locus-tag class description Thit_0001 PF00308 Bacterial dnaA protein Thit_0001 PF08299 Bacterial dnaA protein helix-turn-helix Thit_0001 PF11638 DnaA N-terminal domain Thit_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Thit_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Thit_0002 PF02767 DNA polymerase III beta subunit, central domain Thit_0004 PF02463 RecF/RecN/SMC N terminal domain Thit_0006 PF01055 Glycosyl hydrolases family 31 Thit_0006 PF16338 Domain of unknown function (DUF4968) Thit_0006 PF17137 Domain of unknown function (DUF5110) Thit_0006 PF13802 Galactose mutarotase-like Thit_0007 PF07685 CobB/CobQ-like glutamine amidotransferase domain Thit_0008 PF08353 Domain of unknown function (DUF1727) Thit_0008 PF08245 Mur ligase middle domain Thit_0010 PF01751 Toprim domain Thit_0010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0010 PF00986 DNA gyrase B subunit, carboxyl terminus Thit_0010 PF00204 DNA gyrase B Thit_0011 PF03989 DNA gyrase C-terminal domain, beta-propeller Thit_0011 PF00521 DNA gyrase/topoisomerase IV, subunit A Thit_0012 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Thit_0013 PF01842 ACT domain Thit_0013 PF10369 Small subunit of acetolactate synthase Thit_0014 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Thit_0014 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Thit_0015 PF00682 HMGL-like Thit_0016 PF00330 Aconitase family (aconitate hydratase) Thit_0017 PF00694 Aconitase C-terminal domain Thit_0018 PF00180 Isocitrate/isopropylmalate dehydrogenase Thit_0019 PF00920 Dehydratase family Thit_0020 PF00205 Thiamine pyrophosphate enzyme, central domain Thit_0020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Thit_0020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Thit_0021 PF01872 RibD C-terminal domain Thit_0021 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Thit_0022 PF00677 Lumazine binding domain Thit_0023 PF00925 GTP cyclohydrolase II Thit_0023 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Thit_0024 PF00885 6,7-dimethyl-8-ribityllumazine synthase Thit_0025 PF01594 AI-2E family transporter Thit_0027 PF10502 Signal peptidase, peptidase S26 Thit_0028 PF02403 Seryl-tRNA synthetase N-terminal domain Thit_0028 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thit_0029 PF03816 Cell envelope-related transcriptional attenuator domain Thit_0030 PF03699 Uncharacterised protein family (UPF0182) Thit_0032 PF14437 MafB19-like deaminase Thit_0033 PF01966 HD domain Thit_0034 PF12169 DNA polymerase III subunits gamma and tau domain III Thit_0035 PF02575 YbaB/EbfC DNA-binding family Thit_0036 PF02132 RecR protein Thit_0036 PF13662 Toprim domain Thit_0036 PF00633 Helix-hairpin-helix motif Thit_0037 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Thit_0038 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Thit_0039 PF01966 HD domain Thit_0044 PF00849 RNA pseudouridylate synthase Thit_0044 PF01479 S4 domain Thit_0045 PF00356 Bacterial regulatory proteins, lacI family Thit_0046 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Thit_0047 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0049 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thit_0049 PF00005 ABC transporter Thit_0050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thit_0050 PF00005 ABC transporter Thit_0053 PF04041 beta-1,4-mannooligosaccharide phosphorylase Thit_0054 PF04041 beta-1,4-mannooligosaccharide phosphorylase Thit_0055 PF00483 Nucleotidyl transferase Thit_0058 PF01820 D-ala D-ala ligase N-terminus Thit_0058 PF07478 D-ala D-ala ligase C-terminus Thit_0060 PF00440 Bacterial regulatory proteins, tetR family Thit_0060 PF08361 MAATS-type transcriptional repressor, C-terminal region Thit_0062 PF00686 Starch binding domain Thit_0062 PF02903 Alpha amylase, N-terminal ig-like domain Thit_0062 PF00128 Alpha amylase, catalytic domain Thit_0064 PF05681 Fumarate hydratase (Fumerase) Thit_0066 PF03167 Uracil DNA glycosylase superfamily Thit_0072 PF01968 Hydantoinase/oxoprolinase Thit_0072 PF05378 Hydantoinase/oxoprolinase N-terminal region Thit_0073 PF01177 Asp/Glu/Hydantoin racemase Thit_0075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thit_0075 PF03466 LysR substrate binding domain Thit_0076 PF04143 Sulphur transport Thit_0078 PF04143 Sulphur transport Thit_0079 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_0080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_0081 PF00480 ROK family Thit_0082 PF13673 Acetyltransferase (GNAT) domain Thit_0082 PF03352 Methyladenine glycosylase Thit_0082 PF00117 Glutamine amidotransferase class-I Thit_0082 PF00958 GMP synthase C terminal domain Thit_0082 PF13302 Acetyltransferase (GNAT) domain Thit_0083 PF10764 Inhibitor of sigma-G Gin Thit_0084 PF01276 Orn/Lys/Arg decarboxylase, major domain Thit_0084 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Thit_0085 PF02223 Thymidylate kinase Thit_0086 PF06153 Cyclic-di-AMP receptor Thit_0088 PF09115 DNA polymerase III, delta subunit, C terminal Thit_0089 PF04468 PSP1 C-terminal conserved region Thit_0091 PF05175 Methyltransferase small domain Thit_0092 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_0093 PF01545 Cation efflux family Thit_0093 PF16916 Dimerisation domain of Zinc Transporter Thit_0094 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Thit_0094 PF18277 AbrB C-terminal domain Thit_0095 PF07670 Nucleoside recognition Thit_0096 PF07670 Nucleoside recognition Thit_0097 PF12627 Probable RNA and SrmB- binding site of polymerase A Thit_0097 PF01743 Poly A polymerase head domain Thit_0097 PF01966 HD domain Thit_0098 PF01588 Putative tRNA binding domain Thit_0098 PF08264 Anticodon-binding domain of tRNA Thit_0098 PF09334 tRNA synthetases class I (M) Thit_0099 PF01026 TatD related DNase Thit_0100 PF03990 G5-linked-Ubiquitin-like domain Thit_0100 PF07501 G5 domain Thit_0100 PF06725 3D domain Thit_0101 PF00398 Ribosomal RNA adenine dimethylase Thit_0103 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_0108 PF10609 NUBPL iron-transfer P-loop NTPase Thit_0108 PF01883 Iron-sulfur cluster assembly protein Thit_0111 PF00004 ATPase family associated with various cellular activities (AAA) Thit_0111 PF17862 AAA+ lid domain Thit_0111 PF06480 FtsH Extracellular Thit_0111 PF01434 Peptidase family M41 Thit_0112 PF10531 SLBB domain Thit_0112 PF13375 RnfC Barrel sandwich hybrid domain Thit_0112 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Thit_0112 PF13237 4Fe-4S dicluster domain Thit_0113 PF03116 NQR2, RnfD, RnfE family Thit_0114 PF04205 FMN-binding domain Thit_0115 PF02508 Rnf-Nqr subunit, membrane protein Thit_0116 PF02508 Rnf-Nqr subunit, membrane protein Thit_0117 PF00037 4Fe-4S binding domain Thit_0117 PF04060 Putative Fe-S cluster Thit_0117 PF13187 4Fe-4S dicluster domain Thit_0120 PF01116 Fructose-bisphosphate aldolase class-II Thit_0121 PF07497 Rho termination factor, RNA-binding domain Thit_0121 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_0121 PF07498 Rho termination factor, N-terminal domain Thit_0122 PF01197 Ribosomal protein L31 Thit_0123 PF00265 Thymidine kinase Thit_0124 PF07136 Protein of unknown function (DUF1385) Thit_0125 PF17827 PrmC N-terminal domain Thit_0125 PF13847 Methyltransferase domain Thit_0126 PF00472 RF-1 domain Thit_0126 PF03462 PCRF domain Thit_0127 PF02535 ZIP Zinc transporter Thit_0128 PF03481 Putative GTP-binding controlling metal-binding Thit_0128 PF01300 Telomere recombination Thit_0129 PF02502 Ribose/Galactose Isomerase Thit_0132 PF00953 Glycosyl transferase family 4 Thit_0133 PF02350 UDP-N-acetylglucosamine 2-epimerase Thit_0136 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Thit_0137 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Thit_0137 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Thit_0139 PF08486 Stage II sporulation protein Thit_0141 PF12116 Stage III sporulation protein D Thit_0143 PF00460 Flagella basal body rod protein Thit_0143 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Thit_0144 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Thit_0144 PF00460 Flagella basal body rod protein Thit_0146 PF07977 FabA-like domain Thit_0147 PF03023 Lipid II flippase MurJ Thit_0153 PF03610 PTS system fructose IIA component Thit_0153 PF00158 Sigma-54 interaction domain Thit_0153 PF00874 PRD domain Thit_0154 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0154 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0154 PF02378 Phosphotransferase system, EIIC Thit_0155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0156 PF03611 PTS system sugar-specific permease component Thit_0157 PF01842 ACT domain Thit_0157 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_0157 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_0159 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Thit_0160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Thit_0160 PF13378 Enolase C-terminal domain-like Thit_0161 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_0161 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_0162 PF01081 KDPG and KHG aldolase Thit_0164 PF03610 PTS system fructose IIA component Thit_0164 PF00874 PRD domain Thit_0164 PF00158 Sigma-54 interaction domain Thit_0165 PF03610 PTS system fructose IIA component Thit_0167 PF03613 PTS system mannose/fructose/sorbose family IID component Thit_0168 PF03830 PTS system sorbose subfamily IIB component Thit_0169 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_0169 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_0170 PF01081 KDPG and KHG aldolase Thit_0171 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_0171 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_0172 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Thit_0172 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Thit_0173 PF02386 Cation transport protein Thit_0174 PF02254 TrkA-N domain Thit_0174 PF02080 TrkA-C domain Thit_0176 PF01261 Xylose isomerase-like TIM barrel Thit_0177 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Thit_0177 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Thit_0178 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Thit_0178 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Thit_0180 PF02614 Glucuronate isomerase Thit_0181 PF01081 KDPG and KHG aldolase Thit_0182 PF08125 Mannitol dehydrogenase C-terminal domain Thit_0182 PF01232 Mannitol dehydrogenase Rossmann domain Thit_0183 PF00294 pfkB family carbohydrate kinase Thit_0184 PF03786 D-mannonate dehydratase (UxuA) Thit_0185 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0186 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0188 PF00331 Glycosyl hydrolase family 10 Thit_0189 PF03648 Glycosyl hydrolase family 67 N-terminus Thit_0189 PF07477 Glycosyl hydrolase family 67 C-terminus Thit_0189 PF07488 Glycosyl hydrolase family 67 middle domain Thit_0190 PF03512 Glycosyl hydrolase family 52 Thit_0191 PF05448 Acetyl xylan esterase (AXE1) Thit_0192 PF00331 Glycosyl hydrolase family 10 Thit_0192 PF06452 Carbohydrate family 9 binding domain-like Thit_0192 PF02018 Carbohydrate binding domain Thit_0192 PF00395 S-layer homology domain Thit_0196 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0197 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0198 PF00933 Glycosyl hydrolase family 3 N terminal domain Thit_0198 PF14310 Fibronectin type III-like domain Thit_0198 PF01915 Glycosyl hydrolase family 3 C-terminal domain Thit_0199 PF01047 MarR family Thit_0199 PF00480 ROK family Thit_0201 PF00933 Glycosyl hydrolase family 3 N terminal domain Thit_0201 PF01915 Glycosyl hydrolase family 3 C-terminal domain Thit_0203 PF01979 Amidohydrolase family Thit_0204 PF00155 Aminotransferase class I and II Thit_0205 PF01037 Lrp/AsnC ligand binding domain Thit_0207 PF04023 FeoA domain Thit_0207 PF17910 FeoB cytosolic helical domain Thit_0207 PF02421 Ferrous iron transport protein B Thit_0207 PF07670 Nucleoside recognition Thit_0207 PF07664 Ferrous iron transport protein B C terminus Thit_0209 PF00005 ABC transporter Thit_0210 PF02361 Cobalt transport protein Thit_0211 PF13190 PDGLE domain Thit_0211 PF01891 Cobalt uptake substrate-specific transmembrane region Thit_0212 PF13190 PDGLE domain Thit_0212 PF01891 Cobalt uptake substrate-specific transmembrane region Thit_0213 PF01402 Ribbon-helix-helix protein, copG family Thit_0213 PF08753 NikR C terminal nickel binding domain Thit_0214 PF00588 SpoU rRNA Methylase family Thit_0215 PF00817 impB/mucB/samB family Thit_0215 PF11799 impB/mucB/samB family C-terminal domain Thit_0215 PF11798 IMS family HHH motif Thit_0216 PF01554 MatE Thit_0217 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Thit_0218 PF00005 ABC transporter Thit_0219 PF12704 MacB-like periplasmic core domain Thit_0219 PF00005 ABC transporter Thit_0219 PF02687 FtsX-like permease family Thit_0221 PF01814 Hemerythrin HHE cation binding domain Thit_0222 PF01557 Fumarylacetoacetate (FAA) hydrolase family Thit_0223 PF12705 PD-(D/E)XK nuclease superfamily Thit_0224 PF13361 UvrD-like helicase C-terminal domain Thit_0224 PF00580 UvrD/REP helicase N-terminal domain Thit_0224 PF12705 PD-(D/E)XK nuclease superfamily Thit_0225 PF00149 Calcineurin-like phosphoesterase Thit_0225 PF12320 Type 5 capsule protein repressor C-terminal domain Thit_0226 PF13175 AAA ATPase domain Thit_0227 PF10417 C-terminal domain of 1-Cys peroxiredoxin Thit_0227 PF00578 AhpC/TSA family Thit_0230 PF13936 Helix-turn-helix domain Thit_0232 PF01636 Phosphotransferase enzyme family Thit_0232 PF18085 Maltokinase N-terminal cap domain Thit_0233 PF13439 Glycosyltransferase Family 4 Thit_0233 PF00534 Glycosyl transferases group 1 Thit_0234 PF06782 Uncharacterised protein family (UPF0236) Thit_0235 PF09335 SNARE associated Golgi protein Thit_0236 PF05949 Bacterial protein of unknown function (DUF881) Thit_0237 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Thit_0237 PF00056 lactate/malate dehydrogenase, NAD binding domain Thit_0239 PF01593 Flavin containing amine oxidoreductase Thit_0240 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_0240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Thit_0240 PF13247 4Fe-4S dicluster domain Thit_0243 PF07694 5TMR of 5TMR-LYT Thit_0243 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0243 PF06580 Histidine kinase Thit_0244 PF00196 Bacterial regulatory proteins, luxR family Thit_0244 PF00072 Response regulator receiver domain Thit_0245 PF13407 Periplasmic binding protein domain Thit_0246 PF13407 Periplasmic binding protein domain Thit_0247 PF00005 ABC transporter Thit_0248 PF02653 Branched-chain amino acid transport system / permease component Thit_0249 PF02347 Glycine cleavage system P-protein Thit_0250 PF02347 Glycine cleavage system P-protein Thit_0251 PF01597 Glycine cleavage H-protein Thit_0253 PF08669 Glycine cleavage T-protein C-terminal barrel domain Thit_0253 PF01571 Aminomethyltransferase folate-binding domain Thit_0254 PF10437 Bacterial lipoate protein ligase C-terminus Thit_0254 PF03099 Biotin/lipoate A/B protein ligase family Thit_0255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thit_0255 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_0258 PF00155 Aminotransferase class I and II Thit_0259 PF08279 HTH domain Thit_0259 PF05043 Mga helix-turn-helix domain Thit_0259 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0259 PF00874 PRD domain Thit_0261 PF00365 Phosphofructokinase Thit_0263 PF03611 PTS system sugar-specific permease component Thit_0266 PF01116 Fructose-bisphosphate aldolase class-II Thit_0272 PF00465 Iron-containing alcohol dehydrogenase Thit_0273 PF00905 Penicillin binding protein transpeptidase domain Thit_0273 PF00912 Transglycosylase Thit_0275 PF00440 Bacterial regulatory proteins, tetR family Thit_0278 PF01869 BadF/BadG/BcrA/BcrD ATPase family Thit_0280 PF00005 ABC transporter Thit_0281 PF03649 Uncharacterised protein family (UPF0014) Thit_0282 PF07676 WD40-like Beta Propeller Repeat Thit_0282 PF04052 TolB amino-terminal domain Thit_0284 PF13603 Leucyl-tRNA synthetase, Domain 2 Thit_0284 PF09334 tRNA synthetases class I (M) Thit_0284 PF08264 Anticodon-binding domain of tRNA Thit_0284 PF00133 tRNA synthetases class I (I, L, M and V) Thit_0285 PF03591 AzlC protein Thit_0289 PF00294 pfkB family carbohydrate kinase Thit_0290 PF04227 Indigoidine synthase A like protein Thit_0293 PF00874 PRD domain Thit_0293 PF00158 Sigma-54 interaction domain Thit_0293 PF03610 PTS system fructose IIA component Thit_0294 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0295 PF02378 Phosphotransferase system, EIIC Thit_0296 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Thit_0297 PF11975 Family 4 glycosyl hydrolase C-terminal domain Thit_0297 PF02056 Family 4 glycosyl hydrolase Thit_0299 PF00232 Glycosyl hydrolase family 1 Thit_0302 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0302 PF02378 Phosphotransferase system, EIIC Thit_0303 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0303 PF00874 PRD domain Thit_0303 PF05043 Mga helix-turn-helix domain Thit_0303 PF08279 HTH domain Thit_0304 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0305 PF08125 Mannitol dehydrogenase C-terminal domain Thit_0305 PF01232 Mannitol dehydrogenase Rossmann domain Thit_0306 PF00149 Calcineurin-like phosphoesterase Thit_0306 PF02872 5'-nucleotidase, C-terminal domain Thit_0307 PF01207 Dihydrouridine synthase (Dus) Thit_0308 PF01925 Sulfite exporter TauE/SafE Thit_0310 PF00356 Bacterial regulatory proteins, lacI family Thit_0313 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Thit_0314 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0315 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0315 PF12911 N-terminal TM domain of oligopeptide transport permease C Thit_0316 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thit_0316 PF00005 ABC transporter Thit_0317 PF00005 ABC transporter Thit_0317 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thit_0318 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Thit_0318 PF00703 Glycosyl hydrolases family 2 Thit_0318 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Thit_0318 PF02837 Glycosyl hydrolases family 2, sugar binding domain Thit_0318 PF16355 Domain of unknown function (DUF4982) Thit_0320 PF00950 ABC 3 transport family Thit_0321 PF00005 ABC transporter Thit_0322 PF01297 Zinc-uptake complex component A periplasmic Thit_0323 PF01475 Ferric uptake regulator family Thit_0324 PF07726 ATPase family associated with various cellular activities (AAA) Thit_0324 PF17863 AAA lid domain Thit_0327 PF04011 LemA family Thit_0328 PF03466 LysR substrate binding domain Thit_0328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Thit_0329 PF17179 4Fe-4S dicluster domain Thit_0330 PF00175 Oxidoreductase NAD-binding domain Thit_0330 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Thit_0331 PF13187 4Fe-4S dicluster domain Thit_0331 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Thit_0331 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Thit_0332 PF01026 TatD related DNase Thit_0335 PF01592 NifU-like N terminal domain Thit_0338 PF01170 Putative RNA methylase family UPF0020 Thit_0338 PF02926 THUMP domain Thit_0339 PF01497 Periplasmic binding protein Thit_0340 PF01032 FecCD transport family Thit_0341 PF00005 ABC transporter Thit_0342 PF07685 CobB/CobQ-like glutamine amidotransferase domain Thit_0342 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Thit_0343 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Thit_0343 PF07685 CobB/CobQ-like glutamine amidotransferase domain Thit_0344 PF03186 CobD/Cbib protein Thit_0347 PF00155 Aminotransferase class I and II Thit_0348 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Thit_0349 PF02654 Cobalamin-5-phosphate synthase Thit_0351 PF02570 Precorrin-8X methylmutase Thit_0352 PF01888 CbiD Thit_0353 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_0354 PF05175 Methyltransferase small domain Thit_0355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_0356 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_0357 PF11761 Cobalamin biosynthesis central region Thit_0357 PF01890 Cobalamin synthesis G C-terminus Thit_0357 PF11760 Cobalamin synthesis G N-terminal Thit_0358 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Thit_0358 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_0359 PF02571 Precorrin-6x reductase CbiJ/CobK Thit_0360 PF01488 Shikimate / quinate 5-dehydrogenase Thit_0360 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Thit_0360 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Thit_0361 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Thit_0361 PF03900 Porphobilinogen deaminase, C-terminal domain Thit_0363 PF00490 Delta-aminolevulinic acid dehydratase Thit_0364 PF10414 Sirohaem synthase dimerisation region Thit_0364 PF14824 Sirohaem biosynthesis protein central Thit_0364 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_0367 PF00202 Aminotransferase class-III Thit_0368 PF01891 Cobalt uptake substrate-specific transmembrane region Thit_0369 PF02553 Cobalt transport protein component CbiN Thit_0371 PF00005 ABC transporter Thit_0372 PF00180 Isocitrate/isopropylmalate dehydrogenase Thit_0384 PF00005 ABC transporter Thit_0389 PF04055 Radical SAM superfamily Thit_0389 PF13186 Iron-sulfur cluster-binding domain Thit_0390 PF07690 Major Facilitator Superfamily Thit_0397 PF00005 ABC transporter Thit_0399 PF00196 Bacterial regulatory proteins, luxR family Thit_0399 PF00072 Response regulator receiver domain Thit_0407 PF00664 ABC transporter transmembrane region Thit_0407 PF00005 ABC transporter Thit_0409 PF00005 ABC transporter Thit_0412 PF05343 M42 glutamyl aminopeptidase Thit_0416 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Thit_0416 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Thit_0416 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Thit_0416 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Thit_0416 PF10371 Domain of unknown function Thit_0417 PF01966 HD domain Thit_0419 PF00672 HAMP domain Thit_0419 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Thit_0419 PF02743 Cache domain Thit_0420 PF07837 Formiminotransferase domain, N-terminal subdomain Thit_0420 PF02971 Formiminotransferase domain Thit_0421 PF01979 Amidohydrolase family Thit_0424 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0425 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0426 PF01547 Bacterial extracellular solute-binding protein Thit_0427 PF06580 Histidine kinase Thit_0427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0427 PF00672 HAMP domain Thit_0427 PF02743 Cache domain Thit_0428 PF00072 Response regulator receiver domain Thit_0428 PF12833 Helix-turn-helix domain Thit_0429 PF04961 Formiminotransferase-cyclodeaminase Thit_0430 PF02608 ABC transporter substrate-binding protein PnrA-like Thit_0434 PF07702 UTRA domain Thit_0434 PF00392 Bacterial regulatory proteins, gntR family Thit_0435 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Thit_0436 PF01676 Metalloenzyme superfamily Thit_0437 PF02885 Glycosyl transferase family, helical bundle domain Thit_0437 PF00591 Glycosyl transferase family, a/b domain Thit_0437 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Thit_0438 PF00672 HAMP domain Thit_0438 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Thit_0440 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Thit_0440 PF00367 phosphotransferase system, EIIB Thit_0440 PF02378 Phosphotransferase system, EIIC Thit_0441 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Thit_0442 PF00874 PRD domain Thit_0442 PF03123 CAT RNA binding domain Thit_0443 PF00682 HMGL-like Thit_0444 PF00330 Aconitase family (aconitate hydratase) Thit_0445 PF02261 Aspartate decarboxylase Thit_0446 PF02569 Pantoate-beta-alanine ligase Thit_0447 PF02548 Ketopantoate hydroxymethyltransferase Thit_0449 PF08704 tRNA methyltransferase complex GCD14 subunit Thit_0451 PF04239 Protein of unknown function (DUF421) Thit_0453 PF00356 Bacterial regulatory proteins, lacI family Thit_0454 PF00072 Response regulator receiver domain Thit_0454 PF00486 Transcriptional regulatory protein, C terminal Thit_0455 PF00512 His Kinase A (phospho-acceptor) domain Thit_0455 PF16736 Single Cache-like Thit_0455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0455 PF00989 PAS fold Thit_0460 PF02915 Rubrerythrin Thit_0461 PF02597 ThiS family Thit_0462 PF01171 PP-loop family Thit_0463 PF14461 Prokaryotic E2 family B Thit_0463 PF00899 ThiF family Thit_0464 PF02772 S-adenosylmethionine synthetase, central domain Thit_0464 PF02773 S-adenosylmethionine synthetase, C-terminal domain Thit_0464 PF00438 S-adenosylmethionine synthetase, N-terminal domain Thit_0465 PF13538 UvrD-like helicase C-terminal domain Thit_0465 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Thit_0465 PF14490 Helix-hairpin-helix containing domain Thit_0466 PF00156 Phosphoribosyl transferase domain Thit_0470 PF00460 Flagella basal body rod protein Thit_0470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Thit_0471 PF00700 Bacterial flagellin C-terminal helical region Thit_0471 PF00669 Bacterial flagellin N-terminal helical region Thit_0473 PF02623 FliW protein Thit_0474 PF02599 Global regulator protein family Thit_0475 PF00700 Bacterial flagellin C-terminal helical region Thit_0475 PF00669 Bacterial flagellin N-terminal helical region Thit_0477 PF01973 Protein of unknown function DUF115 Thit_0478 PF08485 Polysaccharide biosynthesis protein C-terminal Thit_0478 PF02719 Polysaccharide biosynthesis protein Thit_0479 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Thit_0480 PF02350 UDP-N-acetylglucosamine 2-epimerase Thit_0481 PF03102 NeuB family Thit_0481 PF08666 SAF domain Thit_0483 PF00571 CBS domain Thit_0483 PF01380 SIS domain Thit_0484 PF02348 Cytidylyltransferase Thit_0484 PF13472 GDSL-like Lipase/Acylhydrolase family Thit_0485 PF02086 D12 class N6 adenine-specific DNA methyltransferase Thit_0486 PF04556 DpnII restriction endonuclease Thit_0487 PF01555 DNA methylase Thit_0488 PF00733 Asparagine synthase Thit_0488 PF13537 Glutamine amidotransferase domain Thit_0491 PF07196 Flagellin hook IN motif Thit_0491 PF07195 Flagellar hook-associated protein 2 C-terminus Thit_0491 PF02465 Flagellar hook-associated protein 2 N-terminus Thit_0492 PF02561 Flagellar protein FliS Thit_0497 PF00158 Sigma-54 interaction domain Thit_0497 PF00874 PRD domain Thit_0497 PF03610 PTS system fructose IIA component Thit_0498 PF02378 Phosphotransferase system, EIIC Thit_0498 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0498 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0499 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0500 PF03611 PTS system sugar-specific permease component Thit_0501 PF00294 pfkB family carbohydrate kinase Thit_0502 PF00596 Class II Aldolase and Adducin N-terminal domain Thit_0505 PF01968 Hydantoinase/oxoprolinase Thit_0505 PF05378 Hydantoinase/oxoprolinase N-terminal region Thit_0506 PF00850 Histone deacetylase domain Thit_0507 PF02743 Cache domain Thit_0507 PF00672 HAMP domain Thit_0507 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Thit_0509 PF00497 Bacterial extracellular solute-binding proteins, family 3 Thit_0510 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0511 PF00005 ABC transporter Thit_0512 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Thit_0512 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Thit_0514 PF00072 Response regulator receiver domain Thit_0516 PF02829 3H domain Thit_0516 PF08279 HTH domain Thit_0518 PF07516 SecA Wing and Scaffold domain Thit_0518 PF01043 SecA preprotein cross-linking domain Thit_0518 PF07517 SecA DEAD-like domain Thit_0518 PF02810 SEC-C motif Thit_0520 PF17674 HHH domain Thit_0520 PF09371 Tex-like protein N-terminal domain Thit_0520 PF00575 S1 RNA binding domain Thit_0520 PF16921 Tex protein YqgF-like domain Thit_0523 PF08279 HTH domain Thit_0523 PF05043 Mga helix-turn-helix domain Thit_0523 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0523 PF00874 PRD domain Thit_0524 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0524 PF02378 Phosphotransferase system, EIIC Thit_0524 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0525 PF02378 Phosphotransferase system, EIIC Thit_0527 PF09261 Alpha mannosidase middle domain Thit_0527 PF07748 Glycosyl hydrolases family 38 C-terminal domain Thit_0527 PF01074 Glycosyl hydrolases family 38 N-terminal domain Thit_0528 PF09335 SNARE associated Golgi protein Thit_0529 PF01979 Amidohydrolase family Thit_0531 PF07690 Major Facilitator Superfamily Thit_0533 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Thit_0533 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Thit_0535 PF00696 Amino acid kinase family Thit_0536 PF12822 ECF transporter, substrate-specific component Thit_0537 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Thit_0538 PF00814 Glycoprotease family Thit_0540 PF00814 Glycoprotease family Thit_0541 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_0542 PF00005 ABC transporter Thit_0542 PF16326 ABC transporter C-terminal domain Thit_0542 PF12848 ABC transporter Thit_0543 PF01618 MotA/TolQ/ExbB proton channel family Thit_0544 PF13677 Membrane MotB of proton-channel complex MotA/MotB Thit_0544 PF00691 OmpA family Thit_0545 PF06971 Putative DNA-binding protein N-terminus Thit_0545 PF02629 CoA binding domain Thit_0547 PF00072 Response regulator receiver domain Thit_0547 PF04397 LytTr DNA-binding domain Thit_0548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0548 PF17203 Single cache domain 3 Thit_0548 PF00989 PAS fold Thit_0548 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Thit_0551 PF00175 Oxidoreductase NAD-binding domain Thit_0551 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Thit_0552 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_0552 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Thit_0555 PF04474 Protein of unknown function (DUF554) Thit_0557 PF00082 Subtilase family Thit_0560 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_0563 PF00166 Chaperonin 10 Kd subunit Thit_0564 PF00118 TCP-1/cpn60 chaperonin family Thit_0565 PF00478 IMP dehydrogenase / GMP reductase domain Thit_0565 PF00571 CBS domain Thit_0566 PF02540 NAD synthase Thit_0566 PF00958 GMP synthase C terminal domain Thit_0566 PF00117 Glutamine amidotransferase class-I Thit_0567 PF00860 Permease family Thit_0568 PF00731 AIR carboxylase Thit_0569 PF01259 SAICAR synthetase Thit_0570 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Thit_0572 PF02769 AIR synthase related protein, C-terminal domain Thit_0572 PF00586 AIR synthase related protein, N-terminal domain Thit_0572 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Thit_0573 PF00156 Phosphoribosyl transferase domain Thit_0574 PF00586 AIR synthase related protein, N-terminal domain Thit_0574 PF02769 AIR synthase related protein, C-terminal domain Thit_0575 PF00551 Formyl transferase Thit_0576 PF02142 MGS-like domain Thit_0576 PF01808 AICARFT/IMPCHase bienzyme Thit_0577 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Thit_0577 PF02844 Phosphoribosylglycinamide synthetase, N domain Thit_0577 PF02843 Phosphoribosylglycinamide synthetase, C domain Thit_0578 PF01177 Asp/Glu/Hydantoin racemase Thit_0579 PF07687 Peptidase dimerisation domain Thit_0579 PF01546 Peptidase family M20/M25/M40 Thit_0580 PF13936 Helix-turn-helix domain Thit_0581 PF01943 Polysaccharide biosynthesis protein Thit_0581 PF14667 Polysaccharide biosynthesis C-terminal domain Thit_0583 PF00874 PRD domain Thit_0583 PF08279 HTH domain Thit_0583 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0583 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_0583 PF05043 Mga helix-turn-helix domain Thit_0585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_0586 PF02378 Phosphotransferase system, EIIC Thit_0587 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Thit_0588 PF01371 Trp repressor protein Thit_0589 PF13361 UvrD-like helicase C-terminal domain Thit_0589 PF00580 UvrD/REP helicase N-terminal domain Thit_0590 PF01653 NAD-dependent DNA ligase adenylation domain Thit_0590 PF12826 Helix-hairpin-helix motif Thit_0590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Thit_0590 PF03120 NAD-dependent DNA ligase OB-fold domain Thit_0590 PF00533 BRCA1 C Terminus (BRCT) domain Thit_0591 PF02686 Glu-tRNAGln amidotransferase C subunit Thit_0592 PF01425 Amidase Thit_0593 PF02934 GatB/GatE catalytic domain Thit_0593 PF02637 GatB domain Thit_0595 PF04122 Putative cell wall binding repeat 2 Thit_0595 PF01520 N-acetylmuramoyl-L-alanine amidase Thit_0596 PF03725 3' exoribonuclease family, domain 2 Thit_0596 PF01138 3' exoribonuclease family, domain 1 Thit_0597 PF01725 Ham1 family Thit_0599 PF13936 Helix-turn-helix domain Thit_0600 PF08543 Phosphomethylpyrimidine kinase Thit_0601 PF02581 Thiamine monophosphate synthase Thit_0604 PF02110 Hydroxyethylthiazole kinase family Thit_0606 PF02110 Hydroxyethylthiazole kinase family Thit_0607 PF01895 PhoU domain Thit_0608 PF00005 ABC transporter Thit_0609 PF00005 ABC transporter Thit_0609 PF12399 Branched-chain amino acid ATP-binding cassette transporter Thit_0610 PF02653 Branched-chain amino acid transport system / permease component Thit_0610 PF11862 Domain of unknown function (DUF3382) Thit_0611 PF02653 Branched-chain amino acid transport system / permease component Thit_0612 PF13458 Periplasmic binding protein Thit_0615 PF00990 Diguanylate cyclase, GGDEF domain Thit_0615 PF08448 PAS fold Thit_0616 PF00486 Transcriptional regulatory protein, C terminal Thit_0616 PF00072 Response regulator receiver domain Thit_0617 PF05698 Bacterial trigger factor protein (TF) C-terminus Thit_0617 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Thit_0617 PF05697 Bacterial trigger factor protein (TF) Thit_0618 PF00574 Clp protease Thit_0619 PF07724 AAA domain (Cdc48 subfamily) Thit_0619 PF10431 C-terminal, D2-small domain, of ClpB protein Thit_0619 PF06689 ClpX C4-type zinc finger Thit_0620 PF02190 ATP-dependent protease La (LON) substrate-binding domain Thit_0620 PF00004 ATPase family associated with various cellular activities (AAA) Thit_0620 PF05362 Lon protease (S16) C-terminal proteolytic domain Thit_0621 PF01926 50S ribosome-binding GTPase Thit_0622 PF00119 ATP synthase A chain Thit_0623 PF00137 ATP synthase subunit C Thit_0624 PF00430 ATP synthase B/B' CF(0) Thit_0625 PF00213 ATP synthase delta (OSCP) subunit Thit_0626 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thit_0626 PF00306 ATP synthase alpha/beta chain, C terminal domain Thit_0626 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_0627 PF00231 ATP synthase Thit_0628 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thit_0628 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_0629 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Thit_0629 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Thit_0631 PF02540 NAD synthase Thit_0631 PF00795 Carbon-nitrogen hydrolase Thit_0632 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0633 PF00005 ABC transporter Thit_0637 PF01769 Divalent cation transporter Thit_0637 PF03448 MgtE intracellular N domain Thit_0637 PF00571 CBS domain Thit_0641 PF00672 HAMP domain Thit_0641 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Thit_0641 PF17202 Single cache domain 3 Thit_0644 PF00534 Glycosyl transferases group 1 Thit_0644 PF13439 Glycosyltransferase Family 4 Thit_0645 PF00534 Glycosyl transferases group 1 Thit_0645 PF13439 Glycosyltransferase Family 4 Thit_0646 PF00535 Glycosyl transferase family 2 Thit_0648 PF13936 Helix-turn-helix domain Thit_0649 PF03275 UDP-galactopyranose mutase Thit_0651 PF00534 Glycosyl transferases group 1 Thit_0651 PF13439 Glycosyltransferase Family 4 Thit_0652 PF16363 GDP-mannose 4,6 dehydratase Thit_0653 PF00483 Nucleotidyl transferase Thit_0654 PF04321 RmlD substrate binding domain Thit_0655 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Thit_0656 PF02397 Bacterial sugar transferase Thit_0657 PF01050 Mannose-6-phosphate isomerase Thit_0657 PF00483 Nucleotidyl transferase Thit_0661 PF12419 SNF2 Helicase protein Thit_0661 PF00176 SNF2 family N-terminal domain Thit_0661 PF00271 Helicase conserved C-terminal domain Thit_0665 PF16363 GDP-mannose 4,6 dehydratase Thit_0678 PF03477 ATP cone domain Thit_0680 PF12850 Calcineurin-like phosphoesterase superfamily domain Thit_0682 PF01566 Natural resistance-associated macrophage protein Thit_0684 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Thit_0701 PF00248 Aldo/keto reductase family Thit_0702 PF00465 Iron-containing alcohol dehydrogenase Thit_0703 PF00248 Aldo/keto reductase family Thit_0708 PF13411 MerR HTH family regulatory protein Thit_0710 PF03030 Inorganic H+ pyrophosphatase Thit_0712 PF01139 tRNA-splicing ligase RtcB Thit_0713 PF02357 Transcription termination factor nusG Thit_0713 PF00467 KOW motif Thit_0714 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Thit_0714 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Thit_0714 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Thit_0714 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thit_0715 PF00483 Nucleotidyl transferase Thit_0716 PF02706 Chain length determinant protein Thit_0716 PF13807 G-rich domain on putative tyrosine kinase Thit_0719 PF00690 Cation transporter/ATPase, N-terminus Thit_0719 PF00689 Cation transporting ATPase, C-terminus Thit_0720 PF00334 Nucleoside diphosphate kinase Thit_0721 PF07690 Major Facilitator Superfamily Thit_0722 PF10997 Alternate to MurJ Thit_0726 PF01066 CDP-alcohol phosphatidyltransferase Thit_0727 PF02540 NAD synthase Thit_0728 PF00731 AIR carboxylase Thit_0730 PF00989 PAS fold Thit_0730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0730 PF00512 His Kinase A (phospho-acceptor) domain Thit_0730 PF16736 Single Cache-like Thit_0731 PF00486 Transcriptional regulatory protein, C terminal Thit_0731 PF00072 Response regulator receiver domain Thit_0732 PF10925 Protein of unknown function (DUF2680) Thit_0733 PF02632 BioY family Thit_0735 PF00133 tRNA synthetases class I (I, L, M and V) Thit_0735 PF10458 Valyl tRNA synthetase tRNA binding arm Thit_0735 PF08264 Anticodon-binding domain of tRNA Thit_0737 PF08245 Mur ligase middle domain Thit_0737 PF02875 Mur ligase family, glutamate ligase domain Thit_0750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_0751 PF00269 Small, acid-soluble spore proteins, alpha/beta type Thit_0752 PF08331 Domain of unknown function (DUF1730) Thit_0753 PF00356 Bacterial regulatory proteins, lacI family Thit_0754 PF03632 Glycosyl hydrolase family 65 central catalytic domain Thit_0754 PF03633 Glycosyl hydrolase family 65, C-terminal domain Thit_0754 PF03636 Glycosyl hydrolase family 65, N-terminal domain Thit_0755 PF01547 Bacterial extracellular solute-binding protein Thit_0756 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0757 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0758 PF13419 Haloacid dehalogenase-like hydrolase Thit_0760 PF00356 Bacterial regulatory proteins, lacI family Thit_0761 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0762 PF00528 Binding-protein-dependent transport system inner membrane component Thit_0764 PF03632 Glycosyl hydrolase family 65 central catalytic domain Thit_0764 PF03633 Glycosyl hydrolase family 65, C-terminal domain Thit_0764 PF03636 Glycosyl hydrolase family 65, N-terminal domain Thit_0765 PF00082 Subtilase family Thit_0770 PF03610 PTS system fructose IIA component Thit_0770 PF00158 Sigma-54 interaction domain Thit_0770 PF00874 PRD domain Thit_0771 PF01471 Putative peptidoglycan binding domain Thit_0771 PF07486 Cell Wall Hydrolase Thit_0774 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Thit_0775 PF14602 Hexapeptide repeat of succinyl-transferase Thit_0775 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Thit_0775 PF00132 Bacterial transferase hexapeptide (six repeats) Thit_0776 PF01113 Dihydrodipicolinate reductase, N-terminus Thit_0776 PF05173 Dihydrodipicolinate reductase, C-terminus Thit_0777 PF00701 Dihydrodipicolinate synthetase family Thit_0778 PF01118 Semialdehyde dehydrogenase, NAD binding domain Thit_0778 PF02774 Semialdehyde dehydrogenase, dimerisation domain Thit_0780 PF00664 ABC transporter transmembrane region Thit_0780 PF00005 ABC transporter Thit_0781 PF00005 ABC transporter Thit_0781 PF00664 ABC transporter transmembrane region Thit_0783 PF00120 Glutamine synthetase, catalytic domain Thit_0783 PF03951 Glutamine synthetase, beta-Grasp domain Thit_0784 PF00072 Response regulator receiver domain Thit_0785 PF01979 Amidohydrolase family Thit_0786 PF00392 Bacterial regulatory proteins, gntR family Thit_0786 PF00155 Aminotransferase class I and II Thit_0788 PF01551 Peptidase family M23 Thit_0788 PF01476 LysM domain Thit_0788 PF08525 Opacity-associated protein A N-terminal motif Thit_0795 PF01343 Peptidase family S49 Thit_0797 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Thit_0797 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Thit_0798 PF04260 Protein of unknown function (DUF436) Thit_0799 PF13936 Helix-turn-helix domain Thit_0802 PF00005 ABC transporter Thit_0805 PF00704 Glycosyl hydrolases family 18 Thit_0805 PF01476 LysM domain Thit_0808 PF00324 Amino acid permease Thit_0809 PF08281 Sigma-70, region 4 Thit_0809 PF04542 Sigma-70 region 2 Thit_0811 PF00476 DNA polymerase family A Thit_0811 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Thit_0811 PF01367 5'-3' exonuclease, C-terminal SAM fold Thit_0812 PF01121 Dephospho-CoA kinase Thit_0813 PF01464 Transglycosylase SLT domain Thit_0817 PF00877 NlpC/P60 family Thit_0819 PF01464 Transglycosylase SLT domain Thit_0823 PF04060 Putative Fe-S cluster Thit_0827 PF00497 Bacterial extracellular solute-binding proteins, family 3 Thit_0827 PF00512 His Kinase A (phospho-acceptor) domain Thit_0827 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0829 PF00037 4Fe-4S binding domain Thit_0829 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Thit_0829 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Thit_0830 PF02256 Iron hydrogenase small subunit Thit_0830 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Thit_0830 PF02906 Iron only hydrogenase large subunit, C-terminal domain Thit_0830 PF00037 4Fe-4S binding domain Thit_0832 PF02545 Maf-like protein Thit_0833 PF04002 RadC-like JAB domain Thit_0837 PF03717 Penicillin-binding Protein dimerisation domain Thit_0837 PF00905 Penicillin binding protein transpeptidase domain Thit_0838 PF03775 Septum formation inhibitor MinC, C-terminal domain Thit_0839 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Thit_0840 PF03776 Septum formation topological specificity factor MinE Thit_0841 PF01098 Cell cycle protein Thit_0842 PF02142 MGS-like domain Thit_0843 PF01551 Peptidase family M23 Thit_0843 PF08525 Opacity-associated protein A N-terminal motif Thit_0843 PF01476 LysM domain Thit_0844 PF00571 CBS domain Thit_0844 PF02163 Peptidase family M50 Thit_0847 PF00575 S1 RNA binding domain Thit_0847 PF10150 Ribonuclease E/G family Thit_0848 PF14489 QueF-like protein Thit_0850 PF06305 Lipopolysaccharide assembly protein A domain Thit_0851 PF00829 Ribosomal prokaryotic L21 protein Thit_0853 PF01016 Ribosomal L27 protein Thit_0855 PF09269 Domain of unknown function (DUF1967) Thit_0855 PF01018 GTP1/OBG Thit_0855 PF01926 50S ribosome-binding GTPase Thit_0856 PF01467 Cytidylyltransferase-like Thit_0857 PF01966 HD domain Thit_0858 PF03816 Cell envelope-related transcriptional attenuator domain Thit_0861 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Thit_0861 PF02558 Ketopantoate reductase PanE/ApbA Thit_0863 PF13537 Glutamine amidotransferase domain Thit_0863 PF00733 Asparagine synthase Thit_0864 PF00768 D-alanyl-D-alanine carboxypeptidase Thit_0864 PF07943 Penicillin-binding protein 5, C-terminal domain Thit_0865 PF10531 SLBB domain Thit_0867 PF04608 Phosphatidylglycerophosphatase A Thit_0868 PF00749 tRNA synthetases class I (E and Q), catalytic domain Thit_0871 PF12838 4Fe-4S dicluster domain Thit_0872 PF01063 Amino-transferase class IV Thit_0875 PF07155 ECF-type riboflavin transporter, S component Thit_0877 PF12706 Beta-lactamase superfamily domain Thit_0877 PF00753 Metallo-beta-lactamase superfamily Thit_0878 PF13567 Domain of unknown function (DUF4131) Thit_0878 PF00753 Metallo-beta-lactamase superfamily Thit_0878 PF03772 Competence protein Thit_0880 PF01649 Ribosomal protein S20 Thit_0881 PF03169 OPT oligopeptide transporter protein Thit_0885 PF03418 Germination protease Thit_0888 PF13477 Glycosyl transferase 4-like Thit_0888 PF00534 Glycosyl transferases group 1 Thit_0890 PF14492 Elongation Factor G, domain II Thit_0890 PF00679 Elongation factor G C-terminus Thit_0890 PF00009 Elongation factor Tu GTP binding domain Thit_0890 PF06421 GTP-binding protein LepA C-terminus Thit_0890 PF03144 Elongation factor Tu domain 2 Thit_0891 PF06969 HemN C-terminal domain Thit_0891 PF04055 Radical SAM superfamily Thit_0892 PF01628 HrcA protein C terminal domain Thit_0893 PF01025 GrpE Thit_0894 PF00012 Hsp70 protein Thit_0895 PF00226 DnaJ domain Thit_0895 PF01556 DnaJ C terminal domain Thit_0895 PF00684 DnaJ central domain Thit_0897 PF04452 RNA methyltransferase Thit_0899 PF05167 Uncharacterised ACR (DUF711) Thit_0901 PF03773 Predicted permease Thit_0904 PF00072 Response regulator receiver domain Thit_0904 PF00486 Transcriptional regulatory protein, C terminal Thit_0905 PF00512 His Kinase A (phospho-acceptor) domain Thit_0905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0905 PF00672 HAMP domain Thit_0906 PF00483 Nucleotidyl transferase Thit_0910 PF04138 GtrA-like protein Thit_0912 PF01938 TRAM domain Thit_0912 PF00919 Uncharacterized protein family UPF0004 Thit_0912 PF04055 Radical SAM superfamily Thit_0913 PF01230 HIT domain Thit_0914 PF01165 Ribosomal protein S21 Thit_0916 PF07873 YabP family Thit_0917 PF06898 Putative stage IV sporulation protein YqfD Thit_0918 PF02562 PhoH-like protein Thit_0919 PF07698 7TM receptor with intracellular HD hydrolase Thit_0919 PF01966 HD domain Thit_0919 PF07697 7TM-HD extracellular Thit_0920 PF02130 Uncharacterized protein family UPF0054 Thit_0921 PF01219 Prokaryotic diacylglycerol kinase Thit_0922 PF07650 KH domain Thit_0922 PF01926 50S ribosome-binding GTPase Thit_0923 PF01791 DeoC/LacD family aldolase Thit_0924 PF02565 Recombination protein O C terminal Thit_0924 PF11967 Recombination protein O N terminal Thit_0926 PF03129 Anticodon binding domain Thit_0926 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thit_0928 PF03618 Kinase/pyrophosphorylase Thit_0929 PF02896 PEP-utilising enzyme, TIM barrel domain Thit_0929 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Thit_0929 PF00391 PEP-utilising enzyme, mobile domain Thit_0931 PF00575 S1 RNA binding domain Thit_0931 PF00773 RNB domain Thit_0931 PF08206 Ribonuclease B OB domain Thit_0931 PF17876 Cold shock domain Thit_0932 PF01668 SmpB protein Thit_0939 PF04055 Radical SAM superfamily Thit_0940 PF00005 ABC transporter Thit_0947 PF01470 Pyroglutamyl peptidase Thit_0949 PF01965 DJ-1/PfpI family Thit_0950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Thit_0950 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_0955 PF01661 Macro domain Thit_0956 PF02673 Bacitracin resistance protein BacA Thit_0958 PF14098 Small, acid-soluble spore protein I Thit_0961 PF00753 Metallo-beta-lactamase superfamily Thit_0961 PF00258 Flavodoxin Thit_0962 PF01451 Low molecular weight phosphotyrosine protein phosphatase Thit_0964 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Thit_0964 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Thit_0965 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Thit_0965 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Thit_0966 PF04199 Putative cyclase Thit_0968 PF03315 Serine dehydratase beta chain Thit_0969 PF03313 Serine dehydratase alpha chain Thit_0970 PF08439 Oligopeptidase F Thit_0970 PF01432 Peptidase family M3 Thit_0971 PF01761 3-dehydroquinate synthase Thit_0972 PF00800 Prephenate dehydratase Thit_0972 PF01817 Chorismate mutase type II Thit_0972 PF01842 ACT domain Thit_0973 PF00793 DAHP synthetase I family Thit_0973 PF18152 DAHP synthase ferredoxin-like domain Thit_0974 PF02153 Prephenate dehydrogenase Thit_0974 PF01842 ACT domain Thit_0975 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Thit_0977 PF07486 Cell Wall Hydrolase Thit_0977 PF01471 Putative peptidoglycan binding domain Thit_0978 PF01169 Uncharacterized protein family UPF0016 Thit_0981 PF00072 Response regulator receiver domain Thit_0981 PF00486 Transcriptional regulatory protein, C terminal Thit_0982 PF00672 HAMP domain Thit_0982 PF00512 His Kinase A (phospho-acceptor) domain Thit_0982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_0984 PF00480 ROK family Thit_0985 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Thit_0987 PF02683 Cytochrome C biogenesis protein transmembrane region Thit_0988 PF00578 AhpC/TSA family Thit_0989 PF01276 Orn/Lys/Arg decarboxylase, major domain Thit_0989 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Thit_0990 PF13936 Helix-turn-helix domain Thit_0993 PF01926 50S ribosome-binding GTPase Thit_0993 PF13167 GTP-binding GTPase N-terminal Thit_0993 PF16360 GTP-binding GTPase Middle Region Thit_0996 PF01205 Uncharacterized protein family UPF0029 Thit_0996 PF09186 Domain of unknown function (DUF1949) Thit_1000 PF00291 Pyridoxal-phosphate dependent enzyme Thit_1001 PF01709 Transcriptional regulator Thit_1002 PF01584 CheW-like domain Thit_1004 PF02075 Crossover junction endodeoxyribonuclease RuvC Thit_1005 PF07499 RuvA, C-terminal domain Thit_1005 PF01330 RuvA N terminal domain Thit_1006 PF17864 RuvB AAA lid domain Thit_1006 PF05491 RuvB C-terminal winged helix domain Thit_1006 PF05496 Holliday junction DNA helicase RuvB P-loop domain Thit_1008 PF08486 Stage II sporulation protein Thit_1008 PF04122 Putative cell wall binding repeat 2 Thit_1009 PF02547 Queuosine biosynthesis protein Thit_1010 PF01702 Queuine tRNA-ribosyltransferase Thit_1015 PF00132 Bacterial transferase hexapeptide (six repeats) Thit_1016 PF02355 Protein export membrane protein Thit_1016 PF07549 SecD/SecF GG Motif Thit_1017 PF07549 SecD/SecF GG Motif Thit_1017 PF02355 Protein export membrane protein Thit_1018 PF03109 ABC1 family Thit_1019 PF17768 RecJ OB domain Thit_1019 PF02272 DHHA1 domain Thit_1019 PF01368 DHH family Thit_1019 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Thit_1020 PF00156 Phosphoribosyl transferase domain Thit_1021 PF02824 TGS domain Thit_1021 PF13291 ACT domain Thit_1021 PF04607 Region found in RelA / SpoT proteins Thit_1022 PF02580 D-Tyr-tRNA(Tyr) deacylase Thit_1023 PF00753 Metallo-beta-lactamase superfamily Thit_1024 PF02687 FtsX-like permease family Thit_1024 PF12704 MacB-like periplasmic core domain Thit_1025 PF00005 ABC transporter Thit_1026 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Thit_1029 PF00872 Transposase, Mutator family Thit_1031 PF03129 Anticodon binding domain Thit_1031 PF13393 Histidyl-tRNA synthetase Thit_1032 PF00152 tRNA synthetases class II (D, K and N) Thit_1032 PF01336 OB-fold nucleic acid binding domain Thit_1032 PF02938 GAD domain Thit_1033 PF00899 ThiF family Thit_1034 PF02583 Metal-sensitive transcriptional repressor Thit_1035 PF00085 Thioredoxin Thit_1037 PF01168 Alanine racemase, N-terminal domain Thit_1038 PF02082 Transcriptional regulator Thit_1040 PF01594 AI-2E family transporter Thit_1041 PF02272 DHHA1 domain Thit_1041 PF01411 tRNA synthetases class II (A) Thit_1041 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Thit_1042 PF06135 IreB regulatory phosphoprotein Thit_1043 PF03652 Holliday junction resolvase Thit_1044 PF06949 Protein of unknown function (DUF1292) Thit_1045 PF01475 Ferric uptake regulator family Thit_1046 PF00753 Metallo-beta-lactamase superfamily Thit_1046 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Thit_1046 PF17770 Ribonuclease J C-terminal domain Thit_1047 PF06133 Control of competence regulator ComK, YlbF/YmcA Thit_1049 PF02618 YceG-like family Thit_1052 PF03717 Penicillin-binding Protein dimerisation domain Thit_1052 PF00905 Penicillin binding protein transpeptidase domain Thit_1053 PF04545 Sigma-70, region 4 Thit_1053 PF04542 Sigma-70 region 2 Thit_1055 PF08501 Shikimate dehydrogenase substrate binding domain Thit_1055 PF01488 Shikimate / quinate 5-dehydrogenase Thit_1056 PF00437 Type II/IV secretion system protein Thit_1057 PF00437 Type II/IV secretion system protein Thit_1058 PF00482 Type II secretion system (T2SS), protein F Thit_1059 PF07963 Prokaryotic N-terminal methylation motif Thit_1059 PF08334 Type II secretion system (T2SS), protein G Thit_1060 PF01478 Type IV leader peptidase family Thit_1060 PF06750 Bacterial Peptidase A24 N-terminal domain Thit_1069 PF01202 Shikimate kinase Thit_1071 PF00696 Amino acid kinase family Thit_1071 PF01472 PUA domain Thit_1072 PF00171 Aldehyde dehydrogenase family Thit_1073 PF01220 Dehydroquinase class II Thit_1074 PF01321 Creatinase/Prolidase N-terminal domain Thit_1074 PF00557 Metallopeptidase family M24 Thit_1075 PF08207 Elongation factor P (EF-P) KOW-like domain Thit_1075 PF01132 Elongation factor P (EF-P) OB domain Thit_1075 PF09285 Elongation factor P, C-terminal Thit_1079 PF06686 Stage III sporulation protein AC/AD protein family Thit_1080 PF06686 Stage III sporulation protein AC/AD protein family Thit_1081 PF09546 Stage III sporulation protein AE (spore_III_AE) Thit_1082 PF09581 Stage III sporulation protein AF (Spore_III_AF) Thit_1085 PF03780 Asp23 family, cell envelope-related function Thit_1086 PF01029 NusB family Thit_1087 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Thit_1087 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Thit_1088 PF13742 OB-fold nucleic acid binding domain Thit_1088 PF02601 Exonuclease VII, large subunit Thit_1089 PF02609 Exonuclease VII small subunit Thit_1090 PF00348 Polyprenyl synthetase Thit_1092 PF02779 Transketolase, pyrimidine binding domain Thit_1092 PF02780 Transketolase, C-terminal domain Thit_1092 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Thit_1093 PF01728 FtsJ-like methyltransferase Thit_1093 PF01479 S4 domain Thit_1094 PF01513 ATP-NAD kinase Thit_1095 PF01316 Arginine repressor, DNA binding domain Thit_1095 PF02863 Arginine repressor, C-terminal domain Thit_1096 PF02463 RecF/RecN/SMC N terminal domain Thit_1097 PF17820 PDZ domain Thit_1097 PF05580 SpoIVB peptidase S55 Thit_1098 PF08769 Sporulation initiation factor Spo0A C terminal Thit_1098 PF00072 Response regulator receiver domain Thit_1101 PF00535 Glycosyl transferase family 2 Thit_1105 PF00293 NUDIX domain Thit_1107 PF01944 Stage II sporulation protein M Thit_1108 PF00589 Phage integrase family Thit_1108 PF02899 Phage integrase, N-terminal SAM-like domain Thit_1109 PF07943 Penicillin-binding protein 5, C-terminal domain Thit_1109 PF00768 D-alanyl-D-alanine carboxypeptidase Thit_1110 PF01740 STAS domain Thit_1111 PF13581 Histidine kinase-like ATPase domain Thit_1112 PF04539 Sigma-70 region 3 Thit_1112 PF04545 Sigma-70, region 4 Thit_1112 PF04542 Sigma-70 region 2 Thit_1113 PF07311 Dodecin Thit_1114 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Thit_1116 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Thit_1117 PF01966 HD domain Thit_1117 PF01743 Poly A polymerase head domain Thit_1117 PF12627 Probable RNA and SrmB- binding site of polymerase A Thit_1118 PF02163 Peptidase family M50 Thit_1119 PF02616 Segregation and condensation protein ScpA Thit_1120 PF04079 Segregation and condensation complex subunit ScpB Thit_1121 PF06207 Protein of unknown function (DUF1002) Thit_1123 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Thit_1124 PF07943 Penicillin-binding protein 5, C-terminal domain Thit_1124 PF00768 D-alanyl-D-alanine carboxypeptidase Thit_1126 PF13932 GidA associated domain Thit_1126 PF01134 Glucose inhibited division protein A Thit_1127 PF01479 S4 domain Thit_1127 PF00849 RNA pseudouridylate synthase Thit_1129 PF17284 Spermidine synthase tetramerisation domain Thit_1130 PF00491 Arginase family Thit_1131 PF00682 HMGL-like Thit_1131 PF00364 Biotin-requiring enzyme Thit_1131 PF02436 Conserved carboxylase domain Thit_1132 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Thit_1132 PF01476 LysM domain Thit_1136 PF01975 Survival protein SurE Thit_1138 PF01418 Helix-turn-helix domain, rpiR family Thit_1138 PF01380 SIS domain Thit_1139 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Thit_1139 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thit_1141 PF00300 Histidine phosphatase superfamily (branch 1) Thit_1144 PF07736 Chorismate mutase type I Thit_1145 PF02224 Cytidylate kinase Thit_1147 PF02401 LytB protein Thit_1149 PF02675 S-adenosylmethionine decarboxylase Thit_1150 PF01739 CheR methyltransferase, SAM binding domain Thit_1150 PF03705 CheR methyltransferase, all-alpha domain Thit_1151 PF04055 Radical SAM superfamily Thit_1151 PF01938 TRAM domain Thit_1151 PF00919 Uncharacterized protein family UPF0004 Thit_1152 PF01624 MutS domain I Thit_1152 PF00488 MutS domain V Thit_1152 PF05190 MutS family domain IV Thit_1152 PF05192 MutS domain III Thit_1152 PF05188 MutS domain II Thit_1153 PF08676 MutL C terminal dimerisation domain Thit_1153 PF01119 DNA mismatch repair protein, C-terminal domain Thit_1155 PF17209 Hfq protein Thit_1156 PF03807 NADP oxidoreductase coenzyme F420-dependent Thit_1156 PF14748 Pyrroline-5-carboxylate reductase dimerisation Thit_1157 PF00075 RNase H Thit_1158 PF00589 Phage integrase family Thit_1158 PF02899 Phage integrase, N-terminal SAM-like domain Thit_1159 PF06838 Methionine gamma-lyase Thit_1160 PF00004 ATPase family associated with various cellular activities (AAA) Thit_1160 PF17866 AAA lid domain Thit_1161 PF00206 Lyase Thit_1161 PF10397 Adenylosuccinate lyase C-terminus Thit_1162 PF00155 Aminotransferase class I and II Thit_1163 PF02811 PHP domain Thit_1164 PF04232 Stage V sporulation protein S (SpoVS) Thit_1165 PF13277 YmdB-like protein Thit_1166 PF00013 KH domain Thit_1166 PF01966 HD domain Thit_1166 PF12072 Domain of unknown function (DUF3552) Thit_1167 PF02631 RecX family Thit_1168 PF00154 recA bacterial DNA recombination protein Thit_1169 PF18146 Damage-inducible protein CinA KH domain Thit_1169 PF00994 Probable molybdopterin binding domain Thit_1169 PF02464 Competence-damaged protein Thit_1170 PF01066 CDP-alcohol phosphatidyltransferase Thit_1171 PF00919 Uncharacterized protein family UPF0004 Thit_1171 PF18693 TRAM domain Thit_1171 PF04055 Radical SAM superfamily Thit_1172 PF17854 FtsK alpha domain Thit_1172 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Thit_1172 PF01580 FtsK/SpoIIIE family Thit_1172 PF09397 Ftsk gamma domain Thit_1174 PF00574 Clp protease Thit_1175 PF13840 ACT domain Thit_1175 PF00696 Amino acid kinase family Thit_1177 PF00692 dUTPase Thit_1178 PF05193 Peptidase M16 inactive domain Thit_1178 PF00675 Insulinase (Peptidase family M16) Thit_1180 PF01522 Polysaccharide deacetylase Thit_1181 PF01138 3' exoribonuclease family, domain 1 Thit_1181 PF03725 3' exoribonuclease family, domain 2 Thit_1181 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Thit_1181 PF00575 S1 RNA binding domain Thit_1181 PF00013 KH domain Thit_1182 PF00312 Ribosomal protein S15 Thit_1183 PF06574 FAD synthetase Thit_1183 PF01687 Riboflavin kinase Thit_1184 PF01509 TruB family pseudouridylate synthase (N terminal domain) Thit_1184 PF16198 tRNA pseudouridylate synthase B C-terminal domain Thit_1184 PF09157 Pseudouridine synthase II TruB, C-terminal Thit_1185 PF01368 DHH family Thit_1185 PF02272 DHHA1 domain Thit_1186 PF02033 Ribosome-binding factor A Thit_1187 PF00009 Elongation factor Tu GTP binding domain Thit_1187 PF11987 Translation-initiation factor 2 Thit_1187 PF04760 Translation initiation factor IF-2, N-terminal region Thit_1189 PF04296 Protein of unknown function (DUF448) Thit_1190 PF13184 NusA-like KH domain Thit_1190 PF00575 S1 RNA binding domain Thit_1190 PF08529 NusA N-terminal domain Thit_1191 PF02576 RimP N-terminal domain Thit_1191 PF17384 RimP C-terminal SH3 domain Thit_1192 PF11490 DNA polymerase III polC-type N-terminus II Thit_1192 PF00929 Exonuclease Thit_1192 PF07733 Bacterial DNA polymerase III alpha NTPase domain Thit_1192 PF02811 PHP domain Thit_1192 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Thit_1192 PF14579 Helix-hairpin-helix motif Thit_1193 PF00535 Glycosyl transferase family 2 Thit_1194 PF04551 GcpE protein Thit_1195 PF02163 Peptidase family M50 Thit_1195 PF17820 PDZ domain Thit_1196 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Thit_1196 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Thit_1196 PF13288 DXP reductoisomerase C-terminal domain Thit_1198 PF01255 Putative undecaprenyl diphosphate synthase Thit_1200 PF01765 Ribosome recycling factor Thit_1201 PF00696 Amino acid kinase family Thit_1202 PF00889 Elongation factor TS Thit_1203 PF00318 Ribosomal protein S2 Thit_1206 PF04542 Sigma-70 region 2 Thit_1206 PF04545 Sigma-70, region 4 Thit_1206 PF04539 Sigma-70 region 3 Thit_1207 PF03975 CheD chemotactic sensory transduction Thit_1208 PF04509 CheC-like family Thit_1209 PF01584 CheW-like domain Thit_1210 PF01584 CheW-like domain Thit_1210 PF07194 P2 response regulator binding domain Thit_1210 PF01627 Hpt domain Thit_1210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_1210 PF02895 Signal transducing histidine kinase, homodimeric domain Thit_1211 PF00072 Response regulator receiver domain Thit_1211 PF01339 CheB methylesterase Thit_1213 PF10609 NUBPL iron-transfer P-loop NTPase Thit_1214 PF00448 SRP54-type protein, GTPase domain Thit_1215 PF00771 FHIPEP family Thit_1216 PF01312 FlhB HrpN YscU SpaS Family Thit_1217 PF01311 Bacterial export proteins, family 1 Thit_1218 PF01313 Bacterial export proteins, family 3 Thit_1219 PF00813 FliP family Thit_1221 PF00072 Response regulator receiver domain Thit_1222 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Thit_1222 PF04509 CheC-like family Thit_1223 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Thit_1223 PF02154 Flagellar motor switch protein FliM Thit_1224 PF03748 Flagellar basal body-associated protein FliL Thit_1225 PF06289 Flagellar and Swarming motility proteins Thit_1226 PF07559 Flagellar basal body protein FlaE Thit_1226 PF00460 Flagella basal body rod protein Thit_1226 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Thit_1228 PF03963 Flagellar hook capping protein - N-terminal region Thit_1232 PF18269 T3SS EscN ATPase C-terminal domain Thit_1232 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thit_1232 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_1236 PF08345 Flagellar M-ring protein C-terminal Thit_1236 PF01514 Secretory protein of YscJ/FliF family Thit_1237 PF02049 Flagellar hook-basal body complex protein FliE Thit_1238 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Thit_1238 PF00460 Flagella basal body rod protein Thit_1239 PF00460 Flagella basal body rod protein Thit_1240 PF08222 CodY helix-turn-helix domain Thit_1240 PF06018 CodY GAF-like domain Thit_1241 PF10431 C-terminal, D2-small domain, of ClpB protein Thit_1241 PF07724 AAA domain (Cdc48 subfamily) Thit_1241 PF00004 ATPase family associated with various cellular activities (AAA) Thit_1242 PF00227 Proteasome subunit Thit_1243 PF01131 DNA topoisomerase Thit_1243 PF01396 Topoisomerase DNA binding C4 zinc finger Thit_1243 PF01751 Toprim domain Thit_1244 PF02481 DNA recombination-mediator protein A Thit_1245 PF01351 Ribonuclease HII Thit_1246 PF02021 Uncharacterised protein family UPF0102 Thit_1247 PF00579 tRNA synthetases class I (W and Y) Thit_1248 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Thit_1248 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Thit_1249 PF13335 Magnesium chelatase, subunit ChlI C-terminal Thit_1249 PF01078 Magnesium chelatase, subunit ChlI Thit_1250 PF01926 50S ribosome-binding GTPase Thit_1251 PF01245 Ribosomal protein L19 Thit_1252 PF01746 tRNA (Guanine-1)-methyltransferase Thit_1253 PF05239 PRC-barrel domain Thit_1253 PF01782 RimM N-terminal domain Thit_1255 PF00886 Ribosomal protein S16 Thit_1256 PF02978 Signal peptide binding domain Thit_1256 PF00448 SRP54-type protein, GTPase domain Thit_1256 PF02881 SRP54-type protein, helical bundle domain Thit_1257 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Thit_1258 PF02881 SRP54-type protein, helical bundle domain Thit_1258 PF00448 SRP54-type protein, GTPase domain Thit_1259 PF02463 RecF/RecN/SMC N terminal domain Thit_1259 PF06470 SMC proteins Flexible Hinge Domain Thit_1261 PF04232 Stage V sporulation protein S (SpoVS) Thit_1263 PF01174 SNO glutamine amidotransferase family Thit_1264 PF01680 SOR/SNZ family Thit_1265 PF04055 Radical SAM superfamily Thit_1265 PF06968 Biotin and Thiamin Synthesis associated domain Thit_1268 PF13247 4Fe-4S dicluster domain Thit_1268 PF00037 4Fe-4S binding domain Thit_1269 PF01645 Conserved region in glutamate synthase Thit_1269 PF13187 4Fe-4S dicluster domain Thit_1270 PF00310 Glutamine amidotransferases class-II Thit_1271 PF00117 Glutamine amidotransferase class-I Thit_1273 PF00543 Nitrogen regulatory protein P-II Thit_1274 PF00909 Ammonium Transporter Family Thit_1275 PF12437 Glutamine synthetase type III N terminal Thit_1275 PF18318 Glutamine synthetase C-terminal domain Thit_1275 PF00120 Glutamine synthetase, catalytic domain Thit_1277 PF00035 Double-stranded RNA binding motif Thit_1277 PF14622 Ribonuclease-III-like Thit_1278 PF02801 Beta-ketoacyl synthase, C-terminal domain Thit_1278 PF00109 Beta-ketoacyl synthase, N-terminal domain Thit_1279 PF00550 Phosphopantetheine attachment site Thit_1281 PF00698 Acyl transferase domain Thit_1282 PF03060 Nitronate monooxygenase Thit_1283 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thit_1283 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Thit_1284 PF02504 Fatty acid synthesis protein Thit_1286 PF01783 Ribosomal L32p protein family Thit_1287 PF02620 Large ribosomal RNA subunit accumulation protein YceD Thit_1288 PF00871 Acetokinase family Thit_1289 PF01515 Phosphate acetyl/butaryl transferase Thit_1290 PF05636 HIGH Nucleotidyl Transferase Thit_1291 PF07670 Nucleoside recognition Thit_1293 PF01467 Cytidylyltransferase-like Thit_1295 PF00269 Small, acid-soluble spore proteins, alpha/beta type Thit_1296 PF00269 Small, acid-soluble spore proteins, alpha/beta type Thit_1297 PF02645 Uncharacterised protein, DegV family COG1307 Thit_1298 PF17191 RecG wedge domain Thit_1298 PF00270 DEAD/DEAH box helicase Thit_1298 PF00271 Helicase conserved C-terminal domain Thit_1299 PF02734 DAK2 domain Thit_1299 PF13684 Dihydroxyacetone kinase family Thit_1300 PF03780 Asp23 family, cell envelope-related function Thit_1301 PF00830 Ribosomal L28 family Thit_1304 PF00834 Ribulose-phosphate 3 epimerase family Thit_1305 PF03193 RsgA GTPase Thit_1305 PF16745 RsgA N-terminal domain Thit_1306 PF03793 PASTA domain Thit_1306 PF00069 Protein kinase domain Thit_1308 PF04055 Radical SAM superfamily Thit_1309 PF01029 NusB family Thit_1309 PF01189 16S rRNA methyltransferase RsmB/F Thit_1310 PF04298 Putative neutral zinc metallopeptidase Thit_1312 PF00551 Formyl transferase Thit_1312 PF02911 Formyl transferase, C-terminal domain Thit_1313 PF01327 Polypeptide deformylase Thit_1315 PF04851 Type III restriction enzyme, res subunit Thit_1315 PF00271 Helicase conserved C-terminal domain Thit_1315 PF17764 3′ DNA-binding domain (3′BD) Thit_1315 PF18074 Primosomal protein N C-terminal domain Thit_1315 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Thit_1316 PF02441 Flavoprotein Thit_1316 PF04127 DNA / pantothenate metabolism flavoprotein Thit_1317 PF01192 RNA polymerase Rpb6 Thit_1318 PF00625 Guanylate kinase Thit_1319 PF04025 Domain of unknown function (DUF370) Thit_1320 PF08340 Domain of unknown function (DUF1732) Thit_1320 PF03755 YicC-like family, N-terminal region Thit_1321 PF01678 Diaminopimelate epimerase Thit_1322 PF07690 Major Facilitator Superfamily Thit_1322 PF00083 Sugar (and other) transporter Thit_1327 PF00005 ABC transporter Thit_1327 PF09383 NIL domain Thit_1328 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1329 PF03180 NLPA lipoprotein Thit_1331 PF01171 PP-loop family Thit_1332 PF17785 PUA-like domain Thit_1332 PF10672 S-adenosylmethionine-dependent methyltransferase Thit_1333 PF01510 N-acetylmuramoyl-L-alanine amidase Thit_1333 PF01471 Putative peptidoglycan binding domain Thit_1334 PF00156 Phosphoribosyl transferase domain Thit_1335 PF01180 Dihydroorotate dehydrogenase Thit_1336 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Thit_1337 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Thit_1338 PF01979 Amidohydrolase family Thit_1339 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Thit_1339 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Thit_1340 PF00156 Phosphoribosyl transferase domain Thit_1341 PF00586 AIR synthase related protein, N-terminal domain Thit_1341 PF02769 AIR synthase related protein, C-terminal domain Thit_1341 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Thit_1342 PF00849 RNA pseudouridylate synthase Thit_1342 PF01479 S4 domain Thit_1343 PF01252 Signal peptidase (SPase) II Thit_1354 PF03787 RAMP superfamily Thit_1359 PF01741 Large-conductance mechanosensitive channel, MscL Thit_1361 PF08281 Sigma-70, region 4 Thit_1361 PF04542 Sigma-70 region 2 Thit_1364 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_1365 PF00589 Phage integrase family Thit_1367 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_1369 PF01520 N-acetylmuramoyl-L-alanine amidase Thit_1369 PF05036 Sporulation related domain Thit_1395 PF04466 Phage terminase large subunit Thit_1395 PF17288 Terminase RNAseH like domain Thit_1402 PF04545 Sigma-70, region 4 Thit_1402 PF00140 Sigma-70 factor, region 1.2 Thit_1402 PF04542 Sigma-70 region 2 Thit_1402 PF03979 Sigma-70 factor, region 1.1 Thit_1402 PF04539 Sigma-70 region 3 Thit_1404 PF01695 IstB-like ATP binding protein Thit_1406 PF03837 RecT family Thit_1407 PF09588 YqaJ-like viral recombinase domain Thit_1413 PF01381 Helix-turn-helix Thit_1417 PF04024 PspC domain Thit_1421 PF01053 Cys/Met metabolism PLP-dependent enzyme Thit_1424 PF00290 Tryptophan synthase alpha chain Thit_1425 PF00291 Pyridoxal-phosphate dependent enzyme Thit_1426 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Thit_1427 PF00218 Indole-3-glycerol phosphate synthase Thit_1428 PF00591 Glycosyl transferase family, a/b domain Thit_1428 PF02885 Glycosyl transferase family, helical bundle domain Thit_1429 PF00117 Glutamine amidotransferase class-I Thit_1429 PF02885 Glycosyl transferase family, helical bundle domain Thit_1429 PF00591 Glycosyl transferase family, a/b domain Thit_1431 PF01910 Thiamine-binding protein Thit_1432 PF01053 Cys/Met metabolism PLP-dependent enzyme Thit_1433 PF01048 Phosphorylase superfamily Thit_1434 PF01008 Initiation factor 2 subunit family Thit_1435 PF00596 Class II Aldolase and Adducin N-terminal domain Thit_1438 PF01979 Amidohydrolase family Thit_1439 PF06827 Zinc finger found in FPG and IleRS Thit_1439 PF08264 Anticodon-binding domain of tRNA Thit_1439 PF00133 tRNA synthetases class I (I, L, M and V) Thit_1441 PF05103 DivIVA protein Thit_1442 PF17774 Putative RNA-binding domain in YlmH Thit_1442 PF01479 S4 domain Thit_1444 PF04472 Cell division protein SepF Thit_1445 PF01168 Alanine racemase, N-terminal domain Thit_1447 PF01042 Endoribonuclease L-PSP Thit_1448 PF02447 GntP family permease Thit_1449 PF02595 Glycerate kinase family Thit_1450 PF13556 PucR C-terminal helix-turn-helix domain Thit_1450 PF17853 GGDEF-like domain Thit_1450 PF05651 Putative sugar diacid recognition Thit_1453 PF09547 Stage IV sporulation protein A (spore_IV_A) Thit_1454 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Thit_1454 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Thit_1455 PF02660 Glycerol-3-phosphate acyltransferase Thit_1456 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Thit_1456 PF01926 50S ribosome-binding GTPase Thit_1461 PF14045 YIEGIA protein Thit_1464 PF01895 PhoU domain Thit_1465 PF00005 ABC transporter Thit_1466 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1467 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1468 PF12849 PBP superfamily domain Thit_1469 PF00989 PAS fold Thit_1469 PF00512 His Kinase A (phospho-acceptor) domain Thit_1469 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_1469 PF16736 Single Cache-like Thit_1470 PF00486 Transcriptional regulatory protein, C terminal Thit_1470 PF00072 Response regulator receiver domain Thit_1471 PF03477 ATP cone domain Thit_1472 PF05239 PRC-barrel domain Thit_1473 PF04539 Sigma-70 region 3 Thit_1473 PF04545 Sigma-70, region 4 Thit_1473 PF04542 Sigma-70 region 2 Thit_1474 PF04542 Sigma-70 region 2 Thit_1474 PF04545 Sigma-70, region 4 Thit_1475 PF03419 Sporulation factor SpoIIGA Thit_1476 PF00091 Tubulin/FtsZ family, GTPase domain Thit_1476 PF12327 FtsZ family, C-terminal domain Thit_1477 PF02491 SHS2 domain inserted in FTSA Thit_1478 PF06947 Protein of unknown function (DUF1290) Thit_1479 PF05949 Bacterial protein of unknown function (DUF881) Thit_1481 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Thit_1482 PF03033 Glycosyltransferase family 28 N-terminal domain Thit_1482 PF04101 Glycosyltransferase family 28 C-terminal domain Thit_1483 PF01098 Cell cycle protein Thit_1484 PF08245 Mur ligase middle domain Thit_1484 PF02875 Mur ligase family, glutamate ligase domain Thit_1485 PF00953 Glycosyl transferase family 4 Thit_1485 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Thit_1486 PF08245 Mur ligase middle domain Thit_1486 PF01225 Mur ligase family, catalytic domain Thit_1486 PF02875 Mur ligase family, glutamate ligase domain Thit_1487 PF02875 Mur ligase family, glutamate ligase domain Thit_1487 PF08245 Mur ligase middle domain Thit_1487 PF01225 Mur ligase family, catalytic domain Thit_1488 PF03717 Penicillin-binding Protein dimerisation domain Thit_1488 PF00905 Penicillin binding protein transpeptidase domain Thit_1488 PF03793 PASTA domain Thit_1490 PF01795 MraW methylase family Thit_1491 PF02381 MraZ protein, putative antitoxin-like Thit_1492 PF00675 Insulinase (Peptidase family M16) Thit_1492 PF05193 Peptidase M16 inactive domain Thit_1493 PF05193 Peptidase M16 inactive domain Thit_1494 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) Thit_1495 PF01926 50S ribosome-binding GTPase Thit_1495 PF06071 Protein of unknown function (DUF933) Thit_1497 PF02568 Thiamine biosynthesis protein (ThiI) Thit_1497 PF02926 THUMP domain Thit_1498 PF00266 Aminotransferase class-V Thit_1499 PF02583 Metal-sensitive transcriptional repressor Thit_1502 PF04055 Radical SAM superfamily Thit_1503 PF03099 Biotin/lipoate A/B protein ligase family Thit_1504 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_1504 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thit_1507 PF00188 Cysteine-rich secretory protein family Thit_1508 PF02127 Aminopeptidase I zinc metalloprotease (M18) Thit_1509 PF00196 Bacterial regulatory proteins, luxR family Thit_1509 PF00072 Response regulator receiver domain Thit_1510 PF05384 Sensor protein DegS Thit_1510 PF07730 Histidine kinase Thit_1510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_1512 PF04463 Protein of unknown function (DUF523) Thit_1513 PF01713 Smr domain Thit_1513 PF00488 MutS domain V Thit_1514 PF12392 Collagenase Thit_1514 PF01136 Peptidase family U32 Thit_1516 PF03483 B3/4 domain Thit_1516 PF01588 Putative tRNA binding domain Thit_1516 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Thit_1516 PF03484 tRNA synthetase B5 domain Thit_1516 PF03147 Ferredoxin-fold anticodon binding domain Thit_1517 PF01409 tRNA synthetases class II core domain (F) Thit_1517 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Thit_1518 PF08032 RNA 2'-O ribose methyltransferase substrate binding Thit_1518 PF00588 SpoU rRNA Methylase family Thit_1519 PF00453 Ribosomal protein L20 Thit_1520 PF01632 Ribosomal protein L35 Thit_1521 PF00707 Translation initiation factor IF-3, C-terminal domain Thit_1521 PF05198 Translation initiation factor IF-3, N-terminal domain Thit_1522 PF01264 Chorismate synthase Thit_1524 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Thit_1524 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thit_1524 PF02824 TGS domain Thit_1524 PF03129 Anticodon binding domain Thit_1525 PF04286 Protein of unknown function (DUF445) Thit_1528 PF00085 Thioredoxin Thit_1529 PF01430 Hsp33 protein Thit_1530 PF00313 'Cold-shock' DNA-binding domain Thit_1531 PF02146 Sir2 family Thit_1534 PF01106 NifU-like domain Thit_1535 PF13185 GAF domain Thit_1537 PF01790 Prolipoprotein diacylglyceryl transferase Thit_1540 PF01546 Peptidase family M20/M25/M40 Thit_1541 PF01238 Phosphomannose isomerase type I Thit_1542 PF01048 Phosphorylase superfamily Thit_1543 PF01784 NIF3 (NGG1p interacting factor 3) Thit_1546 PF04545 Sigma-70, region 4 Thit_1546 PF04542 Sigma-70 region 2 Thit_1546 PF04539 Sigma-70 region 3 Thit_1546 PF00140 Sigma-70 factor, region 1.2 Thit_1546 PF03979 Sigma-70 factor, region 1.1 Thit_1547 PF01807 CHC2 zinc finger Thit_1547 PF08275 DNA primase catalytic core, N-terminal domain Thit_1547 PF10410 DnaB-helicase binding domain of primase Thit_1548 PF13286 Phosphohydrolase-associated domain Thit_1548 PF01966 HD domain Thit_1549 PF03840 Preprotein translocase SecG subunit Thit_1550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_1551 PF00113 Enolase, C-terminal TIM barrel domain Thit_1551 PF03952 Enolase, N-terminal domain Thit_1553 PF00121 Triosephosphate isomerase Thit_1554 PF00162 Phosphoglycerate kinase Thit_1555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Thit_1555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Thit_1556 PF04198 Putative sugar-binding domain Thit_1557 PF00309 Sigma-54 factor, Activator interacting domain (AID) Thit_1557 PF04552 Sigma-54, DNA binding domain Thit_1557 PF04963 Sigma-54 factor, core binding domain Thit_1558 PF00708 Acylphosphatase Thit_1560 PF01475 Ferric uptake regulator family Thit_1561 PF04294 VanW like protein Thit_1562 PF00730 HhH-GPD superfamily base excision DNA repair protein Thit_1562 PF00633 Helix-hairpin-helix motif Thit_1562 PF10576 Iron-sulfur binding domain of endonuclease III Thit_1563 PF08331 Domain of unknown function (DUF1730) Thit_1568 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thit_1568 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Thit_1568 PF03129 Anticodon binding domain Thit_1568 PF02824 TGS domain Thit_1569 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Thit_1569 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Thit_1572 PF00171 Aldehyde dehydrogenase family Thit_1574 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_1574 PF01842 ACT domain Thit_1574 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_1575 PF00701 Dihydrodipicolinate synthetase family Thit_1576 PF01116 Fructose-bisphosphate aldolase class-II Thit_1577 PF02811 PHP domain Thit_1578 PF13419 Haloacid dehalogenase-like hydrolase Thit_1579 PF02502 Ribose/Galactose Isomerase Thit_1580 PF02779 Transketolase, pyrimidine binding domain Thit_1580 PF02780 Transketolase, C-terminal domain Thit_1581 PF00456 Transketolase, thiamine diphosphate binding domain Thit_1582 PF00923 Transaldolase/Fructose-6-phosphate aldolase Thit_1583 PF00158 Sigma-54 interaction domain Thit_1585 PF00849 RNA pseudouridylate synthase Thit_1586 PF00293 NUDIX domain Thit_1586 PF13344 Haloacid dehalogenase-like hydrolase Thit_1589 PF00004 ATPase family associated with various cellular activities (AAA) Thit_1589 PF16193 AAA C-terminal domain Thit_1589 PF12002 MgsA AAA+ ATPase C terminal Thit_1590 PF02660 Glycerol-3-phosphate acyltransferase Thit_1595 PF05958 tRNA (Uracil-5-)-methyltransferase Thit_1595 PF01938 TRAM domain Thit_1598 PF05067 Manganese containing catalase Thit_1599 PF04073 Aminoacyl-tRNA editing domain Thit_1600 PF00809 Pterin binding enzyme Thit_1600 PF02965 Vitamin B12 dependent methionine synthase, activation domain Thit_1600 PF02310 B12 binding domain Thit_1600 PF02607 B12 binding domain Thit_1600 PF02574 Homocysteine S-methyltransferase Thit_1601 PF02219 Methylenetetrahydrofolate reductase Thit_1601 PF02574 Homocysteine S-methyltransferase Thit_1602 PF11897 Protein of unknown function (DUF3417) Thit_1602 PF00343 Carbohydrate phosphorylase Thit_1603 PF00342 Phosphoglucose isomerase Thit_1604 PF00881 Nitroreductase family Thit_1606 PF02769 AIR synthase related protein, C-terminal domain Thit_1606 PF00586 AIR synthase related protein, N-terminal domain Thit_1607 PF01924 Hydrogenase formation hypA family Thit_1608 PF01455 HupF/HypC family Thit_1609 PF07503 HypF finger Thit_1609 PF00708 Acylphosphatase Thit_1609 PF17788 HypF Kae1-like domain Thit_1609 PF01300 Telomere recombination Thit_1610 PF02492 CobW/HypB/UreG, nucleotide-binding domain Thit_1611 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Thit_1612 PF12838 4Fe-4S dicluster domain Thit_1613 PF00374 Nickel-dependent hydrogenase Thit_1613 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Thit_1615 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Thit_1616 PF00146 NADH dehydrogenase Thit_1617 PF00361 Proton-conducting membrane transporter Thit_1617 PF13244 Domain of unknown function (DUF4040) Thit_1617 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Thit_1618 PF13936 Helix-turn-helix domain Thit_1620 PF08502 LeuA allosteric (dimerisation) domain Thit_1620 PF00682 HMGL-like Thit_1621 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Thit_1622 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1623 PF00571 CBS domain Thit_1623 PF00005 ABC transporter Thit_1624 PF03600 Citrate transporter Thit_1624 PF02080 TrkA-C domain Thit_1625 PF01554 MatE Thit_1627 PF01938 TRAM domain Thit_1627 PF05958 tRNA (Uracil-5-)-methyltransferase Thit_1629 PF02887 Pyruvate kinase, alpha/beta domain Thit_1629 PF00224 Pyruvate kinase, barrel domain Thit_1629 PF00391 PEP-utilising enzyme, mobile domain Thit_1630 PF00365 Phosphofructokinase Thit_1632 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Thit_1632 PF07733 Bacterial DNA polymerase III alpha NTPase domain Thit_1632 PF14579 Helix-hairpin-helix motif Thit_1632 PF02811 PHP domain Thit_1633 PF03061 Thioesterase superfamily Thit_1633 PF07085 DRTGG domain Thit_1633 PF00392 Bacterial regulatory proteins, gntR family Thit_1633 PF00571 CBS domain Thit_1634 PF00381 PTS HPr component phosphorylation site Thit_1635 PF02650 WhiA C-terminal HTH domain Thit_1635 PF14527 WhiA LAGLIDADG-like domain Thit_1635 PF10298 WhiA N-terminal LAGLIDADG-like domain Thit_1637 PF00128 Alpha amylase, catalytic domain Thit_1637 PF02903 Alpha amylase, N-terminal ig-like domain Thit_1638 PF13464 Domain of unknown function (DUF4115) Thit_1641 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1642 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1643 PF13416 Bacterial extracellular solute-binding protein Thit_1644 PF00686 Starch binding domain Thit_1644 PF01833 IPT/TIG domain Thit_1644 PF00128 Alpha amylase, catalytic domain Thit_1644 PF02806 Alpha amylase, C-terminal all-beta domain Thit_1645 PF01933 Uncharacterised protein family UPF0052 Thit_1646 PF03668 P-loop ATPase protein family Thit_1647 PF02811 PHP domain Thit_1648 PF01565 FAD binding domain Thit_1648 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Thit_1653 PF00403 Heavy-metal-associated domain Thit_1657 PF00403 Heavy-metal-associated domain Thit_1658 PF09335 SNARE associated Golgi protein Thit_1659 PF02001 Protein of unknown function DUF134 Thit_1662 PF01475 Ferric uptake regulator family Thit_1663 PF01966 HD domain Thit_1665 PF04023 FeoA domain Thit_1665 PF07670 Nucleoside recognition Thit_1665 PF17910 FeoB cytosolic helical domain Thit_1665 PF07664 Ferrous iron transport protein B C terminus Thit_1665 PF02421 Ferrous iron transport protein B Thit_1667 PF02421 Ferrous iron transport protein B Thit_1667 PF04023 FeoA domain Thit_1667 PF07664 Ferrous iron transport protein B C terminus Thit_1667 PF17910 FeoB cytosolic helical domain Thit_1667 PF07670 Nucleoside recognition Thit_1670 PF01980 tRNA-methyltransferase O Thit_1671 PF00005 ABC transporter Thit_1672 PF01032 FecCD transport family Thit_1673 PF01497 Periplasmic binding protein Thit_1674 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_1674 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Thit_1675 PF04055 Radical SAM superfamily Thit_1675 PF06968 Biotin and Thiamin Synthesis associated domain Thit_1676 PF00753 Metallo-beta-lactamase superfamily Thit_1676 PF16123 Hydroxyacylglutathione hydrolase C-terminus Thit_1679 PF10609 NUBPL iron-transfer P-loop NTPase Thit_1680 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Thit_1686 PF01861 Branched-chain polyamine synthase A C-terminal domain Thit_1687 PF00356 Bacterial regulatory proteins, lacI family Thit_1688 PF00294 pfkB family carbohydrate kinase Thit_1689 PF00251 Glycosyl hydrolases family 32 N-terminal domain Thit_1689 PF08244 Glycosyl hydrolases family 32 C terminal Thit_1690 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1692 PF01547 Bacterial extracellular solute-binding protein Thit_1697 PF00905 Penicillin binding protein transpeptidase domain Thit_1697 PF03717 Penicillin-binding Protein dimerisation domain Thit_1697 PF03793 PASTA domain Thit_1699 PF00923 Transaldolase/Fructose-6-phosphate aldolase Thit_1700 PF13685 Iron-containing alcohol dehydrogenase Thit_1701 PF00392 Bacterial regulatory proteins, gntR family Thit_1702 PF00596 Class II Aldolase and Adducin N-terminal domain Thit_1703 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Thit_1703 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Thit_1704 PF11762 L-arabinose isomerase C-terminal domain Thit_1704 PF02610 L-arabinose isomerase Thit_1706 PF02653 Branched-chain amino acid transport system / permease component Thit_1707 PF00005 ABC transporter Thit_1710 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1711 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1712 PF01547 Bacterial extracellular solute-binding protein Thit_1713 PF09261 Alpha mannosidase middle domain Thit_1713 PF01074 Glycosyl hydrolases family 38 N-terminal domain Thit_1713 PF07748 Glycosyl hydrolases family 38 C-terminal domain Thit_1714 PF12833 Helix-turn-helix domain Thit_1714 PF02311 AraC-like ligand binding domain Thit_1715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Thit_1715 PF00703 Glycosyl hydrolases family 2 Thit_1715 PF02837 Glycosyl hydrolases family 2, sugar binding domain Thit_1715 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Thit_1715 PF16355 Domain of unknown function (DUF4982) Thit_1716 PF16875 Glycosyl hydrolase family 36 N-terminal domain Thit_1716 PF16874 Glycosyl hydrolase family 36 C-terminal domain Thit_1717 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1718 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1719 PF13416 Bacterial extracellular solute-binding protein Thit_1721 PF00480 ROK family Thit_1721 PF01325 Iron dependent repressor, N-terminal DNA binding domain Thit_1722 PF16363 GDP-mannose 4,6 dehydratase Thit_1723 PF08544 GHMP kinases C terminal Thit_1723 PF00288 GHMP kinases N terminal domain Thit_1723 PF10509 Galactokinase galactose-binding signature Thit_1724 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Thit_1724 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Thit_1727 PF00128 Alpha amylase, catalytic domain Thit_1727 PF02903 Alpha amylase, N-terminal ig-like domain Thit_1727 PF00395 S-layer homology domain Thit_1730 PF01081 KDPG and KHG aldolase Thit_1731 PF01554 MatE Thit_1733 PF11975 Family 4 glycosyl hydrolase C-terminal domain Thit_1733 PF02056 Family 4 glycosyl hydrolase Thit_1734 PF04962 KduI/IolB family Thit_1735 PF00295 Glycosyl hydrolases family 28 Thit_1736 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1737 PF00528 Binding-protein-dependent transport system inner membrane component Thit_1739 PF07470 Glycosyl Hydrolase Family 88 Thit_1740 PF00294 pfkB family carbohydrate kinase Thit_1741 PF02614 Glucuronate isomerase Thit_1742 PF01232 Mannitol dehydrogenase Rossmann domain Thit_1742 PF08125 Mannitol dehydrogenase C-terminal domain Thit_1743 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Thit_1743 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Thit_1744 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Thit_1744 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Thit_1745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_1745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_1747 PF00455 DeoR C terminal sensor domain Thit_1747 PF08220 DeoR-like helix-turn-helix domain Thit_1748 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_1748 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_1751 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Thit_1751 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Thit_1752 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Thit_1752 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Thit_1753 PF00356 Bacterial regulatory proteins, lacI family Thit_1759 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Thit_1759 PF01871 AMMECR1 Thit_1761 PF13193 AMP-binding enzyme C-terminal domain Thit_1761 PF00501 AMP-binding enzyme Thit_1762 PF00480 ROK family Thit_1763 PF02811 PHP domain Thit_1764 PF07475 HPr Serine kinase C-terminal domain Thit_1764 PF02603 HPr Serine kinase N terminus Thit_1765 PF02237 Biotin protein ligase C terminal domain Thit_1765 PF08279 HTH domain Thit_1765 PF03099 Biotin/lipoate A/B protein ligase family Thit_1766 PF02151 UvrB/uvrC motif Thit_1766 PF08459 UvrC Helix-hairpin-helix N-terminal Thit_1766 PF01541 GIY-YIG catalytic domain Thit_1767 PF00905 Penicillin binding protein transpeptidase domain Thit_1768 PF01098 Cell cycle protein Thit_1769 PF16697 Inner membrane component of T3SS, cytoplasmic domain Thit_1770 PF17760 UvrA interaction domain Thit_1770 PF17755 UvrA DNA-binding domain Thit_1771 PF12344 Ultra-violet resistance protein B Thit_1771 PF00271 Helicase conserved C-terminal domain Thit_1771 PF17757 UvrB interaction domain Thit_1771 PF04851 Type III restriction enzyme, res subunit Thit_1771 PF02151 UvrB/uvrC motif Thit_1772 PF04029 2-phosphosulpholactate phosphatase Thit_1773 PF00595 PDZ domain Thit_1774 PF17820 PDZ domain Thit_1774 PF01471 Putative peptidoglycan binding domain Thit_1774 PF03572 Peptidase family S41 Thit_1775 PF04225 Opacity-associated protein A LysM-like domain Thit_1775 PF01551 Peptidase family M23 Thit_1776 PF02687 FtsX-like permease family Thit_1776 PF18075 FtsX extracellular domain Thit_1777 PF00005 ABC transporter Thit_1778 PF17853 GGDEF-like domain Thit_1778 PF13556 PucR C-terminal helix-turn-helix domain Thit_1778 PF05651 Putative sugar diacid recognition Thit_1779 PF03459 TOBE domain Thit_1779 PF00005 ABC transporter Thit_1779 PF17912 MalK OB fold domain Thit_1781 PF13936 Helix-turn-helix domain Thit_1782 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Thit_1782 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Thit_1784 PF01386 Ribosomal L25p family Thit_1784 PF14693 Ribosomal protein TL5, C-terminal domain Thit_1785 PF13419 Haloacid dehalogenase-like hydrolase Thit_1789 PF02491 SHS2 domain inserted in FTSA Thit_1790 PF01869 BadF/BadG/BcrA/BcrD ATPase family Thit_1791 PF00004 ATPase family associated with various cellular activities (AAA) Thit_1791 PF17862 AAA+ lid domain Thit_1791 PF01434 Peptidase family M41 Thit_1794 PF00391 PEP-utilising enzyme, mobile domain Thit_1794 PF03610 PTS system fructose IIA component Thit_1794 PF00381 PTS HPr component phosphorylation site Thit_1794 PF05524 PEP-utilising enzyme, N-terminal Thit_1795 PF02734 DAK2 domain Thit_1796 PF02733 Dak1 domain Thit_1797 PF13426 PAS domain Thit_1797 PF00158 Sigma-54 interaction domain Thit_1797 PF02954 Bacterial regulatory protein, Fis family Thit_1799 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_1799 PF04324 BFD-like [2Fe-2S] binding domain Thit_1800 PF01266 FAD dependent oxidoreductase Thit_1801 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Thit_1801 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Thit_1802 PF00230 Major intrinsic protein Thit_1803 PF04309 Glycerol-3-phosphate responsive antiterminator Thit_1804 PF01522 Polysaccharide deacetylase Thit_1807 PF00483 Nucleotidyl transferase Thit_1809 PF03845 Spore germination protein Thit_1810 PF02585 GlcNAc-PI de-N-acetylase Thit_1811 PF01244 Membrane dipeptidase (Peptidase family M19) Thit_1812 PF00464 Serine hydroxymethyltransferase Thit_1813 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Thit_1813 PF01502 Phosphoribosyl-AMP cyclohydrolase Thit_1814 PF00977 Histidine biosynthesis protein Thit_1815 PF00977 Histidine biosynthesis protein Thit_1816 PF00117 Glutamine amidotransferase class-I Thit_1817 PF00475 Imidazoleglycerol-phosphate dehydratase Thit_1818 PF00155 Aminotransferase class I and II Thit_1819 PF00815 Histidinol dehydrogenase Thit_1820 PF01634 ATP phosphoribosyltransferase Thit_1821 PF13393 Histidyl-tRNA synthetase Thit_1830 PF00005 ABC transporter Thit_1831 PF10091 Putative glucoamylase Thit_1831 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Thit_1831 PF06165 Glycosyltransferase family 36 Thit_1832 PF01189 16S rRNA methyltransferase RsmB/F Thit_1832 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Thit_1832 PF17126 RsmF rRNA methyltransferase first C-terminal domain Thit_1833 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Thit_1833 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Thit_1834 PF00561 alpha/beta hydrolase fold Thit_1835 PF01053 Cys/Met metabolism PLP-dependent enzyme Thit_1836 PF03447 Homoserine dehydrogenase, NAD binding domain Thit_1836 PF00742 Homoserine dehydrogenase Thit_1836 PF01842 ACT domain Thit_1839 PF02954 Bacterial regulatory protein, Fis family Thit_1839 PF00072 Response regulator receiver domain Thit_1839 PF00158 Sigma-54 interaction domain Thit_1840 PF00072 Response regulator receiver domain Thit_1840 PF00196 Bacterial regulatory proteins, luxR family Thit_1841 PF00211 Adenylate and Guanylate cyclase catalytic domain Thit_1841 PF00072 Response regulator receiver domain Thit_1844 PF13426 PAS domain Thit_1844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_1844 PF00072 Response regulator receiver domain Thit_1844 PF00512 His Kinase A (phospho-acceptor) domain Thit_1844 PF08448 PAS fold Thit_1845 PF01964 Radical SAM ThiC family Thit_1847 PF02780 Transketolase, C-terminal domain Thit_1847 PF02779 Transketolase, pyrimidine binding domain Thit_1848 PF00456 Transketolase, thiamine diphosphate binding domain Thit_1849 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Thit_1849 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Thit_1850 PF03808 Glycosyl transferase WecB/TagA/CpsF family Thit_1854 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Thit_1856 PF00842 Alanine racemase, C-terminal domain Thit_1856 PF01168 Alanine racemase, N-terminal domain Thit_1858 PF01256 Carbohydrate kinase Thit_1858 PF03853 YjeF-related protein N-terminus Thit_1859 PF01648 4'-phosphopantetheinyl transferase superfamily Thit_1863 PF03063 Prismane/CO dehydrogenase family Thit_1867 PF02735 Ku70/Ku80 beta-barrel domain Thit_1868 PF01068 ATP dependent DNA ligase domain Thit_1869 PF01894 Uncharacterised protein family UPF0047 Thit_1872 PF14461 Prokaryotic E2 family B Thit_1872 PF00899 ThiF family Thit_1875 PF13401 AAA domain Thit_1875 PF11426 Tn7 transposition regulator TnsC Thit_1876 PF00665 Integrase core domain Thit_1877 PF08722 TnsA endonuclease N terminal Thit_1877 PF08721 TnsA endonuclease C terminal Thit_1880 PF01381 Helix-turn-helix Thit_1881 PF02899 Phage integrase, N-terminal SAM-like domain Thit_1881 PF00589 Phage integrase family Thit_1882 PF01548 Transposase Thit_1882 PF02371 Transposase IS116/IS110/IS902 family Thit_1888 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_1899 PF01555 DNA methylase Thit_1906 PF01380 SIS domain Thit_1907 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Thit_1907 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Thit_1907 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Thit_1907 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Thit_1908 PF01553 Acyltransferase Thit_1910 PF01515 Phosphate acetyl/butaryl transferase Thit_1916 PF00871 Acetokinase family Thit_1917 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thit_1917 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Thit_1918 PF01515 Phosphate acetyl/butaryl transferase Thit_1919 PF00871 Acetokinase family Thit_1921 PF02457 DisA bacterial checkpoint controller nucleotide-binding Thit_1926 PF08239 Bacterial SH3 domain Thit_1926 PF01520 N-acetylmuramoyl-L-alanine amidase Thit_1927 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Thit_1927 PF01476 LysM domain Thit_1928 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_1929 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_1933 PF02511 Thymidylate synthase complementing protein Thit_1935 PF02554 Carbon starvation protein CstA Thit_1935 PF13722 5TM C-terminal transporter carbon starvation CstA Thit_1937 PF00380 Ribosomal protein S9/S16 Thit_1938 PF00572 Ribosomal protein L13 Thit_1939 PF01416 tRNA pseudouridine synthase Thit_1940 PF02361 Cobalt transport protein Thit_1941 PF00005 ABC transporter Thit_1942 PF00005 ABC transporter Thit_1943 PF01196 Ribosomal protein L17 Thit_1944 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Thit_1944 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Thit_1944 PF01000 RNA polymerase Rpb3/RpoA insert domain Thit_1945 PF00163 Ribosomal protein S4/S9 N-terminal domain Thit_1945 PF01479 S4 domain Thit_1946 PF00411 Ribosomal protein S11 Thit_1947 PF00416 Ribosomal protein S13/S18 Thit_1948 PF00444 Ribosomal protein L36 Thit_1949 PF01176 Translation initiation factor 1A / IF-1 Thit_1951 PF00557 Metallopeptidase family M24 Thit_1952 PF05191 Adenylate kinase, active site lid Thit_1953 PF00344 SecY translocase Thit_1954 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Thit_1955 PF03719 Ribosomal protein S5, C-terminal domain Thit_1955 PF00333 Ribosomal protein S5, N-terminal domain Thit_1956 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Thit_1957 PF00347 Ribosomal protein L6 Thit_1958 PF00410 Ribosomal protein S8 Thit_1959 PF00253 Ribosomal protein S14p/S29e Thit_1960 PF00673 ribosomal L5P family C-terminus Thit_1960 PF00281 Ribosomal protein L5 Thit_1961 PF00467 KOW motif Thit_1961 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Thit_1962 PF00238 Ribosomal protein L14p/L23e Thit_1963 PF00366 Ribosomal protein S17 Thit_1964 PF00831 Ribosomal L29 protein Thit_1965 PF00252 Ribosomal protein L16p/L10e Thit_1966 PF07650 KH domain Thit_1966 PF00189 Ribosomal protein S3, C-terminal domain Thit_1967 PF00237 Ribosomal protein L22p/L17e Thit_1969 PF00203 Ribosomal protein S19 Thit_1970 PF00181 Ribosomal Proteins L2, RNA binding domain Thit_1970 PF03947 Ribosomal Proteins L2, C-terminal domain Thit_1973 PF00276 Ribosomal protein L23 Thit_1974 PF00573 Ribosomal protein L4/L1 family Thit_1975 PF00297 Ribosomal protein L3 Thit_1976 PF00338 Ribosomal protein S10p/S20e Thit_1977 PF03144 Elongation factor Tu domain 2 Thit_1977 PF03143 Elongation factor Tu C-terminal domain Thit_1977 PF00009 Elongation factor Tu GTP binding domain Thit_1978 PF03764 Elongation factor G, domain IV Thit_1978 PF03144 Elongation factor Tu domain 2 Thit_1978 PF00679 Elongation factor G C-terminus Thit_1978 PF14492 Elongation Factor G, domain II Thit_1978 PF00009 Elongation factor Tu GTP binding domain Thit_1979 PF00177 Ribosomal protein S7p/S5e Thit_1980 PF00164 Ribosomal protein S12/S23 Thit_1981 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Thit_1982 PF04998 RNA polymerase Rpb1, domain 5 Thit_1982 PF05000 RNA polymerase Rpb1, domain 4 Thit_1982 PF04997 RNA polymerase Rpb1, domain 1 Thit_1982 PF00623 RNA polymerase Rpb1, domain 2 Thit_1982 PF04983 RNA polymerase Rpb1, domain 3 Thit_1983 PF04560 RNA polymerase Rpb2, domain 7 Thit_1983 PF00562 RNA polymerase Rpb2, domain 6 Thit_1983 PF04563 RNA polymerase beta subunit Thit_1983 PF04561 RNA polymerase Rpb2, domain 2 Thit_1983 PF04565 RNA polymerase Rpb2, domain 3 Thit_1983 PF10385 RNA polymerase beta subunit external 1 domain Thit_1984 PF16320 Ribosomal protein L7/L12 dimerisation domain Thit_1984 PF00542 Ribosomal protein L7/L12 C-terminal domain Thit_1985 PF00466 Ribosomal protein L10 Thit_1986 PF00687 Ribosomal protein L1p/L10e family Thit_1987 PF03946 Ribosomal protein L11, N-terminal domain Thit_1987 PF00298 Ribosomal protein L11, RNA binding domain Thit_1988 PF00467 KOW motif Thit_1988 PF02357 Transcription termination factor nusG Thit_1989 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Thit_1990 PF00471 Ribosomal protein L33 Thit_1991 PF03144 Elongation factor Tu domain 2 Thit_1991 PF03143 Elongation factor Tu C-terminal domain Thit_1991 PF00009 Elongation factor Tu GTP binding domain Thit_1992 PF08281 Sigma-70, region 4 Thit_1992 PF04542 Sigma-70 region 2 Thit_1993 PF05991 YacP-like NYN domain Thit_1994 PF08032 RNA 2'-O ribose methyltransferase substrate binding Thit_1994 PF00588 SpoU rRNA Methylase family Thit_1995 PF00636 Ribonuclease III domain Thit_1996 PF01406 tRNA synthetases class I (C) catalytic domain Thit_1996 PF09190 DALR domain Thit_1997 PF00132 Bacterial transferase hexapeptide (six repeats) Thit_1997 PF06426 Serine acetyltransferase, N-terminal Thit_1998 PF00749 tRNA synthetases class I (E and Q), catalytic domain Thit_2000 PF03129 Anticodon binding domain Thit_2000 PF04073 Aminoacyl-tRNA editing domain Thit_2000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Thit_2001 PF02542 YgbB family Thit_2003 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Thit_2006 PF18073 Rubredoxin metal binding domain Thit_2007 PF01566 Natural resistance-associated macrophage protein Thit_2009 PF00528 Binding-protein-dependent transport system inner membrane component Thit_2010 PF00528 Binding-protein-dependent transport system inner membrane component Thit_2011 PF13416 Bacterial extracellular solute-binding protein Thit_2012 PF13936 Helix-turn-helix domain Thit_2014 PF00004 ATPase family associated with various cellular activities (AAA) Thit_2014 PF07724 AAA domain (Cdc48 subfamily) Thit_2014 PF17871 AAA lid domain Thit_2014 PF02861 Clp amino terminal domain, pathogenicity island component Thit_2014 PF10431 C-terminal, D2-small domain, of ClpB protein Thit_2015 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Thit_2016 PF02151 UvrB/uvrC motif Thit_2017 PF05848 CtsR N-terminal HTH domain Thit_2017 PF17727 CtsR C-terminal dimerization domain Thit_2019 PF00390 Malic enzyme, N-terminal domain Thit_2019 PF03949 Malic enzyme, NAD binding domain Thit_2021 PF03144 Elongation factor Tu domain 2 Thit_2021 PF00679 Elongation factor G C-terminus Thit_2021 PF14492 Elongation Factor G, domain II Thit_2021 PF03764 Elongation factor G, domain IV Thit_2021 PF00009 Elongation factor Tu GTP binding domain Thit_2022 PF05524 PEP-utilising enzyme, N-terminal Thit_2022 PF02896 PEP-utilising enzyme, TIM barrel domain Thit_2022 PF00391 PEP-utilising enzyme, mobile domain Thit_2024 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_2025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_2025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_2025 PF02378 Phosphotransferase system, EIIC Thit_2026 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_2026 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_2027 PF05043 Mga helix-turn-helix domain Thit_2027 PF08279 HTH domain Thit_2027 PF00874 PRD domain Thit_2027 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_2028 PF00072 Response regulator receiver domain Thit_2028 PF00990 Diguanylate cyclase, GGDEF domain Thit_2029 PF03477 ATP cone domain Thit_2029 PF00317 Ribonucleotide reductase, all-alpha domain Thit_2029 PF02867 Ribonucleotide reductase, barrel domain Thit_2031 PF00202 Aminotransferase class-III Thit_2032 PF05979 Bacterial protein of unknown function (DUF896) Thit_2034 PF00326 Prolyl oligopeptidase family Thit_2034 PF07676 WD40-like Beta Propeller Repeat Thit_2035 PF17746 SfsA N-terminal OB domain Thit_2035 PF03749 Sugar fermentation stimulation protein RE domain Thit_2036 PF01242 6-pyruvoyl tetrahydropterin synthase Thit_2037 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Thit_2038 PF00809 Pterin binding enzyme Thit_2039 PF01227 GTP cyclohydrolase I Thit_2040 PF00152 tRNA synthetases class II (D, K and N) Thit_2040 PF01336 OB-fold nucleic acid binding domain Thit_2041 PF03449 Transcription elongation factor, N-terminal Thit_2041 PF01272 Transcription elongation factor, GreA/GreB, C-term Thit_2042 PF00202 Aminotransferase class-III Thit_2046 PF05504 Spore germination B3/ GerAC like, C-terminal Thit_2047 PF03323 Bacillus/Clostridium GerA spore germination protein Thit_2048 PF03845 Spore germination protein Thit_2049 PF03309 Type III pantothenate kinase Thit_2050 PF12822 ECF transporter, substrate-specific component Thit_2051 PF00364 Biotin-requiring enzyme Thit_2053 PF01039 Carboxyl transferase domain Thit_2055 PF01268 Formate--tetrahydrofolate ligase Thit_2056 PF00989 PAS fold Thit_2056 PF00512 His Kinase A (phospho-acceptor) domain Thit_2056 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_2057 PF00004 ATPase family associated with various cellular activities (AAA) Thit_2057 PF17862 AAA+ lid domain Thit_2057 PF06480 FtsH Extracellular Thit_2057 PF01434 Peptidase family M41 Thit_2059 PF11734 TilS substrate C-terminal domain Thit_2059 PF01171 PP-loop family Thit_2060 PF07228 Stage II sporulation protein E (SpoIIE) Thit_2061 PF01209 ubiE/COQ5 methyltransferase family Thit_2062 PF00892 EamA-like transporter family Thit_2065 PF00005 ABC transporter Thit_2066 PF12679 ABC-2 family transporter protein Thit_2072 PF01520 N-acetylmuramoyl-L-alanine amidase Thit_2074 PF03707 Bacterial signalling protein N terminal repeat Thit_2074 PF00990 Diguanylate cyclase, GGDEF domain Thit_2074 PF00563 EAL domain Thit_2075 PF00266 Aminotransferase class-V Thit_2077 PF00403 Heavy-metal-associated domain Thit_2078 PF00403 Heavy-metal-associated domain Thit_2079 PF01022 Bacterial regulatory protein, arsR family Thit_2082 PF00486 Transcriptional regulatory protein, C terminal Thit_2082 PF00072 Response regulator receiver domain Thit_2087 PF00291 Pyridoxal-phosphate dependent enzyme Thit_2089 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Thit_2096 PF01381 Helix-turn-helix Thit_2100 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thit_2100 PF00306 ATP synthase alpha/beta chain, C terminal domain Thit_2100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_2103 PF00294 pfkB family carbohydrate kinase Thit_2104 PF08244 Glycosyl hydrolases family 32 C terminal Thit_2104 PF00251 Glycosyl hydrolases family 32 N-terminal domain Thit_2107 PF00251 Glycosyl hydrolases family 32 N-terminal domain Thit_2107 PF08244 Glycosyl hydrolases family 32 C terminal Thit_2108 PF08244 Glycosyl hydrolases family 32 C terminal Thit_2108 PF00251 Glycosyl hydrolases family 32 N-terminal domain Thit_2109 PF00528 Binding-protein-dependent transport system inner membrane component Thit_2110 PF00528 Binding-protein-dependent transport system inner membrane component Thit_2113 PF00356 Bacterial regulatory proteins, lacI family Thit_2114 PF13936 Helix-turn-helix domain Thit_2128 PF01761 3-dehydroquinate synthase Thit_2128 PF02541 Ppx/GppA phosphatase family Thit_2129 PF00575 S1 RNA binding domain Thit_2132 PF02833 DHHA2 domain Thit_2132 PF07085 DRTGG domain Thit_2132 PF01368 DHH family Thit_2132 PF00571 CBS domain Thit_2135 PF07873 YabP family Thit_2136 PF08486 Stage II sporulation protein Thit_2137 PF01479 S4 domain Thit_2138 PF00216 Bacterial DNA-binding protein Thit_2139 PF03819 MazG nucleotide pyrophosphohydrolase domain Thit_2139 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Thit_2141 PF05977 Transmembrane secretion effector Thit_2142 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Thit_2142 PF01926 50S ribosome-binding GTPase Thit_2143 PF00206 Lyase Thit_2143 PF10415 Fumarase C C-terminus Thit_2144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_2144 PF00672 HAMP domain Thit_2144 PF00512 His Kinase A (phospho-acceptor) domain Thit_2144 PF18698 Histidine kinase sensor domain Thit_2145 PF01880 Desulfoferrodoxin Thit_2145 PF06397 Desulfoferrodoxin, N-terminal domain Thit_2148 PF02424 ApbE family Thit_2149 PF00348 Polyprenyl synthetase Thit_2152 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_2153 PF00300 Histidine phosphatase superfamily (branch 1) Thit_2154 PF00654 Voltage gated chloride channel Thit_2156 PF00690 Cation transporter/ATPase, N-terminus Thit_2156 PF00689 Cation transporting ATPase, C-terminus Thit_2159 PF00005 ABC transporter Thit_2160 PF00392 Bacterial regulatory proteins, gntR family Thit_2165 PF00206 Lyase Thit_2165 PF14698 Argininosuccinate lyase C-terminal Thit_2166 PF00764 Arginosuccinate synthase Thit_2167 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Thit_2167 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Thit_2167 PF02142 MGS-like domain Thit_2168 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Thit_2168 PF00117 Glutamine amidotransferase class-I Thit_2169 PF00202 Aminotransferase class-III Thit_2170 PF00696 Amino acid kinase family Thit_2171 PF01960 ArgJ family Thit_2172 PF01118 Semialdehyde dehydrogenase, NAD binding domain Thit_2172 PF02774 Semialdehyde dehydrogenase, dimerisation domain Thit_2176 PF00465 Iron-containing alcohol dehydrogenase Thit_2177 PF00107 Zinc-binding dehydrogenase Thit_2177 PF08240 Alcohol dehydrogenase GroES-like domain Thit_2178 PF00175 Oxidoreductase NAD-binding domain Thit_2178 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Thit_2179 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Thit_2179 PF13247 4Fe-4S dicluster domain Thit_2179 PF07992 Pyridine nucleotide-disulphide oxidoreductase Thit_2180 PF14791 DNA polymerase beta thumb Thit_2180 PF02811 PHP domain Thit_2180 PF14716 Helix-hairpin-helix domain Thit_2181 PF00689 Cation transporting ATPase, C-terminus Thit_2181 PF00690 Cation transporter/ATPase, N-terminus Thit_2182 PF13936 Helix-turn-helix domain Thit_2198 PF01569 PAP2 superfamily Thit_2199 PF09515 Thiamine transporter protein (Thia_YuaJ) Thit_2200 PF00664 ABC transporter transmembrane region Thit_2200 PF00005 ABC transporter Thit_2201 PF00664 ABC transporter transmembrane region Thit_2201 PF00005 ABC transporter Thit_2202 PF01047 MarR family Thit_2203 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Thit_2203 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Thit_2204 PF00171 Aldehyde dehydrogenase family Thit_2204 PF00465 Iron-containing alcohol dehydrogenase Thit_2206 PF00248 Aldo/keto reductase family Thit_2207 PF01180 Dihydroorotate dehydrogenase Thit_2208 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Thit_2209 PF00528 Binding-protein-dependent transport system inner membrane component Thit_2210 PF00528 Binding-protein-dependent transport system inner membrane component Thit_2211 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thit_2211 PF00005 ABC transporter Thit_2212 PF00005 ABC transporter Thit_2212 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Thit_2214 PF05746 DALR anticodon binding domain Thit_2214 PF03485 Arginyl tRNA synthetase N terminal domain Thit_2214 PF00750 tRNA synthetases class I (R) Thit_2216 PF07478 D-ala D-ala ligase C-terminus Thit_2216 PF01820 D-ala D-ala ligase N-terminus Thit_2217 PF00269 Small, acid-soluble spore proteins, alpha/beta type Thit_2218 PF03413 Peptidase propeptide and YPEB domain Thit_2218 PF14620 YpeB sporulation Thit_2219 PF07486 Cell Wall Hydrolase Thit_2219 PF01471 Putative peptidoglycan binding domain Thit_2220 PF09551 Stage II sporulation protein R (spore_II_R) Thit_2222 PF03845 Spore germination protein Thit_2223 PF03323 Bacillus/Clostridium GerA spore germination protein Thit_2226 PF00392 Bacterial regulatory proteins, gntR family Thit_2226 PF07729 FCD domain Thit_2227 PF00288 GHMP kinases N terminal domain Thit_2227 PF08544 GHMP kinases C terminal Thit_2228 PF01476 LysM domain Thit_2229 PF06257 Biofilm formation stimulator VEG Thit_2230 PF05582 YabG peptidase U57 Thit_2231 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Thit_2231 PF15714 Stage V sporulation protein T C-terminal, transcription factor Thit_2233 PF17757 UvrB interaction domain Thit_2233 PF02559 CarD-like/TRCF domain Thit_2233 PF00270 DEAD/DEAH box helicase Thit_2233 PF00271 Helicase conserved C-terminal domain Thit_2233 PF03461 TRCF domain Thit_2235 PF01195 Peptidyl-tRNA hydrolase Thit_2236 PF13180 PDZ domain Thit_2237 PF00989 PAS fold Thit_2237 PF00512 His Kinase A (phospho-acceptor) domain Thit_2237 PF18698 Histidine kinase sensor domain Thit_2237 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Thit_2237 PF00672 HAMP domain Thit_2238 PF00486 Transcriptional regulatory protein, C terminal Thit_2238 PF00072 Response regulator receiver domain Thit_2239 PF14572 Phosphoribosyl synthetase-associated domain Thit_2239 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Thit_2240 PF12804 MobA-like NTP transferase domain Thit_2240 PF00132 Bacterial transferase hexapeptide (six repeats) Thit_2241 PF04026 SpoVG Thit_2242 PF00156 Phosphoribosyl transferase domain Thit_2242 PF09182 Bacterial purine repressor, N-terminal Thit_2243 PF08245 Mur ligase middle domain Thit_2243 PF02875 Mur ligase family, glutamate ligase domain Thit_2243 PF01225 Mur ligase family, catalytic domain Thit_2248 PF00011 Hsp20/alpha crystallin family Thit_2251 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_2252 PF02378 Phosphotransferase system, EIIC Thit_2252 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_2253 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Thit_2253 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Thit_2254 PF00294 pfkB family carbohydrate kinase Thit_2255 PF08220 DeoR-like helix-turn-helix domain Thit_2255 PF00455 DeoR C terminal sensor domain Thit_2256 PF00395 S-layer homology domain Thit_2257 PF11606 Family 31 carbohydrate binding protein Thit_2262 PF06418 CTP synthase N-terminus Thit_2262 PF00117 Glutamine amidotransferase class-I Thit_2264 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Thit_2264 PF00753 Metallo-beta-lactamase superfamily Thit_2264 PF10996 Beta-Casp domain Thit_2266 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Thit_2266 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Thit_2266 PF01842 ACT domain Thit_2267 PF00266 Aminotransferase class-V Thit_2269 PF01471 Putative peptidoglycan binding domain Thit_2269 PF17820 PDZ domain Thit_2269 PF03572 Peptidase family S41 Thit_2270 PF00288 GHMP kinases N terminal domain Thit_2270 PF08544 GHMP kinases C terminal Thit_2271 PF00291 Pyridoxal-phosphate dependent enzyme Thit_2272 PF03447 Homoserine dehydrogenase, NAD binding domain Thit_2272 PF00742 Homoserine dehydrogenase Thit_2272 PF01842 ACT domain Thit_2275 PF13520 Amino acid permease Thit_2276 PF00753 Metallo-beta-lactamase superfamily Thit_2277 PF09827 CRISPR associated protein Cas2 Thit_2278 PF01867 CRISPR associated protein Cas1 Thit_2281 PF13936 Helix-turn-helix domain Thit_2284 PF00270 DEAD/DEAH box helicase Thit_2284 PF18019 HD domain Thit_2284 PF18395 Cas3 C-terminal domain Thit_2292 PF01592 NifU-like N terminal domain Thit_2293 PF00266 Aminotransferase class-V Thit_2295 PF01458 Uncharacterized protein family (UPF0051) Thit_2296 PF00005 ABC transporter Thit_2297 PF00166 Chaperonin 10 Kd subunit Thit_2298 PF00462 Glutaredoxin Thit_2302 PF00579 tRNA synthetases class I (W and Y) Thit_2302 PF01479 S4 domain Thit_2303 PF02590 Predicted SPOUT methyltransferase Thit_2304 PF02590 Predicted SPOUT methyltransferase Thit_2306 PF13180 PDZ domain Thit_2307 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Thit_2312 PF00486 Transcriptional regulatory protein, C terminal Thit_2312 PF00072 Response regulator receiver domain Thit_2314 PF01476 LysM domain Thit_2314 PF01551 Peptidase family M23 Thit_2314 PF08525 Opacity-associated protein A N-terminal motif Thit_2316 PF00308 Bacterial dnaA protein Thit_2316 PF08299 Bacterial dnaA protein helix-turn-helix Thit_2317 PF11940 Domain of unknown function (DUF3458) Ig-like fold Thit_2317 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Thit_2317 PF01433 Peptidase family M1 domain Thit_2319 PF00753 Metallo-beta-lactamase superfamily Thit_2319 PF13567 Domain of unknown function (DUF4131) Thit_2319 PF03772 Competence protein Thit_2321 PF00709 Adenylosuccinate synthetase Thit_2323 PF00672 HAMP domain Thit_2323 PF02743 Cache domain Thit_2323 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Thit_2325 PF08439 Oligopeptidase F Thit_2325 PF01432 Peptidase family M3 Thit_2327 PF00209 Sodium:neurotransmitter symporter family Thit_2330 PF02417 Chromate transporter Thit_2331 PF01813 ATP synthase subunit D Thit_2332 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_2332 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thit_2333 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Thit_2333 PF16886 ATPsynthase alpha/beta subunit N-term extension Thit_2333 PF02874 ATP synthase alpha/beta family, beta-barrel domain Thit_2334 PF01990 ATP synthase (F/14-kDa) subunit Thit_2335 PF01992 ATP synthase (C/AC39) subunit Thit_2336 PF01991 ATP synthase (E/31 kDa) subunit Thit_2337 PF00137 ATP synthase subunit C Thit_2338 PF01496 V-type ATPase 116kDa subunit family Thit_2340 PF00860 Permease family Thit_2342 PF00872 Transposase, Mutator family Thit_2345 PF01022 Bacterial regulatory protein, arsR family Thit_2346 PF00005 ABC transporter Thit_2350 PF00005 ABC transporter Thit_2364 PF00664 ABC transporter transmembrane region Thit_2364 PF00005 ABC transporter Thit_2378 PF13545 Crp-like helix-turn-helix domain Thit_2378 PF00027 Cyclic nucleotide-binding domain Thit_2379 PF03796 DnaB-like helicase C terminal domain Thit_2379 PF00772 DnaB-like helicase N terminal domain Thit_2380 PF03948 Ribosomal protein L9, C-terminal domain Thit_2380 PF01281 Ribosomal protein L9, N-terminal domain Thit_2381 PF02272 DHHA1 domain Thit_2381 PF01368 DHH family Thit_2384 PF01084 Ribosomal protein S18 Thit_2385 PF00436 Single-strand binding protein family Thit_2386 PF01250 Ribosomal protein S6 Thit_2387 PF06107 Bacterial protein of unknown function (DUF951) Thit_2388 PF00924 Mechanosensitive ion channel Thit_2389 PF06866 Protein of unknown function (DUF1256) Thit_2390 PF02875 Mur ligase family, glutamate ligase domain Thit_2390 PF08443 RimK-like ATP-grasp domain Thit_2390 PF08245 Mur ligase middle domain Thit_2394 PF00266 Aminotransferase class-V Thit_2395 PF02195 ParB-like nuclease domain Thit_2395 PF17762 HTH domain found in ParB protein Thit_2396 PF13614 AAA domain Thit_2399 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Thit_2400 PF02527 rRNA small subunit methyltransferase G Thit_2401 PF13932 GidA associated domain Thit_2401 PF01134 Glucose inhibited division protein A Thit_2402 PF01926 50S ribosome-binding GTPase Thit_2402 PF12631 MnmE helical domain Thit_2402 PF10396 GTP-binding protein TrmE N-terminus Thit_2403 PF14804 Jag N-terminus Thit_2403 PF01424 R3H domain Thit_2404 PF02096 60Kd inner membrane protein Thit_2405 PF01809 Putative membrane protein insertion efficiency factor Thit_2406 PF00825 Ribonuclease P Thit_2407 PF00468 Ribosomal protein L34