon-binding domain of tRNA FA954_09530 PF10458 Valyl tRNA synthetase tRNA binding arm FA954_09530 PF00133 tRNA synthetases class I (I, L, M and V) FA954_09540 PF01476 LysM domain FA954_09545 PF00202 Aminotransferase class-III FA954_09550 PF00490 Delta-aminolevulinic acid dehydratase FA954_09560 PF03900 Porphobilinogen deaminase, C-terminal domain FA954_09560 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FA954_09565 PF14824 Sirohaem biosynthesis protein central FA954_09570 PF01578 Cytochrome C assembly protein FA954_09575 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FA954_09575 PF01488 Shikimate / quinate 5-dehydrogenase FA954_09575 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FA954_09585 PF00005 ABC transporter FA954_09590 PF00528 Binding-protein-dependent transport system inner membrane component FA954_09600 PF00557 Metallopeptidase family M24 FA954_09610 PF01926 50S ribosome-binding GTPase FA954_09615 PF05362 Lon protease (S16) C-terminal proteolytic domain FA954_09615 PF00004 ATPase family associated with various cellular activities (AAA) FA954_09615 PF02190 ATP-dependent protease La (LON) substrate-binding domain FA954_09620 PF00004 ATPase family associated with various cellular activities (AAA) FA954_09620 PF05362 Lon protease (S16) C-terminal proteolytic domain FA954_09630 PF10431 C-terminal, D2-small domain, of ClpB protein FA954_09630 PF07724 AAA domain (Cdc48 subfamily) FA954_09630 PF06689 ClpX C4-type zinc finger FA954_09635 PF00574 Clp protease FA954_09640 PF05697 Bacterial trigger factor protein (TF) FA954_09640 PF05698 Bacterial trigger factor protein (TF) C-terminus FA954_09640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FA954_09645 PF03060 Nitronate monooxygenase FA954_09655 PF03109 ABC1 family FA954_09660 PF00268 Ribonucleotide reductase, small chain FA954_09665 PF03472 Autoinducer binding domain FA954_09665 PF00196 Bacterial regulatory proteins, luxR family FA954_09670 PF02803 Thiolase, C-terminal domain FA954_09670 PF00108 Thiolase, N-terminal domain FA954_09675 PF13193 AMP-binding enzyme C-terminal domain FA954_09675 PF00501 AMP-binding enzyme FA954_09680 PF00501 AMP-binding enzyme FA954_09680 PF13193 AMP-binding enzyme C-terminal domain FA954_09685 PF13426 PAS domain FA954_09685 PF00158 Sigma-54 interaction domain FA954_09685 PF02954 Bacterial regulatory protein, Fis family FA954_09690 PF02082 Transcriptional regulator FA954_09695 PF10055 Uncharacterized small protein (DUF2292) FA954_09700 PF09084 NMT1/THI5 like FA954_09705 PF00296 Luciferase-like monooxygenase FA954_09710 PF00528 Binding-protein-dependent transport system inner membrane component FA954_09720 PF01554 MatE FA954_09730 PF16736 Single Cache-like FA954_09730 PF00512 His Kinase A (phospho-acceptor) domain FA954_09730 PF00989 PAS fold FA954_09730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_09735 PF00486 Transcriptional regulatory protein, C terminal FA954_09735 PF00072 Response regulator receiver domain FA954_09755 PF01872 RibD C-terminal domain FA954_09760 PF13649 Methyltransferase domain FA954_09765 PF02586 SOS response associated peptidase (SRAP) FA954_09850 PF12850 Calcineurin-like phosphoesterase superfamily domain FA954_09855 PF01725 Ham1 family FA954_09860 PF03725 3' exoribonuclease family, domain 2 FA954_09860 PF01138 3' exoribonuclease family, domain 1 FA954_09870 PF01177 Asp/Glu/Hydantoin racemase FA954_09875 PF01047 MarR family FA954_09880 PF17284 Spermidine synthase tetramerisation domain FA954_09890 PF01047 MarR family FA954_09895 PF01070 FMN-dependent dehydrogenase FA954_09900 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FA954_09900 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FA954_09905 PF04055 Radical SAM superfamily FA954_09905 PF02310 B12 binding domain FA954_09915 PF00583 Acetyltransferase (GNAT) family FA954_09935 PF03737 Aldolase/RraA FA954_09940 PF00080 Copper/zinc superoxide dismutase (SODC) FA954_09945 PF00296 Luciferase-like monooxygenase FA954_09950 PF02110 Hydroxyethylthiazole kinase family FA954_09955 PF08241 Methyltransferase domain FA954_09970 PF00158 Sigma-54 interaction domain FA954_09970 PF13426 PAS domain FA954_09970 PF02954 Bacterial regulatory protein, Fis family FA954_09975 PF00202 Aminotransferase class-III FA954_09980 PF00158 Sigma-54 interaction domain FA954_09980 PF00989 PAS fold FA954_09980 PF02954 Bacterial regulatory protein, Fis family FA954_09985 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_09985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_09985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_09990 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_09990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_09990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_09995 PF00501 AMP-binding enzyme FA954_09995 PF13193 AMP-binding enzyme C-terminal domain FA954_10015 PF13452 N-terminal half of MaoC dehydratase FA954_10020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FA954_10020 PF02770 Acyl-CoA dehydrogenase, middle domain FA954_10020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FA954_10060 PF01144 Coenzyme A transferase FA954_10070 PF13649 Methyltransferase domain FA954_10080 PF08719 Domain of unknown function (DUF1768) FA954_10090 PF01327 Polypeptide deformylase FA954_10115 PF13302 Acetyltransferase (GNAT) domain FA954_10120 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FA954_10130 PF09556 HaeIII restriction endonuclease FA954_10135 PF00145 C-5 cytosine-specific DNA methylase FA954_10140 PF04480 Protein of unknown function (DUF559) FA954_10140 PF03852 DNA mismatch endonuclease Vsr FA954_10145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FA954_10145 PF00391 PEP-utilising enzyme, mobile domain FA954_10260 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA954_10260 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA954_10270 PF00083 Sugar (and other) transporter FA954_10275 PF11762 L-arabinose isomerase C-terminal domain FA954_10275 PF02610 L-arabinose isomerase FA954_10280 PF00596 Class II Aldolase and Adducin N-terminal domain FA954_10285 PF00392 Bacterial regulatory proteins, gntR family FA954_10295 PF07685 CobB/CobQ-like glutamine amidotransferase domain FA954_10295 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FA954_10300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA954_10300 PF09180 Prolyl-tRNA synthetase, C-terminal FA954_10300 PF03129 Anticodon binding domain FA954_10305 PF07690 Major Facilitator Superfamily FA954_10315 PF00668 Condensation domain FA954_10315 PF13193 AMP-binding enzyme C-terminal domain FA954_10315 PF00501 AMP-binding enzyme FA954_10315 PF00550 Phosphopantetheine attachment site FA954_10320 PF13193 AMP-binding enzyme C-terminal domain FA954_10320 PF00501 AMP-binding enzyme FA954_10320 PF00668 Condensation domain FA954_10320 PF00550 Phosphopantetheine attachment site FA954_10325 PF00501 AMP-binding enzyme FA954_10325 PF13193 AMP-binding enzyme C-terminal domain FA954_10325 PF00668 Condensation domain FA954_10325 PF07993 Male sterility protein FA954_10325 PF00550 Phosphopantetheine attachment site FA954_10330 PF00668 Condensation domain FA954_10330 PF13193 AMP-binding enzyme C-terminal domain FA954_10330 PF00501 AMP-binding enzyme FA954_10330 PF00550 Phosphopantetheine attachment site FA954_10335 PF00550 Phosphopantetheine attachment site FA954_10335 PF00501 AMP-binding enzyme FA954_10335 PF00668 Condensation domain FA954_10335 PF13193 AMP-binding enzyme C-terminal domain FA954_10345 PF00196 Bacterial regulatory proteins, luxR family FA954_10350 PF01321 Creatinase/Prolidase N-terminal domain FA954_10350 PF00557 Metallopeptidase family M24 FA954_10365 PF01638 HxlR-like helix-turn-helix FA954_10375 PF05681 Fumarate hydratase (Fumerase) FA954_10375 PF05683 Fumarase C-terminus FA954_10380 PF06207 Protein of unknown function (DUF1002) FA954_10385 PF13183 4Fe-4S dicluster domain FA954_10385 PF13085 2Fe-2S iron-sulfur cluster binding domain FA954_10390 PF00890 FAD binding domain FA954_10390 PF02910 Fumarate reductase flavoprotein C-term FA954_10395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FA954_10400 PF00561 alpha/beta hydrolase fold FA954_10405 PF00005 ABC transporter FA954_10405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA954_10410 PF12911 N-terminal TM domain of oligopeptide transport permease C FA954_10410 PF00528 Binding-protein-dependent transport system inner membrane component FA954_10415 PF00528 Binding-protein-dependent transport system inner membrane component FA954_10420 PF00696 Amino acid kinase family FA954_10420 PF13840 ACT domain FA954_10425 PF02416 mttA/Hcf106 family FA954_10430 PF01593 Flavin containing amine oxidoreductase FA954_10445 PF08459 UvrC Helix-hairpin-helix N-terminal FA954_10445 PF02151 UvrB/uvrC motif FA954_10445 PF01541 GIY-YIG catalytic domain FA954_10455 PF00085 Thioredoxin FA954_10460 PF01012 Electron transfer flavoprotein domain FA954_10460 PF00766 Electron transfer flavoprotein FAD-binding domain FA954_10465 PF01012 Electron transfer flavoprotein domain FA954_10470 PF00440 Bacterial regulatory proteins, tetR family FA954_10470 PF08359 YsiA-like protein, C-terminal region FA954_10475 PF13193 AMP-binding enzyme C-terminal domain FA954_10475 PF00501 AMP-binding enzyme FA954_10480 PF03323 Bacillus/Clostridium GerA spore germination protein FA954_10495 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FA954_10495 PF17126 RsmF rRNA methyltransferase first C-terminal domain FA954_10495 PF01189 16S rRNA methyltransferase RsmB/F FA954_10505 PF06081 Aromatic acid exporter family member 1 FA954_10505 PF11728 Putative aromatic acid exporter C-terminal domain FA954_10515 PF00082 Subtilase family FA954_10520 PF01713 Smr domain FA954_10520 PF00488 MutS domain V FA954_10525 PF01471 Putative peptidoglycan binding domain FA954_10525 PF07486 Cell Wall Hydrolase FA954_10530 PF14791 DNA polymerase beta thumb FA954_10530 PF14716 Helix-hairpin-helix domain FA954_10530 PF02811 PHP domain FA954_10540 PF05164 Cell division protein ZapA FA954_10545 PF03147 Ferredoxin-fold anticodon binding domain FA954_10545 PF01588 Putative tRNA binding domain FA954_10545 PF03484 tRNA synthetase B5 domain FA954_10545 PF03483 B3/4 domain FA954_10545 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FA954_10550 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FA954_10550 PF01409 tRNA synthetases class II core domain (F) FA954_10555 PF00588 SpoU rRNA Methylase family FA954_10555 PF08032 RNA 2'-O ribose methyltransferase substrate binding FA954_10560 PF02254 TrkA-N domain FA954_10560 PF02080 TrkA-C domain FA954_10565 PF14098 Small, acid-soluble spore protein I FA954_10575 PF02600 Disulfide bond formation protein DsbB FA954_10580 PF13462 Thioredoxin FA954_10585 PF08543 Phosphomethylpyrimidine kinase FA954_10590 PF02581 Thiamine monophosphate synthase FA954_10605 PF02638 Glycosyl hydrolase-like 10 FA954_10610 PF00180 Isocitrate/isopropylmalate dehydrogenase FA954_10615 PF00682 HMGL-like FA954_10615 PF08502 LeuA allosteric (dimerisation) domain FA954_10620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FA954_10620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FA954_10625 PF01842 ACT domain FA954_10625 PF10369 Small subunit of acetolactate synthase FA954_10630 PF00205 Thiamine pyrophosphate enzyme, central domain FA954_10630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA954_10630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA954_10635 PF00920 Dehydratase family FA954_10645 PF00453 Ribosomal protein L20 FA954_10650 PF01632 Ribosomal protein L35 FA954_10655 PF00707 Translation initiation factor IF-3, C-terminal domain FA954_10655 PF05198 Translation initiation factor IF-3, N-terminal domain FA954_10660 PF04238 Protein of unknown function (DUF420) FA954_10665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FA954_10665 PF02824 TGS domain FA954_10665 PF03129 Anticodon binding domain FA954_10665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FA954_10680 PF04055 Radical SAM superfamily FA954_10700 PF03477 ATP cone domain FA954_10705 PF00255 Glutathione peroxidase FA954_10710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FA954_10710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FA954_10715 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FA954_10715 PF01464 Transglycosylase SLT domain FA954_10720 PF01121 Dephospho-CoA kinase FA954_10725 PF02659 Putative manganese efflux pump FA954_10730 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FA954_10730 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FA954_10730 PF06827 Zinc finger found in FPG and IleRS FA954_10735 PF00476 DNA polymerase family A FA954_10735 PF01367 5'-3' exonuclease, C-terminal SAM fold FA954_10735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FA954_10740 PF00356 Bacterial regulatory proteins, lacI family FA954_10785 PF00005 ABC transporter FA954_10790 PF00005 ABC transporter FA954_10795 PF00528 Binding-protein-dependent transport system inner membrane component FA954_10800 PF00528 Binding-protein-dependent transport system inner membrane component FA954_10805 PF12849 PBP superfamily domain FA954_10810 PF00989 PAS fold FA954_10810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_10810 PF00512 His Kinase A (phospho-acceptor) domain FA954_10810 PF16736 Single Cache-like FA954_10815 PF00486 Transcriptional regulatory protein, C terminal FA954_10815 PF00072 Response regulator receiver domain FA954_10825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FA954_10825 PF00056 lactate/malate dehydrogenase, NAD binding domain FA954_10830 PF00180 Isocitrate/isopropylmalate dehydrogenase FA954_10835 PF00285 Citrate synthase, C-terminal domain FA954_10840 PF01594 AI-2E family transporter FA954_10850 PF03061 Thioesterase superfamily FA954_10855 PF00391 PEP-utilising enzyme, mobile domain FA954_10855 PF00224 Pyruvate kinase, barrel domain FA954_10855 PF02887 Pyruvate kinase, alpha/beta domain FA954_10860 PF00365 Phosphofructokinase FA954_10865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FA954_10870 PF01039 Carboxyl transferase domain FA954_10870 PF17848 Acetyl-coA carboxylase zinc finger domain FA954_10875 PF07729 FCD domain FA954_10875 PF00392 Bacterial regulatory proteins, gntR family FA954_10880 PF00390 Malic enzyme, N-terminal domain FA954_10880 PF03949 Malic enzyme, NAD binding domain FA954_10895 PF04608 Phosphatidylglycerophosphatase A FA954_10905 PF14034 Sporulation protein YtrH FA954_10920 PF00571 CBS domain FA954_10920 PF07085 DRTGG domain FA954_10920 PF00392 Bacterial regulatory proteins, gntR family FA954_10920 PF03061 Thioesterase superfamily FA954_10935 PF14398 YheC/D like ATP-grasp FA954_10940 PF14398 YheC/D like ATP-grasp FA954_10945 PF14398 YheC/D like ATP-grasp FA954_10950 PF14398 YheC/D like ATP-grasp FA954_10960 PF00877 NlpC/P60 family FA954_10970 PF04293 SpoVR like protein FA954_10975 PF01769 Divalent cation transporter FA954_10975 PF03448 MgtE intracellular N domain FA954_10975 PF00571 CBS domain FA954_10980 PF00246 Zinc carboxypeptidase FA954_10985 PF03323 Bacillus/Clostridium GerA spore germination protein FA954_10990 PF03845 Spore germination protein FA954_10995 PF05504 Spore germination B3/ GerAC like, C-terminal FA954_11000 PF00107 Zinc-binding dehydrogenase FA954_11000 PF08240 Alcohol dehydrogenase GroES-like domain FA954_11005 PF04199 Putative cyclase FA954_11010 PF00266 Aminotransferase class-V FA954_11030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA954_11030 PF00205 Thiamine pyrophosphate enzyme, central domain FA954_11030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA954_11035 PF03358 NADPH-dependent FMN reductase FA954_11040 PF13193 AMP-binding enzyme C-terminal domain FA954_11040 PF00501 AMP-binding enzyme FA954_11040 PF00550 Phosphopantetheine attachment site FA954_11045 PF13193 AMP-binding enzyme C-terminal domain FA954_11045 PF00501 AMP-binding enzyme FA954_11050 PF00501 AMP-binding enzyme FA954_11050 PF13193 AMP-binding enzyme C-terminal domain FA954_11060 PF06276 Ferric iron reductase FhuF-like transporter FA954_11060 PF04183 IucA / IucC family FA954_11065 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FA954_11075 PF04183 IucA / IucC family FA954_11075 PF06276 Ferric iron reductase FhuF-like transporter FA954_11080 PF00282 Pyridoxal-dependent decarboxylase conserved domain FA954_11085 PF00202 Aminotransferase class-III FA954_11095 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FA954_11095 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FA954_11100 PF17853 GGDEF-like domain FA954_11100 PF13556 PucR C-terminal helix-turn-helix domain FA954_11100 PF07905 Purine catabolism regulatory protein-like family FA954_11105 PF09115 DNA polymerase III, delta subunit, C terminal FA954_11115 PF02645 Uncharacterised protein, DegV family COG1307 FA954_11120 PF13249 Squalene-hopene cyclase N-terminal domain FA954_11120 PF13243 Squalene-hopene cyclase C-terminal domain FA954_11125 PF01695 IstB-like ATP binding protein FA954_11125 PF07319 Primosomal protein DnaI N-terminus FA954_11155 PF16884 N-terminal domain of oxidoreductase FA954_11155 PF00107 Zinc-binding dehydrogenase FA954_11160 PF12679 ABC-2 family transporter protein FA954_11165 PF00005 ABC transporter FA954_11170 PF00742 Homoserine dehydrogenase FA954_11170 PF03447 Homoserine dehydrogenase, NAD binding domain FA954_11170 PF01842 ACT domain FA954_11180 PF00571 CBS domain FA954_11180 PF01595 Cyclin M transmembrane N-terminal domain FA954_11180 PF03471 Transporter associated domain FA954_11185 PF01435 Peptidase family M48 FA954_11190 PF03965 Penicillinase repressor FA954_11210 PF00155 Aminotransferase class I and II FA954_11215 PF01370 NAD dependent epimerase/dehydratase family FA954_11220 PF01235 Sodium:alanine symporter family FA954_11225 PF02673 Bacitracin resistance protein BacA FA954_11230 PF13396 Phospholipase_D-nuclease N-terminal FA954_11230 PF13091 PLD-like domain FA954_11240 PF16916 Dimerisation domain of Zinc Transporter FA954_11240 PF01545 Cation efflux family FA954_11250 PF13087 AAA domain FA954_11250 PF13091 PLD-like domain FA954_11260 PF04072 Leucine carboxyl methyltransferase FA954_11265 PF11738 Protein of unknown function (DUF3298) FA954_11265 PF13739 Deacetylase PdaC FA954_11265 PF01522 Polysaccharide deacetylase FA954_11270 PF02557 D-alanyl-D-alanine carboxypeptidase FA954_11280 PF06628 Catalase-related immune-responsive FA954_11280 PF00199 Catalase FA954_11285 PF09335 SNARE associated Golgi protein FA954_11290 PF00589 Phage integrase family FA954_11290 PF02899 Phage integrase, N-terminal SAM-like domain FA954_11300 PF14040 Deoxyribonuclease NucA/NucB FA954_11305 PF11975 Family 4 glycosyl hydrolase C-terminal domain FA954_11305 PF02056 Family 4 glycosyl hydrolase FA954_11370 PF01131 DNA topoisomerase FA954_11370 PF01751 Toprim domain FA954_11375 PF01593 Flavin containing amine oxidoreductase FA954_11390 PF02146 Sir2 family FA954_11415 PF01810 LysE type translocator FA954_11420 PF09297 NADH pyrophosphatase zinc ribbon domain FA954_11420 PF00293 NUDIX domain FA954_11425 PF04285 Protein of unknown function (DUF444) FA954_11430 PF06798 PrkA serine protein kinase C-terminal domain FA954_11430 PF08298 PrkA AAA domain FA954_11440 PF00588 SpoU rRNA Methylase family FA954_11445 PF12671 Putative amidase domain FA954_11455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FA954_11455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FA954_11460 PF08331 Domain of unknown function (DUF1730) FA954_11465 PF00075 RNase H FA954_11475 PF03167 Uracil DNA glycosylase superfamily FA954_11485 PF01494 FAD binding domain FA954_11490 PF00440 Bacterial regulatory proteins, tetR family FA954_11535 PF17932 Tetracyclin repressor-like, C-terminal domain FA954_11535 PF00440 Bacterial regulatory proteins, tetR family FA954_11545 PF03099 Biotin/lipoate A/B protein ligase family FA954_11545 PF10437 Bacterial lipoate protein ligase C-terminus FA954_11550 PF00270 DEAD/DEAH box helicase FA954_11550 PF00271 Helicase conserved C-terminal domain FA954_11550 PF00570 HRDC domain FA954_11550 PF16124 RecQ zinc-binding FA954_11550 PF09382 RQC domain FA954_11560 PF00753 Metallo-beta-lactamase superfamily FA954_11560 PF12706 Beta-lactamase superfamily domain FA954_11565 PF00144 Beta-lactamase FA954_11570 PF07690 Major Facilitator Superfamily FA954_11575 PF00924 Mechanosensitive ion channel FA954_11585 PF00089 Trypsin FA954_11595 PF03190 Protein of unknown function, DUF255 FA954_11630 PF08125 Mannitol dehydrogenase C-terminal domain FA954_11630 PF01232 Mannitol dehydrogenase Rossmann domain FA954_11635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA954_11640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA954_11640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FA954_11640 PF00874 PRD domain FA954_11640 PF08279 HTH domain FA954_11640 PF05043 Mga helix-turn-helix domain FA954_11645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FA954_11645 PF02378 Phosphotransferase system, EIIC FA954_11650 PF01053 Cys/Met metabolism PLP-dependent enzyme FA954_11660 PF09335 SNARE associated Golgi protein FA954_11670 PF00929 Exonuclease FA954_11670 PF14480 DNA polymerase III polC-type N-terminus I FA954_11670 PF02811 PHP domain FA954_11670 PF14579 Helix-hairpin-helix motif FA954_11670 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FA954_11670 PF07733 Bacterial DNA polymerase III alpha NTPase domain FA954_11670 PF11490 DNA polymerase III polC-type N-terminus II FA954_11675 PF00171 Aldehyde dehydrogenase family FA954_11685 PF00188 Cysteine-rich secretory protein family FA954_11715 PF02681 Divergent PAP2 family FA954_11720 PF01497 Periplasmic binding protein FA954_11725 PF00781 Diacylglycerol kinase catalytic domain FA954_11735 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_11740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FA954_11750 PF01521 Iron-sulphur cluster biosynthesis FA954_11760 PF04055 Radical SAM superfamily FA954_11765 PF07293 Protein of unknown function (DUF1450) FA954_11780 PF09587 Bacterial capsule synthesis protein PGA_cap FA954_11785 PF09587 Bacterial capsule synthesis protein PGA_cap FA954_11790 PF14102 Capsule biosynthesis CapC FA954_11795 PF08245 Mur ligase middle domain FA954_11800 PF07315 Protein of unknown function (DUF1462) FA954_11805 PF01053 Cys/Met metabolism PLP-dependent enzyme FA954_11810 PF00291 Pyridoxal-phosphate dependent enzyme FA954_11815 PF01106 NifU-like domain FA954_11825 PF03551 Transcriptional regulator PadR-like family FA954_11855 PF05036 Sporulation related domain FA954_11855 PF01520 N-acetylmuramoyl-L-alanine amidase FA954_11935 PF00574 Clp protease FA954_11995 PF03551 Transcriptional regulator PadR-like family FA954_12015 PF00145 C-5 cytosine-specific DNA methylase FA954_12035 PF01381 Helix-turn-helix FA954_12070 PF00239 Resolvase, N terminal domain FA954_12070 PF02796 Helix-turn-helix domain of resolvase FA954_12080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA954_12080 PF00005 ABC transporter FA954_12085 PF00005 ABC transporter FA954_12085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA954_12090 PF12911 N-terminal TM domain of oligopeptide transport permease C FA954_12090 PF00528 Binding-protein-dependent transport system inner membrane component FA954_12095 PF00528 Binding-protein-dependent transport system inner membrane component FA954_12100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA954_12105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA954_12120 PF03169 OPT oligopeptide transporter protein FA954_12125 PF02913 FAD linked oxidases, C-terminal domain FA954_12125 PF01565 FAD binding domain FA954_12130 PF02754 Cysteine-rich domain FA954_12130 PF13183 4Fe-4S dicluster domain FA954_12150 PF04608 Phosphatidylglycerophosphatase A FA954_12160 PF13344 Haloacid dehalogenase-like hydrolase FA954_12165 PF01209 ubiE/COQ5 methyltransferase family FA954_12175 PF01934 Protein of unknown function DUF86 FA954_12185 PF07875 Coat F domain FA954_12205 PF06265 Protein of unknown function (DUF1027) FA954_12215 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FA954_12215 PF04055 Radical SAM superfamily FA954_12220 PF01032 FecCD transport family FA954_12225 PF01032 FecCD transport family FA954_12230 PF01497 Periplasmic binding protein FA954_12235 PF01551 Peptidase family M23 FA954_12240 PF13520 Amino acid permease FA954_12245 PF00462 Glutaredoxin FA954_12250 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FA954_12265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FA954_12270 PF00005 ABC transporter FA954_12270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA954_12275 PF00005 ABC transporter FA954_12275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FA954_12280 PF08543 Phosphomethylpyrimidine kinase FA954_12285 PF02511 Thymidylate synthase complementing protein FA954_12300 PF01235 Sodium:alanine symporter family FA954_12305 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family FA954_12310 PF00195 Chalcone and stilbene synthases, N-terminal domain FA954_12310 PF02797 Chalcone and stilbene synthases, C-terminal domain FA954_12325 PF01551 Peptidase family M23 FA954_12360 PF04203 Sortase domain FA954_12385 PF00881 Nitroreductase family FA954_12390 PF04055 Radical SAM superfamily FA954_12390 PF08756 YfkB-like domain FA954_12395 PF11084 Protein of unknown function (DUF2621) FA954_12400 PF00313 'Cold-shock' DNA-binding domain FA954_12405 PF08827 Domain of unknown function (DUF1805) FA954_12415 PF02872 5'-nucleotidase, C-terminal domain FA954_12420 PF01904 Protein of unknown function DUF72 FA954_12430 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FA954_12430 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FA954_12430 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FA954_12435 PF00463 Isocitrate lyase family FA954_12440 PF01274 Malate synthase FA954_12445 PF01594 AI-2E family transporter FA954_12450 PF03631 Virulence factor BrkB FA954_12465 PF00132 Bacterial transferase hexapeptide (six repeats) FA954_12465 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FA954_12465 PF14602 Hexapeptide repeat of succinyl-transferase FA954_12470 PF00202 Aminotransferase class-III FA954_12475 PF07687 Peptidase dimerisation domain FA954_12475 PF01546 Peptidase family M20/M25/M40 FA954_12495 PF07556 Protein of unknown function (DUF1538) FA954_12500 PF07556 Protein of unknown function (DUF1538) FA954_12505 PF00589 Phage integrase family FA954_12515 PF01458 Uncharacterized protein family (UPF0051) FA954_12520 PF01592 NifU-like N terminal domain FA954_12525 PF00266 Aminotransferase class-V FA954_12530 PF01458 Uncharacterized protein family (UPF0051) FA954_12535 PF00005 ABC transporter FA954_12550 PF02627 Carboxymuconolactone decarboxylase family FA954_12575 PF01008 Initiation factor 2 subunit family FA954_12580 PF01636 Phosphotransferase enzyme family FA954_12585 PF03079 ARD/ARD' family FA954_12590 PF00596 Class II Aldolase and Adducin N-terminal domain FA954_12600 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FA954_12600 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FA954_12605 PF13460 NAD(P)H-binding FA954_12620 PF07690 Major Facilitator Superfamily FA954_12625 PF11023 Zinc-ribbon containing domain FA954_12635 PF00501 AMP-binding enzyme FA954_12640 PF01475 Ferric uptake regulator family FA954_12650 PF10576 Iron-sulfur binding domain of endonuclease III FA954_12650 PF00633 Helix-hairpin-helix motif FA954_12650 PF00730 HhH-GPD superfamily base excision DNA repair protein FA954_12655 PF13649 Methyltransferase domain FA954_12660 PF00578 AhpC/TSA family FA954_12680 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FA954_12685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FA954_12690 PF02378 Phosphotransferase system, EIIC FA954_12690 PF00367 phosphotransferase system, EIIB FA954_12695 PF11975 Family 4 glycosyl hydrolase C-terminal domain FA954_12695 PF02056 Family 4 glycosyl hydrolase FA954_12700 PF01418 Helix-turn-helix domain, rpiR family FA954_12700 PF01380 SIS domain FA954_12705 PF07070 SpoOM protein FA954_12720 PF00202 Aminotransferase class-III FA954_12725 PF01152 Bacterial-like globin FA954_12735 PF12146 Serine aminopeptidase, S33 FA954_12755 PF00510 Cytochrome c oxidase subunit III FA954_12760 PF00115 Cytochrome C and Quinol oxidase polypeptide I FA954_12780 PF00664 ABC transporter transmembrane region FA954_12780 PF00005 ABC transporter FA954_12785 PF06018 CodY GAF-like domain FA954_12785 PF08222 CodY helix-turn-helix domain FA954_12790 PF10502 Signal peptidase, peptidase S26 FA954_12800 PF03807 NADP oxidoreductase coenzyme F420-dependent FA954_12800 PF14748 Pyrroline-5-carboxylate reductase dimerisation FA954_12815 PF04294 VanW like protein FA954_12820 PF14815 NUDIX domain FA954_12820 PF00730 HhH-GPD superfamily base excision DNA repair protein FA954_12825 PF04307 LexA-binding, inner membrane-associated putative hydrolase FA954_12830 PF00924 Mechanosensitive ion channel FA954_12835 PF00730 HhH-GPD superfamily base excision DNA repair protein FA954_12840 PF06725 3D domain FA954_12840 PF01476 LysM domain FA954_12850 PF00005 ABC transporter FA954_12855 PF01979 Amidohydrolase family FA954_12855 PF13382 Adenine deaminase C-terminal domain FA954_12870 PF02844 Phosphoribosylglycinamide synthetase, N domain FA954_12870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FA954_12870 PF02843 Phosphoribosylglycinamide synthetase, C domain FA954_12880 PF01808 AICARFT/IMPCHase bienzyme FA954_12880 PF02142 MGS-like domain FA954_12885 PF00551 Formyl transferase FA954_12890 PF02769 AIR synthase related protein, C-terminal domain FA954_12890 PF00586 AIR synthase related protein, N-terminal domain FA954_12895 PF00156 Phosphoribosyl transferase domain FA954_12900 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FA954_12900 PF02769 AIR synthase related protein, C-terminal domain FA954_12900 PF00586 AIR synthase related protein, N-terminal domain FA954_12910 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FA954_12915 PF01259 SAICAR synthetase FA954_12920 PF00206 Lyase FA954_12920 PF10397 Adenylosuccinate lyase C-terminus FA954_12925 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FA954_12925 PF02222 ATP-grasp domain FA954_12930 PF00731 AIR carboxylase FA954_12960 PF00860 Permease family FA954_12965 PF02540 NAD synthase FA954_12965 PF00958 GMP synthase C terminal domain FA954_12965 PF00117 Glutamine amidotransferase class-I FA954_12970 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FA954_12990 PF02595 Glycerate kinase family FA954_12995 PF02447 GntP family permease FA954_13010 PF00106 short chain dehydrogenase FA954_13075 PF14436 Bacterial EndoU nuclease FA954_13075 PF04740 LXG domain of WXG superfamily FA954_13095 PF04740 LXG domain of WXG superfamily FA954_13095 PF14436 Bacterial EndoU nuclease FA954_13100 PF00474 Sodium:solute symporter family FA954_13105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FA954_13105 PF00205 Thiamine pyrophosphate enzyme, central domain FA954_13105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FA954_13110 PF16916 Dimerisation domain of Zinc Transporter FA954_13110 PF01545 Cation efflux family FA954_13120 PF08525 Opacity-associated protein A N-terminal motif FA954_13120 PF01551 Peptidase family M23 FA954_13120 PF01476 LysM domain FA954_13125 PF01522 Polysaccharide deacetylase FA954_13125 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain FA954_13130 PF00535 Glycosyl transferase family 2 FA954_13135 PF00083 Sugar (and other) transporter FA954_13140 PF01261 Xylose isomerase-like TIM barrel FA954_13145 PF00118 TCP-1/cpn60 chaperonin family FA954_13150 PF00166 Chaperonin 10 Kd subunit FA954_13160 PF00902 Sec-independent protein translocase protein (TatC) FA954_13165 PF02629 CoA binding domain FA954_13165 PF06971 Putative DNA-binding protein N-terminus FA954_13170 PF01812 5-formyltetrahydrofolate cyclo-ligase family FA954_13175 PF00005 ABC transporter FA954_13175 PF16326 ABC transporter C-terminal domain FA954_13175 PF12848 ABC transporter FA954_13180 PF02626 Carboxyltransferase domain, subdomain A and B FA954_13185 PF03746 LamB/YcsF family FA954_13190 PF02682 Carboxyltransferase domain, subdomain C and D FA954_13195 PF00814 Glycoprotease family FA954_13200 PF00583 Acetyltransferase (GNAT) family FA954_13205 PF00814 Glycoprotease family FA954_13210 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FA954_13215 PF00586 AIR synthase related protein, N-terminal domain FA954_13215 PF02769 AIR synthase related protein, C-terminal domain FA954_13280 PF01027 Inhibitor of apoptosis-promoting Bax1 FA954_13290 PF00899 ThiF family FA954_13295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FA954_13295 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FA954_13305 PF16921 Tex protein YqgF-like domain FA954_13305 PF09371 Tex-like protein N-terminal domain FA954_13305 PF00575 S1 RNA binding domain FA954_13305 PF17674 HHH domain FA954_13315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_13315 PF00672 HAMP domain FA954_13315 PF00512 His Kinase A (phospho-acceptor) domain FA954_13320 PF00072 Response regulator receiver domain FA954_13320 PF00486 Transcriptional regulatory protein, C terminal FA954_13325 PF13649 Methyltransferase domain FA954_13330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FA954_13330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FA954_13335 PF04542 Sigma-70 region 2 FA954_13335 PF04545 Sigma-70, region 4 FA954_13335 PF04539 Sigma-70 region 3 FA954_13340 PF13581 Histidine kinase-like ATPase domain FA954_13345 PF01740 STAS domain FA954_13350 PF07228 Stage II sporulation protein E (SpoIIE) FA954_13350 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain FA954_13355 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FA954_13360 PF01402 Ribbon-helix-helix protein, copG family FA954_13365 PF01168 Alanine racemase, N-terminal domain FA954_13365 PF00842 Alanine racemase, C-terminal domain FA954_13380 PF01256 Carbohydrate kinase FA954_13380 PF03853 YjeF-related protein N-terminus FA954_13385 PF01648 4'-phosphopantetheinyl transferase superfamily FA954_13410 PF00324 Amino acid permease FA954_13430 PF00512 His Kinase A (phospho-acceptor) domain FA954_13430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FA954_13435 PF00486 Transcriptional regulatory protein, C terminal FA954_13435 PF00072 Response regulator receiver domain FA954_13455 PF01381 Helix-turn-helix FA954_13455 PF07883 Cupin domain FA954_13470 PF00239 Resolvase, N terminal domain FA954_13470 PF02796 Helix-turn-helix domain of resolvase FA954_13480 PF01636 Phosphotransferase enzyme family FA954_13505 PF13614 AAA domain FA954_13545 PF00392 Bacterial regulatory proteins, gntR family FA954_13545 PF07729 FCD domain FA954_13550 PF00293 NUDIX domain FA954_13550 PF13344 Haloacid dehalogenase-like hydrolase