locus-tag	class	description
A3L11_00020	PF03437	BtpA family
A3L11_00050	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L11_00050	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L11_00050	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L11_00050	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L11_00055	PF04307	LexA-binding, inner membrane-associated putative hydrolase
A3L11_00070	PF01121	Dephospho-CoA kinase
A3L11_00090	PF02748	Aspartate carbamoyltransferase regulatory chain, metal binding domain
A3L11_00090	PF01948	Aspartate carbamoyltransferase regulatory chain, allosteric domain
A3L11_00095	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A3L11_00095	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A3L11_00100	PF08543	Phosphomethylpyrimidine kinase
A3L11_00100	PF10120	Thiamine-phosphate synthase
A3L11_00135	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_00135	PF03129	Anticodon binding domain
A3L11_00135	PF04073	Aminoacyl-tRNA editing domain
A3L11_00140	PF02272	DHHA1 domain
A3L11_00140	PF01411	tRNA synthetases class II (A)
A3L11_00140	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_00150	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
A3L11_00150	PF01871	AMMECR1
A3L11_00170	PF00227	Proteasome subunit
A3L11_00175	PF00005	ABC transporter
A3L11_00180	PF01032	FecCD transport family
A3L11_00190	PF00814	Glycoprotease family
A3L11_00190	PF00583	Acetyltransferase (GNAT) family
A3L11_00205	PF00155	Aminotransferase class I and II
A3L11_00215	PF17864	RuvB AAA lid domain
A3L11_00215	PF05491	RuvB C-terminal winged helix domain
A3L11_00215	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_00220	PF05491	RuvB C-terminal winged helix domain
A3L11_00220	PF17864	RuvB AAA lid domain
A3L11_00220	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_00225	PF00306	ATP synthase alpha/beta chain, C terminal domain
A3L11_00225	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L11_00225	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L11_00240	PF06463	Molybdenum Cofactor Synthesis C
A3L11_00240	PF04055	Radical SAM superfamily
A3L11_00270	PF06745	KaiC
A3L11_00285	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
A3L11_00285	PF14572	Phosphoribosyl synthetase-associated domain
A3L11_00310	PF06559	2'-deoxycytidine 5'-triphosphate deaminase (DCD)
A3L11_00335	PF01921	tRNA synthetases class I (K)
A3L11_00340	PF01979	Amidohydrolase family
A3L11_00360	PF01112	Asparaginase
A3L11_00365	PF07690	Major Facilitator Superfamily
A3L11_00370	PF06968	Biotin and Thiamin Synthesis associated domain
A3L11_00370	PF04055	Radical SAM superfamily
A3L11_00385	PF07690	Major Facilitator Superfamily
A3L11_00390	PF01434	Peptidase family M41
A3L11_00390	PF06480	FtsH Extracellular
A3L11_00390	PF17862	AAA+ lid domain
A3L11_00390	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_00405	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
A3L11_00405	PF00953	Glycosyl transferase family 4
A3L11_00410	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_00420	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
A3L11_00425	PF01435	Peptidase family M48
A3L11_00460	PF00175	Oxidoreductase NAD-binding domain 
A3L11_00460	PF00970	Oxidoreductase FAD-binding domain
A3L11_00460	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_00465	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_00465	PF13247	4Fe-4S dicluster domain
A3L11_00465	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_00495	PF01883	Iron-sulfur cluster assembly protein
A3L11_00505	PF01861	Branched-chain polyamine synthase A C-terminal domain
A3L11_00530	PF06508	Queuosine biosynthesis protein QueC
A3L11_00535	PF01180	Dihydroorotate dehydrogenase
A3L11_00545	PF17806	Sarcosine oxidase A3 domain
A3L11_00545	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_00545	PF01571	Aminomethyltransferase folate-binding domain
A3L11_00545	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_00560	PF01266	FAD dependent oxidoreductase
A3L11_00575	PF18113	Rubredoxin binding C-terminal domain
A3L11_00575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_00580	PF01040	UbiA prenyltransferase family
A3L11_00590	PF01885	RNA 2'-phosphotransferase, Tpt1 / KptA family
A3L11_00610	PF11975	Family 4 glycosyl hydrolase C-terminal domain
A3L11_00610	PF02056	Family 4 glycosyl hydrolase
A3L11_00620	PF07690	Major Facilitator Superfamily
A3L11_00630	PF00288	GHMP kinases N terminal domain
A3L11_00630	PF08544	GHMP kinases C terminal 
A3L11_00630	PF10509	Galactokinase galactose-binding signature
A3L11_00635	PF16350	FAD dependent oxidoreductase central domain
A3L11_00635	PF01571	Aminomethyltransferase folate-binding domain
A3L11_00635	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_00635	PF01266	FAD dependent oxidoreductase
A3L11_00640	PF17806	Sarcosine oxidase A3 domain
A3L11_00640	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_00640	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_00640	PF01571	Aminomethyltransferase folate-binding domain
A3L11_00645	PF00474	Sodium:solute symporter family
A3L11_00670	PF01926	50S ribosome-binding GTPase
A3L11_00670	PF01018	GTP1/OBG
A3L11_00670	PF09269	Domain of unknown function (DUF1967)
A3L11_00675	PF01037	Lrp/AsnC ligand binding domain
A3L11_00700	PF00231	ATP synthase
A3L11_00705	PF01914	MarC family integral membrane protein
A3L11_00710	PF02566	OsmC-like protein
A3L11_00715	PF04055	Radical SAM superfamily
A3L11_00720	PF07722	Peptidase C26
A3L11_00725	PF00155	Aminotransferase class I and II
A3L11_00730	PF01008	Initiation factor 2 subunit family
A3L11_00745	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
A3L11_00745	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
A3L11_00750	PF02803	Thiolase, C-terminal domain
A3L11_00750	PF00108	Thiolase, N-terminal domain
A3L11_00790	PF00850	Histone deacetylase domain
A3L11_00825	PF00474	Sodium:solute symporter family
A3L11_00855	PF17284	Spermidine synthase tetramerisation domain
A3L11_00880	PF00361	Proton-conducting membrane transporter
A3L11_00910	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_00915	PF01899	Na+/H+ ion antiporter subunit
A3L11_00920	PF01597	Glycine cleavage H-protein
A3L11_00925	PF13439	Glycosyltransferase Family 4
A3L11_00930	PF13247	4Fe-4S dicluster domain
A3L11_00930	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_00930	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_00935	PF00175	Oxidoreductase NAD-binding domain 
A3L11_00935	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_00935	PF00970	Oxidoreductase FAD-binding domain
A3L11_00945	PF08704	tRNA methyltransferase complex GCD14 subunit
A3L11_00965	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L11_00970	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_00980	PF00005	ABC transporter
A3L11_00980	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_00985	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_00985	PF00005	ABC transporter
A3L11_00995	PF08459	UvrC Helix-hairpin-helix N-terminal
A3L11_00995	PF01541	GIY-YIG catalytic domain
A3L11_00995	PF02151	UvrB/uvrC motif
A3L11_01005	PF02535	ZIP Zinc transporter
A3L11_01020	PF00005	ABC transporter
A3L11_01025	PF01381	Helix-turn-helix
A3L11_01070	PF00091	Tubulin/FtsZ family, GTPase domain
A3L11_01070	PF12327	FtsZ family, C-terminal domain
A3L11_01075	PF13614	AAA domain
A3L11_01085	PF00294	pfkB family carbohydrate kinase
A3L11_01085	PF01467	Cytidylyltransferase-like
A3L11_01095	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L11_01110	PF01066	CDP-alcohol phosphatidyltransferase
A3L11_01110	PF00483	Nucleotidyl transferase
A3L11_01135	PF00005	ABC transporter
A3L11_01150	PF13344	Haloacid dehalogenase-like hydrolase
A3L11_01150	PF00293	NUDIX domain
A3L11_01180	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A3L11_01180	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A3L11_01185	PF00265	Thymidine kinase
A3L11_01190	PF00291	Pyridoxal-phosphate dependent enzyme
A3L11_01225	PF00294	pfkB family carbohydrate kinase
A3L11_01230	PF00535	Glycosyl transferase family 2
A3L11_01235	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
A3L11_01235	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
A3L11_01240	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
A3L11_01240	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
A3L11_01250	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_01260	PF03459	TOBE domain
A3L11_01260	PF17912	MalK OB fold domain
A3L11_01260	PF00005	ABC transporter
A3L11_01270	PF13660	Domain of unknown function (DUF4147)
A3L11_01270	PF05161	MOFRL family
A3L11_01300	PF13380	CoA binding domain
A3L11_01330	PF01894	Uncharacterised protein family UPF0047
A3L11_01335	PF01926	50S ribosome-binding GTPase
A3L11_01335	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
A3L11_01355	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_01360	PF00005	ABC transporter
A3L11_01360	PF08402	TOBE domain
A3L11_01365	PF01980	tRNA-methyltransferase O
A3L11_01365	PF18389	TrmO C-terminal domain
A3L11_01370	PF17863	AAA lid domain
A3L11_01370	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_01395	PF00128	Alpha amylase, catalytic domain
A3L11_01395	PF01833	IPT/TIG domain
A3L11_01395	PF02806	Alpha amylase, C-terminal all-beta domain
A3L11_01395	PF00686	Starch binding domain
A3L11_01405	PF01523	Putative modulator of DNA gyrase
A3L11_01420	PF01523	Putative modulator of DNA gyrase
A3L11_01440	PF03600	Citrate transporter
A3L11_01455	PF01546	Peptidase family M20/M25/M40
A3L11_01455	PF07687	Peptidase dimerisation domain
A3L11_01465	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L11_01465	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L11_01475	PF02558	Ketopantoate reductase PanE/ApbA
A3L11_01475	PF08546	Ketopantoate reductase PanE/ApbA C terminal
A3L11_01480	PF00588	SpoU rRNA Methylase family
A3L11_01485	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
A3L11_01485	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
A3L11_01515	PF01926	50S ribosome-binding GTPase
A3L11_01515	PF13167	GTP-binding GTPase N-terminal
A3L11_01515	PF16360	GTP-binding GTPase Middle Region
A3L11_01525	PF01384	Phosphate transporter family
A3L11_01540	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_01540	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_01545	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_01555	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_01555	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_01560	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_01570	PF12800	4Fe-4S binding domain
A3L11_01570	PF13247	4Fe-4S dicluster domain
A3L11_01575	PF13247	4Fe-4S dicluster domain
A3L11_01575	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_01575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_01585	PF03063	Prismane/CO dehydrogenase family
A3L11_01590	PF13247	4Fe-4S dicluster domain
A3L11_01590	PF12800	4Fe-4S binding domain
A3L11_01595	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_01610	PF01032	FecCD transport family
A3L11_01615	PF00005	ABC transporter
A3L11_01620	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_01620	PF01883	Iron-sulfur cluster assembly protein
A3L11_01645	PF00294	pfkB family carbohydrate kinase
A3L11_01655	PF00708	Acylphosphatase
A3L11_01665	PF01949	Protein of unknown function DUF99
A3L11_01670	PF00582	Universal stress protein family
A3L11_01675	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A3L11_01675	PF01571	Aminomethyltransferase folate-binding domain
A3L11_01695	PF08241	Methyltransferase domain
A3L11_01740	PF00005	ABC transporter
A3L11_01765	PF00696	Amino acid kinase family
A3L11_01770	PF01593	Flavin containing amine oxidoreductase
A3L11_01790	PF01950	Fructose-1,6-bisphosphatase
A3L11_01810	PF01037	Lrp/AsnC ligand binding domain
A3L11_01810	PF13404	AsnC-type helix-turn-helix domain
A3L11_01815	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_01825	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_01830	PF00156	Phosphoribosyl transferase domain
A3L11_01845	PF01068	ATP dependent DNA ligase domain
A3L11_01845	PF04675	DNA ligase N terminus
A3L11_01845	PF04679	ATP dependent DNA ligase C terminal region        
A3L11_01865	PF03553	Na+/H+ antiporter family
A3L11_01870	PF03167	Uracil DNA glycosylase superfamily
A3L11_01880	PF04055	Radical SAM superfamily
A3L11_01880	PF06463	Molybdenum Cofactor Synthesis C
A3L11_01895	PF03788	LrgA family
A3L11_01900	PF04172	LrgB-like family 
A3L11_01930	PF00596	Class II Aldolase and Adducin N-terminal domain
A3L11_01940	PF02572	ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
A3L11_01940	PF12557	Cob(I)alamin adenosyltransferase N terminal 
A3L11_01950	PF18339	RapA N-terminal Tudor like domain 1
A3L11_01950	PF00176	SNF2 family N-terminal domain
A3L11_01950	PF12137	RNA polymerase recycling family C-terminal
A3L11_01950	PF00271	Helicase conserved C-terminal domain
A3L11_01950	PF18337	RapA N-terminal Tudor like domain
A3L11_02015	PF03099	Biotin/lipoate A/B protein ligase family
A3L11_02035	PF01244	Membrane dipeptidase (Peptidase family M19)
A3L11_02050	PF01555	DNA methylase
A3L11_02070	PF00326	Prolyl oligopeptidase family
A3L11_02070	PF07676	WD40-like Beta Propeller Repeat
A3L11_02095	PF01384	Phosphate transporter family
A3L11_02125	PF01938	TRAM domain
A3L11_02125	PF04055	Radical SAM superfamily
A3L11_02125	PF00919	Uncharacterized protein family UPF0004
A3L11_02135	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_02135	PF01938	TRAM domain
A3L11_02135	PF02475	Met-10+ like-protein
A3L11_02145	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_02150	PF03334	Na+/H+ antiporter subunit
A3L11_02170	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L11_02175	PF00361	Proton-conducting membrane transporter
A3L11_02185	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_02190	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L11_02195	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_02195	PF00374	Nickel-dependent hydrogenase
A3L11_02200	PF00146	NADH dehydrogenase
A3L11_02205	PF12838	4Fe-4S dicluster domain
A3L11_02215	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_02220	PF03334	Na+/H+ antiporter subunit
A3L11_02235	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
A3L11_02240	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L11_02245	PF00361	Proton-conducting membrane transporter
A3L11_02255	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_02260	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L11_02260	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_02265	PF00374	Nickel-dependent hydrogenase
A3L11_02265	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_02270	PF00146	NADH dehydrogenase
A3L11_02275	PF12838	4Fe-4S dicluster domain
A3L11_02300	PF05491	RuvB C-terminal winged helix domain
A3L11_02300	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_02300	PF17864	RuvB AAA lid domain
A3L11_02320	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_02335	PF00202	Aminotransferase class-III
A3L11_02350	PF01791	DeoC/LacD family aldolase
A3L11_02365	PF03952	Enolase, N-terminal domain
A3L11_02365	PF00113	Enolase, C-terminal TIM barrel domain
A3L11_02395	PF13404	AsnC-type helix-turn-helix domain
A3L11_02395	PF01037	Lrp/AsnC ligand binding domain
A3L11_02400	PF01725	Ham1 family
A3L11_02420	PF02391	MoaE protein
A3L11_02430	PF00899	ThiF family
A3L11_02450	PF03176	MMPL family
A3L11_02470	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_02470	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
A3L11_02470	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
A3L11_02485	PF01513	ATP-NAD kinase
A3L11_02495	PF00814	Glycoprotease family
A3L11_02515	PF00294	pfkB family carbohydrate kinase
A3L11_02515	PF01467	Cytidylyltransferase-like
A3L11_02565	PF00520	Ion transport protein
A3L11_02565	PF00027	Cyclic nucleotide-binding domain
A3L11_02590	PF01048	Phosphorylase superfamily
A3L11_02605	PF01979	Amidohydrolase family
A3L11_02610	PF16193	AAA C-terminal domain
A3L11_02610	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A3L11_02610	PF01661	Macro domain
A3L11_02610	PF12002	MgsA AAA+ ATPase C terminal
A3L11_02625	PF01256	Carbohydrate kinase
A3L11_02625	PF03853	YjeF-related protein N-terminus
A3L11_02635	PF02806	Alpha amylase, C-terminal all-beta domain
A3L11_02635	PF00128	Alpha amylase, catalytic domain
A3L11_02690	PF06463	Molybdenum Cofactor Synthesis C
A3L11_02690	PF04055	Radical SAM superfamily
A3L11_02700	PF01557	Fumarylacetoacetate (FAA) hydrolase family
A3L11_02720	PF01170	Putative RNA methylase family UPF0020
A3L11_02720	PF02926	THUMP domain
A3L11_02720	PF10672	S-adenosylmethionine-dependent methyltransferase
A3L11_02725	PF01926	50S ribosome-binding GTPase
A3L11_02745	PF00437	Type II/IV secretion system protein
A3L11_02760	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A3L11_02785	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_02785	PF17863	AAA lid domain
A3L11_02800	PF00294	pfkB family carbohydrate kinase
A3L11_02805	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
A3L11_02825	PF01494	FAD binding domain
A3L11_02830	PF01470	Pyroglutamyl peptidase
A3L11_02855	PF13635	Domain of unknown function (DUF4143)
A3L11_02855	PF13173	AAA domain
A3L11_02860	PF01171	PP-loop family
A3L11_02865	PF13180	PDZ domain
A3L11_02870	PF00535	Glycosyl transferase family 2
A3L11_02900	PF01925	Sulfite exporter TauE/SafE
A3L11_02930	PF14306	PUA-like domain
A3L11_02930	PF01747	ATP-sulfurylase
A3L11_02940	PF01545	Cation efflux family
A3L11_02940	PF16916	Dimerisation domain of Zinc Transporter
A3L11_02945	PF00282	Pyridoxal-dependent decarboxylase conserved domain
A3L11_02950	PF00999	Sodium/hydrogen exchanger family
A3L11_02975	PF03065	Glycosyl hydrolase family 57
A3L11_02975	PF09095	Domain of unknown function (DUF1926)
A3L11_02975	PF09094	Domain of unknown function (DUF1925)
A3L11_02990	PF01171	PP-loop family
A3L11_03000	PF00571	CBS domain
A3L11_03000	PF00478	IMP dehydrogenase / GMP reductase domain
A3L11_03005	PF00999	Sodium/hydrogen exchanger family
A3L11_03010	PF00999	Sodium/hydrogen exchanger family
A3L11_03020	PF13393	Histidyl-tRNA synthetase
A3L11_03020	PF03129	Anticodon binding domain
A3L11_03040	PF02272	DHHA1 domain
A3L11_03040	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_03040	PF01411	tRNA synthetases class II (A)
A3L11_03050	PF01784	NIF3 (NGG1p interacting factor 3)
A3L11_03095	PF06745	KaiC
A3L11_03105	PF02675	S-adenosylmethionine decarboxylase 
A3L11_03110	PF07549	SecD/SecF GG Motif
A3L11_03110	PF02355	Protein export membrane protein
A3L11_03120	PF02080	TrkA-C domain
A3L11_03120	PF02254	TrkA-N domain
A3L11_03130	PF01496	V-type ATPase 116kDa subunit family  
A3L11_03140	PF01991	ATP synthase (E/31 kDa) subunit
A3L11_03150	PF01990	ATP synthase (F/14-kDa) subunit
A3L11_03155	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L11_03155	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L11_03155	PF16886	ATPsynthase alpha/beta subunit N-term extension
A3L11_03160	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A3L11_03160	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A3L11_03165	PF01813	ATP synthase subunit D 
A3L11_03170	PF02272	DHHA1 domain
A3L11_03170	PF01411	tRNA synthetases class II (A)
A3L11_03170	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_03190	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_03190	PF00970	Oxidoreductase FAD-binding domain
A3L11_03190	PF00175	Oxidoreductase NAD-binding domain 
A3L11_03195	PF01979	Amidohydrolase family
A3L11_03205	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_03210	PF12911	N-terminal TM domain of oligopeptide transport permease C
A3L11_03210	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_03215	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_03215	PF00005	ABC transporter
A3L11_03220	PF00005	ABC transporter
A3L11_03220	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_03230	PF02540	NAD synthase
A3L11_03240	PF00120	Glutamine synthetase, catalytic domain
A3L11_03240	PF03951	Glutamine synthetase, beta-Grasp domain
A3L11_03280	PF06745	KaiC
A3L11_03300	PF10672	S-adenosylmethionine-dependent methyltransferase
A3L11_03300	PF17785	PUA-like domain
A3L11_03320	PF01546	Peptidase family M20/M25/M40
A3L11_03320	PF07687	Peptidase dimerisation domain
A3L11_03330	PF03169	OPT oligopeptide transporter protein
A3L11_03335	PF00753	Metallo-beta-lactamase superfamily
A3L11_03335	PF12706	Beta-lactamase superfamily domain
A3L11_03340	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L11_03340	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L11_03340	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L11_03340	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L11_03350	PF03459	TOBE domain
A3L11_03350	PF17912	MalK OB fold domain
A3L11_03350	PF00005	ABC transporter
A3L11_03360	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_03365	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_03375	PF00128	Alpha amylase, catalytic domain
A3L11_03375	PF02903	Alpha amylase, N-terminal ig-like domain
A3L11_03375	PF16657	Maltogenic Amylase, C-terminal domain
A3L11_03380	PF01978	Sugar-specific transcriptional regulator TrmB
A3L11_03380	PF11495	Archaeal transcriptional regulator TrmB
A3L11_03385	PF00534	Glycosyl transferases group 1
A3L11_03385	PF08323	Starch synthase catalytic domain
A3L11_03415	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_03415	PF08264	Anticodon-binding domain of tRNA
A3L11_03425	PF00892	EamA-like transporter family
A3L11_03455	PF00156	Phosphoribosyl transferase domain
A3L11_03465	PF02867	Ribonucleotide reductase, barrel domain
A3L11_03465	PF00317	Ribonucleotide reductase, all-alpha domain
A3L11_03465	PF03477	ATP cone domain
A3L11_03475	PF13344	Haloacid dehalogenase-like hydrolase
A3L11_03490	PF13579	Glycosyl transferase 4-like domain
A3L11_03490	PF00534	Glycosyl transferases group 1
A3L11_03495	PF00535	Glycosyl transferase family 2
A3L11_03500	PF13439	Glycosyltransferase Family 4
A3L11_03500	PF00534	Glycosyl transferases group 1
A3L11_03525	PF00483	Nucleotidyl transferase
A3L11_03540	PF01370	NAD dependent epimerase/dehydratase family
A3L11_03565	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_03565	PF17863	AAA lid domain
A3L11_03605	PF00483	Nucleotidyl transferase
A3L11_03610	PF16363	GDP-mannose 4,6 dehydratase
A3L11_03625	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
A3L11_03630	PF04321	RmlD substrate binding domain
A3L11_03650	PF01676	Metalloenzyme superfamily
A3L11_03650	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
A3L11_03660	PF00535	Glycosyl transferase family 2
A3L11_03670	PF00535	Glycosyl transferase family 2
A3L11_03685	PF00535	Glycosyl transferase family 2
A3L11_03735	PF00118	TCP-1/cpn60 chaperonin family
A3L11_03765	PF00478	IMP dehydrogenase / GMP reductase domain
A3L11_03765	PF00571	CBS domain
A3L11_03775	PF00890	FAD binding domain
A3L11_03775	PF02910	Fumarate reductase flavoprotein C-term
A3L11_03780	PF02445	Quinolinate synthetase A protein
A3L11_03790	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
A3L11_03790	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
A3L11_03795	PF01680	SOR/SNZ family
A3L11_03800	PF01174	SNO glutamine amidotransferase family
A3L11_03805	PF00384	Molybdopterin oxidoreductase
A3L11_03805	PF01568	Molydopterin dinucleotide binding domain
A3L11_03805	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L11_03810	PF00156	Phosphoribosyl transferase domain
A3L11_03815	PF01259	SAICAR synthetase
A3L11_03820	PF02769	AIR synthase related protein, C-terminal domain
A3L11_03820	PF00586	AIR synthase related protein, N-terminal domain
A3L11_03825	PF02222	ATP-grasp domain
A3L11_03830	PF00731	AIR carboxylase
A3L11_03835	PF02844	Phosphoribosylglycinamide synthetase, N domain
A3L11_03835	PF02843	Phosphoribosylglycinamide synthetase, C domain
A3L11_03835	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
A3L11_03855	PF02769	AIR synthase related protein, C-terminal domain
A3L11_03855	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
A3L11_03855	PF00586	AIR synthase related protein, N-terminal domain
A3L11_03865	PF00117	Glutamine amidotransferase class-I
A3L11_03865	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_03865	PF00958	GMP synthase C terminal domain
A3L11_03880	PF02540	NAD synthase
A3L11_03880	PF00958	GMP synthase C terminal domain
A3L11_03880	PF00117	Glutamine amidotransferase class-I
A3L11_03945	PF13847	Methyltransferase domain
A3L11_03945	PF17827	PrmC N-terminal domain
A3L11_03970	PF00575	S1 RNA binding domain
A3L11_03975	PF00719	Inorganic pyrophosphatase
A3L11_04035	PF00535	Glycosyl transferase family 2
A3L11_04040	PF02225	PA domain
A3L11_04040	PF04389	Peptidase family M28
A3L11_04060	PF00795	Carbon-nitrogen hydrolase
A3L11_04120	PF01906	Putative heavy-metal-binding
A3L11_04155	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_04155	PF01029	NusB family
A3L11_04160	PF00924	Mechanosensitive ion channel
A3L11_04205	PF09107	Elongation factor SelB, winged helix 
A3L11_04205	PF09106	Elongation factor SelB, winged helix 
A3L11_04205	PF09105	Elongation factor SelB, winged helix 
A3L11_04205	PF03144	Elongation factor Tu domain 2
A3L11_04205	PF00009	Elongation factor Tu GTP binding domain
A3L11_04230	PF01926	50S ribosome-binding GTPase
A3L11_04235	PF12802	MarR family
A3L11_04235	PF00717	Peptidase S24-like
A3L11_04290	PF00860	Permease family
A3L11_04300	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_04305	PF03576	Peptidase family S58 
A3L11_04325	PF01910	Thiamine-binding protein
A3L11_04330	PF01871	AMMECR1
A3L11_04345	PF01029	NusB family
A3L11_04345	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_04365	PF03104	DNA polymerase family B, exonuclease domain
A3L11_04365	PF00136	DNA polymerase family B
A3L11_04375	PF01850	PIN domain
A3L11_04405	PF07690	Major Facilitator Superfamily
A3L11_04410	PF03725	3' exoribonuclease family, domain 2
A3L11_04410	PF00013	KH domain
A3L11_04410	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_04410	PF01138	3' exoribonuclease family, domain 1
A3L11_04410	PF00575	S1 RNA binding domain
A3L11_04435	PF03551	Transcriptional regulator PadR-like family
A3L11_04440	PF01008	Initiation factor 2 subunit family
A3L11_04440	PF03061	Thioesterase superfamily
A3L11_04450	PF00857	Isochorismatase family
A3L11_04490	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_04520	PF01230	HIT domain
A3L11_04530	PF00227	Proteasome subunit
A3L11_04540	PF00575	S1 RNA binding domain
A3L11_04540	PF00013	KH domain
A3L11_04540	PF03725	3' exoribonuclease family, domain 2
A3L11_04540	PF01138	3' exoribonuclease family, domain 1
A3L11_04540	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_04545	PF00575	S1 RNA binding domain
A3L11_04545	PF00013	KH domain
A3L11_04545	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_04545	PF03725	3' exoribonuclease family, domain 2
A3L11_04545	PF01138	3' exoribonuclease family, domain 1
A3L11_04550	PF00013	KH domain
A3L11_04550	PF00575	S1 RNA binding domain
A3L11_04550	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_04550	PF01138	3' exoribonuclease family, domain 1
A3L11_04580	PF03447	Homoserine dehydrogenase, NAD binding domain
A3L11_04580	PF00742	Homoserine dehydrogenase
A3L11_04580	PF01842	ACT domain
A3L11_04585	PF00571	CBS domain
A3L11_04585	PF01380	SIS domain
A3L11_04590	PF03977	Na+-transporting oxaloacetate decarboxylase beta subunit
A3L11_04595	PF00364	Biotin-requiring enzyme
A3L11_04595	PF00682	HMGL-like
A3L11_04595	PF02436	Conserved carboxylase domain
A3L11_04605	PF01039	Carboxyl transferase domain
A3L11_04615	PF03796	DnaB-like helicase C terminal domain
A3L11_04615	PF14528	LAGLIDADG-like domain
A3L11_04615	PF00772	DnaB-like helicase N terminal domain
A3L11_04640	PF01137	RNA 3'-terminal phosphate cyclase
A3L11_04640	PF05189	RNA 3'-terminal phosphate cyclase (RTC), insert domain
A3L11_04675	PF00374	Nickel-dependent hydrogenase
A3L11_04685	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_04700	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
A3L11_04700	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A3L11_04700	PF00037	4Fe-4S binding domain
A3L11_04705	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_04705	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A3L11_04705	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A3L11_04715	PF00266	Aminotransferase class-V
A3L11_04720	PF00152	tRNA synthetases class II (D, K and N) 
A3L11_04720	PF01336	OB-fold nucleic acid binding domain
A3L11_04735	PF00266	Aminotransferase class-V
A3L11_04780	PF00297	Ribosomal protein L3
A3L11_04790	PF00276	Ribosomal protein L23
A3L11_04795	PF03947	Ribosomal Proteins L2, C-terminal domain
A3L11_04795	PF00181	Ribosomal Proteins L2, RNA binding domain
A3L11_04800	PF00203	Ribosomal protein S19
A3L11_04805	PF00237	Ribosomal protein L22p/L17e
A3L11_04810	PF07650	KH domain
A3L11_04810	PF00189	Ribosomal protein S3, C-terminal domain
A3L11_04815	PF00831	Ribosomal L29 protein
A3L11_04820	PF01253	Translation initiation factor SUI1
A3L11_04830	PF00366	Ribosomal protein S17
A3L11_04835	PF00238	Ribosomal protein L14p/L23e
A3L11_04840	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
A3L11_04840	PF00467	KOW motif
A3L11_04850	PF00673	ribosomal L5P family C-terminus
A3L11_04850	PF00281	Ribosomal protein L5
A3L11_04860	PF00410	Ribosomal protein S8
A3L11_04865	PF00347	Ribosomal protein L6
A3L11_04880	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
A3L11_04885	PF00333	Ribosomal protein S5, N-terminal domain
A3L11_04885	PF03719	Ribosomal protein S5, C-terminal domain
A3L11_04890	PF00327	Ribosomal protein L30p/L7e
A3L11_04895	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
A3L11_04935	PF01509	TruB family pseudouridylate synthase (N terminal domain)
A3L11_04935	PF16198	tRNA pseudouridylate synthase B C-terminal domain
A3L11_04940	PF05175	Methyltransferase small domain
A3L11_04950	PF00416	Ribosomal protein S13/S18
A3L11_04955	PF01479	S4 domain
A3L11_04955	PF00163	Ribosomal protein S4/S9 N-terminal domain
A3L11_04960	PF00411	Ribosomal protein S11
A3L11_04965	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
A3L11_04965	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
A3L11_04965	PF01000	RNA polymerase Rpb3/RpoA insert domain
A3L11_04980	PF00572	Ribosomal protein L13
A3L11_04985	PF00380	Ribosomal protein S9/S16
A3L11_05005	PF00113	Enolase, C-terminal TIM barrel domain
A3L11_05005	PF03952	Enolase, N-terminal domain
A3L11_05010	PF00318	Ribosomal protein S2
A3L11_05045	PF01037	Lrp/AsnC ligand binding domain
A3L11_05055	PF00156	Phosphoribosyl transferase domain
A3L11_05070	PF02881	SRP54-type protein, helical bundle domain
A3L11_05070	PF00448	SRP54-type protein, GTPase domain
A3L11_05070	PF02978	Signal peptide binding domain
A3L11_05085	PF01048	Phosphorylase superfamily
A3L11_05090	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L11_05090	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_05105	PF01048	Phosphorylase superfamily
A3L11_05110	PF00291	Pyridoxal-phosphate dependent enzyme
A3L11_05115	PF01875	Memo-like protein
A3L11_05125	PF00288	GHMP kinases N terminal domain
A3L11_05125	PF08544	GHMP kinases C terminal 
A3L11_05125	PF10509	Galactokinase galactose-binding signature
A3L11_05135	PF18267	Rubredoxin NAD+ reductase C-terminal domain
A3L11_05135	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
A3L11_05135	PF04324	BFD-like [2Fe-2S] binding domain
A3L11_05135	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_05145	PF13247	4Fe-4S dicluster domain
A3L11_05150	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L11_05150	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L11_05155	PF01070	FMN-dependent dehydrogenase
A3L11_05165	PF00753	Metallo-beta-lactamase superfamily
A3L11_05165	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
A3L11_05165	PF17770	Ribonuclease J C-terminal domain
A3L11_05170	PF00348	Polyprenyl synthetase
A3L11_05175	PF07690	Major Facilitator Superfamily
A3L11_05190	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_05190	PF08264	Anticodon-binding domain of tRNA
A3L11_05190	PF09334	tRNA synthetases class I (M)
A3L11_05190	PF13603	Leucyl-tRNA synthetase, Domain 2
A3L11_05200	PF07969	Amidohydrolase family
A3L11_05205	PF01321	Creatinase/Prolidase N-terminal domain
A3L11_05205	PF00557	Metallopeptidase family M24
A3L11_05250	PF08753	NikR C terminal nickel binding domain
A3L11_05250	PF01402	Ribbon-helix-helix protein, copG family
A3L11_05265	PF09210	Domain of unknown function (DUF1957)
A3L11_05265	PF03065	Glycosyl hydrolase family 57
A3L11_05270	PF00543	Nitrogen regulatory protein P-II
A3L11_05280	PF00209	Sodium:neurotransmitter symporter family
A3L11_05285	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A3L11_05285	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
A3L11_05300	PF00227	Proteasome subunit
A3L11_05305	PF10996	Beta-Casp domain
A3L11_05305	PF00753	Metallo-beta-lactamase superfamily
A3L11_05305	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
A3L11_05310	PF00291	Pyridoxal-phosphate dependent enzyme
A3L11_05320	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
A3L11_05340	PF01554	MatE
A3L11_05355	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
A3L11_05355	PF00391	PEP-utilising enzyme, mobile domain
A3L11_05355	PF02896	PEP-utilising enzyme, TIM barrel domain
A3L11_05380	PF00082	Subtilase family
A3L11_05395	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A3L11_05395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_05405	PF04055	Radical SAM superfamily
A3L11_05405	PF01926	50S ribosome-binding GTPase
A3L11_05405	PF01018	GTP1/OBG
A3L11_05415	PF01513	ATP-NAD kinase
A3L11_05425	PF00266	Aminotransferase class-V
A3L11_05435	PF02769	AIR synthase related protein, C-terminal domain
A3L11_05435	PF00586	AIR synthase related protein, N-terminal domain
A3L11_05440	PF00708	Acylphosphatase
A3L11_05440	PF17788	HypF Kae1-like domain
A3L11_05440	PF01300	Telomere recombination
A3L11_05440	PF07503	HypF finger
A3L11_05445	PF01924	Hydrogenase formation hypA family
A3L11_05450	PF01455	HupF/HypC family
A3L11_05455	PF12804	MobA-like NTP transferase domain
A3L11_05470	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_05480	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L11_05480	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L11_05515	PF00005	ABC transporter
A3L11_05520	PF01458	Uncharacterized protein family (UPF0051)
A3L11_05520	PF14528	LAGLIDADG-like domain
A3L11_05525	PF00005	ABC transporter
A3L11_05575	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
A3L11_05575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_05595	PF05547	Immune inhibitor A peptidase M6
A3L11_05595	PF00801	PKD domain
A3L11_05600	PF00753	Metallo-beta-lactamase superfamily
A3L11_05600	PF12706	Beta-lactamase superfamily domain
A3L11_05620	PF06560	Glucose-6-phosphate isomerase (GPI)
A3L11_05630	PF01050	Mannose-6-phosphate isomerase
A3L11_05630	PF00483	Nucleotidyl transferase
A3L11_05640	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A3L11_05640	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A3L11_05640	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A3L11_05640	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A3L11_05655	PF01138	3' exoribonuclease family, domain 1
A3L11_05655	PF00013	KH domain
A3L11_05655	PF03725	3' exoribonuclease family, domain 2
A3L11_05655	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A3L11_05655	PF00575	S1 RNA binding domain
A3L11_05690	PF00155	Aminotransferase class I and II
A3L11_05720	PF05199	GMC oxidoreductase
A3L11_05720	PF00732	GMC oxidoreductase
A3L11_05725	PF00177	Ribosomal protein S7p/S5e
A3L11_05745	PF04997	RNA polymerase Rpb1, domain 1
A3L11_05745	PF04983	RNA polymerase Rpb1, domain 3
A3L11_05745	PF05000	RNA polymerase Rpb1, domain 4
A3L11_05745	PF04998	RNA polymerase Rpb1, domain 5
A3L11_05745	PF00623	RNA polymerase Rpb1, domain 2
A3L11_05750	PF04983	RNA polymerase Rpb1, domain 3
A3L11_05750	PF05000	RNA polymerase Rpb1, domain 4
A3L11_05750	PF00623	RNA polymerase Rpb1, domain 2
A3L11_05750	PF04998	RNA polymerase Rpb1, domain 5
A3L11_05750	PF04997	RNA polymerase Rpb1, domain 1
A3L11_05755	PF04563	RNA polymerase beta subunit
A3L11_05755	PF00562	RNA polymerase Rpb2, domain 6
A3L11_05755	PF10385	RNA polymerase beta subunit external 1 domain
A3L11_05755	PF04560	RNA polymerase Rpb2, domain 7
A3L11_05755	PF04565	RNA polymerase Rpb2, domain 3
A3L11_05755	PF04561	RNA polymerase Rpb2, domain 2
A3L11_05785	PF02347	Glycine cleavage system P-protein
A3L11_05790	PF02347	Glycine cleavage system P-protein
A3L11_05845	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_05845	PF04324	BFD-like [2Fe-2S] binding domain
A3L11_05850	PF01266	FAD dependent oxidoreductase
A3L11_05855	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
A3L11_05855	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
A3L11_05870	PF03009	Glycerophosphoryl diester phosphodiesterase family
A3L11_05875	PF03009	Glycerophosphoryl diester phosphodiesterase family
A3L11_05885	PF00083	Sugar (and other) transporter
A3L11_05890	PF12697	Alpha/beta hydrolase family
A3L11_05905	PF00005	ABC transporter
A3L11_05915	PF02223	Thymidylate kinase
A3L11_05925	PF00483	Nucleotidyl transferase
A3L11_05935	PF11897	Protein of unknown function (DUF3417)
A3L11_05935	PF00343	Carbohydrate phosphorylase
A3L11_05945	PF00749	tRNA synthetases class I (E and Q), catalytic domain
A3L11_05945	PF03950	tRNA synthetases class I (E and Q), anti-codon binding domain
A3L11_05970	PF00692	dUTPase
A3L11_05990	PF00687	Ribosomal protein L1p/L10e family
A3L11_05995	PF00298	Ribosomal protein L11, RNA binding domain
A3L11_05995	PF03946	Ribosomal protein L11, N-terminal domain
A3L11_06010	PF00091	Tubulin/FtsZ family, GTPase domain
A3L11_06010	PF12327	FtsZ family, C-terminal domain
A3L11_06020	PF16868	NMT1-like family
A3L11_06060	PF01751	Toprim domain
A3L11_06060	PF01396	Topoisomerase DNA binding C4 zinc finger
A3L11_06060	PF01131	DNA topoisomerase
A3L11_06065	PF01494	FAD binding domain
A3L11_06080	PF13192	Thioredoxin domain
A3L11_06080	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_06090	PF09827	CRISPR associated protein Cas2
A3L11_06120	PF00270	DEAD/DEAH box helicase
A3L11_06120	PF18019	HD domain
A3L11_06120	PF18395	Cas3 C-terminal domain
A3L11_06145	PF01867	CRISPR associated protein Cas1
A3L11_06165	PF18395	Cas3 C-terminal domain
A3L11_06165	PF18019	HD domain
A3L11_06165	PF00270	DEAD/DEAH box helicase
A3L11_06195	PF00583	Acetyltransferase (GNAT) family
A3L11_06195	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L11_06195	PF13380	CoA binding domain
A3L11_06215	PF17915	Reverse gyrase zinc finger
A3L11_06215	PF00270	DEAD/DEAH box helicase
A3L11_06215	PF01131	DNA topoisomerase
A3L11_06215	PF01751	Toprim domain
A3L11_06255	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L11_06265	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_06280	PF01966	HD domain
A3L11_06290	PF00152	tRNA synthetases class II (D, K and N) 
A3L11_06290	PF01336	OB-fold nucleic acid binding domain
A3L11_06305	PF01142	tRNA pseudouridine synthase D (TruD)
A3L11_06320	PF01546	Peptidase family M20/M25/M40
A3L11_06320	PF07687	Peptidase dimerisation domain
A3L11_06390	PF06418	CTP synthase N-terminus
A3L11_06390	PF00117	Glutamine amidotransferase class-I
A3L11_06410	PF09269	Domain of unknown function (DUF1967)
A3L11_06410	PF01926	50S ribosome-binding GTPase
A3L11_06410	PF01018	GTP1/OBG
A3L11_06415	PF12706	Beta-lactamase superfamily domain
A3L11_06425	PF00483	Nucleotidyl transferase
A3L11_06430	PF00478	IMP dehydrogenase / GMP reductase domain
A3L11_06430	PF00571	CBS domain
A3L11_06440	PF00557	Metallopeptidase family M24
A3L11_06445	PF02386	Cation transport protein
A3L11_06450	PF00005	ABC transporter
A3L11_06490	PF00132	Bacterial transferase hexapeptide (six repeats)
A3L11_06495	PF01255	Putative undecaprenyl diphosphate synthase
A3L11_06510	PF03129	Anticodon binding domain
A3L11_06510	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_06510	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_06560	PF01343	Peptidase family S49
A3L11_06570	PF01594	AI-2E family transporter
A3L11_06575	PF00809	Pterin binding enzyme
A3L11_06595	PF00005	ABC transporter
A3L11_06600	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
A3L11_06605	PF17757	UvrB interaction domain
A3L11_06605	PF12344	Ultra-violet resistance protein B
A3L11_06605	PF02151	UvrB/uvrC motif
A3L11_06605	PF04851	Type III restriction enzyme, res subunit
A3L11_06605	PF00271	Helicase conserved C-terminal domain
A3L11_06610	PF01416	tRNA pseudouridine synthase
A3L11_06615	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
A3L11_06615	PF03484	tRNA synthetase B5 domain
A3L11_06620	PF01409	tRNA synthetases class II core domain (F)
A3L11_06640	PF03683	Uncharacterised protein family (UPF0175)
A3L11_06645	PF08240	Alcohol dehydrogenase GroES-like domain
A3L11_06645	PF00107	Zinc-binding dehydrogenase
A3L11_06650	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_06660	PF02637	GatB domain
A3L11_06660	PF02934	GatB/GatE catalytic domain
A3L11_06665	PF00710	Asparaginase, N-terminal
A3L11_06665	PF17763	Glutaminase/Asparaginase C-terminal domain
A3L11_06695	PF00398	Ribosomal RNA adenine dimethylase
A3L11_06705	PF01938	TRAM domain
A3L11_06705	PF00919	Uncharacterized protein family UPF0004
A3L11_06705	PF04055	Radical SAM superfamily
A3L11_06730	PF01522	Polysaccharide deacetylase
A3L11_06745	PF02769	AIR synthase related protein, C-terminal domain
A3L11_06745	PF00586	AIR synthase related protein, N-terminal domain
A3L11_06750	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
A3L11_06750	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
A3L11_06760	PF00654	Voltage gated chloride channel
A3L11_06775	PF00999	Sodium/hydrogen exchanger family
A3L11_06790	PF00491	Arginase family
A3L11_06810	PF16653	Saccharopine dehydrogenase C-terminal domain
A3L11_06810	PF03435	Saccharopine dehydrogenase NADP binding domain
A3L11_06825	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
A3L11_06825	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_06825	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
A3L11_06850	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A3L11_06850	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A3L11_06865	PF02511	Thymidylate synthase complementing protein
A3L11_06875	PF01230	HIT domain
A3L11_06880	PF01699	Sodium/calcium exchanger protein
A3L11_06885	PF01676	Metalloenzyme superfamily
A3L11_06885	PF10143	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
A3L11_06890	PF03167	Uracil DNA glycosylase superfamily
A3L11_06905	PF00248	Aldo/keto reductase family
A3L11_06920	PF09334	tRNA synthetases class I (M)
A3L11_06920	PF01588	Putative tRNA binding domain
A3L11_06920	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_06940	PF01368	DHH family
A3L11_06940	PF02272	DHHA1 domain
A3L11_06940	PF03948	Ribosomal protein L9, C-terminal domain
A3L11_06940	PF01281	Ribosomal protein L9, N-terminal domain
A3L11_06995	PF04055	Radical SAM superfamily
A3L11_07000	PF01434	Peptidase family M41
A3L11_07000	PF17862	AAA+ lid domain
A3L11_07000	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_07000	PF06480	FtsH Extracellular
A3L11_07040	PF01161	Phosphatidylethanolamine-binding protein
A3L11_07080	PF00202	Aminotransferase class-III
A3L11_07085	PF00860	Permease family
A3L11_07105	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A3L11_07110	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A3L11_07115	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_07125	PF00361	Proton-conducting membrane transporter
A3L11_07130	PF00361	Proton-conducting membrane transporter
A3L11_07135	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A3L11_07140	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
A3L11_07140	PF00361	Proton-conducting membrane transporter
A3L11_07140	PF13244	Domain of unknown function (DUF4040)
A3L11_07140	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A3L11_07150	PF03334	Na+/H+ antiporter subunit
A3L11_07155	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
A3L11_07160	PF01899	Na+/H+ ion antiporter subunit
A3L11_07170	PF04055	Radical SAM superfamily
A3L11_07170	PF06463	Molybdenum Cofactor Synthesis C
A3L11_07190	PF02350	UDP-N-acetylglucosamine 2-epimerase
A3L11_07195	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
A3L11_07195	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
A3L11_07195	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
A3L11_07215	PF00750	tRNA synthetases class I (R)
A3L11_07215	PF05746	DALR anticodon binding domain
A3L11_07215	PF03485	Arginyl tRNA synthetase N terminal domain
A3L11_07225	PF00701	Dihydrodipicolinate synthetase family
A3L11_07315	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_07315	PF02926	THUMP domain
A3L11_07320	PF01940	Integral membrane protein DUF92
A3L11_07325	PF01037	Lrp/AsnC ligand binding domain
A3L11_07325	PF13404	AsnC-type helix-turn-helix domain
A3L11_07330	PF03819	MazG nucleotide pyrophosphohydrolase domain
A3L11_07335	PF01022	Bacterial regulatory protein, arsR family
A3L11_07345	PF01042	Endoribonuclease L-PSP
A3L11_07355	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
A3L11_07355	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_07355	PF05362	Lon protease (S16) C-terminal proteolytic domain
A3L11_07360	PF00005	ABC transporter
A3L11_07365	PF01458	Uncharacterized protein family (UPF0051)
A3L11_07380	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A3L11_07385	PF10418	Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
A3L11_07385	PF00175	Oxidoreductase NAD-binding domain 
A3L11_07400	PF00005	ABC transporter
A3L11_07415	PF01497	Periplasmic binding protein
A3L11_07425	PF01381	Helix-turn-helix
A3L11_07460	PF04493	Endonuclease V
A3L11_07470	PF01941	S-adenosylmethionine synthetase (AdoMet synthetase)
A3L11_07480	PF01202	Shikimate kinase
A3L11_07490	PF00155	Aminotransferase class I and II
A3L11_07505	PF02543	Carbamoyltransferase N-terminus
A3L11_07505	PF16861	Carbamoyltransferase C-terminus
A3L11_07515	PF09180	Prolyl-tRNA synthetase, C-terminal
A3L11_07515	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_07515	PF03129	Anticodon binding domain
A3L11_07520	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L11_07520	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L11_07530	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
A3L11_07540	PF01925	Sulfite exporter TauE/SafE
A3L11_07550	PF01925	Sulfite exporter TauE/SafE
A3L11_07570	PF01588	Putative tRNA binding domain
A3L11_07570	PF08264	Anticodon-binding domain of tRNA
A3L11_07570	PF09334	tRNA synthetases class I (M)
A3L11_07620	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_07625	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L11_07625	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_07625	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_07645	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_07650	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A3L11_07650	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A3L11_07650	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A3L11_07665	PF01975	Survival protein SurE
A3L11_07670	PF00448	SRP54-type protein, GTPase domain
A3L11_07670	PF02881	SRP54-type protein, helical bundle domain
A3L11_07670	PF02978	Signal peptide binding domain
A3L11_07685	PF02608	ABC transporter substrate-binding protein PnrA-like
A3L11_07720	PF01406	tRNA synthetases class I (C) catalytic domain
A3L11_07720	PF09190	DALR domain
A3L11_07725	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A3L11_07740	PF00474	Sodium:solute symporter family
A3L11_07750	PF02897	Prolyl oligopeptidase, N-terminal beta-propeller domain
A3L11_07750	PF00326	Prolyl oligopeptidase family
A3L11_07760	PF00271	Helicase conserved C-terminal domain
A3L11_07760	PF08494	DEAD/H associated
A3L11_07760	PF00271	Helicase conserved C-terminal domain
A3L11_07760	PF08494	DEAD/H associated
A3L11_07760	PF00270	DEAD/DEAH box helicase
A3L11_07760	PF00270	DEAD/DEAH box helicase
A3L11_07770	PF00535	Glycosyl transferase family 2
A3L11_07775	PF01384	Phosphate transporter family
A3L11_07780	PF01702	Queuine tRNA-ribosyltransferase
A3L11_07845	PF05343	M42 glutamyl aminopeptidase
A3L11_07875	PF07690	Major Facilitator Superfamily
A3L11_07880	PF01923	Cobalamin adenosyltransferase
A3L11_07890	PF01008	Initiation factor 2 subunit family
A3L11_07905	PF18146	Damage-inducible protein CinA KH domain
A3L11_07905	PF00994	Probable molybdopterin binding domain
A3L11_07905	PF02464	Competence-damaged protein
A3L11_07910	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A3L11_07910	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
A3L11_07915	PF03222	Tryptophan/tyrosine permease family
A3L11_07920	PF02594	Uncharacterised ACR, YggU family COG1872
A3L11_07935	PF01934	Protein of unknown function DUF86
A3L11_07940	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_07940	PF03129	Anticodon binding domain
A3L11_07945	PF00128	Alpha amylase, catalytic domain
A3L11_07945	PF02903	Alpha amylase, N-terminal ig-like domain
A3L11_07945	PF16657	Maltogenic Amylase, C-terminal domain
A3L11_07960	PF01554	MatE
A3L11_07980	PF02585	GlcNAc-PI de-N-acetylase
A3L11_07995	PF00232	Glycosyl hydrolase family 1
A3L11_08000	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
A3L11_08005	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_08010	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_08010	PF12911	N-terminal TM domain of oligopeptide transport permease C
A3L11_08015	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_08015	PF00005	ABC transporter
A3L11_08020	PF00005	ABC transporter
A3L11_08020	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A3L11_08025	PF01380	SIS domain
A3L11_08030	PF01301	Glycosyl hydrolases family 35
A3L11_08035	PF02005	N2,N2-dimethylguanosine tRNA methyltransferase
A3L11_08050	PF00557	Metallopeptidase family M24
A3L11_08050	PF01321	Creatinase/Prolidase N-terminal domain
A3L11_08080	PF07670	Nucleoside recognition
A3L11_08080	PF07664	Ferrous iron transport protein B C terminus
A3L11_08080	PF17910	FeoB cytosolic helical domain
A3L11_08080	PF02421	Ferrous iron transport protein B
A3L11_08090	PF00483	Nucleotidyl transferase
A3L11_08110	PF02441	Flavoprotein
A3L11_08125	PF06071	Protein of unknown function (DUF933)
A3L11_08125	PF01926	50S ribosome-binding GTPase
A3L11_08135	PF12706	Beta-lactamase superfamily domain
A3L11_08140	PF01544	CorA-like Mg2+ transporter protein
A3L11_08145	PF01177	Asp/Glu/Hydantoin racemase
A3L11_08155	PF01523	Putative modulator of DNA gyrase
A3L11_08165	PF13173	AAA domain
A3L11_08165	PF13635	Domain of unknown function (DUF4143)
A3L11_08175	PF00565	Staphylococcal nuclease homologue
A3L11_08200	PF10458	Valyl tRNA synthetase tRNA binding arm
A3L11_08200	PF00133	tRNA synthetases class I (I, L, M and V)
A3L11_08200	PF08264	Anticodon-binding domain of tRNA
A3L11_08220	PF00994	Probable molybdopterin binding domain
A3L11_08225	PF03454	MoeA C-terminal region (domain IV)
A3L11_08225	PF00994	Probable molybdopterin binding domain
A3L11_08225	PF03453	MoeA N-terminal region (domain I and II)
A3L11_08250	PF01966	HD domain
A3L11_08260	PF13302	Acetyltransferase (GNAT) domain
A3L11_08265	PF00128	Alpha amylase, catalytic domain
A3L11_08265	PF02903	Alpha amylase, N-terminal ig-like domain
A3L11_08270	PF00005	ABC transporter
A3L11_08270	PF17755	UvrA DNA-binding domain
A3L11_08270	PF17760	UvrA interaction domain
A3L11_08295	PF01916	Deoxyhypusine synthase
A3L11_08305	PF00857	Isochorismatase family
A3L11_08310	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_08320	PF01435	Peptidase family M48
A3L11_08325	PF01435	Peptidase family M48
A3L11_08335	PF00118	TCP-1/cpn60 chaperonin family
A3L11_08345	PF00069	Protein kinase domain
A3L11_08350	PF01713	Smr domain
A3L11_08350	PF00488	MutS domain V
A3L11_08360	PF01967	MoaC family
A3L11_08365	PF00005	ABC transporter
A3L11_08375	PF12679	ABC-2 family transporter protein
A3L11_08380	PF01139	tRNA-splicing ligase RtcB
A3L11_08390	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
A3L11_08390	PF01189	16S rRNA methyltransferase RsmB/F
A3L11_08390	PF13636	RNA-binding PUA-like domain of methyltransferase RsmF
A3L11_08410	PF02548	Ketopantoate hydroxymethyltransferase
A3L11_08415	PF00535	Glycosyl transferase family 2
A3L11_08445	PF01205	Uncharacterized protein family UPF0029
A3L11_08445	PF09186	Domain of unknown function (DUF1949)
A3L11_08450	PF00270	DEAD/DEAH box helicase
A3L11_08450	PF09369	Domain of unknown function (DUF1998)
A3L11_08450	PF00271	Helicase conserved C-terminal domain
A3L11_08465	PF01867	CRISPR associated protein Cas1
A3L11_08470	PF09827	CRISPR associated protein Cas2
A3L11_08495	PF18211	Csm1 subunit domain B
A3L11_08495	PF01966	HD domain
A3L11_08540	PF00005	ABC transporter
A3L11_08550	PF02769	AIR synthase related protein, C-terminal domain
A3L11_08550	PF00586	AIR synthase related protein, N-terminal domain
A3L11_08595	PF13635	Domain of unknown function (DUF4143)
A3L11_08595	PF13173	AAA domain
A3L11_08610	PF01938	TRAM domain
A3L11_08610	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_08615	PF02730	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L11_08615	PF01314	Aldehyde ferredoxin oxidoreductase, domains 2 & 3
A3L11_08640	PF00338	Ribosomal protein S10p/S20e
A3L11_08645	PF00009	Elongation factor Tu GTP binding domain
A3L11_08645	PF03144	Elongation factor Tu domain 2
A3L11_08645	PF03143	Elongation factor Tu C-terminal domain
A3L11_08655	PF00679	Elongation factor G C-terminus
A3L11_08655	PF14492	Elongation Factor G, domain II
A3L11_08655	PF03764	Elongation factor G, domain IV
A3L11_08655	PF00009	Elongation factor Tu GTP binding domain
A3L11_08655	PF03144	Elongation factor Tu domain 2
A3L11_08670	PF01966	HD domain
A3L11_08675	PF13732	Domain of unknown function (DUF4162)
A3L11_08675	PF00005	ABC transporter
A3L11_08715	PF02649	Type I GTP cyclohydrolase folE2
A3L11_08730	PF12102	Domain of unknown function (DUF3578)
A3L11_08730	PF07728	AAA domain (dynein-related subfamily)
A3L11_08770	PF00005	ABC transporter
A3L11_08780	PF01351	Ribonuclease HII
A3L11_08805	PF01380	SIS domain
A3L11_08820	PF01209	ubiE/COQ5 methyltransferase family
A3L11_08825	PF01910	Thiamine-binding protein
A3L11_08840	PF05191	Adenylate kinase, active site lid
A3L11_08855	PF13520	Amino acid permease
A3L11_08865	PF02887	Pyruvate kinase, alpha/beta domain
A3L11_08865	PF00224	Pyruvate kinase, barrel domain
A3L11_08865	PF00391	PEP-utilising enzyme, mobile domain
A3L11_08870	PF00578	AhpC/TSA family
A3L11_08910	PF00999	Sodium/hydrogen exchanger family
A3L11_08915	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
A3L11_08920	PF02641	Uncharacterized ACR, COG1993
A3L11_08925	PF02441	Flavoprotein
A3L11_08925	PF04127	DNA / pantothenate metabolism flavoprotein
A3L11_08930	PF00924	Mechanosensitive ion channel
A3L11_08930	PF05552	Conserved TM helix
A3L11_08935	PF13614	AAA domain
A3L11_08940	PF01177	Asp/Glu/Hydantoin racemase
A3L11_08975	PF07690	Major Facilitator Superfamily
A3L11_08995	PF00005	ABC transporter
A3L11_09020	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_09030	PF02146	Sir2 family
A3L11_09035	PF00464	Serine hydroxymethyltransferase
A3L11_09065	PF01568	Molydopterin dinucleotide binding domain
A3L11_09065	PF00384	Molybdopterin oxidoreductase
A3L11_09065	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A3L11_09070	PF10417	C-terminal domain of 1-Cys peroxiredoxin
A3L11_09070	PF00578	AhpC/TSA family
A3L11_09095	PF00005	ABC transporter
A3L11_09120	PF13302	Acetyltransferase (GNAT) domain
A3L11_09145	PF01206	Sulfurtransferase TusA
A3L11_09160	PF01641	SelR domain
A3L11_09160	PF01625	Peptide methionine sulfoxide reductase
A3L11_09170	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A3L11_09175	PF00210	Ferritin-like domain
A3L11_09185	PF00753	Metallo-beta-lactamase superfamily
A3L11_09185	PF00258	Flavodoxin
A3L11_09190	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A3L11_09190	PF14759	Reductase C-terminal
A3L11_09195	PF02915	Rubrerythrin
A3L11_09200	PF00301	Rubredoxin
A3L11_09205	PF01880	Desulfoferrodoxin
A3L11_09240	PF01475	Ferric uptake regulator family
A3L11_09270	PF00005	ABC transporter
A3L11_09295	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
A3L11_09295	PF03120	NAD-dependent DNA ligase OB-fold domain
A3L11_09295	PF01653	NAD-dependent DNA ligase adenylation domain
A3L11_09295	PF00533	BRCA1 C Terminus (BRCT) domain
A3L11_09295	PF12826	Helix-hairpin-helix motif
A3L11_09320	PF01867	CRISPR associated protein Cas1
A3L11_09325	PF09827	CRISPR associated protein Cas2
A3L11_09335	PF00270	DEAD/DEAH box helicase
A3L11_09335	PF18019	HD domain
A3L11_09335	PF18395	Cas3 C-terminal domain
A3L11_09350	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A3L11_09350	PF01411	tRNA synthetases class II (A)
A3L11_09350	PF02272	DHHA1 domain
A3L11_09360	PF00375	Sodium:dicarboxylate symporter family
A3L11_09365	PF08279	HTH domain
A3L11_09365	PF03099	Biotin/lipoate A/B protein ligase family
A3L11_09365	PF02237	Biotin protein ligase C terminal domain
A3L11_09370	PF01791	DeoC/LacD family aldolase
A3L11_09375	PF00682	HMGL-like
A3L11_09375	PF02436	Conserved carboxylase domain
A3L11_09375	PF00364	Biotin-requiring enzyme
A3L11_09380	PF02554	Carbon starvation protein CstA
A3L11_09380	PF13722	5TM C-terminal transporter carbon starvation CstA
A3L11_09395	PF17886	HSP20-like domain found in ArsA
A3L11_09395	PF02374	Anion-transporting ATPase
A3L11_09420	PF12146	Serine aminopeptidase, S33
A3L11_09440	PF00709	Adenylosuccinate synthetase
A3L11_09445	PF16363	GDP-mannose 4,6 dehydratase
A3L11_09460	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_09465	PF01883	Iron-sulfur cluster assembly protein
A3L11_09465	PF10609	NUBPL iron-transfer P-loop NTPase
A3L11_09535	PF09828	Chromate resistance exported protein
A3L11_09545	PF02001	Protein of unknown function  DUF134
A3L11_09550	PF10397	Adenylosuccinate lyase C-terminus
A3L11_09550	PF00206	Lyase
A3L11_09570	PF03266	NTPase
A3L11_09575	PF01008	Initiation factor 2 subunit family
A3L11_09595	PF00465	Iron-containing alcohol dehydrogenase 
A3L11_09600	PF07690	Major Facilitator Superfamily
A3L11_09605	PF08494	DEAD/H associated
A3L11_09605	PF00270	DEAD/DEAH box helicase
A3L11_09605	PF00271	Helicase conserved C-terminal domain
A3L11_09615	PF01546	Peptidase family M20/M25/M40
A3L11_09615	PF07687	Peptidase dimerisation domain
A3L11_09620	PF00753	Metallo-beta-lactamase superfamily
A3L11_09635	PF01026	TatD related DNase
A3L11_09650	PF00701	Dihydrodipicolinate synthetase family
A3L11_09685	PF13304	AAA domain, putative AbiEii toxin, Type IV TA system
A3L11_09685	PF13304	AAA domain, putative AbiEii toxin, Type IV TA system
A3L11_09705	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A3L11_09705	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A3L11_09710	PF01938	TRAM domain
A3L11_09710	PF05958	tRNA (Uracil-5-)-methyltransferase
A3L11_09735	PF04760	Translation initiation factor IF-2, N-terminal region
A3L11_09735	PF08364	Bacterial translation initiation factor IF-2 associated region
A3L11_09735	PF11987	Translation-initiation factor 2
A3L11_09735	PF00009	Elongation factor Tu GTP binding domain
A3L11_09745	PF00334	Nucleoside diphosphate kinase
A3L11_09775	PF01507	Phosphoadenosine phosphosulfate reductase family
A3L11_09785	PF01145	SPFH domain / Band 7 family
A3L11_09795	PF01979	Amidohydrolase family
A3L11_09800	PF00152	tRNA synthetases class II (D, K and N) 
A3L11_09800	PF01336	OB-fold nucleic acid binding domain
A3L11_09835	PF01699	Sodium/calcium exchanger protein
A3L11_09850	PF08351	Domain of unknown function (DUF1726)
A3L11_09850	PF13718	GNAT acetyltransferase 2
A3L11_09850	PF05127	Helicase
A3L11_09850	PF17176	tRNA-binding domain
A3L11_09870	PF14010	Phosphoenolpyruvate carboxylase
A3L11_09885	PF02632	BioY family
A3L11_09890	PF00005	ABC transporter
A3L11_09895	PF02361	Cobalt transport protein
A3L11_09920	PF01037	Lrp/AsnC ligand binding domain
A3L11_09920	PF13404	AsnC-type helix-turn-helix domain
A3L11_09940	PF00528	Binding-protein-dependent transport system inner membrane component
A3L11_09945	PF08402	TOBE domain
A3L11_09945	PF00005	ABC transporter
A3L11_09970	PF00162	Phosphoglycerate kinase
A3L11_09985	PF00005	ABC transporter
A3L11_09985	PF13732	Domain of unknown function (DUF4162)
A3L11_09995	PF02811	PHP domain
A3L11_10000	PF02310	B12 binding domain
A3L11_10000	PF01642	Methylmalonyl-CoA mutase
A3L11_10020	PF06470	SMC proteins Flexible Hinge Domain
A3L11_10020	PF02463	RecF/RecN/SMC N terminal domain
A3L11_10035	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
A3L11_10035	PF00533	BRCA1 C Terminus (BRCT) domain
A3L11_10035	PF01653	NAD-dependent DNA ligase adenylation domain
A3L11_10035	PF03120	NAD-dependent DNA ligase OB-fold domain
A3L11_10035	PF12826	Helix-hairpin-helix motif
A3L11_10055	PF00271	Helicase conserved C-terminal domain
A3L11_10055	PF00270	DEAD/DEAH box helicase
A3L11_10070	PF01884	PcrB family
A3L11_10085	PF00591	Glycosyl transferase family, a/b domain
A3L11_10085	PF02885	Glycosyl transferase family, helical bundle domain
A3L11_10085	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
A3L11_10100	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_10105	PF01145	SPFH domain / Band 7 family
A3L11_10105	PF16200	C-terminal region of band_7
A3L11_10120	PF00730	HhH-GPD superfamily base excision DNA repair protein
A3L11_10145	PF01520	N-acetylmuramoyl-L-alanine amidase
A3L11_10145	PF04122	Putative cell wall binding repeat 2
A3L11_10155	PF03746	LamB/YcsF family
A3L11_10160	PF02682	Carboxyltransferase domain, subdomain C and D
A3L11_10165	PF02626	Carboxyltransferase domain, subdomain A and B 
A3L11_10175	PF00465	Iron-containing alcohol dehydrogenase 
A3L11_10185	PF00459	Inositol monophosphatase family
A3L11_10200	PF04851	Type III restriction enzyme, res subunit
A3L11_10200	PF13307	Helicase C-terminal domain
A3L11_10230	PF17746	SfsA N-terminal OB domain
A3L11_10230	PF03749	Sugar fermentation stimulation protein RE domain
A3L11_10245	PF02899	Phage integrase, N-terminal SAM-like domain
A3L11_10245	PF00589	Phage integrase family
A3L11_10260	PF17645	Arylmalonate decarboxylase
A3L11_10265	PF00881	Nitroreductase family
A3L11_10275	PF02926	THUMP domain
A3L11_10275	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_10285	PF02568	Thiamine biosynthesis protein (ThiI)
A3L11_10285	PF02926	THUMP domain
A3L11_10300	PF00583	Acetyltransferase (GNAT) family
A3L11_10300	PF13607	Succinyl-CoA ligase like flavodoxin domain
A3L11_10300	PF13380	CoA binding domain
A3L11_10310	PF01261	Xylose isomerase-like TIM barrel
A3L11_10335	PF00633	Helix-hairpin-helix motif
A3L11_10335	PF00730	HhH-GPD superfamily base excision DNA repair protein
A3L11_10335	PF10576	Iron-sulfur binding domain of endonuclease III
A3L11_10345	PF02545	Maf-like protein
A3L11_10370	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A3L11_10380	PF13537	Glutamine amidotransferase domain
A3L11_10380	PF00733	Asparagine synthase
A3L11_10390	PF13439	Glycosyltransferase Family 4
A3L11_10390	PF00534	Glycosyl transferases group 1
A3L11_10395	PF03481	Putative GTP-binding controlling metal-binding
A3L11_10395	PF01300	Telomere recombination
A3L11_10420	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A3L11_10420	PF02403	Seryl-tRNA synthetase N-terminal domain
A3L11_10425	PF03453	MoeA N-terminal region (domain I and II)
A3L11_10425	PF03454	MoeA C-terminal region (domain IV)
A3L11_10425	PF00994	Probable molybdopterin binding domain
A3L11_10450	PF06480	FtsH Extracellular
A3L11_10450	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_10450	PF17862	AAA+ lid domain
A3L11_10450	PF01434	Peptidase family M41
A3L11_10560	PF00005	ABC transporter
A3L11_10575	PF00011	Hsp20/alpha crystallin family
A3L11_10580	PF17862	AAA+ lid domain
A3L11_10580	PF00004	ATPase family associated with various cellular activities (AAA)
A3L11_10580	PF01434	Peptidase family M41
A3L11_10580	PF06480	FtsH Extracellular
A3L11_10625	PF12706	Beta-lactamase superfamily domain
A3L11_10630	PF00881	Nitroreductase family
A3L11_10640	PF08264	Anticodon-binding domain of tRNA
A3L11_10640	PF01588	Putative tRNA binding domain
A3L11_10640	PF09334	tRNA synthetases class I (M)
A3L11_10655	PF13302	Acetyltransferase (GNAT) domain
A3L11_10695	PF00583	Acetyltransferase (GNAT) family
A3L11_10705	PF02517	CPBP intramembrane metalloprotease
A3L11_10720	PF00664	ABC transporter transmembrane region
A3L11_10720	PF00005	ABC transporter
A3L11_10725	PF00005	ABC transporter
A3L11_10725	PF00664	ABC transporter transmembrane region
A3L11_10730	PF01467	Cytidylyltransferase-like
A3L11_10730	PF00293	NUDIX domain
A3L11_10755	PF13419	Haloacid dehalogenase-like hydrolase
A3L11_10805	PF04199	Putative cyclase
A3L11_10810	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A3L11_10810	PF05221	S-adenosyl-L-homocysteine hydrolase
A3L11_10835	PF07726	ATPase family associated with various cellular activities (AAA)
A3L11_10835	PF17863	AAA lid domain
