A3L04_00090	PWY-5381	pyridine nucleotide cycling (plants)
A3L04_00145	PWY-1042	glycolysis IV (plant cytosol)
A3L04_00145	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_00145	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_00145	PWY-6891	thiazole biosynthesis II (Bacillus)
A3L04_00145	PWY-6892	thiazole biosynthesis I (E. coli)
A3L04_00145	PWY-7003	glycerol degradation to butanol
A3L04_00165	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A3L04_00290	PWY-4261	glycerol degradation I
A3L04_00485	PWY-5316	nicotine biosynthesis
A3L04_00485	PWY-5381	pyridine nucleotide cycling (plants)
A3L04_00485	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
A3L04_00485	PWY-7342	superpathway of nicotine biosynthesis
A3L04_00495	PWY-5316	nicotine biosynthesis
A3L04_00495	PWY-7342	superpathway of nicotine biosynthesis
A3L04_00505	PWY-5316	nicotine biosynthesis
A3L04_00505	PWY-7342	superpathway of nicotine biosynthesis
A3L04_00510	PWY-1622	formaldehyde assimilation I (serine pathway)
A3L04_00510	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
A3L04_00510	PWY-5913	TCA cycle VI (obligate autotrophs)
A3L04_00510	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_00510	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
A3L04_00510	PWY-6549	L-glutamine biosynthesis III
A3L04_00510	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
A3L04_00510	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
A3L04_00510	PWY-7124	ethylene biosynthesis V (engineered)
A3L04_00530	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_00530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_00530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_00575	PWY-6349	CDP-archaeol biosynthesis
A3L04_00660	PWY-1042	glycolysis IV (plant cytosol)
A3L04_00660	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A3L04_00660	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_00660	PWY-5723	Rubisco shunt
A3L04_00660	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_00660	PWY-6886	1-butanol autotrophic biosynthesis
A3L04_00660	PWY-6901	superpathway of glucose and xylose degradation
A3L04_00660	PWY-7003	glycerol degradation to butanol
A3L04_00660	PWY-7124	ethylene biosynthesis V (engineered)
A3L04_00660	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A3L04_00725	PWY-6167	flavin biosynthesis II (archaea)
A3L04_00725	PWY-6168	flavin biosynthesis III (fungi)
A3L04_00725	PWY-7980	A3L04_00725
A3L04_00730	PWY-7991	A3L04_00730
A3L04_00780	PWY-6167	flavin biosynthesis II (archaea)
A3L04_00780	PWY-6168	flavin biosynthesis III (fungi)
A3L04_00785	PWY-6167	flavin biosynthesis II (archaea)
A3L04_00785	PWY-6168	flavin biosynthesis III (fungi)
A3L04_00785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A3L04_00785	PWY-7991	A3L04_00785
A3L04_00890	PWY-622	starch biosynthesis
A3L04_00920	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_00935	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A3L04_00935	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A3L04_00955	PWY-6825	phosphatidylcholine biosynthesis V
A3L04_00985	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A3L04_00985	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A3L04_01175	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_01175	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_01195	PWY-6703	preQ<sub>0</sub> biosynthesis
A3L04_01215	PWY-40	putrescine biosynthesis I
A3L04_01215	PWY-6305	putrescine biosynthesis IV
A3L04_01235	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
A3L04_01285	PWY-5741	ethylmalonyl-CoA pathway
A3L04_01285	PWY-5743	3-hydroxypropanoate cycle
A3L04_01285	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A3L04_01285	PWY-6728	methylaspartate cycle
A3L04_01285	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A3L04_01285	PWY-7854	A3L04_01285
A3L04_01310	PWY-7805	A3L04_01310
A3L04_01310	PWY-7807	A3L04_01310
A3L04_01350	PWY-6834	spermidine biosynthesis III
A3L04_01400	PWY-6700	queuosine biosynthesis
A3L04_01510	PWY-6823	molybdenum cofactor biosynthesis
A3L04_01580	PWY-6349	CDP-archaeol biosynthesis
A3L04_01595	PWY-6823	molybdenum cofactor biosynthesis
A3L04_01595	PWY-7887	A3L04_01595
A3L04_01700	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
A3L04_01700	PWY-5532	adenosine nucleotides degradation IV
A3L04_01700	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
A3L04_01780	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A3L04_01795	PWY-6148	tetrahydromethanopterin biosynthesis
A3L04_01865	PWY-6123	inosine-5'-phosphate biosynthesis I
A3L04_01865	PWY-6124	inosine-5'-phosphate biosynthesis II
A3L04_01865	PWY-7234	inosine-5'-phosphate biosynthesis III
A3L04_01870	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A3L04_01870	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A3L04_01870	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A3L04_01870	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
A3L04_01900	PWY-6749	CMP-legionaminate biosynthesis I
A3L04_01935	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
A3L04_02025	PWY-7980	A3L04_02025
A3L04_02030	PWY-7980	A3L04_02030
A3L04_02055	PWY-6703	preQ<sub>0</sub> biosynthesis
A3L04_02070	PWY-5686	UMP biosynthesis
A3L04_02070	PWY-7790	A3L04_02070
A3L04_02070	PWY-7791	A3L04_02070
A3L04_02105	PWY-3801	sucrose degradation II (sucrose synthase)
A3L04_02105	PWY-5054	sorbitol biosynthesis I
A3L04_02105	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
A3L04_02105	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A3L04_02105	PWY-5659	GDP-mannose biosynthesis
A3L04_02105	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_02105	PWY-621	sucrose degradation III (sucrose invertase)
A3L04_02105	PWY-622	starch biosynthesis
A3L04_02105	PWY-6981	chitin biosynthesis
A3L04_02105	PWY-6992	1,5-anhydrofructose degradation
A3L04_02105	PWY-7238	sucrose biosynthesis II
A3L04_02105	PWY-7347	sucrose biosynthesis III
A3L04_02105	PWY-7385	1,3-propanediol biosynthesis (engineered)
A3L04_02110	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A3L04_02110	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A3L04_02110	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A3L04_02115	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A3L04_02115	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A3L04_02115	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A3L04_02125	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A3L04_02125	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A3L04_02125	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A3L04_02130	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A3L04_02145	PWY-4983	L-citrulline-nitric oxide cycle
A3L04_02145	PWY-4984	urea cycle
A3L04_02145	PWY-5	canavanine biosynthesis
A3L04_02145	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_02145	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_02150	PWY-4983	L-citrulline-nitric oxide cycle
A3L04_02150	PWY-4984	urea cycle
A3L04_02150	PWY-5	canavanine biosynthesis
A3L04_02150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_02150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_02195	PWY-1042	glycolysis IV (plant cytosol)
A3L04_02195	PWY-1622	formaldehyde assimilation I (serine pathway)
A3L04_02195	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A3L04_02195	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_02195	PWY-5723	Rubisco shunt
A3L04_02195	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_02195	PWY-6886	1-butanol autotrophic biosynthesis
A3L04_02195	PWY-6901	superpathway of glucose and xylose degradation
A3L04_02195	PWY-7003	glycerol degradation to butanol
A3L04_02195	PWY-7124	ethylene biosynthesis V (engineered)
A3L04_02195	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A3L04_02220	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A3L04_02220	PWY-5686	UMP biosynthesis
A3L04_02220	PWY-7790	A3L04_02220
A3L04_02220	PWY-7791	A3L04_02220
A3L04_02220	PWY-7796	A3L04_02220
A3L04_02275	PWY-5392	reductive TCA cycle II
A3L04_02275	PWY-5537	pyruvate fermentation to acetate V
A3L04_02275	PWY-5538	pyruvate fermentation to acetate VI
A3L04_02275	PWY-5690	TCA cycle II (plants and fungi)
A3L04_02275	PWY-5913	TCA cycle VI (obligate autotrophs)
A3L04_02275	PWY-6728	methylaspartate cycle
A3L04_02275	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A3L04_02275	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A3L04_02285	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
A3L04_02380	PWY-7805	A3L04_02380
A3L04_02380	PWY-7807	A3L04_02380
A3L04_02430	PWY-6519	8-amino-7-oxononanoate biosynthesis I
A3L04_02430	PWY-6578	8-amino-7-oxononanoate biosynthesis III
A3L04_02430	PWY-7147	8-amino-7-oxononanoate biosynthesis II
A3L04_02440	PWY-6689	tRNA splicing
A3L04_02440	PWY-7803	A3L04_02440
A3L04_02535	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
A3L04_02535	PWY-6596	adenosine nucleotides degradation I
A3L04_02535	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_02585	PWY-6938	NADH repair
A3L04_02600	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
A3L04_02600	PWY-7820	A3L04_02600
A3L04_02605	PWY-3801	sucrose degradation II (sucrose synthase)
A3L04_02605	PWY-6527	stachyose degradation
A3L04_02605	PWY-7238	sucrose biosynthesis II
A3L04_02605	PWY-7343	UDP-glucose biosynthesis
A3L04_02605	PWY-7817	A3L04_02605
A3L04_02675	PWY-7205	CMP phosphorylation
A3L04_02755	PWY-6482	diphthamide biosynthesis (archaea)
A3L04_02755	PWY-7546	diphthamide biosynthesis (eukaryotes)
A3L04_02980	PWY-6829	tRNA methylation (yeast)
A3L04_03085	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A3L04_03085	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A3L04_03085	PWY-6896	thiamin salvage I
A3L04_03085	PWY-6897	thiamin salvage II
A3L04_03100	PWY-2941	L-lysine biosynthesis II
A3L04_03100	PWY-2942	L-lysine biosynthesis III
A3L04_03100	PWY-5097	L-lysine biosynthesis VI
A3L04_03120	PWY-6829	tRNA methylation (yeast)
A3L04_03130	PWY-6654	phosphopantothenate biosynthesis III
A3L04_03145	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A3L04_03145	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
A3L04_03200	PWY-6823	molybdenum cofactor biosynthesis
A3L04_03235	PWY-6174	mevalonate pathway II (archaea)
A3L04_03235	PWY-7391	isoprene biosynthesis II (engineered)
A3L04_03235	PWY-7524	mevalonate pathway III (archaea)
A3L04_03235	PWY-922	mevalonate pathway I
A3L04_03305	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A3L04_03305	PWY-7177	UTP and CTP dephosphorylation II
A3L04_03305	PWY-7185	UTP and CTP dephosphorylation I
A3L04_03310	PWY-5392	reductive TCA cycle II
A3L04_03310	PWY-5537	pyruvate fermentation to acetate V
A3L04_03310	PWY-5538	pyruvate fermentation to acetate VI
A3L04_03310	PWY-5690	TCA cycle II (plants and fungi)
A3L04_03310	PWY-5913	TCA cycle VI (obligate autotrophs)
A3L04_03310	PWY-6728	methylaspartate cycle
A3L04_03310	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A3L04_03310	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A3L04_03340	PWY-5663	tetrahydrobiopterin biosynthesis I
A3L04_03340	PWY-5664	tetrahydrobiopterin biosynthesis II
A3L04_03340	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A3L04_03340	PWY-6703	preQ<sub>0</sub> biosynthesis
A3L04_03340	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A3L04_03340	PWY-6983	tetrahydrobiopterin biosynthesis III
A3L04_03340	PWY-7442	drosopterin and aurodrosopterin biosynthesis
A3L04_03340	PWY-7852	A3L04_03340
A3L04_03340	PWY-7853	A3L04_03340
A3L04_03500	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_03760	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A3L04_03760	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A3L04_03770	PWY-3081	L-lysine biosynthesis V
A3L04_03770	PWY-6871	3-methylbutanol biosynthesis
A3L04_03770	PWY-7710	A3L04_03770
A3L04_03800	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_03800	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_03805	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_03805	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_03825	PWY-6891	thiazole biosynthesis II (Bacillus)
A3L04_03825	PWY-6892	thiazole biosynthesis I (E. coli)
A3L04_03825	PWY-7560	methylerythritol phosphate pathway II
A3L04_03835	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
A3L04_03835	PWY-6164	3-dehydroquinate biosynthesis I
A3L04_03835	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
A3L04_03840	PWY-6164	3-dehydroquinate biosynthesis I
A3L04_03845	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A3L04_03845	PWY-6416	quinate degradation II
A3L04_03845	PWY-6707	gallate biosynthesis
A3L04_03850	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A3L04_03855	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A3L04_03895	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A3L04_03900	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
A3L04_03905	PWY-3461	L-tyrosine biosynthesis II
A3L04_03905	PWY-3462	L-phenylalanine biosynthesis II
A3L04_03905	PWY-6120	L-tyrosine biosynthesis III
A3L04_03905	PWY-6627	salinosporamide A biosynthesis
A3L04_03905	PWY-7626	bacilysin biosynthesis
A3L04_03915	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
A3L04_03935	PWY-5958	acridone alkaloid biosynthesis
A3L04_03935	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A3L04_03935	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A3L04_03940	PWY-5958	acridone alkaloid biosynthesis
A3L04_03940	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
A3L04_03940	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
A3L04_03960	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_03960	PWY-5686	UMP biosynthesis
A3L04_03960	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_03960	PWY-7790	A3L04_03960
A3L04_03960	PWY-7791	A3L04_03960
A3L04_03965	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_03965	PWY-5686	UMP biosynthesis
A3L04_03965	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_03965	PWY-7790	A3L04_03965
A3L04_03965	PWY-7791	A3L04_03965
A3L04_03970	PWY-3341	L-proline biosynthesis III
A3L04_03970	PWY-4981	L-proline biosynthesis II (from arginine)
A3L04_03970	PWY-6344	L-ornithine degradation II (Stickland reaction)
A3L04_03985	PWY-7285	methylwyosine biosynthesis
A3L04_03985	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A3L04_04000	PWY-5796	malonate decarboxylase activation
A3L04_04030	PWY-6749	CMP-legionaminate biosynthesis I
A3L04_04035	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A3L04_04035	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A3L04_04035	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_04035	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A3L04_04035	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A3L04_04035	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A3L04_04080	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
A3L04_04160	PWY-7942	A3L04_04160
A3L04_04185	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
A3L04_04185	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A3L04_04185	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
A3L04_04275	PWY-1622	formaldehyde assimilation I (serine pathway)
A3L04_04275	PWY-181	photorespiration
A3L04_04275	PWY-2161	folate polyglutamylation
A3L04_04275	PWY-2201	folate transformations I
A3L04_04275	PWY-3661	glycine betaine degradation I
A3L04_04275	PWY-3661-1	glycine betaine degradation II (mammalian)
A3L04_04275	PWY-3841	folate transformations II
A3L04_04275	PWY-5497	purine nucleobases degradation II (anaerobic)
A3L04_04300	PWY-6823	molybdenum cofactor biosynthesis
A3L04_04305	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_04395	PWY-1042	glycolysis IV (plant cytosol)
A3L04_04395	PWY-1622	formaldehyde assimilation I (serine pathway)
A3L04_04395	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A3L04_04395	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_04395	PWY-5723	Rubisco shunt
A3L04_04395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_04395	PWY-6886	1-butanol autotrophic biosynthesis
A3L04_04395	PWY-6901	superpathway of glucose and xylose degradation
A3L04_04395	PWY-7003	glycerol degradation to butanol
A3L04_04395	PWY-7124	ethylene biosynthesis V (engineered)
A3L04_04395	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A3L04_04415	PWY-6174	mevalonate pathway II (archaea)
A3L04_04415	PWY-7391	isoprene biosynthesis II (engineered)
A3L04_04415	PWY-922	mevalonate pathway I
A3L04_04420	PWY-6174	mevalonate pathway II (archaea)
A3L04_04420	PWY-7524	mevalonate pathway III (archaea)
A3L04_04495	PWY-40	putrescine biosynthesis I
A3L04_04495	PWY-43	putrescine biosynthesis II
A3L04_04495	PWY-6305	putrescine biosynthesis IV
A3L04_04495	PWY-6834	spermidine biosynthesis III
A3L04_04515	PWY-2301	<i>myo</i>-inositol biosynthesis
A3L04_04515	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
A3L04_04515	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
A3L04_04515	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
A3L04_04515	PWY-6664	di-myo-inositol phosphate biosynthesis
A3L04_04550	PWY-5532	adenosine nucleotides degradation IV
A3L04_04595	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A3L04_04835	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
A3L04_04865	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A3L04_04865	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A3L04_05010	PWY-5392	reductive TCA cycle II
A3L04_05010	PWY-5483	pyruvate fermentation to acetate III
A3L04_05010	PWY-5535	acetate formation from acetyl-CoA II
A3L04_05010	PWY-5537	pyruvate fermentation to acetate V
A3L04_05010	PWY-5538	pyruvate fermentation to acetate VI
A3L04_05010	PWY-5690	TCA cycle II (plants and fungi)
A3L04_05010	PWY-5913	TCA cycle VI (obligate autotrophs)
A3L04_05010	PWY-6728	methylaspartate cycle
A3L04_05010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A3L04_05010	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A3L04_05035	PWY-5941	glycogen degradation II (eukaryotic)
A3L04_05035	PWY-6731	starch degradation III
A3L04_05035	PWY-6737	starch degradation V
A3L04_05035	PWY-7238	sucrose biosynthesis II
A3L04_05100	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
A3L04_05195	PWY-6483	ceramide degradation
A3L04_05195	PWY-7119	sphingolipid recycling and degradation (yeast)
A3L04_05215	PWY-6906	chitin derivatives degradation
A3L04_05215	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
A3L04_05215	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
A3L04_05265	PWY-101	photosynthesis light reactions
A3L04_05455	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
A3L04_05455	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
A3L04_05455	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
A3L04_05490	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A3L04_05585	PWY-4041	&gamma;-glutamyl cycle
A3L04_05585	PWY-7942	A3L04_05585
A3L04_05595	PWY-4041	&gamma;-glutamyl cycle
A3L04_05595	PWY-7942	A3L04_05595
A3L04_05610	PWY-6148	tetrahydromethanopterin biosynthesis
A3L04_05730	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
A3L04_05730	PWY-6148	tetrahydromethanopterin biosynthesis
A3L04_05730	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
A3L04_05730	PWY-6898	thiamin salvage III
A3L04_05730	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A3L04_05730	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A3L04_05730	PWY-7356	thiamin salvage IV (yeast)
A3L04_05730	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
A3L04_05730	PWY-7852	A3L04_05730
A3L04_05730	PWY-7853	A3L04_05730
A3L04_05760	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A3L04_05760	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
A3L04_05760	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A3L04_05760	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_05760	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
A3L04_05760	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A3L04_05760	PWY-7205	CMP phosphorylation
A3L04_05760	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A3L04_05760	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_05760	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_05760	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
A3L04_05760	PWY-7224	purine deoxyribonucleosides salvage
A3L04_05760	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
A3L04_05760	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
A3L04_05780	PWY-5101	L-isoleucine biosynthesis II
A3L04_05780	PWY-5103	L-isoleucine biosynthesis III
A3L04_05780	PWY-5104	L-isoleucine biosynthesis IV
A3L04_05780	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
A3L04_05780	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
A3L04_05780	PWY-6389	(<i>S</i>)-acetoin biosynthesis
A3L04_05780	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A3L04_05785	PWY-5103	L-isoleucine biosynthesis III
A3L04_05785	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A3L04_05790	PWY-6871	3-methylbutanol biosynthesis
A3L04_05810	PWY-5101	L-isoleucine biosynthesis II
A3L04_05810	PWY-6871	3-methylbutanol biosynthesis
A3L04_05815	PWY-5101	L-isoleucine biosynthesis II
A3L04_05815	PWY-5103	L-isoleucine biosynthesis III
A3L04_05815	PWY-5104	L-isoleucine biosynthesis IV
A3L04_05815	PWY-7111	pyruvate fermentation to isobutanol (engineered)
A3L04_05895	PWY-4381	fatty acid biosynthesis initiation I
A3L04_05935	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A3L04_05935	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A3L04_05980	PWY-6167	flavin biosynthesis II (archaea)
A3L04_05995	PWY-7378	aminopropanol phosphate biosynthesis II
A3L04_06090	PWY-6703	preQ<sub>0</sub> biosynthesis
A3L04_06115	PWY-1042	glycolysis IV (plant cytosol)
A3L04_06115	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
A3L04_06115	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_06115	PWY-5723	Rubisco shunt
A3L04_06115	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_06115	PWY-6886	1-butanol autotrophic biosynthesis
A3L04_06115	PWY-6901	superpathway of glucose and xylose degradation
A3L04_06115	PWY-7003	glycerol degradation to butanol
A3L04_06115	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
A3L04_06115	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
A3L04_06175	PWY-6823	molybdenum cofactor biosynthesis
A3L04_06190	PWY-7799	A3L04_06190
A3L04_06190	PWY-7800	A3L04_06190
A3L04_06260	PWY-5532	adenosine nucleotides degradation IV
A3L04_06260	PWY-5723	Rubisco shunt
A3L04_06275	PWY-5155	&beta;-alanine biosynthesis III
A3L04_06545	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A3L04_06545	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A3L04_06545	PWY-6897	thiamin salvage II
A3L04_06545	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A3L04_06545	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A3L04_06545	PWY-6910	hydroxymethylpyrimidine salvage
A3L04_06545	PWY-7356	thiamin salvage IV (yeast)
A3L04_06545	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A3L04_06550	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A3L04_06550	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A3L04_06550	PWY-6897	thiamin salvage II
A3L04_06550	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A3L04_06550	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A3L04_06550	PWY-7356	thiamin salvage IV (yeast)
A3L04_06550	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A3L04_06555	PWY-6897	thiamin salvage II
A3L04_06555	PWY-7356	thiamin salvage IV (yeast)
A3L04_06555	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A3L04_06570	PWY-6899	base-degraded thiamin salvage
A3L04_06570	PWY-7356	thiamin salvage IV (yeast)
A3L04_06600	PWY-7799	A3L04_06600
A3L04_06600	PWY-7800	A3L04_06600
A3L04_06605	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
A3L04_06605	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
A3L04_06630	PWY-5686	UMP biosynthesis
A3L04_06630	PWY-7790	A3L04_06630
A3L04_06630	PWY-7791	A3L04_06630
A3L04_06655	PWY-6349	CDP-archaeol biosynthesis
A3L04_06690	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_06695	PWY-6700	queuosine biosynthesis
A3L04_06695	PWY-6711	archaeosine biosynthesis
A3L04_06695	PWY-7923	A3L04_06695
A3L04_06745	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
A3L04_06745	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
A3L04_06785	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
A3L04_06830	PWY-7205	CMP phosphorylation
A3L04_06885	PWY-6482	diphthamide biosynthesis (archaea)
A3L04_06885	PWY-7546	diphthamide biosynthesis (eukaryotes)
A3L04_06930	PWY-5839	menaquinol-7 biosynthesis
A3L04_06930	PWY-5844	menaquinol-9 biosynthesis
A3L04_06930	PWY-5849	menaquinol-6 biosynthesis
A3L04_06930	PWY-5890	menaquinol-10 biosynthesis
A3L04_06930	PWY-5891	menaquinol-11 biosynthesis
A3L04_06930	PWY-5892	menaquinol-12 biosynthesis
A3L04_06930	PWY-5895	menaquinol-13 biosynthesis
A3L04_06995	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A3L04_06995	PWY-5723	Rubisco shunt
A3L04_07075	PWY-7183	pyrimidine nucleobases salvage I
A3L04_07100	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
A3L04_07100	PWY-6891	thiazole biosynthesis II (Bacillus)
A3L04_07100	PWY-6892	thiazole biosynthesis I (E. coli)
A3L04_07105	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
A3L04_07120	PWY-1881	formate oxidation to CO<sub>2</sub>
A3L04_07120	PWY-5497	purine nucleobases degradation II (anaerobic)
A3L04_07120	PWY-6696	oxalate degradation III
A3L04_07120	PWY-7985	A3L04_07120
A3L04_07155	PWY-7234	inosine-5'-phosphate biosynthesis III
A3L04_07160	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_07175	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_07410	PWY-6832	2-aminoethylphosphonate degradation II
A3L04_07450	PWY-5941	glycogen degradation II (eukaryotic)
A3L04_07450	PWY-6724	starch degradation II
A3L04_07450	PWY-6737	starch degradation V
A3L04_07450	PWY-7238	sucrose biosynthesis II
A3L04_07470	PWY-6823	molybdenum cofactor biosynthesis
A3L04_07540	PWY-7851	A3L04_07540
A3L04_07640	PWY-181	photorespiration
A3L04_07755	PWY-6654	phosphopantothenate biosynthesis III
A3L04_07770	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
A3L04_07770	PWY-622	starch biosynthesis
A3L04_07770	PWY-7900	A3L04_07770
A3L04_07835	PWY-6349	CDP-archaeol biosynthesis
A3L04_07880	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
A3L04_07880	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
A3L04_07955	PWY-6855	chitin degradation I (archaea)
A3L04_07955	PWY-6902	chitin degradation II
A3L04_07955	PWY-7822	A3L04_07955
A3L04_07960	PWY-6717	(1,4)-&beta;-xylan degradation
A3L04_07960	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
A3L04_08005	PWY-1881	formate oxidation to CO<sub>2</sub>
A3L04_08005	PWY-5497	purine nucleobases degradation II (anaerobic)
A3L04_08005	PWY-6696	oxalate degradation III
A3L04_08005	PWY-7985	A3L04_08005
A3L04_08090	PWY-5964	guanylyl molybdenum cofactor biosynthesis
A3L04_08090	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
A3L04_08145	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
A3L04_08145	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
A3L04_08145	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
A3L04_08145	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
A3L04_08145	PWY-6978	plastoquinol-9 biosynthesis II
A3L04_08195	PWY-6654	phosphopantothenate biosynthesis III
A3L04_08325	PWY-6482	diphthamide biosynthesis (archaea)
A3L04_08325	PWY-7546	diphthamide biosynthesis (eukaryotes)
A3L04_08390	PWY-1042	glycolysis IV (plant cytosol)
A3L04_08390	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_08390	PWY-6886	1-butanol autotrophic biosynthesis
A3L04_08390	PWY-6901	superpathway of glucose and xylose degradation
A3L04_08390	PWY-7003	glycerol degradation to butanol
A3L04_08400	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
A3L04_08400	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_08410	PWY-702	L-methionine biosynthesis II
A3L04_08415	PWY-2941	L-lysine biosynthesis II
A3L04_08415	PWY-2942	L-lysine biosynthesis III
A3L04_08415	PWY-5097	L-lysine biosynthesis VI
A3L04_08415	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
A3L04_08415	PWY-6559	spermidine biosynthesis II
A3L04_08415	PWY-6562	norspermidine biosynthesis
A3L04_08415	PWY-7153	grixazone biosynthesis
A3L04_08415	PWY-7977	A3L04_08415
A3L04_08420	PWY-2941	L-lysine biosynthesis II
A3L04_08420	PWY-2942	L-lysine biosynthesis III
A3L04_08420	PWY-5097	L-lysine biosynthesis VI
A3L04_08420	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
A3L04_08420	PWY-6559	spermidine biosynthesis II
A3L04_08420	PWY-6562	norspermidine biosynthesis
A3L04_08420	PWY-7153	grixazone biosynthesis
A3L04_08420	PWY-7977	A3L04_08420
A3L04_08575	PWY-101	photosynthesis light reactions
A3L04_08680	PWY-6749	CMP-legionaminate biosynthesis I
A3L04_08685	PWY-5659	GDP-mannose biosynthesis
A3L04_08685	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
A3L04_08690	PWY-5656	mannosylglycerate biosynthesis I
A3L04_08695	PWY-5656	mannosylglycerate biosynthesis I
A3L04_08755	PWY-6749	CMP-legionaminate biosynthesis I
A3L04_08790	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
A3L04_08790	PWY-6174	mevalonate pathway II (archaea)
A3L04_08790	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
A3L04_08790	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
A3L04_08790	PWY-7102	bisabolene biosynthesis
A3L04_08790	PWY-7391	isoprene biosynthesis II (engineered)
A3L04_08790	PWY-7524	mevalonate pathway III (archaea)
A3L04_08790	PWY-7560	methylerythritol phosphate pathway II
A3L04_08790	PWY-922	mevalonate pathway I
A3L04_08890	PWY-7533	gliotoxin biosynthesis
A3L04_08985	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A3L04_08985	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A3L04_08985	PWY-6936	seleno-amino acid biosynthesis
A3L04_08985	PWY-702	L-methionine biosynthesis II
A3L04_08990	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A3L04_08990	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
A3L04_08990	PWY-6936	seleno-amino acid biosynthesis
A3L04_08990	PWY-702	L-methionine biosynthesis II
A3L04_08995	PWY-2201	folate transformations I
A3L04_08995	PWY-3841	folate transformations II
A3L04_09100	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_09180	PWY-5392	reductive TCA cycle II
A3L04_09180	PWY-5537	pyruvate fermentation to acetate V
A3L04_09180	PWY-5538	pyruvate fermentation to acetate VI
A3L04_09180	PWY-5690	TCA cycle II (plants and fungi)
A3L04_09180	PWY-5913	TCA cycle VI (obligate autotrophs)
A3L04_09180	PWY-6728	methylaspartate cycle
A3L04_09180	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A3L04_09180	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A3L04_09185	PWY-7851	A3L04_09185
A3L04_09255	PWY-6123	inosine-5'-phosphate biosynthesis I
A3L04_09255	PWY-6124	inosine-5'-phosphate biosynthesis II
A3L04_09255	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_09255	PWY-7234	inosine-5'-phosphate biosynthesis III
A3L04_09290	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
A3L04_09290	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
A3L04_09290	PWY-7717	A3L04_09290
A3L04_09290	PWY-7733	A3L04_09290
A3L04_09290	PWY-7734	A3L04_09290
A3L04_09290	PWY-7765	A3L04_09290
A3L04_09295	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
A3L04_09310	PWY-4381	fatty acid biosynthesis initiation I
A3L04_09310	PWY-5743	3-hydroxypropanoate cycle
A3L04_09310	PWY-5744	glyoxylate assimilation
A3L04_09310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
A3L04_09310	PWY-6722	candicidin biosynthesis
A3L04_09405	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
A3L04_09405	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
A3L04_09405	PWY-6897	thiamin salvage II
A3L04_09405	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
A3L04_09405	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
A3L04_09405	PWY-7356	thiamin salvage IV (yeast)
A3L04_09405	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
A3L04_09420	PWY-5686	UMP biosynthesis
A3L04_09420	PWY-7790	A3L04_09420
A3L04_09420	PWY-7791	A3L04_09420
A3L04_09450	PWY-4981	L-proline biosynthesis II (from arginine)
A3L04_09450	PWY-4984	urea cycle
A3L04_09450	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
A3L04_09470	PWY-5686	UMP biosynthesis
A3L04_09470	PWY-7790	A3L04_09470
A3L04_09470	PWY-7791	A3L04_09470
A3L04_09480	PWY-6167	flavin biosynthesis II (archaea)
A3L04_09480	PWY-6168	flavin biosynthesis III (fungi)
A3L04_09535	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A3L04_09535	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A3L04_09535	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A3L04_09560	PWY-6123	inosine-5'-phosphate biosynthesis I
A3L04_09560	PWY-7234	inosine-5'-phosphate biosynthesis III
A3L04_09580	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
A3L04_09580	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
A3L04_09580	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
A3L04_09585	PWY-7234	inosine-5'-phosphate biosynthesis III
A3L04_09680	PWY-6349	CDP-archaeol biosynthesis
A3L04_09700	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
A3L04_09700	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
A3L04_09700	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
A3L04_09840	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
A3L04_09845	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
A3L04_09845	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
A3L04_09845	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
A3L04_09845	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
A3L04_10005	PWY-5392	reductive TCA cycle II
A3L04_10005	PWY-5537	pyruvate fermentation to acetate V
A3L04_10005	PWY-5538	pyruvate fermentation to acetate VI
A3L04_10005	PWY-5690	TCA cycle II (plants and fungi)
A3L04_10005	PWY-5913	TCA cycle VI (obligate autotrophs)
A3L04_10005	PWY-6728	methylaspartate cycle
A3L04_10005	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
A3L04_10005	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
A3L04_10060	PWY-1042	glycolysis IV (plant cytosol)
A3L04_10060	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
A3L04_10060	PWY-5484	glycolysis II (from fructose 6-phosphate)
A3L04_10060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
A3L04_10060	PWY-7385	1,3-propanediol biosynthesis (engineered)
A3L04_10180	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A3L04_10180	PWY-6269	adenosylcobalamin salvage from cobinamide II
A3L04_10180	PWY-7961	A3L04_10180
A3L04_10180	PWY-7963	A3L04_10180
A3L04_10180	PWY-7964	A3L04_10180
A3L04_10180	PWY-7965	A3L04_10180
A3L04_10180	PWY-7966	A3L04_10180
A3L04_10180	PWY-7967	A3L04_10180
A3L04_10180	PWY-7968	A3L04_10180
A3L04_10180	PWY-7969	A3L04_10180
A3L04_10180	PWY-7970	A3L04_10180
A3L04_10180	PWY-7975	A3L04_10180
A3L04_10195	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
A3L04_10195	PWY-6269	adenosylcobalamin salvage from cobinamide II
A3L04_10195	PWY-7964	A3L04_10195
A3L04_10195	PWY-7965	A3L04_10195
A3L04_10195	PWY-7966	A3L04_10195
A3L04_10195	PWY-7967	A3L04_10195
A3L04_10195	PWY-7968	A3L04_10195
A3L04_10195	PWY-7969	A3L04_10195
A3L04_10195	PWY-7970	A3L04_10195
A3L04_10340	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
A3L04_10340	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
A3L04_10370	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
A3L04_10400	PWY-381	nitrate reduction II (assimilatory)
A3L04_10400	PWY-5675	nitrate reduction V (assimilatory)
A3L04_10400	PWY-6549	L-glutamine biosynthesis III
A3L04_10400	PWY-6963	ammonia assimilation cycle I
A3L04_10400	PWY-6964	ammonia assimilation cycle II
A3L04_10430	PWY-6855	chitin degradation I (archaea)
A3L04_10470	PWY-7294	xylose degradation IV
A3L04_10470	PWY-7295	L-arabinose degradation IV
A3L04_10690	PWY-7805	A3L04_10690
A3L04_10690	PWY-7807	A3L04_10690
A3L04_10820	PWY-6807	xyloglucan degradation II (exoglucanase)
