Thit_0001 SM00382 ATPases associated with a variety of cellular activities Thit_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Thit_0002 SM00480 DNA polymerase III beta subunit Thit_0003 SM00363 S4 RNA-binding domain Thit_0010 SM00387 Histidine kinase-like ATPases Thit_0010 SM00433 TopoisomeraseII Thit_0011 SM00434 DNA Topoisomerase IV Thit_0014 SM00881 CoA binding domain Thit_0018 SM01329 Thit_0018 Thit_0033 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thit_0033 SM00091 PAS domain Thit_0033 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0033 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0034 SM00382 ATPases associated with a variety of cellular activities Thit_0036 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_0036 SM00493 Thit_0036 Thit_0039 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0044 SM00363 S4 RNA-binding domain Thit_0045 SM00354 helix_turn _helix lactose operon repressor Thit_0049 SM00382 ATPases associated with a variety of cellular activities Thit_0050 SM00382 ATPases associated with a variety of cellular activities Thit_0062 SM00060 Fibronectin type 3 domain Thit_0062 SM00632 Thit_0062 Thit_0062 SM00642 Alpha-amylase domain Thit_0062 SM01065 Starch binding domain Thit_0066 SM00986 Uracil DNA glycosylase superfamily Thit_0066 SM00987 UreE urease accessory protein, C-terminal domain Thit_0069 SM00382 ATPases associated with a variety of cellular activities Thit_0094 SM00966 SpoVT / AbrB like domain Thit_0100 SM01208 Thit_0100 Thit_0101 SM00650 Ribosomal RNA adenine dimethylases Thit_0111 SM00382 ATPases associated with a variety of cellular activities Thit_0114 SM00900 Thit_0114 Thit_0121 SM00357 Cold shock protein domain Thit_0121 SM00382 ATPases associated with a variety of cellular activities Thit_0121 SM00959 Rho termination factor, N-terminal domain Thit_0126 SM00937 Thit_0126 Thit_0129 SM00226 Low molecular weight phosphatase family Thit_0137 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Thit_0137 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Thit_0153 SM00382 ATPases associated with a variety of cellular activities Thit_0158 SM00858 Thit_0158 Thit_0160 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Thit_0164 SM00382 ATPases associated with a variety of cellular activities Thit_0172 SM01350 Thit_0172 Thit_0188 SM00633 Glycosyl hydrolase family 10 Thit_0192 SM00633 Glycosyl hydrolase family 10 Thit_0198 SM01217 Thit_0198 Thit_0205 SM00344 helix_turn_helix ASNC type Thit_0206 SM00899 Thit_0206 Thit_0209 SM00382 ATPases associated with a variety of cellular activities Thit_0218 SM00382 ATPases associated with a variety of cellular activities Thit_0243 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0243 SM00387 Histidine kinase-like ATPases Thit_0244 SM00342 helix_turn_helix, arabinose operon control protein Thit_0244 SM00448 cheY-homologous receiver domain Thit_0247 SM00382 ATPases associated with a variety of cellular activities Thit_0280 SM00382 ATPases associated with a variety of cellular activities Thit_0288 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thit_0293 SM00382 ATPases associated with a variety of cellular activities Thit_0306 SM00287 Bacterial SH3 domain homologues Thit_0306 SM00854 Bacterial capsule synthesis protein PGA_cap Thit_0310 SM00354 helix_turn _helix lactose operon repressor Thit_0316 SM00382 ATPases associated with a variety of cellular activities Thit_0317 SM00382 ATPases associated with a variety of cellular activities Thit_0321 SM00382 ATPases associated with a variety of cellular activities Thit_0324 SM00382 ATPases associated with a variety of cellular activities Thit_0338 SM00981 Thit_0338 Thit_0341 SM00382 ATPases associated with a variety of cellular activities Thit_0363 SM01004 Delta-aminolevulinic acid dehydratase Thit_0366 SM00966 SpoVT / AbrB like domain Thit_0371 SM00382 ATPases associated with a variety of cellular activities Thit_0372 SM01329 Thit_0372 Thit_0384 SM00382 ATPases associated with a variety of cellular activities Thit_0387 SM00421 helix_turn_helix, Lux Regulon Thit_0389 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0391 SM00421 helix_turn_helix, Lux Regulon Thit_0397 SM00382 ATPases associated with a variety of cellular activities Thit_0399 SM00421 helix_turn_helix, Lux Regulon Thit_0407 SM00382 ATPases associated with a variety of cellular activities Thit_0409 SM00382 ATPases associated with a variety of cellular activities Thit_0416 SM00890 Domain of unknown function Thit_0417 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0419 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thit_0419 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0420 SM01221 Thit_0420 Thit_0420 SM01222 Thit_0420 Thit_0423 SM00642 Alpha-amylase domain Thit_0427 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0428 SM00342 helix_turn_helix, arabinose operon control protein Thit_0428 SM00448 cheY-homologous receiver domain Thit_0431 SM00382 ATPases associated with a variety of cellular activities Thit_0434 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thit_0434 SM00866 Thit_0434 Thit_0437 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Thit_0438 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thit_0442 SM01061 CAT RNA binding domain Thit_0453 SM00354 helix_turn _helix lactose operon repressor Thit_0454 SM00448 cheY-homologous receiver domain Thit_0454 SM00862 Transcriptional regulatory protein, C terminal Thit_0455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0455 SM00387 Histidine kinase-like ATPases Thit_0455 SM00388 His Kinase A (phosphoacceptor) domain Thit_0456 SM00909 Sporulation and spore germination Thit_0465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_0465 SM00382 ATPases associated with a variety of cellular activities Thit_0481 SM00858 Thit_0481 Thit_0483 SM00116 Domain in cystathionine beta-synthase and other proteins. Thit_0497 SM00382 ATPases associated with a variety of cellular activities Thit_0502 SM01007 Class II Aldolase and Adducin N-terminal domain Thit_0507 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thit_0507 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0509 SM00062 Bacterial periplasmic substrate-binding proteins Thit_0509 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Thit_0511 SM00382 ATPases associated with a variety of cellular activities Thit_0514 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0518 SM00957 SecA DEAD-like domain Thit_0518 SM00958 SecA preprotein cross-linking domain Thit_0520 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_0520 SM00732 Likely ribonuclease with RNase H fold. Thit_0527 SM00872 Alpha mannosidase, middle domain Thit_0542 SM00382 ATPases associated with a variety of cellular activities Thit_0545 SM00881 CoA binding domain Thit_0547 SM00448 cheY-homologous receiver domain Thit_0547 SM00850 LytTr DNA-binding domain Thit_0548 SM00387 Histidine kinase-like ATPases Thit_0549 SM00793 Accessory gene regulator B Thit_0554 SM00478 endonuclease III Thit_0563 SM00883 Chaperonin 10 Kd subunit Thit_0565 SM00116 Domain in cystathionine beta-synthase and other proteins. Thit_0565 SM01240 Thit_0565 Thit_0568 SM01001 AIR carboxylase Thit_0571 SM01211 Thit_0571 Thit_0576 SM00798 AICARFT/IMPCHase bienzyme Thit_0576 SM00851 MGS-like domain Thit_0577 SM01209 Thit_0577 Thit_0577 SM01210 Thit_0577 Thit_0582 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0582 SM00876 Biotin and Thiamin Synthesis associated domain Thit_0590 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_0590 SM00292 breast cancer carboxy-terminal domain Thit_0590 SM00532 Ligase N family Thit_0593 SM00845 GatB domain Thit_0595 SM00646 Thit_0595 Thit_0608 SM00382 ATPases associated with a variety of cellular activities Thit_0609 SM00382 ATPases associated with a variety of cellular activities Thit_0615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thit_0615 SM00091 PAS domain Thit_0615 SM00267 diguanylate cyclase Thit_0615 SM00448 cheY-homologous receiver domain Thit_0616 SM00448 cheY-homologous receiver domain Thit_0619 SM00382 ATPases associated with a variety of cellular activities Thit_0619 SM00994 ClpX C4-type zinc finger Thit_0619 SM01086 C-terminal, D2-small domain, of ClpB protein Thit_0620 SM00382 ATPases associated with a variety of cellular activities Thit_0620 SM00464 Found in ATP-dependent protease La (LON) Thit_0628 SM00382 ATPases associated with a variety of cellular activities Thit_0633 SM00382 ATPases associated with a variety of cellular activities Thit_0635 SM00028 Tetratricopeptide repeats Thit_0637 SM00116 Domain in cystathionine beta-synthase and other proteins. Thit_0637 SM00924 MgtE intracellular N domain Thit_0641 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thit_0661 SM00487 DEAD-like helicases superfamily Thit_0661 SM00490 helicase superfamily c-terminal domain Thit_0708 SM00422 helix_turn_helix, mercury resistance Thit_0713 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Thit_0713 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thit_0719 SM00831 Cation transporter/ATPase, N-terminus Thit_0720 SM00562 Thit_0720 Thit_0728 SM01001 AIR carboxylase Thit_0730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0730 SM00387 Histidine kinase-like ATPases Thit_0730 SM00388 His Kinase A (phosphoacceptor) domain Thit_0731 SM00448 cheY-homologous receiver domain Thit_0731 SM00862 Transcriptional regulatory protein, C terminal Thit_0753 SM00354 helix_turn _helix lactose operon repressor Thit_0760 SM00354 helix_turn _helix lactose operon repressor Thit_0770 SM00382 ATPases associated with a variety of cellular activities Thit_0771 SM00257 Lysin motif Thit_0777 SM01130 Thit_0777 Thit_0778 SM00859 Semialdehyde dehydrogenase, NAD binding domain Thit_0780 SM00382 ATPases associated with a variety of cellular activities Thit_0781 SM00382 ATPases associated with a variety of cellular activities Thit_0783 SM01230 Thit_0783 Thit_0784 SM00448 cheY-homologous receiver domain Thit_0784 SM01012 Thit_0784 Thit_0786 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thit_0802 SM00382 ATPases associated with a variety of cellular activities Thit_0805 SM00636 Thit_0805 Thit_0811 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Thit_0811 SM00475 5'-3' exonuclease Thit_0811 SM00482 DNA polymerase A domain Thit_0817 SM00287 Bacterial SH3 domain homologues Thit_0818 SM00838 Elongation factor G C-terminus Thit_0825 SM00481 DNA polymerase alpha chain like domain Thit_0827 SM00387 Histidine kinase-like ATPases Thit_0829 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Thit_0830 SM00902 Iron hydrogenase small subunit Thit_0830 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Thit_0842 SM00851 MGS-like domain Thit_0845 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0847 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_0857 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0864 SM00936 Penicillin-binding protein 5, C-terminal domain Thit_0865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_0877 SM00849 Metallo-beta-lactamase superfamily Thit_0878 SM00849 Metallo-beta-lactamase superfamily Thit_0890 SM00838 Elongation factor G C-terminus Thit_0891 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0895 SM00271 DnaJ molecular chaperone homology domain Thit_0902 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thit_0904 SM00448 cheY-homologous receiver domain Thit_0904 SM00862 Transcriptional regulatory protein, C terminal Thit_0905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0905 SM00387 Histidine kinase-like ATPases Thit_0905 SM00388 His Kinase A (phosphoacceptor) domain Thit_0912 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0919 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0921 SM00014 Acid phosphatase homologues Thit_0923 SM01133 Thit_0923 Thit_0930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_0931 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_0931 SM00357 Cold shock protein domain Thit_0931 SM00955 Thit_0931 Thit_0934 SM00028 Tetratricopeptide repeats Thit_0934 SM00530 Helix-turn-helix XRE-family like proteins Thit_0938 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0939 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0940 SM00382 ATPases associated with a variety of cellular activities Thit_0943 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0948 SM00419 helix_turn_helix, cAMP Regulatory protein Thit_0954 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_0955 SM00506 Appr-1"-p processing enzyme Thit_0961 SM00849 Metallo-beta-lactamase superfamily Thit_0962 SM00226 Low molecular weight phosphatase family Thit_0964 SM01350 Thit_0964 Thit_0977 SM00257 Lysin motif Thit_0981 SM00448 cheY-homologous receiver domain Thit_0981 SM00862 Transcriptional regulatory protein, C terminal Thit_0982 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_0982 SM00387 Histidine kinase-like ATPases Thit_0982 SM00388 His Kinase A (phosphoacceptor) domain Thit_0997 SM00881 CoA binding domain Thit_1002 SM00260 Two component signalling adaptor domain Thit_1005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_1006 SM00382 ATPases associated with a variety of cellular activities Thit_1011 SM01323 Thit_1011 Thit_1018 SM00220 Serine/Threonine protein kinases, catalytic domain Thit_1021 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_1021 SM00954 Region found in RelA / SpoT proteins Thit_1023 SM00849 Metallo-beta-lactamase superfamily Thit_1025 SM00382 ATPases associated with a variety of cellular activities Thit_1027 SM00347 helix_turn_helix multiple antibiotic resistance protein Thit_1041 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thit_1043 SM00732 Likely ribonuclease with RNase H fold. Thit_1046 SM00849 Metallo-beta-lactamase superfamily Thit_1056 SM00382 ATPases associated with a variety of cellular activities Thit_1057 SM00382 ATPases associated with a variety of cellular activities Thit_1066 SM00842 Cell division protein FtsA Thit_1070 SM00518 AP endonuclease family 2 Thit_1071 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Thit_1075 SM00841 Elongation factor P, C-terminal Thit_1075 SM01185 Thit_1075 Thit_1077 SM00382 ATPases associated with a variety of cellular activities Thit_1092 SM00861 Transketolase, pyrimidine binding domain Thit_1093 SM00363 S4 RNA-binding domain Thit_1098 SM00448 cheY-homologous receiver domain Thit_1109 SM00936 Penicillin-binding protein 5, C-terminal domain Thit_1111 SM00387 Histidine kinase-like ATPases Thit_1124 SM00936 Penicillin-binding protein 5, C-terminal domain Thit_1127 SM00363 S4 RNA-binding domain Thit_1132 SM00257 Lysin motif Thit_1139 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thit_1141 SM00855 Phosphoglycerate mutase family Thit_1146 SM00563 Phosphate acyltransferases Thit_1150 SM00138 Methyltransferase, chemotaxis proteins Thit_1151 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1152 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Thit_1152 SM00534 ATPase domain of DNA mismatch repair MUTS family Thit_1153 SM00853 MutL C terminal dimerisation domain Thit_1153 SM01340 Thit_1153 Thit_1160 SM00382 ATPases associated with a variety of cellular activities Thit_1161 SM00998 Adenylosuccinate lyase C-terminus Thit_1163 SM00481 DNA polymerase alpha chain like domain Thit_1166 SM00322 K homology RNA-binding domain Thit_1166 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_1168 SM00382 ATPases associated with a variety of cellular activities Thit_1169 SM00852 Probable molybdopterin binding domain Thit_1171 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1172 SM00382 ATPases associated with a variety of cellular activities Thit_1172 SM00843 Thit_1172 Thit_1181 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_1181 SM00322 K homology RNA-binding domain Thit_1182 SM01387 Thit_1182 Thit_1183 SM00904 Riboflavin kinase Thit_1190 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_1192 SM00479 Thit_1192 Thit_1192 SM00481 DNA polymerase alpha chain like domain Thit_1195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thit_1209 SM00260 Two component signalling adaptor domain Thit_1210 SM00073 Histidine Phosphotransfer domain Thit_1210 SM00260 Two component signalling adaptor domain Thit_1210 SM00387 Histidine kinase-like ATPases Thit_1210 SM01231 Thit_1210 Thit_1214 SM00382 ATPases associated with a variety of cellular activities Thit_1214 SM00962 SRP54-type protein, GTPase domain Thit_1221 SM00448 cheY-homologous receiver domain Thit_1232 SM00382 ATPases associated with a variety of cellular activities Thit_1241 SM00382 ATPases associated with a variety of cellular activities Thit_1241 SM01086 C-terminal, D2-small domain, of ClpB protein Thit_1243 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Thit_1243 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Thit_1243 SM00493 Thit_1243 Thit_1249 SM00382 ATPases associated with a variety of cellular activities Thit_1256 SM00382 ATPases associated with a variety of cellular activities Thit_1256 SM00962 SRP54-type protein, GTPase domain Thit_1256 SM00963 SRP54-type protein, helical bundle domain Thit_1258 SM00382 ATPases associated with a variety of cellular activities Thit_1258 SM00962 SRP54-type protein, GTPase domain Thit_1258 SM00963 SRP54-type protein, helical bundle domain Thit_1259 SM00968 SMC proteins Flexible Hinge Domain Thit_1262 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1265 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1265 SM00876 Biotin and Thiamin Synthesis associated domain Thit_1273 SM00938 Nitrogen regulatory protein P-II Thit_1275 SM01230 Thit_1275 Thit_1277 SM00358 Double-stranded RNA binding motif Thit_1277 SM00535 Ribonuclease III family Thit_1278 SM00825 Beta-ketoacyl synthase Thit_1279 SM00823 Phosphopantetheine attachment site Thit_1280 SM00822 Thit_1280 Thit_1281 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Thit_1298 SM00487 DEAD-like helicases superfamily Thit_1298 SM00490 helicase superfamily c-terminal domain Thit_1299 SM01120 Thit_1299 Thit_1299 SM01121 Thit_1299 Thit_1303 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Thit_1306 SM00220 Serine/Threonine protein kinases, catalytic domain Thit_1306 SM00740 Thit_1306 Thit_1307 SM00331 Sigma factor PP2C-like phosphatases Thit_1307 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Thit_1315 SM00487 DEAD-like helicases superfamily Thit_1315 SM00490 helicase superfamily c-terminal domain Thit_1317 SM01409 Thit_1317 Thit_1318 SM00072 Guanylate kinase homologues. Thit_1327 SM00382 ATPases associated with a variety of cellular activities Thit_1327 SM00930 Thit_1327 Thit_1332 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Thit_1337 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Thit_1342 SM00363 S4 RNA-binding domain Thit_1345 SM00028 Tetratricopeptide repeats Thit_1363 SM00460 Transglutaminase/protease-like homologues Thit_1369 SM00646 Thit_1369 Thit_1404 SM00382 ATPases associated with a variety of cellular activities Thit_1412 SM00530 Helix-turn-helix XRE-family like proteins Thit_1413 SM00530 Helix-turn-helix XRE-family like proteins Thit_1435 SM01007 Class II Aldolase and Adducin N-terminal domain Thit_1442 SM00363 S4 RNA-binding domain Thit_1455 SM01207 Thit_1455 Thit_1465 SM00382 ATPases associated with a variety of cellular activities Thit_1469 SM00091 PAS domain Thit_1469 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_1469 SM00387 Histidine kinase-like ATPases Thit_1469 SM00388 His Kinase A (phosphoacceptor) domain Thit_1470 SM00448 cheY-homologous receiver domain Thit_1470 SM00862 Transcriptional regulatory protein, C terminal Thit_1476 SM00864 Tubulin/FtsZ family, GTPase domain Thit_1476 SM00865 Tubulin/FtsZ family, C-terminal domain Thit_1477 SM00842 Cell division protein FtsA Thit_1488 SM00740 Thit_1488 Thit_1497 SM00981 Thit_1497 Thit_1502 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1509 SM00421 helix_turn_helix, Lux Regulon Thit_1509 SM00448 cheY-homologous receiver domain Thit_1510 SM00387 Histidine kinase-like ATPases Thit_1513 SM00463 Small MutS-related domain Thit_1513 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Thit_1513 SM00534 ATPase domain of DNA mismatch repair MUTS family Thit_1516 SM00873 B3/4 domain Thit_1516 SM00874 tRNA synthetase B5 domain Thit_1516 SM00896 Ferredoxin-fold anticodon binding domain Thit_1518 SM00967 RNA 2'-O ribose methyltransferase substrate binding Thit_1524 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thit_1530 SM00357 Cold shock protein domain Thit_1535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thit_1547 SM00400 zinc finger Thit_1547 SM00493 Thit_1547 Thit_1548 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_1551 SM01192 Thit_1551 Thit_1551 SM01193 Thit_1551 Thit_1555 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Thit_1561 SM01208 Thit_1561 Thit_1562 SM00478 endonuclease III Thit_1562 SM00525 Thit_1562 Thit_1567 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1568 SM00382 ATPases associated with a variety of cellular activities Thit_1575 SM01130 Thit_1575 Thit_1577 SM00481 DNA polymerase alpha chain like domain Thit_1580 SM00861 Transketolase, pyrimidine binding domain Thit_1583 SM00382 ATPases associated with a variety of cellular activities Thit_1589 SM00382 ATPases associated with a variety of cellular activities Thit_1590 SM01207 Thit_1590 Thit_1600 SM01018 B12 binding domain Thit_1620 SM00917 LeuA allosteric (dimerisation) domain Thit_1623 SM00116 Domain in cystathionine beta-synthase and other proteins. Thit_1623 SM00382 ATPases associated with a variety of cellular activities Thit_1624 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thit_1632 SM00481 DNA polymerase alpha chain like domain Thit_1633 SM00116 Domain in cystathionine beta-synthase and other proteins. Thit_1637 SM00642 Alpha-amylase domain Thit_1644 SM00632 Thit_1644 Thit_1644 SM00642 Alpha-amylase domain Thit_1647 SM00481 DNA polymerase alpha chain like domain Thit_1663 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thit_1666 SM00899 Thit_1666 Thit_1667 SM00899 Thit_1667 Thit_1671 SM00382 ATPases associated with a variety of cellular activities Thit_1675 SM00729 Elongator protein 3, MiaB family, Radical SAM Thit_1675 SM00876 Biotin and Thiamin Synthesis associated domain Thit_1676 SM00849 Metallo-beta-lactamase superfamily Thit_1687 SM00354 helix_turn _helix lactose operon repressor Thit_1689 SM00640 Glycosyl hydrolases family 32 Thit_1701 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thit_1702 SM01007 Class II Aldolase and Adducin N-terminal domain Thit_1707 SM00382 ATPases associated with a variety of cellular activities Thit_1708 SM00382 ATPases associated with a variety of cellular activities Thit_1713 SM00872 Alpha mannosidase, middle domain Thit_1714 SM00342 helix_turn_helix, arabinose operon control protein Thit_1721 SM00419 helix_turn_helix, cAMP Regulatory protein Thit_1727 SM00710 Parallel beta-helix repeats Thit_1735 SM00710 Parallel beta-helix repeats Thit_1743 SM01350 Thit_1743 Thit_1747 SM00420 helix_turn_helix, Deoxyribose operon repressor Thit_1747 SM01134 Thit_1747 Thit_1753 SM00354 helix_turn _helix lactose operon repressor Thit_1763 SM00481 DNA polymerase alpha chain like domain Thit_1766 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_1766 SM00465 GIY-YIG type nucleases (URI domain) Thit_1769 SM00240 Forkhead associated domain Thit_1770 SM00382 ATPases associated with a variety of cellular activities Thit_1771 SM00487 DEAD-like helicases superfamily Thit_1771 SM00490 helicase superfamily c-terminal domain Thit_1773 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thit_1774 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thit_1774 SM00245 tail specific protease Thit_1777 SM00382 ATPases associated with a variety of cellular activities Thit_1779 SM00382 ATPases associated with a variety of cellular activities Thit_1789 SM00842 Cell division protein FtsA Thit_1791 SM00382 ATPases associated with a variety of cellular activities Thit_1795 SM01120 Thit_1795 Thit_1797 SM00091 PAS domain Thit_1797 SM00382 ATPases associated with a variety of cellular activities Thit_1830 SM00382 ATPases associated with a variety of cellular activities Thit_1831 SM01068 Putative carbohydrate binding domain Thit_1839 SM00448 cheY-homologous receiver domain Thit_1840 SM00448 cheY-homologous receiver domain Thit_1841 SM00028 Tetratricopeptide repeats Thit_1841 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain Thit_1844 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thit_1844 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thit_1844 SM00091 PAS domain Thit_1844 SM00387 Histidine kinase-like ATPases Thit_1847 SM00861 Transketolase, pyrimidine binding domain Thit_1856 SM01005 Alanine racemase, C-terminal domain Thit_1862 SM00530 Helix-turn-helix XRE-family like proteins Thit_1866 SM00257 Lysin motif Thit_1867 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Thit_1879 SM00530 Helix-turn-helix XRE-family like proteins Thit_1880 SM00530 Helix-turn-helix XRE-family like proteins Thit_1908 SM00563 Phosphate acyltransferases Thit_1917 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thit_1922 SM00749 bacterial OsmY and nodulation domain Thit_1926 SM00646 Thit_1926 Thit_1927 SM00257 Lysin motif Thit_1941 SM00382 ATPases associated with a variety of cellular activities Thit_1942 SM00382 ATPases associated with a variety of cellular activities Thit_1944 SM00662 RNA polymerases D Thit_1945 SM00363 S4 RNA-binding domain Thit_1945 SM01390 Thit_1945 Thit_1949 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_1961 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thit_1962 SM01374 Thit_1962 Thit_1966 SM00322 K homology RNA-binding domain Thit_1970 SM01382 Thit_1970 Thit_1970 SM01383 Thit_1970 Thit_1976 SM01403 Thit_1976 Thit_1978 SM00838 Elongation factor G C-terminus Thit_1978 SM00889 Elongation factor G, domain IV Thit_1982 SM00663 RNA polymerase I subunit A N-terminus Thit_1987 SM00649 Ribosomal protein L11/L12 Thit_1988 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Thit_1988 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thit_1994 SM00967 RNA 2'-O ribose methyltransferase substrate binding Thit_1996 SM00840 Thit_1996 Thit_2004 SM00670 Large family of predicted nucleotide-binding domains Thit_2006 SM00382 ATPases associated with a variety of cellular activities Thit_2013 SM00529 Helix-turn-helix diphteria tox regulatory element Thit_2014 SM00382 ATPases associated with a variety of cellular activities Thit_2014 SM01086 C-terminal, D2-small domain, of ClpB protein Thit_2019 SM00919 Malic enzyme, NAD binding domain Thit_2019 SM01274 Thit_2019 Thit_2021 SM00838 Elongation factor G C-terminus Thit_2021 SM00889 Elongation factor G, domain IV Thit_2028 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thit_2028 SM00267 diguanylate cyclase Thit_2056 SM00091 PAS domain Thit_2056 SM00387 Histidine kinase-like ATPases Thit_2056 SM00388 His Kinase A (phosphoacceptor) domain Thit_2057 SM00382 ATPases associated with a variety of cellular activities Thit_2059 SM00977 TilS substrate C-terminal domain Thit_2060 SM00331 Sigma factor PP2C-like phosphatases Thit_2065 SM00382 ATPases associated with a variety of cellular activities Thit_2072 SM00646 Thit_2072 Thit_2074 SM00052 Putative diguanylate phosphodiesterase Thit_2074 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thit_2074 SM00091 PAS domain Thit_2074 SM00267 diguanylate cyclase Thit_2079 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thit_2082 SM00448 cheY-homologous receiver domain Thit_2082 SM00862 Transcriptional regulatory protein, C terminal Thit_2096 SM00530 Helix-turn-helix XRE-family like proteins Thit_2100 SM01022 Thit_2100 Thit_2104 SM00640 Glycosyl hydrolases family 32 Thit_2107 SM00640 Glycosyl hydrolases family 32 Thit_2108 SM00560 LamG-like jellyroll fold domain Thit_2108 SM00640 Glycosyl hydrolases family 32 Thit_2113 SM00354 helix_turn _helix lactose operon repressor Thit_2116 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thit_2129 SM00316 Ribosomal protein S1-like RNA-binding domain Thit_2132 SM00116 Domain in cystathionine beta-synthase and other proteins. Thit_2132 SM01131 Thit_2132 Thit_2137 SM00363 S4 RNA-binding domain Thit_2138 SM00411 bacterial (prokaryotic) histone like domain Thit_2140 SM00028 Tetratricopeptide repeats Thit_2140 SM00530 Helix-turn-helix XRE-family like proteins Thit_2142 SM00173 Ras subfamily of RAS small GTPases Thit_2146 SM00900 Thit_2146 Thit_2153 SM00855 Phosphoglycerate mutase family Thit_2156 SM00831 Cation transporter/ATPase, N-terminus Thit_2159 SM00382 ATPases associated with a variety of cellular activities Thit_2160 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thit_2167 SM00851 MGS-like domain Thit_2167 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Thit_2168 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Thit_2172 SM00859 Semialdehyde dehydrogenase, NAD binding domain Thit_2174 SM00331 Sigma factor PP2C-like phosphatases Thit_2175 SM00091 PAS domain Thit_2177 SM00829 Enoylreductase Thit_2180 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thit_2180 SM00481 DNA polymerase alpha chain like domain Thit_2180 SM00483 DNA polymerase X family Thit_2181 SM00831 Cation transporter/ATPase, N-terminus Thit_2198 SM00014 Acid phosphatase homologues Thit_2200 SM00382 ATPases associated with a variety of cellular activities Thit_2201 SM00382 ATPases associated with a variety of cellular activities Thit_2202 SM00347 helix_turn_helix multiple antibiotic resistance protein Thit_2211 SM00382 ATPases associated with a variety of cellular activities Thit_2212 SM00382 ATPases associated with a variety of cellular activities Thit_2214 SM00836 DALR anticodon binding domain Thit_2214 SM01016 Arginyl tRNA synthetase N terminal dom Thit_2226 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thit_2226 SM00895 Thit_2226 Thit_2228 SM00257 Lysin motif Thit_2231 SM00966 SpoVT / AbrB like domain Thit_2233 SM00487 DEAD-like helicases superfamily Thit_2233 SM00490 helicase superfamily c-terminal domain Thit_2233 SM00982 Thit_2233 Thit_2233 SM01058 CarD-like/TRCF domain Thit_2236 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thit_2237 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_2237 SM00387 Histidine kinase-like ATPases Thit_2237 SM00388 His Kinase A (phosphoacceptor) domain Thit_2238 SM00448 cheY-homologous receiver domain Thit_2238 SM00862 Transcriptional regulatory protein, C terminal Thit_2239 SM01400 Thit_2239 Thit_2244 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thit_2246 SM00354 helix_turn _helix lactose operon repressor Thit_2255 SM00420 helix_turn_helix, Deoxyribose operon repressor Thit_2255 SM01134 Thit_2255 Thit_2260 SM00670 Large family of predicted nucleotide-binding domains Thit_2264 SM00849 Metallo-beta-lactamase superfamily Thit_2264 SM01027 Beta-Casp domain Thit_2269 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thit_2269 SM00245 tail specific protease Thit_2276 SM00849 Metallo-beta-lactamase superfamily Thit_2284 SM00487 DEAD-like helicases superfamily Thit_2291 SM00636 Thit_2291 Thit_2296 SM00382 ATPases associated with a variety of cellular activities Thit_2297 SM00883 Chaperonin 10 Kd subunit Thit_2306 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thit_2312 SM00448 cheY-homologous receiver domain Thit_2312 SM00862 Transcriptional regulatory protein, C terminal Thit_2314 SM00257 Lysin motif Thit_2314 SM01208 Thit_2314 Thit_2316 SM00382 ATPases associated with a variety of cellular activities Thit_2319 SM00849 Metallo-beta-lactamase superfamily Thit_2321 SM00788 Adenylosuccinate synthetase Thit_2323 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thit_2323 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thit_2333 SM00382 ATPases associated with a variety of cellular activities Thit_2345 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thit_2346 SM00382 ATPases associated with a variety of cellular activities Thit_2350 SM00382 ATPases associated with a variety of cellular activities Thit_2357 SM00530 Helix-turn-helix XRE-family like proteins Thit_2364 SM00382 ATPases associated with a variety of cellular activities Thit_2376 SM00028 Tetratricopeptide repeats Thit_2376 SM00530 Helix-turn-helix XRE-family like proteins Thit_2378 SM00100 Cyclic nucleotide-monophosphate binding domain Thit_2378 SM00419 helix_turn_helix, cAMP Regulatory protein Thit_2379 SM00382 ATPases associated with a variety of cellular activities Thit_2395 SM00470 ParB-like nuclease domain Thit_2397 SM00470 ParB-like nuclease domain Thit_2401 SM01228 Thit_2401 Thit_2403 SM00393 Putative single-stranded nucleic acids-binding domain Thit_2403 SM01245 Thit_2403 Thit_2405 SM01234 Thit_2405