locus-tag class description A3L04_00005 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_00005 PF12911 N-terminal TM domain of oligopeptide transport permease C A3L04_00010 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_00015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A3L04_00020 PF00232 Glycosyl hydrolase family 1 A3L04_00065 PF11495 Archaeal transcriptional regulator TrmB A3L04_00065 PF01978 Sugar-specific transcriptional regulator TrmB A3L04_00070 PF00005 ABC transporter A3L04_00105 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A3L04_00105 PF00175 Oxidoreductase NAD-binding domain A3L04_00105 PF00970 Oxidoreductase FAD-binding domain A3L04_00110 PF00919 Uncharacterized protein family UPF0004 A3L04_00110 PF04055 Radical SAM superfamily A3L04_00110 PF01938 TRAM domain A3L04_00130 PF00535 Glycosyl transferase family 2 A3L04_00135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A3L04_00135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A3L04_00140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A3L04_00140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A3L04_00180 PF04079 Segregation and condensation complex subunit ScpB A3L04_00230 PF00005 ABC transporter A3L04_00235 PF04851 Type III restriction enzyme, res subunit A3L04_00235 PF00271 Helicase conserved C-terminal domain A3L04_00235 PF02151 UvrB/uvrC motif A3L04_00235 PF12344 Ultra-violet resistance protein B A3L04_00235 PF17757 UvrB interaction domain A3L04_00240 PF00459 Inositol monophosphatase family A3L04_00250 PF03764 Elongation factor G, domain IV A3L04_00250 PF00009 Elongation factor Tu GTP binding domain A3L04_00250 PF14492 Elongation Factor G, domain II A3L04_00250 PF03144 Elongation factor Tu domain 2 A3L04_00250 PF00679 Elongation factor G C-terminus A3L04_00280 PF04324 BFD-like [2Fe-2S] binding domain A3L04_00280 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_00285 PF01266 FAD dependent oxidoreductase A3L04_00290 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A3L04_00290 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A3L04_00305 PF03009 Glycerophosphoryl diester phosphodiesterase family A3L04_00340 PF00005 ABC transporter A3L04_00355 PF02347 Glycine cleavage system P-protein A3L04_00360 PF02347 Glycine cleavage system P-protein A3L04_00375 PF00692 dUTPase A3L04_00395 PF00687 Ribosomal protein L1p/L10e family A3L04_00400 PF00298 Ribosomal protein L11, RNA binding domain A3L04_00400 PF03946 Ribosomal protein L11, N-terminal domain A3L04_00415 PF00091 Tubulin/FtsZ family, GTPase domain A3L04_00415 PF12327 FtsZ family, C-terminal domain A3L04_00460 PF01871 AMMECR1 A3L04_00465 PF17845 FbpC C-terminal regulatory nucleotide binding domain A3L04_00465 PF00005 ABC transporter A3L04_00485 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A3L04_00485 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A3L04_00495 PF02445 Quinolinate synthetase A protein A3L04_00505 PF00890 FAD binding domain A3L04_00505 PF02910 Fumarate reductase flavoprotein C-term A3L04_00510 PF14010 Phosphoenolpyruvate carboxylase A3L04_00515 PF00118 TCP-1/cpn60 chaperonin family A3L04_00535 PF17912 MalK OB fold domain A3L04_00535 PF00005 ABC transporter A3L04_00535 PF03459 TOBE domain A3L04_00540 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_00545 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_00570 PF16363 GDP-mannose 4,6 dehydratase A3L04_00575 PF01040 UbiA prenyltransferase family A3L04_00585 PF01925 Sulfite exporter TauE/SafE A3L04_00590 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 A3L04_00590 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain A3L04_00620 PF00248 Aldo/keto reductase family A3L04_00635 PF12804 MobA-like NTP transferase domain A3L04_00660 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase A3L04_00660 PF01676 Metalloenzyme superfamily A3L04_00665 PF00145 C-5 cytosine-specific DNA methylase A3L04_00690 PF01037 Lrp/AsnC ligand binding domain A3L04_00705 PF04389 Peptidase family M28 A3L04_00705 PF02225 PA domain A3L04_00710 PF00535 Glycosyl transferase family 2 A3L04_00725 PF00677 Lumazine binding domain A3L04_00730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A3L04_00730 PF01872 RibD C-terminal domain A3L04_00745 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin A3L04_00780 PF00885 6,7-dimethyl-8-ribityllumazine synthase A3L04_00785 PF00925 GTP cyclohydrolase II A3L04_00785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A3L04_00795 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_00810 PF00899 ThiF family A3L04_00815 PF01230 HIT domain A3L04_00820 PF00312 Ribosomal protein S15 A3L04_00845 PF03819 MazG nucleotide pyrophosphohydrolase domain A3L04_00850 PF01022 Bacterial regulatory protein, arsR family A3L04_00875 PF17763 Glutaminase/Asparaginase C-terminal domain A3L04_00875 PF00710 Asparaginase, N-terminal A3L04_00890 PF08323 Starch synthase catalytic domain A3L04_00890 PF00534 Glycosyl transferases group 1 A3L04_00895 PF01949 Protein of unknown function DUF99 A3L04_00910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP A3L04_00920 PF03576 Peptidase family S58 A3L04_00935 PF08279 HTH domain A3L04_00935 PF03099 Biotin/lipoate A/B protein ligase family A3L04_00935 PF02237 Biotin protein ligase C terminal domain A3L04_00960 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_00965 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system A3L04_00975 PF08402 TOBE domain A3L04_00975 PF00005 ABC transporter A3L04_00980 PF02632 BioY family A3L04_00990 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family A3L04_01000 PF18211 Csm1 subunit domain B A3L04_01010 PF03787 RAMP superfamily A3L04_01020 PF03787 RAMP superfamily A3L04_01050 PF01867 CRISPR associated protein Cas1 A3L04_01065 PF00270 DEAD/DEAH box helicase A3L04_01065 PF00271 Helicase conserved C-terminal domain A3L04_01065 PF18019 HD domain A3L04_01080 PF01411 tRNA synthetases class II (A) A3L04_01080 PF02272 DHHA1 domain A3L04_01080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3L04_01100 PF00149 Calcineurin-like phosphoesterase A3L04_01125 PF02834 LigT like Phosphoesterase A3L04_01135 PF16123 Hydroxyacylglutathione hydrolase C-terminus A3L04_01135 PF00753 Metallo-beta-lactamase superfamily A3L04_01145 PF00156 Phosphoribosyl transferase domain A3L04_01175 PF00391 PEP-utilising enzyme, mobile domain A3L04_01175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A3L04_01175 PF02896 PEP-utilising enzyme, TIM barrel domain A3L04_01195 PF06508 Queuosine biosynthesis protein QueC A3L04_01215 PF00491 Arginase family A3L04_01220 PF01791 DeoC/LacD family aldolase A3L04_01235 PF01842 ACT domain A3L04_01235 PF01817 Chorismate mutase type II A3L04_01235 PF00800 Prephenate dehydratase A3L04_01260 PF01380 SIS domain A3L04_01260 PF00571 CBS domain A3L04_01265 PF01507 Phosphoadenosine phosphosulfate reductase family A3L04_01270 PF01336 OB-fold nucleic acid binding domain A3L04_01270 PF00152 tRNA synthetases class II (D, K and N) A3L04_01295 PF01642 Methylmalonyl-CoA mutase A3L04_01295 PF02310 B12 binding domain A3L04_01345 PF06745 KaiC A3L04_01360 PF17770 Ribonuclease J C-terminal domain A3L04_01360 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A3L04_01360 PF00753 Metallo-beta-lactamase superfamily A3L04_01380 PF07885 Ion channel A3L04_01380 PF02254 TrkA-N domain A3L04_01395 PF02926 THUMP domain A3L04_01395 PF02568 Thiamine biosynthesis protein (ThiI) A3L04_01410 PF00005 ABC transporter A3L04_01415 PF02361 Cobalt transport protein A3L04_01430 PF01939 Endonuclease NucS A3L04_01455 PF01048 Phosphorylase superfamily A3L04_01475 PF12706 Beta-lactamase superfamily domain A3L04_01510 PF04055 Radical SAM superfamily A3L04_01510 PF06463 Molybdenum Cofactor Synthesis C A3L04_01555 PF17864 RuvB AAA lid domain A3L04_01555 PF05491 RuvB C-terminal winged helix domain A3L04_01555 PF05496 Holliday junction DNA helicase RuvB P-loop domain A3L04_01560 PF12169 DNA polymerase III subunits gamma and tau domain III A3L04_01570 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_01570 PF13192 Thioredoxin domain A3L04_01580 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_01585 PF02540 NAD synthase A3L04_01595 PF02391 MoaE protein A3L04_01605 PF06745 KaiC A3L04_01610 PF18073 Rubredoxin metal binding domain A3L04_01630 PF00596 Class II Aldolase and Adducin N-terminal domain A3L04_01655 PF00717 Peptidase S24-like A3L04_01655 PF12802 MarR family A3L04_01660 PF01926 50S ribosome-binding GTPase A3L04_01670 PF06480 FtsH Extracellular A3L04_01670 PF01434 Peptidase family M41 A3L04_01670 PF17862 AAA+ lid domain A3L04_01670 PF00004 ATPase family associated with various cellular activities (AAA) A3L04_01675 PF03459 TOBE domain A3L04_01675 PF17912 MalK OB fold domain A3L04_01675 PF00005 ABC transporter A3L04_01680 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_01695 PF00155 Aminotransferase class I and II A3L04_01700 PF01008 Initiation factor 2 subunit family A3L04_01710 PF01978 Sugar-specific transcriptional regulator TrmB A3L04_01710 PF11495 Archaeal transcriptional regulator TrmB A3L04_01720 PF00271 Helicase conserved C-terminal domain A3L04_01720 PF17757 UvrB interaction domain A3L04_01720 PF04851 Type III restriction enzyme, res subunit A3L04_01720 PF12344 Ultra-violet resistance protein B A3L04_01720 PF02151 UvrB/uvrC motif A3L04_01725 PF17284 Spermidine synthase tetramerisation domain A3L04_01780 PF01921 tRNA synthetases class I (K) A3L04_01790 PF13649 Methyltransferase domain A3L04_01820 PF01112 Asparaginase A3L04_01825 PF07690 Major Facilitator Superfamily A3L04_01865 PF01259 SAICAR synthetase A3L04_01870 PF00156 Phosphoribosyl transferase domain A3L04_01885 PF01336 OB-fold nucleic acid binding domain A3L04_01885 PF00152 tRNA synthetases class II (D, K and N) A3L04_01900 PF01380 SIS domain A3L04_01915 PF01523 Putative modulator of DNA gyrase A3L04_01935 PF00266 Aminotransferase class-V A3L04_01950 PF02163 Peptidase family M50 A3L04_01950 PF13180 PDZ domain A3L04_01960 PF01189 16S rRNA methyltransferase RsmB/F A3L04_01960 PF01029 NusB family A3L04_01975 PF00814 Glycoprotease family A3L04_01980 PF07549 SecD/SecF GG Motif A3L04_01980 PF02355 Protein export membrane protein A3L04_01985 PF07549 SecD/SecF GG Motif A3L04_01985 PF02355 Protein export membrane protein A3L04_02000 PF01496 V-type ATPase 116kDa subunit family A3L04_02010 PF01991 ATP synthase (E/31 kDa) subunit A3L04_02025 PF16886 ATPsynthase alpha/beta subunit N-term extension A3L04_02025 PF02874 ATP synthase alpha/beta family, beta-barrel domain A3L04_02025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A3L04_02030 PF02874 ATP synthase alpha/beta family, beta-barrel domain A3L04_02030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A3L04_02035 PF01813 ATP synthase subunit D A3L04_02040 PF01613 Flavin reductase like domain A3L04_02040 PF00258 Flavodoxin A3L04_02045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A3L04_02045 PF08447 PAS fold A3L04_02045 PF13426 PAS domain A3L04_02050 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3L04_02050 PF01411 tRNA synthetases class II (A) A3L04_02050 PF02272 DHHA1 domain A3L04_02065 PF00970 Oxidoreductase FAD-binding domain A3L04_02065 PF00175 Oxidoreductase NAD-binding domain A3L04_02065 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A3L04_02070 PF01979 Amidohydrolase family A3L04_02080 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_02085 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_02085 PF12911 N-terminal TM domain of oligopeptide transport permease C A3L04_02090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_02090 PF00005 ABC transporter A3L04_02095 PF00005 ABC transporter A3L04_02095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_02105 PF06560 Glucose-6-phosphate isomerase (GPI) A3L04_02125 PF02769 AIR synthase related protein, C-terminal domain A3L04_02125 PF00586 AIR synthase related protein, N-terminal domain A3L04_02125 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A3L04_02135 PF01883 Iron-sulfur cluster assembly protein A3L04_02145 PF00764 Arginosuccinate synthase A3L04_02150 PF14698 Argininosuccinate lyase C-terminal A3L04_02150 PF00206 Lyase A3L04_02155 PF08443 RimK-like ATP-grasp domain A3L04_02180 PF00136 DNA polymerase family B A3L04_02180 PF03104 DNA polymerase family B, exonuclease domain A3L04_02185 PF00753 Metallo-beta-lactamase superfamily A3L04_02185 PF12706 Beta-lactamase superfamily domain A3L04_02195 PF03952 Enolase, N-terminal domain A3L04_02195 PF00113 Enolase, C-terminal TIM barrel domain A3L04_02215 PF01242 6-pyruvoyl tetrahydropterin synthase A3L04_02220 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A3L04_02245 PF01966 HD domain A3L04_02260 PF01022 Bacterial regulatory protein, arsR family A3L04_02285 PF00132 Bacterial transferase hexapeptide (six repeats) A3L04_02285 PF14602 Hexapeptide repeat of succinyl-transferase A3L04_02285 PF12804 MobA-like NTP transferase domain A3L04_02290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A3L04_02290 PF14572 Phosphoribosyl synthetase-associated domain A3L04_02325 PF01725 Ham1 family A3L04_02330 PF01037 Lrp/AsnC ligand binding domain A3L04_02335 PF10672 S-adenosylmethionine-dependent methyltransferase A3L04_02335 PF17785 PUA-like domain A3L04_02345 PF03600 Citrate transporter A3L04_02375 PF00575 S1 RNA binding domain A3L04_02380 PF00719 Inorganic pyrophosphatase A3L04_02390 PF01910 Thiamine-binding protein A3L04_02405 PF03176 MMPL family A3L04_02405 PF12823 Domain of unknown function (DUF3817) A3L04_02425 PF03129 Anticodon binding domain A3L04_02425 PF13393 Histidyl-tRNA synthetase A3L04_02430 PF00155 Aminotransferase class I and II A3L04_02445 PF00583 Acetyltransferase (GNAT) family A3L04_02455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3L04_02455 PF02272 DHHA1 domain A3L04_02455 PF01411 tRNA synthetases class II (A) A3L04_02475 PF09094 Domain of unknown function (DUF1925) A3L04_02475 PF09095 Domain of unknown function (DUF1926) A3L04_02475 PF03065 Glycosyl hydrolase family 57 A3L04_02500 PF01171 PP-loop family A3L04_02505 PF00999 Sodium/hydrogen exchanger family A3L04_02525 PF00708 Acylphosphatase A3L04_02535 PF00571 CBS domain A3L04_02535 PF00478 IMP dehydrogenase / GMP reductase domain A3L04_02540 PF01943 Polysaccharide biosynthesis protein A3L04_02560 PF01645 Conserved region in glutamate synthase A3L04_02560 PF13187 4Fe-4S dicluster domain A3L04_02565 PF00310 Glutamine amidotransferases class-II A3L04_02570 PF00285 Citrate synthase, C-terminal domain A3L04_02575 PF00180 Isocitrate/isopropylmalate dehydrogenase A3L04_02580 PF00330 Aconitase family (aconitate hydratase) A3L04_02580 PF00694 Aconitase C-terminal domain A3L04_02585 PF03853 YjeF-related protein N-terminus A3L04_02585 PF01256 Carbohydrate kinase A3L04_02590 PF00534 Glycosyl transferases group 1 A3L04_02590 PF13579 Glycosyl transferase 4-like domain A3L04_02600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A3L04_02600 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A3L04_02600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A3L04_02605 PF00483 Nucleotidyl transferase A3L04_02650 PF00535 Glycosyl transferase family 2 A3L04_02655 PF13439 Glycosyltransferase Family 4 A3L04_02655 PF00534 Glycosyl transferases group 1 A3L04_02665 PF00535 Glycosyl transferase family 2 A3L04_02670 PF00534 Glycosyl transferases group 1 A3L04_02670 PF13439 Glycosyltransferase Family 4 A3L04_02675 PF02224 Cytidylate kinase A3L04_02675 PF02569 Pantoate-beta-alanine ligase A3L04_02695 PF13439 Glycosyltransferase Family 4 A3L04_02700 PF00535 Glycosyl transferase family 2 A3L04_02765 PF01966 HD domain A3L04_02765 PF18211 Csm1 subunit domain B A3L04_02780 PF09620 CRISPR-associated protein (Cas_csx3) A3L04_02805 PF01145 SPFH domain / Band 7 family A3L04_02820 PF01699 Sodium/calcium exchanger protein A3L04_02830 PF01584 CheW-like domain A3L04_02835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A3L04_02835 PF00672 HAMP domain A3L04_02835 PF02743 Cache domain A3L04_02840 PF01739 CheR methyltransferase, SAM binding domain A3L04_02840 PF03705 CheR methyltransferase, all-alpha domain A3L04_02845 PF00072 Response regulator receiver domain A3L04_02850 PF01339 CheB methylesterase A3L04_02850 PF00072 Response regulator receiver domain A3L04_02855 PF01584 CheW-like domain A3L04_02855 PF02895 Signal transducing histidine kinase, homodimeric domain A3L04_02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3L04_02855 PF07194 P2 response regulator binding domain A3L04_02855 PF01627 Hpt domain A3L04_02860 PF04509 CheC-like family A3L04_02870 PF03975 CheD chemotactic sensory transduction A3L04_02875 PF02743 Cache domain A3L04_02875 PF00672 HAMP domain A3L04_02875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A3L04_02895 PF13660 Domain of unknown function (DUF4147) A3L04_02895 PF05161 MOFRL family A3L04_02905 PF02585 GlcNAc-PI de-N-acetylase A3L04_02920 PF00232 Glycosyl hydrolase family 1 A3L04_02925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A3L04_02930 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_02935 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_02935 PF12911 N-terminal TM domain of oligopeptide transport permease C A3L04_02940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_02940 PF00005 ABC transporter A3L04_02945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_02945 PF00005 ABC transporter A3L04_02950 PF00150 Cellulase (glycosyl hydrolase family 5) A3L04_02960 PF00005 ABC transporter A3L04_02965 PF01032 FecCD transport family A3L04_02970 PF01497 Periplasmic binding protein A3L04_02980 PF08704 tRNA methyltransferase complex GCD14 subunit A3L04_03020 PF00672 HAMP domain A3L04_03020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A3L04_03020 PF17200 Single Cache domain 2 A3L04_03030 PF00005 ABC transporter A3L04_03045 PF00294 pfkB family carbohydrate kinase A3L04_03050 PF00011 Hsp20/alpha crystallin family A3L04_03055 PF01434 Peptidase family M41 A3L04_03055 PF17862 AAA+ lid domain A3L04_03055 PF00004 ATPase family associated with various cellular activities (AAA) A3L04_03085 PF00586 AIR synthase related protein, N-terminal domain A3L04_03085 PF02769 AIR synthase related protein, C-terminal domain A3L04_03100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A3L04_03100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A3L04_03120 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase A3L04_03135 PF02899 Phage integrase, N-terminal SAM-like domain A3L04_03135 PF00589 Phage integrase family A3L04_03145 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) A3L04_03155 PF00398 Ribosomal RNA adenine dimethylase A3L04_03180 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_03185 PF00005 ABC transporter A3L04_03190 PF02386 Cation transport protein A3L04_03200 PF01967 MoaC family A3L04_03215 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_03215 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A3L04_03225 PF01554 MatE A3L04_03230 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A3L04_03240 PF01980 tRNA-methyltransferase O A3L04_03240 PF18389 TrmO C-terminal domain A3L04_03260 PF04172 LrgB-like family A3L04_03265 PF03788 LrgA family A3L04_03270 PF06470 SMC proteins Flexible Hinge Domain A3L04_03270 PF02463 RecF/RecN/SMC N terminal domain A3L04_03285 PF02616 Segregation and condensation protein ScpA A3L04_03305 PF06418 CTP synthase N-terminus A3L04_03305 PF00117 Glutamine amidotransferase class-I A3L04_03315 PF13380 CoA binding domain A3L04_03315 PF13607 Succinyl-CoA ligase like flavodoxin domain A3L04_03315 PF00583 Acetyltransferase (GNAT) family A3L04_03325 PF02568 Thiamine biosynthesis protein (ThiI) A3L04_03325 PF02926 THUMP domain A3L04_03340 PF02649 Type I GTP cyclohydrolase folE2 A3L04_03355 PF01966 HD domain A3L04_03365 PF00478 IMP dehydrogenase / GMP reductase domain A3L04_03365 PF00571 CBS domain A3L04_03375 PF00297 Ribosomal protein L3 A3L04_03380 PF00573 Ribosomal protein L4/L1 family A3L04_03385 PF00276 Ribosomal protein L23 A3L04_03390 PF00181 Ribosomal Proteins L2, RNA binding domain A3L04_03390 PF03947 Ribosomal Proteins L2, C-terminal domain A3L04_03395 PF00203 Ribosomal protein S19 A3L04_03400 PF00237 Ribosomal protein L22p/L17e A3L04_03405 PF07650 KH domain A3L04_03405 PF00189 Ribosomal protein S3, C-terminal domain A3L04_03410 PF00831 Ribosomal L29 protein A3L04_03425 PF00366 Ribosomal protein S17 A3L04_03430 PF00238 Ribosomal protein L14p/L23e A3L04_03435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A3L04_03435 PF00467 KOW motif A3L04_03445 PF00673 ribosomal L5P family C-terminus A3L04_03445 PF00281 Ribosomal protein L5 A3L04_03455 PF00410 Ribosomal protein S8 A3L04_03460 PF00347 Ribosomal protein L6 A3L04_03475 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A3L04_03480 PF03719 Ribosomal protein S5, C-terminal domain A3L04_03480 PF00333 Ribosomal protein S5, N-terminal domain A3L04_03490 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A3L04_03495 PF00344 SecY translocase A3L04_03510 PF01266 FAD dependent oxidoreductase A3L04_03525 PF17806 Sarcosine oxidase A3 domain A3L04_03525 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_03525 PF01571 Aminomethyltransferase folate-binding domain A3L04_03525 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3L04_03530 PF01381 Helix-turn-helix A3L04_03560 PF13419 Haloacid dehalogenase-like hydrolase A3L04_03565 PF01370 NAD dependent epimerase/dehydratase family A3L04_03570 PF13380 CoA binding domain A3L04_03570 PF00583 Acetyltransferase (GNAT) family A3L04_03570 PF13607 Succinyl-CoA ligase like flavodoxin domain A3L04_03620 PF01435 Peptidase family M48 A3L04_03640 PF13393 Histidyl-tRNA synthetase A3L04_03645 PF01634 ATP phosphoribosyltransferase A3L04_03650 PF00815 Histidinol dehydrogenase A3L04_03655 PF00475 Imidazoleglycerol-phosphate dehydratase A3L04_03670 PF00117 Glutamine amidotransferase class-I A3L04_03675 PF00977 Histidine biosynthesis protein A3L04_03680 PF00977 Histidine biosynthesis protein A3L04_03685 PF01502 Phosphoribosyl-AMP cyclohydrolase A3L04_03685 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase A3L04_03690 PF00155 Aminotransferase class I and II A3L04_03725 PF00892 EamA-like transporter family A3L04_03735 PF17827 PrmC N-terminal domain A3L04_03735 PF05175 Methyltransferase small domain A3L04_03765 PF00155 Aminotransferase class I and II A3L04_03775 PF00330 Aconitase family (aconitate hydratase) A3L04_03780 PF00694 Aconitase C-terminal domain A3L04_03785 PF00180 Isocitrate/isopropylmalate dehydrogenase A3L04_03795 PF08443 RimK-like ATP-grasp domain A3L04_03800 PF02774 Semialdehyde dehydrogenase, dimerisation domain A3L04_03800 PF01118 Semialdehyde dehydrogenase, NAD binding domain A3L04_03805 PF00696 Amino acid kinase family A3L04_03810 PF00202 Aminotransferase class-III A3L04_03815 PF01546 Peptidase family M20/M25/M40 A3L04_03825 PF00456 Transketolase, thiamine diphosphate binding domain A3L04_03830 PF02780 Transketolase, C-terminal domain A3L04_03830 PF02779 Transketolase, pyrimidine binding domain A3L04_03835 PF18152 DAHP synthase ferredoxin-like domain A3L04_03835 PF00793 DAHP synthetase I family A3L04_03840 PF01761 3-dehydroquinate synthase A3L04_03845 PF01487 Type I 3-dehydroquinase A3L04_03850 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A3L04_03850 PF01488 Shikimate / quinate 5-dehydrogenase A3L04_03850 PF08501 Shikimate dehydrogenase substrate binding domain A3L04_03855 PF00288 GHMP kinases N terminal domain A3L04_03855 PF08544 GHMP kinases C terminal A3L04_03870 PF02653 Branched-chain amino acid transport system / permease component A3L04_03880 PF00107 Zinc-binding dehydrogenase A3L04_03880 PF08240 Alcohol dehydrogenase GroES-like domain A3L04_03895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A3L04_03900 PF01264 Chorismate synthase A3L04_03905 PF02153 Prephenate dehydrogenase A3L04_03905 PF01817 Chorismate mutase type II A3L04_03910 PF00155 Aminotransferase class I and II A3L04_03925 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_03935 PF00117 Glutamine amidotransferase class-I A3L04_03935 PF02885 Glycosyl transferase family, helical bundle domain A3L04_03935 PF00591 Glycosyl transferase family, a/b domain A3L04_03940 PF00425 chorismate binding enzyme A3L04_03940 PF04715 Anthranilate synthase component I, N terminal region A3L04_03945 PF02885 Glycosyl transferase family, helical bundle domain A3L04_03945 PF00591 Glycosyl transferase family, a/b domain A3L04_03950 PF00218 Indole-3-glycerol phosphate synthase A3L04_03960 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A3L04_03960 PF00117 Glutamine amidotransferase class-I A3L04_03965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A3L04_03965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A3L04_03965 PF02142 MGS-like domain A3L04_03970 PF14748 Pyrroline-5-carboxylate reductase dimerisation A3L04_03970 PF03807 NADP oxidoreductase coenzyme F420-dependent A3L04_03980 PF09107 Elongation factor SelB, winged helix A3L04_03980 PF09106 Elongation factor SelB, winged helix A3L04_03980 PF09105 Elongation factor SelB, winged helix A3L04_03980 PF03144 Elongation factor Tu domain 2 A3L04_03980 PF00009 Elongation factor Tu GTP binding domain A3L04_03990 PF01965 DJ-1/PfpI family A3L04_04010 PF02310 B12 binding domain A3L04_04010 PF04055 Radical SAM superfamily A3L04_04025 PF00483 Nucleotidyl transferase A3L04_04035 PF02223 Thymidylate kinase A3L04_04040 PF00448 SRP54-type protein, GTPase domain A3L04_04040 PF02881 SRP54-type protein, helical bundle domain A3L04_04040 PF02978 Signal peptide binding domain A3L04_04055 PF01037 Lrp/AsnC ligand binding domain A3L04_04060 PF00156 Phosphoribosyl transferase domain A3L04_04080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A3L04_04080 PF00749 tRNA synthetases class I (E and Q), catalytic domain A3L04_04080 PF02637 GatB domain A3L04_04090 PF03600 Citrate transporter A3L04_04115 PF05681 Fumarate hydratase (Fumerase) A3L04_04125 PF00106 short chain dehydrogenase A3L04_04140 PF01906 Putative heavy-metal-binding A3L04_04160 PF01470 Pyroglutamyl peptidase A3L04_04170 PF01171 PP-loop family A3L04_04200 PF01926 50S ribosome-binding GTPase A3L04_04200 PF01018 GTP1/OBG A3L04_04200 PF09269 Domain of unknown function (DUF1967) A3L04_04210 PF02594 Uncharacterised ACR, YggU family COG1872 A3L04_04215 PF02881 SRP54-type protein, helical bundle domain A3L04_04215 PF00448 SRP54-type protein, GTPase domain A3L04_04225 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A3L04_04225 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A3L04_04225 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A3L04_04230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A3L04_04240 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A3L04_04240 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A3L04_04240 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A3L04_04245 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A3L04_04255 PF01497 Periplasmic binding protein A3L04_04275 PF00464 Serine hydroxymethyltransferase A3L04_04280 PF08402 TOBE domain A3L04_04280 PF00005 ABC transporter A3L04_04290 PF01351 Ribonuclease HII A3L04_04300 PF03454 MoeA C-terminal region (domain IV) A3L04_04300 PF00994 Probable molybdopterin binding domain A3L04_04300 PF03453 MoeA N-terminal region (domain I and II) A3L04_04310 PF01509 TruB family pseudouridylate synthase (N terminal domain) A3L04_04310 PF16198 tRNA pseudouridylate synthase B C-terminal domain A3L04_04330 PF05175 Methyltransferase small domain A3L04_04340 PF00416 Ribosomal protein S13/S18 A3L04_04345 PF01479 S4 domain A3L04_04345 PF00163 Ribosomal protein S4/S9 N-terminal domain A3L04_04350 PF00411 Ribosomal protein S11 A3L04_04370 PF00572 Ribosomal protein L13 A3L04_04375 PF00380 Ribosomal protein S9/S16 A3L04_04395 PF00113 Enolase, C-terminal TIM barrel domain A3L04_04395 PF03952 Enolase, N-terminal domain A3L04_04400 PF00318 Ribosomal protein S2 A3L04_04405 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_04410 PF01875 Memo-like protein A3L04_04415 PF10509 Galactokinase galactose-binding signature A3L04_04415 PF08544 GHMP kinases C terminal A3L04_04415 PF00288 GHMP kinases N terminal domain A3L04_04420 PF00696 Amino acid kinase family A3L04_04425 PF01068 ATP dependent DNA ligase domain A3L04_04425 PF04679 ATP dependent DNA ligase C terminal region A3L04_04425 PF04675 DNA ligase N terminus A3L04_04450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A3L04_04450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A3L04_04450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A3L04_04455 PF02350 UDP-N-acetylglucosamine 2-epimerase A3L04_04475 PF04055 Radical SAM superfamily A3L04_04475 PF06463 Molybdenum Cofactor Synthesis C A3L04_04480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3L04_04480 PF03129 Anticodon binding domain A3L04_04505 PF00753 Metallo-beta-lactamase superfamily A3L04_04505 PF12706 Beta-lactamase superfamily domain A3L04_04520 PF01139 tRNA-splicing ligase RtcB A3L04_04520 PF01139 tRNA-splicing ligase RtcB A3L04_04540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A3L04_04550 PF00591 Glycosyl transferase family, a/b domain A3L04_04550 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A3L04_04550 PF02885 Glycosyl transferase family, helical bundle domain A3L04_04555 PF00535 Glycosyl transferase family 2 A3L04_04570 PF00999 Sodium/hydrogen exchanger family A3L04_04575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A3L04_04575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A3L04_04580 PF01037 Lrp/AsnC ligand binding domain A3L04_04590 PF01255 Putative undecaprenyl diphosphate synthase A3L04_04595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A3L04_04600 PF01435 Peptidase family M48 A3L04_04615 PF00535 Glycosyl transferase family 2 A3L04_04625 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_04640 PF10609 NUBPL iron-transfer P-loop NTPase A3L04_04645 PF00293 NUDIX domain A3L04_04645 PF13344 Haloacid dehalogenase-like hydrolase A3L04_04665 PF02769 AIR synthase related protein, C-terminal domain A3L04_04665 PF00586 AIR synthase related protein, N-terminal domain A3L04_04670 PF01594 AI-2E family transporter A3L04_04680 PF01343 Peptidase family S49 A3L04_04700 PF00512 His Kinase A (phospho-acceptor) domain A3L04_04700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A3L04_04700 PF00672 HAMP domain A3L04_04730 PF01523 Putative modulator of DNA gyrase A3L04_04750 PF00227 Proteasome subunit A3L04_04765 PF00013 KH domain A3L04_04765 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A3L04_04765 PF01138 3' exoribonuclease family, domain 1 A3L04_04765 PF03725 3' exoribonuclease family, domain 2 A3L04_04765 PF00575 S1 RNA binding domain A3L04_04770 PF01138 3' exoribonuclease family, domain 1 A3L04_04770 PF03725 3' exoribonuclease family, domain 2 A3L04_04800 PF10385 RNA polymerase beta subunit external 1 domain A3L04_04800 PF04560 RNA polymerase Rpb2, domain 7 A3L04_04800 PF04565 RNA polymerase Rpb2, domain 3 A3L04_04800 PF04561 RNA polymerase Rpb2, domain 2 A3L04_04800 PF04563 RNA polymerase beta subunit A3L04_04800 PF00562 RNA polymerase Rpb2, domain 6 A3L04_04805 PF05000 RNA polymerase Rpb1, domain 4 A3L04_04805 PF04983 RNA polymerase Rpb1, domain 3 A3L04_04805 PF00623 RNA polymerase Rpb1, domain 2 A3L04_04805 PF04997 RNA polymerase Rpb1, domain 1 A3L04_04805 PF04998 RNA polymerase Rpb1, domain 5 A3L04_04810 PF04983 RNA polymerase Rpb1, domain 3 A3L04_04810 PF00623 RNA polymerase Rpb1, domain 2 A3L04_04810 PF04997 RNA polymerase Rpb1, domain 1 A3L04_04810 PF04998 RNA polymerase Rpb1, domain 5 A3L04_04810 PF05000 RNA polymerase Rpb1, domain 4 A3L04_04830 PF00177 Ribosomal protein S7p/S5e A3L04_04845 PF01142 tRNA pseudouridine synthase D (TruD) A3L04_04855 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A3L04_04855 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A3L04_04855 PF01189 16S rRNA methyltransferase RsmB/F A3L04_04900 PF00881 Nitroreductase family A3L04_04930 PF01381 Helix-turn-helix A3L04_04940 PF00005 ABC transporter A3L04_04955 PF01137 RNA 3'-terminal phosphate cyclase A3L04_04955 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain A3L04_04995 PF01037 Lrp/AsnC ligand binding domain A3L04_04995 PF13404 AsnC-type helix-turn-helix domain A3L04_05015 PF01180 Dihydroorotate dehydrogenase A3L04_05020 PF01979 Amidohydrolase family A3L04_05030 PF16193 AAA C-terminal domain A3L04_05030 PF01661 Macro domain A3L04_05030 PF12002 MgsA AAA+ ATPase C terminal A3L04_05030 PF05496 Holliday junction DNA helicase RuvB P-loop domain A3L04_05035 PF11897 Protein of unknown function (DUF3417) A3L04_05035 PF00343 Carbohydrate phosphorylase A3L04_05040 PF16200 C-terminal region of band_7 A3L04_05040 PF01145 SPFH domain / Band 7 family A3L04_05050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A3L04_05050 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_05055 PF01880 Desulfoferrodoxin A3L04_05060 PF00301 Rubredoxin A3L04_05070 PF06745 KaiC A3L04_05085 PF00753 Metallo-beta-lactamase superfamily A3L04_05085 PF00258 Flavodoxin A3L04_05090 PF00106 short chain dehydrogenase A3L04_05100 PF01964 Radical SAM ThiC family A3L04_05105 PF09383 NIL domain A3L04_05105 PF00005 ABC transporter A3L04_05120 PF02086 D12 class N6 adenine-specific DNA methyltransferase A3L04_05135 PF13732 Domain of unknown function (DUF4162) A3L04_05135 PF00005 ABC transporter A3L04_05160 PF01869 BadF/BadG/BcrA/BcrD ATPase family A3L04_05170 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_05170 PF12911 N-terminal TM domain of oligopeptide transport permease C A3L04_05175 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_05180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A3L04_05185 PF01380 SIS domain A3L04_05195 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal A3L04_05195 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal A3L04_05210 PF13580 SIS domain A3L04_05215 PF01979 Amidohydrolase family A3L04_05225 PF10518 TAT (twin-arginine translocation) pathway signal sequence A3L04_05225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A3L04_05255 PF09334 tRNA synthetases class I (M) A3L04_05255 PF08264 Anticodon-binding domain of tRNA A3L04_05255 PF01588 Putative tRNA binding domain A3L04_05260 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A3L04_05260 PF00970 Oxidoreductase FAD-binding domain A3L04_05260 PF00175 Oxidoreductase NAD-binding domain A3L04_05265 PF13247 4Fe-4S dicluster domain A3L04_05265 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_05265 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A3L04_05295 PF00578 AhpC/TSA family A3L04_05295 PF10417 C-terminal domain of 1-Cys peroxiredoxin A3L04_05315 PF00005 ABC transporter A3L04_05325 PF00753 Metallo-beta-lactamase superfamily A3L04_05335 PF05901 Excalibur calcium-binding domain A3L04_05335 PF00565 Staphylococcal nuclease homologue A3L04_05345 PF13173 AAA domain A3L04_05345 PF13635 Domain of unknown function (DUF4143) A3L04_05360 PF08463 EcoEI R protein C-terminal A3L04_05360 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) A3L04_05360 PF04851 Type III restriction enzyme, res subunit A3L04_05360 PF00271 Helicase conserved C-terminal domain A3L04_05365 PF12161 HsdM N-terminal domain A3L04_05365 PF02384 N-6 DNA Methylase A3L04_05370 PF01420 Type I restriction modification DNA specificity domain A3L04_05385 PF07687 Peptidase dimerisation domain A3L04_05385 PF01546 Peptidase family M20/M25/M40 A3L04_05405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3L04_05405 PF03129 Anticodon binding domain A3L04_05405 PF09180 Prolyl-tRNA synthetase, C-terminal A3L04_05420 PF09369 Domain of unknown function (DUF1998) A3L04_05420 PF00271 Helicase conserved C-terminal domain A3L04_05420 PF00270 DEAD/DEAH box helicase A3L04_05435 PF01230 HIT domain A3L04_05445 PF00857 Isochorismatase family A3L04_05450 PF00742 Homoserine dehydrogenase A3L04_05450 PF03447 Homoserine dehydrogenase, NAD binding domain A3L04_05450 PF00696 Amino acid kinase family A3L04_05455 PF01513 ATP-NAD kinase A3L04_05470 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A3L04_05470 PF00753 Metallo-beta-lactamase superfamily A3L04_05470 PF17770 Ribonuclease J C-terminal domain A3L04_05475 PF01545 Cation efflux family A3L04_05485 PF02535 ZIP Zinc transporter A3L04_05495 PF08264 Anticodon-binding domain of tRNA A3L04_05495 PF00133 tRNA synthetases class I (I, L, M and V) A3L04_05580 PF02626 Carboxyltransferase domain, subdomain A and B A3L04_05585 PF02682 Carboxyltransferase domain, subdomain C and D A3L04_05590 PF01850 PIN domain A3L04_05595 PF03746 LamB/YcsF family A3L04_05600 PF13635 Domain of unknown function (DUF4143) A3L04_05600 PF13173 AAA domain A3L04_05620 PF00005 ABC transporter A3L04_05650 PF00005 ABC transporter A3L04_05655 PF01032 FecCD transport family A3L04_05695 PF00005 ABC transporter A3L04_05715 PF01416 tRNA pseudouridine synthase A3L04_05725 PF01588 Putative tRNA binding domain A3L04_05725 PF09334 tRNA synthetases class I (M) A3L04_05725 PF08264 Anticodon-binding domain of tRNA A3L04_05735 PF13722 5TM C-terminal transporter carbon starvation CstA A3L04_05735 PF02554 Carbon starvation protein CstA A3L04_05745 PF17886 HSP20-like domain found in ArsA A3L04_05745 PF02374 Anion-transporting ATPase A3L04_05760 PF00334 Nucleoside diphosphate kinase A3L04_05770 PF04851 Type III restriction enzyme, res subunit A3L04_05770 PF13307 Helicase C-terminal domain A3L04_05780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A3L04_05780 PF00205 Thiamine pyrophosphate enzyme, central domain A3L04_05780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A3L04_05785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A3L04_05785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A3L04_05790 PF00682 HMGL-like A3L04_05790 PF08502 LeuA allosteric (dimerisation) domain A3L04_05795 PF00330 Aconitase family (aconitate hydratase) A3L04_05800 PF00694 Aconitase C-terminal domain A3L04_05805 PF00180 Isocitrate/isopropylmalate dehydrogenase A3L04_05810 PF00682 HMGL-like A3L04_05810 PF08502 LeuA allosteric (dimerisation) domain A3L04_05845 PF00654 Voltage gated chloride channel A3L04_05850 PF06480 FtsH Extracellular A3L04_05850 PF01434 Peptidase family M41 A3L04_05850 PF00004 ATPase family associated with various cellular activities (AAA) A3L04_05850 PF17862 AAA+ lid domain A3L04_05860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A3L04_05865 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A3L04_05865 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A3L04_05875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A3L04_05880 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A3L04_05880 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A3L04_05895 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A3L04_05895 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A3L04_05900 PF00108 Thiolase, N-terminal domain A3L04_05900 PF02803 Thiolase, C-terminal domain A3L04_05920 PF03956 Lysine exporter LysO A3L04_05930 PF01923 Cobalamin adenosyltransferase A3L04_05935 PF01177 Asp/Glu/Hydantoin racemase A3L04_05945 PF07690 Major Facilitator Superfamily A3L04_05985 PF01409 tRNA synthetases class II core domain (F) A3L04_05990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A3L04_05990 PF03484 tRNA synthetase B5 domain A3L04_05995 PF00107 Zinc-binding dehydrogenase A3L04_05995 PF08240 Alcohol dehydrogenase GroES-like domain A3L04_06010 PF00437 Type II/IV secretion system protein A3L04_06030 PF01926 50S ribosome-binding GTPase A3L04_06035 PF10672 S-adenosylmethionine-dependent methyltransferase A3L04_06035 PF01170 Putative RNA methylase family UPF0020 A3L04_06035 PF02926 THUMP domain A3L04_06045 PF01557 Fumarylacetoacetate (FAA) hydrolase family A3L04_06050 PF00795 Carbon-nitrogen hydrolase A3L04_06065 PF01384 Phosphate transporter family A3L04_06070 PF01865 Protein of unknown function DUF47 A3L04_06080 PF01406 tRNA synthetases class I (C) catalytic domain A3L04_06080 PF09190 DALR domain A3L04_06090 PF04055 Radical SAM superfamily A3L04_06115 PF02887 Pyruvate kinase, alpha/beta domain A3L04_06115 PF00224 Pyruvate kinase, barrel domain A3L04_06125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A3L04_06125 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_06130 PF01554 MatE A3L04_06135 PF01554 MatE A3L04_06140 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3L04_06140 PF02272 DHHA1 domain A3L04_06140 PF01411 tRNA synthetases class II (A) A3L04_06165 PF01894 Uncharacterised protein family UPF0047 A3L04_06175 PF03453 MoeA N-terminal region (domain I and II) A3L04_06175 PF03454 MoeA C-terminal region (domain IV) A3L04_06175 PF00994 Probable molybdopterin binding domain A3L04_06190 PF00557 Metallopeptidase family M24 A3L04_06200 PF10609 NUBPL iron-transfer P-loop NTPase A3L04_06215 PF02146 Sir2 family A3L04_06220 PF01899 Na+/H+ ion antiporter subunit A3L04_06225 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A3L04_06235 PF00361 Proton-conducting membrane transporter A3L04_06235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A3L04_06235 PF13244 Domain of unknown function (DUF4040) A3L04_06250 PF00361 Proton-conducting membrane transporter A3L04_06260 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain A3L04_06260 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain A3L04_06275 PF00282 Pyridoxal-dependent decarboxylase conserved domain A3L04_06295 PF00999 Sodium/hydrogen exchanger family A3L04_06295 PF02254 TrkA-N domain A3L04_06305 PF00149 Calcineurin-like phosphoesterase A3L04_06310 PF02463 RecF/RecN/SMC N terminal domain A3L04_06475 PF05958 tRNA (Uracil-5-)-methyltransferase A3L04_06475 PF01938 TRAM domain A3L04_06480 PF01008 Initiation factor 2 subunit family A3L04_06480 PF03061 Thioesterase superfamily A3L04_06490 PF01209 ubiE/COQ5 methyltransferase family A3L04_06500 PF13167 GTP-binding GTPase N-terminal A3L04_06500 PF01926 50S ribosome-binding GTPase A3L04_06500 PF16360 GTP-binding GTPase Middle Region A3L04_06505 PF01384 Phosphate transporter family A3L04_06530 PF00682 HMGL-like A3L04_06530 PF00364 Biotin-requiring enzyme A3L04_06530 PF02436 Conserved carboxylase domain A3L04_06540 PF01546 Peptidase family M20/M25/M40 A3L04_06540 PF07687 Peptidase dimerisation domain A3L04_06545 PF08543 Phosphomethylpyrimidine kinase A3L04_06550 PF02581 Thiamine monophosphate synthase A3L04_06555 PF02110 Hydroxyethylthiazole kinase family A3L04_06560 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin A3L04_06570 PF03070 TENA/THI-4/PQQC family A3L04_06575 PF01161 Phosphatidylethanolamine-binding protein A3L04_06590 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3L04_06590 PF01571 Aminomethyltransferase folate-binding domain A3L04_06600 PF00557 Metallopeptidase family M24 A3L04_06600 PF01321 Creatinase/Prolidase N-terminal domain A3L04_06605 PF17645 Arylmalonate decarboxylase A3L04_06610 PF00753 Metallo-beta-lactamase superfamily A3L04_06610 PF12706 Beta-lactamase superfamily domain A3L04_06630 PF00156 Phosphoribosyl transferase domain A3L04_06655 PF01884 PcrB family A3L04_06690 PF05191 Adenylate kinase, active site lid A3L04_06695 PF01702 Queuine tRNA-ribosyltransferase A3L04_06720 PF00271 Helicase conserved C-terminal domain A3L04_06720 PF00270 DEAD/DEAH box helicase A3L04_06720 PF08494 DEAD/H associated A3L04_06730 PF13380 CoA binding domain A3L04_06745 PF01008 Initiation factor 2 subunit family A3L04_06755 PF07690 Major Facilitator Superfamily A3L04_06760 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3L04_06760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3L04_06760 PF03129 Anticodon binding domain A3L04_06760 PF02824 TGS domain A3L04_06785 PF02403 Seryl-tRNA synthetase N-terminal domain A3L04_06785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A3L04_06790 PF01434 Peptidase family M41 A3L04_06790 PF00004 ATPase family associated with various cellular activities (AAA) A3L04_06790 PF17862 AAA+ lid domain A3L04_06795 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain A3L04_06795 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 A3L04_06820 PF00850 Histone deacetylase domain A3L04_06845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain A3L04_06845 PF00326 Prolyl oligopeptidase family A3L04_06855 PF07690 Major Facilitator Superfamily A3L04_06880 PF01938 TRAM domain A3L04_06880 PF05958 tRNA (Uracil-5-)-methyltransferase A3L04_06930 PF01209 ubiE/COQ5 methyltransferase family A3L04_06940 PF01458 Uncharacterized protein family (UPF0051) A3L04_06945 PF00005 ABC transporter A3L04_06960 PF12706 Beta-lactamase superfamily domain A3L04_06995 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) A3L04_07000 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF A3L04_07000 PF01189 16S rRNA methyltransferase RsmB/F A3L04_07000 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF A3L04_07030 PF00005 ABC transporter A3L04_07040 PF01571 Aminomethyltransferase folate-binding domain A3L04_07040 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3L04_07040 PF16350 FAD dependent oxidoreductase central domain A3L04_07040 PF01266 FAD dependent oxidoreductase A3L04_07045 PF08669 Glycine cleavage T-protein C-terminal barrel domain A3L04_07045 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_07045 PF17806 Sarcosine oxidase A3 domain A3L04_07045 PF01571 Aminomethyltransferase folate-binding domain A3L04_07050 PF00474 Sodium:solute symporter family A3L04_07070 PF00384 Molybdopterin oxidoreductase A3L04_07070 PF01568 Molydopterin dinucleotide binding domain A3L04_07070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A3L04_07080 PF00860 Permease family A3L04_07100 PF01680 SOR/SNZ family A3L04_07105 PF01174 SNO glutamine amidotransferase family A3L04_07120 PF01568 Molydopterin dinucleotide binding domain A3L04_07120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A3L04_07120 PF00384 Molybdopterin oxidoreductase A3L04_07130 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_07160 PF02540 NAD synthase A3L04_07160 PF00958 GMP synthase C terminal domain A3L04_07160 PF00117 Glutamine amidotransferase class-I A3L04_07175 PF00958 GMP synthase C terminal domain A3L04_07175 PF00117 Glutamine amidotransferase class-I A3L04_07175 PF02540 NAD synthase A3L04_07225 PF00091 Tubulin/FtsZ family, GTPase domain A3L04_07225 PF12327 FtsZ family, C-terminal domain A3L04_07240 PF00270 DEAD/DEAH box helicase A3L04_07240 PF00271 Helicase conserved C-terminal domain A3L04_07240 PF08494 DEAD/H associated A3L04_07315 PF01018 GTP1/OBG A3L04_07315 PF01926 50S ribosome-binding GTPase A3L04_07330 PF01597 Glycine cleavage H-protein A3L04_07355 PF02926 THUMP domain A3L04_07355 PF02568 Thiamine biosynthesis protein (ThiI) A3L04_07410 PF00266 Aminotransferase class-V A3L04_07425 PF00375 Sodium:dicarboxylate symporter family A3L04_07430 PF18277 AbrB C-terminal domain A3L04_07430 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin A3L04_07440 PF02934 GatB/GatE catalytic domain A3L04_07440 PF02637 GatB domain A3L04_07445 PF00710 Asparaginase, N-terminal A3L04_07445 PF17763 Glutaminase/Asparaginase C-terminal domain A3L04_07460 PF00294 pfkB family carbohydrate kinase A3L04_07470 PF04055 Radical SAM superfamily A3L04_07470 PF06463 Molybdenum Cofactor Synthesis C A3L04_07475 PF01899 Na+/H+ ion antiporter subunit A3L04_07480 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A3L04_07495 PF00361 Proton-conducting membrane transporter A3L04_07495 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter A3L04_07495 PF13244 Domain of unknown function (DUF4040) A3L04_07495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A3L04_07500 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A3L04_07505 PF00361 Proton-conducting membrane transporter A3L04_07515 PF00146 NADH dehydrogenase A3L04_07520 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A3L04_07525 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A3L04_07530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A3L04_07540 PF02441 Flavoprotein A3L04_07540 PF04127 DNA / pantothenate metabolism flavoprotein A3L04_07565 PF00146 NADH dehydrogenase A3L04_07570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A3L04_07570 PF00374 Nickel-dependent hydrogenase A3L04_07575 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A3L04_07575 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A3L04_07575 PF00374 Nickel-dependent hydrogenase A3L04_07580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A3L04_07590 PF00361 Proton-conducting membrane transporter A3L04_07615 PF03334 Na+/H+ antiporter subunit A3L04_07620 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A3L04_07625 PF01899 Na+/H+ ion antiporter subunit A3L04_07630 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_07635 PF00202 Aminotransferase class-III A3L04_07660 PF05958 tRNA (Uracil-5-)-methyltransferase A3L04_07660 PF01938 TRAM domain A3L04_07675 PF00005 ABC transporter A3L04_07675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_07680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_07680 PF00005 ABC transporter A3L04_07690 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_07695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A3L04_07700 PF00696 Amino acid kinase family A3L04_07705 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_07710 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A3L04_07710 PF10996 Beta-Casp domain A3L04_07710 PF00753 Metallo-beta-lactamase superfamily A3L04_07715 PF00227 Proteasome subunit A3L04_07730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A3L04_07755 PF02558 Ketopantoate reductase PanE/ApbA A3L04_07755 PF08546 Ketopantoate reductase PanE/ApbA C terminal A3L04_07765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3L04_07765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3L04_07770 PF09210 Domain of unknown function (DUF1957) A3L04_07770 PF03065 Glycosyl hydrolase family 57 A3L04_07790 PF04055 Radical SAM superfamily A3L04_07815 PF03167 Uracil DNA glycosylase superfamily A3L04_07835 PF13685 Iron-containing alcohol dehydrogenase A3L04_07845 PF03485 Arginyl tRNA synthetase N terminal domain A3L04_07845 PF05746 DALR anticodon binding domain A3L04_07845 PF00750 tRNA synthetases class I (R) A3L04_07870 PF00338 Ribosomal protein S10p/S20e A3L04_07875 PF00009 Elongation factor Tu GTP binding domain A3L04_07875 PF03144 Elongation factor Tu domain 2 A3L04_07875 PF03143 Elongation factor Tu C-terminal domain A3L04_07880 PF03099 Biotin/lipoate A/B protein ligase family A3L04_07885 PF01545 Cation efflux family A3L04_07885 PF16916 Dimerisation domain of Zinc Transporter A3L04_07925 PF01694 Rhomboid family A3L04_07935 PF00633 Helix-hairpin-helix motif A3L04_07935 PF00730 HhH-GPD superfamily base excision DNA repair protein A3L04_07935 PF10576 Iron-sulfur binding domain of endonuclease III A3L04_07945 PF08220 DeoR-like helix-turn-helix domain A3L04_07945 PF00455 DeoR C terminal sensor domain A3L04_07950 PF00202 Aminotransferase class-III A3L04_07955 PF00704 Glycosyl hydrolases family 18 A3L04_07955 PF00041 Fibronectin type III domain A3L04_07965 PF10609 NUBPL iron-transfer P-loop NTPase A3L04_07970 PF01883 Iron-sulfur cluster assembly protein A3L04_07970 PF10609 NUBPL iron-transfer P-loop NTPase A3L04_07975 PF01926 50S ribosome-binding GTPase A3L04_07975 PF04055 Radical SAM superfamily A3L04_07975 PF01018 GTP1/OBG A3L04_08000 PF00440 Bacterial regulatory proteins, tetR family A3L04_08000 PF17934 Tetracyclin repressor-like, C-terminal domain A3L04_08005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A3L04_08005 PF00384 Molybdopterin oxidoreductase A3L04_08005 PF01568 Molydopterin dinucleotide binding domain A3L04_08010 PF13247 4Fe-4S dicluster domain A3L04_08010 PF12800 4Fe-4S binding domain A3L04_08015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A3L04_08015 PF00361 Proton-conducting membrane transporter A3L04_08020 PF00361 Proton-conducting membrane transporter A3L04_08025 PF00146 NADH dehydrogenase A3L04_08030 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A3L04_08030 PF00374 Nickel-dependent hydrogenase A3L04_08030 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A3L04_08035 PF12838 4Fe-4S dicluster domain A3L04_08040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A3L04_08050 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) A3L04_08070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A3L04_08080 PF00361 Proton-conducting membrane transporter A3L04_08090 PF12804 MobA-like NTP transferase domain A3L04_08100 PF03063 Prismane/CO dehydrogenase family A3L04_08125 PF02915 Rubrerythrin A3L04_08145 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A3L04_08155 PF00013 KH domain A3L04_08155 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A3L04_08155 PF01138 3' exoribonuclease family, domain 1 A3L04_08155 PF03725 3' exoribonuclease family, domain 2 A3L04_08155 PF00575 S1 RNA binding domain A3L04_08185 PF00753 Metallo-beta-lactamase superfamily A3L04_08185 PF16123 Hydroxyacylglutathione hydrolase C-terminus A3L04_08195 PF02548 Ketopantoate hydroxymethyltransferase A3L04_08240 PF01523 Putative modulator of DNA gyrase A3L04_08245 PF01523 Putative modulator of DNA gyrase A3L04_08275 PF00733 Asparagine synthase A3L04_08275 PF13537 Glutamine amidotransferase domain A3L04_08290 PF00005 ABC transporter A3L04_08290 PF00664 ABC transporter transmembrane region A3L04_08295 PF00005 ABC transporter A3L04_08295 PF00664 ABC transporter transmembrane region A3L04_08310 PF00266 Aminotransferase class-V A3L04_08315 PF01784 NIF3 (NGG1p interacting factor 3) A3L04_08330 PF05958 tRNA (Uracil-5-)-methyltransferase A3L04_08330 PF01938 TRAM domain A3L04_08330 PF02475 Met-10+ like-protein A3L04_08340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle A3L04_08350 PF12911 N-terminal TM domain of oligopeptide transport permease C A3L04_08350 PF00528 Binding-protein-dependent transport system inner membrane component A3L04_08355 PF00005 ABC transporter A3L04_08355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_08360 PF00005 ABC transporter A3L04_08360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region A3L04_08375 PF18096 THUMP domain-like A3L04_08380 PF00483 Nucleotidyl transferase A3L04_08380 PF01066 CDP-alcohol phosphatidyltransferase A3L04_08390 PF00162 Phosphoglycerate kinase A3L04_08400 PF02774 Semialdehyde dehydrogenase, dimerisation domain A3L04_08400 PF01118 Semialdehyde dehydrogenase, NAD binding domain A3L04_08405 PF00291 Pyridoxal-phosphate dependent enzyme A3L04_08410 PF00288 GHMP kinases N terminal domain A3L04_08410 PF08544 GHMP kinases C terminal A3L04_08415 PF13840 ACT domain A3L04_08415 PF01842 ACT domain A3L04_08415 PF00696 Amino acid kinase family A3L04_08415 PF03447 Homoserine dehydrogenase, NAD binding domain A3L04_08415 PF00742 Homoserine dehydrogenase A3L04_08420 PF03447 Homoserine dehydrogenase, NAD binding domain A3L04_08420 PF00696 Amino acid kinase family A3L04_08420 PF00742 Homoserine dehydrogenase A3L04_08425 PF00557 Metallopeptidase family M24 A3L04_08425 PF01321 Creatinase/Prolidase N-terminal domain A3L04_08435 PF10369 Small subunit of acetolactate synthase A3L04_08485 PF07728 AAA domain (dynein-related subfamily) A3L04_08485 PF12102 Domain of unknown function (DUF3578) A3L04_08490 PF00176 SNF2 family N-terminal domain A3L04_08490 PF00271 Helicase conserved C-terminal domain A3L04_08550 PF00149 Calcineurin-like phosphoesterase A3L04_08550 PF12320 Type 5 capsule protein repressor C-terminal domain A3L04_08555 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system A3L04_08560 PF00005 ABC transporter A3L04_08560 PF12848 ABC transporter A3L04_08575 PF07992 Pyridine nucleotide-disulphide oxidoreductase A3L04_08575 PF13247 4Fe-4S dicluster domain A3L04_08575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A3L04_08580 PF00175 Oxidoreductase NAD-binding domain A3L04_08580 PF00970 Oxidoreductase FAD-binding domain A3L04_08580 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A3L04_08590 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A3L04_08600 PF00374 Nickel-dependent hydrogenase A3L04_08620 PF01455 HupF/HypC family A3L04_08625 PF01924 Hydrogenase formation hypA family A3L04_08630 PF04055 Radical SAM superfamily A3L04_08630 PF06463 Molybdenum Cofactor Synthesis C A3L04_08635 PF00708 Acylphosphatase A3L04_08635 PF17788 HypF Kae1-like domain A3L04_08635 PF01300 Telomere recombination A3L04_08635 PF07503 HypF finger A3L04_08650 PF13087 AAA domain A3L04_08650 PF13086 AAA domain A3L04_08650 PF13195 Protein of unknown function (DUF4011) A3L04_08675 PF01551 Peptidase family M23 A3L04_08680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A3L04_08680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A3L04_08680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A3L04_08680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A3L04_08685 PF00483 Nucleotidyl transferase A3L04_08685 PF01050 Mannose-6-phosphate isomerase A3L04_08710 PF06968 Biotin and Thiamin Synthesis associated domain A3L04_08710 PF04055 Radical SAM superfamily A3L04_08725 PF02441 Flavoprotein A3L04_08730 PF13404 AsnC-type helix-turn-helix domain A3L04_08730 PF01037 Lrp/AsnC ligand binding domain A3L04_08755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A3L04_08755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A3L04_08755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A3L04_08755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A3L04_08760 PF03437 BtpA family A3L04_08765 PF01026 TatD related DNase A3L04_08775 PF07670 Nucleoside recognition A3L04_08775 PF07664 Ferrous iron transport protein B C terminus A3L04_08775 PF17910 FeoB cytosolic helical domain A3L04_08775 PF04023 FeoA domain A3L04_08775 PF02421 Ferrous iron transport protein B A3L04_08820 PF00860 Permease family A3L04_08825 PF01048 Phosphorylase superfamily A3L04_08840 PF07969 Amidohydrolase family A3L04_08850 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 A3L04_08850 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain A3L04_08860 PF00483 Nucleotidyl transferase A3L04_08865 PF01336 OB-fold nucleic acid binding domain A3L04_08865 PF00152 tRNA synthetases class II (D, K and N) A3L04_08890 PF01244 Membrane dipeptidase (Peptidase family M19) A3L04_08895 PF01555 DNA methylase A3L04_08925 PF00005 ABC transporter A3L04_08935 PF08264 Anticodon-binding domain of tRNA A3L04_08935 PF00133 tRNA synthetases class I (I, L, M and V) A3L04_08935 PF13603 Leucyl-tRNA synthetase, Domain 2 A3L04_08935 PF09334 tRNA synthetases class I (M) A3L04_08955 PF00175 Oxidoreductase NAD-binding domain A3L04_08955 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B A3L04_08960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A3L04_08970 PF00231 ATP synthase A3L04_08985 PF08267 Cobalamin-independent synthase, N-terminal domain A3L04_08985 PF01717 Cobalamin-independent synthase, Catalytic domain A3L04_09000 PF01053 Cys/Met metabolism PLP-dependent enzyme A3L04_09005 PF01029 NusB family A3L04_09005 PF01189 16S rRNA methyltransferase RsmB/F A3L04_09015 PF09827 CRISPR associated protein Cas2 A3L04_09020 PF01867 CRISPR associated protein Cas1 A3L04_09030 PF00271 Helicase conserved C-terminal domain A3L04_09030 PF00270 DEAD/DEAH box helicase A3L04_09030 PF18019 HD domain A3L04_09090 PF02543 Carbamoyltransferase N-terminus A3L04_09090 PF16861 Carbamoyltransferase C-terminus A3L04_09100 PF01761 3-dehydroquinate synthase A3L04_09100 PF01202 Shikimate kinase A3L04_09110 PF01435 Peptidase family M48 A3L04_09115 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A3L04_09120 PF02641 Uncharacterized ACR, COG1993 A3L04_09145 PF11987 Translation-initiation factor 2 A3L04_09145 PF00009 Elongation factor Tu GTP binding domain A3L04_09145 PF04760 Translation initiation factor IF-2, N-terminal region A3L04_09160 PF00474 Sodium:solute symporter family A3L04_09170 PF01037 Lrp/AsnC ligand binding domain A3L04_09185 PF00294 pfkB family carbohydrate kinase A3L04_09185 PF01467 Cytidylyltransferase-like A3L04_09195 PF04055 Radical SAM superfamily A3L04_09195 PF06463 Molybdenum Cofactor Synthesis C A3L04_09200 PF01593 Flavin containing amine oxidoreductase A3L04_09210 PF02001 Protein of unknown function DUF134 A3L04_09230 PF07298 NnrU protein A3L04_09235 PF00144 Beta-lactamase A3L04_09250 PF01029 NusB family A3L04_09250 PF01189 16S rRNA methyltransferase RsmB/F A3L04_09255 PF10397 Adenylosuccinate lyase C-terminus A3L04_09255 PF00206 Lyase A3L04_09260 PF01522 Polysaccharide deacetylase A3L04_09265 PF13439 Glycosyltransferase Family 4 A3L04_09265 PF00534 Glycosyl transferases group 1 A3L04_09290 PF04199 Putative cyclase A3L04_09295 PF05221 S-adenosyl-L-homocysteine hydrolase A3L04_09295 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A3L04_09300 PF01042 Endoribonuclease L-PSP A3L04_09305 PF00005 ABC transporter A3L04_09310 PF01039 Carboxyl transferase domain A3L04_09320 PF02436 Conserved carboxylase domain A3L04_09320 PF00682 HMGL-like A3L04_09320 PF00364 Biotin-requiring enzyme A3L04_09325 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit A3L04_09330 PF00390 Malic enzyme, N-terminal domain A3L04_09330 PF03949 Malic enzyme, NAD binding domain A3L04_09340 PF00696 Amino acid kinase family A3L04_09355 PF08459 UvrC Helix-hairpin-helix N-terminal A3L04_09355 PF01541 GIY-YIG catalytic domain A3L04_09355 PF02151 UvrB/uvrC motif A3L04_09405 PF08543 Phosphomethylpyrimidine kinase A3L04_09405 PF10120 Thiamine-phosphate synthase A3L04_09420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A3L04_09420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A3L04_09425 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain A3L04_09425 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain A3L04_09430 PF01546 Peptidase family M20/M25/M40 A3L04_09430 PF07687 Peptidase dimerisation domain A3L04_09445 PF00150 Cellulase (glycosyl hydrolase family 5) A3L04_09445 PF00553 Cellulose binding domain A3L04_09450 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A3L04_09450 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A3L04_09460 PF01861 Branched-chain polyamine synthase A C-terminal domain A3L04_09470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A3L04_09480 PF00294 pfkB family carbohydrate kinase A3L04_09480 PF01467 Cytidylyltransferase-like A3L04_09495 PF05343 M42 glutamyl aminopeptidase A3L04_09520 PF08264 Anticodon-binding domain of tRNA A3L04_09520 PF00133 tRNA synthetases class I (I, L, M and V) A3L04_09520 PF10458 Valyl tRNA synthetase tRNA binding arm A3L04_09535 PF00586 AIR synthase related protein, N-terminal domain A3L04_09535 PF02769 AIR synthase related protein, C-terminal domain A3L04_09555 PF02222 ATP-grasp domain A3L04_09560 PF00731 AIR carboxylase A3L04_09565 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain A3L04_09565 PF02222 ATP-grasp domain A3L04_09580 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A3L04_09580 PF02844 Phosphoribosylglycinamide synthetase, N domain A3L04_09580 PF02843 Phosphoribosylglycinamide synthetase, C domain A3L04_09605 PF17863 AAA lid domain A3L04_09605 PF07726 ATPase family associated with various cellular activities (AAA) A3L04_09635 PF05552 Conserved TM helix A3L04_09635 PF00924 Mechanosensitive ion channel A3L04_09640 PF00483 Nucleotidyl transferase A3L04_09665 PF00005 ABC transporter A3L04_09685 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A3L04_09685 PF01926 50S ribosome-binding GTPase A3L04_09700 PF00953 Glycosyl transferase family 4 A3L04_09700 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A3L04_09750 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A3L04_09800 PF01396 Topoisomerase DNA binding C4 zinc finger A3L04_09800 PF01131 DNA topoisomerase A3L04_09800 PF01751 Toprim domain A3L04_09815 PF00270 DEAD/DEAH box helicase A3L04_09815 PF01751 Toprim domain A3L04_09815 PF17915 Reverse gyrase zinc finger A3L04_09815 PF01131 DNA topoisomerase A3L04_09840 PF05958 tRNA (Uracil-5-)-methyltransferase A3L04_09840 PF01938 TRAM domain A3L04_09845 PF03266 NTPase A3L04_09850 PF00005 ABC transporter A3L04_09855 PF01032 FecCD transport family A3L04_09860 PF17176 tRNA-binding domain A3L04_09860 PF13718 GNAT acetyltransferase 2 A3L04_09860 PF08351 Domain of unknown function (DUF1726) A3L04_09860 PF05127 Helicase A3L04_09895 PF00730 HhH-GPD superfamily base excision DNA repair protein A3L04_09905 PF00202 Aminotransferase class-III A3L04_09910 PF01235 Sodium:alanine symporter family A3L04_09925 PF07726 ATPase family associated with various cellular activities (AAA) A3L04_09925 PF17863 AAA lid domain A3L04_09945 PF01169 Uncharacterized protein family UPF0016 A3L04_09965 PF12327 FtsZ family, C-terminal domain A3L04_09965 PF00091 Tubulin/FtsZ family, GTPase domain A3L04_09970 PF13614 AAA domain A3L04_09985 PF00005 ABC transporter A3L04_10000 PF13190 PDGLE domain A3L04_10000 PF01891 Cobalt uptake substrate-specific transmembrane region A3L04_10055 PF01914 MarC family integral membrane protein A3L04_10060 PF01950 Fructose-1,6-bisphosphatase A3L04_10085 PF00465 Iron-containing alcohol dehydrogenase A3L04_10100 PF03551 Transcriptional regulator PadR-like family A3L04_10105 PF02769 AIR synthase related protein, C-terminal domain A3L04_10105 PF00586 AIR synthase related protein, N-terminal domain A3L04_10115 PF01916 Deoxyhypusine synthase A3L04_10130 PF13649 Methyltransferase domain A3L04_10145 PF00155 Aminotransferase class I and II A3L04_10160 PF03186 CobD/Cbib protein A3L04_10180 PF02654 Cobalamin-5-phosphate synthase A3L04_10190 PF07685 CobB/CobQ-like glutamine amidotransferase domain A3L04_10195 PF02277 Phosphoribosyltransferase A3L04_10215 PF02074 Carboxypeptidase Taq (M32) metallopeptidase A3L04_10250 PF01467 Cytidylyltransferase-like A3L04_10250 PF00293 NUDIX domain A3L04_10270 PF01066 CDP-alcohol phosphatidyltransferase A3L04_10285 PF00535 Glycosyl transferase family 2 A3L04_10295 PF02190 ATP-dependent protease La (LON) substrate-binding domain A3L04_10295 PF00004 ATPase family associated with various cellular activities (AAA) A3L04_10295 PF05362 Lon protease (S16) C-terminal proteolytic domain A3L04_10325 PF00211 Adenylate and Guanylate cyclase catalytic domain A3L04_10325 PF00069 Protein kinase domain A3L04_10330 PF17200 Single Cache domain 2 A3L04_10330 PF00672 HAMP domain A3L04_10330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A3L04_10335 PF05192 MutS domain III A3L04_10335 PF05190 MutS family domain IV A3L04_10335 PF00488 MutS domain V A3L04_10335 PF05188 MutS domain II A3L04_10335 PF01624 MutS domain I A3L04_10340 PF01008 Initiation factor 2 subunit family A3L04_10345 PF00994 Probable molybdopterin binding domain A3L04_10345 PF02464 Competence-damaged protein A3L04_10345 PF18146 Damage-inducible protein CinA KH domain A3L04_10350 PF12146 Serine aminopeptidase, S33 A3L04_10370 PF00709 Adenylosuccinate synthetase A3L04_10380 PF01300 Telomere recombination A3L04_10380 PF03481 Putative GTP-binding controlling metal-binding A3L04_10385 PF00534 Glycosyl transferases group 1 A3L04_10385 PF13439 Glycosyltransferase Family 4 A3L04_10390 PF18389 TrmO C-terminal domain A3L04_10390 PF01980 tRNA-methyltransferase O A3L04_10400 PF00120 Glutamine synthetase, catalytic domain A3L04_10400 PF03951 Glutamine synthetase, beta-Grasp domain A3L04_10420 PF01494 FAD binding domain A3L04_10455 PF00326 Prolyl oligopeptidase family A3L04_10455 PF07676 WD40-like Beta Propeller Repeat A3L04_10470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3L04_10470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3L04_10480 PF00571 CBS domain A3L04_10480 PF01380 SIS domain A3L04_10485 PF01402 Ribbon-helix-helix protein, copG family A3L04_10485 PF08753 NikR C terminal nickel binding domain A3L04_10540 PF00437 Type II/IV secretion system protein A3L04_10545 PF18073 Rubredoxin metal binding domain A3L04_10610 PF13635 Domain of unknown function (DUF4143) A3L04_10610 PF13173 AAA domain A3L04_10660 PF09334 tRNA synthetases class I (M) A3L04_10660 PF00133 tRNA synthetases class I (I, L, M and V) A3L04_10660 PF01588 Putative tRNA binding domain A3L04_10690 PF02272 DHHA1 domain A3L04_10690 PF01411 tRNA synthetases class II (A) A3L04_10690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A3L04_10715 PF13344 Haloacid dehalogenase-like hydrolase A3L04_10750 PF01926 50S ribosome-binding GTPase A3L04_10750 PF06071 Protein of unknown function (DUF933) A3L04_10780 PF00994 Probable molybdopterin binding domain A3L04_10785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A3L04_10785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A3L04_10790 PF05343 M42 glutamyl aminopeptidase A3L04_10795 PF01925 Sulfite exporter TauE/SafE A3L04_10805 PF01121 Dephospho-CoA kinase A3L04_10820 PF01301 Glycosyl hydrolases family 35 A3L04_10825 PF01380 SIS domain