locus-tag	class	description
OEI98_000002	COG0592	DNA-directed DNA polymerase activity
OEI98_000003	COG2501	S4 domain
OEI98_000009	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OEI98_000010	COG0187	DNA topoisomerase II activity
OEI98_000011	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OEI98_000012	COG1902	pentaerythritol trinitrate reductase activity
OEI98_000013	COG0440	acetolactate synthase activity
OEI98_000014	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OEI98_000015	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OEI98_000016	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
OEI98_000017	COG0066	3-isopropylmalate dehydratase activity
OEI98_000018	COG0473	3-isopropylmalate dehydrogenase activity
OEI98_000019	COG0129	dihydroxy-acid dehydratase activity
OEI98_000020	COG0028	Belongs to the TPP enzyme family
OEI98_000024	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
OEI98_000025	COG0628	permease
OEI98_000031	COG1316	TRANSCRIPTIONal
OEI98_000036	COG1863	multisubunit Na H antiporter MnhE subunit
OEI98_000042	COG0651	ATP synthesis coupled electron transport
OEI98_000043	COG0651	ATP synthesis coupled electron transport
OEI98_000044	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
OEI98_000046	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OEI98_000047	COG0649	NAD binding
OEI98_000047	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OEI98_000049	COG0649	NAD binding
OEI98_000056	COG2199	diguanylate cyclase activity
OEI98_000056	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OEI98_000057	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OEI98_000059	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
OEI98_000060	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OEI98_000061	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OEI98_000062	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OEI98_000071	COG1028	Short-chain dehydrogenase reductase Sdr
OEI98_000072	COG1187	pseudouridine synthase activity
OEI98_000073	COG1609	Transcriptional regulator
OEI98_000074	COG1653	transport
OEI98_000075	COG1175	transmembrane transport
OEI98_000076	COG0395	ABC-type sugar transport system, permease component
OEI98_000079	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
OEI98_000080	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
OEI98_000082	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OEI98_000085	COG1181	Belongs to the D-alanine--D-alanine ligase family
OEI98_000086	COG1028	Short-chain dehydrogenase reductase Sdr
OEI98_000088	COG1511	domain protein
OEI98_000090	COG0037	tRNA processing
OEI98_000092	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
OEI98_000092	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
OEI98_000094	COG1573	uracil-dna glycosylase
OEI98_000100	COG0425	Belongs to the sulfur carrier protein TusA family
OEI98_000101	COG2391	methyltransferase activity
OEI98_000105	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OEI98_000106	COG0509	glycine decarboxylation via glycine cleavage system
OEI98_000108	COG0519	Catalyzes the synthesis of GMP from XMP
OEI98_000110	COG1982	Orn Lys Arg decarboxylase major
OEI98_000112	COG3870	Protein conserved in bacteria
OEI98_000114	COG0470	DNA polymerase III
OEI98_000115	COG1774	PSP1 C-terminal conserved region
OEI98_000117	COG0730	response to heat
OEI98_000119	COG2235	arginine
OEI98_000120	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
OEI98_000121	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OEI98_000122	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OEI98_000123	COG2002	toxin-antitoxin pair type II binding
OEI98_000124	COG2715	membrane protein required for spore maturation
OEI98_000125	COG0700	Nucleoside recognition
OEI98_000126	COG0617	tRNA 3'-terminal CCA addition
OEI98_000128	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OEI98_000128	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OEI98_000129	COG0084	hydrolase, TatD family'
OEI98_000130	COG3584	3D domain protein
OEI98_000130	COG3583	domain protein
OEI98_000131	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
OEI98_000136	COG4447	cellulose binding
OEI98_000137	COG1191	sigma factor activity
OEI98_000138	COG2151	metal-sulfur cluster biosynthetic enzyme
OEI98_000138	COG0489	protein tyrosine kinase activity
OEI98_000141	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OEI98_000142	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OEI98_000142	COG2111	Na H antiporter
OEI98_000143	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
OEI98_000144	COG3260	NADH ubiquinone oxidoreductase 20
OEI98_000147	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OEI98_000148	COG0375	protein maturation
OEI98_000151	COG0298	carbon dioxide binding
OEI98_000152	COG0409	Hydrogenase expression formation protein
OEI98_000156	COG0745	RESPONSE REGULATOR receiver
OEI98_000161	COG3872	metal-dependent enzyme
OEI98_000162	COG2890	protein-(glutamine-N5) methyltransferase activity
OEI98_000164	COG0428	transporter
OEI98_000167	COG0698	ribose 5-phosphate isomerase
OEI98_000170	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OEI98_000171	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OEI98_000174	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
OEI98_000177	COG0686	Belongs to the AlaDH PNT family
OEI98_000184	COG1361	Conserved repeat domain
OEI98_000185	COG2385	sporulation resulting in formation of a cellular spore
OEI98_000187	COG1609	Transcriptional regulator
OEI98_000189	COG4786	Flagellar basal body rod
OEI98_000192	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OEI98_000196	COG1496	oxidoreductase activity
OEI98_000200	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_000201	COG3414	Phosphotransferase system galactitol-specific IIB component
OEI98_000202	COG3775	system Galactitol-specific IIC component
OEI98_000204	COG1063	alcohol dehydrogenase
OEI98_000206	COG3959	Transketolase, thiamine diphosphate binding domain
OEI98_000209	COG0698	ribose 5-phosphate isomerase
OEI98_000210	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OEI98_000211	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OEI98_000212	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OEI98_000216	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OEI98_000217	COG3715	PTS system
OEI98_000218	COG3716	PTS system mannose fructose sorbose family IID component
OEI98_000222	COG2222	sugar isomerase
OEI98_000223	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OEI98_000224	COG0569	domain protein
OEI98_000225	COG1082	Xylose isomerase domain protein TIM barrel
OEI98_000226	COG2115	Belongs to the xylose isomerase family
OEI98_000227	COG1070	Carbohydrate kinase
OEI98_000228	COG1653	transport
OEI98_000230	COG0395	ABC-type sugar transport system, permease component
OEI98_000232	COG2723	6-phospho-beta-galactosidase activity
OEI98_000236	COG1737	Transcriptional regulator
OEI98_000238	COG1263	PTS System
OEI98_000238	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OEI98_000241	COG2188	Transcriptional regulator
OEI98_000245	COG0626	cystathionine gamma-synthase activity
OEI98_000246	COG3457	Alanine racemase
OEI98_000247	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
OEI98_000248	COG2086	electron transfer activity
OEI98_000251	COG1297	OPT oligopeptide transporter protein
OEI98_000253	COG0436	Aminotransferase
OEI98_000254	COG1522	sequence-specific DNA binding
OEI98_000256	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OEI98_000256	COG1918	ferrous iron import across plasma membrane
OEI98_000257	COG1122	ATPase activity
OEI98_000258	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OEI98_000259	COG0310	cobalt ion transport
OEI98_000260	COG0310	cobalt ion transport
OEI98_000261	COG0864	Transcriptional regulator
OEI98_000262	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
OEI98_000265	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OEI98_000266	COG0534	Mate efflux family protein
OEI98_000267	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OEI98_000268	COG1136	(ABC) transporter
OEI98_000269	COG0577	efflux transmembrane transporter activity
OEI98_000269	COG1136	(ABC) transporter
OEI98_000272	COG0179	Fumarylacetoacetate (FAA) hydrolase
OEI98_000276	COG1074	ATP-dependent DNA helicase activity
OEI98_000277	COG0420	3'-5' exonuclease activity
OEI98_000278	COG0419	ATPase involved in DNA repair
OEI98_000280	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
OEI98_000281	COG0450	alkyl hydroperoxide reductase
OEI98_000287	COG0297	glycogen (starch) synthase activity
OEI98_000288	COG0586	Pfam SNARE associated Golgi protein
OEI98_000299	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
OEI98_000300	COG1980	fructose-bisphosphate aldolase activity
OEI98_000302	COG2972	Histidine kinase
OEI98_000303	COG2197	response regulator
OEI98_000304	COG4213	ABC transporter substrate-binding protein
OEI98_000305	COG4213	ABC transporter substrate-binding protein
OEI98_000307	COG4214	carbohydrate transport
OEI98_000308	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
OEI98_000309	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
OEI98_000312	COG0095	Lipoate-protein ligase
OEI98_000314	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OEI98_000316	COG0436	Aminotransferase
OEI98_000317	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_000317	COG3711	transcriptional antiterminator
OEI98_000322	COG1735	metal-dependent hydrolase with the TIM-barrel fold
OEI98_000325	COG1979	alcohol dehydrogenase
OEI98_000330	COG0640	Transcriptional regulator
OEI98_000333	COG1309	transcriptional regulator
OEI98_000336	COG1924	4 iron, 4 sulfur cluster binding
OEI98_000337	COG1230	cation diffusion facilitator family transporter
OEI98_000339	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
OEI98_000340	COG0390	transport system, permease component
OEI98_000341	COG0495	leucyl-tRNA aminoacylation
OEI98_000342	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
OEI98_000344	COG1522	sequence-specific DNA binding
OEI98_000344	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OEI98_000345	COG2313	pseudouridylate synthase activity
OEI98_000348	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OEI98_000348	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OEI98_000350	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OEI98_000351	COG1447	Phosphotransferase system cellobiose-specific component IIA
OEI98_000352	COG1486	melibiose metabolic process
OEI98_000353	COG2723	6-phospho-beta-galactosidase activity
OEI98_000360	COG2213	PTS system mannitol-specific
OEI98_000361	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_000361	COG3711	transcriptional antiterminator
OEI98_000363	COG0246	Mannitol dehydrogenase
OEI98_000364	COG0737	Belongs to the 5'-nucleotidase family
OEI98_000365	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
OEI98_000366	COG0730	response to heat
OEI98_000370	COG1609	Transcriptional regulator
OEI98_000371	COG4166	transmembrane transport
OEI98_000372	COG0601	transmembrane transport
OEI98_000373	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OEI98_000374	COG0444	Belongs to the ABC transporter superfamily
OEI98_000375	COG4608	Belongs to the ABC transporter superfamily
OEI98_000376	COG4608	Belongs to the ABC transporter superfamily
OEI98_000377	COG3250	beta-galactosidase activity
OEI98_000378	COG2723	6-phospho-beta-galactosidase activity
OEI98_000379	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OEI98_000380	COG1121	(ABC) transporter
OEI98_000381	COG0803	Belongs to the bacterial solute-binding protein 9 family
OEI98_000382	COG0735	belongs to the Fur family
OEI98_000383	COG0714	Associated with various cellular activities
OEI98_000386	COG1704	LemA family
OEI98_000391	COG0084	hydrolase, TatD family'
OEI98_000393	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OEI98_000394	COG0822	iron-sulfur transferase activity
OEI98_000401	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OEI98_000402	COG1120	ATPase activity
OEI98_000403	COG1797	cobyrinic acid a,c-diamide synthase activity
OEI98_000408	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OEI98_000410	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
OEI98_000412	COG1648	precorrin-2 dehydrogenase activity
OEI98_000412	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OEI98_000416	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
OEI98_000420	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
OEI98_000420	COG0456	acetyltransferase
OEI98_000422	COG4555	ABC transporter
OEI98_000427	COG4555	ABC transporter
OEI98_000438	COG1105	Belongs to the carbohydrate kinase PfkB family
OEI98_000442	COG4555	ABC transporter
OEI98_000446	COG1131	(ABC) transporter
OEI98_000449	COG4555	ABC transporter
OEI98_000450	COG1668	transmembrane transport
OEI98_000479	COG1131	(ABC) transporter
OEI98_000492	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OEI98_000492	COG2199	diguanylate cyclase activity
OEI98_000493	COG0840	transmembrane signaling receptor activity
OEI98_000494	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
OEI98_000495	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
OEI98_000497	COG1228	amidohydrolase
OEI98_000498	COG1228	amidohydrolase
OEI98_000499	COG3404	Formiminotransferase-cyclodeaminase
OEI98_000500	COG1744	ABC transporter substrate-binding protein PnrA-like
OEI98_000502	COG4603	Belongs to the binding-protein-dependent transport system permease family
OEI98_000503	COG1079	Belongs to the binding-protein-dependent transport system permease family
OEI98_000504	COG2188	Transcriptional regulator
OEI98_000509	COG0840	transmembrane signaling receptor activity
OEI98_000512	COG1263	PTS System
OEI98_000512	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OEI98_000512	COG2190	(PTS) system
OEI98_000513	COG2190	(PTS) system
OEI98_000514	COG3711	transcriptional antiterminator
OEI98_000521	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
OEI98_000523	COG2323	membrane
OEI98_000524	COG0561	phosphatase activity
OEI98_000526	COG0745	RESPONSE REGULATOR receiver
OEI98_000527	COG5002	protein histidine kinase activity
OEI98_000535	COG1592	Rubrerythrin
OEI98_000536	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
OEI98_000538	COG1040	competence protein
OEI98_000542	COG1256	bacterial-type flagellum assembly
OEI98_000542	COG4786	Flagellar basal body rod
OEI98_000543	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
OEI98_000545	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
OEI98_000546	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OEI98_000547	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
OEI98_000549	COG0463	Glycosyl transferase, family 2
OEI98_000549	COG0457	Tetratricopeptide repeat
OEI98_000561	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
OEI98_000565	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OEI98_000565	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OEI98_000566	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OEI98_000566	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OEI98_000567	COG2213	PTS system mannitol-specific
OEI98_000567	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_000568	COG3414	Phosphotransferase system galactitol-specific IIB component
OEI98_000569	COG3775	system Galactitol-specific IIC component
OEI98_000571	COG1105	Belongs to the carbohydrate kinase PfkB family
OEI98_000577	COG0840	transmembrane signaling receptor activity
OEI98_000579	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OEI98_000580	COG0765	amino acid transport
OEI98_000586	COG1827	regulation of RNA biosynthetic process
OEI98_000590	COG2183	response to ionizing radiation
OEI98_000592	COG0398	Pfam SNARE associated Golgi protein
OEI98_000594	COG2235	arginine
OEI98_000595	COG2235	arginine
OEI98_000596	COG2235	arginine
OEI98_000597	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
OEI98_000598	COG0549	Belongs to the carbamate kinase family
OEI98_000600	COG0802	atpase or kinase
OEI98_000601	COG1214	PFAM Peptidase M22, glycoprotease
OEI98_000603	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
OEI98_000605	COG0488	(ABC) transporter
OEI98_000606	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
OEI98_000609	COG1024	Enoyl-CoA hydratase
OEI98_000610	COG1960	acyl-CoA dehydrogenase activity
OEI98_000611	COG2086	electron transfer activity
OEI98_000613	COG1250	3-hydroxyacyl-CoA dehydrogenase
OEI98_000615	COG0183	Belongs to the thiolase family
OEI98_000617	COG2030	dehydratase
OEI98_000624	COG2267	carboxylic ester hydrolase activity
OEI98_000626	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OEI98_000629	COG0596	Alpha beta hydrolase
OEI98_000631	COG0840	transmembrane signaling receptor activity
OEI98_000632	COG3426	butyrate kinase activity
OEI98_000637	COG3279	Response regulator of the LytR AlgR family
OEI98_000638	COG3290	protein histidine kinase activity
OEI98_000643	COG0493	'glutamate synthase
OEI98_000644	COG0424	maF-like protein
OEI98_000647	COG1404	Belongs to the peptidase S8 family
OEI98_000651	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OEI98_000658	COG3344	reverse transcriptase
OEI98_000659	COG0516	GMP reductase activity
OEI98_000659	COG0517	IMP dehydrogenase activity
OEI98_000660	COG0518	GMP synthase (glutamine-hydrolyzing) activity
OEI98_000660	COG0519	Catalyzes the synthesis of GMP from XMP
OEI98_000661	COG2252	PERMEase
OEI98_000662	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
OEI98_000664	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OEI98_000665	COG0047	phosphoribosylformylglycinamidine synthase activity
OEI98_000666	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OEI98_000668	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
OEI98_000669	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
OEI98_000671	COG0151	Belongs to the GarS family
OEI98_000673	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OEI98_000675	COG2244	polysaccharide biosynthetic process
OEI98_000677	COG3711	transcriptional antiterminator
OEI98_000679	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OEI98_000680	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
OEI98_000681	COG1447	Phosphotransferase system cellobiose-specific component IIA
OEI98_000682	COG4496	protein, YerC YecD
OEI98_000683	COG0210	DNA helicase
OEI98_000687	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OEI98_000688	COG3344	reverse transcriptase
OEI98_000690	COG4166	transmembrane transport
OEI98_000691	COG0601	transmembrane transport
OEI98_000692	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OEI98_000693	COG0444	Belongs to the ABC transporter superfamily
OEI98_000694	COG4608	Belongs to the ABC transporter superfamily
OEI98_000698	COG0860	N-Acetylmuramoyl-L-alanine amidase
OEI98_000698	COG2247	cell wall binding repeat
OEI98_000714	COG0004	ammonium transporteR
OEI98_000715	COG0347	Belongs to the P(II) protein family
OEI98_000717	COG0505	Belongs to the CarA family
OEI98_000718	COG0067	glutamate synthase
OEI98_000720	COG0437	4 iron, 4 sulfur cluster binding
OEI98_000725	COG0351	phosphomethylpyrimidine kinase
OEI98_000726	COG0352	thiamine-phosphate diphosphorylase activity
OEI98_000731	COG0704	Plays a role in the regulation of phosphate uptake
OEI98_000740	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
OEI98_000741	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
OEI98_000744	COG0356	it plays a direct role in the translocation of protons across the membrane
OEI98_000745	COG0356	it plays a direct role in the translocation of protons across the membrane
OEI98_000746	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
OEI98_000747	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
OEI98_000748	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
OEI98_000749	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
OEI98_000750	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
OEI98_000751	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
OEI98_000752	COG0355	proton-transporting ATP synthase activity, rotational mechanism
OEI98_000756	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OEI98_000756	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
OEI98_000757	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OEI98_000758	COG1116	anion transmembrane transporter activity
OEI98_000769	COG1215	transferase activity, transferring glycosyl groups
OEI98_000773	COG0438	transferase activity, transferring glycosyl groups
OEI98_000775	COG0438	transferase activity, transferring glycosyl groups
OEI98_000779	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OEI98_000781	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
OEI98_000783	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OEI98_000784	COG1078	dGTPase activity
OEI98_000785	COG3465	dGTPase activity
OEI98_000789	COG1201	RNA secondary structure unwinding
OEI98_000790	COG0420	3'-5' exonuclease activity
OEI98_000792	COG0662	Cupin 2, conserved barrel domain protein
OEI98_000792	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
OEI98_000811	COG1401	restriction endodeoxyribonuclease activity
OEI98_000824	COG3464	Transposase
OEI98_000826	COG2161	toxin-antitoxin pair type II binding
OEI98_000831	COG1704	LemA family
OEI98_000832	COG0622	Phosphoesterase
OEI98_000833	COG4989	oxidoreductase activity
OEI98_000848	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
OEI98_000849	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
OEI98_000850	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
OEI98_000851	COG1607	acyl-coa hydrolase
OEI98_000852	COG3246	L-lysine catabolic process to acetate
OEI98_000853	COG0604	alcohol dehydrogenase
OEI98_000857	COG1193	negative regulation of DNA recombination
OEI98_000858	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
OEI98_000859	COG5012	cobalamin binding
OEI98_000860	COG0531	amino acid
OEI98_000861	COG0250	Participates in transcription elongation, termination and antitermination
OEI98_000863	COG1210	Utp--glucose-1-phosphate uridylyltransferase
OEI98_000865	COG3949	Membrane
OEI98_000870	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
OEI98_000873	COG2814	Major facilitator Superfamily
OEI98_000876	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OEI98_000877	COG0671	phosphoesterase, PA-phosphatase related
OEI98_000880	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OEI98_000881	COG0840	transmembrane signaling receptor activity
OEI98_000883	COG1691	(AIR) carboxylase
OEI98_000884	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
OEI98_000885	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
OEI98_000886	COG5002	protein histidine kinase activity
OEI98_000887	COG0745	RESPONSE REGULATOR receiver
OEI98_000892	COG0525	valine-tRNA ligase activity
OEI98_000894	COG0285	dihydrofolate synthase activity
OEI98_000900	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OEI98_000901	COG1609	Transcriptional regulator
OEI98_000903	COG1653	transport
OEI98_000904	COG1175	transmembrane transport
OEI98_000905	COG0395	ABC-type sugar transport system, permease component
OEI98_000906	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OEI98_000909	COG0395	ABC-type sugar transport system, permease component
OEI98_000912	COG1404	Belongs to the peptidase S8 family
OEI98_000913	COG3933	PFAM sigma-54 factor interaction domain-containing protein
OEI98_000913	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
OEI98_000914	COG3409	Peptidoglycan-binding domain 1 protein
OEI98_000914	COG3773	Cell wall hydrolase
OEI98_000917	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
OEI98_000920	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
OEI98_000922	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OEI98_000924	COG1132	(ABC) transporter
OEI98_000925	COG1132	(ABC) transporter
OEI98_000929	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OEI98_000930	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OEI98_000931	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OEI98_000933	COG0739	heme binding
OEI98_000941	COG1131	(ABC) transporter
OEI98_000943	COG0616	signal peptide processing
OEI98_000951	COG4475	Protein of unknown function (DUF436)
OEI98_000955	COG1983	PspC domain protein
OEI98_000956	COG0726	polysaccharide deacetylase
OEI98_000957	COG1113	amino acid transport
OEI98_000960	COG1966	Carbon starvation protein
OEI98_000961	COG3279	Response regulator of the LytR AlgR family
OEI98_000962	COG3275	phosphorelay sensor kinase activity
OEI98_000963	COG1595	DNA-templated transcription, initiation
OEI98_000965	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OEI98_000965	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OEI98_000971	COG0791	NLP P60 protein
OEI98_000972	COG1217	gtp-binding protein TYPA
OEI98_000973	COG0741	lytic transglycosylase activity
OEI98_000977	COG2878	Part of a membrane complex involved in electron transport
OEI98_000981	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OEI98_000981	COG4191	Histidine kinase
OEI98_000987	COG2003	Belongs to the UPF0758 family
OEI98_000988	COG1077	Cell shape determining protein MreB Mrl
OEI98_000993	COG2894	cell division
OEI98_000995	COG0772	Belongs to the SEDS family
OEI98_000997	COG0739	heme binding
OEI98_000998	COG0517	IMP dehydrogenase activity
OEI98_000998	COG1994	Peptidase M50
OEI98_001011	COG1713	HD superfamily hydrolase involved in NAD metabolism
OEI98_001012	COG1316	TRANSCRIPTIONal
OEI98_001013	COG0799	negative regulation of ribosome biogenesis
OEI98_001018	COG0367	asparagine synthase
OEI98_001019	COG1686	Belongs to the peptidase S11 family
OEI98_001020	COG1555	photosystem II stabilization
OEI98_001020	COG1596	polysaccharide export
OEI98_001022	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
OEI98_001030	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OEI98_001031	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OEI98_001034	COG4720	Psort location CytoplasmicMembrane, score
OEI98_001037	COG1234	tRNA 3'-trailer cleavage
OEI98_001038	COG2333	competence protein COMEC
OEI98_001038	COG0658	competence protein
OEI98_001040	COG0268	Binds directly to 16S ribosomal RNA
OEI98_001042	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
OEI98_001049	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OEI98_001050	COG1420	regulation of RNA biosynthetic process
OEI98_001051	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
OEI98_001052	COG0443	Heat shock 70 kDa protein
OEI98_001053	COG0484	heat shock protein binding
OEI98_001054	COG2264	protein methyltransferase activity
OEI98_001055	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OEI98_001056	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OEI98_001057	COG0537	adenosine 5'-monophosphoramidase activity
OEI98_001063	COG1702	phosphate starvation-inducible protein PhoH
OEI98_001064	COG1480	7TM receptor with intracellular HD hydrolase
OEI98_001066	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
OEI98_001071	COG0423	glycine-tRNA ligase activity
OEI98_001072	COG0517	IMP dehydrogenase activity
OEI98_001074	COG0574	Belongs to the PEP-utilizing enzyme family
OEI98_001074	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OEI98_001076	COG0557	exoribonuclease II activity
OEI98_001083	COG0535	radical SAM domain protein
OEI98_001085	COG0535	radical SAM domain protein
OEI98_001089	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OEI98_001090	COG4604	ABC transporter, ATP-binding protein
OEI98_001094	COG4555	ABC transporter
OEI98_001107	COG3464	Transposase
OEI98_001113	COG1132	(ABC) transporter
OEI98_001124	COG0693	protein deglycase activity
OEI98_001125	COG0583	DNA-binding transcription factor activity
OEI98_001127	COG2267	carboxylic ester hydrolase activity
OEI98_001131	COG0584	glycerophosphoryl diester phosphodiesterase
OEI98_001134	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
OEI98_001138	COG3069	C4-dicarboxylate transmembrane transporter activity
OEI98_001140	COG0426	domain, Protein
OEI98_001141	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OEI98_001143	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
OEI98_001144	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OEI98_001145	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
OEI98_001151	COG0077	Prephenate dehydratase
OEI98_001151	COG1605	Chorismate mutase
OEI98_001152	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OEI98_001155	COG0745	RESPONSE REGULATOR receiver
OEI98_001156	COG5002	protein histidine kinase activity
OEI98_001156	COG3850	Histidine kinase
OEI98_001159	COG2119	membrane
OEI98_001164	COG2205	protein histidine kinase activity
OEI98_001170	COG0363	glucosamine-6-phosphate deaminase activity
OEI98_001174	COG1136	(ABC) transporter
OEI98_001176	COG0785	Cytochrome C biogenesis protein
OEI98_001177	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OEI98_001178	COG3118	belongs to the thioredoxin family
OEI98_001179	COG1982	Orn Lys Arg decarboxylase major
OEI98_001195	COG1739	Uncharacterized protein family UPF0029
OEI98_001199	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OEI98_001201	COG0835	chemotaxis
OEI98_001203	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
OEI98_001207	COG2247	cell wall binding repeat
OEI98_001207	COG2385	sporulation resulting in formation of a cellular spore
OEI98_001208	COG2385	sporulation resulting in formation of a cellular spore
OEI98_001208	COG2247	cell wall binding repeat
OEI98_001210	COG0343	queuine tRNA-ribosyltransferase activity
OEI98_001214	COG0820	rRNA (adenine-C2-)-methyltransferase activity
OEI98_001215	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OEI98_001216	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OEI98_001217	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OEI98_001219	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
OEI98_001219	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OEI98_001220	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OEI98_001223	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OEI98_001224	COG0577	efflux transmembrane transporter activity
OEI98_001225	COG1136	(ABC) transporter
OEI98_001226	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OEI98_001229	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
OEI98_001231	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OEI98_001232	COG1937	Protein conserved in bacteria
OEI98_001234	COG3118	belongs to the thioredoxin family
OEI98_001235	COG3804	dihydrodipicolinate reductase
OEI98_001237	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OEI98_001239	COG5012	cobalamin binding
OEI98_001241	COG3457	Alanine racemase
OEI98_001242	COG3457	Alanine racemase
OEI98_001245	COG3464	Transposase
OEI98_001246	COG1959	2 iron, 2 sulfur cluster binding
OEI98_001249	COG0628	permease
OEI98_001251	COG4472	Bacterial protein of unknown function (DUF965)
OEI98_001252	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
OEI98_001253	COG3906	Belongs to the UPF0473 family
OEI98_001254	COG0735	belongs to the Fur family
OEI98_001255	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
OEI98_001256	COG3679	Belongs to the UPF0342 family
OEI98_001258	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
OEI98_001259	COG4122	O-methyltransferase activity
OEI98_001260	COG0826	peptidase U32
OEI98_001261	COG0768	penicillin binding
OEI98_001263	COG0546	phosphoglycolate phosphatase activity
OEI98_001264	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
OEI98_001267	COG1459	type II secretion system
OEI98_001268	COG4969	Belongs to the N-Me-Phe pilin family
OEI98_001269	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OEI98_001278	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
OEI98_001281	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
OEI98_001283	COG0006	proline dipeptidase activity
OEI98_001286	COG3854	ATPases associated with a variety of cellular activities
OEI98_001294	COG1302	Protein conserved in bacteria
OEI98_001296	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
OEI98_001297	COG1570	exodeoxyribonuclease VII activity
OEI98_001298	COG1722	exodeoxyribonuclease VII activity
OEI98_001302	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
OEI98_001304	COG1438	arginine binding
OEI98_001305	COG0497	DNA recombination
OEI98_001306	COG0750	zinc metalloprotease
OEI98_001314	COG1379	DNA repair
OEI98_001315	COG1300	Membrane
OEI98_001316	COG4974	Belongs to the 'phage' integrase family
OEI98_001318	COG1686	Belongs to the peptidase S11 family
OEI98_001319	COG1366	Belongs to the anti-sigma-factor antagonist family
OEI98_001322	COG3360	Dodecin
OEI98_001326	COG0517	IMP dehydrogenase activity
OEI98_001326	COG0617	tRNA 3'-terminal CCA addition
OEI98_001326	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OEI98_001327	COG1994	Peptidase M50
OEI98_001329	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
OEI98_001332	COG3874	Sporulation protein YtfJ
OEI98_001334	COG1686	Belongs to the peptidase S11 family
OEI98_001336	COG0445	tRNA wobble uridine modification
OEI98_001337	COG1187	pseudouridine synthase activity
OEI98_001342	COG1705	Flagellar rod assembly protein muramidase FlgJ
OEI98_001342	COG1388	LysM domain
OEI98_001346	COG0674	pyruvate-flavodoxin oxidoreductase activity
OEI98_001346	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OEI98_001347	COG1013	pyruvate-flavodoxin oxidoreductase activity
OEI98_001353	COG0406	alpha-ribazole phosphatase activity
OEI98_001354	COG2081	HI0933 family
OEI98_001360	COG0539	negative regulation of cytoplasmic translation
OEI98_001360	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
OEI98_001363	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OEI98_001364	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OEI98_001365	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
OEI98_001369	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OEI98_001372	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
OEI98_001374	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
OEI98_001376	COG0613	PHP domain protein
OEI98_001377	COG2359	stage V sporulation protein S
OEI98_001378	COG1692	metallophosphoesterase
OEI98_001381	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
OEI98_001382	COG1058	Belongs to the CinA family
OEI98_001382	COG1546	Belongs to the CinA family
OEI98_001383	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OEI98_001384	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OEI98_001385	COG1674	ftsk spoiiie
OEI98_001387	COG0740	serine-type endopeptidase activity
OEI98_001388	COG0527	aspartate kinase activity
OEI98_001391	COG0612	Peptidase, M16
OEI98_001392	COG0726	polysaccharide deacetylase
OEI98_001393	COG1185	polyribonucleotide nucleotidyltransferase activity
OEI98_001395	COG0196	riboflavin kinase activity
OEI98_001396	COG0196	riboflavin kinase activity
OEI98_001397	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OEI98_001398	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OEI98_001399	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
OEI98_001402	COG2740	Nucleic-acid-binding protein implicated in transcription termination
OEI98_001403	COG0195	Participates in both transcription termination and antitermination
OEI98_001404	COG0779	Required for maturation of 30S ribosomal subunits
OEI98_001405	COG2176	DNA-directed DNA polymerase activity
OEI98_001407	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
OEI98_001408	COG0750	zinc metalloprotease
OEI98_001409	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
OEI98_001410	COG4589	Belongs to the CDS family
OEI98_001411	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OEI98_001414	COG0528	UMP kinase activity
OEI98_001419	COG1191	sigma factor activity
OEI98_001420	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
OEI98_001421	COG1776	CheC inhibitor of MCP methylation
OEI98_001422	COG0835	chemotaxis
OEI98_001423	COG2198	Histidine kinase
OEI98_001423	COG0643	Histidine kinase
OEI98_001424	COG2201	protein-glutamate methylesterase activity
OEI98_001426	COG0455	bacterial-type flagellum organization
OEI98_001427	COG1419	protein localization to endoplasmic reticulum
OEI98_001428	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OEI98_001429	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OEI98_001430	COG1684	flagellar biosynthetic protein fliR
OEI98_001431	COG1987	bacterial-type flagellum assembly
OEI98_001432	COG1338	Plays a role in the flagellum-specific transport system
OEI98_001434	COG2201	protein-glutamate methylesterase activity
OEI98_001436	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OEI98_001438	COG1582	Flagellar protein (FlbD)
OEI98_001441	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
OEI98_001446	COG1157	protein secretion by the type III secretion system
OEI98_001448	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OEI98_001450	COG1677	Flagellar hook-basal body complex protein FliE
OEI98_001452	COG1815	bacterial-type flagellum-dependent cell motility
OEI98_001453	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
OEI98_001454	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
OEI98_001455	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
OEI98_001457	COG0758	DNA mediated transformation
OEI98_001457	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
OEI98_001458	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
OEI98_001459	COG0792	nuclease activity
OEI98_001460	COG0180	Tryptophanyl-tRNA synthetase
OEI98_001461	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OEI98_001492	COG1598	PFAM Uncharacterised protein family UPF0150
OEI98_001503	COG3464	Transposase
OEI98_001507	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OEI98_001510	COG2333	competence protein COMEC
OEI98_001510	COG0658	competence protein
OEI98_001513	COG2161	toxin-antitoxin pair type II binding
OEI98_001518	COG1475	DNA binding
OEI98_001526	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OEI98_001543	COG4969	Belongs to the N-Me-Phe pilin family
OEI98_001550	COG0629	single-stranded DNA binding
OEI98_001553	COG2088	sporulation resulting in formation of a cellular spore
OEI98_001558	COG0641	radical SAM
OEI98_001568	COG1475	DNA binding
OEI98_001598	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
OEI98_001613	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OEI98_001616	COG2165	general secretion pathway protein
OEI98_001624	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OEI98_001626	COG1459	type II secretion system
OEI98_001628	COG2165	general secretion pathway protein
OEI98_001632	COG0250	Participates in transcription elongation, termination and antitermination
OEI98_001637	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OEI98_001651	COG3620	sequence-specific DNA binding
OEI98_001654	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OEI98_001658	COG0336	Belongs to the RNA methyltransferase TrmD family
OEI98_001660	COG1837	Belongs to the UPF0109 family
OEI98_001661	COG0228	four-way junction DNA binding
OEI98_001662	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OEI98_001663	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
OEI98_001664	COG0552	protein localization to endoplasmic reticulum
OEI98_001665	COG1196	nuclear chromosome segregation
OEI98_001668	COG1196	nuclear chromosome segregation
OEI98_001670	COG2359	stage V sporulation protein S
OEI98_001672	COG0571	ribonuclease III activity
OEI98_001673	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OEI98_001675	COG1028	Short-chain dehydrogenase reductase Sdr
OEI98_001676	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OEI98_001677	COG2070	2-Nitropropane dioxygenase
OEI98_001678	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OEI98_001681	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OEI98_001682	COG1399	metal-binding, possibly nucleic acid-binding protein
OEI98_001683	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
OEI98_001684	COG0280	phosphate acetyltransferase
OEI98_001687	COG3314	Sporulation integral membrane protein YlbJ
OEI98_001694	COG1307	EDD domain protein, DegV family
OEI98_001696	COG1461	Dihydroxyacetone kinase
OEI98_001697	COG1302	Protein conserved in bacteria
OEI98_001701	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OEI98_001702	COG1162	GTPase activity
OEI98_001703	COG0515	serine threonine protein kinase
OEI98_001703	COG2815	serine threonine protein kinase
OEI98_001704	COG0631	protein serine/threonine phosphatase activity
OEI98_001706	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OEI98_001706	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OEI98_001707	COG2738	Putative neutral zinc metallopeptidase
OEI98_001711	COG0242	peptide deformylase activity
OEI98_001712	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OEI98_001715	COG0194	GDP metabolic process
OEI98_001717	COG1561	YicC-like family, N-terminal region
OEI98_001718	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
OEI98_001719	COG2814	Major facilitator Superfamily
OEI98_001723	COG1293	RNA-binding protein homologous to eukaryotic snRNP
OEI98_001727	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
OEI98_001728	COG2011	ABC-type metal ion transport system permease component
OEI98_001730	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
OEI98_001734	COG0037	tRNA processing
OEI98_001742	COG0540	Belongs to the ATCase OTCase family
OEI98_001744	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OEI98_001745	COG0564	pseudouridine synthase activity
OEI98_001748	COG3063	Type IV pilus biogenesis stability protein PilW
OEI98_001753	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OEI98_001759	COG1337	RAMP superfamily
OEI98_001766	COG1970	mechanosensitive ion channel activity
OEI98_001768	COG0778	Nitroreductase
OEI98_001769	COG1595	DNA-templated transcription, initiation
OEI98_001778	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OEI98_001779	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OEI98_001785	COG0512	Glutamine amidotransferase of anthranilate synthase
OEI98_001785	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OEI98_001791	COG3599	regulation of cell shape
OEI98_001792	COG2302	S4 RNA-binding domain
OEI98_001795	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OEI98_001797	COG3033	Beta-eliminating lyase
OEI98_001799	COG4948	Mandelate Racemase Muconate Lactonizing
OEI98_001802	COG2610	gluconate transmembrane transporter activity
OEI98_001803	COG1929	Belongs to the glycerate kinase type-1 family
OEI98_001810	COG1854	S-ribosylhomocysteine lyase activity
OEI98_001812	COG0626	cystathionine gamma-synthase activity
OEI98_001813	COG2226	methyltransferase
OEI98_001814	COG1606	tRNA processing
OEI98_001816	COG0785	Cytochrome C biogenesis protein
OEI98_001823	COG2217	Heavy metal translocating P-type atpase
OEI98_001828	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
OEI98_001830	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OEI98_001832	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OEI98_001833	COG1160	GTP binding
OEI98_001842	COG0704	Plays a role in the regulation of phosphate uptake
OEI98_001844	COG0581	inorganic phosphate transmembrane transporter activity
OEI98_001846	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OEI98_001848	COG0745	RESPONSE REGULATOR receiver
OEI98_001849	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
OEI98_001850	COG1873	PFAM PRC-barrel domain
OEI98_001855	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
OEI98_001856	COG0849	cell division
OEI98_001857	COG3856	small basic protein
OEI98_001860	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
OEI98_001862	COG0772	Belongs to the SEDS family
OEI98_001863	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
OEI98_001865	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OEI98_001866	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OEI98_001867	COG0768	penicillin binding
OEI98_001871	COG0612	Peptidase, M16
OEI98_001872	COG0612	Peptidase, M16
OEI98_001874	COG0012	GTP binding
OEI98_001878	COG0301	tRNA thio-modification
OEI98_001883	COG0508	dehydrogenase complex catalyzes the overall conversion of
OEI98_001884	COG0508	dehydrogenase complex catalyzes the overall conversion of
OEI98_001886	COG3199	ATP-NAD kinase
OEI98_001887	COG0022	dehydrogenase e1 component
OEI98_001888	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OEI98_001889	COG0459	protein refolding
OEI98_001891	COG3344	reverse transcriptase
OEI98_001892	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OEI98_001893	COG0321	lipoyl(octanoyl) transferase activity
OEI98_001894	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OEI98_001897	COG2340	Cysteine-rich secretory protein family
OEI98_001898	COG1362	aminopeptidase activity
OEI98_001899	COG2197	response regulator
OEI98_001904	COG1683	Conserved Protein
OEI98_001905	COG1193	negative regulation of DNA recombination
OEI98_001908	COG0072	phenylalanine-tRNA ligase activity
OEI98_001908	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OEI98_001909	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
OEI98_001910	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OEI98_001911	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
OEI98_001912	COG0291	Belongs to the bacterial ribosomal protein bL35 family
OEI98_001913	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
OEI98_001914	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OEI98_001916	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OEI98_001917	COG4399	Belongs to the UPF0754 family
OEI98_001920	COG0745	RESPONSE REGULATOR receiver
OEI98_001921	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OEI98_001928	COG1278	Cold shock
OEI98_001929	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OEI98_001932	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OEI98_001933	COG1956	GAF domain-containing protein
OEI98_001939	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OEI98_001943	COG1482	cell wall glycoprotein biosynthetic process
OEI98_001946	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OEI98_001947	COG2384	SAM-dependent methyltransferase
OEI98_001950	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OEI98_001952	COG0358	DNA primase activity
OEI98_001953	COG0358	DNA primase activity
OEI98_001954	COG0232	Belongs to the dGTPase family. Type 2 subfamily
OEI98_001955	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OEI98_001956	COG0148	phosphopyruvate hydratase activity
OEI98_001957	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OEI98_001958	COG0149	triose-phosphate isomerase activity
OEI98_001959	COG0126	phosphoglycerate kinase activity
OEI98_001961	COG2390	Transcriptional regulator
OEI98_001962	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
OEI98_001963	COG1254	Belongs to the acylphosphatase family
OEI98_001964	COG0561	phosphatase activity
OEI98_001966	COG2720	vancomycin resistance protein
OEI98_001967	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OEI98_001968	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OEI98_001969	COG1067	ATP-dependent peptidase activity
OEI98_001975	COG0840	transmembrane signaling receptor activity
OEI98_001976	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OEI98_001978	COG3464	Transposase
OEI98_001980	COG1136	(ABC) transporter
OEI98_001985	COG1461	Dihydroxyacetone kinase
OEI98_001986	COG1461	Dihydroxyacetone kinase
OEI98_001987	COG2376	Dihydroxyacetone kinase
OEI98_001989	COG1070	Carbohydrate kinase
OEI98_001995	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OEI98_001997	COG0613	PHP domain protein
OEI98_001998	COG0546	phosphoglycolate phosphatase activity
OEI98_001999	COG0698	ribose 5-phosphate isomerase
OEI98_002000	COG3958	Transketolase
OEI98_002001	COG3959	Transketolase, thiamine diphosphate binding domain
OEI98_002002	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OEI98_002006	COG0564	pseudouridine synthase activity
OEI98_002009	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
OEI98_002011	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OEI98_002013	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
OEI98_002014	COG0463	Glycosyl transferase, family 2
OEI98_002020	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
OEI98_002021	COG2217	Heavy metal translocating P-type atpase
OEI98_002023	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OEI98_002027	COG3409	Peptidoglycan-binding domain 1 protein
OEI98_002027	COG5632	N-Acetylmuramoyl-L-alanine amidase
OEI98_002042	COG0740	serine-type endopeptidase activity
OEI98_002043	COG4695	Portal protein
OEI98_002044	COG1802	Transcriptional regulator
OEI98_002044	COG4626	Terminase
OEI98_002061	COG3617	BRO family, N-terminal domain
OEI98_002069	COG2189	Belongs to the N(4) N(6)-methyltransferase family
OEI98_002070	COG3421	Type III restriction
OEI98_002074	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
OEI98_002077	COG3546	catalase activity
OEI98_002078	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OEI98_002079	COG0646	methionine synthase
OEI98_002079	COG1410	methionine synthase
OEI98_002080	COG0646	methionine synthase
OEI98_002080	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OEI98_002081	COG0058	SHG alpha-glucan phosphorylase activity
OEI98_002082	COG0166	Belongs to the GPI family
OEI98_002084	COG0778	Nitroreductase
OEI98_002085	COG2195	Cleaves the N-terminal amino acid of tripeptides
OEI98_002088	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OEI98_002089	COG5002	protein histidine kinase activity
OEI98_002094	COG1131	(ABC) transporter
OEI98_002095	COG0534	Mate efflux family protein
OEI98_002113	COG0534	Mate efflux family protein
OEI98_002116	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
OEI98_002123	COG4109	DRTGG domain
OEI98_002124	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002128	COG1426	Protein conserved in bacteria
OEI98_002131	COG3833	ABC-type maltose transport systems, permease component
OEI98_002132	COG1175	transmembrane transport
OEI98_002133	COG2182	Extracellular solute-binding protein
OEI98_002138	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OEI98_002140	COG1752	Esterase of the alpha-beta hydrolase superfamily
OEI98_002141	COG1309	transcriptional regulator
OEI98_002142	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OEI98_002146	COG0671	phosphoesterase, PA-phosphatase related
OEI98_002147	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OEI98_002147	COG2199	diguanylate cyclase activity
OEI98_002149	COG2217	Heavy metal translocating P-type atpase
OEI98_002150	COG0482	sulfurtransferase activity
OEI98_002153	COG1733	regulation of RNA biosynthetic process
OEI98_002154	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
OEI98_002156	COG2608	mercury ion transmembrane transporter activity
OEI98_002157	COG0586	Pfam SNARE associated Golgi protein
OEI98_002158	COG1342	Belongs to the UPF0251 family
OEI98_002159	COG3447	MASE1 domain protein
OEI98_002159	COG5001	Diguanylate cyclase
OEI98_002159	COG5002	protein histidine kinase activity
OEI98_002163	COG0735	belongs to the Fur family
OEI98_002166	COG1120	ATPase activity
OEI98_002170	COG0446	pyridine nucleotide-disulphide oxidoreductase
OEI98_002173	COG1234	tRNA 3'-trailer cleavage
OEI98_002175	COG0489	protein tyrosine kinase activity
OEI98_002176	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
OEI98_002182	COG2226	methyltransferase
OEI98_002186	COG1609	Transcriptional regulator
OEI98_002187	COG1609	Transcriptional regulator
OEI98_002188	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OEI98_002192	COG2182	Extracellular solute-binding protein
OEI98_002205	COG0842	Transport permease protein
OEI98_002206	COG1131	(ABC) transporter
OEI98_002208	COG3250	beta-galactosidase activity
OEI98_002210	COG3250	beta-galactosidase activity
OEI98_002212	COG4211	Belongs to the binding-protein-dependent transport system permease family
OEI98_002213	COG4211	Belongs to the binding-protein-dependent transport system permease family
OEI98_002219	COG1940	carbohydrate kinase activity
OEI98_002220	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OEI98_002221	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
OEI98_002222	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
OEI98_002224	COG0800	Aldolase
OEI98_002225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OEI98_002226	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
OEI98_002227	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OEI98_002228	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OEI98_002228	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002229	COG3716	PTS system mannose fructose sorbose family IID component
OEI98_002231	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002231	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OEI98_002233	COG3711	transcriptional antiterminator
OEI98_002237	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OEI98_002241	COG1349	DNA-binding transcription factor activity
OEI98_002242	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OEI98_002246	COG0673	inositol 2-dehydrogenase activity
OEI98_002247	COG0673	inositol 2-dehydrogenase activity
OEI98_002260	COG0318	PFAM AMP-dependent synthetase and ligase
OEI98_002266	COG0768	penicillin binding
OEI98_002270	COG0556	nucleotide-excision repair
OEI98_002271	COG2045	Belongs to the ComB family
OEI98_002272	COG2045	Belongs to the ComB family
OEI98_002273	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OEI98_002274	COG3409	Peptidoglycan-binding domain 1 protein
OEI98_002274	COG0793	Belongs to the peptidase S41A family
OEI98_002275	COG0739	heme binding
OEI98_002276	COG2177	Part of the ABC transporter FtsEX involved in
OEI98_002277	COG2884	Cell division ATP-binding protein ftsE
OEI98_002278	COG3835	regulator
OEI98_002279	COG3842	ATPase activity
OEI98_002282	COG0019	diaminopimelate decarboxylase activity
OEI98_002285	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OEI98_002288	COG0849	cell division
OEI98_002289	COG4166	transmembrane transport
OEI98_002296	COG0443	Heat shock 70 kDa protein
OEI98_002298	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
OEI98_002298	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002298	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OEI98_002300	COG2376	Dihydroxyacetone kinase
OEI98_002303	COG0446	pyridine nucleotide-disulphide oxidoreductase
OEI98_002305	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
OEI98_002306	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OEI98_002307	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OEI98_002314	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
OEI98_002315	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
OEI98_002318	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OEI98_002321	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
OEI98_002322	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OEI98_002325	COG0140	phosphoribosyl-ATP diphosphatase activity
OEI98_002325	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
OEI98_002331	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OEI98_002339	COG3344	reverse transcriptase
OEI98_002343	COG1131	(ABC) transporter
OEI98_002344	COG3459	Glycosyltransferase 36 associated
OEI98_002345	COG3459	Glycosyltransferase 36 associated
OEI98_002346	COG0598	Magnesium transport protein CorA
OEI98_002349	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OEI98_002350	COG2873	o-acetylhomoserine
OEI98_002351	COG0460	homoserine dehydrogenase
OEI98_002353	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
OEI98_002354	COG3464	Transposase
OEI98_002355	COG1773	rubredoxin
OEI98_002358	COG1757	Na H antiporter
OEI98_002359	COG0205	6-phosphofructokinase activity
OEI98_002361	COG3958	Transketolase
OEI98_002362	COG3959	Transketolase, thiamine diphosphate binding domain
OEI98_002363	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OEI98_002368	COG2337	Toxic component of a toxin-antitoxin (TA) module
OEI98_002370	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
OEI98_002372	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OEI98_002372	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
OEI98_002379	COG1971	Probably functions as a manganese efflux pump
OEI98_002380	COG0450	alkyl hydroperoxide reductase
OEI98_002382	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
OEI98_002383	COG1793	dna ligase
OEI98_002384	COG0432	Pfam Uncharacterised protein family UPF0047
OEI98_002386	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OEI98_002388	COG0318	PFAM AMP-dependent synthetase and ligase
OEI98_002388	COG0204	Acyl-transferase
OEI98_002391	COG0280	phosphate acetyltransferase
OEI98_002397	COG3426	butyrate kinase activity
OEI98_002399	COG0280	phosphate acetyltransferase
OEI98_002400	COG3426	butyrate kinase activity
OEI98_002402	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
OEI98_002406	COG1305	Transglutaminase-like
OEI98_002408	COG0714	Associated with various cellular activities
OEI98_002409	COG0546	phosphoglycolate phosphatase activity
OEI98_002411	COG1388	LysM domain
OEI98_002411	COG1705	Flagellar rod assembly protein muramidase FlgJ
OEI98_002419	COG0708	Exodeoxyribonuclease III
OEI98_002420	COG2033	superoxide reductase activity
OEI98_002439	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OEI98_002445	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
OEI98_002448	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
OEI98_002452	COG0201	protein transport
OEI98_002465	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
OEI98_002471	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
OEI98_002473	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
OEI98_002475	COG0049	tRNA binding
OEI98_002476	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
OEI98_002477	COG1358	cellular component organization or biogenesis
OEI98_002478	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OEI98_002479	COG0085	RNA polymerase activity
OEI98_002480	COG3464	Transposase
OEI98_002481	COG0222	ribosome binding
OEI98_002483	COG0081	regulation of translation
OEI98_002485	COG0250	Participates in transcription elongation, termination and antitermination
OEI98_002486	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OEI98_002487	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OEI98_002488	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
OEI98_002490	COG1595	DNA-templated transcription, initiation
OEI98_002491	COG3688	RNA-binding protein containing a PIN domain
OEI98_002492	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OEI98_002495	COG1045	serine acetyltransferase
OEI98_002498	COG0442	prolyl-tRNA aminoacylation
OEI98_002499	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
OEI98_002502	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
OEI98_002503	COG4956	integral membrane protein (PIN domain superfamily)
OEI98_002505	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
OEI98_002506	COG1914	H( )-stimulated, divalent metal cation uptake system
OEI98_002508	COG0542	response to heat
OEI98_002509	COG3869	Catalyzes the specific phosphorylation of arginine residues in
OEI98_002513	COG0281	malic enzyme
OEI98_002514	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OEI98_002515	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OEI98_002516	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002517	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002517	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002517	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002518	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002518	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002518	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002519	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002519	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002519	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002521	COG3711	transcriptional antiterminator
OEI98_002521	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002527	COG4224	UPF0291 protein
OEI98_002529	COG1506	peptidase
OEI98_002529	COG0823	Involved in the tonB-independent uptake of proteins
OEI98_002529	COG4946	Tricorn protease homolog
OEI98_002531	COG0720	synthase
OEI98_002533	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OEI98_002537	COG5322	oxidoreductase activity
OEI98_002537	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OEI98_002541	COG0697	spore germination
OEI98_002544	COG4684	Psort location CytoplasmicMembrane, score
OEI98_002545	COG4770	biotin carboxylase activity
OEI98_002546	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OEI98_002547	COG0346	lactoylglutathione lyase activity
OEI98_002549	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
OEI98_002549	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
OEI98_002551	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
OEI98_002551	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
OEI98_002554	COG3852	Histidine kinase
OEI98_002556	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
OEI98_002559	COG2208	phosphoserine phosphatase activity
OEI98_002561	COG2226	methyltransferase
OEI98_002562	COG0697	spore germination
OEI98_002563	COG1595	DNA-templated transcription, initiation
OEI98_002565	COG1131	(ABC) transporter
OEI98_002570	COG1063	alcohol dehydrogenase
OEI98_002571	COG0156	8-amino-7-oxononanoate synthase activity
OEI98_002577	COG2267	carboxylic ester hydrolase activity
OEI98_002578	COG2151	metal-sulfur cluster biosynthetic enzyme
OEI98_002581	COG2204	response regulator
OEI98_002583	COG0022	dehydrogenase e1 component
OEI98_002585	COG0508	dehydrogenase complex catalyzes the overall conversion of
OEI98_002588	COG3706	GGDEF domain
OEI98_002591	COG5001	Diguanylate cyclase
OEI98_002591	COG3300	MHYT domain
OEI98_002606	COG3387	PFAM Glycoside hydrolase 15-related
OEI98_002608	COG0395	ABC-type sugar transport system, permease component
OEI98_002609	COG1175	transmembrane transport
OEI98_002610	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
OEI98_002612	COG1940	carbohydrate kinase activity
OEI98_002621	COG0739	heme binding
OEI98_002641	COG2199	diguanylate cyclase activity
OEI98_002641	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OEI98_002650	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
OEI98_002661	COG3620	sequence-specific DNA binding
OEI98_002662	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OEI98_002664	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
OEI98_002668	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
OEI98_002668	COG0248	Ppx GppA phosphatase
OEI98_002669	COG1098	S1 RNA binding domain
OEI98_002677	COG2385	sporulation resulting in formation of a cellular spore
OEI98_002678	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OEI98_002679	COG3344	reverse transcriptase
OEI98_002680	COG0776	regulation of translation
OEI98_002681	COG3956	TIGRFAM MazG family protein
OEI98_002683	COG2814	Major facilitator Superfamily
OEI98_002685	COG5002	protein histidine kinase activity
OEI98_002686	COG0745	RESPONSE REGULATOR receiver
OEI98_002687	COG2033	superoxide reductase activity
OEI98_002689	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
OEI98_002695	COG0037	tRNA processing
OEI98_002704	COG0142	geranyltranstransferase activity
OEI98_002708	COG1252	NADH dehydrogenase
OEI98_002709	COG1528	Iron-storage protein
OEI98_002711	COG0454	-acetyltransferase
OEI98_002716	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OEI98_002721	COG1595	DNA-templated transcription, initiation
OEI98_002725	COG1725	Transcriptional regulator
OEI98_002730	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
OEI98_002733	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
OEI98_002735	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
OEI98_002738	COG0493	'glutamate synthase
OEI98_002738	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
OEI98_002741	COG1131	(ABC) transporter
OEI98_002745	COG1595	DNA-templated transcription, initiation
OEI98_002748	COG1598	PFAM Uncharacterised protein family UPF0150
OEI98_002753	COG0671	phosphoesterase, PA-phosphatase related
OEI98_002754	COG3859	Proton-coupled thiamine transporter YuaJ
OEI98_002755	COG1132	(ABC) transporter
OEI98_002757	COG1846	Transcriptional regulator
OEI98_002758	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OEI98_002758	COG1796	DNA polymerase
OEI98_002761	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
OEI98_002764	COG0667	Aldo Keto reductase
OEI98_002765	COG1725	Transcriptional regulator
OEI98_002766	COG1131	(ABC) transporter
OEI98_002769	COG0747	negative chemotaxis
OEI98_002770	COG0601	transmembrane transport
OEI98_002771	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OEI98_002772	COG0444	Belongs to the ABC transporter superfamily
OEI98_002773	COG4608	Belongs to the ABC transporter superfamily
OEI98_002779	COG1131	(ABC) transporter
OEI98_002781	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OEI98_002782	COG0018	arginyl-trna synthetase
OEI98_002786	COG2959	enzyme of heme biosynthesis
OEI98_002790	COG0531	amino acid
OEI98_002791	COG0697	spore germination
OEI98_002794	COG1802	Transcriptional regulator
OEI98_002796	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
OEI98_002797	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
OEI98_002799	COG4466	Protein conserved in bacteria
OEI98_002803	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OEI98_002804	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OEI98_002805	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OEI98_002808	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OEI98_002809	COG3850	Histidine kinase
OEI98_002809	COG5002	protein histidine kinase activity
OEI98_002811	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
OEI98_002812	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
OEI98_002813	COG2088	sporulation resulting in formation of a cellular spore
OEI98_002814	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OEI98_002816	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
OEI98_002818	COG1609	Transcriptional regulator
OEI98_002820	COG0071	Belongs to the small heat shock protein (HSP20) family
OEI98_002823	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002823	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OEI98_002823	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OEI98_002825	COG1349	DNA-binding transcription factor activity
OEI98_002826	COG3464	Transposase
OEI98_002827	COG2373	Large extracellular alpha-helical protein
OEI98_002832	COG1361	Conserved repeat domain
OEI98_002832	COG3266	domain, Protein
OEI98_002832	COG2911	Protein conserved in bacteria
OEI98_002833	COG0515	serine threonine protein kinase
OEI98_002833	COG4991	sh3 domain protein
OEI98_002833	COG3064	Membrane
OEI98_002836	COG0504	CTP synthase activity
OEI98_002840	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OEI98_002851	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
OEI98_002852	COG0460	homoserine dehydrogenase
OEI98_002854	COG0531	amino acid
OEI98_002855	COG3344	reverse transcriptase
OEI98_002856	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OEI98_002858	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
OEI98_002859	COG1518	maintenance of DNA repeat elements
OEI98_002874	COG3263	regulation of cellular component size
OEI98_002882	COG0822	iron-sulfur transferase activity
OEI98_002883	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OEI98_002885	COG0719	Fe-S assembly protein
OEI98_002886	COG0396	ATPase activity
OEI98_002887	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
OEI98_002892	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OEI98_002896	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OEI98_002897	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
OEI98_002901	COG5002	protein histidine kinase activity
OEI98_002906	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
OEI98_002907	COG0308	aminopeptidase N
OEI98_002910	COG2333	competence protein COMEC
OEI98_002910	COG0658	competence protein
OEI98_002913	COG0672	)-iron permease
OEI98_002918	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
OEI98_002919	COG0840	transmembrane signaling receptor activity
OEI98_002921	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OEI98_002922	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OEI98_002923	COG0446	pyridine nucleotide-disulphide oxidoreductase
OEI98_002925	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OEI98_002926	COG1164	Oligoendopeptidase f
OEI98_002927	COG2226	methyltransferase
OEI98_002929	COG1132	(ABC) transporter
OEI98_002932	COG1132	(ABC) transporter
OEI98_002934	COG1132	(ABC) transporter
OEI98_002935	COG1132	(ABC) transporter
OEI98_002936	COG1132	(ABC) transporter
OEI98_002938	COG1132	(ABC) transporter
OEI98_002947	COG0641	radical SAM
OEI98_002952	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
OEI98_002958	COG0629	single-stranded DNA binding
OEI98_002961	COG0668	transmembrane transport
OEI98_002964	COG4242	Belongs to the peptidase S51 family
OEI98_002966	COG1597	lipid kinase activity
OEI98_002968	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OEI98_002969	COG1475	DNA binding
OEI98_002970	COG1192	Involved in chromosome partitioning
OEI98_002971	COG1475	DNA binding
OEI98_002976	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OEI98_002977	COG1847	R3H domain protein