locus-tag class description CL1_0002 PF01242 6-pyruvoyl tetrahydropterin synthase CL1_0008 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL1_0009 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CL1_0009 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CL1_0009 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CL1_0011 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL1_0012 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CL1_0012 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CL1_0012 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CL1_0017 PF01975 Survival protein SurE CL1_0019 PF00448 SRP54-type protein, GTPase domain CL1_0019 PF02881 SRP54-type protein, helical bundle domain CL1_0021 PF02608 ABC transporter substrate-binding protein PnrA-like CL1_0025 PF01297 Zinc-uptake complex component A periplasmic CL1_0029 PF01406 tRNA synthetases class I (C) catalytic domain CL1_0029 PF09190 DALR domain CL1_0030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CL1_0035 PF02581 Thiamine monophosphate synthase CL1_0035 PF08543 Phosphomethylpyrimidine kinase CL1_0038 PF01964 Radical SAM ThiC family CL1_0039 PF01259 SAICAR synthetase CL1_0042 PF00885 6,7-dimethyl-8-ribityllumazine synthase CL1_0043 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CL1_0043 PF00925 GTP cyclohydrolase II CL1_0044 PF00677 Lumazine binding domain CL1_0045 PF01872 RibD C-terminal domain CL1_0045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CL1_0046 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CL1_0046 PF00326 Prolyl oligopeptidase family CL1_0049 PF00535 Glycosyl transferase family 2 CL1_0050 PF01384 Phosphate transporter family CL1_0051 PF01702 Queuine tRNA-ribosyltransferase CL1_0071 PF01934 Protein of unknown function DUF86 CL1_0072 PF05343 M42 glutamyl aminopeptidase CL1_0074 PF03176 MMPL family CL1_0079 PF07690 Major Facilitator Superfamily CL1_0082 PF01923 Cobalamin adenosyltransferase CL1_0084 PF01008 Initiation factor 2 subunit family CL1_0085 PF00994 Probable molybdopterin binding domain CL1_0085 PF18146 Damage-inducible protein CinA KH domain CL1_0085 PF02464 Competence-damaged protein CL1_0086 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CL1_0086 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CL1_0087 PF02594 Uncharacterised ACR, YggU family COG1872 CL1_0090 PF03129 Anticodon binding domain CL1_0090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL1_0091 PF16657 Maltogenic Amylase, C-terminal domain CL1_0091 PF02903 Alpha amylase, N-terminal ig-like domain CL1_0091 PF00128 Alpha amylase, catalytic domain CL1_0094 PF01554 MatE CL1_0098 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase CL1_0101 PF01321 Creatinase/Prolidase N-terminal domain CL1_0101 PF00557 Metallopeptidase family M24 CL1_0107 PF17910 FeoB cytosolic helical domain CL1_0107 PF07664 Ferrous iron transport protein B C terminus CL1_0107 PF04023 FeoA domain CL1_0107 PF02421 Ferrous iron transport protein B CL1_0107 PF07670 Nucleoside recognition CL1_0109 PF00483 Nucleotidyl transferase CL1_0110 PF08264 Anticodon-binding domain of tRNA CL1_0110 PF01588 Putative tRNA binding domain CL1_0110 PF09334 tRNA synthetases class I (M) CL1_0114 PF01925 Sulfite exporter TauE/SafE CL1_0116 PF01925 Sulfite exporter TauE/SafE CL1_0118 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL1_0118 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL1_0119 PF09180 Prolyl-tRNA synthetase, C-terminal CL1_0119 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL1_0119 PF03129 Anticodon binding domain CL1_0121 PF16861 Carbamoyltransferase C-terminus CL1_0121 PF02543 Carbamoyltransferase N-terminus CL1_0123 PF00155 Aminotransferase class I and II CL1_0125 PF02224 Cytidylate kinase CL1_0126 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) CL1_0128 PF04493 Endonuclease V CL1_0132 PF02080 TrkA-C domain CL1_0132 PF02254 TrkA-N domain CL1_0135 PF01381 Helix-turn-helix CL1_0137 PF01497 Periplasmic binding protein CL1_0142 PF00970 Oxidoreductase FAD-binding domain CL1_0142 PF00175 Oxidoreductase NAD-binding domain CL1_0142 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CL1_0143 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CL1_0149 PF01458 Uncharacterized protein family (UPF0051) CL1_0150 PF00005 ABC transporter CL1_0151 PF05362 Lon protease (S16) C-terminal proteolytic domain CL1_0151 PF00004 ATPase family associated with various cellular activities (AAA) CL1_0151 PF02190 ATP-dependent protease La (LON) substrate-binding domain CL1_0153 PF01042 Endoribonuclease L-PSP CL1_0155 PF01022 Bacterial regulatory protein, arsR family CL1_0157 PF13404 AsnC-type helix-turn-helix domain CL1_0157 PF01037 Lrp/AsnC ligand binding domain CL1_0158 PF01940 Integral membrane protein DUF92 CL1_0159 PF02926 THUMP domain CL1_0159 PF02568 Thiamine biosynthesis protein (ThiI) CL1_0179 PF00750 tRNA synthetases class I (R) CL1_0179 PF05746 DALR anticodon binding domain CL1_0179 PF03485 Arginyl tRNA synthetase N terminal domain CL1_0183 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CL1_0183 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CL1_0183 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CL1_0184 PF02350 UDP-N-acetylglucosamine 2-epimerase CL1_0188 PF04055 Radical SAM superfamily CL1_0188 PF06463 Molybdenum Cofactor Synthesis C CL1_0190 PF01899 Na+/H+ ion antiporter subunit CL1_0191 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CL1_0192 PF03334 Na+/H+ antiporter subunit CL1_0194 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CL1_0194 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CL1_0194 PF00361 Proton-conducting membrane transporter CL1_0194 PF13244 Domain of unknown function (DUF4040) CL1_0195 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CL1_0196 PF00361 Proton-conducting membrane transporter CL1_0197 PF00361 Proton-conducting membrane transporter CL1_0199 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CL1_0200 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CL1_0201 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CL1_0204 PF00860 Permease family CL1_0205 PF00202 Aminotransferase class-III CL1_0206 PF01037 Lrp/AsnC ligand binding domain CL1_0207 PF00557 Metallopeptidase family M24 CL1_0207 PF01321 Creatinase/Prolidase N-terminal domain CL1_0216 PF01161 Phosphatidylethanolamine-binding protein CL1_0223 PF17862 AAA+ lid domain CL1_0223 PF01434 Peptidase family M41 CL1_0223 PF00004 ATPase family associated with various cellular activities (AAA) CL1_0225 PF04055 Radical SAM superfamily CL1_0234 PF01281 Ribosomal protein L9, N-terminal domain CL1_0234 PF02272 DHHA1 domain CL1_0234 PF01368 DHH family CL1_0234 PF03948 Ribosomal protein L9, C-terminal domain CL1_0237 PF01588 Putative tRNA binding domain CL1_0237 PF09334 tRNA synthetases class I (M) CL1_0237 PF00133 tRNA synthetases class I (I, L, M and V) CL1_0240 PF00248 Aldo/keto reductase family CL1_0242 PF01022 Bacterial regulatory protein, arsR family CL1_0248 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CL1_0248 PF01676 Metalloenzyme superfamily CL1_0249 PF01230 HIT domain CL1_0251 PF02511 Thymidylate synthase complementing protein CL1_0254 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CL1_0254 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CL1_0256 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CL1_0256 PF01189 16S rRNA methyltransferase RsmB/F CL1_0256 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CL1_0263 PF00491 Arginase family CL1_0266 PF00999 Sodium/hydrogen exchanger family CL1_0268 PF00654 Voltage gated chloride channel CL1_0270 PF02769 AIR synthase related protein, C-terminal domain CL1_0270 PF00586 AIR synthase related protein, N-terminal domain CL1_0272 PF00534 Glycosyl transferases group 1 CL1_0273 PF01522 Polysaccharide deacetylase CL1_0278 PF00919 Uncharacterized protein family UPF0004 CL1_0278 PF01938 TRAM domain CL1_0278 PF04055 Radical SAM superfamily CL1_0280 PF00398 Ribosomal RNA adenine dimethylase CL1_0286 PF00710 Asparaginase, N-terminal CL1_0286 PF17763 Glutaminase/Asparaginase C-terminal domain CL1_0287 PF02934 GatB/GatE catalytic domain CL1_0287 PF02637 GatB domain CL1_0288 PF01926 50S ribosome-binding GTPase CL1_0288 PF09269 Domain of unknown function (DUF1967) CL1_0288 PF01018 GTP1/OBG CL1_0290 PF02673 Bacitracin resistance protein BacA CL1_0291 PF00483 Nucleotidyl transferase CL1_0293 PF00478 IMP dehydrogenase / GMP reductase domain CL1_0293 PF00571 CBS domain CL1_0294 PF00557 Metallopeptidase family M24 CL1_0295 PF02386 Cation transport protein CL1_0296 PF00005 ABC transporter CL1_0303 PF00132 Bacterial transferase hexapeptide (six repeats) CL1_0304 PF01255 Putative undecaprenyl diphosphate synthase CL1_0307 PF03129 Anticodon binding domain CL1_0307 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL1_0307 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL1_0309 PF03725 3' exoribonuclease family, domain 2 CL1_0309 PF01138 3' exoribonuclease family, domain 1 CL1_0309 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CL1_0309 PF00013 KH domain CL1_0309 PF00575 S1 RNA binding domain CL1_0326 PF01343 Peptidase family S49 CL1_0328 PF01594 AI-2E family transporter CL1_0329 PF00809 Pterin binding enzyme CL1_0334 PF00005 ABC transporter CL1_0336 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CL1_0337 PF04851 Type III restriction enzyme, res subunit CL1_0337 PF00271 Helicase conserved C-terminal domain CL1_0337 PF12344 Ultra-violet resistance protein B CL1_0337 PF17757 UvrB interaction domain CL1_0337 PF02151 UvrB/uvrC motif CL1_0338 PF01416 tRNA pseudouridine synthase CL1_0339 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CL1_0339 PF03484 tRNA synthetase B5 domain CL1_0342 PF01409 tRNA synthetases class II core domain (F) CL1_0343 PF08240 Alcohol dehydrogenase GroES-like domain CL1_0343 PF00107 Zinc-binding dehydrogenase CL1_0344 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CL1_0349 PF06418 CTP synthase N-terminus CL1_0349 PF00117 Glutamine amidotransferase class-I CL1_0353 PF13673 Acetyltransferase (GNAT) domain CL1_0355 PF01142 tRNA pseudouridine synthase D (TruD) CL1_0358 PF01336 OB-fold nucleic acid binding domain CL1_0358 PF00152 tRNA synthetases class II (D, K and N) CL1_0360 PF01966 HD domain CL1_0363 PF13419 Haloacid dehalogenase-like hydrolase CL1_0365 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CL1_0370 PF01131 DNA topoisomerase CL1_0370 PF01751 Toprim domain CL1_0370 PF17915 Reverse gyrase zinc finger CL1_0370 PF00270 DEAD/DEAH box helicase CL1_0374 PF13607 Succinyl-CoA ligase like flavodoxin domain CL1_0374 PF00583 Acetyltransferase (GNAT) family CL1_0374 PF13380 CoA binding domain CL1_0379 PF18019 HD domain CL1_0381 PF01867 CRISPR associated protein Cas1 CL1_0383 PF09827 CRISPR associated protein Cas2 CL1_0385 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_0385 PF13192 Thioredoxin domain CL1_0388 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_0389 PF01751 Toprim domain CL1_0389 PF08272 Topoisomerase I zinc-ribbon-like CL1_0389 PF01396 Topoisomerase DNA binding C4 zinc finger CL1_0389 PF01131 DNA topoisomerase CL1_0395 PF16868 NMT1-like family CL1_0397 PF00091 Tubulin/FtsZ family, GTPase domain CL1_0397 PF12327 FtsZ family, C-terminal domain CL1_0400 PF03946 Ribosomal protein L11, N-terminal domain CL1_0400 PF00298 Ribosomal protein L11, RNA binding domain CL1_0401 PF00687 Ribosomal protein L1p/L10e family CL1_0405 PF00692 dUTPase CL1_0407 PF04055 Radical SAM superfamily CL1_0407 PF02310 B12 binding domain CL1_0410 PF00749 tRNA synthetases class I (E and Q), catalytic domain CL1_0410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CL1_0412 PF11897 Protein of unknown function (DUF3417) CL1_0412 PF00343 Carbohydrate phosphorylase CL1_0413 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CL1_0413 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CL1_0414 PF00483 Nucleotidyl transferase CL1_0416 PF02223 Thymidylate kinase CL1_0418 PF00561 alpha/beta hydrolase fold CL1_0419 PF00083 Sugar (and other) transporter CL1_0420 PF07690 Major Facilitator Superfamily CL1_0421 PF03009 Glycerophosphoryl diester phosphodiesterase family CL1_0422 PF03009 Glycerophosphoryl diester phosphodiesterase family CL1_0424 PF01266 FAD dependent oxidoreductase CL1_0425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_0425 PF04324 BFD-like [2Fe-2S] binding domain CL1_0436 PF02347 Glycine cleavage system P-protein CL1_0437 PF02347 Glycine cleavage system P-protein CL1_0440 PF04565 RNA polymerase Rpb2, domain 3 CL1_0440 PF04563 RNA polymerase beta subunit CL1_0440 PF10385 RNA polymerase beta subunit external 1 domain CL1_0440 PF04561 RNA polymerase Rpb2, domain 2 CL1_0440 PF00562 RNA polymerase Rpb2, domain 6 CL1_0440 PF04560 RNA polymerase Rpb2, domain 7 CL1_0441 PF04997 RNA polymerase Rpb1, domain 1 CL1_0441 PF00623 RNA polymerase Rpb1, domain 2 CL1_0441 PF04983 RNA polymerase Rpb1, domain 3 CL1_0441 PF05000 RNA polymerase Rpb1, domain 4 CL1_0441 PF04998 RNA polymerase Rpb1, domain 5 CL1_0442 PF00623 RNA polymerase Rpb1, domain 2 CL1_0442 PF04983 RNA polymerase Rpb1, domain 3 CL1_0442 PF04997 RNA polymerase Rpb1, domain 1 CL1_0442 PF04998 RNA polymerase Rpb1, domain 5 CL1_0442 PF05000 RNA polymerase Rpb1, domain 4 CL1_0446 PF00177 Ribosomal protein S7p/S5e CL1_0451 PF00155 Aminotransferase class I and II CL1_0459 PF03725 3' exoribonuclease family, domain 2 CL1_0459 PF00013 KH domain CL1_0459 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CL1_0459 PF00575 S1 RNA binding domain CL1_0459 PF01138 3' exoribonuclease family, domain 1 CL1_0462 PF13190 PDGLE domain CL1_0462 PF01891 Cobalt uptake substrate-specific transmembrane region CL1_0465 PF00005 ABC transporter CL1_0467 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CL1_0467 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CL1_0467 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CL1_0467 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CL1_0469 PF01050 Mannose-6-phosphate isomerase CL1_0469 PF00483 Nucleotidyl transferase CL1_0471 PF06560 Glucose-6-phosphate isomerase (GPI) CL1_0475 PF00753 Metallo-beta-lactamase superfamily CL1_0475 PF12706 Beta-lactamase superfamily domain CL1_0482 PF10609 NUBPL iron-transfer P-loop NTPase CL1_0484 PF12804 MobA-like NTP transferase domain CL1_0485 PF01455 HupF/HypC family CL1_0486 PF01924 Hydrogenase formation hypA family CL1_0487 PF17788 HypF Kae1-like domain CL1_0487 PF01300 Telomere recombination CL1_0487 PF00708 Acylphosphatase CL1_0487 PF07503 HypF finger CL1_0489 PF05168 HEPN domain CL1_0490 PF00586 AIR synthase related protein, N-terminal domain CL1_0490 PF02769 AIR synthase related protein, C-terminal domain CL1_0492 PF00266 Aminotransferase class-V CL1_0495 PF01018 GTP1/OBG CL1_0495 PF01926 50S ribosome-binding GTPase CL1_0495 PF04055 Radical SAM superfamily CL1_0496 PF00155 Aminotransferase class I and II CL1_0500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_0500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CL1_0503 PF00082 Subtilase family CL1_0508 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CL1_0508 PF02896 PEP-utilising enzyme, TIM barrel domain CL1_0508 PF00391 PEP-utilising enzyme, mobile domain CL1_0509 PF01554 MatE CL1_0510 PF01554 MatE CL1_0532 PF00239 Resolvase, N terminal domain CL1_0535 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CL1_0537 PF00291 Pyridoxal-phosphate dependent enzyme CL1_0538 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CL1_0538 PF10996 Beta-Casp domain CL1_0538 PF00753 Metallo-beta-lactamase superfamily CL1_0539 PF00227 Proteasome subunit CL1_0542 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CL1_0542 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CL1_0543 PF00209 Sodium:neurotransmitter symporter family CL1_0545 PF00543 Nitrogen regulatory protein P-II CL1_0546 PF09210 Domain of unknown function (DUF1957) CL1_0546 PF03065 Glycosyl hydrolase family 57 CL1_0549 PF01402 Ribbon-helix-helix protein, copG family CL1_0549 PF08753 NikR C terminal nickel binding domain CL1_0557 PF01321 Creatinase/Prolidase N-terminal domain CL1_0557 PF00557 Metallopeptidase family M24 CL1_0558 PF00133 tRNA synthetases class I (I, L, M and V) CL1_0558 PF13603 Leucyl-tRNA synthetase, Domain 2 CL1_0558 PF08264 Anticodon-binding domain of tRNA CL1_0558 PF09334 tRNA synthetases class I (M) CL1_0561 PF07690 Major Facilitator Superfamily CL1_0563 PF00348 Polyprenyl synthetase CL1_0565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CL1_0565 PF17770 Ribonuclease J C-terminal domain CL1_0565 PF00753 Metallo-beta-lactamase superfamily CL1_0566 PF01070 FMN-dependent dehydrogenase CL1_0569 PF10509 Galactokinase galactose-binding signature CL1_0569 PF08544 GHMP kinases C terminal CL1_0569 PF00288 GHMP kinases N terminal domain CL1_0570 PF01875 Memo-like protein CL1_0571 PF01048 Phosphorylase superfamily CL1_0572 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_0572 PF18267 Rubredoxin NAD+ reductase C-terminal domain CL1_0572 PF04324 BFD-like [2Fe-2S] binding domain CL1_0572 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CL1_0573 PF01048 Phosphorylase superfamily CL1_0576 PF02978 Signal peptide binding domain CL1_0576 PF02881 SRP54-type protein, helical bundle domain CL1_0576 PF00448 SRP54-type protein, GTPase domain CL1_0579 PF00156 Phosphoribosyl transferase domain CL1_0581 PF01037 Lrp/AsnC ligand binding domain CL1_0586 PF00318 Ribosomal protein S2 CL1_0587 PF00113 Enolase, C-terminal TIM barrel domain CL1_0587 PF03952 Enolase, N-terminal domain CL1_0590 PF00380 Ribosomal protein S9/S16 CL1_0591 PF00572 Ribosomal protein L13 CL1_0593 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CL1_0593 PF01000 RNA polymerase Rpb3/RpoA insert domain CL1_0593 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CL1_0594 PF00411 Ribosomal protein S11 CL1_0595 PF01479 S4 domain CL1_0595 PF00163 Ribosomal protein S4/S9 N-terminal domain CL1_0596 PF00416 Ribosomal protein S13/S18 CL1_0597 PF16198 tRNA pseudouridylate synthase B C-terminal domain CL1_0597 PF01509 TruB family pseudouridylate synthase (N terminal domain) CL1_0604 PF00344 SecY translocase CL1_0605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CL1_0606 PF00327 Ribosomal protein L30p/L7e CL1_0607 PF03719 Ribosomal protein S5, C-terminal domain CL1_0607 PF00333 Ribosomal protein S5, N-terminal domain CL1_0608 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CL1_0611 PF00347 Ribosomal protein L6 CL1_0612 PF00410 Ribosomal protein S8 CL1_0614 PF00673 ribosomal L5P family C-terminus CL1_0614 PF00281 Ribosomal protein L5 CL1_0616 PF00467 KOW motif CL1_0616 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CL1_0617 PF00238 Ribosomal protein L14p/L23e CL1_0618 PF00366 Ribosomal protein S17 CL1_0620 PF01253 Translation initiation factor SUI1 CL1_0621 PF00831 Ribosomal L29 protein CL1_0622 PF07650 KH domain CL1_0622 PF00189 Ribosomal protein S3, C-terminal domain CL1_0623 PF00237 Ribosomal protein L22p/L17e CL1_0624 PF00203 Ribosomal protein S19 CL1_0625 PF03947 Ribosomal Proteins L2, C-terminal domain CL1_0625 PF00181 Ribosomal Proteins L2, RNA binding domain CL1_0626 PF00276 Ribosomal protein L23 CL1_0627 PF00573 Ribosomal protein L4/L1 family CL1_0628 PF00297 Ribosomal protein L3 CL1_0633 PF00266 Aminotransferase class-V CL1_0636 PF00152 tRNA synthetases class II (D, K and N) CL1_0636 PF01336 OB-fold nucleic acid binding domain CL1_0638 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CL1_0638 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CL1_0638 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_0639 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CL1_0639 PF00037 4Fe-4S binding domain CL1_0639 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CL1_0642 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CL1_0644 PF00374 Nickel-dependent hydrogenase CL1_0647 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CL1_0647 PF01137 RNA 3'-terminal phosphate cyclase CL1_0652 PF00772 DnaB-like helicase N terminal domain CL1_0652 PF14528 LAGLIDADG-like domain CL1_0652 PF03796 DnaB-like helicase C terminal domain CL1_0654 PF01039 Carboxyl transferase domain CL1_0656 PF00682 HMGL-like CL1_0656 PF02436 Conserved carboxylase domain CL1_0656 PF00364 Biotin-requiring enzyme CL1_0657 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CL1_0658 PF00005 ABC transporter CL1_0658 PF00571 CBS domain CL1_0667 PF01138 3' exoribonuclease family, domain 1 CL1_0667 PF03725 3' exoribonuclease family, domain 2 CL1_0668 PF00575 S1 RNA binding domain CL1_0668 PF00013 KH domain CL1_0668 PF01138 3' exoribonuclease family, domain 1 CL1_0668 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CL1_0668 PF03725 3' exoribonuclease family, domain 2 CL1_0673 PF01230 HIT domain CL1_0679 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL1_0684 PF00857 Isochorismatase family CL1_0686 PF01008 Initiation factor 2 subunit family CL1_0686 PF03061 Thioesterase superfamily CL1_0687 PF03551 Transcriptional regulator PadR-like family CL1_0692 PF00575 S1 RNA binding domain CL1_0692 PF03725 3' exoribonuclease family, domain 2 CL1_0692 PF01138 3' exoribonuclease family, domain 1 CL1_0692 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CL1_0692 PF00013 KH domain CL1_0698 PF03104 DNA polymerase family B, exonuclease domain CL1_0698 PF00136 DNA polymerase family B CL1_0700 PF01189 16S rRNA methyltransferase RsmB/F CL1_0700 PF01029 NusB family CL1_0702 PF01871 AMMECR1 CL1_0703 PF01910 Thiamine-binding protein CL1_0707 PF03576 Peptidase family S58 CL1_0708 PF00528 Binding-protein-dependent transport system inner membrane component CL1_0711 PF00860 Permease family CL1_0718 PF01040 UbiA prenyltransferase family CL1_0720 PF00717 Peptidase S24-like CL1_0720 PF12802 MarR family CL1_0721 PF01926 50S ribosome-binding GTPase CL1_0725 PF00009 Elongation factor Tu GTP binding domain CL1_0725 PF03144 Elongation factor Tu domain 2 CL1_0725 PF09105 Elongation factor SelB, winged helix CL1_0725 PF09107 Elongation factor SelB, winged helix CL1_0725 PF09106 Elongation factor SelB, winged helix CL1_0731 PF00924 Mechanosensitive ion channel CL1_0732 PF01189 16S rRNA methyltransferase RsmB/F CL1_0732 PF01029 NusB family CL1_0738 PF01906 Putative heavy-metal-binding CL1_0744 PF00795 Carbon-nitrogen hydrolase CL1_0747 PF04389 Peptidase family M28 CL1_0747 PF02225 PA domain CL1_0748 PF00795 Carbon-nitrogen hydrolase CL1_0748 PF00535 Glycosyl transferase family 2 CL1_0757 PF00719 Inorganic pyrophosphatase CL1_0758 PF00575 S1 RNA binding domain CL1_0763 PF00082 Subtilase family CL1_0763 PF05922 Peptidase inhibitor I9 CL1_0776 PF00117 Glutamine amidotransferase class-I CL1_0776 PF00958 GMP synthase C terminal domain CL1_0776 PF02540 NAD synthase CL1_0779 PF02568 Thiamine biosynthesis protein (ThiI) CL1_0779 PF00958 GMP synthase C terminal domain CL1_0779 PF00117 Glutamine amidotransferase class-I CL1_0781 PF02769 AIR synthase related protein, C-terminal domain CL1_0781 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CL1_0781 PF00586 AIR synthase related protein, N-terminal domain CL1_0785 PF02843 Phosphoribosylglycinamide synthetase, C domain CL1_0785 PF02844 Phosphoribosylglycinamide synthetase, N domain CL1_0785 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CL1_0786 PF00731 AIR carboxylase CL1_0787 PF02222 ATP-grasp domain CL1_0788 PF02769 AIR synthase related protein, C-terminal domain CL1_0788 PF00586 AIR synthase related protein, N-terminal domain CL1_0791 PF08494 DEAD/H associated CL1_0791 PF00270 DEAD/DEAH box helicase CL1_0791 PF00271 Helicase conserved C-terminal domain CL1_0792 PF01259 SAICAR synthetase CL1_0793 PF00156 Phosphoribosyl transferase domain CL1_0794 PF01568 Molydopterin dinucleotide binding domain CL1_0794 PF00384 Molybdopterin oxidoreductase CL1_0794 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CL1_0795 PF01174 SNO glutamine amidotransferase family CL1_0796 PF01680 SOR/SNZ family CL1_0797 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CL1_0797 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CL1_0799 PF02445 Quinolinate synthetase A protein CL1_0800 PF02910 Fumarate reductase flavoprotein C-term CL1_0800 PF00890 FAD binding domain CL1_0803 PF00571 CBS domain CL1_0803 PF00478 IMP dehydrogenase / GMP reductase domain CL1_0806 PF08753 NikR C terminal nickel binding domain CL1_0806 PF01402 Ribbon-helix-helix protein, copG family CL1_0816 PF00118 TCP-1/cpn60 chaperonin family CL1_0818 PF03477 ATP cone domain CL1_0818 PF13597 Anaerobic ribonucleoside-triphosphate reductase CL1_0824 PF00132 Bacterial transferase hexapeptide (six repeats) CL1_0825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CL1_0826 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CL1_0826 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CL1_0827 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CL1_0827 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CL1_0827 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CL1_0828 PF00535 Glycosyl transferase family 2 CL1_0830 PF02350 UDP-N-acetylglucosamine 2-epimerase CL1_0837 PF16347 Domain of unknown function (DUF4976) CL1_0837 PF00884 Sulfatase CL1_0838 PF01554 MatE CL1_0840 PF00483 Nucleotidyl transferase CL1_0841 PF01370 NAD dependent epimerase/dehydratase family CL1_0846 PF17863 AAA lid domain CL1_0846 PF07726 ATPase family associated with various cellular activities (AAA) CL1_0856 PF00534 Glycosyl transferases group 1 CL1_0856 PF13439 Glycosyltransferase Family 4 CL1_0860 PF13344 Haloacid dehalogenase-like hydrolase CL1_0862 PF00317 Ribonucleotide reductase, all-alpha domain CL1_0862 PF02867 Ribonucleotide reductase, barrel domain CL1_0862 PF03477 ATP cone domain CL1_0863 PF00156 Phosphoribosyl transferase domain CL1_0866 PF13635 Domain of unknown function (DUF4143) CL1_0866 PF13173 AAA domain CL1_0874 PF00133 tRNA synthetases class I (I, L, M and V) CL1_0874 PF08264 Anticodon-binding domain of tRNA CL1_0877 PF01850 PIN domain CL1_0880 PF06968 Biotin and Thiamin Synthesis associated domain CL1_0880 PF04055 Radical SAM superfamily CL1_0882 PF00534 Glycosyl transferases group 1 CL1_0882 PF08323 Starch synthase catalytic domain CL1_0883 PF01978 Sugar-specific transcriptional regulator TrmB CL1_0883 PF11495 Archaeal transcriptional regulator TrmB CL1_0884 PF16657 Maltogenic Amylase, C-terminal domain CL1_0884 PF02903 Alpha amylase, N-terminal ig-like domain CL1_0884 PF00128 Alpha amylase, catalytic domain CL1_0885 PF01547 Bacterial extracellular solute-binding protein CL1_0886 PF00528 Binding-protein-dependent transport system inner membrane component CL1_0887 PF00528 Binding-protein-dependent transport system inner membrane component CL1_0889 PF17912 MalK OB fold domain CL1_0889 PF00005 ABC transporter CL1_0889 PF03459 TOBE domain CL1_0891 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CL1_0891 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CL1_0891 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CL1_0891 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CL1_0893 PF00753 Metallo-beta-lactamase superfamily CL1_0893 PF12706 Beta-lactamase superfamily domain CL1_0894 PF03169 OPT oligopeptide transporter protein CL1_0896 PF07687 Peptidase dimerisation domain CL1_0896 PF01546 Peptidase family M20/M25/M40 CL1_0898 PF17785 PUA-like domain CL1_0898 PF10672 S-adenosylmethionine-dependent methyltransferase CL1_0902 PF06745 KaiC CL1_0909 PF03951 Glutamine synthetase, beta-Grasp domain CL1_0909 PF00120 Glutamine synthetase, catalytic domain CL1_0911 PF02540 NAD synthase CL1_0913 PF00005 ABC transporter CL1_0913 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL1_0914 PF00005 ABC transporter CL1_0914 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL1_0915 PF12911 N-terminal TM domain of oligopeptide transport permease C CL1_0915 PF00528 Binding-protein-dependent transport system inner membrane component CL1_0916 PF00528 Binding-protein-dependent transport system inner membrane component CL1_0918 PF01979 Amidohydrolase family CL1_0919 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CL1_0924 PF02540 NAD synthase CL1_0927 PF01411 tRNA synthetases class II (A) CL1_0927 PF02272 DHHA1 domain CL1_0927 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL1_0928 PF01813 ATP synthase subunit D CL1_0929 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL1_0929 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL1_0930 PF02874 ATP synthase alpha/beta family, beta-barrel domain CL1_0930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CL1_0930 PF16886 ATPsynthase alpha/beta subunit N-term extension CL1_0931 PF01990 ATP synthase (F/14-kDa) subunit CL1_0933 PF01991 ATP synthase (E/31 kDa) subunit CL1_0935 PF01496 V-type ATPase 116kDa subunit family CL1_0937 PF02254 TrkA-N domain CL1_0937 PF02080 TrkA-C domain CL1_0938 PF02355 Protein export membrane protein CL1_0938 PF07549 SecD/SecF GG Motif CL1_0939 PF07549 SecD/SecF GG Motif CL1_0939 PF02355 Protein export membrane protein CL1_0940 PF02675 S-adenosylmethionine decarboxylase CL1_0943 PF06745 KaiC CL1_0954 PF01784 NIF3 (NGG1p interacting factor 3) CL1_0957 PF02272 DHHA1 domain CL1_0957 PF01411 tRNA synthetases class II (A) CL1_0957 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL1_0963 PF13393 Histidyl-tRNA synthetase CL1_0963 PF03129 Anticodon binding domain CL1_0965 PF00999 Sodium/hydrogen exchanger family CL1_0966 PF00478 IMP dehydrogenase / GMP reductase domain CL1_0966 PF00571 CBS domain CL1_0970 PF01171 PP-loop family CL1_0972 PF03065 Glycosyl hydrolase family 57 CL1_0972 PF09094 Domain of unknown function (DUF1925) CL1_0972 PF09095 Domain of unknown function (DUF1926) CL1_0977 PF00999 Sodium/hydrogen exchanger family CL1_0977 PF02254 TrkA-N domain CL1_0978 PF00282 Pyridoxal-dependent decarboxylase conserved domain CL1_0980 PF16916 Dimerisation domain of Zinc Transporter CL1_0980 PF01545 Cation efflux family CL1_0982 PF14306 PUA-like domain CL1_0982 PF01747 ATP-sulfurylase CL1_0989 PF01925 Sulfite exporter TauE/SafE CL1_0991 PF16347 Domain of unknown function (DUF4976) CL1_0991 PF00884 Sulfatase CL1_0995 PF00795 Carbon-nitrogen hydrolase CL1_0995 PF00535 Glycosyl transferase family 2 CL1_0996 PF12411 Choline sulfatase enzyme C terminal CL1_0996 PF00884 Sulfatase CL1_0997 PF00535 Glycosyl transferase family 2 CL1_0998 PF13180 PDZ domain CL1_0999 PF01171 PP-loop family CL1_1007 PF01470 Pyroglutamyl peptidase CL1_1008 PF01494 FAD binding domain CL1_1012 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CL1_1013 PF00294 pfkB family carbohydrate kinase CL1_1016 PF17863 AAA lid domain CL1_1016 PF07726 ATPase family associated with various cellular activities (AAA) CL1_1020 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CL1_1023 PF00437 Type II/IV secretion system protein CL1_1027 PF01926 50S ribosome-binding GTPase CL1_1027 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CL1_1031 PF02926 THUMP domain CL1_1031 PF10672 S-adenosylmethionine-dependent methyltransferase CL1_1031 PF01170 Putative RNA methylase family UPF0020 CL1_1033 PF01557 Fumarylacetoacetate (FAA) hydrolase family CL1_1037 PF01022 Bacterial regulatory protein, arsR family CL1_1040 PF00128 Alpha amylase, catalytic domain CL1_1040 PF02806 Alpha amylase, C-terminal all-beta domain CL1_1042 PF03853 YjeF-related protein N-terminus CL1_1042 PF01256 Carbohydrate kinase CL1_1043 PF01661 Macro domain CL1_1043 PF16193 AAA C-terminal domain CL1_1043 PF12002 MgsA AAA+ ATPase C terminal CL1_1043 PF05496 Holliday junction DNA helicase RuvB P-loop domain CL1_1045 PF01979 Amidohydrolase family CL1_1047 PF01048 Phosphorylase superfamily CL1_1053 PF00027 Cyclic nucleotide-binding domain CL1_1053 PF00520 Ion transport protein CL1_1079 PF13091 PLD-like domain CL1_1080 PF00145 C-5 cytosine-specific DNA methylase CL1_1081 PF00730 HhH-GPD superfamily base excision DNA repair protein CL1_1081 PF00633 Helix-hairpin-helix motif CL1_1082 PF02899 Phage integrase, N-terminal SAM-like domain CL1_1082 PF00589 Phage integrase family CL1_1084 PF01467 Cytidylyltransferase-like CL1_1087 PF00814 Glycoprotease family CL1_1089 PF01513 ATP-NAD kinase CL1_1092 PF01189 16S rRNA methyltransferase RsmB/F CL1_1092 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CL1_1092 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CL1_1096 PF03176 MMPL family CL1_1100 PF00899 ThiF family CL1_1102 PF02391 MoaE protein CL1_1106 PF01725 Ham1 family CL1_1107 PF13404 AsnC-type helix-turn-helix domain CL1_1107 PF01037 Lrp/AsnC ligand binding domain CL1_1117 PF03952 Enolase, N-terminal domain CL1_1117 PF00113 Enolase, C-terminal TIM barrel domain CL1_1119 PF01791 DeoC/LacD family aldolase CL1_1122 PF00202 Aminotransferase class-III CL1_1123 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1125 PF05496 Holliday junction DNA helicase RuvB P-loop domain CL1_1125 PF05491 RuvB C-terminal winged helix domain CL1_1125 PF17864 RuvB AAA lid domain CL1_1130 PF00146 NADH dehydrogenase CL1_1131 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CL1_1131 PF00374 Nickel-dependent hydrogenase CL1_1132 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CL1_1132 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CL1_1132 PF00374 Nickel-dependent hydrogenase CL1_1133 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CL1_1135 PF00361 Proton-conducting membrane transporter CL1_1140 PF03334 Na+/H+ antiporter subunit CL1_1141 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CL1_1142 PF01899 Na+/H+ ion antiporter subunit CL1_1143 PF12800 4Fe-4S binding domain CL1_1143 PF13247 4Fe-4S dicluster domain CL1_1144 PF13247 4Fe-4S dicluster domain CL1_1144 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CL1_1144 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1145 PF01226 Formate/nitrite transporter CL1_1147 PF12800 4Fe-4S binding domain CL1_1147 PF13247 4Fe-4S dicluster domain CL1_1148 PF01568 Molydopterin dinucleotide binding domain CL1_1148 PF00384 Molybdopterin oxidoreductase CL1_1148 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CL1_1151 PF00374 Nickel-dependent hydrogenase CL1_1152 PF05958 tRNA (Uracil-5-)-methyltransferase CL1_1152 PF01938 TRAM domain CL1_1152 PF02475 Met-10+ like-protein CL1_1153 PF01938 TRAM domain CL1_1153 PF00919 Uncharacterized protein family UPF0004 CL1_1153 PF04055 Radical SAM superfamily CL1_1158 PF01384 Phosphate transporter family CL1_1161 PF00005 ABC transporter CL1_1161 PF00571 CBS domain CL1_1171 PF07676 WD40-like Beta Propeller Repeat CL1_1171 PF00326 Prolyl oligopeptidase family CL1_1176 PF01555 DNA methylase CL1_1177 PF01244 Membrane dipeptidase (Peptidase family M19) CL1_1181 PF03099 Biotin/lipoate A/B protein ligase family CL1_1183 PF12557 Cob(I)alamin adenosyltransferase N terminal CL1_1183 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CL1_1188 PF04172 LrgB-like family CL1_1189 PF03788 LrgA family CL1_1192 PF04055 Radical SAM superfamily CL1_1192 PF06463 Molybdenum Cofactor Synthesis C CL1_1194 PF03167 Uracil DNA glycosylase superfamily CL1_1195 PF03553 Na+/H+ antiporter family CL1_1197 PF04675 DNA ligase N terminus CL1_1197 PF01068 ATP dependent DNA ligase domain CL1_1197 PF04679 ATP dependent DNA ligase C terminal region CL1_1199 PF00156 Phosphoribosyl transferase domain CL1_1202 PF05958 tRNA (Uracil-5-)-methyltransferase CL1_1203 PF13404 AsnC-type helix-turn-helix domain CL1_1203 PF01037 Lrp/AsnC ligand binding domain CL1_1205 PF01950 Fructose-1,6-bisphosphatase CL1_1207 PF01593 Flavin containing amine oxidoreductase CL1_1208 PF00696 Amino acid kinase family CL1_1215 PF00005 ABC transporter CL1_1224 PF01209 ubiE/COQ5 methyltransferase family CL1_1227 PF08669 Glycine cleavage T-protein C-terminal barrel domain CL1_1227 PF01571 Aminomethyltransferase folate-binding domain CL1_1228 PF00582 Universal stress protein family CL1_1229 PF01949 Protein of unknown function DUF99 CL1_1230 PF03091 CutA1 divalent ion tolerance protein CL1_1231 PF00708 Acylphosphatase CL1_1233 PF00294 pfkB family carbohydrate kinase CL1_1238 PF10609 NUBPL iron-transfer P-loop NTPase CL1_1239 PF00005 ABC transporter CL1_1240 PF01032 FecCD transport family CL1_1243 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL1_1244 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CL1_1244 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CL1_1246 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CL1_1247 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CL1_1247 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CL1_1250 PF01384 Phosphate transporter family CL1_1251 PF01926 50S ribosome-binding GTPase CL1_1251 PF13167 GTP-binding GTPase N-terminal CL1_1251 PF16360 GTP-binding GTPase Middle Region CL1_1258 PF00588 SpoU rRNA Methylase family CL1_1259 PF02558 Ketopantoate reductase PanE/ApbA CL1_1259 PF08546 Ketopantoate reductase PanE/ApbA C terminal CL1_1261 PF01842 ACT domain CL1_1261 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL1_1261 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL1_1262 PF05681 Fumarate hydratase (Fumerase) CL1_1263 PF05683 Fumarase C-terminus CL1_1264 PF03949 Malic enzyme, NAD binding domain CL1_1264 PF00390 Malic enzyme, N-terminal domain CL1_1265 PF01546 Peptidase family M20/M25/M40 CL1_1265 PF07687 Peptidase dimerisation domain CL1_1268 PF03600 Citrate transporter CL1_1272 PF01523 Putative modulator of DNA gyrase CL1_1273 PF01523 Putative modulator of DNA gyrase CL1_1275 PF01833 IPT/TIG domain CL1_1275 PF00686 Starch binding domain CL1_1275 PF02806 Alpha amylase, C-terminal all-beta domain CL1_1275 PF00128 Alpha amylase, catalytic domain CL1_1282 PF03437 BtpA family CL1_1286 PF04307 LexA-binding, inner membrane-associated putative hydrolase CL1_1293 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CL1_1293 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CL1_1294 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CL1_1294 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CL1_1300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL1_1300 PF02824 TGS domain CL1_1300 PF03129 Anticodon binding domain CL1_1300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL1_1301 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CL1_1301 PF01871 AMMECR1 CL1_1302 PF00291 Pyridoxal-phosphate dependent enzyme CL1_1304 PF00227 Proteasome subunit CL1_1305 PF00005 ABC transporter CL1_1306 PF01032 FecCD transport family CL1_1309 PF00814 Glycoprotease family CL1_1309 PF00583 Acetyltransferase (GNAT) family CL1_1311 PF00155 Aminotransferase class I and II CL1_1313 PF14528 LAGLIDADG-like domain CL1_1313 PF03796 DnaB-like helicase C terminal domain CL1_1313 PF00772 DnaB-like helicase N terminal domain CL1_1314 PF17864 RuvB AAA lid domain CL1_1314 PF05491 RuvB C-terminal winged helix domain CL1_1314 PF05496 Holliday junction DNA helicase RuvB P-loop domain CL1_1317 PF06463 Molybdenum Cofactor Synthesis C CL1_1317 PF04055 Radical SAM superfamily CL1_1320 PF06745 KaiC CL1_1324 PF14572 Phosphoribosyl synthetase-associated domain CL1_1324 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CL1_1329 PF01921 tRNA synthetases class I (K) CL1_1331 PF00083 Sugar (and other) transporter CL1_1333 PF01112 Asparaginase CL1_1338 PF07690 Major Facilitator Superfamily CL1_1339 PF06480 FtsH Extracellular CL1_1339 PF01434 Peptidase family M41 CL1_1339 PF00004 ATPase family associated with various cellular activities (AAA) CL1_1339 PF17862 AAA+ lid domain CL1_1341 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CL1_1341 PF00953 Glycosyl transferase family 4 CL1_1342 PF13419 Haloacid dehalogenase-like hydrolase CL1_1344 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CL1_1345 PF01435 Peptidase family M48 CL1_1347 PF13186 Iron-sulfur cluster-binding domain CL1_1347 PF04055 Radical SAM superfamily CL1_1348 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CL1_1348 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CL1_1349 PF00082 Subtilase family CL1_1351 PF01861 Branched-chain polyamine synthase A C-terminal domain CL1_1353 PF01883 Iron-sulfur cluster assembly protein CL1_1359 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CL1_1359 PF13247 4Fe-4S dicluster domain CL1_1359 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1360 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CL1_1360 PF00970 Oxidoreductase FAD-binding domain CL1_1360 PF00175 Oxidoreductase NAD-binding domain CL1_1364 PF06508 Queuosine biosynthesis protein QueC CL1_1365 PF01180 Dihydroorotate dehydrogenase CL1_1366 PF17806 Sarcosine oxidase A3 domain CL1_1366 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1366 PF01571 Aminomethyltransferase folate-binding domain CL1_1366 PF08669 Glycine cleavage T-protein C-terminal barrel domain CL1_1369 PF01266 FAD dependent oxidoreductase CL1_1373 PF18113 Rubredoxin binding C-terminal domain CL1_1373 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1374 PF01040 UbiA prenyltransferase family CL1_1376 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CL1_1377 PF07690 Major Facilitator Superfamily CL1_1379 PF00288 GHMP kinases N terminal domain CL1_1379 PF08544 GHMP kinases C terminal CL1_1379 PF10509 Galactokinase galactose-binding signature CL1_1380 PF01266 FAD dependent oxidoreductase CL1_1380 PF08669 Glycine cleavage T-protein C-terminal barrel domain CL1_1380 PF01571 Aminomethyltransferase folate-binding domain CL1_1380 PF16350 FAD dependent oxidoreductase central domain CL1_1381 PF08669 Glycine cleavage T-protein C-terminal barrel domain CL1_1381 PF01571 Aminomethyltransferase folate-binding domain CL1_1381 PF17806 Sarcosine oxidase A3 domain CL1_1381 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1382 PF00474 Sodium:solute symporter family CL1_1385 PF09269 Domain of unknown function (DUF1967) CL1_1385 PF01018 GTP1/OBG CL1_1385 PF01926 50S ribosome-binding GTPase CL1_1387 PF01965 DJ-1/PfpI family CL1_1393 PF01914 MarC family integral membrane protein CL1_1394 PF02566 OsmC-like protein CL1_1395 PF04055 Radical SAM superfamily CL1_1396 PF07722 Peptidase C26 CL1_1397 PF00155 Aminotransferase class I and II CL1_1398 PF01008 Initiation factor 2 subunit family CL1_1403 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CL1_1403 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CL1_1412 PF00850 Histone deacetylase domain CL1_1413 PF00999 Sodium/hydrogen exchanger family CL1_1421 PF13439 Glycosyltransferase Family 4 CL1_1421 PF00534 Glycosyl transferases group 1 CL1_1422 PF01040 UbiA prenyltransferase family CL1_1423 PF17284 Spermidine synthase tetramerisation domain CL1_1427 PF10369 Small subunit of acetolactate synthase CL1_1428 PF00361 Proton-conducting membrane transporter CL1_1434 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CL1_1435 PF01899 Na+/H+ ion antiporter subunit CL1_1436 PF01597 Glycine cleavage H-protein CL1_1439 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CL1_1439 PF13247 4Fe-4S dicluster domain CL1_1439 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1440 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CL1_1440 PF00175 Oxidoreductase NAD-binding domain CL1_1440 PF00970 Oxidoreductase FAD-binding domain CL1_1442 PF08704 tRNA methyltransferase complex GCD14 subunit CL1_1446 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CL1_1447 PF00528 Binding-protein-dependent transport system inner membrane component CL1_1449 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL1_1449 PF00005 ABC transporter CL1_1450 PF00005 ABC transporter CL1_1450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CL1_1452 PF08459 UvrC Helix-hairpin-helix N-terminal CL1_1452 PF02151 UvrB/uvrC motif CL1_1452 PF01541 GIY-YIG catalytic domain CL1_1454 PF02535 ZIP Zinc transporter CL1_1457 PF00005 ABC transporter CL1_1458 PF01381 Helix-turn-helix CL1_1463 PF01169 Uncharacterized protein family UPF0016 CL1_1467 PF00091 Tubulin/FtsZ family, GTPase domain CL1_1467 PF12327 FtsZ family, C-terminal domain CL1_1468 PF13614 AAA domain CL1_1470 PF01467 Cytidylyltransferase-like CL1_1470 PF00294 pfkB family carbohydrate kinase CL1_1472 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CL1_1475 PF01066 CDP-alcohol phosphatidyltransferase CL1_1475 PF00483 Nucleotidyl transferase CL1_1478 PF00005 ABC transporter CL1_1481 PF00293 NUDIX domain CL1_1481 PF13344 Haloacid dehalogenase-like hydrolase CL1_1482 PF01467 Cytidylyltransferase-like CL1_1482 PF00294 pfkB family carbohydrate kinase CL1_1487 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CL1_1487 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CL1_1488 PF00265 Thymidine kinase CL1_1491 PF00145 C-5 cytosine-specific DNA methylase CL1_1497 PF03673 Uncharacterised protein family (UPF0128) CL1_1501 PF13380 CoA binding domain CL1_1506 PF01926 50S ribosome-binding GTPase CL1_1506 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CL1_1513 PF00528 Binding-protein-dependent transport system inner membrane component CL1_1514 PF17912 MalK OB fold domain CL1_1514 PF00005 ABC transporter CL1_1515 PF18389 TrmO C-terminal domain CL1_1515 PF01980 tRNA-methyltransferase O CL1_1517 PF07726 ATPase family associated with various cellular activities (AAA) CL1_1517 PF17863 AAA lid domain CL1_1522 PF05221 S-adenosyl-L-homocysteine hydrolase CL1_1522 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CL1_1523 PF04199 Putative cyclase CL1_1534 PF13419 Haloacid dehalogenase-like hydrolase CL1_1539 PF00293 NUDIX domain CL1_1539 PF01467 Cytidylyltransferase-like CL1_1545 PF13649 Methyltransferase domain CL1_1556 PF00881 Nitroreductase family CL1_1558 PF12706 Beta-lactamase superfamily domain CL1_1568 PF00004 ATPase family associated with various cellular activities (AAA) CL1_1568 PF06480 FtsH Extracellular CL1_1568 PF01434 Peptidase family M41 CL1_1568 PF17862 AAA+ lid domain CL1_1569 PF00011 Hsp20/alpha crystallin family CL1_1570 PF04675 DNA ligase N terminus CL1_1570 PF01068 ATP dependent DNA ligase domain CL1_1570 PF04679 ATP dependent DNA ligase C terminal region CL1_1587 PF13607 Succinyl-CoA ligase like flavodoxin domain CL1_1587 PF13380 CoA binding domain CL1_1587 PF00583 Acetyltransferase (GNAT) family CL1_1590 PF00004 ATPase family associated with various cellular activities (AAA) CL1_1590 PF17862 AAA+ lid domain CL1_1590 PF06480 FtsH Extracellular CL1_1590 PF01434 Peptidase family M41 CL1_1592 PF03453 MoeA N-terminal region (domain I and II) CL1_1592 PF00994 Probable molybdopterin binding domain CL1_1592 PF03454 MoeA C-terminal region (domain IV) CL1_1593 PF02403 Seryl-tRNA synthetase N-terminal domain CL1_1593 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CL1_1594 PF13173 AAA domain CL1_1594 PF13635 Domain of unknown function (DUF4143) CL1_1598 PF01300 Telomere recombination CL1_1598 PF03481 Putative GTP-binding controlling metal-binding CL1_1599 PF00534 Glycosyl transferases group 1 CL1_1599 PF13439 Glycosyltransferase Family 4 CL1_1601 PF00733 Asparagine synthase CL1_1601 PF13537 Glutamine amidotransferase domain CL1_1603 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CL1_1607 PF02545 Maf-like protein CL1_1608 PF02811 PHP domain CL1_1609 PF01642 Methylmalonyl-CoA mutase CL1_1609 PF02310 B12 binding domain CL1_1611 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CL1_1613 PF06470 SMC proteins Flexible Hinge Domain CL1_1613 PF02463 RecF/RecN/SMC N terminal domain CL1_1616 PF12826 Helix-hairpin-helix motif CL1_1616 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CL1_1616 PF01653 NAD-dependent DNA ligase adenylation domain CL1_1616 PF00533 BRCA1 C Terminus (BRCT) domain CL1_1616 PF03120 NAD-dependent DNA ligase OB-fold domain CL1_1618 PF00270 DEAD/DEAH box helicase CL1_1618 PF00271 Helicase conserved C-terminal domain CL1_1622 PF01884 PcrB family CL1_1626 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CL1_1626 PF02885 Glycosyl transferase family, helical bundle domain CL1_1626 PF00591 Glycosyl transferase family, a/b domain CL1_1629 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CL1_1630 PF01145 SPFH domain / Band 7 family CL1_1630 PF16200 C-terminal region of band_7 CL1_1633 PF00730 HhH-GPD superfamily base excision DNA repair protein CL1_1639 PF04122 Putative cell wall binding repeat 2 CL1_1639 PF01520 N-acetylmuramoyl-L-alanine amidase CL1_1641 PF03746 LamB/YcsF family CL1_1642 PF02682 Carboxyltransferase domain, subdomain C and D CL1_1643 PF02626 Carboxyltransferase domain, subdomain A and B CL1_1645 PF00465 Iron-containing alcohol dehydrogenase CL1_1647 PF00459 Inositol monophosphatase family CL1_1649 PF13307 Helicase C-terminal domain CL1_1649 PF04851 Type III restriction enzyme, res subunit CL1_1653 PF17746 SfsA N-terminal OB domain CL1_1653 PF03749 Sugar fermentation stimulation protein RE domain CL1_1656 PF00589 Phage integrase family CL1_1656 PF02899 Phage integrase, N-terminal SAM-like domain CL1_1658 PF17645 Arylmalonate decarboxylase CL1_1661 PF02926 THUMP domain CL1_1661 PF02568 Thiamine biosynthesis protein (ThiI) CL1_1663 PF02926 THUMP domain CL1_1663 PF02568 Thiamine biosynthesis protein (ThiI) CL1_1664 PF00291 Pyridoxal-phosphate dependent enzyme CL1_1666 PF13607 Succinyl-CoA ligase like flavodoxin domain CL1_1666 PF00583 Acetyltransferase (GNAT) family CL1_1666 PF13380 CoA binding domain CL1_1668 PF01261 Xylose isomerase-like TIM barrel CL1_1673 PF00633 Helix-hairpin-helix motif CL1_1673 PF00730 HhH-GPD superfamily base excision DNA repair protein CL1_1673 PF10576 Iron-sulfur binding domain of endonuclease III CL1_1676 PF00005 ABC transporter CL1_1676 PF13732 Domain of unknown function (DUF4162) CL1_1680 PF00162 Phosphoglycerate kinase CL1_1683 PF00149 Calcineurin-like phosphoesterase CL1_1685 PF00005 ABC transporter CL1_1685 PF08402 TOBE domain CL1_1686 PF00528 Binding-protein-dependent transport system inner membrane component CL1_1690 PF01037 Lrp/AsnC ligand binding domain CL1_1691 PF00271 Helicase conserved C-terminal domain CL1_1691 PF09369 Domain of unknown function (DUF1998) CL1_1691 PF00270 DEAD/DEAH box helicase CL1_1695 PF02361 Cobalt transport protein CL1_1696 PF00005 ABC transporter CL1_1697 PF02632 BioY family CL1_1703 PF00326 Prolyl oligopeptidase family CL1_1703 PF07676 WD40-like Beta Propeller Repeat CL1_1706 PF17176 tRNA-binding domain CL1_1706 PF13718 GNAT acetyltransferase 2 CL1_1706 PF08351 Domain of unknown function (DUF1726) CL1_1706 PF05127 Helicase CL1_1710 PF01699 Sodium/calcium exchanger protein CL1_1711 PF01547 Bacterial extracellular solute-binding protein CL1_1712 PF00152 tRNA synthetases class II (D, K and N) CL1_1712 PF01336 OB-fold nucleic acid binding domain CL1_1713 PF01979 Amidohydrolase family CL1_1715 PF01145 SPFH domain / Band 7 family CL1_1716 PF01434 Peptidase family M41 CL1_1716 PF06480 FtsH Extracellular CL1_1716 PF17862 AAA+ lid domain CL1_1716 PF00004 ATPase family associated with various cellular activities (AAA) CL1_1721 PF03793 PASTA domain CL1_1721 PF00069 Protein kinase domain CL1_1724 PF03793 PASTA domain CL1_1724 PF00069 Protein kinase domain CL1_1725 PF01434 Peptidase family M41 CL1_1725 PF17862 AAA+ lid domain CL1_1725 PF00004 ATPase family associated with various cellular activities (AAA) CL1_1726 PF00069 Protein kinase domain CL1_1726 PF03793 PASTA domain CL1_1727 PF03793 PASTA domain CL1_1727 PF00069 Protein kinase domain CL1_1736 PF01507 Phosphoadenosine phosphosulfate reductase family CL1_1744 PF00334 Nucleoside diphosphate kinase CL1_1746 PF00009 Elongation factor Tu GTP binding domain CL1_1746 PF11987 Translation-initiation factor 2 CL1_1746 PF04760 Translation initiation factor IF-2, N-terminal region CL1_1748 PF01938 TRAM domain CL1_1748 PF05958 tRNA (Uracil-5-)-methyltransferase CL1_1749 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CL1_1749 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CL1_1753 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system CL1_1758 PF01026 TatD related DNase CL1_1761 PF00753 Metallo-beta-lactamase superfamily CL1_1762 PF01546 Peptidase family M20/M25/M40 CL1_1762 PF07687 Peptidase dimerisation domain CL1_1766 PF00270 DEAD/DEAH box helicase CL1_1766 PF00271 Helicase conserved C-terminal domain CL1_1766 PF08494 DEAD/H associated CL1_1769 PF07690 Major Facilitator Superfamily CL1_1770 PF00465 Iron-containing alcohol dehydrogenase CL1_1772 PF01008 Initiation factor 2 subunit family CL1_1777 PF10397 Adenylosuccinate lyase C-terminus CL1_1777 PF00206 Lyase CL1_1779 PF02001 Protein of unknown function DUF134 CL1_1790 PF10609 NUBPL iron-transfer P-loop NTPase CL1_1790 PF01883 Iron-sulfur cluster assembly protein CL1_1791 PF10609 NUBPL iron-transfer P-loop NTPase CL1_1795 PF16363 GDP-mannose 4,6 dehydratase CL1_1796 PF00709 Adenylosuccinate synthetase CL1_1798 PF12146 Serine aminopeptidase, S33 CL1_1802 PF02374 Anion-transporting ATPase CL1_1802 PF17886 HSP20-like domain found in ArsA CL1_1804 PF13722 5TM C-terminal transporter carbon starvation CstA CL1_1804 PF02554 Carbon starvation protein CstA CL1_1805 PF02436 Conserved carboxylase domain CL1_1805 PF00364 Biotin-requiring enzyme CL1_1805 PF00682 HMGL-like CL1_1806 PF01791 DeoC/LacD family aldolase CL1_1807 PF03099 Biotin/lipoate A/B protein ligase family CL1_1807 PF08279 HTH domain CL1_1807 PF02237 Biotin protein ligase C terminal domain CL1_1808 PF00375 Sodium:dicarboxylate symporter family CL1_1810 PF02272 DHHA1 domain CL1_1810 PF01411 tRNA synthetases class II (A) CL1_1810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CL1_1811 PF00271 Helicase conserved C-terminal domain CL1_1811 PF18019 HD domain CL1_1811 PF00270 DEAD/DEAH box helicase CL1_1813 PF09827 CRISPR associated protein Cas2 CL1_1814 PF01867 CRISPR associated protein Cas1 CL1_1821 PF00155 Aminotransferase class I and II CL1_1822 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CL1_1822 PF01502 Phosphoribosyl-AMP cyclohydrolase CL1_1823 PF00977 Histidine biosynthesis protein CL1_1824 PF00977 Histidine biosynthesis protein CL1_1825 PF00117 Glutamine amidotransferase class-I CL1_1826 PF00475 Imidazoleglycerol-phosphate dehydratase CL1_1827 PF00815 Histidinol dehydrogenase CL1_1828 PF01634 ATP phosphoribosyltransferase CL1_1834 PF00005 ABC transporter CL1_1840 PF01880 Desulfoferrodoxin CL1_1841 PF00301 Rubredoxin CL1_1842 PF02915 Rubrerythrin CL1_1843 PF00258 Flavodoxin CL1_1843 PF00753 Metallo-beta-lactamase superfamily CL1_1843 PF00301 Rubredoxin CL1_1845 PF02683 Cytochrome C biogenesis protein transmembrane region CL1_1845 PF11412 Disulphide bond corrector protein DsbC CL1_1846 PF00881 Nitroreductase family CL1_1849 PF03600 Citrate transporter CL1_1850 PF01022 Bacterial regulatory protein, arsR family CL1_1851 PF00403 Heavy-metal-associated domain CL1_1853 PF13302 Acetyltransferase (GNAT) domain CL1_1857 PF00005 ABC transporter CL1_1862 PF10417 C-terminal domain of 1-Cys peroxiredoxin CL1_1862 PF00578 AhpC/TSA family CL1_1863 PF01568 Molydopterin dinucleotide binding domain CL1_1863 PF00384 Molybdopterin oxidoreductase CL1_1863 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CL1_1869 PF00464 Serine hydroxymethyltransferase CL1_1871 PF02146 Sir2 family CL1_1873 PF13419 Haloacid dehalogenase-like hydrolase CL1_1877 PF07690 Major Facilitator Superfamily CL1_1878 PF07690 Major Facilitator Superfamily CL1_1880 PF01523 Putative modulator of DNA gyrase CL1_1883 PF01177 Asp/Glu/Hydantoin racemase CL1_1884 PF05552 Conserved TM helix CL1_1884 PF00924 Mechanosensitive ion channel CL1_1885 PF02441 Flavoprotein CL1_1885 PF04127 DNA / pantothenate metabolism flavoprotein CL1_1886 PF02641 Uncharacterized ACR, COG1993 CL1_1887 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CL1_1888 PF00999 Sodium/hydrogen exchanger family CL1_1895 PF00578 AhpC/TSA family CL1_1896 PF00391 PEP-utilising enzyme, mobile domain CL1_1896 PF00224 Pyruvate kinase, barrel domain CL1_1896 PF02887 Pyruvate kinase, alpha/beta domain CL1_1898 PF13520 Amino acid permease CL1_1899 PF05191 Adenylate kinase, active site lid CL1_1902 PF01910 Thiamine-binding protein CL1_1905 PF01380 SIS domain CL1_1910 PF01351 Ribonuclease HII CL1_1912 PF00005 ABC transporter CL1_1920 PF12102 Domain of unknown function (DUF3578) CL1_1920 PF07728 AAA domain (dynein-related subfamily) CL1_1922 PF02649 Type I GTP cyclohydrolase folE2 CL1_1927 PF00005 ABC transporter CL1_1928 PF01966 HD domain CL1_1929 PF03144 Elongation factor Tu domain 2 CL1_1929 PF03764 Elongation factor G, domain IV CL1_1929 PF00679 Elongation factor G C-terminus CL1_1929 PF14492 Elongation Factor G, domain II CL1_1929 PF00009 Elongation factor Tu GTP binding domain CL1_1931 PF03144 Elongation factor Tu domain 2 CL1_1931 PF00009 Elongation factor Tu GTP binding domain CL1_1931 PF03143 Elongation factor Tu C-terminal domain CL1_1932 PF00338 Ribosomal protein S10p/S20e CL1_1933 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CL1_1933 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CL1_1942 PF00149 Calcineurin-like phosphoesterase CL1_1946 PF00586 AIR synthase related protein, N-terminal domain CL1_1946 PF02769 AIR synthase related protein, C-terminal domain CL1_1948 PF00005 ABC transporter CL1_1953 PF18211 Csm1 subunit domain B CL1_1955 PF03787 RAMP superfamily CL1_1957 PF03787 RAMP superfamily CL1_1959 PF09620 CRISPR-associated protein (Cas_csx3) CL1_1960 PF09827 CRISPR associated protein Cas2 CL1_1961 PF01867 CRISPR associated protein Cas1 CL1_1965 PF01205 Uncharacterized protein family UPF0029 CL1_1965 PF09186 Domain of unknown function (DUF1949) CL1_1971 PF00535 Glycosyl transferase family 2 CL1_1972 PF02548 Ketopantoate hydroxymethyltransferase CL1_1976 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CL1_1976 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CL1_1976 PF01189 16S rRNA methyltransferase RsmB/F CL1_1978 PF01139 tRNA-splicing ligase RtcB CL1_1978 PF01139 tRNA-splicing ligase RtcB CL1_1981 PF00005 ABC transporter CL1_1982 PF01967 MoaC family CL1_1985 PF00488 MutS domain V CL1_1985 PF01624 MutS domain I CL1_1985 PF05188 MutS domain II CL1_1985 PF05190 MutS family domain IV CL1_1985 PF05192 MutS domain III CL1_1989 PF00118 TCP-1/cpn60 chaperonin family CL1_1990 PF01435 Peptidase family M48 CL1_1991 PF01435 Peptidase family M48 CL1_1992 PF01979 Amidohydrolase family CL1_1995 PF04055 Radical SAM superfamily CL1_1996 PF07992 Pyridine nucleotide-disulphide oxidoreductase CL1_1997 PF00857 Isochorismatase family CL1_1999 PF01916 Deoxyhypusine synthase CL1_2003 PF13302 Acetyltransferase (GNAT) domain CL1_2005 PF01966 HD domain CL1_2010 PF03453 MoeA N-terminal region (domain I and II) CL1_2010 PF00994 Probable molybdopterin binding domain CL1_2010 PF03454 MoeA C-terminal region (domain IV) CL1_2011 PF00994 Probable molybdopterin binding domain CL1_2014 PF07685 CobB/CobQ-like glutamine amidotransferase domain CL1_2019 PF02654 Cobalamin-5-phosphate synthase CL1_2022 PF03167 Uracil DNA glycosylase superfamily CL1_2023 PF03186 CobD/Cbib protein CL1_2024 PF00155 Aminotransferase class I and II CL1_2025 PF13649 Methyltransferase domain CL1_2026 PF08264 Anticodon-binding domain of tRNA CL1_2026 PF10458 Valyl tRNA synthetase tRNA binding arm CL1_2026 PF00133 tRNA synthetases class I (I, L, M and V) CL1_2029 PF13635 Domain of unknown function (DUF4143) CL1_2029 PF13173 AAA domain CL1_2031 PF01523 Putative modulator of DNA gyrase CL1_2035 PF01177 Asp/Glu/Hydantoin racemase CL1_2036 PF06071 Protein of unknown function (DUF933) CL1_2036 PF01926 50S ribosome-binding GTPase CL1_2038 PF13404 AsnC-type helix-turn-helix domain CL1_2038 PF01037 Lrp/AsnC ligand binding domain CL1_2039 PF02441 Flavoprotein