Thexy_0001 SM00382 ATPases associated with a variety of cellular activities Thexy_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Thexy_0002 SM00480 DNA polymerase III beta subunit Thexy_0003 SM00363 S4 RNA-binding domain Thexy_0008 SM00387 Histidine kinase-like ATPases Thexy_0008 SM00433 TopoisomeraseII Thexy_0009 SM00434 DNA Topoisomerase IV Thexy_0010 SM00900 Thexy_0010 Thexy_0017 SM01329 Thexy_0017 Thexy_0032 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thexy_0032 SM00091 PAS domain Thexy_0032 SM00267 diguanylate cyclase Thexy_0032 SM00448 cheY-homologous receiver domain Thexy_0035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_0036 SM00260 Two component signalling adaptor domain Thexy_0037 SM00448 cheY-homologous receiver domain Thexy_0039 SM00138 Methyltransferase, chemotaxis proteins Thexy_0040 SM00052 Putative diguanylate phosphodiesterase Thexy_0040 SM00267 diguanylate cyclase Thexy_0045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thexy_0045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thexy_0045 SM00091 PAS domain Thexy_0045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_0045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_0046 SM00382 ATPases associated with a variety of cellular activities Thexy_0048 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thexy_0048 SM00493 Thexy_0048 Thexy_0051 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_0061 SM00363 S4 RNA-binding domain Thexy_0063 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_0065 SM00849 Metallo-beta-lactamase superfamily Thexy_0068 SM00986 Uracil DNA glycosylase superfamily Thexy_0068 SM00987 UreE urease accessory protein, C-terminal domain Thexy_0086 SM00966 SpoVT / AbrB like domain Thexy_0091 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_0092 SM00382 ATPases associated with a variety of cellular activities Thexy_0097 SM01208 Thexy_0097 Thexy_0098 SM00650 Ribosomal RNA adenine dimethylases Thexy_0104 SM00382 ATPases associated with a variety of cellular activities Thexy_0119 SM00487 DEAD-like helicases superfamily Thexy_0119 SM00490 helicase superfamily c-terminal domain Thexy_0123 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_0131 SM01321 Thexy_0131 Thexy_0142 SM00354 helix_turn _helix lactose operon repressor Thexy_0147 SM01400 Thexy_0147 Thexy_0148 SM00448 cheY-homologous receiver domain Thexy_0148 SM00862 Transcriptional regulatory protein, C terminal Thexy_0149 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_0149 SM00387 Histidine kinase-like ATPases Thexy_0149 SM00388 His Kinase A (phosphoacceptor) domain Thexy_0150 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_0153 SM00487 DEAD-like helicases superfamily Thexy_0153 SM00490 helicase superfamily c-terminal domain Thexy_0153 SM00982 Thexy_0153 Thexy_0153 SM01058 CarD-like/TRCF domain Thexy_0155 SM00966 SpoVT / AbrB like domain Thexy_0158 SM00257 Lysin motif Thexy_0160 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_0160 SM00895 Thexy_0160 Thexy_0180 SM00836 DALR anticodon binding domain Thexy_0180 SM01016 Arginyl tRNA synthetase N terminal dom Thexy_0192 SM00014 Acid phosphatase homologues Thexy_0195 SM00487 DEAD-like helicases superfamily Thexy_0195 SM00490 helicase superfamily c-terminal domain Thexy_0202 SM00859 Semialdehyde dehydrogenase, NAD binding domain Thexy_0206 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Thexy_0207 SM00851 MGS-like domain Thexy_0207 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Thexy_0210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thexy_0211 SM00450 Rhodanese Homology Domain Thexy_0213 SM00529 Helix-turn-helix diphteria tox regulatory element Thexy_0219 SM00028 Tetratricopeptide repeats Thexy_0219 SM00530 Helix-turn-helix XRE-family like proteins Thexy_0221 SM00411 bacterial (prokaryotic) histone like domain Thexy_0222 SM00363 S4 RNA-binding domain Thexy_0226 SM00116 Domain in cystathionine beta-synthase and other proteins. Thexy_0226 SM01131 Thexy_0226 Thexy_0229 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_0235 SM00646 Thexy_0235 Thexy_0241 SM00890 Domain of unknown function Thexy_0254 SM00331 Sigma factor PP2C-like phosphatases Thexy_0256 SM00220 Serine/Threonine protein kinases, catalytic domain Thexy_0257 SM00977 TilS substrate C-terminal domain Thexy_0259 SM00382 ATPases associated with a variety of cellular activities Thexy_0260 SM00342 helix_turn_helix, arabinose operon control protein Thexy_0262 SM00091 PAS domain Thexy_0262 SM00387 Histidine kinase-like ATPases Thexy_0288 SM00305 Hint (Hedgehog/Intein) domain C-terminal region Thexy_0288 SM00306 Hint (Hedgehog/Intein) domain N-terminal region Thexy_0289 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thexy_0289 SM00267 diguanylate cyclase Thexy_0296 SM00838 Elongation factor G C-terminus Thexy_0296 SM00889 Elongation factor G, domain IV Thexy_0297 SM00919 Malic enzyme, NAD binding domain Thexy_0297 SM01274 Thexy_0297 Thexy_0302 SM00382 ATPases associated with a variety of cellular activities Thexy_0302 SM01086 C-terminal, D2-small domain, of ClpB protein Thexy_0303 SM00382 ATPases associated with a variety of cellular activities Thexy_0305 SM00670 Large family of predicted nucleotide-binding domains Thexy_0313 SM00840 Thexy_0313 Thexy_0315 SM00967 RNA 2'-O ribose methyltransferase substrate binding Thexy_0321 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Thexy_0321 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thexy_0322 SM00649 Ribosomal protein L11/L12 Thexy_0327 SM00663 RNA polymerase I subunit A N-terminus Thexy_0331 SM00838 Elongation factor G C-terminus Thexy_0331 SM00889 Elongation factor G, domain IV Thexy_0333 SM01403 Thexy_0333 Thexy_0337 SM01382 Thexy_0337 Thexy_0337 SM01383 Thexy_0337 Thexy_0340 SM00322 K homology RNA-binding domain Thexy_0344 SM01374 Thexy_0344 Thexy_0345 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thexy_0358 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_0362 SM00363 S4 RNA-binding domain Thexy_0362 SM01390 Thexy_0362 Thexy_0363 SM00662 RNA polymerases D Thexy_0365 SM00382 ATPases associated with a variety of cellular activities Thexy_0366 SM00382 ATPases associated with a variety of cellular activities Thexy_0378 SM00257 Lysin motif Thexy_0379 SM00646 Thexy_0379 Thexy_0382 SM00460 Transglutaminase/protease-like homologues Thexy_0391 SM00563 Phosphate acyltransferases Thexy_0398 SM00530 Helix-turn-helix XRE-family like proteins Thexy_0407 SM00257 Lysin motif Thexy_0418 SM01005 Alanine racemase, C-terminal domain Thexy_0439 SM01068 Putative carbohydrate binding domain Thexy_0440 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_0442 SM00244 prohibitin homologues Thexy_0463 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thexy_0475 SM01207 Thexy_0475 Thexy_0476 SM00226 Low molecular weight phosphatase family Thexy_0478 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Thexy_0485 SM00091 PAS domain Thexy_0485 SM00382 ATPases associated with a variety of cellular activities Thexy_0487 SM01120 Thexy_0487 Thexy_0489 SM00849 Metallo-beta-lactamase superfamily Thexy_0495 SM00382 ATPases associated with a variety of cellular activities Thexy_0497 SM00842 Cell division protein FtsA Thexy_0501 SM00382 ATPases associated with a variety of cellular activities Thexy_0509 SM00382 ATPases associated with a variety of cellular activities Thexy_0516 SM00382 ATPases associated with a variety of cellular activities Thexy_0519 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_0519 SM00245 tail specific protease Thexy_0520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_0522 SM00487 DEAD-like helicases superfamily Thexy_0522 SM00490 helicase superfamily c-terminal domain Thexy_0523 SM00382 ATPases associated with a variety of cellular activities Thexy_0524 SM00240 Forkhead associated domain Thexy_0527 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thexy_0527 SM00465 GIY-YIG type nucleases (URI domain) Thexy_0528 SM00382 ATPases associated with a variety of cellular activities Thexy_0530 SM00062 Bacterial periplasmic substrate-binding proteins Thexy_0533 SM00481 DNA polymerase alpha chain like domain Thexy_0537 SM00354 helix_turn _helix lactose operon repressor Thexy_0542 SM00382 ATPases associated with a variety of cellular activities Thexy_0549 SM00813 Alpha-L-arabinofuranosidase C-terminus Thexy_0552 SM00382 ATPases associated with a variety of cellular activities Thexy_0556 SM01007 Class II Aldolase and Adducin N-terminal domain Thexy_0558 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_0560 SM00831 Cation transporter/ATPase, N-terminus Thexy_0565 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thexy_0570 SM00419 helix_turn_helix, cAMP Regulatory protein Thexy_0580 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Thexy_0592 SM00534 ATPase domain of DNA mismatch repair MUTS family Thexy_0593 SM00534 ATPase domain of DNA mismatch repair MUTS family Thexy_0597 SM01192 Thexy_0597 Thexy_0597 SM01193 Thexy_0597 Thexy_0602 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thexy_0602 SM00481 DNA polymerase alpha chain like domain Thexy_0602 SM00483 DNA polymerase X family Thexy_0611 SM00481 DNA polymerase alpha chain like domain Thexy_0614 SM00060 Fibronectin type 3 domain Thexy_0614 SM00632 Thexy_0614 Thexy_0614 SM00642 Alpha-amylase domain Thexy_0614 SM01065 Starch binding domain Thexy_0618 SM00632 Thexy_0618 Thexy_0618 SM00642 Alpha-amylase domain Thexy_0618 SM01065 Starch binding domain Thexy_0619 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_0619 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_0626 SM00642 Alpha-amylase domain Thexy_0631 SM00116 Domain in cystathionine beta-synthase and other proteins. Thexy_0632 SM00481 DNA polymerase alpha chain like domain Thexy_0650 SM00062 Bacterial periplasmic substrate-binding proteins Thexy_0650 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Thexy_0652 SM00382 ATPases associated with a variety of cellular activities Thexy_0655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_0659 SM00957 SecA DEAD-like domain Thexy_0659 SM00958 SecA preprotein cross-linking domain Thexy_0661 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_0661 SM00732 Likely ribonuclease with RNase H fold. Thexy_0673 SM00382 ATPases associated with a variety of cellular activities Thexy_0676 SM00881 CoA binding domain Thexy_0679 SM00478 endonuclease III Thexy_0686 SM00028 Tetratricopeptide repeats Thexy_0686 SM00530 Helix-turn-helix XRE-family like proteins Thexy_0688 SM00382 ATPases associated with a variety of cellular activities Thexy_0689 SM00382 ATPases associated with a variety of cellular activities Thexy_0695 SM00382 ATPases associated with a variety of cellular activities Thexy_0704 SM00883 Chaperonin 10 Kd subunit Thexy_0706 SM00116 Domain in cystathionine beta-synthase and other proteins. Thexy_0706 SM01240 Thexy_0706 Thexy_0709 SM01001 AIR carboxylase Thexy_0714 SM00798 AICARFT/IMPCHase bienzyme Thexy_0714 SM00851 MGS-like domain Thexy_0715 SM01209 Thexy_0715 Thexy_0715 SM01210 Thexy_0715 Thexy_0723 SM00382 ATPases associated with a variety of cellular activities Thexy_0723 SM00930 Thexy_0723 Thexy_0731 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thexy_0731 SM00292 breast cancer carboxy-terminal domain Thexy_0731 SM00532 Ligase N family Thexy_0734 SM00845 GatB domain Thexy_0739 SM00382 ATPases associated with a variety of cellular activities Thexy_0740 SM00382 ATPases associated with a variety of cellular activities Thexy_0741 SM00646 Thexy_0741 Thexy_0751 SM00831 Cation transporter/ATPase, N-terminus Thexy_0765 SM00028 Tetratricopeptide repeats Thexy_0776 SM00917 LeuA allosteric (dimerisation) domain Thexy_0794 SM00382 ATPases associated with a variety of cellular activities Thexy_0800 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_0807 SM00478 endonuclease III Thexy_0807 SM00525 Thexy_0807 Thexy_0808 SM01208 Thexy_0808 Thexy_0814 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Thexy_0818 SM01192 Thexy_0818 Thexy_0818 SM01193 Thexy_0818 Thexy_0822 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_0823 SM00400 zinc finger Thexy_0823 SM00493 Thexy_0823 Thexy_0831 SM00849 Metallo-beta-lactamase superfamily Thexy_0832 SM00636 Thexy_0832 Thexy_0835 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Thexy_0843 SM00357 Cold shock protein domain Thexy_0846 SM00870 Thexy_0846 Thexy_0863 SM00091 PAS domain Thexy_0863 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_0863 SM00387 Histidine kinase-like ATPases Thexy_0863 SM00388 His Kinase A (phosphoacceptor) domain Thexy_0864 SM00448 cheY-homologous receiver domain Thexy_0865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Thexy_0865 SM00091 PAS domain Thexy_0865 SM00267 diguanylate cyclase Thexy_0865 SM00448 cheY-homologous receiver domain Thexy_0874 SM00382 ATPases associated with a variety of cellular activities Thexy_0878 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_0899 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_0899 SM00876 Biotin and Thiamin Synthesis associated domain Thexy_0900 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_0900 SM00876 Biotin and Thiamin Synthesis associated domain Thexy_0905 SM00849 Metallo-beta-lactamase superfamily Thexy_0907 SM00448 cheY-homologous receiver domain Thexy_0907 SM00862 Transcriptional regulatory protein, C terminal Thexy_0908 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_0908 SM00387 Histidine kinase-like ATPases Thexy_0908 SM00388 His Kinase A (phosphoacceptor) domain Thexy_0912 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_0923 SM00831 Cation transporter/ATPase, N-terminus Thexy_0936 SM00640 Glycosyl hydrolases family 32 Thexy_0939 SM00642 Alpha-amylase domain Thexy_0940 SM00354 helix_turn _helix lactose operon repressor Thexy_0947 SM00382 ATPases associated with a variety of cellular activities Thexy_0953 SM00858 Thexy_0953 Thexy_0955 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Thexy_0972 SM00487 DEAD-like helicases superfamily Thexy_0972 SM00490 helicase superfamily c-terminal domain Thexy_0976 SM00487 DEAD-like helicases superfamily Thexy_0976 SM00490 helicase superfamily c-terminal domain Thexy_0981 SM00387 Histidine kinase-like ATPases Thexy_0982 SM00448 cheY-homologous receiver domain Thexy_0982 SM00850 LytTr DNA-binding domain Thexy_0985 SM00382 ATPases associated with a variety of cellular activities Thexy_0988 SM00448 cheY-homologous receiver domain Thexy_0988 SM00862 Transcriptional regulatory protein, C terminal Thexy_0989 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_0989 SM00387 Histidine kinase-like ATPases Thexy_0989 SM00388 His Kinase A (phosphoacceptor) domain Thexy_0997 SM00448 cheY-homologous receiver domain Thexy_0998 SM00567 E-Z type HEAT repeats Thexy_1000 SM00267 diguanylate cyclase Thexy_1012 SM00938 Nitrogen regulatory protein P-II Thexy_1017 SM00267 diguanylate cyclase Thexy_1017 SM00448 cheY-homologous receiver domain Thexy_1021 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thexy_1027 SM00967 RNA 2'-O ribose methyltransferase substrate binding Thexy_1029 SM00873 B3/4 domain Thexy_1029 SM00874 tRNA synthetase B5 domain Thexy_1029 SM00896 Ferredoxin-fold anticodon binding domain Thexy_1032 SM00463 Small MutS-related domain Thexy_1032 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Thexy_1032 SM00534 ATPase domain of DNA mismatch repair MUTS family Thexy_1034 SM00387 Histidine kinase-like ATPases Thexy_1035 SM00421 helix_turn_helix, Lux Regulon Thexy_1035 SM00448 cheY-homologous receiver domain Thexy_1050 SM00981 Thexy_1050 Thexy_1058 SM00740 Thexy_1058 Thexy_1069 SM00842 Cell division protein FtsA Thexy_1070 SM00864 Tubulin/FtsZ family, GTPase domain Thexy_1070 SM00865 Tubulin/FtsZ family, C-terminal domain Thexy_1076 SM00448 cheY-homologous receiver domain Thexy_1076 SM00862 Transcriptional regulatory protein, C terminal Thexy_1077 SM00091 PAS domain Thexy_1077 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_1077 SM00387 Histidine kinase-like ATPases Thexy_1077 SM00388 His Kinase A (phosphoacceptor) domain Thexy_1081 SM00382 ATPases associated with a variety of cellular activities Thexy_1089 SM01207 Thexy_1089 Thexy_1093 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1096 SM00506 Appr-1"-p processing enzyme Thexy_1101 SM00849 Metallo-beta-lactamase superfamily Thexy_1114 SM00448 cheY-homologous receiver domain Thexy_1114 SM00862 Transcriptional regulatory protein, C terminal Thexy_1115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_1115 SM00387 Histidine kinase-like ATPases Thexy_1115 SM00388 His Kinase A (phosphoacceptor) domain Thexy_1117 SM00257 Lysin motif Thexy_1128 SM00448 cheY-homologous receiver domain Thexy_1128 SM00862 Transcriptional regulatory protein, C terminal Thexy_1129 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_1129 SM00387 Histidine kinase-like ATPases Thexy_1129 SM00388 His Kinase A (phosphoacceptor) domain Thexy_1132 SM01211 Thexy_1132 Thexy_1134 SM00422 helix_turn_helix, mercury resistance Thexy_1137 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1141 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thexy_1143 SM00732 Likely ribonuclease with RNase H fold. Thexy_1146 SM00849 Metallo-beta-lactamase superfamily Thexy_1155 SM00382 ATPases associated with a variety of cellular activities Thexy_1156 SM00382 ATPases associated with a variety of cellular activities Thexy_1169 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Thexy_1173 SM00841 Elongation factor P, C-terminal Thexy_1173 SM01185 Thexy_1173 Thexy_1175 SM00382 ATPases associated with a variety of cellular activities Thexy_1190 SM00861 Transketolase, pyrimidine binding domain Thexy_1191 SM00363 S4 RNA-binding domain Thexy_1195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_1196 SM00448 cheY-homologous receiver domain Thexy_1206 SM00936 Penicillin-binding protein 5, C-terminal domain Thexy_1208 SM00387 Histidine kinase-like ATPases Thexy_1221 SM00936 Penicillin-binding protein 5, C-terminal domain Thexy_1224 SM00363 S4 RNA-binding domain Thexy_1229 SM00257 Lysin motif Thexy_1233 SM00855 Phosphoglycerate mutase family Thexy_1237 SM00563 Phosphate acyltransferases Thexy_1239 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_1241 SM00138 Methyltransferase, chemotaxis proteins Thexy_1242 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1244 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Thexy_1244 SM00534 ATPase domain of DNA mismatch repair MUTS family Thexy_1245 SM00853 MutL C terminal dimerisation domain Thexy_1245 SM01340 Thexy_1245 Thexy_1253 SM00382 ATPases associated with a variety of cellular activities Thexy_1255 SM00998 Adenylosuccinate lyase C-terminus Thexy_1257 SM00481 DNA polymerase alpha chain like domain Thexy_1260 SM00322 K homology RNA-binding domain Thexy_1260 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_1265 SM00933 Thexy_1265 Thexy_1267 SM00382 ATPases associated with a variety of cellular activities Thexy_1268 SM00852 Probable molybdopterin binding domain Thexy_1270 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1271 SM00382 ATPases associated with a variety of cellular activities Thexy_1271 SM00843 Thexy_1271 Thexy_1280 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_1280 SM00322 K homology RNA-binding domain Thexy_1281 SM01387 Thexy_1281 Thexy_1282 SM00904 Riboflavin kinase Thexy_1289 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_1291 SM00479 Thexy_1291 Thexy_1291 SM00481 DNA polymerase alpha chain like domain Thexy_1294 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_1308 SM00260 Two component signalling adaptor domain Thexy_1309 SM00073 Histidine Phosphotransfer domain Thexy_1309 SM00260 Two component signalling adaptor domain Thexy_1309 SM00387 Histidine kinase-like ATPases Thexy_1309 SM01231 Thexy_1309 Thexy_1312 SM00382 ATPases associated with a variety of cellular activities Thexy_1312 SM00962 SRP54-type protein, GTPase domain Thexy_1319 SM00448 cheY-homologous receiver domain Thexy_1329 SM00382 ATPases associated with a variety of cellular activities Thexy_1337 SM00382 ATPases associated with a variety of cellular activities Thexy_1337 SM01086 C-terminal, D2-small domain, of ClpB protein Thexy_1339 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Thexy_1339 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Thexy_1339 SM00493 Thexy_1339 Thexy_1344 SM00382 ATPases associated with a variety of cellular activities Thexy_1351 SM00382 ATPases associated with a variety of cellular activities Thexy_1351 SM00962 SRP54-type protein, GTPase domain Thexy_1351 SM00963 SRP54-type protein, helical bundle domain Thexy_1353 SM00382 ATPases associated with a variety of cellular activities Thexy_1353 SM00962 SRP54-type protein, GTPase domain Thexy_1353 SM00963 SRP54-type protein, helical bundle domain Thexy_1354 SM00968 SMC proteins Flexible Hinge Domain Thexy_1356 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1357 SM00358 Double-stranded RNA binding motif Thexy_1357 SM00535 Ribonuclease III family Thexy_1358 SM00825 Beta-ketoacyl synthase Thexy_1360 SM00822 Thexy_1360 Thexy_1361 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Thexy_1377 SM00487 DEAD-like helicases superfamily Thexy_1377 SM00490 helicase superfamily c-terminal domain Thexy_1378 SM01120 Thexy_1378 Thexy_1378 SM01121 Thexy_1378 Thexy_1383 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Thexy_1386 SM00220 Serine/Threonine protein kinases, catalytic domain Thexy_1386 SM00740 Thexy_1386 Thexy_1387 SM00331 Sigma factor PP2C-like phosphatases Thexy_1387 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Thexy_1394 SM00487 DEAD-like helicases superfamily Thexy_1394 SM00490 helicase superfamily c-terminal domain Thexy_1396 SM01409 Thexy_1396 Thexy_1397 SM00072 Guanylate kinase homologues. Thexy_1405 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Thexy_1409 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Thexy_1414 SM00849 Metallo-beta-lactamase superfamily Thexy_1416 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_1416 SM00954 Region found in RelA / SpoT proteins Thexy_1426 SM01323 Thexy_1426 Thexy_1433 SM00382 ATPases associated with a variety of cellular activities Thexy_1434 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thexy_1437 SM00260 Two component signalling adaptor domain Thexy_1443 SM00881 CoA binding domain Thexy_1452 SM00382 ATPases associated with a variety of cellular activities Thexy_1459 SM00363 S4 RNA-binding domain Thexy_1462 SM00861 Transketolase, pyrimidine binding domain Thexy_1480 SM00363 S4 RNA-binding domain Thexy_1486 SM01230 Thexy_1486 Thexy_1488 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_1488 SM00357 Cold shock protein domain Thexy_1488 SM00955 Thexy_1488 Thexy_1497 SM01133 Thexy_1497 Thexy_1499 SM00014 Acid phosphatase homologues Thexy_1501 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_1508 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1511 SM00271 DnaJ molecular chaperone homology domain Thexy_1515 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1516 SM00838 Elongation factor G C-terminus Thexy_1520 SM00646 Thexy_1520 Thexy_1526 SM00849 Metallo-beta-lactamase superfamily Thexy_1527 SM00849 Metallo-beta-lactamase superfamily Thexy_1530 SM00347 helix_turn_helix multiple antibiotic resistance protein Thexy_1531 SM00382 ATPases associated with a variety of cellular activities Thexy_1533 SM00831 Cation transporter/ATPase, N-terminus Thexy_1536 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Thexy_1551 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Thexy_1552 SM00936 Penicillin-binding protein 5, C-terminal domain Thexy_1556 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_1563 SM00316 Ribosomal protein S1-like RNA-binding domain Thexy_1565 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_1568 SM00851 MGS-like domain Thexy_1580 SM00902 Iron hydrogenase small subunit Thexy_1580 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Thexy_1581 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Thexy_1583 SM00387 Histidine kinase-like ATPases Thexy_1585 SM00481 DNA polymerase alpha chain like domain Thexy_1592 SM00838 Elongation factor G C-terminus Thexy_1593 SM00287 Bacterial SH3 domain homologues Thexy_1599 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Thexy_1599 SM00475 5'-3' exonuclease Thexy_1599 SM00482 DNA polymerase A domain Thexy_1606 SM00636 Thexy_1606 Thexy_1611 SM00387 Histidine kinase-like ATPases Thexy_1611 SM00388 His Kinase A (phosphoacceptor) domain Thexy_1614 SM00448 cheY-homologous receiver domain Thexy_1614 SM00862 Transcriptional regulatory protein, C terminal Thexy_1622 SM00382 ATPases associated with a variety of cellular activities Thexy_1625 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thexy_1627 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Thexy_1627 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Thexy_1634 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Thexy_1644 SM00636 Thexy_1644 Thexy_1647 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_1652 SM00448 cheY-homologous receiver domain Thexy_1652 SM01012 Thexy_1652 Thexy_1653 SM01230 Thexy_1653 Thexy_1656 SM00859 Semialdehyde dehydrogenase, NAD binding domain Thexy_1657 SM01130 Thexy_1657 Thexy_1668 SM00354 helix_turn _helix lactose operon repressor Thexy_1673 SM00354 helix_turn _helix lactose operon repressor Thexy_1687 SM01001 AIR carboxylase Thexy_1691 SM00014 Acid phosphatase homologues Thexy_1693 SM00849 Metallo-beta-lactamase superfamily Thexy_1697 SM00562 Thexy_1697 Thexy_1699 SM00831 Cation transporter/ATPase, N-terminus Thexy_1710 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Thexy_1710 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Thexy_1721 SM00382 ATPases associated with a variety of cellular activities Thexy_1729 SM00633 Glycosyl hydrolase family 10 Thexy_1730 SM00633 Glycosyl hydrolase family 10 Thexy_1734 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_1734 SM00387 Histidine kinase-like ATPases Thexy_1735 SM00342 helix_turn_helix, arabinose operon control protein Thexy_1735 SM00448 cheY-homologous receiver domain Thexy_1747 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_1747 SM00895 Thexy_1747 Thexy_1758 SM00382 ATPases associated with a variety of cellular activities Thexy_1762 SM00530 Helix-turn-helix XRE-family like proteins Thexy_1764 SM00487 DEAD-like helicases superfamily Thexy_1764 SM00490 helicase superfamily c-terminal domain Thexy_1773 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_1776 SM00487 DEAD-like helicases superfamily Thexy_1776 SM00490 helicase superfamily c-terminal domain Thexy_1796 SM00984 UDP binding domain Thexy_1807 SM01321 Thexy_1807 Thexy_1814 SM00028 Tetratricopeptide repeats Thexy_1816 SM00382 ATPases associated with a variety of cellular activities Thexy_1822 SM00382 ATPases associated with a variety of cellular activities Thexy_1830 SM00382 ATPases associated with a variety of cellular activities Thexy_1830 SM00464 Found in ATP-dependent protease La (LON) Thexy_1832 SM00382 ATPases associated with a variety of cellular activities Thexy_1832 SM00994 ClpX C4-type zinc finger Thexy_1832 SM01086 C-terminal, D2-small domain, of ClpB protein Thexy_1836 SM00518 AP endonuclease family 2 Thexy_1842 SM01018 B12 binding domain Thexy_1853 SM00488 Thexy_1853 Thexy_1853 SM00491 Thexy_1853 Thexy_1876 SM00858 Thexy_1876 Thexy_1884 SM01321 Thexy_1884 Thexy_1897 SM00382 ATPases associated with a variety of cellular activities Thexy_1899 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_1906 SM00909 Sporulation and spore germination Thexy_1907 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_1907 SM00387 Histidine kinase-like ATPases Thexy_1907 SM00388 His Kinase A (phosphoacceptor) domain Thexy_1908 SM00448 cheY-homologous receiver domain Thexy_1908 SM00862 Transcriptional regulatory protein, C terminal Thexy_1910 SM00354 helix_turn _helix lactose operon repressor Thexy_1922 SM00854 Bacterial capsule synthesis protein PGA_cap Thexy_1927 SM01061 CAT RNA binding domain Thexy_1931 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_1932 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Thexy_1935 SM00345 helix_turn_helix gluconate operon transcriptional repressor Thexy_1935 SM00866 Thexy_1935 Thexy_1938 SM00382 ATPases associated with a variety of cellular activities Thexy_1941 SM01221 Thexy_1941 Thexy_1941 SM01222 Thexy_1941 Thexy_1943 SM00890 Domain of unknown function Thexy_1944 SM01329 Thexy_1944 Thexy_1947 SM00900 Thexy_1947 Thexy_1950 SM00271 DnaJ molecular chaperone homology domain Thexy_1963 SM00382 ATPases associated with a variety of cellular activities Thexy_1975 SM00981 Thexy_1975 Thexy_1978 SM00344 helix_turn_helix ASNC type Thexy_1982 SM00899 Thexy_1982 Thexy_1983 SM00014 Acid phosphatase homologues Thexy_1986 SM00382 ATPases associated with a variety of cellular activities Thexy_1993 SM00287 Bacterial SH3 domain homologues Thexy_1993 SM00854 Bacterial capsule synthesis protein PGA_cap Thexy_1999 SM00382 ATPases associated with a variety of cellular activities Thexy_2011 SM00448 cheY-homologous receiver domain Thexy_2012 SM00138 Methyltransferase, chemotaxis proteins Thexy_2013 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_2013 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2014 SM00073 Histidine Phosphotransfer domain Thexy_2014 SM00260 Two component signalling adaptor domain Thexy_2014 SM00387 Histidine kinase-like ATPases Thexy_2014 SM01231 Thexy_2014 Thexy_2015 SM00260 Two component signalling adaptor domain Thexy_2016 SM00267 diguanylate cyclase Thexy_2016 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Thexy_2022 SM00382 ATPases associated with a variety of cellular activities Thexy_2025 SM00342 helix_turn_helix, arabinose operon control protein Thexy_2025 SM00448 cheY-homologous receiver domain Thexy_2026 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2026 SM00387 Histidine kinase-like ATPases Thexy_2037 SM00354 helix_turn _helix lactose operon repressor Thexy_2040 SM01350 Thexy_2040 Thexy_2044 SM00420 helix_turn_helix, Deoxyribose operon repressor Thexy_2044 SM01134 Thexy_2044 Thexy_2048 SM00858 Thexy_2048 Thexy_2050 SM00710 Parallel beta-helix repeats Thexy_2055 SM00354 helix_turn _helix lactose operon repressor Thexy_2057 SM00257 Lysin motif Thexy_2072 SM00244 prohibitin homologues Thexy_2086 SM00877 Thexy_2086 Thexy_2090 SM00877 Thexy_2090 Thexy_2091 SM00877 Thexy_2091 Thexy_2092 SM00877 Thexy_2092 Thexy_2093 SM00877 Thexy_2093 Thexy_2102 SM01007 Class II Aldolase and Adducin N-terminal domain Thexy_2103 SM00420 helix_turn_helix, Deoxyribose operon repressor Thexy_2103 SM01134 Thexy_2103 Thexy_2107 SM00849 Metallo-beta-lactamase superfamily Thexy_2107 SM01027 Beta-Casp domain Thexy_2121 SM00382 ATPases associated with a variety of cellular activities Thexy_2127 SM00382 ATPases associated with a variety of cellular activities Thexy_2133 SM01007 Class II Aldolase and Adducin N-terminal domain Thexy_2144 SM00354 helix_turn _helix lactose operon repressor Thexy_2146 SM00849 Metallo-beta-lactamase superfamily Thexy_2146 SM01027 Beta-Casp domain Thexy_2160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_2160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2179 SM00060 Fibronectin type 3 domain Thexy_2179 SM00429 ig-like, plexins, transcription factors Thexy_2194 SM00226 Low molecular weight phosphatase family Thexy_2197 SM00937 Thexy_2197 Thexy_2202 SM00357 Cold shock protein domain Thexy_2202 SM00382 ATPases associated with a variety of cellular activities Thexy_2202 SM00959 Rho termination factor, N-terminal domain Thexy_2205 SM00448 cheY-homologous receiver domain Thexy_2206 SM00646 Thexy_2206 Thexy_2208 SM00382 ATPases associated with a variety of cellular activities Thexy_2209 SM00382 ATPases associated with a variety of cellular activities Thexy_2217 SM00354 helix_turn _helix lactose operon repressor Thexy_2225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_2225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2230 SM00420 helix_turn_helix, Deoxyribose operon repressor Thexy_2230 SM01134 Thexy_2230 Thexy_2241 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2241 SM00387 Histidine kinase-like ATPases Thexy_2241 SM00388 His Kinase A (phosphoacceptor) domain Thexy_2242 SM00448 cheY-homologous receiver domain Thexy_2242 SM00862 Transcriptional regulatory protein, C terminal Thexy_2252 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Thexy_2259 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_2259 SM00245 tail specific protease Thexy_2266 SM00849 Metallo-beta-lactamase superfamily Thexy_2269 SM00382 ATPases associated with a variety of cellular activities Thexy_2270 SM00382 ATPases associated with a variety of cellular activities Thexy_2271 SM00347 helix_turn_helix multiple antibiotic resistance protein Thexy_2277 SM00487 DEAD-like helicases superfamily Thexy_2296 SM00382 ATPases associated with a variety of cellular activities Thexy_2304 SM00855 Phosphoglycerate mutase family Thexy_2309 SM01321 Thexy_2309 Thexy_2310 SM00883 Chaperonin 10 Kd subunit Thexy_2326 SM00530 Helix-turn-helix XRE-family like proteins Thexy_2327 SM00267 diguanylate cyclase Thexy_2330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Thexy_2335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2335 SM00387 Histidine kinase-like ATPases Thexy_2335 SM00388 His Kinase A (phosphoacceptor) domain Thexy_2336 SM00448 cheY-homologous receiver domain Thexy_2336 SM00862 Transcriptional regulatory protein, C terminal Thexy_2338 SM00257 Lysin motif Thexy_2338 SM01208 Thexy_2338 Thexy_2340 SM00382 ATPases associated with a variety of cellular activities Thexy_2344 SM01321 Thexy_2344 Thexy_2352 SM00487 DEAD-like helicases superfamily Thexy_2352 SM00490 helicase superfamily c-terminal domain Thexy_2365 SM01321 Thexy_2365 Thexy_2367 SM00382 ATPases associated with a variety of cellular activities Thexy_2370 SM00382 ATPases associated with a variety of cellular activities Thexy_2375 SM00788 Adenylosuccinate synthetase Thexy_2379 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thexy_2379 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2381 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Thexy_2381 SM00387 Histidine kinase-like ATPases Thexy_2381 SM00388 His Kinase A (phosphoacceptor) domain Thexy_2382 SM00448 cheY-homologous receiver domain Thexy_2382 SM00862 Transcriptional regulatory protein, C terminal Thexy_2384 SM00116 Domain in cystathionine beta-synthase and other proteins. Thexy_2384 SM00924 MgtE intracellular N domain Thexy_2385 SM00100 Cyclic nucleotide-monophosphate binding domain Thexy_2385 SM00419 helix_turn_helix, cAMP Regulatory protein Thexy_2386 SM00382 ATPases associated with a variety of cellular activities Thexy_2400 SM00046 Diacylglycerol kinase catalytic domain (presumed) Thexy_2403 SM00729 Elongator protein 3, MiaB family, Radical SAM Thexy_2403 SM00876 Biotin and Thiamin Synthesis associated domain Thexy_2404 SM00470 ParB-like nuclease domain Thexy_2406 SM00470 ParB-like nuclease domain Thexy_2409 SM01228 Thexy_2409 Thexy_2411 SM00393 Putative single-stranded nucleic acids-binding domain Thexy_2411 SM01245 Thexy_2411 Thexy_2413 SM01234 Thexy_2413