Thert_00005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00006 SM00052 Putative diguanylate phosphodiesterase Thert_00006 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thert_00006 SM00091 PAS domain Thert_00006 SM00267 diguanylate cyclase Thert_00007 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00025 SM00363 S4 RNA-binding domain Thert_00031 SM01230 Thert_00031 Thert_00033 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_00033 SM00357 Cold shock protein domain Thert_00033 SM00955 Thert_00033 Thert_00043 SM00165 Ubiquitin associated domain Thert_00045 SM01133 Thert_00045 Thert_00048 SM00014 Acid phosphatase homologues Thert_00050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00058 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_00061 SM00271 DnaJ molecular chaperone homology domain Thert_00066 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_00067 SM00838 Elongation factor G C-terminus Thert_00072 SM00646 Thert_00072 Thert_00079 SM00849 Metallo-beta-lactamase superfamily Thert_00080 SM00849 Metallo-beta-lactamase superfamily Thert_00083 SM00347 helix_turn_helix multiple antibiotic resistance protein Thert_00084 SM00382 ATPases associated with a variety of cellular activities Thert_00088 SM00831 Cation transporter/ATPase, N-terminus Thert_00091 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thert_00107 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thert_00109 SM00936 Penicillin-binding protein 5, C-terminal domain Thert_00113 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00120 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_00122 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_00125 SM00851 MGS-like domain Thert_00137 SM00902 Iron hydrogenase small subunit Thert_00137 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Thert_00138 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Thert_00140 SM00387 Histidine kinase-like ATPases Thert_00142 SM00481 DNA polymerase alpha chain like domain Thert_00150 SM00838 Elongation factor G C-terminus Thert_00151 SM00287 Bacterial SH3 domain homologues Thert_00159 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Thert_00159 SM00475 5'-3' exonuclease Thert_00159 SM00482 DNA polymerase A domain Thert_00172 SM00636 Thert_00172 Thert_00177 SM00100 Cyclic nucleotide-monophosphate binding domain Thert_00177 SM00419 helix_turn_helix, cAMP Regulatory protein Thert_00187 SM00421 helix_turn_helix, Lux Regulon Thert_00187 SM00448 cheY-homologous receiver domain Thert_00188 SM00387 Histidine kinase-like ATPases Thert_00190 SM00463 Small MutS-related domain Thert_00190 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Thert_00190 SM00534 ATPase domain of DNA mismatch repair MUTS family Thert_00195 SM00873 B3/4 domain Thert_00195 SM00874 tRNA synthetase B5 domain Thert_00195 SM00896 Ferredoxin-fold anticodon binding domain Thert_00197 SM00967 RNA 2'-O ribose methyltransferase substrate binding Thert_00204 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thert_00208 SM00267 diguanylate cyclase Thert_00208 SM00448 cheY-homologous receiver domain Thert_00213 SM00938 Nitrogen regulatory protein P-II Thert_00225 SM00938 Nitrogen regulatory protein P-II Thert_00226 SM00938 Nitrogen regulatory protein P-II Thert_00236 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_00250 SM00382 ATPases associated with a variety of cellular activities Thert_00254 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_00254 SM00387 Histidine kinase-like ATPases Thert_00254 SM00388 His Kinase A (phosphoacceptor) domain Thert_00255 SM00448 cheY-homologous receiver domain Thert_00255 SM00862 Transcriptional regulatory protein, C terminal Thert_00258 SM00382 ATPases associated with a variety of cellular activities Thert_00261 SM00448 cheY-homologous receiver domain Thert_00261 SM00850 LytTr DNA-binding domain Thert_00262 SM00387 Histidine kinase-like ATPases Thert_00282 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thert_00301 SM00829 Enoylreductase Thert_00306 SM00382 ATPases associated with a variety of cellular activities Thert_00314 SM00354 helix_turn _helix lactose operon repressor Thert_00318 SM00642 Alpha-amylase domain Thert_00329 SM00354 helix_turn _helix lactose operon repressor Thert_00333 SM00354 helix_turn _helix lactose operon repressor Thert_00343 SM00831 Cation transporter/ATPase, N-terminus Thert_00356 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_00358 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_00358 SM00387 Histidine kinase-like ATPases Thert_00358 SM00388 His Kinase A (phosphoacceptor) domain Thert_00359 SM00448 cheY-homologous receiver domain Thert_00359 SM00862 Transcriptional regulatory protein, C terminal Thert_00365 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_00365 SM00876 Biotin and Thiamin Synthesis associated domain Thert_00370 SM00387 Histidine kinase-like ATPases Thert_00385 SM00382 ATPases associated with a variety of cellular activities Thert_00401 SM00382 ATPases associated with a variety of cellular activities Thert_00402 SM00357 Cold shock protein domain Thert_00412 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thert_00414 SM00636 Thert_00414 Thert_00415 SM00849 Metallo-beta-lactamase superfamily Thert_00425 SM00400 zinc finger Thert_00425 SM00493 Thert_00425 Thert_00426 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00429 SM01192 Thert_00429 Thert_00429 SM01193 Thert_00429 Thert_00434 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Thert_00442 SM01208 Thert_00442 Thert_00443 SM00478 endonuclease III Thert_00443 SM00525 Thert_00443 Thert_00450 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_00489 SM00917 LeuA allosteric (dimerisation) domain Thert_00504 SM00507 HNH nucleases Thert_00506 SM00028 Tetratricopeptide repeats Thert_00511 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thert_00518 SM00563 Phosphate acyltransferases Thert_00524 SM00646 Thert_00524 Thert_00527 SM00382 ATPases associated with a variety of cellular activities Thert_00528 SM00382 ATPases associated with a variety of cellular activities Thert_00535 SM00845 GatB domain Thert_00539 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thert_00539 SM00292 breast cancer carboxy-terminal domain Thert_00539 SM00532 Ligase N family Thert_00550 SM00382 ATPases associated with a variety of cellular activities Thert_00550 SM00930 Thert_00550 Thert_00560 SM01209 Thert_00560 Thert_00560 SM01210 Thert_00560 Thert_00562 SM00798 AICARFT/IMPCHase bienzyme Thert_00562 SM00851 MGS-like domain Thert_00568 SM01001 AIR carboxylase Thert_00596 SM00530 Helix-turn-helix XRE-family like proteins Thert_00603 SM00116 Domain in cystathionine beta-synthase and other proteins. Thert_00603 SM01240 Thert_00603 Thert_00606 SM00883 Chaperonin 10 Kd subunit Thert_00616 SM00382 ATPases associated with a variety of cellular activities Thert_00623 SM00382 ATPases associated with a variety of cellular activities Thert_00627 SM00382 ATPases associated with a variety of cellular activities Thert_00629 SM00028 Tetratricopeptide repeats Thert_00629 SM00530 Helix-turn-helix XRE-family like proteins Thert_00630 SM00382 ATPases associated with a variety of cellular activities Thert_00635 SM00478 endonuclease III Thert_00638 SM00387 Histidine kinase-like ATPases Thert_00639 SM00448 cheY-homologous receiver domain Thert_00639 SM00850 LytTr DNA-binding domain Thert_00641 SM00881 CoA binding domain Thert_00645 SM00382 ATPases associated with a variety of cellular activities Thert_00657 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_00657 SM00732 Likely ribonuclease with RNase H fold. Thert_00658 SM00937 Thert_00658 Thert_00660 SM00957 SecA DEAD-like domain Thert_00660 SM00958 SecA preprotein cross-linking domain Thert_00665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00668 SM00382 ATPases associated with a variety of cellular activities Thert_00670 SM00062 Bacterial periplasmic substrate-binding proteins Thert_00670 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Thert_00683 SM00858 Thert_00683 Thert_00706 SM00382 ATPases associated with a variety of cellular activities Thert_00708 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_00716 SM00909 Sporulation and spore germination Thert_00717 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_00717 SM00387 Histidine kinase-like ATPases Thert_00717 SM00388 His Kinase A (phosphoacceptor) domain Thert_00718 SM00448 cheY-homologous receiver domain Thert_00718 SM00862 Transcriptional regulatory protein, C terminal Thert_00720 SM00354 helix_turn _helix lactose operon repressor Thert_00737 SM00854 Bacterial capsule synthesis protein PGA_cap Thert_00746 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thert_00748 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Thert_00751 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_00751 SM00866 Thert_00751 Thert_00755 SM00382 ATPases associated with a variety of cellular activities Thert_00758 SM01221 Thert_00758 Thert_00758 SM01222 Thert_00758 Thert_00761 SM00890 Domain of unknown function Thert_00762 SM01329 Thert_00762 Thert_00773 SM00271 DnaJ molecular chaperone homology domain Thert_00788 SM00382 ATPases associated with a variety of cellular activities Thert_00804 SM00382 ATPases associated with a variety of cellular activities Thert_00809 SM00421 helix_turn_helix, Lux Regulon Thert_00813 SM00981 Thert_00813 Thert_00818 SM00344 helix_turn_helix ASNC type Thert_00823 SM00899 Thert_00823 Thert_00825 SM00014 Acid phosphatase homologues Thert_00828 SM00382 ATPases associated with a variety of cellular activities Thert_00834 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Thert_00841 SM00354 helix_turn _helix lactose operon repressor Thert_00848 SM00287 Bacterial SH3 domain homologues Thert_00877 SM00382 ATPases associated with a variety of cellular activities Thert_00899 SM00382 ATPases associated with a variety of cellular activities Thert_00903 SM00342 helix_turn_helix, arabinose operon control protein Thert_00903 SM00448 cheY-homologous receiver domain Thert_00905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_00912 SM00382 ATPases associated with a variety of cellular activities Thert_00918 SM00354 helix_turn _helix lactose operon repressor Thert_00922 SM01350 Thert_00922 Thert_00926 SM00420 helix_turn_helix, Deoxyribose operon repressor Thert_00926 SM01134 Thert_00926 Thert_00929 SM00858 Thert_00929 Thert_00932 SM00710 Parallel beta-helix repeats Thert_00937 SM00354 helix_turn _helix lactose operon repressor Thert_00939 SM00257 Lysin motif Thert_00959 SM00244 prohibitin homologues Thert_00964 SM00849 Metallo-beta-lactamase superfamily Thert_00979 SM00861 Transketolase, pyrimidine binding domain Thert_00984 SM00354 helix_turn _helix lactose operon repressor Thert_00999 SM00382 ATPases associated with a variety of cellular activities Thert_01006 SM00849 Metallo-beta-lactamase superfamily Thert_01006 SM01027 Beta-Casp domain Thert_01017 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thert_01025 SM00382 ATPases associated with a variety of cellular activities Thert_01033 SM00382 ATPases associated with a variety of cellular activities Thert_01039 SM00861 Transketolase, pyrimidine binding domain Thert_01047 SM00354 helix_turn _helix lactose operon repressor Thert_01048 SM00849 Metallo-beta-lactamase superfamily Thert_01048 SM01027 Beta-Casp domain Thert_01050 SM01217 Thert_01050 Thert_01066 SM00028 Tetratricopeptide repeats Thert_01067 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thert_01067 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01073 SM00382 ATPases associated with a variety of cellular activities Thert_01074 SM00382 ATPases associated with a variety of cellular activities Thert_01086 SM00060 Fibronectin type 3 domain Thert_01086 SM00429 ig-like, plexins, transcription factors Thert_01113 SM00226 Low molecular weight phosphatase family Thert_01116 SM00937 Thert_01116 Thert_01122 SM00357 Cold shock protein domain Thert_01122 SM00382 ATPases associated with a variety of cellular activities Thert_01122 SM00959 Rho termination factor, N-terminal domain Thert_01127 SM00448 cheY-homologous receiver domain Thert_01128 SM00646 Thert_01128 Thert_01131 SM01321 Thert_01131 Thert_01133 SM00382 ATPases associated with a variety of cellular activities Thert_01134 SM00382 ATPases associated with a variety of cellular activities Thert_01141 SM00420 helix_turn_helix, Deoxyribose operon repressor Thert_01141 SM01134 Thert_01141 Thert_01156 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01156 SM00387 Histidine kinase-like ATPases Thert_01156 SM00388 His Kinase A (phosphoacceptor) domain Thert_01157 SM00448 cheY-homologous receiver domain Thert_01157 SM00862 Transcriptional regulatory protein, C terminal Thert_01179 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_01179 SM00245 tail specific protease Thert_01187 SM00849 Metallo-beta-lactamase superfamily Thert_01191 SM00382 ATPases associated with a variety of cellular activities Thert_01192 SM00382 ATPases associated with a variety of cellular activities Thert_01193 SM00347 helix_turn_helix multiple antibiotic resistance protein Thert_01196 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_01197 SM00116 Domain in cystathionine beta-synthase and other proteins. Thert_01197 SM00382 ATPases associated with a variety of cellular activities Thert_01207 SM00487 DEAD-like helicases superfamily Thert_01231 SM00382 ATPases associated with a variety of cellular activities Thert_01232 SM00883 Chaperonin 10 Kd subunit Thert_01249 SM00421 helix_turn_helix, Lux Regulon Thert_01251 SM00382 ATPases associated with a variety of cellular activities Thert_01264 SM00530 Helix-turn-helix XRE-family like proteins Thert_01265 SM00267 diguanylate cyclase Thert_01268 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_01273 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01273 SM00387 Histidine kinase-like ATPases Thert_01273 SM00388 His Kinase A (phosphoacceptor) domain Thert_01274 SM00448 cheY-homologous receiver domain Thert_01274 SM00862 Transcriptional regulatory protein, C terminal Thert_01277 SM00257 Lysin motif Thert_01277 SM01208 Thert_01277 Thert_01279 SM00382 ATPases associated with a variety of cellular activities Thert_01292 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thert_01292 SM00091 PAS domain Thert_01292 SM00267 diguanylate cyclase Thert_01306 SM00400 zinc finger Thert_01317 SM00382 ATPases associated with a variety of cellular activities Thert_01320 SM00028 Tetratricopeptide repeats Thert_01323 SM00487 DEAD-like helicases superfamily Thert_01328 SM00788 Adenylosuccinate synthetase Thert_01334 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thert_01334 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01337 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01337 SM00387 Histidine kinase-like ATPases Thert_01337 SM00388 His Kinase A (phosphoacceptor) domain Thert_01338 SM00448 cheY-homologous receiver domain Thert_01338 SM00862 Transcriptional regulatory protein, C terminal Thert_01341 SM00116 Domain in cystathionine beta-synthase and other proteins. Thert_01341 SM00924 MgtE intracellular N domain Thert_01342 SM00100 Cyclic nucleotide-monophosphate binding domain Thert_01342 SM00419 helix_turn_helix, cAMP Regulatory protein Thert_01343 SM00382 ATPases associated with a variety of cellular activities Thert_01361 SM00046 Diacylglycerol kinase catalytic domain (presumed) Thert_01365 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_01365 SM00876 Biotin and Thiamin Synthesis associated domain Thert_01366 SM00470 ParB-like nuclease domain Thert_01368 SM00470 ParB-like nuclease domain Thert_01371 SM01228 Thert_01371 Thert_01375 SM00393 Putative single-stranded nucleic acids-binding domain Thert_01375 SM01245 Thert_01375 Thert_01377 SM01234 Thert_01377 Thert_01379 SM00382 ATPases associated with a variety of cellular activities Thert_01379 SM00760 Bacterial dnaA protein helix-turn-helix domain Thert_01380 SM00480 DNA polymerase III beta subunit Thert_01381 SM00363 S4 RNA-binding domain Thert_01387 SM00387 Histidine kinase-like ATPases Thert_01387 SM00433 TopoisomeraseII Thert_01388 SM00434 DNA Topoisomerase IV Thert_01389 SM00900 Thert_01389 Thert_01396 SM01329 Thert_01396 Thert_01416 SM00421 helix_turn_helix, Lux Regulon Thert_01432 SM00400 zinc finger Thert_01439 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thert_01439 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thert_01439 SM00091 PAS domain Thert_01439 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01439 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_01440 SM00382 ATPases associated with a variety of cellular activities Thert_01442 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thert_01442 SM00493 Thert_01442 Thert_01447 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_01461 SM00363 S4 RNA-binding domain Thert_01465 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_01466 SM00849 Metallo-beta-lactamase superfamily Thert_01469 SM00986 Uracil DNA glycosylase superfamily Thert_01469 SM00987 UreE urease accessory protein, C-terminal domain Thert_01494 SM00966 SpoVT / AbrB like domain Thert_01511 SM00028 Tetratricopeptide repeats Thert_01511 SM00530 Helix-turn-helix XRE-family like proteins Thert_01519 SM01208 Thert_01519 Thert_01520 SM00650 Ribosomal RNA adenine dimethylases Thert_01529 SM00382 ATPases associated with a variety of cellular activities Thert_01548 SM00487 DEAD-like helicases superfamily Thert_01548 SM00490 helicase superfamily c-terminal domain Thert_01552 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_01553 SM00382 ATPases associated with a variety of cellular activities Thert_01556 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_01587 SM00354 helix_turn _helix lactose operon repressor Thert_01592 SM01400 Thert_01592 Thert_01593 SM00448 cheY-homologous receiver domain Thert_01593 SM00862 Transcriptional regulatory protein, C terminal Thert_01594 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_01594 SM00387 Histidine kinase-like ATPases Thert_01594 SM00388 His Kinase A (phosphoacceptor) domain Thert_01595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_01598 SM00487 DEAD-like helicases superfamily Thert_01598 SM00490 helicase superfamily c-terminal domain Thert_01598 SM00982 Thert_01598 Thert_01598 SM01058 CarD-like/TRCF domain Thert_01602 SM00966 SpoVT / AbrB like domain Thert_01606 SM00257 Lysin motif Thert_01609 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_01609 SM00895 Thert_01609 Thert_01626 SM00836 DALR anticodon binding domain Thert_01626 SM01016 Arginyl tRNA synthetase N terminal dom Thert_01639 SM00014 Acid phosphatase homologues Thert_01648 SM00487 DEAD-like helicases superfamily Thert_01648 SM00490 helicase superfamily c-terminal domain Thert_01656 SM00859 Semialdehyde dehydrogenase, NAD binding domain Thert_01660 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Thert_01662 SM00851 MGS-like domain Thert_01662 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Thert_01666 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thert_01669 SM00450 Rhodanese Homology Domain Thert_01671 SM00529 Helix-turn-helix diphteria tox regulatory element Thert_01679 SM00028 Tetratricopeptide repeats Thert_01679 SM00530 Helix-turn-helix XRE-family like proteins Thert_01683 SM00411 bacterial (prokaryotic) histone like domain Thert_01684 SM00363 S4 RNA-binding domain Thert_01689 SM00116 Domain in cystathionine beta-synthase and other proteins. Thert_01689 SM01131 Thert_01689 Thert_01693 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_01696 SM00857 Resolvase, N terminal domain Thert_01705 SM00530 Helix-turn-helix XRE-family like proteins Thert_01716 SM00382 ATPases associated with a variety of cellular activities Thert_01725 SM00420 helix_turn_helix, Deoxyribose operon repressor Thert_01725 SM01134 Thert_01725 Thert_01736 SM00861 Transketolase, pyrimidine binding domain Thert_01750 SM00382 ATPases associated with a variety of cellular activities Thert_01776 SM00646 Thert_01776 Thert_01782 SM00382 ATPases associated with a variety of cellular activities Thert_01786 SM00890 Domain of unknown function Thert_01795 SM00382 ATPases associated with a variety of cellular activities Thert_01809 SM00331 Sigma factor PP2C-like phosphatases Thert_01811 SM00220 Serine/Threonine protein kinases, catalytic domain Thert_01812 SM00977 TilS substrate C-terminal domain Thert_01814 SM00382 ATPases associated with a variety of cellular activities Thert_01816 SM00342 helix_turn_helix, arabinose operon control protein Thert_01818 SM00091 PAS domain Thert_01818 SM00387 Histidine kinase-like ATPases Thert_01818 SM00388 His Kinase A (phosphoacceptor) domain Thert_01848 SM00305 Hint (Hedgehog/Intein) domain C-terminal region Thert_01848 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Thert_01850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thert_01850 SM00267 diguanylate cyclase Thert_01858 SM00838 Elongation factor G C-terminus Thert_01858 SM00889 Elongation factor G, domain IV Thert_01860 SM00919 Malic enzyme, NAD binding domain Thert_01860 SM01274 Thert_01860 Thert_01867 SM00382 ATPases associated with a variety of cellular activities Thert_01867 SM01086 C-terminal, D2-small domain, of ClpB protein Thert_01868 SM00382 ATPases associated with a variety of cellular activities Thert_01870 SM00670 Large family of predicted nucleotide-binding domains Thert_01878 SM00840 Thert_01878 Thert_01880 SM00967 RNA 2'-O ribose methyltransferase substrate binding Thert_01886 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Thert_01886 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thert_01887 SM00649 Ribosomal protein L11/L12 Thert_01898 SM00663 RNA polymerase I subunit A N-terminus Thert_01903 SM00838 Elongation factor G C-terminus Thert_01903 SM00889 Elongation factor G, domain IV Thert_01906 SM01403 Thert_01906 Thert_01910 SM01382 Thert_01910 Thert_01910 SM01383 Thert_01910 Thert_01913 SM00322 K homology RNA-binding domain Thert_01917 SM01374 Thert_01917 Thert_01918 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thert_01932 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_01936 SM00363 S4 RNA-binding domain Thert_01936 SM01390 Thert_01936 Thert_01937 SM00662 RNA polymerases D Thert_01939 SM00382 ATPases associated with a variety of cellular activities Thert_01940 SM00382 ATPases associated with a variety of cellular activities Thert_01949 SM00382 ATPases associated with a variety of cellular activities Thert_01951 SM00861 Transketolase, pyrimidine binding domain Thert_01953 SM00481 DNA polymerase alpha chain like domain Thert_01956 SM01130 Thert_01956 Thert_01963 SM00342 helix_turn_helix, arabinose operon control protein Thert_01963 SM00448 cheY-homologous receiver domain Thert_01964 SM00387 Histidine kinase-like ATPases Thert_01966 SM00877 Thert_01966 Thert_01967 SM00877 Thert_01967 Thert_01977 SM00877 Thert_01977 Thert_01978 SM00877 Thert_01978 Thert_02002 SM00400 zinc finger Thert_02020 SM00382 ATPases associated with a variety of cellular activities Thert_02029 SM00257 Lysin motif Thert_02031 SM00646 Thert_02031 Thert_02032 SM00382 ATPases associated with a variety of cellular activities Thert_02035 SM00460 Transglutaminase/protease-like homologues Thert_02046 SM00563 Phosphate acyltransferases Thert_02072 SM00382 ATPases associated with a variety of cellular activities Thert_02083 SM00487 DEAD-like helicases superfamily Thert_02083 SM00490 helicase superfamily c-terminal domain Thert_02100 SM00487 DEAD-like helicases superfamily Thert_02100 SM00490 helicase superfamily c-terminal domain Thert_02121 SM00028 Tetratricopeptide repeats Thert_02121 SM00220 Serine/Threonine protein kinases, catalytic domain Thert_02126 SM00530 Helix-turn-helix XRE-family like proteins Thert_02135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thert_02150 SM00257 Lysin motif Thert_02157 SM00382 ATPases associated with a variety of cellular activities Thert_02163 SM01005 Alanine racemase, C-terminal domain Thert_02183 SM01068 Putative carbohydrate binding domain Thert_02184 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_02188 SM00244 prohibitin homologues Thert_02212 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thert_02216 SM01207 Thert_02216 Thert_02217 SM00226 Low molecular weight phosphatase family Thert_02226 SM00091 PAS domain Thert_02226 SM00382 ATPases associated with a variety of cellular activities Thert_02228 SM01120 Thert_02228 Thert_02230 SM00849 Metallo-beta-lactamase superfamily Thert_02236 SM00382 ATPases associated with a variety of cellular activities Thert_02239 SM00842 Cell division protein FtsA Thert_02244 SM00382 ATPases associated with a variety of cellular activities Thert_02250 SM00382 ATPases associated with a variety of cellular activities Thert_02258 SM00382 ATPases associated with a variety of cellular activities Thert_02262 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_02262 SM00245 tail specific protease Thert_02263 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_02265 SM00487 DEAD-like helicases superfamily Thert_02265 SM00490 helicase superfamily c-terminal domain Thert_02267 SM00382 ATPases associated with a variety of cellular activities Thert_02268 SM00240 Forkhead associated domain Thert_02271 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thert_02271 SM00465 GIY-YIG type nucleases (URI domain) Thert_02273 SM01061 CAT RNA binding domain Thert_02277 SM00481 DNA polymerase alpha chain like domain Thert_02280 SM00354 helix_turn _helix lactose operon repressor Thert_02289 SM00382 ATPases associated with a variety of cellular activities Thert_02297 SM00354 helix_turn _helix lactose operon repressor Thert_02303 SM00812 Alpha-L-fucosidase Thert_02307 SM00813 Alpha-L-arabinofuranosidase C-terminus Thert_02314 SM00812 Alpha-L-fucosidase Thert_02318 SM01007 Class II Aldolase and Adducin N-terminal domain Thert_02320 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_02326 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thert_02332 SM00419 helix_turn_helix, cAMP Regulatory protein Thert_02333 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_02334 SM00448 cheY-homologous receiver domain Thert_02345 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Thert_02366 SM01192 Thert_02366 Thert_02366 SM01193 Thert_02366 Thert_02377 SM00354 helix_turn _helix lactose operon repressor Thert_02389 SM00640 Glycosyl hydrolases family 32 Thert_02391 SM00640 Glycosyl hydrolases family 32 Thert_02404 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thert_02404 SM00481 DNA polymerase alpha chain like domain Thert_02404 SM00483 DNA polymerase X family Thert_02407 SM00746 metallochaperone-like domain Thert_02421 SM00746 metallochaperone-like domain Thert_02426 SM00387 Histidine kinase-like ATPases Thert_02426 SM00388 His Kinase A (phosphoacceptor) domain Thert_02427 SM00382 ATPases associated with a variety of cellular activities Thert_02427 SM00448 cheY-homologous receiver domain Thert_02435 SM00481 DNA polymerase alpha chain like domain Thert_02452 SM00642 Alpha-amylase domain Thert_02456 SM00116 Domain in cystathionine beta-synthase and other proteins. Thert_02458 SM00481 DNA polymerase alpha chain like domain Thert_02473 SM00382 ATPases associated with a variety of cellular activities Thert_02487 SM00448 cheY-homologous receiver domain Thert_02487 SM00862 Transcriptional regulatory protein, C terminal Thert_02493 SM00857 Resolvase, N terminal domain Thert_02497 SM00470 ParB-like nuclease domain Thert_02499 SM00470 ParB-like nuclease domain Thert_02534 SM00382 ATPases associated with a variety of cellular activities Thert_02535 SM00347 helix_turn_helix multiple antibiotic resistance protein Thert_02545 SM00257 Lysin motif Thert_02545 SM00644 Thert_02545 Thert_02547 SM00857 Resolvase, N terminal domain Thert_02551 SM00857 Resolvase, N terminal domain Thert_02566 SM00938 Nitrogen regulatory protein P-II Thert_02568 SM00448 cheY-homologous receiver domain Thert_02568 SM00862 Transcriptional regulatory protein, C terminal Thert_02569 SM00387 Histidine kinase-like ATPases Thert_02569 SM00388 His Kinase A (phosphoacceptor) domain Thert_02585 SM00966 SpoVT / AbrB like domain Thert_02586 SM00670 Large family of predicted nucleotide-binding domains Thert_02588 SM00488 Thert_02588 Thert_02588 SM00491 Thert_02588 Thert_02592 SM00363 S4 RNA-binding domain Thert_02592 SM01390 Thert_02592 Thert_02599 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thert_02599 SM00387 Histidine kinase-like ATPases Thert_02600 SM00448 cheY-homologous receiver domain Thert_02600 SM00850 LytTr DNA-binding domain Thert_02607 SM00900 Thert_02607 Thert_02617 SM01018 B12 binding domain Thert_02625 SM00448 cheY-homologous receiver domain Thert_02626 SM00387 Histidine kinase-like ATPases Thert_02650 SM00422 helix_turn_helix, mercury resistance Thert_02654 SM00518 AP endonuclease family 2 Thert_02658 SM00382 ATPases associated with a variety of cellular activities Thert_02658 SM00994 ClpX C4-type zinc finger Thert_02658 SM01086 C-terminal, D2-small domain, of ClpB protein Thert_02662 SM00382 ATPases associated with a variety of cellular activities Thert_02662 SM00464 Found in ATP-dependent protease La (LON) Thert_02672 SM00382 ATPases associated with a variety of cellular activities Thert_02681 SM00382 ATPases associated with a variety of cellular activities Thert_02683 SM00028 Tetratricopeptide repeats Thert_02724 SM00487 DEAD-like helicases superfamily Thert_02724 SM00490 helicase superfamily c-terminal domain Thert_02731 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_02737 SM00487 DEAD-like helicases superfamily Thert_02760 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_02760 SM00895 Thert_02760 Thert_02765 SM00633 Glycosyl hydrolase family 10 Thert_02773 SM00342 helix_turn_helix, arabinose operon control protein Thert_02773 SM00448 cheY-homologous receiver domain Thert_02774 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_02774 SM00387 Histidine kinase-like ATPases Thert_02775 SM00633 Glycosyl hydrolase family 10 Thert_02788 SM00382 ATPases associated with a variety of cellular activities Thert_02799 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Thert_02799 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thert_02814 SM00831 Cation transporter/ATPase, N-terminus Thert_02817 SM00562 Thert_02817 Thert_02822 SM00849 Metallo-beta-lactamase superfamily Thert_02826 SM00014 Acid phosphatase homologues Thert_02832 SM01001 AIR carboxylase Thert_02848 SM00354 helix_turn _helix lactose operon repressor Thert_02851 SM00354 helix_turn _helix lactose operon repressor Thert_02863 SM01130 Thert_02863 Thert_02864 SM00859 Semialdehyde dehydrogenase, NAD binding domain Thert_02868 SM01230 Thert_02868 Thert_02869 SM00448 cheY-homologous receiver domain Thert_02869 SM01012 Thert_02869 Thert_02880 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_02885 SM00636 Thert_02885 Thert_02896 SM00857 Resolvase, N terminal domain Thert_02903 SM00331 Sigma factor PP2C-like phosphatases Thert_02907 SM00981 Thert_02907 Thert_02916 SM00740 Thert_02916 Thert_02929 SM00842 Cell division protein FtsA Thert_02930 SM00864 Tubulin/FtsZ family, GTPase domain Thert_02930 SM00865 Tubulin/FtsZ family, C-terminal domain Thert_02936 SM00448 cheY-homologous receiver domain Thert_02936 SM00862 Transcriptional regulatory protein, C terminal Thert_02937 SM00091 PAS domain Thert_02937 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_02937 SM00387 Histidine kinase-like ATPases Thert_02937 SM00388 His Kinase A (phosphoacceptor) domain Thert_02941 SM00382 ATPases associated with a variety of cellular activities Thert_02951 SM01207 Thert_02951 Thert_02956 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thert_02956 SM00895 Thert_02956 Thert_02961 SM00893 Electron transfer flavoprotein domain Thert_02962 SM00893 Electron transfer flavoprotein domain Thert_02972 SM00893 Electron transfer flavoprotein domain Thert_02973 SM00893 Electron transfer flavoprotein domain Thert_02979 SM00881 CoA binding domain Thert_02982 SM00636 Thert_02982 Thert_02986 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_02992 SM00506 Appr-1"-p processing enzyme Thert_02999 SM00849 Metallo-beta-lactamase superfamily Thert_03002 SM00062 Bacterial periplasmic substrate-binding proteins Thert_03003 SM00382 ATPases associated with a variety of cellular activities Thert_03019 SM00448 cheY-homologous receiver domain Thert_03019 SM00862 Transcriptional regulatory protein, C terminal Thert_03020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_03020 SM00387 Histidine kinase-like ATPases Thert_03020 SM00388 His Kinase A (phosphoacceptor) domain Thert_03022 SM00257 Lysin motif Thert_03033 SM00448 cheY-homologous receiver domain Thert_03033 SM00862 Transcriptional regulatory protein, C terminal Thert_03035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thert_03035 SM00387 Histidine kinase-like ATPases Thert_03035 SM00388 His Kinase A (phosphoacceptor) domain Thert_03040 SM01211 Thert_03040 Thert_03044 SM00422 helix_turn_helix, mercury resistance Thert_03046 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_03053 SM00530 Helix-turn-helix XRE-family like proteins Thert_03060 SM00382 ATPases associated with a variety of cellular activities Thert_03061 SM00382 ATPases associated with a variety of cellular activities Thert_03069 SM01004 Delta-aminolevulinic acid dehydratase Thert_03073 SM00232 JAB/MPN domain Thert_03079 SM00382 ATPases associated with a variety of cellular activities Thert_03097 SM00881 CoA binding domain Thert_03103 SM00260 Two component signalling adaptor domain Thert_03106 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thert_03107 SM00382 ATPases associated with a variety of cellular activities Thert_03112 SM01323 Thert_03112 Thert_03126 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_03126 SM00954 Region found in RelA / SpoT proteins Thert_03128 SM00849 Metallo-beta-lactamase superfamily Thert_03135 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Thert_03139 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Thert_03152 SM00072 Guanylate kinase homologues. Thert_03153 SM01409 Thert_03153 Thert_03156 SM00487 DEAD-like helicases superfamily Thert_03156 SM00490 helicase superfamily c-terminal domain Thert_03163 SM00331 Sigma factor PP2C-like phosphatases Thert_03163 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Thert_03165 SM00220 Serine/Threonine protein kinases, catalytic domain Thert_03165 SM00740 Thert_03165 Thert_03169 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Thert_03173 SM01120 Thert_03173 Thert_03173 SM01121 Thert_03173 Thert_03174 SM00487 DEAD-like helicases superfamily Thert_03174 SM00490 helicase superfamily c-terminal domain Thert_03197 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Thert_03198 SM00822 Thert_03198 Thert_03200 SM00825 Beta-ketoacyl synthase Thert_03201 SM00358 Double-stranded RNA binding motif Thert_03201 SM00535 Ribonuclease III family Thert_03202 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_03205 SM00968 SMC proteins Flexible Hinge Domain Thert_03206 SM00382 ATPases associated with a variety of cellular activities Thert_03206 SM00962 SRP54-type protein, GTPase domain Thert_03206 SM00963 SRP54-type protein, helical bundle domain Thert_03213 SM00382 ATPases associated with a variety of cellular activities Thert_03217 SM00382 ATPases associated with a variety of cellular activities Thert_03217 SM00962 SRP54-type protein, GTPase domain Thert_03217 SM00963 SRP54-type protein, helical bundle domain Thert_03224 SM00382 ATPases associated with a variety of cellular activities Thert_03229 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Thert_03229 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Thert_03229 SM00493 Thert_03229 Thert_03232 SM00382 ATPases associated with a variety of cellular activities Thert_03232 SM01086 C-terminal, D2-small domain, of ClpB protein Thert_03243 SM00382 ATPases associated with a variety of cellular activities Thert_03256 SM00448 cheY-homologous receiver domain Thert_03264 SM00382 ATPases associated with a variety of cellular activities Thert_03264 SM00962 SRP54-type protein, GTPase domain Thert_03268 SM00073 Histidine Phosphotransfer domain Thert_03268 SM00260 Two component signalling adaptor domain Thert_03268 SM00387 Histidine kinase-like ATPases Thert_03268 SM01231 Thert_03268 Thert_03269 SM00260 Two component signalling adaptor domain Thert_03283 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_03289 SM00479 Thert_03289 Thert_03289 SM00481 DNA polymerase alpha chain like domain Thert_03291 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_03300 SM00904 Riboflavin kinase Thert_03301 SM01387 Thert_03301 Thert_03303 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_03303 SM00322 K homology RNA-binding domain Thert_03313 SM00382 ATPases associated with a variety of cellular activities Thert_03313 SM00843 Thert_03313 Thert_03314 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_03317 SM00852 Probable molybdopterin binding domain Thert_03318 SM00382 ATPases associated with a variety of cellular activities Thert_03320 SM00933 Thert_03320 Thert_03325 SM00322 K homology RNA-binding domain Thert_03325 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_03329 SM00481 DNA polymerase alpha chain like domain Thert_03331 SM00998 Adenylosuccinate lyase C-terminus Thert_03333 SM00382 ATPases associated with a variety of cellular activities Thert_03341 SM00853 MutL C terminal dimerisation domain Thert_03341 SM01340 Thert_03341 Thert_03342 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Thert_03342 SM00534 ATPase domain of DNA mismatch repair MUTS family Thert_03345 SM00729 Elongator protein 3, MiaB family, Radical SAM Thert_03346 SM00138 Methyltransferase, chemotaxis proteins Thert_03348 SM00316 Ribosomal protein S1-like RNA-binding domain Thert_03350 SM00563 Phosphate acyltransferases Thert_03355 SM00855 Phosphoglycerate mutase family Thert_03365 SM00363 S4 RNA-binding domain Thert_03370 SM00936 Penicillin-binding protein 5, C-terminal domain Thert_03384 SM00387 Histidine kinase-like ATPases Thert_03386 SM00936 Penicillin-binding protein 5, C-terminal domain Thert_03398 SM00448 cheY-homologous receiver domain Thert_03399 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thert_03405 SM00363 S4 RNA-binding domain Thert_03406 SM00861 Transketolase, pyrimidine binding domain Thert_03427 SM00382 ATPases associated with a variety of cellular activities Thert_03429 SM00841 Elongation factor P, C-terminal Thert_03429 SM01185 Thert_03429 Thert_03433 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Thert_03447 SM00382 ATPases associated with a variety of cellular activities Thert_03448 SM00382 ATPases associated with a variety of cellular activities Thert_03451 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thert_03459 SM00849 Metallo-beta-lactamase superfamily Thert_03463 SM00732 Likely ribonuclease with RNase H fold. Thert_03465 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thert_03482 SM00382 ATPases associated with a variety of cellular activities Thert_03491 SM00363 S4 RNA-binding domain Thert_03494 SM00861 Transketolase, pyrimidine binding domain Thert_03506 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thert_03507 SM00052 Putative diguanylate phosphodiesterase Thert_03507 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thert_03507 SM00091 PAS domain Thert_03507 SM00267 diguanylate cyclase Thert_03508 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.