A3L09_00015	PF01513	ATP-NAD kinase
A3L09_00020	PF03706	A3L09_00020
A3L09_00025	PF01189	NOL1/NOP2/sun family
A3L09_00025	PF01472	PUA domain
A3L09_00030	PF11447	Protein of unknown function (DUF3201)
A3L09_00035	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_00040	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_00045	PF01946	Thi4 family
A3L09_00050	PF00571	CBS domain
A3L09_00055	PF00999	Sodium/hydrogen exchanger family
A3L09_00060	PF00999	Sodium/hydrogen exchanger family
A3L09_00065	PF01914	A3L09_00065
A3L09_00070	PF03129	Anticodon binding domain
A3L09_00070	PF13393	Histidyl-tRNA synthetase
A3L09_00085	PF14947	Winged helix-turn-helix
A3L09_00090	PF12389	A3L09_00090
A3L09_00095	PF12389	A3L09_00095
A3L09_00110	PF00717	Peptidase S24-like
A3L09_00115	PF17231	A3L09_00115
A3L09_00120	PF01411	tRNA synthetases class II (A)
A3L09_00120	PF02272	DHHA1 domain
A3L09_00120	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L09_00140	PF00121	Triosephosphate isomerase
A3L09_00140	PF05690	Thiazole biosynthesis protein ThiG
A3L09_00145	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
A3L09_00160	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
A3L09_00170	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_00185	PF00717	Peptidase S24-like
A3L09_00190	PF04407	A3L09_00190
A3L09_00200	PF01244	Membrane dipeptidase (Peptidase family M19)
A3L09_00205	PF06745	KaiC
A3L09_00210	PF08241	Methyltransferase domain
A3L09_00220	PF01970	A3L09_00220
A3L09_00230	PF01336	OB-fold nucleic acid binding domain
A3L09_00240	PF00326	Prolyl oligopeptidase family
A3L09_00255	PF01037	AsnC family
A3L09_00265	PF01865	Protein of unknown function DUF47
A3L09_00270	PF01384	A3L09_00270
A3L09_00275	PF00696	Amino acid kinase family
A3L09_00280	PF13450	NAD(P)-binding Rossmann-like domain
A3L09_00285	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L09_00285	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L09_00290	PF01950	Fructose-1,6-bisphosphatase
A3L09_00305	PF12844	Helix-turn-helix domain
A3L09_00310	PF02006	Protein of unknown function DUF137
A3L09_00315	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L09_00320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_00320	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L09_00335	PF12706	Beta-lactamase superfamily domain
A3L09_00340	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
A3L09_00340	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
A3L09_00345	PF13370	4Fe-4S single cluster domain
A3L09_00350	PF01883	Domain of unknown function DUF59
A3L09_00360	PF01861	Protein of unknown function DUF43
A3L09_00370	PF00082	Subtilase family
A3L09_00370	PF04151	Bacterial pre-peptidase C-terminal domain
A3L09_00375	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
A3L09_00385	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L09_00385	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_00390	PF00696	Amino acid kinase family
A3L09_00400	PF01180	Dihydroorotate dehydrogenase
A3L09_00405	PF04014	Antidote-toxin recognition MazE
A3L09_00410	PF01850	PIN domain
A3L09_00415	PF06508	Queuosine biosynthesis protein QueC
A3L09_00420	PF00005	ABC transporter
A3L09_00450	PF01937	Protein of unknown function DUF89
A3L09_00455	PF05559	A3L09_00455
A3L09_00460	PF02195	ParB-like nuclease domain
A3L09_00470	PF05763	A3L09_00470
A3L09_00475	PF00574	Clp protease
A3L09_00475	PF01957	NfeD-like C-terminal, partner-binding
A3L09_00480	PF01145	SPFH domain / Band 7 family
A3L09_00485	PF00156	Phosphoribosyl transferase domain
A3L09_00490	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_00500	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L09_00505	PF01037	AsnC family
A3L09_00505	PF13412	Winged helix-turn-helix DNA-binding
A3L09_00510	PF00005	ABC transporter
A3L09_00515	PF12698	ABC-2 family transporter protein
A3L09_00530	PF06808	A3L09_00530
A3L09_00535	PF08905	A3L09_00535
A3L09_00540	PF16868	A3L09_00540
A3L09_00545	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L09_00545	PF01380	SIS domain
A3L09_00550	PF00300	Histidine phosphatase superfamily (branch 1)
A3L09_00560	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_00570	PF14336	Domain of unknown function (DUF4392)
A3L09_00575	PF01966	HD domain
A3L09_00580	PF13184	NusA-like KH domain
A3L09_00585	PF00152	tRNA synthetases class II (D, K and N)
A3L09_00585	PF01336	OB-fold nucleic acid binding domain
A3L09_00595	PF01981	Peptidyl-tRNA hydrolase PTH2
A3L09_00600	PF13175	AAA ATPase domain
A3L09_00600	PF13304	AAA domain
A3L09_00610	PF01142	tRNA pseudouridine synthase D (TruD)
A3L09_00615	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
A3L09_00620	PF01200	Ribosomal protein S28e
A3L09_00625	PF01246	Ribosomal protein L24e
A3L09_00650	PF00005	ABC transporter
A3L09_00655	PF00334	Nucleoside diphosphate kinase
A3L09_00665	PF00009	Elongation factor Tu GTP binding domain
A3L09_00665	PF03144	Elongation factor Tu domain 2
A3L09_00665	PF11987	Translation-initiation factor 2
A3L09_00665	PF14578	Elongation factor Tu domain 4
A3L09_00695	PF01637	Archaeal ATPase
A3L09_00695	PF03008	A3L09_00695
A3L09_00695	PF09339	IclR helix-turn-helix domain
A3L09_00700	PF02475	Met-10+ like-protein
A3L09_00700	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L09_00705	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L09_00705	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L09_00710	PF00294	pfkB family carbohydrate kinase
A3L09_00715	PF00293	NUDIX domain
A3L09_00720	PF04430	Protein of unknown function (DUF498/DUF598)
A3L09_00725	PF05048	Periplasmic copper-binding protein (NosD)
A3L09_00740	PF03833	DNA polymerase II large subunit DP2
A3L09_00740	PF14528	LAGLIDADG-like domain
A3L09_00740	PF14890	Intein splicing domain
A3L09_00745	PF04042	DNA polymerase alpha/epsilon subunit B
A3L09_00750	PF09079	CDC6, C terminal
A3L09_00750	PF13191	AAA ATPase domain
A3L09_00755	PF02254	TrkA-N domain
A3L09_00755	PF07885	Ion channel
A3L09_00760	PF08423	Rad51
A3L09_00760	PF14520	Helix-hairpin-helix domain
A3L09_00765	PF01939	Protein of unknown function DUF91
A3L09_00770	PF04322	A3L09_00770
A3L09_00775	PF09754	PAC2 family
A3L09_00780	PF01048	Phosphorylase superfamily
A3L09_00785	PF00565	Staphylococcal nuclease homologue
A3L09_00790	PF01979	Amidohydrolase family
A3L09_00800	PF00294	pfkB family carbohydrate kinase
A3L09_00805	PF16999	A3L09_00805
A3L09_00810	PF01496	V-type ATPase 116kDa subunit family
A3L09_00815	PF00137	ATP synthase subunit C
A3L09_00820	PF01991	ATP synthase (E/31 kDa) subunit
A3L09_00825	PF01992	ATP synthase (C/AC39) subunit
A3L09_00830	PF01990	ATP synthase (F/14-kDa) subunit
A3L09_00835	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L09_00835	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L09_00835	PF16886	A3L09_00835
A3L09_00840	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L09_00840	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L09_00845	PF01813	ATP synthase subunit D
A3L09_00850	PF00753	Metallo-beta-lactamase superfamily
A3L09_00855	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_00860	PF01411	tRNA synthetases class II (A)
A3L09_00860	PF02272	DHHA1 domain
A3L09_00860	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L09_00865	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_00870	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_00875	PF01171	PP-loop family
A3L09_00885	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_00890	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_00895	PF04055	Radical SAM superfamily
A3L09_00910	PF02676	Methyltransferase TYW3
A3L09_00915	PF01850	PIN domain
A3L09_00920	PF01954	Protein of unknown function DUF104
A3L09_00930	PF00005	ABC transporter
A3L09_00945	PF00118	TCP-1/cpn60 chaperonin family
A3L09_00950	PF04055	Radical SAM superfamily
A3L09_00950	PF13353	4Fe-4S single cluster domain
A3L09_00955	PF13597	Anaerobic ribonucleoside-triphosphate reductase
A3L09_00960	PF13424	Tetratricopeptide repeat
A3L09_00965	PF00736	EF-1 guanine nucleotide exchange domain
A3L09_00970	PF07754	A3L09_00970
A3L09_00975	PF01037	AsnC family
A3L09_00975	PF13412	Winged helix-turn-helix DNA-binding
A3L09_00980	PF01725	Ham1 family
A3L09_00985	PF04008	Adenosine specific kinase
A3L09_01000	PF02391	MoaE protein
A3L09_01010	PF00899	ThiF family
A3L09_01015	PF01791	DeoC/LacD family aldolase
A3L09_01020	PF08967	Domain of unknown function (DUF1884)
A3L09_01030	PF00202	Aminotransferase class-III
A3L09_01035	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_01040	PF04307	A3L09_01040
A3L09_01050	PF02926	THUMP domain
A3L09_01055	PF02697	A3L09_01055
A3L09_01065	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
A3L09_01070	PF00294	pfkB family carbohydrate kinase
A3L09_01080	PF01882	A3L09_01080
A3L09_01085	PF07726	ATPase family associated with various cellular activities (AAA)
A3L09_01095	PF13559	A3L09_01095
A3L09_01100	PF09891	Uncharacterized protein conserved in archaea (DUF2118)
A3L09_01105	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A3L09_01110	PF00482	Type II secretion system (T2SS), protein F
A3L09_01115	PF00482	Type II secretion system (T2SS), protein F
A3L09_01120	PF00437	Type II/IV secretion system protein
A3L09_01120	PF14528	LAGLIDADG-like domain
A3L09_01120	PF14890	Intein splicing domain
A3L09_01130	PF04415	A3L09_01130
A3L09_01140	PF01926	50S ribosome-binding GTPase
A3L09_01145	PF01170	Putative RNA methylase family UPF0020
A3L09_01145	PF02926	THUMP domain
A3L09_01150	PF01557	Fumarylacetoacetate (FAA) hydrolase family
A3L09_01155	PF01433	Peptidase family M1
A3L09_01160	PF00579	tRNA synthetases class I (W and Y)
A3L09_01165	PF00892	EamA-like transporter family
A3L09_01170	PF12706	Beta-lactamase superfamily domain
A3L09_01175	PF02540	NAD synthase
A3L09_01180	PF01938	TRAM domain
A3L09_01185	PF02597	ThiS family
A3L09_01205	PF00113	Enolase, C-terminal TIM barrel domain
A3L09_01205	PF03952	Enolase, N-terminal domain
A3L09_01210	PF03551	Transcriptional regulator PadR-like family
A3L09_01215	PF03176	MMPL family
A3L09_01220	PF04055	Radical SAM superfamily
A3L09_01225	PF01546	Peptidase family M20/M25/M40
A3L09_01225	PF07687	Peptidase dimerisation domain
A3L09_01230	PF04473	Transglutaminase-like domain
A3L09_01245	PF00596	Class II Aldolase and Adducin N-terminal domain
A3L09_01250	PF03685	Uncharacterised protein family (UPF0147)
A3L09_01255	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
A3L09_01260	PF05763	A3L09_01260
A3L09_01265	PF00583	Acetyltransferase (GNAT) family
A3L09_01265	PF04055	Radical SAM superfamily
A3L09_01265	PF16199	A3L09_01265
A3L09_01270	PF01784	NIF3 (NGG1p interacting factor 3)
A3L09_01275	PF01467	Cytidylyltransferase
A3L09_01280	PF05763	A3L09_01280
A3L09_01285	PF00814	Glycoprotease family
A3L09_01295	PF01926	50S ribosome-binding GTPase
A3L09_01295	PF13167	A3L09_01295
A3L09_01295	PF16360	A3L09_01295
A3L09_01300	PF01384	A3L09_01300
A3L09_01305	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L09_01310	PF14697	4Fe-4S dicluster domain
A3L09_01315	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L09_01315	PF17147	A3L09_01315
A3L09_01320	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L09_01325	PF14697	4Fe-4S dicluster domain
A3L09_01330	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L09_01330	PF17147	A3L09_01330
A3L09_01335	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L09_01345	PF13247	4Fe-4S dicluster domain
A3L09_01350	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_01355	PF12838	4Fe-4S dicluster domain
A3L09_01360	PF03063	Prismane/CO dehydrogenase family
A3L09_01365	PF12837	4Fe-4S binding domain
A3L09_01365	PF13247	4Fe-4S dicluster domain
A3L09_01370	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_01375	PF00753	Metallo-beta-lactamase superfamily
A3L09_01390	PF00210	Ferritin-like domain
A3L09_01395	PF01370	NAD dependent epimerase/dehydratase family
A3L09_01400	PF08241	Methyltransferase domain
A3L09_01405	PF01209	ubiE/COQ5 methyltransferase family
A3L09_01410	PF00005	ABC transporter
A3L09_01420	PF09084	NMT1/THI5 like
A3L09_01425	PF01040	UbiA prenyltransferase family
A3L09_01430	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
A3L09_01435	PF00005	ABC transporter
A3L09_01440	PF12724	Flavodoxin domain
A3L09_01445	PF01032	FecCD transport family
A3L09_01455	PF01497	Periplasmic binding protein
A3L09_01460	PF04055	Radical SAM superfamily
A3L09_01460	PF13186	Iron-sulfur cluster-binding domain
A3L09_01460	PF13353	4Fe-4S single cluster domain
A3L09_01465	PF02322	A3L09_01465
A3L09_01470	PF01654	A3L09_01470
A3L09_01480	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_01485	PF07849	A3L09_01485
A3L09_01490	PF00762	Ferrochelatase
A3L09_01505	PF00348	Polyprenyl synthetase
A3L09_01510	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_01515	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_01520	PF04066	A3L09_01520
A3L09_01525	PF03334	A3L09_01525
A3L09_01530	PF13244	A3L09_01530
A3L09_01535	PF04039	A3L09_01535
A3L09_01540	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L09_01545	PF01899	A3L09_01545
A3L09_01550	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_01555	PF01258	Prokaryotic dksA/traR C4-type zinc finger
A3L09_01555	PF02663	FmdE, Molybdenum formylmethanofuran dehydrogenase operon
A3L09_01560	PF01497	Periplasmic binding protein
A3L09_01565	PF01032	FecCD transport family
A3L09_01570	PF00005	ABC transporter
A3L09_01575	PF10609	ParA/MinD ATPase like
A3L09_01585	PF09883	A3L09_01585
A3L09_01590	PF02002	TFIIE alpha subunit
A3L09_01595	PF01661	Macro domain
A3L09_01610	PF01256	Carbohydrate kinase
A3L09_01610	PF03853	YjeF-related protein N-terminus
A3L09_01615	PF00128	Alpha amylase, catalytic domain
A3L09_01615	PF09154	Domain of unknown function (DUF1939)
A3L09_01620	PF12840	Helix-turn-helix domain
A3L09_01625	PF02680	Uncharacterized ArCR, COG1888
A3L09_01630	PF12840	Helix-turn-helix domain
A3L09_01635	PF13380	CoA binding domain
A3L09_01635	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L09_01645	PF01899	A3L09_01645
A3L09_01650	PF04066	A3L09_01650
A3L09_01655	PF03334	A3L09_01655
A3L09_01660	PF13244	A3L09_01660
A3L09_01670	PF04039	A3L09_01670
A3L09_01675	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L09_01680	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_01680	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A3L09_01690	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L09_01695	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L09_01700	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L09_01700	PF00374	Nickel-dependent hydrogenase
A3L09_01705	PF00146	NADH dehydrogenase
A3L09_01710	PF13187	4Fe-4S dicluster domain
A3L09_01715	PF02915	Rubrerythrin
A3L09_01720	PF02915	Rubrerythrin
A3L09_01725	PF04266	ASCH domain
A3L09_01730	PF01494	FAD binding domain
A3L09_01735	PF01470	Pyroglutamyl peptidase
A3L09_01745	PF04312	A3L09_01745
A3L09_01755	PF13601	Winged helix DNA-binding domain
A3L09_01775	PF01171	PP-loop family
A3L09_01785	PF02163	Peptidase family M50
A3L09_01785	PF13180	PDZ domain
A3L09_01790	PF00534	Glycosyl transferases group 1
A3L09_01790	PF13439	Glycosyltransferase Family 4
A3L09_01795	PF00535	Glycosyl transferase family 2
A3L09_01800	PF00483	Nucleotidyl transferase
A3L09_01805	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
A3L09_01805	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
A3L09_01805	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
A3L09_01810	PF00535	Glycosyl transferase family 2
A3L09_01815	PF00535	Glycosyl transferase family 2
A3L09_01820	PF00106	short chain dehydrogenase
A3L09_01820	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
A3L09_01825	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
A3L09_01830	PF01943	A3L09_01830
A3L09_01830	PF14667	Polysaccharide biosynthesis C-terminal domain
A3L09_01835	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L09_01835	PF00483	Nucleotidyl transferase
A3L09_01840	PF01370	NAD dependent epimerase/dehydratase family
A3L09_01845	PF12389	A3L09_01845
A3L09_01850	PF01545	Cation efflux family
A3L09_01850	PF16916	A3L09_01850
A3L09_01855	PF00282	Pyridoxal-dependent decarboxylase conserved domain
A3L09_01860	PF00999	Sodium/hydrogen exchanger family
A3L09_01865	PF01998	A3L09_01865
A3L09_01870	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_01880	PF03065	Glycosyl hydrolase family 57
A3L09_01880	PF09094	Domain of unknown function (DUF1925)
A3L09_01880	PF09095	Domain of unknown function (DUF1926)
A3L09_01885	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_01890	PF01171	PP-loop family
A3L09_01895	PF01864	A3L09_01895
A3L09_01900	PF00919	Uncharacterized protein family UPF0004
A3L09_01900	PF04055	Radical SAM superfamily
A3L09_01910	PF10102	A3L09_01910
A3L09_01915	PF00717	Peptidase S24-like
A3L09_01920	PF07883	Cupin domain
A3L09_01925	PF02915	Rubrerythrin
A3L09_01940	PF01472	PUA domain
A3L09_01945	PF11848	A3L09_01945
A3L09_01950	PF03683	A3L09_01950
A3L09_01955	PF09876	A3L09_01955
A3L09_01960	PF04252	A3L09_01960
A3L09_01965	PF05362	Lon protease (S16) C-terminal proteolytic domain
A3L09_01975	PF03600	Citrate transporter
A3L09_01980	PF00582	Universal stress protein family
A3L09_01985	PF01523	Putative modulator of DNA gyrase
A3L09_01990	PF01523	Putative modulator of DNA gyrase
A3L09_01995	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_02000	PF00128	Alpha amylase, catalytic domain
A3L09_02005	PF09851	A3L09_02005
A3L09_02005	PF14470	Bacterial PH domain
A3L09_02010	PF03437	BtpA family
A3L09_02040	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L09_02040	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L09_02040	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L09_02040	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L09_02045	PF00892	EamA-like transporter family
A3L09_02050	PF05763	A3L09_02050
A3L09_02065	PF13238	AAA domain
A3L09_02075	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
A3L09_02075	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
A3L09_02080	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A3L09_02080	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A3L09_02085	PF10120	Putative aldolase
A3L09_02095	PF01894	Uncharacterised protein family UPF0047
A3L09_02100	PF13396	A3L09_02100
A3L09_02105	PF02492	CobW/HypB/UreG, nucleotide-binding domain
A3L09_02110	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
A3L09_02115	PF00291	Pyridoxal-phosphate dependent enzyme
A3L09_02120	PF13699	A3L09_02120
A3L09_02125	PF13483	Beta-lactamase superfamily domain
A3L09_02130	PF08423	Rad51
A3L09_02135	PF04167	Protein of unknown function (DUF402)
A3L09_02135	PF10150	Ribonuclease E/G family
A3L09_02145	PF04055	Radical SAM superfamily
A3L09_02145	PF06463	Molybdenum Cofactor Synthesis C
A3L09_02145	PF13353	4Fe-4S single cluster domain
A3L09_02150	PF02475	Met-10+ like-protein
A3L09_02155	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_02160	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_02160	PF08542	Replication factor C C-terminal domain
A3L09_02170	PF00155	Aminotransferase class I and II
A3L09_02180	PF01974	tRNA intron endonuclease, catalytic C-terminal domain
A3L09_02180	PF02778	tRNA intron endonuclease, N-terminal domain
A3L09_02185	PF00583	Acetyltransferase (GNAT) family
A3L09_02190	PF01032	FecCD transport family
A3L09_02195	PF00005	ABC transporter
A3L09_02200	PF00227	Proteasome subunit
A3L09_02205	PF07758	A3L09_02205
A3L09_02210	PF00156	Phosphoribosyl transferase domain
A3L09_02210	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
A3L09_02230	PF03031	NLI interacting factor-like phosphatase
A3L09_02235	PF04017	Domain of unknown function (DUF366)
A3L09_02250	PF01921	tRNA synthetases class I (K)
A3L09_02255	PF13649	Methyltransferase domain
A3L09_02265	PF07318	A3L09_02265
A3L09_02270	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L09_02280	PF01230	HIT domain
A3L09_02290	PF00227	Proteasome subunit
A3L09_02290	PF10584	Proteasome subunit A N-terminal signature
A3L09_02295	PF01172	Shwachman-Bodian-Diamond syndrome (SBDS) protein
A3L09_02295	PF09377	SBDS protein C-terminal domain
A3L09_02300	PF14382	Exosome complex exonuclease RRP4 N-terminal region
A3L09_02300	PF15985	A3L09_02300
A3L09_02305	PF01138	3' exoribonuclease family, domain 1
A3L09_02305	PF03725	3' exoribonuclease family, domain 2
A3L09_02310	PF01138	3' exoribonuclease family, domain 1
A3L09_02310	PF03725	3' exoribonuclease family, domain 2
A3L09_02315	PF04472	Protein of unknown function (DUF552)
A3L09_02320	PF03367	ZPR1 zinc-finger domain
A3L09_02325	PF04266	ASCH domain
A3L09_02335	PF00742	Homoserine dehydrogenase
A3L09_02335	PF03447	Homoserine dehydrogenase, NAD binding domain
A3L09_02340	PF00571	CBS domain
A3L09_02345	PF03977	A3L09_02345
A3L09_02350	PF00364	Biotin-requiring enzyme
A3L09_02355	PF04277	A3L09_02355
A3L09_02360	PF01039	Carboxyl transferase domain
A3L09_02365	PF01873	Domain found in IF2B/IF5
A3L09_02370	PF00493	MCM2/3/5 family
A3L09_02370	PF14551	MCM N-terminal domain
A3L09_02370	PF14890	Intein splicing domain
A3L09_02370	PF17207	A3L09_02370
A3L09_02375	PF05916	GINS complex protein
A3L09_02380	PF12850	Calcineurin-like phosphoesterase superfamily domain
A3L09_02395	PF01137	RNA 3'-terminal phosphate cyclase
A3L09_02395	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
A3L09_02400	PF01841	Transglutaminase-like superfamily
A3L09_02400	PF13559	A3L09_02400
A3L09_02410	PF07726	ATPase family associated with various cellular activities (AAA)
A3L09_02415	PF01882	A3L09_02415
A3L09_02425	PF01026	TatD related DNase
A3L09_02435	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_02440	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_02450	PF00152	tRNA synthetases class II (D, K and N)
A3L09_02455	PF00437	Type II/IV secretion system protein
A3L09_02465	PF00266	Aminotransferase class-V
A3L09_02470	PF00005	ABC transporter
A3L09_02470	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_02475	PF00005	ABC transporter
A3L09_02475	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_02480	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_02485	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_02490	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L09_02495	PF00232	Glycosyl hydrolase family 1
A3L09_02510	PF07690	Major Facilitator Superfamily
A3L09_02515	PF00252	Ribosomal protein L16p/L10e
A3L09_02520	PF09414	RNA ligase
A3L09_02525	PF13173	AAA domain
A3L09_02530	PF02598	Putative RNA methyltransferase
A3L09_02535	PF00297	Ribosomal protein L3
A3L09_02540	PF00573	Ribosomal protein L4/L1 family
A3L09_02545	PF00276	Ribosomal protein L23
A3L09_02550	PF00181	Ribosomal Proteins L2, RNA binding domain
A3L09_02550	PF03947	Ribosomal Proteins L2, C-terminal domain
A3L09_02555	PF00203	Ribosomal protein S19
A3L09_02560	PF00237	Ribosomal protein L22p/L17e
A3L09_02565	PF00189	Ribosomal protein S3, C-terminal domain
A3L09_02565	PF07650	KH domain
A3L09_02570	PF00831	Ribosomal L29 protein
A3L09_02575	PF01253	Translation initiation factor SUI1
A3L09_02580	PF01868	Domain of unknown function UPF0086
A3L09_02585	PF00366	Ribosomal protein S17
A3L09_02590	PF00238	Ribosomal protein L14p/L23e
A3L09_02595	PF00467	KOW motif
A3L09_02595	PF16906	A3L09_02595
A3L09_02600	PF00900	Ribosomal family S4e
A3L09_02600	PF01479	S4 domain
A3L09_02600	PF08071	RS4NT (NUC023) domain
A3L09_02605	PF00281	Ribosomal protein L5
A3L09_02605	PF00673	ribosomal L5P family C-terminus
A3L09_02610	PF00253	Ribosomal protein S14p/S29e
A3L09_02615	PF00410	Ribosomal protein S8
A3L09_02620	PF00347	Ribosomal protein L6
A3L09_02625	PF01655	Ribosomal protein L32
A3L09_02630	PF01280	Ribosomal protein L19e
A3L09_02635	PF14204	Ribosomal L18 C-terminal region
A3L09_02635	PF17144	A3L09_02635
A3L09_02640	PF00333	Ribosomal protein S5, N-terminal domain
A3L09_02640	PF03719	Ribosomal protein S5, C-terminal domain
A3L09_02645	PF00327	Ribosomal protein L30p/L7e
A3L09_02650	PF00828	Ribosomal protein L18e/L15
A3L09_02655	PF00344	SecY translocase
A3L09_02655	PF10559	Plug domain of Sec61p
A3L09_02660	PF13207	AAA domain
A3L09_02665	PF01956	A3L09_02665
A3L09_02670	PF01199	Ribosomal protein L34e
A3L09_02675	PF13189	Cytidylate kinase-like family
A3L09_02680	PF01929	Ribosomal protein L14
A3L09_02685	PF01472	PUA domain
A3L09_02685	PF01509	TruB family pseudouridylate synthase (N terminal domain)
A3L09_02685	PF08068	DKCLD (NUC011) domain
A3L09_02685	PF16198	A3L09_02685
A3L09_02690	PF03235	A3L09_02690
A3L09_02690	PF07510	A3L09_02690
A3L09_02700	PF05175	Methyltransferase small domain
A3L09_02710	PF00416	Ribosomal protein S13/S18
A3L09_02715	PF01479	S4 domain
A3L09_02720	PF00411	Ribosomal protein S11
A3L09_02725	PF01000	RNA polymerase Rpb3/RpoA insert domain
A3L09_02725	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
A3L09_02735	PF17135	A3L09_02735
A3L09_02740	PF00572	Ribosomal protein L13
A3L09_02745	PF00380	Ribosomal protein S9/S16
A3L09_02750	PF01194	RNA polymerases N / 8 kDa subunit
A3L09_02760	PF01192	RNA polymerase Rpb6
A3L09_02765	PF00113	Enolase, C-terminal TIM barrel domain
A3L09_02765	PF03952	Enolase, N-terminal domain
A3L09_02770	PF00318	Ribosomal protein S2
A3L09_02785	PF03551	Transcriptional regulator PadR-like family
A3L09_02790	PF04930	A3L09_02790
A3L09_02810	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L09_02810	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_02815	PF01048	Phosphorylase superfamily
A3L09_02830	PF00448	SRP54-type protein, GTPase domain
A3L09_02830	PF02881	SRP54-type protein, helical bundle domain
A3L09_02830	PF02978	Signal peptide binding domain
A3L09_02835	PF01037	AsnC family
A3L09_02840	PF03692	A3L09_02840
A3L09_02845	PF00156	Phosphoribosyl transferase domain
A3L09_02845	PF01381	Helix-turn-helix
A3L09_02855	PF01037	AsnC family
A3L09_02855	PF13412	Winged helix-turn-helix DNA-binding
A3L09_02865	PF00994	Probable molybdopterin binding domain
A3L09_02865	PF03453	MoeA N-terminal region (domain I and II)
A3L09_02865	PF03454	MoeA C-terminal region (domain IV)
A3L09_02870	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_02870	PF09336	Vps4 C terminal oligomerisation domain
A3L09_02875	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L09_02875	PF02403	Seryl-tRNA synthetase N-terminal domain
A3L09_02880	PF01909	Nucleotidyltransferase domain
A3L09_02890	PF01300	Telomere recombination
A3L09_02890	PF03481	Putative GTP-binding controlling metal-binding
A3L09_02895	PF13374	Tetratricopeptide repeat
A3L09_02900	PF00733	Asparagine synthase
A3L09_02900	PF13537	Glutamine amidotransferase domain
A3L09_02905	PF03029	Conserved hypothetical ATP binding protein
A3L09_02910	PF13614	AAA domain
A3L09_02915	PF00437	Type II/IV secretion system protein
A3L09_02920	PF02545	Maf-like protein
A3L09_02925	PF02811	PHP domain
A3L09_02930	PF02310	B12 binding domain
A3L09_02935	PF03308	ArgK protein
A3L09_02940	PF13669	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
A3L09_02945	PF05763	A3L09_02945
A3L09_02955	PF01191	RNA polymerase Rpb5, C-terminal domain
A3L09_02960	PF00562	RNA polymerase Rpb2, domain 6
A3L09_02960	PF04560	RNA polymerase Rpb2, domain 7
A3L09_02960	PF04561	RNA polymerase Rpb2, domain 2
A3L09_02960	PF04563	RNA polymerase beta subunit
A3L09_02960	PF04565	RNA polymerase Rpb2, domain 3
A3L09_02960	PF04566	RNA polymerase Rpb2, domain 4
A3L09_02960	PF04567	RNA polymerase Rpb2, domain 5
A3L09_02965	PF00623	RNA polymerase Rpb1, domain 2
A3L09_02965	PF04983	RNA polymerase Rpb1, domain 3
A3L09_02965	PF04997	RNA polymerase Rpb1, domain 1
A3L09_02965	PF04998	RNA polymerase Rpb1, domain 5
A3L09_02965	PF05000	RNA polymerase Rpb1, domain 4
A3L09_02970	PF04998	RNA polymerase Rpb1, domain 5
A3L09_02975	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
A3L09_02980	PF07650	KH domain
A3L09_02985	PF00164	Ribosomal protein S12/S23
A3L09_02990	PF00177	Ribosomal protein S7p/S5e
A3L09_02995	PF12646	A3L09_02995
A3L09_03000	PF01909	Nucleotidyltransferase domain
A3L09_03010	PF01663	Type I phosphodiesterase / nucleotide pyrophosphatase
A3L09_03015	PF04894	A3L09_03015
A3L09_03015	PF04895	A3L09_03015
A3L09_03020	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L09_03020	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L09_03025	PF02597	ThiS family
A3L09_03030	PF04055	Radical SAM superfamily
A3L09_03030	PF13186	Iron-sulfur cluster-binding domain
A3L09_03030	PF13394	4Fe-4S single cluster domain
A3L09_03045	PF00270	DEAD/DEAH box helicase
A3L09_03045	PF00271	Helicase conserved C-terminal domain
A3L09_03060	PF02223	Thymidylate kinase
A3L09_03065	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L09_03070	PF00821	Phosphoenolpyruvate carboxykinase
A3L09_03070	PF17297	A3L09_03070
A3L09_03075	PF00343	Carbohydrate phosphorylase
A3L09_03075	PF11897	A3L09_03075
A3L09_03085	PF00749	tRNA synthetases class I (E and Q), catalytic domain
A3L09_03085	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
A3L09_03090	PF13662	Toprim domain
A3L09_03095	PF01751	Toprim domain
A3L09_03100	PF02310	B12 binding domain
A3L09_03100	PF04055	Radical SAM superfamily
A3L09_03105	PF00808	Histone-like transcription factor (CBF/NF-Y) and archaeal histone
A3L09_03120	PF00591	Glycosyl transferase family, a/b domain
A3L09_03120	PF02885	Glycosyl transferase family, helical bundle domain
A3L09_03120	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
A3L09_03125	PF00753	Metallo-beta-lactamase superfamily
A3L09_03125	PF07521	RNA-metabolising metallo-beta-lactamase
A3L09_03130	PF00348	Polyprenyl synthetase
A3L09_03150	PF00133	tRNA synthetases class I (I, L, M and V)
A3L09_03150	PF08264	Anticodon-binding domain of tRNA
A3L09_03160	PF00557	Metallopeptidase family M24
A3L09_03160	PF01321	Creatinase/Prolidase N-terminal domain
A3L09_03185	PF01169	A3L09_03185
A3L09_03190	PF00155	Aminotransferase class I and II
A3L09_03200	PF01402	Ribbon-helix-helix protein, copG family
A3L09_03205	PF00091	Tubulin/FtsZ family, GTPase domain
A3L09_03205	PF12327	FtsZ family, C-terminal domain
A3L09_03210	PF13614	AAA domain
A3L09_03220	PF01467	Cytidylyltransferase
A3L09_03225	PF01472	PUA domain
A3L09_03225	PF09183	Domain of unknown function (DUF1947)
A3L09_03230	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L09_03235	PF14544	Domain of unknown function (DUF4443)
A3L09_03240	PF01658	Myo-inositol-1-phosphate synthase
A3L09_03240	PF07994	Myo-inositol-1-phosphate synthase
A3L09_03245	PF01066	CDP-alcohol phosphatidyltransferase
A3L09_03245	PF12804	MobA-like NTP transferase domain
A3L09_03250	PF01902	ATP-binding region
A3L09_03255	PF00582	Universal stress protein family
A3L09_03255	PF13520	Amino acid permease
A3L09_03270	PF04255	Protein of unknown function (DUF433)
A3L09_03280	PF02566	OsmC-like protein
A3L09_03285	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
A3L09_03285	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_03295	PF07690	Major Facilitator Superfamily
A3L09_03300	PF12800	4Fe-4S binding domain
A3L09_03300	PF13247	4Fe-4S dicluster domain
A3L09_03305	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L09_03305	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L09_03310	PF01061	A3L09_03310
A3L09_03315	PF00005	ABC transporter
A3L09_03315	PF13732	A3L09_03315
A3L09_03320	PF01758	Sodium Bile acid symporter family
A3L09_03325	PF00582	Universal stress protein family
A3L09_03330	PF08859	A3L09_03330
A3L09_03340	PF01925	A3L09_03340
A3L09_03345	PF12840	Helix-turn-helix domain
A3L09_03350	PF02579	Dinitrogenase iron-molybdenum cofactor
A3L09_03355	PF01925	A3L09_03355
A3L09_03360	PF03595	Voltage-dependent anion channel
A3L09_03365	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_03375	PF04055	Radical SAM superfamily
A3L09_03375	PF13186	Iron-sulfur cluster-binding domain
A3L09_03375	PF13353	4Fe-4S single cluster domain
A3L09_03380	PF01458	Uncharacterized protein family (UPF0051)
A3L09_03385	PF00005	ABC transporter
A3L09_03395	PF02579	Dinitrogenase iron-molybdenum cofactor
A3L09_03400	PF01545	Cation efflux family
A3L09_03400	PF16916	A3L09_03400
A3L09_03405	PF01155	Hydrogenase expression/synthesis hypA family
A3L09_03410	PF10609	ParA/MinD ATPase like
A3L09_03415	PF01750	Hydrogenase maturation protease
A3L09_03425	PF12804	MobA-like NTP transferase domain
A3L09_03430	PF01455	HupF/HypC family
A3L09_03435	PF01924	Hydrogenase formation hypA family
A3L09_03440	PF00708	Acylphosphatase
A3L09_03440	PF01300	Telomere recombination
A3L09_03440	PF07503	HypF finger
A3L09_03445	PF01909	Nucleotidyltransferase domain
A3L09_03455	PF00586	AIR synthase related protein, N-terminal domain
A3L09_03455	PF02769	AIR synthase related protein, C-terminal domain
A3L09_03460	PF07690	Major Facilitator Superfamily
A3L09_03470	PF06197	A3L09_03470
A3L09_03475	PF01842	ACT domain
A3L09_03480	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_03485	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L09_03490	PF04039	A3L09_03490
A3L09_03500	PF13244	A3L09_03500
A3L09_03505	PF03334	A3L09_03505
A3L09_03510	PF04066	A3L09_03510
A3L09_03515	PF01899	A3L09_03515
A3L09_03520	PF03479	Domain of unknown function (DUF296)
A3L09_03530	PF09828	A3L09_03530
A3L09_03535	PF01242	6-pyruvoyl tetrahydropterin synthase
A3L09_03540	PF14082	A3L09_03540
A3L09_03545	PF01070	FMN-dependent dehydrogenase
A3L09_03550	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L09_03550	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L09_03555	PF00037	4Fe-4S binding domain
A3L09_03555	PF12798	4Fe-4S binding domain
A3L09_03555	PF12800	4Fe-4S binding domain
A3L09_03560	PF00037	4Fe-4S binding domain
A3L09_03560	PF13247	4Fe-4S dicluster domain
A3L09_03565	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_03575	PF14333	A3L09_03575
A3L09_03580	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A3L09_03580	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
A3L09_03590	PF04545	Sigma-70, region 4
A3L09_03590	PF14601	DNA_binding protein, TFX, C-term
A3L09_03595	PF04172	A3L09_03595
A3L09_03600	PF03788	A3L09_03600
A3L09_03605	PF09910	A3L09_03605
A3L09_03610	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_03610	PF00672	HAMP domain
A3L09_03610	PF02743	Cache domain
A3L09_03615	PF11491	Protein of unknown function (DUF3213)
A3L09_03620	PF04055	Radical SAM superfamily
A3L09_03620	PF13353	4Fe-4S single cluster domain
A3L09_03630	PF03167	Uracil DNA glycosylase superfamily
A3L09_03635	PF03553	A3L09_03635
A3L09_03650	PF00291	Pyridoxal-phosphate dependent enzyme
A3L09_03655	PF01876	RNase P subunit p30
A3L09_03660	PF01877	RNA binding
A3L09_03665	PF02632	BioY family
A3L09_03670	PF03099	Biotin/lipoate A/B protein ligase family
A3L09_03670	PF08279	HTH domain
A3L09_03675	PF00005	ABC transporter
A3L09_03680	PF02361	Cobalt transport protein
A3L09_03685	PF00827	Ribosomal L15
A3L09_03695	PF13367	A3L09_03695
A3L09_03720	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L09_03720	PF07892	Protein of unknown function (DUF1667)
A3L09_03725	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_03730	PF01266	FAD dependent oxidoreductase
A3L09_03730	PF04324	BFD-like [2Fe-2S] binding domain
A3L09_03735	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
A3L09_03735	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
A3L09_03740	PF03009	Glycerophosphoryl diester phosphodiesterase family
A3L09_03745	PF03009	Glycerophosphoryl diester phosphodiesterase family
A3L09_03750	PF07690	Major Facilitator Superfamily
A3L09_03755	PF13347	MFS/sugar transport protein
A3L09_03760	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
A3L09_03765	PF12698	ABC-2 family transporter protein
A3L09_03770	PF00005	ABC transporter
A3L09_03770	PF13732	A3L09_03770
A3L09_03775	PF02347	Glycine cleavage system P-protein
A3L09_03780	PF01850	PIN domain
A3L09_03785	PF01954	Protein of unknown function DUF104
A3L09_03790	PF02347	Glycine cleavage system P-protein
A3L09_03795	PF03351	A3L09_03795
A3L09_03800	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_03810	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_03815	PF00005	ABC transporter
A3L09_03820	PF13343	Bacterial extracellular solute-binding protein
A3L09_03825	PF00209	Sodium:neurotransmitter symporter family
A3L09_03835	PF00543	Nitrogen regulatory protein P-II
A3L09_03840	PF03065	Glycosyl hydrolase family 57
A3L09_03840	PF09210	Domain of unknown function (DUF1957)
A3L09_03840	PF14520	Helix-hairpin-helix domain
A3L09_03850	PF01973	A3L09_03850
A3L09_03855	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L09_03860	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_03865	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_03870	PF00005	ABC transporter
A3L09_03870	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_03875	PF00005	ABC transporter
A3L09_03875	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_03880	PF01927	A3L09_03880
A3L09_03885	PF12706	Beta-lactamase superfamily domain
A3L09_03895	PF00881	Nitroreductase family
A3L09_03900	PF00782	Dual specificity phosphatase, catalytic domain
A3L09_03905	PF01588	Putative tRNA binding domain
A3L09_03910	PF00795	Carbon-nitrogen hydrolase
A3L09_03930	PF02517	CAAX protease self-immunity
A3L09_03945	PF00583	Acetyltransferase (GNAT) family
A3L09_03965	PF02517	CAAX protease self-immunity
A3L09_03970	PF13601	Winged helix DNA-binding domain
A3L09_03980	PF00583	Acetyltransferase (GNAT) family
A3L09_03985	PF07690	Major Facilitator Superfamily
A3L09_03990	PF00005	ABC transporter
A3L09_03990	PF00664	ABC transporter transmembrane region
A3L09_03995	PF00005	ABC transporter
A3L09_03995	PF00664	ABC transporter transmembrane region
A3L09_04005	PF01467	Cytidylyltransferase
A3L09_04010	PF01850	PIN domain
A3L09_04020	PF05168	HEPN domain
A3L09_04025	PF01022	Bacterial regulatory protein, arsR family
A3L09_04025	PF01909	Nucleotidyltransferase domain
A3L09_04030	PF01887	S-adenosyl-l-methionine hydroxide adenosyltransferase
A3L09_04035	PF01994	tRNA ribose 2'-O-methyltransferase, aTrm56
A3L09_04040	PF01066	CDP-alcohol phosphatidyltransferase
A3L09_04045	PF07998	Peptidase family M54
A3L09_04050	PF00270	DEAD/DEAH box helicase
A3L09_04050	PF00271	Helicase conserved C-terminal domain
A3L09_04050	PF02732	ERCC4 domain
A3L09_04050	PF12826	Helix-hairpin-helix motif
A3L09_04070	PF02616	ScpA/B protein
A3L09_04075	PF01909	Nucleotidyltransferase domain
A3L09_04080	PF05168	HEPN domain
A3L09_04085	PF02463	RecF/RecN/SMC N terminal domain
A3L09_04085	PF06470	SMC proteins Flexible Hinge Domain
A3L09_04095	PF01884	PcrB family
A3L09_04100	PF01850	PIN domain
A3L09_04105	PF01954	Protein of unknown function DUF104
A3L09_04110	PF01986	A3L09_04110
A3L09_04115	PF09868	A3L09_04115
A3L09_04120	PF01546	Peptidase family M20/M25/M40
A3L09_04120	PF07687	Peptidase dimerisation domain
A3L09_04125	PF13508	Acetyltransferase (GNAT) domain
A3L09_04130	PF08282	haloacid dehalogenase-like hydrolase
A3L09_04135	PF02626	Allophanate hydrolase subunit 2
A3L09_04140	PF02682	Allophanate hydrolase subunit 1
A3L09_04145	PF03746	LamB/YcsF family
A3L09_04150	PF17146	A3L09_04150
A3L09_04155	PF01520	N-acetylmuramoyl-L-alanine amidase
A3L09_04160	PF13238	AAA domain
A3L09_04175	PF00730	HhH-GPD superfamily base excision DNA repair protein
A3L09_04180	PF00733	Asparagine synthase
A3L09_04185	PF04014	Antidote-toxin recognition MazE
A3L09_04190	PF01850	PIN domain
A3L09_04195	PF01985	CRS1 / YhbY (CRM) domain
A3L09_04200	PF01090	Ribosomal protein S19e
A3L09_04205	PF01984	Double-stranded DNA-binding domain
A3L09_04215	PF00382	Transcription factor TFIIB repeat
A3L09_04215	PF08271	TFIIB zinc-binding
A3L09_04220	PF00752	XPG N-terminal domain
A3L09_04220	PF00867	XPG I-region
A3L09_04225	PF06146	A3L09_04225
A3L09_04230	PF13380	CoA binding domain
A3L09_04230	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L09_04240	PF12850	Calcineurin-like phosphoesterase superfamily domain
A3L09_04245	PF05239	PRC-barrel domain
A3L09_04250	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L09_04250	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L09_04255	PF00994	Probable molybdopterin binding domain
A3L09_04260	PF00696	Amino acid kinase family
A3L09_04265	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_04270	PF00288	GHMP kinases N terminal domain
A3L09_04270	PF08544	GHMP kinases C terminal
A3L09_04275	PF01934	Protein of unknown function DUF86
A3L09_04280	PF01909	Nucleotidyltransferase domain
A3L09_04285	PF01875	Memo-like protein
A3L09_04290	PF00291	Pyridoxal-phosphate dependent enzyme
A3L09_04295	PF01048	Phosphorylase superfamily
A3L09_04300	PF13181	Tetratricopeptide repeat
A3L09_04310	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_04310	PF02359	Cell division protein 48 (CDC48), N-terminal domain
A3L09_04310	PF02933	Cell division protein 48 (CDC48), domain 2
A3L09_04315	PF00227	Proteasome subunit
A3L09_04320	PF07521	RNA-metabolising metallo-beta-lactamase
A3L09_04320	PF10996	Beta-Casp domain
A3L09_04320	PF16661	A3L09_04320
A3L09_04320	PF17214	A3L09_04320
A3L09_04330	PF01068	ATP dependent DNA ligase domain
A3L09_04330	PF04675	DNA ligase N terminus
A3L09_04330	PF04679	ATP dependent DNA ligase C terminal region
A3L09_04340	PF00288	GHMP kinases N terminal domain
A3L09_04345	PF05670	A3L09_04345
A3L09_04345	PF05833	Fibronectin-binding protein A N-terminus (FbpA)
A3L09_04350	PF01546	Peptidase family M20/M25/M40
A3L09_04350	PF07687	Peptidase dimerisation domain
A3L09_04355	PF01637	Archaeal ATPase
A3L09_04360	PF00270	DEAD/DEAH box helicase
A3L09_04360	PF00271	Helicase conserved C-terminal domain
A3L09_04360	PF08494	A3L09_04360
A3L09_04365	PF07690	Major Facilitator Superfamily
A3L09_04370	PF00465	Iron-containing alcohol dehydrogenase
A3L09_04375	PF04013	Putative SAM-dependent RNA methyltransferase
A3L09_04380	PF01008	Initiation factor 2 subunit family
A3L09_04385	PF03266	NTPase
A3L09_04390	PF00571	CBS domain
A3L09_04395	PF12840	Helix-turn-helix domain
A3L09_04400	PF01918	Alba
A3L09_04405	PF00206	Lyase
A3L09_04405	PF10397	Adenylosuccinate lyase C-terminus
A3L09_04410	PF00224	Pyruvate kinase, barrel domain
A3L09_04410	PF02887	Pyruvate kinase, alpha/beta domain
A3L09_04415	PF01406	tRNA synthetases class I (C) catalytic domain
A3L09_04415	PF09190	DALR domain
A3L09_04420	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A3L09_04430	PF02517	CAAX protease self-immunity
A3L09_04435	PF06068	TIP49 C-terminus
A3L09_04440	PF01135	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
A3L09_04445	PF00482	Type II secretion system (T2SS), protein F
A3L09_04450	PF00437	Type II/IV secretion system protein
A3L09_04455	PF06745	KaiC
A3L09_04460	PF01917	A3L09_04460
A3L09_04470	PF04659	A3L09_04470
A3L09_04475	PF05377	A3L09_04475
A3L09_04480	PF01917	A3L09_04480
A3L09_04485	PF01917	A3L09_04485
A3L09_04490	PF01917	A3L09_04490
A3L09_04495	PF01917	A3L09_04495
A3L09_04500	PF07381	A3L09_04500
A3L09_04505	PF13649	Methyltransferase domain
A3L09_04510	PF00072	Response regulator receiver domain
A3L09_04515	PF01584	CheW-like domain
A3L09_04515	PF01627	Hpt domain
A3L09_04515	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A3L09_04515	PF07194	P2 response regulator binding domain
A3L09_04530	PF13360	PQQ-like domain
A3L09_04535	PF01602	Adaptin N terminal region
A3L09_04555	PF04199	Putative cyclase
A3L09_04560	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A3L09_04560	PF05221	S-adenosyl-L-homocysteine hydrolase
A3L09_04565	PF01980	Uncharacterised protein family UPF0066
A3L09_04570	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_04575	PF05343	M42 glutamyl aminopeptidase
A3L09_04580	PF03547	A3L09_04580
A3L09_04585	PF03176	MMPL family
A3L09_04590	PF03551	Transcriptional regulator PadR-like family
A3L09_04595	PF01022	Bacterial regulatory protein, arsR family
A3L09_04605	PF13349	A3L09_04605
A3L09_04610	PF07690	Major Facilitator Superfamily
A3L09_04615	PF01923	Cobalamin adenosyltransferase
A3L09_04620	PF03819	MazG nucleotide pyrophosphohydrolase domain
A3L09_04625	PF05016	Plasmid stabilisation system protein
A3L09_04635	PF01523	Putative modulator of DNA gyrase
A3L09_04640	PF01523	Putative modulator of DNA gyrase
A3L09_04645	PF05763	A3L09_04645
A3L09_04655	PF02568	Thiamine biosynthesis protein (ThiI)
A3L09_04655	PF02926	THUMP domain
A3L09_04660	PF06197	A3L09_04660
A3L09_04665	PF02568	Thiamine biosynthesis protein (ThiI)
A3L09_04670	PF03551	Transcriptional regulator PadR-like family
A3L09_04680	PF00338	Ribosomal protein S10p/S20e
A3L09_04685	PF00009	Elongation factor Tu GTP binding domain
A3L09_04685	PF03143	Elongation factor Tu C-terminal domain
A3L09_04685	PF03144	Elongation factor Tu domain 2
A3L09_04695	PF02915	Rubrerythrin
A3L09_04700	PF02543	Carbamoyltransferase
A3L09_04700	PF16861	A3L09_04700
A3L09_04705	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L09_04705	PF03129	Anticodon binding domain
A3L09_04705	PF09180	Prolyl-tRNA synthetase, C-terminal
A3L09_04710	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L09_04710	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_04720	PF01096	Transcription factor S-II (TFIIS)
A3L09_04720	PF02150	RNA polymerases M/15 Kd subunit
A3L09_04725	PF00705	Proliferating cell nuclear antigen, N-terminal domain
A3L09_04725	PF02747	Proliferating cell nuclear antigen, C-terminal domain
A3L09_04735	PF00082	Subtilase family
A3L09_04740	PF00391	PEP-utilising enzyme, mobile domain
A3L09_04740	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
A3L09_04740	PF02896	PEP-utilising enzyme, TIM barrel domain
A3L09_04745	PF01554	MatE
A3L09_04750	PF01554	MatE
A3L09_04755	PF00326	Prolyl oligopeptidase family
A3L09_04755	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
A3L09_04760	PF01381	Helix-turn-helix
A3L09_04765	PF13302	Acetyltransferase (GNAT) domain
A3L09_04770	PF07885	Ion channel
A3L09_04775	PF01513	ATP-NAD kinase
A3L09_04785	PF00266	Aminotransferase class-V
A3L09_04800	PF01402	Ribbon-helix-helix protein, copG family
A3L09_04800	PF08753	NikR C terminal nickel binding domain
A3L09_04810	PF03965	Penicillinase repressor
A3L09_04815	PF01435	Peptidase family M48
A3L09_04820	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
A3L09_04825	PF10066	A3L09_04825
A3L09_04830	PF00535	Glycosyl transferase family 2
A3L09_04830	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_04835	PF01037	AsnC family
A3L09_04835	PF13412	Winged helix-turn-helix DNA-binding
A3L09_04840	PF00579	tRNA synthetases class I (W and Y)
A3L09_04845	PF01965	DJ-1/PfpI family
A3L09_04855	PF01189	NOL1/NOP2/sun family
A3L09_04855	PF17125	A3L09_04855
A3L09_04860	PF06325	Ribosomal protein L11 methyltransferase (PrmA)
A3L09_04865	PF06745	KaiC
A3L09_04870	PF11537	Protein of unknown function (DUF3227)
A3L09_04885	PF01866	Putative diphthamide synthesis protein
A3L09_04890	PF05708	Orthopoxvirus protein of unknown function (DUF830)
A3L09_04895	PF01906	Putative heavy-metal-binding
A3L09_04900	PF10086	A3L09_04900
A3L09_04905	PF03551	Transcriptional regulator PadR-like family
A3L09_04910	PF07853	A3L09_04910
A3L09_04910	PF13630	A3L09_04910
A3L09_04920	PF13649	Methyltransferase domain
A3L09_04925	PF04024	A3L09_04925
A3L09_04935	PF01874	ATP:dephospho-CoA triphosphoribosyl transferase
A3L09_04940	PF08967	Domain of unknown function (DUF1884)
A3L09_04955	PF01914	A3L09_04955
A3L09_04960	PF02566	OsmC-like protein
A3L09_04965	PF04055	Radical SAM superfamily
A3L09_04970	PF07722	Peptidase C26
A3L09_04975	PF00155	Aminotransferase class I and II
A3L09_04985	PF02475	Met-10+ like-protein
A3L09_04995	PF12705	PD-(D/E)XK nuclease superfamily
A3L09_05000	PF13173	AAA domain
A3L09_05000	PF13635	A3L09_05000
A3L09_05005	PF00753	Metallo-beta-lactamase superfamily
A3L09_05020	PF03477	ATP cone domain
A3L09_05025	PF00149	Calcineurin-like phosphoesterase
A3L09_05030	PF00571	CBS domain
A3L09_05035	PF13230	Glutamine amidotransferases class-II
A3L09_05040	PF13588	Type I restriction enzyme R protein N terminus (HSDR_N)
A3L09_05045	PF14464	Prokaryotic homologs of the JAB domain
A3L09_05050	PF00586	AIR synthase related protein, N-terminal domain
A3L09_05050	PF02769	AIR synthase related protein, C-terminal domain
A3L09_05060	PF00881	Nitroreductase family
A3L09_05065	PF00005	ABC transporter
A3L09_05065	PF00037	4Fe-4S binding domain
A3L09_05065	PF04068	Possible Fer4-like domain in RNase L inhibitor, RLI
A3L09_05070	PF17164	A3L09_05070
A3L09_05080	PF00069	Protein kinase domain
A3L09_05095	PF01751	Toprim domain
A3L09_05100	PF00589	Phage integrase family
A3L09_05100	PF02899	Phage integrase, N-terminal SAM-like domain
A3L09_05105	PF01008	Initiation factor 2 subunit family
A3L09_05110	PF01092	Ribosomal protein S6e
A3L09_05115	PF12840	Helix-turn-helix domain
A3L09_05115	PF13424	Tetratricopeptide repeat
A3L09_05115	PF13432	Tetratricopeptide repeat
A3L09_05135	PF00753	Metallo-beta-lactamase superfamily
A3L09_05140	PF04457	A3L09_05140
A3L09_05145	PF02915	Rubrerythrin
A3L09_05145	PF05763	A3L09_05145
A3L09_05150	PF01026	TatD related DNase
A3L09_05155	PF11505	Protein of unknown function (DUF3216)
A3L09_05165	PF00701	Dihydrodipicolinate synthetase family
A3L09_05170	PF01637	Archaeal ATPase
A3L09_05170	PF03008	A3L09_05170
A3L09_05170	PF09339	IclR helix-turn-helix domain
A3L09_05180	PF01935	Domain of unknown function DUF87
A3L09_05180	PF05872	A3L09_05180
A3L09_05180	PF09378	HAS barrel domain
A3L09_05185	PF00149	Calcineurin-like phosphoesterase
A3L09_05190	PF04423	Rad50 zinc hook motif
A3L09_05190	PF13476	AAA domain
A3L09_05195	PF09376	NurA domain
A3L09_05200	PF01904	Protein of unknown function DUF72
A3L09_05205	PF01972	Serine dehydrogenase proteinase
A3L09_05215	PF01907	Ribosomal protein L37e
A3L09_05220	PF01423	LSM domain
A3L09_05235	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L09_05235	PF03129	Anticodon binding domain
A3L09_05240	PF01934	Protein of unknown function DUF86
A3L09_05245	PF01909	Nucleotidyltransferase domain
A3L09_05250	PF01925	A3L09_05250
A3L09_05260	PF01926	50S ribosome-binding GTPase
A3L09_05265	PF01037	AsnC family
A3L09_05265	PF12802	MarR family
A3L09_05270	PF16575	A3L09_05270
A3L09_05275	PF01040	UbiA prenyltransferase family
A3L09_05285	PF01336	OB-fold nucleic acid binding domain
A3L09_05295	PF01336	OB-fold nucleic acid binding domain
A3L09_05295	PF08646	Replication factor-A C terminal domain
A3L09_05300	PF00069	Protein kinase domain
A3L09_05305	PF03008	A3L09_05305
A3L09_05305	PF13173	AAA domain
A3L09_05310	PF04079	Putative transcriptional regulators (Ypuh-like)
A3L09_05315	PF00462	Glutaredoxin
A3L09_05320	PF01261	Xylose isomerase-like TIM barrel
A3L09_05325	PF00448	SRP54-type protein, GTPase domain
A3L09_05325	PF02881	SRP54-type protein, helical bundle domain
A3L09_05335	PF02608	Basic membrane protein
A3L09_05340	PF00005	ABC transporter
A3L09_05345	PF02653	A3L09_05345
A3L09_05350	PF02653	A3L09_05350
A3L09_05355	PF01297	Periplasmic solute binding protein family
A3L09_05360	PF16286	A3L09_05360
A3L09_05370	PF00156	Phosphoribosyl transferase domain
A3L09_05375	PF04193	PQ loop repeat
A3L09_05385	PF01343	Peptidase family S49
A3L09_05390	PF09638	Ph1570 protein
A3L09_05395	PF01594	A3L09_05395
A3L09_05400	PF00809	Pterin binding enzyme
A3L09_05405	PF00288	GHMP kinases N terminal domain
A3L09_05405	PF08544	GHMP kinases C terminal
A3L09_05410	PF09171	Domain of unknown function (DUF1886)
A3L09_05420	PF12679	A3L09_05420
A3L09_05425	PF00005	ABC transporter
A3L09_05430	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
A3L09_05435	PF00271	Helicase conserved C-terminal domain
A3L09_05435	PF04851	Type III restriction enzyme, res subunit
A3L09_05440	PF01416	tRNA pseudouridine synthase
A3L09_05450	PF00535	Glycosyl transferase family 2
A3L09_05450	PF04138	A3L09_05450
A3L09_05465	PF00117	Glutamine amidotransferase class-I
A3L09_05465	PF06418	CTP synthase N-terminus
A3L09_05475	PF04475	A3L09_05475
A3L09_05480	PF04010	Protein of unknown function (DUF357)
A3L09_05485	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_05490	PF04266	ASCH domain
A3L09_05495	PF06695	A3L09_05495
A3L09_05500	PF00384	Molybdopterin oxidoreductase
A3L09_05500	PF01568	Molydopterin dinucleotide binding domain
A3L09_05500	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L09_05505	PF00881	Nitroreductase family
A3L09_05510	PF01177	Asp/Glu/Hydantoin racemase
A3L09_05575	PF04587	ADP-specific Phosphofructokinase/Glucokinase conserved region
A3L09_05580	PF13173	AAA domain
A3L09_05580	PF13635	A3L09_05580
A3L09_05585	PF11536	Protein of unknown function (DUF3226)
A3L09_05590	PF09622	A3L09_05590
A3L09_05595	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_05595	PF00672	HAMP domain
A3L09_05595	PF02743	Cache domain
A3L09_05600	PF00575	S1 RNA binding domain
A3L09_05600	PF01336	OB-fold nucleic acid binding domain
A3L09_05610	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_05615	PF01850	PIN domain
A3L09_05625	PF00136	DNA polymerase family B
A3L09_05625	PF03104	DNA polymerase family B, exonuclease domain
A3L09_05635	PF01029	NusB family
A3L09_05635	PF01189	NOL1/NOP2/sun family
A3L09_05640	PF01850	PIN domain
A3L09_05645	PF01871	AMMECR1
A3L09_05650	PF01910	Domain of unknown function DUF77
A3L09_05655	PF04123	A3L09_05655
A3L09_05665	PF01261	Xylose isomerase-like TIM barrel
A3L09_05670	PF03576	Peptidase family S58
A3L09_05675	PF17179	A3L09_05675
A3L09_05680	PF00175	Oxidoreductase NAD-binding domain
A3L09_05680	PF00970	Oxidoreductase FAD-binding domain
A3L09_05680	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L09_05685	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L09_05690	PF00374	Nickel-dependent hydrogenase
A3L09_05710	PF01750	Hydrogenase maturation protease
A3L09_05715	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_05715	PF13510	2Fe-2S iron-sulfur cluster binding domain
A3L09_05715	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L09_05720	PF00037	4Fe-4S binding domain
A3L09_05720	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
A3L09_05720	PF10531	SLBB domain
A3L09_05720	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A3L09_05725	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin
A3L09_05730	PF17179	A3L09_05730
A3L09_05735	PF00175	Oxidoreductase NAD-binding domain
A3L09_05735	PF00970	Oxidoreductase FAD-binding domain
A3L09_05735	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L09_05740	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L09_05745	PF00374	Nickel-dependent hydrogenase
A3L09_05750	PF03551	Transcriptional regulator PadR-like family
A3L09_05755	PF07690	Major Facilitator Superfamily
A3L09_05760	PF00710	Asparaginase
A3L09_05765	PF01364	Peptidase family C25
A3L09_05765	PF05048	Periplasmic copper-binding protein (NosD)
A3L09_05765	PF07705	CARDB
A3L09_05775	PF00994	Probable molybdopterin binding domain
A3L09_05780	PF01850	PIN domain
A3L09_05785	PF00994	Probable molybdopterin binding domain
A3L09_05785	PF03453	MoeA N-terminal region (domain I and II)
A3L09_05785	PF03454	MoeA C-terminal region (domain IV)
A3L09_05795	PF00005	ABC transporter
A3L09_05795	PF03459	TOBE domain
A3L09_05800	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_05815	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_05820	PF01554	MatE
A3L09_05825	PF01287	Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
A3L09_05825	PF08207	Elongation factor P (EF-P) KOW-like domain
A3L09_05835	PF12850	Calcineurin-like phosphoesterase superfamily domain
A3L09_05840	PF01791	DeoC/LacD family aldolase
A3L09_05845	PF00375	Sodium:dicarboxylate symporter family
A3L09_05850	PF02237	Biotin protein ligase C terminal domain
A3L09_05850	PF03099	Biotin/lipoate A/B protein ligase family
A3L09_05860	PF01411	tRNA synthetases class II (A)
A3L09_05860	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L09_05865	PF03192	Pyrococcus protein of unknown function, DUF257
A3L09_05870	PF01170	Putative RNA methylase family UPF0020
A3L09_05870	PF02926	THUMP domain
A3L09_05875	PF04055	Radical SAM superfamily
A3L09_05875	PF13394	4Fe-4S single cluster domain
A3L09_05890	PF01131	DNA topoisomerase
A3L09_05890	PF01396	A3L09_05890
A3L09_05890	PF01751	Toprim domain
A3L09_05905	PF05834	A3L09_05905
A3L09_05910	PF00037	4Fe-4S binding domain
A3L09_05915	PF12840	Helix-turn-helix domain
A3L09_05920	PF13192	Thioredoxin domain
A3L09_05930	PF00753	Metallo-beta-lactamase superfamily
A3L09_05935	PF09827	CRISPR associated protein Cas2
A3L09_05940	PF12705	PD-(D/E)XK nuclease superfamily
A3L09_05945	PF01881	CRISPR associated protein Cas6
A3L09_05950	PF13936	Helix-turn-helix domain
A3L09_05955	PF01966	HD domain
A3L09_05960	PF00270	DEAD/DEAH box helicase
A3L09_05960	PF00271	Helicase conserved C-terminal domain
A3L09_05965	PF09658	A3L09_05965
A3L09_05975	PF01905	CRISPR-associated negative auto-regulator DevR/Csa2
A3L09_05980	PF09702	A3L09_05980
A3L09_05985	PF01867	CRISPR associated protein Cas1
A3L09_05990	PF01930	Domain of unknown function DUF83
A3L09_05995	PF00271	Helicase conserved C-terminal domain
A3L09_06000	PF09704	CRISPR-associated protein (Cas_Cas5)
A3L09_06005	PF01905	CRISPR-associated negative auto-regulator DevR/Csa2
A3L09_06015	PF01881	CRISPR associated protein Cas6
A3L09_06020	PF01364	Peptidase family C25
A3L09_06020	PF05048	Periplasmic copper-binding protein (NosD)
A3L09_06020	PF08308	A3L09_06020
A3L09_06025	PF12710	haloacid dehalogenase-like hydrolase
A3L09_06030	PF06745	KaiC
A3L09_06040	PF04389	Peptidase family M28
A3L09_06045	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_06050	PF01037	AsnC family
A3L09_06050	PF13404	AsnC-type helix-turn-helix domain
A3L09_06055	PF01926	50S ribosome-binding GTPase
A3L09_06055	PF02824	TGS domain
A3L09_06055	PF16897	A3L09_06055
A3L09_06060	PF03683	A3L09_06060
A3L09_06080	PF00474	Sodium:solute symporter family
A3L09_06085	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_06085	PF13510	2Fe-2S iron-sulfur cluster binding domain
A3L09_06090	PF01266	FAD dependent oxidoreductase
A3L09_06095	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_06095	PF13510	2Fe-2S iron-sulfur cluster binding domain
A3L09_06100	PF00037	4Fe-4S binding domain
A3L09_06105	PF04324	BFD-like [2Fe-2S] binding domain
A3L09_06110	PF01266	FAD dependent oxidoreductase
A3L09_06115	PF03577	A3L09_06115
A3L09_06120	PF07690	Major Facilitator Superfamily
A3L09_06125	PF13649	Methyltransferase domain
A3L09_06130	PF00795	Carbon-nitrogen hydrolase
A3L09_06140	PF00149	Calcineurin-like phosphoesterase
A3L09_06145	PF04283	A3L09_06145
A3L09_06155	PF03975	CheD chemotactic sensory transduction
A3L09_06160	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_06160	PF02743	Cache domain
A3L09_06165	PF04509	CheC-like family
A3L09_06165	PF13690	Chemotaxis phosphatase CheX
A3L09_06170	PF04509	CheC-like family
A3L09_06175	PF01584	CheW-like domain
A3L09_06175	PF01627	Hpt domain
A3L09_06175	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A3L09_06175	PF02895	Signal transducing histidine kinase, homodimeric domain
A3L09_06175	PF07194	P2 response regulator binding domain
A3L09_06180	PF00072	Response regulator receiver domain
A3L09_06180	PF01339	CheB methylesterase
A3L09_06185	PF00072	Response regulator receiver domain
A3L09_06190	PF01739	CheR methyltransferase, SAM binding domain
A3L09_06190	PF03705	CheR methyltransferase, all-alpha domain
A3L09_06195	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_06200	PF01584	CheW-like domain
A3L09_06210	PF02830	V4R domain
A3L09_06210	PF06745	KaiC
A3L09_06215	PF00557	Metallopeptidase family M24
A3L09_06215	PF01321	Creatinase/Prolidase N-terminal domain
A3L09_06220	PF01814	Hemerythrin HHE cation binding domain
A3L09_06220	PF04282	A3L09_06220
A3L09_06220	PF13596	PAS domain
A3L09_06225	PF01206	Sulfurtransferase TusA
A3L09_06225	PF08984	Domain of unknown function (DUF1858)
A3L09_06230	PF01022	Bacterial regulatory protein, arsR family
A3L09_06235	PF00999	Sodium/hydrogen exchanger family
A3L09_06240	PF00571	CBS domain
A3L09_06250	PF01883	Domain of unknown function DUF59
A3L09_06255	PF01883	Domain of unknown function DUF59
A3L09_06260	PF06197	A3L09_06260
A3L09_06265	PF03600	Citrate transporter
A3L09_06275	PF00009	Elongation factor Tu GTP binding domain
A3L09_06275	PF00679	Elongation factor G C-terminus
A3L09_06275	PF03144	Elongation factor Tu domain 2
A3L09_06275	PF03764	Elongation factor G, domain IV
A3L09_06275	PF14492	Elongation Factor G, domain II
A3L09_06280	PF13561	Enoyl-(Acyl carrier protein) reductase
A3L09_06285	PF00583	Acetyltransferase (GNAT) family
A3L09_06290	PF00578	AhpC/TSA family
A3L09_06295	PF02915	Rubrerythrin
A3L09_06300	PF01475	Ferric uptake regulator family
A3L09_06305	PF00210	Ferritin-like domain
A3L09_06310	PF02915	Rubrerythrin
A3L09_06315	PF02915	Rubrerythrin
A3L09_06320	PF00924	Mechanosensitive ion channel
A3L09_06325	PF02535	A3L09_06325
A3L09_06330	PF02915	Rubrerythrin
A3L09_06335	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_06340	PF00578	AhpC/TSA family
A3L09_06340	PF10417	C-terminal domain of 1-Cys peroxiredoxin
A3L09_06345	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
A3L09_06345	PF01872	RibD C-terminal domain
A3L09_06350	PF00677	Lumazine binding domain
A3L09_06355	PF00925	GTP cyclohydrolase II
A3L09_06355	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
A3L09_06360	PF00885	6,7-dimethyl-8-ribityllumazine synthase
A3L09_06370	PF00474	Sodium:solute symporter family
A3L09_06375	PF07826	IMP cyclohydrolase-like protein
A3L09_06380	PF06849	Protein of unknown function (DUF1246)
A3L09_06380	PF06973	Domain of unknown function (DUF1297)
A3L09_06385	PF01259	SAICAR synthetase
A3L09_06390	PF01964	ThiC family
A3L09_06395	PF01946	Thi4 family
A3L09_06400	PF08543	Phosphomethylpyrimidine kinase
A3L09_06400	PF10120	Putative aldolase
A3L09_06415	PF10050	A3L09_06415
A3L09_06420	PF13561	Enoyl-(Acyl carrier protein) reductase
A3L09_06425	PF01161	Phosphatidylethanolamine-binding protein
A3L09_06430	PF13649	Methyltransferase domain
A3L09_06435	PF07690	Major Facilitator Superfamily
A3L09_06440	PF00133	tRNA synthetases class I (I, L, M and V)
A3L09_06440	PF08264	Anticodon-binding domain of tRNA
A3L09_06445	PF04252	A3L09_06445
A3L09_06475	PF02475	Met-10+ like-protein
A3L09_06480	PF13173	AAA domain
A3L09_06480	PF13635	A3L09_06480
A3L09_06485	PF01523	Putative modulator of DNA gyrase
A3L09_06490	PF01523	Putative modulator of DNA gyrase
A3L09_06495	PF07883	Cupin domain
A3L09_06500	PF01177	Asp/Glu/Hydantoin racemase
A3L09_06505	PF01544	CorA-like Mg2+ transporter protein
A3L09_06515	PF08308	A3L09_06515
A3L09_06515	PF09985	Domain of unknown function (DUF2223)
A3L09_06520	PF01975	Survival protein SurE
A3L09_06525	PF01850	PIN domain
A3L09_06530	PF02381	MraZ protein
A3L09_06540	PF04055	Radical SAM superfamily
A3L09_06545	PF12838	4Fe-4S dicluster domain
A3L09_06550	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L09_06550	PF17147	A3L09_06550
A3L09_06555	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L09_06560	PF01909	Nucleotidyltransferase domain
A3L09_06565	PF05168	HEPN domain
A3L09_06570	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L09_06575	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L09_06575	PF17147	A3L09_06575
A3L09_06580	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L09_06585	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L09_06590	PF01920	Prefoldin subunit
A3L09_06595	PF02996	Prefoldin subunit
A3L09_06600	PF02643	Uncharacterized ACR, COG1430
A3L09_06605	PF01242	6-pyruvoyl tetrahydropterin synthase
A3L09_06610	PF01850	PIN domain
A3L09_06625	PF13531	Bacterial extracellular solute-binding protein
A3L09_06630	PF13023	HD domain
A3L09_06640	PF01926	50S ribosome-binding GTPase
A3L09_06645	PF05016	Plasmid stabilisation system protein
A3L09_06655	PF02649	Type I GTP cyclohydrolase folE2
A3L09_06660	PF13559	A3L09_06660
A3L09_06670	PF04409	A3L09_06670
A3L09_06675	PF04406	Type IIB DNA topoisomerase
A3L09_06680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A3L09_06680	PF09239	Topoisomerase VI B subunit, transducer
A3L09_06685	PF00013	KH domain
A3L09_06690	PF01163	RIO1 family
A3L09_06695	PF01176	Translation initiation factor 1A / IF-1
A3L09_06705	PF03435	Saccharopine dehydrogenase
A3L09_06705	PF16653	A3L09_06705
A3L09_06710	PF03587	EMG1/NEP1 methyltransferase
A3L09_06725	PF01588	Putative tRNA binding domain
A3L09_06730	PF00892	EamA-like transporter family
A3L09_06735	PF01112	Asparaginase
A3L09_06740	PF07690	Major Facilitator Superfamily
A3L09_06745	PF04055	Radical SAM superfamily
A3L09_06755	PF01163	RIO1 family
A3L09_06755	PF09202	Rio2, N-terminal
A3L09_06765	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_06765	PF16450	A3L09_06765
A3L09_06770	PF01881	CRISPR associated protein Cas6
A3L09_06775	PF14681	Uracil phosphoribosyltransferase
A3L09_06780	PF01694	Rhomboid family
A3L09_06785	PF00459	Inositol monophosphatase family
A3L09_06790	PF01889	A3L09_06790
A3L09_06795	PF13685	Iron-containing alcohol dehydrogenase
A3L09_06800	PF03684	A3L09_06800
A3L09_06805	PF01966	HD domain
A3L09_06810	PF00155	Aminotransferase class I and II
A3L09_06815	PF03061	Thioesterase superfamily
A3L09_06820	PF04055	Radical SAM superfamily
A3L09_06825	PF01936	NYN domain
A3L09_06835	PF05127	Helicase
A3L09_06835	PF08351	Domain of unknown function (DUF1726)
A3L09_06835	PF13718	GNAT acetyltransferase 2
A3L09_06845	PF00326	Prolyl oligopeptidase family
A3L09_06845	PF07676	WD40-like Beta Propeller Repeat
A3L09_06850	PF08308	A3L09_06850
A3L09_06855	PF01380	SIS domain
A3L09_06855	PF13522	Glutamine amidotransferase domain
A3L09_06860	PF02516	Oligosaccharyl transferase STT3 subunit
A3L09_06865	PF02195	ParB-like nuclease domain
A3L09_06870	PF00406	Adenylate kinase
A3L09_06870	PF05191	Adenylate kinase, active site lid
A3L09_06875	PF10015	Uncharacterized protein conserved in archaea (DUF2258)
A3L09_06880	PF02554	A3L09_06880
A3L09_06880	PF13722	A3L09_06880
A3L09_06895	PF02374	Anion-transporting ATPase
A3L09_06910	PF12146	Putative lysophospholipase
A3L09_06930	PF00709	Adenylosuccinate synthetase
A3L09_06940	PF01370	NAD dependent epimerase/dehydratase family
A3L09_06945	PF10102	A3L09_06945
A3L09_06950	PF00571	CBS domain
A3L09_06950	PF01381	Helix-turn-helix
A3L09_06955	PF02996	Prefoldin subunit
A3L09_06960	PF01988	A3L09_06960
A3L09_06985	PF06745	KaiC
A3L09_06990	PF01880	Desulfoferrodoxin
A3L09_06995	PF00301	Rubredoxin
A3L09_07000	PF02915	Rubrerythrin
A3L09_07015	PF01967	MoaC family
A3L09_07020	PF00686	Starch binding domain
A3L09_07020	PF00756	Putative esterase
A3L09_07025	PF01336	OB-fold nucleic acid binding domain
A3L09_07025	PF08489	Domain of unknown function (DUF1743)
A3L09_07030	PF01916	Deoxyhypusine synthase
A3L09_07040	PF00005	ABC transporter
A3L09_07050	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_07055	PF13561	Enoyl-(Acyl carrier protein) reductase
A3L09_07060	PF01435	Peptidase family M48
A3L09_07070	PF00118	TCP-1/cpn60 chaperonin family
A3L09_07075	PF01163	RIO1 family
A3L09_07090	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L09_07090	PF03129	Anticodon binding domain
A3L09_07090	PF08915	Archaea-specific editing domain of threonyl-tRNA synthetase
A3L09_07095	PF00924	Mechanosensitive ion channel
A3L09_07100	PF04254	A3L09_07100
A3L09_07105	PF10447	Exosome component EXOSC1/CSL4
A3L09_07105	PF14382	Exosome complex exonuclease RRP4 N-terminal region
A3L09_07110	PF09840	A3L09_07110
A3L09_07115	PF13656	RNA polymerase Rpb3/Rpb11 dimerisation domain
A3L09_07125	PF11469	Ribonuclease III
A3L09_07130	PF04266	ASCH domain
A3L09_07135	PF04266	ASCH domain
A3L09_07140	PF04021	A3L09_07140
A3L09_07145	PF06819	A3L09_07145
A3L09_07150	PF13549	ATP-grasp domain
A3L09_07160	PF00009	Elongation factor Tu GTP binding domain
A3L09_07160	PF03144	Elongation factor Tu domain 2
A3L09_07160	PF09173	Initiation factor eIF2 gamma, C terminal
A3L09_07165	PF04900	Fcf1
A3L09_07170	PF01966	HD domain
A3L09_07195	PF00633	Helix-hairpin-helix motif
A3L09_07195	PF00730	HhH-GPD superfamily base excision DNA repair protein
A3L09_07195	PF10576	Iron-sulfur binding domain of endonuclease III
A3L09_07205	PF00069	Protein kinase domain
A3L09_07215	PF05763	A3L09_07215
A3L09_07220	PF01667	Ribosomal protein S27
A3L09_07225	PF00935	Ribosomal protein L44
A3L09_07235	PF01368	DHH family
A3L09_07235	PF02272	DHHA1 domain
A3L09_07240	PF05168	HEPN domain
A3L09_07245	PF01909	Nucleotidyltransferase domain
A3L09_07250	PF11419	Protein of unknown function (DUF3194)
A3L09_07255	PF01920	Prefoldin subunit
A3L09_07260	PF09341	Transcription factor Pcc1
A3L09_07270	PF02548	Ketopantoate hydroxymethyltransferase
A3L09_07275	PF01402	Ribbon-helix-helix protein, copG family
A3L09_07280	PF01850	PIN domain
A3L09_07285	PF01951	Archease protein family (MTH1598/TM1083)
A3L09_07290	PF01189	NOL1/NOP2/sun family
A3L09_07290	PF17125	A3L09_07290
A3L09_07295	PF13636	pre-rRNA processing and ribosome biogenesis
A3L09_07300	PF01139	tRNA-splicing ligase RtcB
A3L09_07305	PF01588	Putative tRNA binding domain
A3L09_07305	PF08264	Anticodon-binding domain of tRNA
A3L09_07305	PF09334	tRNA synthetases class I (M)
A3L09_07310	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A3L09_07310	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A3L09_07315	PF00128	Alpha amylase, catalytic domain
A3L09_07315	PF16561	A3L09_07315
A3L09_07320	PF01966	HD domain
A3L09_07325	PF04471	Restriction endonuclease
A3L09_07330	PF00162	Phosphoglycerate kinase
A3L09_07335	PF02146	Sir2 family
A3L09_07340	PF03222	Tryptophan/tyrosine permease family
A3L09_07345	PF00464	Serine hydroxymethyltransferase
A3L09_07360	PF04167	Protein of unknown function (DUF402)
A3L09_07365	PF02594	Uncharacterised ACR, YggU family COG1872
A3L09_07370	PF01113	Dihydrodipicolinate reductase, N-terminus
A3L09_07370	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
A3L09_07375	PF01008	Initiation factor 2 subunit family
A3L09_07380	PF01177	Asp/Glu/Hydantoin racemase
A3L09_07385	PF02441	Flavoprotein
A3L09_07385	PF04127	DNA / pantothenate metabolism flavoprotein
A3L09_07395	PF02641	Uncharacterized ACR, COG1993
A3L09_07400	PF02537	A3L09_07400
A3L09_07425	PF00491	Arginase family
A3L09_07430	PF06677	A3L09_07430
A3L09_07435	PF09339	IclR helix-turn-helix domain
A3L09_07440	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_07440	PF11495	Archaeal transcriptional regulator TrmB
A3L09_07445	PF00270	DEAD/DEAH box helicase
A3L09_07445	PF01131	DNA topoisomerase
A3L09_07445	PF01751	Toprim domain
A3L09_07445	PF14528	LAGLIDADG-like domain
A3L09_07445	PF14890	Intein splicing domain
A3L09_07450	PF04434	A3L09_07450
A3L09_07455	PF01775	Ribosomal L18ae/LX protein domain
A3L09_07460	PF01912	eIF-6 family
A3L09_07465	PF01198	Ribosomal protein L31e
A3L09_07470	PF00832	Ribosomal L39 protein
A3L09_07475	PF01642	Methylmalonyl-CoA mutase
A3L09_07485	PF00011	Hsp20/alpha crystallin family
A3L09_07490	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_07490	PF02359	Cell division protein 48 (CDC48), N-terminal domain
A3L09_07490	PF02933	Cell division protein 48 (CDC48), domain 2
A3L09_07500	PF03205	Molybdopterin guanine dinucleotide synthesis protein B
A3L09_07500	PF04060	Putative Fe-S cluster
A3L09_07515	PF00270	DEAD/DEAH box helicase
A3L09_07515	PF00271	Helicase conserved C-terminal domain
A3L09_07515	PF09369	A3L09_07515
A3L09_07525	PF01205	Uncharacterized protein family UPF0029
A3L09_07525	PF09186	Domain of unknown function (DUF1949)
A3L09_07545	PF09999	A3L09_07545
A3L09_07550	PF00857	Isochorismatase family
A3L09_07555	PF01594	A3L09_07555
A3L09_07565	PF13680	Protein of unknown function (DUF4152)
A3L09_07580	PF00037	4Fe-4S binding domain
A3L09_07580	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L09_07580	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L09_07600	PF09946	A3L09_07600
A3L09_07605	PF01381	Helix-turn-helix
A3L09_07610	PF00005	ABC transporter
A3L09_07615	PF12698	ABC-2 family transporter protein
A3L09_07620	PF14527	WhiA LAGLIDADG-like domain
A3L09_07620	PF14528	LAGLIDADG-like domain
A3L09_07630	PF04412	A3L09_07630
A3L09_07635	PF01989	Protein of unknown function DUF126
A3L09_07640	PF02163	Peptidase family M50
A3L09_07650	PF13231	A3L09_07650
A3L09_07665	PF07441	A3L09_07665
A3L09_07670	PF03463	eRF1 domain 1
A3L09_07670	PF03464	eRF1 domain 2
A3L09_07670	PF03465	eRF1 domain 3
A3L09_07675	PF05016	Plasmid stabilisation system protein
A3L09_07685	PF00701	Dihydrodipicolinate synthetase family
A3L09_07690	PF01637	Archaeal ATPase
A3L09_07695	PF00750	tRNA synthetases class I (R)
A3L09_07695	PF03485	Arginyl tRNA synthetase N terminal domain
A3L09_07695	PF05746	DALR anticodon binding domain
A3L09_07700	PF10437	Bacterial lipoate protein ligase C-terminus
A3L09_07705	PF01944	A3L09_07705
A3L09_07710	PF04055	Radical SAM superfamily
A3L09_07715	PF01842	ACT domain
A3L09_07720	PF01899	A3L09_07720
A3L09_07725	PF04066	A3L09_07725
A3L09_07730	PF03334	A3L09_07730
A3L09_07735	PF13244	A3L09_07735
A3L09_07740	PF04039	A3L09_07740
A3L09_07745	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L09_07750	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_07755	PF00361	NADH-Ubiquinone/plastoquinone (complex I), various chains
A3L09_07760	PF00146	NADH dehydrogenase
A3L09_07765	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L09_07770	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L09_07775	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L09_07780	PF12838	4Fe-4S dicluster domain
A3L09_07785	PF00860	Permease family
A3L09_07790	PF00202	Aminotransferase class-III
A3L09_07795	PF01037	AsnC family
A3L09_07795	PF13404	AsnC-type helix-turn-helix domain
A3L09_07805	PF01870	Archaeal holliday junction resolvase (hjc)
A3L09_07810	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L09_07815	PF01255	Putative undecaprenyl diphosphate synthase
A3L09_07825	PF01472	PUA domain
A3L09_07825	PF01702	Queuine tRNA-ribosyltransferase
A3L09_07825	PF14809	C1 domain of tRNA-guanine transglycosylase dimerisation
A3L09_07825	PF14810	Patch-forming domain C2 of tRNA-guanine transglycosylase
A3L09_07830	PF01384	A3L09_07830
A3L09_07845	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
A3L09_07850	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_07855	PF01938	TRAM domain
A3L09_07860	PF00107	Zinc-binding dehydrogenase
A3L09_07860	PF08240	Alcohol dehydrogenase GroES-like domain
A3L09_07865	PF03683	A3L09_07865
A3L09_07870	PF11848	A3L09_07870
A3L09_07880	PF01409	tRNA synthetases class II core domain (F)
A3L09_07885	PF10049	A3L09_07885
A3L09_07895	PF10130	A3L09_07895
A3L09_07900	PF03483	B3/4 domain
A3L09_07900	PF03484	tRNA synthetase B5 domain
A3L09_07905	PF02511	Thymidylate synthase complementing protein
A3L09_07910	PF06195	A3L09_07910
A3L09_07915	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A3L09_07915	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A3L09_07925	PF01189	NOL1/NOP2/sun family
A3L09_07925	PF17125	A3L09_07925
A3L09_07935	PF00149	Calcineurin-like phosphoesterase
A3L09_07940	PF01247	Ribosomal protein L35Ae
A3L09_07945	PF02005	N2,N2-dimethylguanosine tRNA methyltransferase
A3L09_07960	PF08308	A3L09_07960
A3L09_07960	PF09985	Domain of unknown function (DUF2223)
A3L09_07965	PF01926	50S ribosome-binding GTPase
A3L09_07965	PF02824	TGS domain
A3L09_07965	PF08438	GTPase of unknown function C-terminal
A3L09_07970	PF01928	CYTH domain
A3L09_07975	PF13412	Winged helix-turn-helix DNA-binding
A3L09_07980	PF02441	Flavoprotein
A3L09_07985	PF02457	DisA bacterial checkpoint controller nucleotide-binding
A3L09_07990	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L09_07990	PF00483	Nucleotidyl transferase
A3L09_07995	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_08000	PF02421	Ferrous iron transport protein B
A3L09_08000	PF07664	A3L09_08000
A3L09_08000	PF07670	Nucleoside recognition
A3L09_08005	PF04023	FeoA domain
A3L09_08010	PF09685	A3L09_08010
A3L09_08015	PF06508	Queuosine biosynthesis protein QueC
A3L09_08020	PF00586	AIR synthase related protein, N-terminal domain
A3L09_08020	PF02769	AIR synthase related protein, C-terminal domain
A3L09_08030	PF03463	eRF1 domain 1
A3L09_08030	PF03464	eRF1 domain 2
A3L09_08030	PF03465	eRF1 domain 3
A3L09_08045	PF00557	Metallopeptidase family M24
A3L09_08045	PF01321	Creatinase/Prolidase N-terminal domain
A3L09_08055	PF13847	Methyltransferase domain
A3L09_08065	PF01351	Ribonuclease HII
A3L09_08070	PF00950	A3L09_08070
A3L09_08075	PF00005	ABC transporter
A3L09_08080	PF10602	26S proteasome subunit RPN7
A3L09_08085	PF00801	PKD domain
A3L09_08090	PF00753	Metallo-beta-lactamase superfamily
A3L09_08090	PF12706	Beta-lactamase superfamily domain
A3L09_08095	PF01963	A3L09_08095
A3L09_08100	PF07650	KH domain
A3L09_08105	PF02163	Peptidase family M50
A3L09_08110	PF06560	Glucose-6-phosphate isomerase (GPI)
A3L09_08115	PF03956	A3L09_08115
A3L09_08125	PF00155	Aminotransferase class I and II
A3L09_08140	PF01230	HIT domain
A3L09_08145	PF00535	Glycosyl transferase family 2
A3L09_08160	PF02637	GatB domain
A3L09_08160	PF02934	GatB/GatE catalytic domain
A3L09_08160	PF02938	GAD domain
A3L09_08165	PF00710	Asparaginase
A3L09_08170	PF01997	Translin family
A3L09_08175	PF04493	Endonuclease V
A3L09_08180	PF01982	Domain of unknown function DUF120
A3L09_08180	PF12802	MarR family
A3L09_08190	PF05239	PRC-barrel domain
A3L09_08200	PF02926	THUMP domain
A3L09_08205	PF01157	Ribosomal protein L21e
A3L09_08210	PF03874	RNA polymerase Rpb4
A3L09_08215	PF04919	Protein of unknown function (DUF655)
A3L09_08220	PF00398	Ribosomal RNA adenine dimethylase
A3L09_08225	PF01597	Glycine cleavage H-protein
A3L09_08235	PF00534	Glycosyl transferases group 1
A3L09_08235	PF13439	Glycosyltransferase Family 4
A3L09_08240	PF03706	A3L09_08240
A3L09_08245	PF01040	UbiA prenyltransferase family
A3L09_08250	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_08255	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L09_08255	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L09_08260	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L09_08270	PF08704	tRNA methyltransferase complex GCD14 subunit
A3L09_08270	PF14801	tRNA methyltransferase complex GCD14 subunit N-term
A3L09_08280	PF01922	SRP19 protein
A3L09_08285	PF01037	AsnC family
A3L09_08290	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L09_08295	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_08300	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_08305	PF00005	ABC transporter
A3L09_08305	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_08310	PF00005	ABC transporter
A3L09_08310	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_08320	PF00270	DEAD/DEAH box helicase
A3L09_08320	PF00271	Helicase conserved C-terminal domain
A3L09_08320	PF14520	Helix-hairpin-helix domain
A3L09_08330	PF13207	AAA domain
A3L09_08335	PF01877	RNA binding
A3L09_08340	PF00312	Ribosomal protein S15
A3L09_08340	PF08069	Ribosomal S13/S15 N-terminal domain
A3L09_08345	PF02272	DHHA1 domain
A3L09_08355	PF01015	Ribosomal S3Ae family
A3L09_08360	PF05343	M42 glutamyl aminopeptidase
A3L09_08365	PF01934	Protein of unknown function DUF86
A3L09_08370	PF07998	Peptidase family M54
A3L09_08375	PF01928	CYTH domain
A3L09_08385	PF02386	Cation transport protein
A3L09_08390	PF00557	Metallopeptidase family M24
A3L09_08400	PF00571	CBS domain
A3L09_08405	PF01699	Sodium/calcium exchanger protein
A3L09_08410	PF01676	Metalloenzyme superfamily
A3L09_08410	PF10143	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
A3L09_08415	PF00248	Aldo/keto reductase family
A3L09_08420	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L09_08420	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L09_08425	PF01895	PhoU domain
A3L09_08425	PF02080	TrkA-C domain
A3L09_08430	PF01895	PhoU domain
A3L09_08430	PF02080	TrkA-C domain
A3L09_08435	PF01769	Divalent cation transporter
A3L09_08440	PF01261	Xylose isomerase-like TIM barrel
A3L09_08445	PF13380	CoA binding domain
A3L09_08445	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L09_08450	PF13549	ATP-grasp domain
A3L09_08455	PF12773	A3L09_08455
A3L09_08455	PF13421	A3L09_08455
A3L09_08475	PF00731	AIR carboxylase
A3L09_08490	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
A3L09_08490	PF02843	Phosphoribosylglycinamide synthetase, C domain
A3L09_08490	PF02844	Phosphoribosylglycinamide synthetase, N domain
A3L09_08495	PF06849	Protein of unknown function (DUF1246)
A3L09_08495	PF06973	Domain of unknown function (DUF1297)
A3L09_08500	PF07690	Major Facilitator Superfamily
A3L09_08505	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
A3L09_08510	PF13507	CobB/CobQ-like glutamine amidotransferase domain
A3L09_08515	PF00391	PEP-utilising enzyme, mobile domain
A3L09_08515	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
A3L09_08520	PF00586	AIR synthase related protein, N-terminal domain
A3L09_08520	PF02769	AIR synthase related protein, C-terminal domain
A3L09_08525	PF06849	Protein of unknown function (DUF1246)
A3L09_08525	PF06973	Domain of unknown function (DUF1297)
A3L09_08530	PF05763	A3L09_08530
A3L09_08535	PF00478	IMP dehydrogenase / GMP reductase domain
A3L09_08535	PF00571	CBS domain
A3L09_08540	PF00958	GMP synthase C terminal domain
A3L09_08540	PF02540	NAD synthase
A3L09_08545	PF01954	Protein of unknown function DUF104
A3L09_08550	PF01850	PIN domain
A3L09_08555	PF00117	Glutamine amidotransferase class-I
A3L09_08565	PF09874	A3L09_08565
A3L09_08570	PF10102	A3L09_08570
A3L09_08595	PF04021	A3L09_08595
A3L09_08605	PF00091	Tubulin/FtsZ family, GTPase domain
A3L09_08610	PF00432	Prenyltransferase and squalene oxidase repeat
A3L09_08615	PF04055	Radical SAM superfamily
A3L09_08615	PF08608	Wyosine base formation
A3L09_08620	PF03673	A3L09_08620
A3L09_08625	PF05161	MOFRL family
A3L09_08625	PF13660	Domain of unknown function (DUF4147)
A3L09_08635	PF01863	Protein of unknown function DUF45
A3L09_08640	PF01957	NfeD-like C-terminal, partner-binding
A3L09_08650	PF13380	CoA binding domain
A3L09_08655	PF10130	A3L09_08655
A3L09_08665	PF01170	Putative RNA methylase family UPF0020
A3L09_08680	PF01894	Uncharacterised protein family UPF0047
A3L09_08690	PF06733	DEAD_2
A3L09_08690	PF06777	A3L09_08690
A3L09_08690	PF13307	Helicase C-terminal domain
A3L09_08700	PF05343	M42 glutamyl aminopeptidase
A3L09_08710	PF03749	Sugar fermentation stimulation protein
A3L09_08715	PF03604	DNA directed RNA polymerase, 7 kDa subunit
A3L09_08720	PF01780	Ribosomal L37ae protein family
A3L09_08725	PF02597	ThiS family
A3L09_08735	PF00575	S1 RNA binding domain
A3L09_08735	PF07541	Eukaryotic translation initiation factor 2 alpha subunit
A3L09_08740	PF04135	Nucleolar RNA-binding protein, Nop10p family
A3L09_08745	PF09754	PAC2 family
A3L09_08750	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L09_08750	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L09_08750	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L09_08750	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L09_08755	PF00483	Nucleotidyl transferase
A3L09_08755	PF01050	Mannose-6-phosphate isomerase
A3L09_08760	PF04587	ADP-specific Phosphofructokinase/Glucokinase conserved region
A3L09_08765	PF04981	A3L09_08765
A3L09_08770	PF04242	Protein of unknown function (DUF424)
A3L09_08775	PF01022	Bacterial regulatory protein, arsR family
A3L09_08780	PF00833	Ribosomal S17
A3L09_08785	PF01979	Amidohydrolase family
A3L09_08790	PF00152	tRNA synthetases class II (D, K and N)
A3L09_08790	PF01336	OB-fold nucleic acid binding domain
A3L09_08810	PF06195	A3L09_08810
A3L09_08815	PF01889	A3L09_08815
A3L09_08825	PF13416	Bacterial extracellular solute-binding protein
A3L09_08830	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_08835	PF00005	ABC transporter
A3L09_08835	PF08402	TOBE domain
A3L09_08840	PF04289	Protein of unknown function (DUF447)
A3L09_08845	PF00149	Calcineurin-like phosphoesterase
A3L09_08850	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A3L09_08850	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
A3L09_08855	PF00270	DEAD/DEAH box helicase
A3L09_08855	PF00271	Helicase conserved C-terminal domain
A3L09_08860	PF01201	Ribosomal protein S8e
A3L09_08865	PF04326	Divergent AAA domain
A3L09_08865	PF12840	Helix-turn-helix domain
A3L09_08865	PF13749	ATP-dependent DNA helicase recG C-terminal
A3L09_08870	PF06858	Nucleolar GTP-binding protein 1 (NOG1)
A3L09_08885	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L09_08885	PF00483	Nucleotidyl transferase
A3L09_08890	PF05763	A3L09_08890
A3L09_08895	PF15517	TBP-interacting protein N-terminus
A3L09_08900	PF03911	Sec61beta family
A3L09_08905	PF02222	ATP-grasp domain
A3L09_08910	PF00586	AIR synthase related protein, N-terminal domain
A3L09_08910	PF02769	AIR synthase related protein, C-terminal domain
A3L09_08915	PF01259	SAICAR synthetase
A3L09_08920	PF00156	Phosphoribosyl transferase domain
A3L09_08920	PF13537	Glutamine amidotransferase domain
A3L09_08925	PF02452	PemK-like protein
A3L09_08930	PF01954	Protein of unknown function DUF104
A3L09_08935	PF00384	Molybdopterin oxidoreductase
A3L09_08935	PF01568	Molydopterin dinucleotide binding domain
A3L09_08935	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L09_08940	PF01174	SNO glutamine amidotransferase family
A3L09_08945	PF01680	SOR/SNZ family
A3L09_08945	PF05690	Thiazole biosynthesis protein ThiG
A3L09_08955	PF01931	Protein of unknown function DUF84
A3L09_08960	PF00133	tRNA synthetases class I (I, L, M and V)
A3L09_08960	PF08264	Anticodon-binding domain of tRNA
A3L09_08965	PF05763	A3L09_08965
A3L09_08970	PF02449	Beta-galactosidase
A3L09_08975	PF01380	SIS domain
A3L09_08980	PF00005	ABC transporter
A3L09_08980	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_08985	PF00005	ABC transporter
A3L09_08985	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_08990	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_08995	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_09000	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L09_09005	PF00232	Glycosyl hydrolase family 1
A3L09_09020	PF02585	GlcNAc-PI de-N-acetylase
A3L09_09025	PF04055	Radical SAM superfamily
A3L09_09025	PF13394	4Fe-4S single cluster domain
A3L09_09030	PF01900	Rpp14/Pop5 family
A3L09_09035	PF00534	Glycosyl transferases group 1
A3L09_09035	PF08323	Starch synthase catalytic domain
A3L09_09040	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_09040	PF11495	Archaeal transcriptional regulator TrmB
A3L09_09045	PF00534	Glycosyl transferases group 1
A3L09_09050	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_09055	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_09060	PF01547	Bacterial extracellular solute-binding protein
A3L09_09070	PF01978	Sugar-specific transcriptional regulator TrmB
A3L09_09070	PF11495	Archaeal transcriptional regulator TrmB
A3L09_09080	PF13416	Bacterial extracellular solute-binding protein
A3L09_09085	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_09090	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_09095	PF03065	Glycosyl hydrolase family 57
A3L09_09095	PF09985	Domain of unknown function (DUF2223)
A3L09_09100	PF00005	ABC transporter
A3L09_09100	PF08402	TOBE domain
A3L09_09105	PF03686	Uncharacterised protein family (UPF0146)
A3L09_09110	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L09_09110	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L09_09110	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L09_09110	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L09_09115	PF12706	Beta-lactamase superfamily domain
A3L09_09120	PF01546	Peptidase family M20/M25/M40
A3L09_09120	PF07687	Peptidase dimerisation domain
A3L09_09125	PF00079	Serpin (serine protease inhibitor)
A3L09_09130	PF00079	Serpin (serine protease inhibitor)
A3L09_09135	PF13847	Methyltransferase domain
A3L09_09155	PF00005	ABC transporter
A3L09_09160	PF01472	PUA domain
A3L09_09160	PF10672	S-adenosylmethionine-dependent methyltransferase
A3L09_09170	PF01970	A3L09_09170
A3L09_09180	PF06745	KaiC
A3L09_09185	PF06745	KaiC
A3L09_09190	PF13086	AAA domain
A3L09_09190	PF13087	AAA domain
A3L09_09200	PF00890	FAD binding domain
A3L09_09200	PF02910	Fumarate reductase flavoprotein C-term
A3L09_09205	PF01954	Protein of unknown function DUF104
A3L09_09215	PF02445	Quinolinate synthetase A protein
A3L09_09220	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L09_09220	PF00483	Nucleotidyl transferase
A3L09_09225	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
A3L09_09225	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
A3L09_09235	PF02633	Creatinine amidohydrolase
A3L09_09240	PF03706	A3L09_09240
A3L09_09245	PF01564	Spermine/spermidine synthase
A3L09_09245	PF17284	A3L09_09245
A3L09_09255	PF01862	Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
A3L09_09260	PF00999	Sodium/hydrogen exchanger family
A3L09_09270	PF01368	DHH family
A3L09_09270	PF02254	TrkA-N domain
A3L09_09270	PF02272	DHHA1 domain
A3L09_09275	PF01941	S-adenosylmethionine synthetase (AdoMet synthetase)
A3L09_09280	PF00270	DEAD/DEAH box helicase
A3L09_09280	PF00271	Helicase conserved C-terminal domain
A3L09_09280	PF08494	A3L09_09280
A3L09_09280	PF14528	LAGLIDADG-like domain
A3L09_09280	PF14890	Intein splicing domain
A3L09_09285	PF00149	Calcineurin-like phosphoesterase
A3L09_09320	PF13412	Winged helix-turn-helix DNA-binding
A3L09_09330	PF02001	A3L09_09330
A3L09_09335	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_09335	PF14697	4Fe-4S dicluster domain
A3L09_09340	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_09340	PF14697	4Fe-4S dicluster domain
A3L09_09345	PF04055	Radical SAM superfamily
A3L09_09350	PF08241	Methyltransferase domain
A3L09_09355	PF04016	Domain of unknown function (DUF364)
A3L09_09355	PF13938	Domain of unknown function (DUF4213)
A3L09_09360	PF00753	Metallo-beta-lactamase superfamily
A3L09_09365	PF04191	Phospholipid methyltransferase
A3L09_09370	PF10007	A3L09_09370
A3L09_09375	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family
A3L09_09380	PF02579	Dinitrogenase iron-molybdenum cofactor
A3L09_09385	PF02579	Dinitrogenase iron-molybdenum cofactor
A3L09_09395	PF01061	A3L09_09395
A3L09_09400	PF00005	ABC transporter
A3L09_09405	PF13360	PQQ-like domain
A3L09_09410	PF08241	Methyltransferase domain
A3L09_09415	PF01458	Uncharacterized protein family (UPF0051)
A3L09_09420	PF00005	ABC transporter
A3L09_09425	PF02579	Dinitrogenase iron-molybdenum cofactor
A3L09_09430	PF00753	Metallo-beta-lactamase superfamily
A3L09_09440	PF01925	A3L09_09440
A3L09_09445	PF01925	A3L09_09445
A3L09_09455	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L09_09455	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L09_09460	PF13419	Haloacid dehalogenase-like hydrolase
A3L09_09470	PF00155	Aminotransferase class I and II
A3L09_09475	PF03186	A3L09_09475
A3L09_09480	PF03167	Uracil DNA glycosylase superfamily
A3L09_09485	PF01902	ATP-binding region
A3L09_09495	PF10130	A3L09_09495
A3L09_09500	PF04608	Phosphatidylglycerophosphatase A
A3L09_09510	PF02654	A3L09_09510
A3L09_09515	PF03537	Glycoside-hydrolase family GH114
A3L09_09520	PF12804	MobA-like NTP transferase domain
A3L09_09525	PF05048	Periplasmic copper-binding protein (NosD)
A3L09_09525	PF08308	A3L09_09525
A3L09_09525	PF13229	Right handed beta helix region
A3L09_09530	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L09_09530	PF07685	CobB/CobQ-like glutamine amidotransferase domain
A3L09_09535	PF02277	Phosphoribosyltransferase
A3L09_09540	PF01955	A3L09_09540
A3L09_09550	PF01472	PUA domain
A3L09_09550	PF01507	Phosphoadenosine phosphosulfate reductase family
A3L09_09550	PF12838	4Fe-4S dicluster domain
A3L09_09580	PF00069	Protein kinase domain
A3L09_09585	PF00805	Pentapeptide repeats (8 copies)
A3L09_09585	PF07885	Ion channel
A3L09_09590	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_09590	PF09336	Vps4 C terminal oligomerisation domain
A3L09_09595	PF08308	A3L09_09595
A3L09_09595	PF10102	A3L09_09595
A3L09_09600	PF00069	Protein kinase domain
A3L09_09605	PF08308	A3L09_09605
A3L09_09605	PF13672	Protein phosphatase 2C
A3L09_09610	PF00069	Protein kinase domain
A3L09_09620	PF00004	ATPase family associated with various cellular activities (AAA)
A3L09_09620	PF09336	Vps4 C terminal oligomerisation domain
A3L09_09630	PF00069	Protein kinase domain
A3L09_09635	PF01145	SPFH domain / Band 7 family
A3L09_09640	PF01957	NfeD-like C-terminal, partner-binding
A3L09_09645	PF00265	Thymidine kinase
A3L09_09650	PF04027	Domain of unknown function (DUF371)
A3L09_09655	PF05763	A3L09_09655
A3L09_09660	PF00364	Biotin-requiring enzyme
A3L09_09660	PF00682	HMGL-like
A3L09_09660	PF02436	Conserved carboxylase domain
A3L09_09665	PF05175	Methyltransferase small domain
A3L09_09670	PF01599	Ribosomal protein S27a
A3L09_09675	PF01282	Ribosomal protein S24e
A3L09_09680	PF04019	A3L09_09680
A3L09_09685	PF06093	Spt4/RpoE2 zinc finger
A3L09_09690	PF00575	S1 RNA binding domain
A3L09_09690	PF03876	SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
A3L09_09695	PF00719	Inorganic pyrophosphatase
A3L09_09710	PF00717	Peptidase S24-like
A3L09_09715	PF06510	A3L09_09715
A3L09_09720	PF06510	A3L09_09720
A3L09_09745	PF00692	dUTPase
A3L09_09750	PF00428	60s Acidic ribosomal protein
A3L09_09755	PF00466	Ribosomal protein L10
A3L09_09760	PF00687	Ribosomal protein L1p/L10e family
A3L09_09765	PF00298	Ribosomal protein L11, RNA binding domain
A3L09_09765	PF03946	Ribosomal protein L11, N-terminal domain
A3L09_09770	PF00467	KOW motif
A3L09_09770	PF03439	Early transcription elongation factor of RNA pol II, NGN section
A3L09_09780	PF00091	Tubulin/FtsZ family, GTPase domain
A3L09_09780	PF12327	FtsZ family, C-terminal domain
A3L09_09785	PF04414	D-aminoacyl-tRNA deacylase
A3L09_09790	PF01895	PhoU domain
A3L09_09790	PF04014	Antidote-toxin recognition MazE
A3L09_09795	PF01497	Periplasmic binding protein
A3L09_09805	PF08308	A3L09_09805
A3L09_09810	PF08308	A3L09_09810
A3L09_09825	PF08745	UPF0278 family
A3L09_09830	PF04021	A3L09_09830
A3L09_09835	PF00808	Histone-like transcription factor (CBF/NF-Y) and archaeal histone
A3L09_09840	PF12850	Calcineurin-like phosphoesterase superfamily domain
A3L09_09845	PF00382	Transcription factor TFIIB repeat
A3L09_09845	PF08271	TFIIB zinc-binding
A3L09_09850	PF04410	Gar1/Naf1 RNA binding region
A3L09_09855	PF00860	Permease family
A3L09_09860	PF01325	Iron dependent repressor, N-terminal DNA binding domain
A3L09_09860	PF02742	Iron dependent repressor, metal binding and dimerisation domain
A3L09_09865	PF14464	Prokaryotic homologs of the JAB domain
A3L09_09870	PF01042	Endoribonuclease L-PSP
A3L09_09875	PF10869	Protein of unknown function (DUF2666)
A3L09_09880	PF01078	Magnesium chelatase, subunit ChlI
A3L09_09880	PF05362	Lon protease (S16) C-terminal proteolytic domain
A3L09_09880	PF13654	AAA domain
A3L09_09890	PF01037	AsnC family
A3L09_09890	PF13412	Winged helix-turn-helix DNA-binding
A3L09_09895	PF01940	A3L09_09895
A3L09_09900	PF02926	THUMP domain
A3L09_09900	PF14419	AF2226-like SPOUT RNA Methylase fused to THUMP
A3L09_09905	PF01798	Putative snoRNA binding domain
A3L09_09910	PF01269	Fibrillarin
A3L09_09915	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
A3L09_09920	PF00108	Thiolase, N-terminal domain
A3L09_09920	PF02803	Thiolase, C-terminal domain
A3L09_09925	PF01796	A3L09_09925
A3L09_09925	PF12172	Rubredoxin-like zinc ribbon domain (DUF35_N)
A3L09_09935	PF00583	Acetyltransferase (GNAT) family
A3L09_09940	PF01381	Helix-turn-helix
A3L09_09945	PF01850	PIN domain
A3L09_09950	PF04009	A3L09_09950
A3L09_09955	PF04458	A3L09_09955
A3L09_09960	PF01972	Serine dehydrogenase proteinase
A3L09_09965	PF00352	Transcription factor TFIID (or TATA-binding protein, TBP)
A3L09_09975	PF05123	A3L09_09975
A3L09_09975	PF05124	A3L09_09975
A3L09_09985	PF04055	Radical SAM superfamily
A3L09_09985	PF13353	4Fe-4S single cluster domain
A3L09_09990	PF01522	Polysaccharide deacetylase
A3L09_09995	PF00534	Glycosyl transferases group 1
A3L09_09995	PF13439	Glycosyltransferase Family 4
A3L09_10000	PF03706	A3L09_10000
A3L09_10005	PF03819	MazG nucleotide pyrophosphohydrolase domain
A3L09_10010	PF01022	Bacterial regulatory protein, arsR family
A3L09_10015	PF00586	AIR synthase related protein, N-terminal domain
A3L09_10015	PF02769	AIR synthase related protein, C-terminal domain
A3L09_10020	PF13263	PHP-associated
A3L09_10025	PF00571	CBS domain
A3L09_10025	PF00654	Voltage gated chloride channel
A3L09_10035	PF00491	Arginase family
A3L09_10045	PF07728	AAA domain (dynein-related subfamily)
A3L09_10050	PF04411	A3L09_10050
A3L09_10050	PF09823	A3L09_10050
A3L09_10055	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L09_10060	PF00037	4Fe-4S binding domain
A3L09_10060	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L09_10060	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L09_10065	PF01850	PIN domain
A3L09_10070	PF13380	CoA binding domain
A3L09_10070	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L09_10075	PF13483	Beta-lactamase superfamily domain
A3L09_10080	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L09_10080	PF00483	Nucleotidyl transferase
A3L09_10085	PF16363	A3L09_10085
A3L09_10090	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
A3L09_10095	PF04321	RmlD substrate binding domain
A3L09_10100	PF01943	A3L09_10100
A3L09_10100	PF14667	Polysaccharide biosynthesis C-terminal domain
A3L09_10105	PF13847	Methyltransferase domain
A3L09_10110	PF00534	Glycosyl transferases group 1
A3L09_10120	PF00534	Glycosyl transferases group 1
A3L09_10120	PF13439	Glycosyltransferase Family 4
A3L09_10130	PF02223	Thymidylate kinase
A3L09_10135	PF00534	Glycosyl transferases group 1
A3L09_10135	PF13439	Glycosyltransferase Family 4
A3L09_10140	PF00534	Glycosyl transferases group 1
A3L09_10140	PF13439	Glycosyltransferase Family 4
A3L09_10145	PF04101	Glycosyltransferase family 28 C-terminal domain
A3L09_10150	PF08660	A3L09_10150
A3L09_10155	PF00535	Glycosyl transferase family 2
A3L09_10160	PF00535	Glycosyl transferase family 2
A3L09_10170	PF01882	A3L09_10170
A3L09_10175	PF07726	ATPase family associated with various cellular activities (AAA)
A3L09_10180	PF14258	A3L09_10180
A3L09_10200	PF07760	A3L09_10200
A3L09_10205	PF02516	Oligosaccharyl transferase STT3 subunit
A3L09_10210	PF13242	HAD-hyrolase-like
A3L09_10210	PF13344	Haloacid dehalogenase-like hydrolase
A3L09_10215	PF02915	Rubrerythrin
A3L09_10220	PF00317	Ribonucleotide reductase, all-alpha domain
A3L09_10220	PF02867	Ribonucleotide reductase, barrel domain
A3L09_10220	PF03477	ATP cone domain
A3L09_10225	PF00156	Phosphoribosyl transferase domain
A3L09_10235	PF02834	LigT like Phosphoesterase
A3L09_10240	PF01909	Nucleotidyltransferase domain
A3L09_10240	PF09249	tRNA nucleotidyltransferase, second domain
A3L09_10255	PF02566	OsmC-like protein
A3L09_10260	PF00892	EamA-like transporter family
A3L09_10265	PF05763	A3L09_10265
A3L09_10280	PF13620	Carboxypeptidase regulatory-like domain
A3L09_10290	PF00535	Glycosyl transferase family 2
A3L09_10300	PF02516	Oligosaccharyl transferase STT3 subunit
A3L09_10320	PF00892	EamA-like transporter family
A3L09_10325	PF01571	Aminomethyltransferase folate-binding domain
A3L09_10325	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L09_10330	PF00582	Universal stress protein family
A3L09_10335	PF01949	Protein of unknown function DUF99
A3L09_10340	PF03091	CutA1 divalent ion tolerance protein
A3L09_10345	PF00708	Acylphosphatase
A3L09_10355	PF04104	Eukaryotic and archaeal DNA primase, large subunit
A3L09_10360	PF01896	Eukaryotic and archaeal DNA primase small subunit
A3L09_10365	PF00892	EamA-like transporter family
A3L09_10385	PF01886	A3L09_10385
A3L09_10390	PF00120	Glutamine synthetase, catalytic domain
A3L09_10390	PF03951	Glutamine synthetase, beta-Grasp domain
A3L09_10395	PF00892	EamA-like transporter family
A3L09_10405	PF00005	ABC transporter
A3L09_10405	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_10410	PF00005	ABC transporter
A3L09_10410	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L09_10415	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_10415	PF12911	A3L09_10415
A3L09_10420	PF00528	Binding-protein-dependent transport system inner membrane component
A3L09_10425	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L09_10430	PF01979	Amidohydrolase family
A3L09_10435	PF00175	Oxidoreductase NAD-binding domain
A3L09_10435	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L09_10445	PF01849	NAC domain
A3L09_10460	PF01850	PIN domain
A3L09_10465	PF13429	Tetratricopeptide repeat
A3L09_10470	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
A3L09_10470	PF09153	Domain of unknown function (DUF1938)
A3L09_10475	PF00588	SpoU rRNA Methylase family
A3L09_10485	PF02558	Ketopantoate reductase PanE/ApbA
A3L09_10485	PF08546	Ketopantoate reductase PanE/ApbA C terminal
A3L09_10490	PF01865	Protein of unknown function DUF47
A3L09_10495	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L09_10495	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L09_10500	PF05681	A3L09_10500
A3L09_10505	PF05683	Fumarase C-terminus
A3L09_10510	PF00390	Malic enzyme, N-terminal domain
A3L09_10510	PF03949	Malic enzyme, NAD binding domain
A3L09_10515	PF00149	Calcineurin-like phosphoesterase
A3L09_10530	PF03099	Biotin/lipoate A/B protein ligase family
A3L09_10535	PF02676	Methyltransferase TYW3
A3L09_10550	PF03729	A3L09_10550
A3L09_10555	PF03692	A3L09_10555
A3L09_10560	PF03657	Uncharacterised protein family (UPF0113)
A3L09_10565	PF06745	KaiC
A3L09_10575	PF02675	S-adenosylmethionine decarboxylase
A3L09_10580	PF02355	Protein export membrane protein
A3L09_10585	PF02355	Protein export membrane protein
A3L09_10590	PF02080	TrkA-C domain
A3L09_10590	PF02254	TrkA-N domain
A3L09_10615	PF13245	Part of AAA domain
A3L09_10615	PF13361	UvrD-like helicase C-terminal domain
A3L09_10625	PF07669	Eco57I restriction-modification methylase
A3L09_10645	PF08843	Nucleotidyl transferase of unknown function (DUF1814)
A3L09_10650	PF00271	Helicase conserved C-terminal domain
A3L09_10650	PF13091	PLD-like domain
A3L09_10655	PF04033	Domain of unknown function (DUF365)
A3L09_10660	PF00705	Proliferating cell nuclear antigen, N-terminal domain
A3L09_10675	PF01047	MarR family
A3L09_10690	PF09079	CDC6, C terminal
A3L09_10690	PF13401	AAA domain
A3L09_10705	PF06757	Insect allergen related repeat, nitrile-specifier detoxification