locus-tag class description CDI07_00010 PF00483 Nucleotidyl transferase CDI07_00015 PF00132 Bacterial transferase hexapeptide (six repeats) CDI07_00015 PF00483 Nucleotidyl transferase CDI07_00020 PF16363 GDP-mannose 4,6 dehydratase CDI07_00065 PF00118 TCP-1/cpn60 chaperonin family CDI07_00090 PF00571 CBS domain CDI07_00090 PF00478 IMP dehydrogenase / GMP reductase domain CDI07_00095 PF00890 FAD binding domain CDI07_00095 PF02910 Fumarate reductase flavoprotein C-term CDI07_00105 PF02445 Quinolinate synthetase A protein CDI07_00110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDI07_00110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDI07_00115 PF00384 Molybdopterin oxidoreductase CDI07_00115 PF01568 Molydopterin dinucleotide binding domain CDI07_00115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDI07_00120 PF00156 Phosphoribosyl transferase domain CDI07_00125 PF01259 SAICAR synthetase CDI07_00130 PF00586 AIR synthase related protein, N-terminal domain CDI07_00130 PF02769 AIR synthase related protein, C-terminal domain CDI07_00135 PF02222 ATP-grasp domain CDI07_00140 PF00731 AIR carboxylase CDI07_00145 PF02844 Phosphoribosylglycinamide synthetase, N domain CDI07_00145 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDI07_00145 PF02843 Phosphoribosylglycinamide synthetase, C domain CDI07_00165 PF11838 ERAP1-like C-terminal domain CDI07_00165 PF01433 Peptidase family M1 domain CDI07_00170 PF02769 AIR synthase related protein, C-terminal domain CDI07_00170 PF00586 AIR synthase related protein, N-terminal domain CDI07_00170 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDI07_00180 PF00117 Glutamine amidotransferase class-I CDI07_00180 PF02568 Thiamine biosynthesis protein (ThiI) CDI07_00180 PF00958 GMP synthase C terminal domain CDI07_00185 PF00117 Glutamine amidotransferase class-I CDI07_00185 PF02540 NAD synthase CDI07_00185 PF00958 GMP synthase C terminal domain CDI07_00250 PF17827 PrmC N-terminal domain CDI07_00250 PF05175 Methyltransferase small domain CDI07_00275 PF00575 S1 RNA binding domain CDI07_00280 PF00719 Inorganic pyrophosphatase CDI07_00335 PF00795 Carbon-nitrogen hydrolase CDI07_00335 PF00535 Glycosyl transferase family 2 CDI07_00345 PF06745 KaiC CDI07_00355 PF02225 PA domain CDI07_00355 PF04389 Peptidase family M28 CDI07_00370 PF00795 Carbon-nitrogen hydrolase CDI07_00410 PF01906 Putative heavy-metal-binding CDI07_00450 PF01029 NusB family CDI07_00450 PF01189 16S rRNA methyltransferase RsmB/F CDI07_00455 PF00924 Mechanosensitive ion channel CDI07_00500 PF00009 Elongation factor Tu GTP binding domain CDI07_00500 PF03144 Elongation factor Tu domain 2 CDI07_00500 PF09105 Elongation factor SelB, winged helix CDI07_00500 PF09106 Elongation factor SelB, winged helix CDI07_00500 PF09107 Elongation factor SelB, winged helix CDI07_00525 PF01926 50S ribosome-binding GTPase CDI07_00530 PF00717 Peptidase S24-like CDI07_00530 PF12802 MarR family CDI07_00535 PF00448 SRP54-type protein, GTPase domain CDI07_00535 PF02881 SRP54-type protein, helical bundle domain CDI07_00595 PF00860 Permease family CDI07_00600 PF08402 TOBE domain CDI07_00600 PF00005 ABC transporter CDI07_00605 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_00610 PF03576 Peptidase family S58 CDI07_00630 PF01910 Thiamine-binding protein CDI07_00635 PF01871 AMMECR1 CDI07_00645 PF01029 NusB family CDI07_00645 PF01189 16S rRNA methyltransferase RsmB/F CDI07_00650 PF00136 DNA polymerase family B CDI07_00650 PF03104 DNA polymerase family B, exonuclease domain CDI07_00690 PF00013 KH domain CDI07_00690 PF01138 3' exoribonuclease family, domain 1 CDI07_00690 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDI07_00690 PF00575 S1 RNA binding domain CDI07_00690 PF03725 3' exoribonuclease family, domain 2 CDI07_00710 PF03551 Transcriptional regulator PadR-like family CDI07_00715 PF03061 Thioesterase superfamily CDI07_00715 PF01008 Initiation factor 2 subunit family CDI07_00725 PF00857 Isochorismatase family CDI07_00730 PF01594 AI-2E family transporter CDI07_00775 PF01230 HIT domain CDI07_00800 PF03725 3' exoribonuclease family, domain 2 CDI07_00800 PF01138 3' exoribonuclease family, domain 1 CDI07_00800 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDI07_00800 PF00013 KH domain CDI07_00800 PF00575 S1 RNA binding domain CDI07_00805 PF03725 3' exoribonuclease family, domain 2 CDI07_00805 PF01138 3' exoribonuclease family, domain 1 CDI07_00830 PF03447 Homoserine dehydrogenase, NAD binding domain CDI07_00830 PF00742 Homoserine dehydrogenase CDI07_00830 PF01842 ACT domain CDI07_00835 PF01380 SIS domain CDI07_00835 PF00571 CBS domain CDI07_00840 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CDI07_00845 PF00364 Biotin-requiring enzyme CDI07_00845 PF00682 HMGL-like CDI07_00845 PF02436 Conserved carboxylase domain CDI07_00855 PF01039 Carboxyl transferase domain CDI07_00890 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain CDI07_00890 PF01137 RNA 3'-terminal phosphate cyclase CDI07_00920 PF00374 Nickel-dependent hydrogenase CDI07_00930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDI07_00945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDI07_00945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDI07_00945 PF00037 4Fe-4S binding domain CDI07_00950 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDI07_00950 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDI07_00950 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_00955 PF00266 Aminotransferase class-V CDI07_00960 PF00152 tRNA synthetases class II (D, K and N) CDI07_00960 PF01336 OB-fold nucleic acid binding domain CDI07_00975 PF00266 Aminotransferase class-V CDI07_01000 PF00297 Ribosomal protein L3 CDI07_01005 PF00573 Ribosomal protein L4/L1 family CDI07_01010 PF00276 Ribosomal protein L23 CDI07_01015 PF03947 Ribosomal Proteins L2, C-terminal domain CDI07_01015 PF00181 Ribosomal Proteins L2, RNA binding domain CDI07_01020 PF00203 Ribosomal protein S19 CDI07_01025 PF00237 Ribosomal protein L22p/L17e CDI07_01030 PF07650 KH domain CDI07_01030 PF00189 Ribosomal protein S3, C-terminal domain CDI07_01035 PF00831 Ribosomal L29 protein CDI07_01040 PF01253 Translation initiation factor SUI1 CDI07_01050 PF00366 Ribosomal protein S17 CDI07_01055 PF00238 Ribosomal protein L14p/L23e CDI07_01060 PF00467 KOW motif CDI07_01060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDI07_01070 PF00281 Ribosomal protein L5 CDI07_01070 PF00673 ribosomal L5P family C-terminus CDI07_01080 PF00410 Ribosomal protein S8 CDI07_01085 PF00347 Ribosomal protein L6 CDI07_01100 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDI07_01105 PF03719 Ribosomal protein S5, C-terminal domain CDI07_01105 PF00333 Ribosomal protein S5, N-terminal domain CDI07_01110 PF00327 Ribosomal protein L30p/L7e CDI07_01115 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDI07_01150 PF00106 short chain dehydrogenase CDI07_01155 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDI07_01155 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDI07_01165 PF08468 Methyltransferase small domain N-terminal CDI07_01165 PF05175 Methyltransferase small domain CDI07_01175 PF00416 Ribosomal protein S13/S18 CDI07_01180 PF00163 Ribosomal protein S4/S9 N-terminal domain CDI07_01180 PF01479 S4 domain CDI07_01185 PF00411 Ribosomal protein S11 CDI07_01190 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDI07_01190 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDI07_01190 PF01000 RNA polymerase Rpb3/RpoA insert domain CDI07_01205 PF00572 Ribosomal protein L13 CDI07_01210 PF00380 Ribosomal protein S9/S16 CDI07_01230 PF00113 Enolase, C-terminal TIM barrel domain CDI07_01230 PF03952 Enolase, N-terminal domain CDI07_01235 PF00318 Ribosomal protein S2 CDI07_01275 PF01037 Lrp/AsnC ligand binding domain CDI07_01285 PF00156 Phosphoribosyl transferase domain CDI07_01300 PF02881 SRP54-type protein, helical bundle domain CDI07_01300 PF00448 SRP54-type protein, GTPase domain CDI07_01300 PF02978 Signal peptide binding domain CDI07_01320 PF01048 Phosphorylase superfamily CDI07_01325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDI07_01325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_01340 PF01048 Phosphorylase superfamily CDI07_01345 PF00291 Pyridoxal-phosphate dependent enzyme CDI07_01350 PF01875 Memo-like protein CDI07_01355 PF10509 Galactokinase galactose-binding signature CDI07_01355 PF00288 GHMP kinases N terminal domain CDI07_01355 PF08544 GHMP kinases C terminal CDI07_01370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_01370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDI07_01375 PF12801 4Fe-4S binding domain CDI07_01380 PF13247 4Fe-4S dicluster domain CDI07_01385 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CDI07_01385 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CDI07_01390 PF01070 FMN-dependent dehydrogenase CDI07_01400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDI07_01400 PF12706 Beta-lactamase superfamily domain CDI07_01400 PF17770 Ribonuclease J C-terminal domain CDI07_01405 PF00348 Polyprenyl synthetase CDI07_01410 PF07690 Major Facilitator Superfamily CDI07_01430 PF07969 Amidohydrolase family CDI07_01435 PF01321 Creatinase/Prolidase N-terminal domain CDI07_01435 PF00557 Metallopeptidase family M24 CDI07_01470 PF08753 NikR C terminal nickel binding domain CDI07_01470 PF01402 Ribbon-helix-helix protein, copG family CDI07_01485 PF09210 Domain of unknown function (DUF1957) CDI07_01485 PF03065 Glycosyl hydrolase family 57 CDI07_01490 PF00543 Nitrogen regulatory protein P-II CDI07_01500 PF00209 Sodium:neurotransmitter symporter family CDI07_01505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDI07_01505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDI07_01520 PF00227 Proteasome subunit CDI07_01525 PF10996 Beta-Casp domain CDI07_01525 PF00753 Metallo-beta-lactamase superfamily CDI07_01525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDI07_01530 PF00291 Pyridoxal-phosphate dependent enzyme CDI07_01540 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CDI07_01555 PF01554 MatE CDI07_01560 PF01554 MatE CDI07_01565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDI07_01565 PF02896 PEP-utilising enzyme, TIM barrel domain CDI07_01565 PF00391 PEP-utilising enzyme, mobile domain CDI07_01585 PF13860 FlgD Ig-like domain CDI07_01585 PF05922 Peptidase inhibitor I9 CDI07_01585 PF00082 Subtilase family CDI07_01585 PF02225 PA domain CDI07_01585 PF00082 Subtilase family CDI07_01585 PF13860 FlgD Ig-like domain CDI07_01585 PF02225 PA domain CDI07_01585 PF05922 Peptidase inhibitor I9 CDI07_01600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDI07_01600 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_01615 PF01018 GTP1/OBG CDI07_01615 PF01926 50S ribosome-binding GTPase CDI07_01615 PF04055 Radical SAM superfamily CDI07_01635 PF00266 Aminotransferase class-V CDI07_01645 PF00586 AIR synthase related protein, N-terminal domain CDI07_01645 PF02769 AIR synthase related protein, C-terminal domain CDI07_01650 PF07503 HypF finger CDI07_01650 PF00708 Acylphosphatase CDI07_01650 PF01300 Telomere recombination CDI07_01650 PF17788 HypF Kae1-like domain CDI07_01655 PF01924 Hydrogenase formation hypA family CDI07_01660 PF01455 HupF/HypC family CDI07_01665 PF12804 MobA-like NTP transferase domain CDI07_01680 PF10609 NUBPL iron-transfer P-loop NTPase CDI07_01720 PF01032 FecCD transport family CDI07_01725 PF00005 ABC transporter CDI07_01735 PF05547 Immune inhibitor A peptidase M6 CDI07_01735 PF00801 PKD domain CDI07_01740 PF00753 Metallo-beta-lactamase superfamily CDI07_01740 PF12706 Beta-lactamase superfamily domain CDI07_01760 PF06560 Glucose-6-phosphate isomerase (GPI) CDI07_01780 PF01050 Mannose-6-phosphate isomerase CDI07_01780 PF00483 Nucleotidyl transferase CDI07_01790 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDI07_01790 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDI07_01790 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDI07_01790 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDI07_01805 PF00005 ABC transporter CDI07_01820 PF01891 Cobalt uptake substrate-specific transmembrane region CDI07_01820 PF13190 PDGLE domain CDI07_01835 PF00013 KH domain CDI07_01835 PF03725 3' exoribonuclease family, domain 2 CDI07_01835 PF01138 3' exoribonuclease family, domain 1 CDI07_01835 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDI07_01835 PF00575 S1 RNA binding domain CDI07_01870 PF00155 Aminotransferase class I and II CDI07_01900 PF00732 GMC oxidoreductase CDI07_01900 PF05199 GMC oxidoreductase CDI07_01905 PF00177 Ribosomal protein S7p/S5e CDI07_01925 PF05000 RNA polymerase Rpb1, domain 4 CDI07_01925 PF04998 RNA polymerase Rpb1, domain 5 CDI07_01925 PF00623 RNA polymerase Rpb1, domain 2 CDI07_01925 PF04997 RNA polymerase Rpb1, domain 1 CDI07_01925 PF04983 RNA polymerase Rpb1, domain 3 CDI07_01930 PF04997 RNA polymerase Rpb1, domain 1 CDI07_01930 PF00623 RNA polymerase Rpb1, domain 2 CDI07_01930 PF04983 RNA polymerase Rpb1, domain 3 CDI07_01930 PF04998 RNA polymerase Rpb1, domain 5 CDI07_01930 PF05000 RNA polymerase Rpb1, domain 4 CDI07_01935 PF04561 RNA polymerase Rpb2, domain 2 CDI07_01935 PF00562 RNA polymerase Rpb2, domain 6 CDI07_01935 PF04560 RNA polymerase Rpb2, domain 7 CDI07_01935 PF04563 RNA polymerase beta subunit CDI07_01935 PF04565 RNA polymerase Rpb2, domain 3 CDI07_01935 PF10385 RNA polymerase beta subunit external 1 domain CDI07_01965 PF02347 Glycine cleavage system P-protein CDI07_01970 PF02347 Glycine cleavage system P-protein CDI07_02020 PF03009 Glycerophosphoryl diester phosphodiesterase family CDI07_02025 PF03009 Glycerophosphoryl diester phosphodiesterase family CDI07_02030 PF07690 Major Facilitator Superfamily CDI07_02035 PF00083 Sugar (and other) transporter CDI07_02050 PF00005 ABC transporter CDI07_02055 PF02223 Thymidylate kinase CDI07_02065 PF00483 Nucleotidyl transferase CDI07_02075 PF11897 Protein of unknown function (DUF3417) CDI07_02075 PF00343 Carbohydrate phosphorylase CDI07_02080 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDI07_02080 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDI07_02105 PF00692 dUTPase CDI07_02130 PF00687 Ribosomal protein L1p/L10e family CDI07_02135 PF03946 Ribosomal protein L11, N-terminal domain CDI07_02135 PF00298 Ribosomal protein L11, RNA binding domain CDI07_02150 PF00091 Tubulin/FtsZ family, GTPase domain CDI07_02150 PF12327 FtsZ family, C-terminal domain CDI07_02160 PF16868 NMT1-like family CDI07_02195 PF01751 Toprim domain CDI07_02195 PF01131 DNA topoisomerase CDI07_02195 PF01396 Topoisomerase DNA binding C4 zinc finger CDI07_02200 PF01494 FAD binding domain CDI07_02215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_02215 PF13192 Thioredoxin domain CDI07_02225 PF09827 CRISPR associated protein Cas2 CDI07_02235 PF01867 CRISPR associated protein Cas1 CDI07_02280 PF13607 Succinyl-CoA ligase like flavodoxin domain CDI07_02280 PF13380 CoA binding domain CDI07_02280 PF00583 Acetyltransferase (GNAT) family CDI07_02300 PF01751 Toprim domain CDI07_02300 PF17915 Reverse gyrase zinc finger CDI07_02300 PF01131 DNA topoisomerase CDI07_02300 PF00270 DEAD/DEAH box helicase CDI07_02325 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDI07_02335 PF13419 Haloacid dehalogenase-like hydrolase CDI07_02350 PF01966 HD domain CDI07_02360 PF00152 tRNA synthetases class II (D, K and N) CDI07_02360 PF01336 OB-fold nucleic acid binding domain CDI07_02375 PF01142 tRNA pseudouridine synthase D (TruD) CDI07_02380 PF13419 Haloacid dehalogenase-like hydrolase CDI07_02420 PF00117 Glutamine amidotransferase class-I CDI07_02420 PF06418 CTP synthase N-terminus CDI07_02435 PF01018 GTP1/OBG CDI07_02435 PF09269 Domain of unknown function (DUF1967) CDI07_02435 PF01926 50S ribosome-binding GTPase CDI07_02440 PF12706 Beta-lactamase superfamily domain CDI07_02450 PF00483 Nucleotidyl transferase CDI07_02460 PF00571 CBS domain CDI07_02460 PF00478 IMP dehydrogenase / GMP reductase domain CDI07_02470 PF00557 Metallopeptidase family M24 CDI07_02475 PF02386 Cation transport protein CDI07_02480 PF00005 ABC transporter CDI07_02515 PF00132 Bacterial transferase hexapeptide (six repeats) CDI07_02520 PF01255 Putative undecaprenyl diphosphate synthase CDI07_02535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDI07_02535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDI07_02535 PF03129 Anticodon binding domain CDI07_02580 PF01594 AI-2E family transporter CDI07_02585 PF00809 Pterin binding enzyme CDI07_02605 PF00005 ABC transporter CDI07_02610 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CDI07_02615 PF00271 Helicase conserved C-terminal domain CDI07_02615 PF17757 UvrB interaction domain CDI07_02615 PF12344 Ultra-violet resistance protein B CDI07_02615 PF02151 UvrB/uvrC motif CDI07_02615 PF04851 Type III restriction enzyme, res subunit CDI07_02620 PF01416 tRNA pseudouridine synthase CDI07_02625 PF03484 tRNA synthetase B5 domain CDI07_02625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDI07_02630 PF01409 tRNA synthetases class II core domain (F) CDI07_02635 PF08240 Alcohol dehydrogenase GroES-like domain CDI07_02635 PF00107 Zinc-binding dehydrogenase CDI07_02640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDI07_02660 PF02637 GatB domain CDI07_02660 PF02934 GatB/GatE catalytic domain CDI07_02665 PF00710 Asparaginase, N-terminal CDI07_02665 PF17763 Glutaminase/Asparaginase C-terminal domain CDI07_02695 PF00398 Ribosomal RNA adenine dimethylase CDI07_02730 PF01522 Polysaccharide deacetylase CDI07_02735 PF00534 Glycosyl transferases group 1 CDI07_02745 PF02769 AIR synthase related protein, C-terminal domain CDI07_02745 PF00586 AIR synthase related protein, N-terminal domain CDI07_02750 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CDI07_02750 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CDI07_02760 PF00654 Voltage gated chloride channel CDI07_02770 PF00999 Sodium/hydrogen exchanger family CDI07_02780 PF00999 Sodium/hydrogen exchanger family CDI07_02790 PF00491 Arginase family CDI07_02810 PF16653 Saccharopine dehydrogenase C-terminal domain CDI07_02810 PF03435 Saccharopine dehydrogenase NADP binding domain CDI07_02825 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDI07_02825 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CDI07_02825 PF01189 16S rRNA methyltransferase RsmB/F CDI07_02830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDI07_02830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDI07_02845 PF02511 Thymidylate synthase complementing protein CDI07_02855 PF01230 HIT domain CDI07_02860 PF01676 Metalloenzyme superfamily CDI07_02860 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CDI07_02865 PF00248 Aldo/keto reductase family CDI07_02875 PF00133 tRNA synthetases class I (I, L, M and V) CDI07_02875 PF09334 tRNA synthetases class I (M) CDI07_02875 PF01588 Putative tRNA binding domain CDI07_02890 PF02272 DHHA1 domain CDI07_02890 PF01368 DHH family CDI07_02940 PF01022 Bacterial regulatory protein, arsR family CDI07_02945 PF04055 Radical SAM superfamily CDI07_02965 PF00004 ATPase family associated with various cellular activities (AAA) CDI07_02965 PF17862 AAA+ lid domain CDI07_02965 PF01434 Peptidase family M41 CDI07_03005 PF01161 Phosphatidylethanolamine-binding protein CDI07_03050 PF01321 Creatinase/Prolidase N-terminal domain CDI07_03050 PF00557 Metallopeptidase family M24 CDI07_03055 PF01037 Lrp/AsnC ligand binding domain CDI07_03060 PF00202 Aminotransferase class-III CDI07_03065 PF00860 Permease family CDI07_03085 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDI07_03090 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDI07_03095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDI07_03105 PF00361 Proton-conducting membrane transporter CDI07_03110 PF00361 Proton-conducting membrane transporter CDI07_03115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDI07_03120 PF00361 Proton-conducting membrane transporter CDI07_03120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CDI07_03120 PF13244 Domain of unknown function (DUF4040) CDI07_03120 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CDI07_03130 PF03334 Na+/H+ antiporter subunit CDI07_03135 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDI07_03140 PF01899 Na+/H+ ion antiporter subunit CDI07_03150 PF06463 Molybdenum Cofactor Synthesis C CDI07_03150 PF04055 Radical SAM superfamily CDI07_03160 PF02350 UDP-N-acetylglucosamine 2-epimerase CDI07_03165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDI07_03165 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDI07_03165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDI07_03185 PF03485 Arginyl tRNA synthetase N terminal domain CDI07_03185 PF05746 DALR anticodon binding domain CDI07_03185 PF00750 tRNA synthetases class I (R) CDI07_03195 PF00701 Dihydrodipicolinate synthetase family CDI07_03285 PF02568 Thiamine biosynthesis protein (ThiI) CDI07_03285 PF02926 THUMP domain CDI07_03290 PF01940 Integral membrane protein DUF92 CDI07_03295 PF01037 Lrp/AsnC ligand binding domain CDI07_03295 PF13404 AsnC-type helix-turn-helix domain CDI07_03305 PF01022 Bacterial regulatory protein, arsR family CDI07_03315 PF01042 Endoribonuclease L-PSP CDI07_03325 PF00004 ATPase family associated with various cellular activities (AAA) CDI07_03325 PF05362 Lon protease (S16) C-terminal proteolytic domain CDI07_03325 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDI07_03330 PF00005 ABC transporter CDI07_03335 PF01458 Uncharacterized protein family (UPF0051) CDI07_03355 PF00374 Nickel-dependent hydrogenase CDI07_03360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDI07_03365 PF00970 Oxidoreductase FAD-binding domain CDI07_03365 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDI07_03365 PF00175 Oxidoreductase NAD-binding domain CDI07_03380 PF00005 ABC transporter CDI07_03390 PF01497 Periplasmic binding protein CDI07_03430 PF02254 TrkA-N domain CDI07_03430 PF02080 TrkA-C domain CDI07_03450 PF04493 Endonuclease V CDI07_03460 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) CDI07_03470 PF01202 Shikimate kinase CDI07_03475 PF01435 Peptidase family M48 CDI07_03485 PF00155 Aminotransferase class I and II CDI07_03490 PF16861 Carbamoyltransferase C-terminus CDI07_03490 PF02543 Carbamoyltransferase N-terminus CDI07_03500 PF09180 Prolyl-tRNA synthetase, C-terminal CDI07_03500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDI07_03500 PF03129 Anticodon binding domain CDI07_03505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDI07_03505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDI07_03515 PF01925 Sulfite exporter TauE/SafE CDI07_03520 PF01925 Sulfite exporter TauE/SafE CDI07_03550 PF01588 Putative tRNA binding domain CDI07_03550 PF09334 tRNA synthetases class I (M) CDI07_03550 PF08264 Anticodon-binding domain of tRNA CDI07_03570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDI07_03575 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDI07_03575 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDI07_03575 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDI07_03585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDI07_03590 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDI07_03590 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDI07_03590 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDI07_03605 PF01975 Survival protein SurE CDI07_03610 PF02881 SRP54-type protein, helical bundle domain CDI07_03610 PF00448 SRP54-type protein, GTPase domain CDI07_03620 PF02608 ABC transporter substrate-binding protein PnrA-like CDI07_03655 PF09190 DALR domain CDI07_03655 PF01406 tRNA synthetases class I (C) catalytic domain CDI07_03660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDI07_03675 PF09383 NIL domain CDI07_03675 PF00005 ABC transporter CDI07_03680 PF00326 Prolyl oligopeptidase family CDI07_03680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CDI07_03685 PF06745 KaiC CDI07_03690 PF00270 DEAD/DEAH box helicase CDI07_03690 PF00271 Helicase conserved C-terminal domain CDI07_03690 PF08494 DEAD/H associated CDI07_03700 PF00535 Glycosyl transferase family 2 CDI07_03705 PF01384 Phosphate transporter family CDI07_03710 PF01702 Queuine tRNA-ribosyltransferase CDI07_03735 PF13419 Haloacid dehalogenase-like hydrolase CDI07_03780 PF05343 M42 glutamyl aminopeptidase CDI07_03795 PF03176 MMPL family CDI07_03820 PF07690 Major Facilitator Superfamily CDI07_03830 PF01923 Cobalamin adenosyltransferase CDI07_03840 PF01008 Initiation factor 2 subunit family CDI07_03845 PF18146 Damage-inducible protein CinA KH domain CDI07_03845 PF02464 Competence-damaged protein CDI07_03845 PF00994 Probable molybdopterin binding domain CDI07_03850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDI07_03850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDI07_03855 PF02567 Phenazine biosynthesis-like protein CDI07_03860 PF02594 Uncharacterised ACR, YggU family COG1872 CDI07_03870 PF03129 Anticodon binding domain CDI07_03870 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDI07_03875 PF16657 Maltogenic Amylase, C-terminal domain CDI07_03875 PF00128 Alpha amylase, catalytic domain CDI07_03875 PF02903 Alpha amylase, N-terminal ig-like domain CDI07_03890 PF01554 MatE CDI07_03900 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase CDI07_03915 PF00557 Metallopeptidase family M24 CDI07_03915 PF01321 Creatinase/Prolidase N-terminal domain CDI07_03940 PF06508 Queuosine biosynthesis protein QueC CDI07_03955 PF02421 Ferrous iron transport protein B CDI07_03955 PF17910 FeoB cytosolic helical domain CDI07_03955 PF07664 Ferrous iron transport protein B C terminus CDI07_03955 PF04023 FeoA domain CDI07_03955 PF07670 Nucleoside recognition CDI07_03965 PF00483 Nucleotidyl transferase CDI07_03980 PF02441 Flavoprotein CDI07_03995 PF01926 50S ribosome-binding GTPase CDI07_03995 PF06071 Protein of unknown function (DUF933) CDI07_04000 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDI07_04000 PF00753 Metallo-beta-lactamase superfamily CDI07_04005 PF01544 CorA-like Mg2+ transporter protein CDI07_04010 PF01177 Asp/Glu/Hydantoin racemase CDI07_04020 PF01523 Putative modulator of DNA gyrase CDI07_04050 PF08264 Anticodon-binding domain of tRNA CDI07_04050 PF00133 tRNA synthetases class I (I, L, M and V) CDI07_04050 PF10458 Valyl tRNA synthetase tRNA binding arm CDI07_04055 PF13649 Methyltransferase domain CDI07_04060 PF00155 Aminotransferase class I and II CDI07_04065 PF03186 CobD/Cbib protein CDI07_04085 PF02654 Cobalamin-5-phosphate synthase CDI07_04090 PF12804 MobA-like NTP transferase domain CDI07_04100 PF02277 Phosphoribosyltransferase CDI07_04110 PF00994 Probable molybdopterin binding domain CDI07_04115 PF00994 Probable molybdopterin binding domain CDI07_04115 PF03454 MoeA C-terminal region (domain IV) CDI07_04115 PF03453 MoeA N-terminal region (domain I and II) CDI07_04140 PF01966 HD domain CDI07_04150 PF13302 Acetyltransferase (GNAT) domain CDI07_04180 PF01916 Deoxyhypusine synthase CDI07_04190 PF00857 Isochorismatase family CDI07_04195 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_04200 PF04055 Radical SAM superfamily CDI07_04210 PF01979 Amidohydrolase family CDI07_04215 PF01435 Peptidase family M48 CDI07_04220 PF01435 Peptidase family M48 CDI07_04225 PF00118 TCP-1/cpn60 chaperonin family CDI07_04235 PF00069 Protein kinase domain CDI07_04240 PF00488 MutS domain V CDI07_04240 PF05190 MutS family domain IV CDI07_04240 PF05192 MutS domain III CDI07_04240 PF05188 MutS domain II CDI07_04240 PF01624 MutS domain I CDI07_04250 PF01967 MoaC family CDI07_04255 PF00005 ABC transporter CDI07_04270 PF01139 tRNA-splicing ligase RtcB CDI07_04280 PF01189 16S rRNA methyltransferase RsmB/F CDI07_04280 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDI07_04280 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CDI07_04290 PF02548 Ketopantoate hydroxymethyltransferase CDI07_04295 PF00535 Glycosyl transferase family 2 CDI07_04325 PF01205 Uncharacterized protein family UPF0029 CDI07_04325 PF09186 Domain of unknown function (DUF1949) CDI07_04330 PF00270 DEAD/DEAH box helicase CDI07_04330 PF00271 Helicase conserved C-terminal domain CDI07_04330 PF09369 Domain of unknown function (DUF1998) CDI07_04335 PF00005 ABC transporter CDI07_04365 PF02769 AIR synthase related protein, C-terminal domain CDI07_04365 PF00586 AIR synthase related protein, N-terminal domain CDI07_04420 PF01938 TRAM domain CDI07_04420 PF05958 tRNA (Uracil-5-)-methyltransferase CDI07_04425 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CDI07_04425 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CDI07_04435 PF00338 Ribosomal protein S10p/S20e CDI07_04440 PF03144 Elongation factor Tu domain 2 CDI07_04440 PF03143 Elongation factor Tu C-terminal domain CDI07_04440 PF00009 Elongation factor Tu GTP binding domain CDI07_04445 PF14492 Elongation Factor G, domain II CDI07_04445 PF00679 Elongation factor G C-terminus CDI07_04445 PF03764 Elongation factor G, domain IV CDI07_04445 PF03144 Elongation factor Tu domain 2 CDI07_04445 PF00009 Elongation factor Tu GTP binding domain CDI07_04455 PF01966 HD domain CDI07_04460 PF02649 Type I GTP cyclohydrolase folE2 CDI07_04485 PF00672 HAMP domain CDI07_04485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDI07_04485 PF00512 His Kinase A (phospho-acceptor) domain CDI07_04505 PF00005 ABC transporter CDI07_04515 PF01351 Ribonuclease HII CDI07_04535 PF01380 SIS domain CDI07_04555 PF01910 Thiamine-binding protein CDI07_04570 PF05191 Adenylate kinase, active site lid CDI07_04590 PF00224 Pyruvate kinase, barrel domain CDI07_04590 PF00391 PEP-utilising enzyme, mobile domain CDI07_04590 PF02887 Pyruvate kinase, alpha/beta domain CDI07_04595 PF00578 AhpC/TSA family CDI07_04640 PF00999 Sodium/hydrogen exchanger family CDI07_04645 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CDI07_04650 PF02641 Uncharacterized ACR, COG1993 CDI07_04655 PF02441 Flavoprotein CDI07_04655 PF04127 DNA / pantothenate metabolism flavoprotein CDI07_04660 PF00924 Mechanosensitive ion channel CDI07_04660 PF05552 Conserved TM helix CDI07_04665 PF10609 NUBPL iron-transfer P-loop NTPase CDI07_04665 PF01883 Iron-sulfur cluster assembly protein CDI07_04670 PF01177 Asp/Glu/Hydantoin racemase CDI07_04680 PF01523 Putative modulator of DNA gyrase CDI07_04685 PF01523 Putative modulator of DNA gyrase CDI07_04690 PF00690 Cation transporter/ATPase, N-terminus CDI07_04690 PF00689 Cation transporting ATPase, C-terminus CDI07_04695 PF07690 Major Facilitator Superfamily CDI07_04715 PF13419 Haloacid dehalogenase-like hydrolase CDI07_04725 PF02146 Sir2 family CDI07_04735 PF00464 Serine hydroxymethyltransferase CDI07_04765 PF01568 Molydopterin dinucleotide binding domain CDI07_04765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDI07_04765 PF00384 Molybdopterin oxidoreductase CDI07_04770 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDI07_04770 PF00578 AhpC/TSA family CDI07_04785 PF00005 ABC transporter CDI07_04825 PF13302 Acetyltransferase (GNAT) domain CDI07_04830 PF00403 Heavy-metal-associated domain CDI07_04835 PF01022 Bacterial regulatory protein, arsR family CDI07_04840 PF03600 Citrate transporter CDI07_04860 PF01458 Uncharacterized protein family (UPF0051) CDI07_04865 PF01458 Uncharacterized protein family (UPF0051) CDI07_04870 PF00005 ABC transporter CDI07_04875 PF00899 ThiF family CDI07_04880 PF00881 Nitroreductase family CDI07_04895 PF01625 Peptide methionine sulfoxide reductase CDI07_04895 PF01641 SelR domain CDI07_04905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDI07_04910 PF00578 AhpC/TSA family CDI07_04915 PF00210 Ferritin-like domain CDI07_04925 PF00753 Metallo-beta-lactamase superfamily CDI07_04925 PF00258 Flavodoxin CDI07_04925 PF00301 Rubredoxin CDI07_04935 PF18113 Rubredoxin binding C-terminal domain CDI07_04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_04940 PF02915 Rubrerythrin CDI07_04945 PF00301 Rubredoxin CDI07_04950 PF01880 Desulfoferrodoxin CDI07_04995 PF01475 Ferric uptake regulator family CDI07_05025 PF01634 ATP phosphoribosyltransferase CDI07_05030 PF00815 Histidinol dehydrogenase CDI07_05035 PF00475 Imidazoleglycerol-phosphate dehydratase CDI07_05040 PF00117 Glutamine amidotransferase class-I CDI07_05045 PF00977 Histidine biosynthesis protein CDI07_05050 PF00977 Histidine biosynthesis protein CDI07_05055 PF01502 Phosphoribosyl-AMP cyclohydrolase CDI07_05055 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CDI07_05060 PF00155 Aminotransferase class I and II CDI07_05070 PF00533 BRCA1 C Terminus (BRCT) domain CDI07_05070 PF03120 NAD-dependent DNA ligase OB-fold domain CDI07_05070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDI07_05070 PF01653 NAD-dependent DNA ligase adenylation domain CDI07_05070 PF12826 Helix-hairpin-helix motif CDI07_05080 PF01411 tRNA synthetases class II (A) CDI07_05080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDI07_05080 PF02272 DHHA1 domain CDI07_05090 PF00375 Sodium:dicarboxylate symporter family CDI07_05095 PF08279 HTH domain CDI07_05095 PF03099 Biotin/lipoate A/B protein ligase family CDI07_05095 PF02237 Biotin protein ligase C terminal domain CDI07_05100 PF01791 DeoC/LacD family aldolase CDI07_05105 PF02436 Conserved carboxylase domain CDI07_05105 PF00364 Biotin-requiring enzyme CDI07_05105 PF00682 HMGL-like CDI07_05110 PF13722 5TM C-terminal transporter carbon starvation CstA CDI07_05110 PF02554 Carbon starvation protein CstA CDI07_05120 PF02374 Anion-transporting ATPase CDI07_05120 PF17886 HSP20-like domain found in ArsA CDI07_05135 PF12146 Serine aminopeptidase, S33 CDI07_05145 PF00709 Adenylosuccinate synthetase CDI07_05150 PF01370 NAD dependent epimerase/dehydratase family CDI07_05175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDI07_05180 PF10609 NUBPL iron-transfer P-loop NTPase CDI07_05180 PF01883 Iron-sulfur cluster assembly protein CDI07_05205 PF01980 tRNA-methyltransferase O CDI07_05205 PF18389 TrmO C-terminal domain CDI07_05265 PF09828 Chromate resistance exported protein CDI07_05275 PF02001 Protein of unknown function DUF134 CDI07_05280 PF00206 Lyase CDI07_05280 PF10397 Adenylosuccinate lyase C-terminus CDI07_05305 PF01008 Initiation factor 2 subunit family CDI07_05315 PF00465 Iron-containing alcohol dehydrogenase CDI07_05320 PF07690 Major Facilitator Superfamily CDI07_05325 PF00270 DEAD/DEAH box helicase CDI07_05325 PF08494 DEAD/H associated CDI07_05325 PF00271 Helicase conserved C-terminal domain CDI07_05335 PF01546 Peptidase family M20/M25/M40 CDI07_05335 PF07687 Peptidase dimerisation domain CDI07_05340 PF00753 Metallo-beta-lactamase superfamily CDI07_05355 PF01026 TatD related DNase CDI07_05385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDI07_05385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDI07_05390 PF01938 TRAM domain CDI07_05390 PF05958 tRNA (Uracil-5-)-methyltransferase CDI07_05395 PF04760 Translation initiation factor IF-2, N-terminal region CDI07_05395 PF00009 Elongation factor Tu GTP binding domain CDI07_05395 PF11987 Translation-initiation factor 2 CDI07_05405 PF00334 Nucleoside diphosphate kinase CDI07_05445 PF01507 Phosphoadenosine phosphosulfate reductase family CDI07_05450 PF01145 SPFH domain / Band 7 family CDI07_05460 PF01979 Amidohydrolase family CDI07_05475 PF00437 Type II/IV secretion system protein CDI07_05480 PF18073 Rubredoxin metal binding domain CDI07_05520 PF00152 tRNA synthetases class II (D, K and N) CDI07_05520 PF01336 OB-fold nucleic acid binding domain CDI07_05545 PF01699 Sodium/calcium exchanger protein CDI07_05560 PF17176 tRNA-binding domain CDI07_05560 PF05127 Helicase CDI07_05560 PF13718 GNAT acetyltransferase 2 CDI07_05560 PF08351 Domain of unknown function (DUF1726) CDI07_05565 PF07676 WD40-like Beta Propeller Repeat CDI07_05565 PF00326 Prolyl oligopeptidase family CDI07_05580 PF14010 Phosphoenolpyruvate carboxylase CDI07_05595 PF02632 BioY family CDI07_05600 PF00005 ABC transporter CDI07_05605 PF02361 Cobalt transport protein CDI07_05630 PF13404 AsnC-type helix-turn-helix domain CDI07_05630 PF01037 Lrp/AsnC ligand binding domain CDI07_05650 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_05655 PF08402 TOBE domain CDI07_05655 PF00005 ABC transporter CDI07_05680 PF00162 Phosphoglycerate kinase CDI07_05705 PF00005 ABC transporter CDI07_05705 PF13732 Domain of unknown function (DUF4162) CDI07_05720 PF10576 Iron-sulfur binding domain of endonuclease III CDI07_05720 PF00633 Helix-hairpin-helix motif CDI07_05720 PF00730 HhH-GPD superfamily base excision DNA repair protein CDI07_05755 PF13607 Succinyl-CoA ligase like flavodoxin domain CDI07_05755 PF13380 CoA binding domain CDI07_05755 PF00583 Acetyltransferase (GNAT) family CDI07_05780 PF00291 Pyridoxal-phosphate dependent enzyme CDI07_05790 PF02926 THUMP domain CDI07_05790 PF02568 Thiamine biosynthesis protein (ThiI) CDI07_05810 PF02568 Thiamine biosynthesis protein (ThiI) CDI07_05810 PF02926 THUMP domain CDI07_05825 PF17645 Arylmalonate decarboxylase CDI07_05835 PF02899 Phage integrase, N-terminal SAM-like domain CDI07_05835 PF00589 Phage integrase family CDI07_05850 PF03749 Sugar fermentation stimulation protein RE domain CDI07_05850 PF17746 SfsA N-terminal OB domain CDI07_05885 PF00270 DEAD/DEAH box helicase CDI07_05885 PF00271 Helicase conserved C-terminal domain CDI07_05905 PF01694 Rhomboid family CDI07_05910 PF00459 Inositol monophosphatase family CDI07_05920 PF00465 Iron-containing alcohol dehydrogenase CDI07_05930 PF02626 Carboxyltransferase domain, subdomain A and B CDI07_05935 PF02682 Carboxyltransferase domain, subdomain C and D CDI07_05940 PF03746 LamB/YcsF family CDI07_05975 PF01145 SPFH domain / Band 7 family CDI07_05975 PF16200 C-terminal region of band_7 CDI07_05980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDI07_05995 PF00591 Glycosyl transferase family, a/b domain CDI07_05995 PF02885 Glycosyl transferase family, helical bundle domain CDI07_05995 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CDI07_06010 PF01884 PcrB family CDI07_06025 PF03120 NAD-dependent DNA ligase OB-fold domain CDI07_06025 PF00533 BRCA1 C Terminus (BRCT) domain CDI07_06025 PF12826 Helix-hairpin-helix motif CDI07_06025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDI07_06025 PF01653 NAD-dependent DNA ligase adenylation domain CDI07_06040 PF06470 SMC proteins Flexible Hinge Domain CDI07_06040 PF02463 RecF/RecN/SMC N terminal domain CDI07_06060 PF02310 B12 binding domain CDI07_06060 PF01642 Methylmalonyl-CoA mutase CDI07_06070 PF02545 Maf-like protein CDI07_06100 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDI07_06110 PF13537 Glutamine amidotransferase domain CDI07_06110 PF00733 Asparagine synthase CDI07_06120 PF13439 Glycosyltransferase Family 4 CDI07_06120 PF00534 Glycosyl transferases group 1 CDI07_06125 PF01300 Telomere recombination CDI07_06125 PF03481 Putative GTP-binding controlling metal-binding CDI07_06145 PF02403 Seryl-tRNA synthetase N-terminal domain CDI07_06145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDI07_06155 PF03454 MoeA C-terminal region (domain IV) CDI07_06155 PF00994 Probable molybdopterin binding domain CDI07_06155 PF03453 MoeA N-terminal region (domain I and II) CDI07_06165 PF17862 AAA+ lid domain CDI07_06165 PF06480 FtsH Extracellular CDI07_06165 PF00004 ATPase family associated with various cellular activities (AAA) CDI07_06165 PF01434 Peptidase family M41 CDI07_06185 PF13380 CoA binding domain CDI07_06185 PF13607 Succinyl-CoA ligase like flavodoxin domain CDI07_06185 PF00583 Acetyltransferase (GNAT) family CDI07_06265 PF00005 ABC transporter CDI07_06270 PF04679 ATP dependent DNA ligase C terminal region CDI07_06270 PF01068 ATP dependent DNA ligase domain CDI07_06270 PF04675 DNA ligase N terminus CDI07_06280 PF00011 Hsp20/alpha crystallin family CDI07_06285 PF06480 FtsH Extracellular CDI07_06285 PF17862 AAA+ lid domain CDI07_06285 PF00004 ATPase family associated with various cellular activities (AAA) CDI07_06285 PF01434 Peptidase family M41 CDI07_06320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDI07_06330 PF12911 N-terminal TM domain of oligopeptide transport permease C CDI07_06330 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_06335 PF00005 ABC transporter CDI07_06340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_06340 PF00005 ABC transporter CDI07_06350 PF12706 Beta-lactamase superfamily domain CDI07_06355 PF00881 Nitroreductase family CDI07_06365 PF01588 Putative tRNA binding domain CDI07_06365 PF09334 tRNA synthetases class I (M) CDI07_06365 PF08264 Anticodon-binding domain of tRNA CDI07_06405 PF13302 Acetyltransferase (GNAT) domain CDI07_06440 PF00583 Acetyltransferase (GNAT) family CDI07_06460 PF01467 Cytidylyltransferase-like CDI07_06460 PF00293 NUDIX domain CDI07_06485 PF13419 Haloacid dehalogenase-like hydrolase CDI07_06545 PF04199 Putative cyclase CDI07_06550 PF05221 S-adenosyl-L-homocysteine hydrolase CDI07_06550 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDI07_06555 PF01980 tRNA-methyltransferase O CDI07_06555 PF18389 TrmO C-terminal domain CDI07_06560 PF00005 ABC transporter CDI07_06560 PF08402 TOBE domain CDI07_06565 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06585 PF01926 50S ribosome-binding GTPase CDI07_06585 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDI07_06590 PF01894 Uncharacterised protein family UPF0047 CDI07_06610 PF13380 CoA binding domain CDI07_06635 PF05161 MOFRL family CDI07_06635 PF13660 Domain of unknown function (DUF4147) CDI07_06645 PF17912 MalK OB fold domain CDI07_06645 PF00005 ABC transporter CDI07_06645 PF03459 TOBE domain CDI07_06655 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDI07_06665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDI07_06670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDI07_06670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDI07_06675 PF00535 Glycosyl transferase family 2 CDI07_06680 PF00294 pfkB family carbohydrate kinase CDI07_06690 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06695 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06700 PF01547 Bacterial extracellular solute-binding protein CDI07_06705 PF00534 Glycosyl transferases group 1 CDI07_06715 PF17912 MalK OB fold domain CDI07_06715 PF00005 ABC transporter CDI07_06715 PF03459 TOBE domain CDI07_06750 PF00265 Thymidine kinase CDI07_06755 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain CDI07_06755 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain CDI07_06785 PF00293 NUDIX domain CDI07_06785 PF13344 Haloacid dehalogenase-like hydrolase CDI07_06800 PF00005 ABC transporter CDI07_06820 PF00483 Nucleotidyl transferase CDI07_06820 PF01066 CDP-alcohol phosphatidyltransferase CDI07_06825 PF00005 ABC transporter CDI07_06825 PF08402 TOBE domain CDI07_06830 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDI07_06865 PF00294 pfkB family carbohydrate kinase CDI07_06865 PF01467 Cytidylyltransferase-like CDI07_06875 PF13614 AAA domain CDI07_06880 PF00091 Tubulin/FtsZ family, GTPase domain CDI07_06880 PF12327 FtsZ family, C-terminal domain CDI07_06885 PF08753 NikR C terminal nickel binding domain CDI07_06885 PF01402 Ribbon-helix-helix protein, copG family CDI07_06900 PF01169 Uncharacterized protein family UPF0016 CDI07_06925 PF01381 Helix-turn-helix CDI07_06930 PF00005 ABC transporter CDI07_06945 PF02535 ZIP Zinc transporter CDI07_06955 PF01541 GIY-YIG catalytic domain CDI07_06955 PF02151 UvrB/uvrC motif CDI07_06955 PF08459 UvrC Helix-hairpin-helix N-terminal CDI07_06965 PF00005 ABC transporter CDI07_06965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_06970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_06970 PF00005 ABC transporter CDI07_06980 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_06985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDI07_07005 PF08704 tRNA methyltransferase complex GCD14 subunit CDI07_07010 PF00970 Oxidoreductase FAD-binding domain CDI07_07010 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDI07_07010 PF00175 Oxidoreductase NAD-binding domain CDI07_07015 PF13247 4Fe-4S dicluster domain CDI07_07015 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDI07_07015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_07030 PF01597 Glycine cleavage H-protein CDI07_07035 PF01899 Na+/H+ ion antiporter subunit CDI07_07040 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDI07_07070 PF00361 Proton-conducting membrane transporter CDI07_07075 PF10369 Small subunit of acetolactate synthase CDI07_07090 PF17284 Spermidine synthase tetramerisation domain CDI07_07095 PF02633 Creatinine amidohydrolase CDI07_07125 PF00474 Sodium:solute symporter family CDI07_07145 PF00850 Histone deacetylase domain CDI07_07160 PF00696 Amino acid kinase family CDI07_07170 PF01593 Flavin containing amine oxidoreductase CDI07_07185 PF04324 BFD-like [2Fe-2S] binding domain CDI07_07185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_07190 PF01266 FAD dependent oxidoreductase CDI07_07195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDI07_07195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDI07_07200 PF01950 Fructose-1,6-bisphosphatase CDI07_07210 PF00892 EamA-like transporter family CDI07_07215 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDI07_07215 PF01571 Aminomethyltransferase folate-binding domain CDI07_07220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDI07_07225 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_07235 PF00005 ABC transporter CDI07_07235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_07240 PF00005 ABC transporter CDI07_07240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_07255 PF01177 Asp/Glu/Hydantoin racemase CDI07_07265 PF00881 Nitroreductase family CDI07_07285 PF01949 Protein of unknown function DUF99 CDI07_07295 PF00708 Acylphosphatase CDI07_07305 PF00294 pfkB family carbohydrate kinase CDI07_07330 PF10609 NUBPL iron-transfer P-loop NTPase CDI07_07330 PF01883 Iron-sulfur cluster assembly protein CDI07_07335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDI07_07340 PF13247 4Fe-4S dicluster domain CDI07_07340 PF12800 4Fe-4S binding domain CDI07_07345 PF03063 Prismane/CO dehydrogenase family CDI07_07355 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDI07_07355 PF13247 4Fe-4S dicluster domain CDI07_07355 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_07360 PF12800 4Fe-4S binding domain CDI07_07360 PF13247 4Fe-4S dicluster domain CDI07_07370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDI07_07375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDI07_07375 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDI07_07385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDI07_07390 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDI07_07390 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDI07_07405 PF01384 Phosphate transporter family CDI07_07420 PF01926 50S ribosome-binding GTPase CDI07_07420 PF13167 GTP-binding GTPase N-terminal CDI07_07420 PF16360 GTP-binding GTPase Middle Region CDI07_07450 PF00588 SpoU rRNA Methylase family CDI07_07455 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDI07_07455 PF02558 Ketopantoate reductase PanE/ApbA CDI07_07465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDI07_07465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDI07_07470 PF05683 Fumarase C-terminus CDI07_07470 PF05681 Fumarate hydratase (Fumerase) CDI07_07475 PF05681 Fumarate hydratase (Fumerase) CDI07_07475 PF05683 Fumarase C-terminus CDI07_07480 PF03949 Malic enzyme, NAD binding domain CDI07_07480 PF00390 Malic enzyme, N-terminal domain CDI07_07505 PF03600 Citrate transporter CDI07_07520 PF01047 MarR family CDI07_07525 PF01523 Putative modulator of DNA gyrase CDI07_07540 PF01523 Putative modulator of DNA gyrase CDI07_07550 PF02806 Alpha amylase, C-terminal all-beta domain CDI07_07550 PF01833 IPT/TIG domain CDI07_07550 PF00686 Starch binding domain CDI07_07550 PF00128 Alpha amylase, catalytic domain CDI07_07570 PF07726 ATPase family associated with various cellular activities (AAA) CDI07_07570 PF17863 AAA lid domain CDI07_07585 PF03437 BtpA family CDI07_07615 PF04307 LexA-binding, inner membrane-associated putative hydrolase CDI07_07625 PF01121 Dephospho-CoA kinase CDI07_07640 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CDI07_07640 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CDI07_07645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDI07_07645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDI07_07660 PF01894 Uncharacterised protein family UPF0047 CDI07_07685 PF01411 tRNA synthetases class II (A) CDI07_07685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDI07_07695 PF00291 Pyridoxal-phosphate dependent enzyme CDI07_07710 PF00005 ABC transporter CDI07_07715 PF01032 FecCD transport family CDI07_07730 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system CDI07_07730 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system CDI07_07740 PF01935 Helicase HerA, central domain CDI07_07740 PF09378 HAS barrel domain CDI07_07745 PF00583 Acetyltransferase (GNAT) family CDI07_07745 PF00814 Glycoprotease family CDI07_07760 PF00155 Aminotransferase class I and II CDI07_07770 PF12169 DNA polymerase III subunits gamma and tau domain III CDI07_07775 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDI07_07775 PF05491 RuvB C-terminal winged helix domain CDI07_07775 PF17864 RuvB AAA lid domain CDI07_07780 PF01934 Protein of unknown function DUF86 CDI07_07795 PF06463 Molybdenum Cofactor Synthesis C CDI07_07795 PF04055 Radical SAM superfamily CDI07_07810 PF06745 KaiC CDI07_07830 PF14572 Phosphoribosyl synthetase-associated domain CDI07_07830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDI07_07880 PF01921 tRNA synthetases class I (K) CDI07_07895 PF01895 PhoU domain CDI07_07900 PF01112 Asparaginase CDI07_07910 PF06968 Biotin and Thiamin Synthesis associated domain CDI07_07910 PF04055 Radical SAM superfamily CDI07_07925 PF07690 Major Facilitator Superfamily CDI07_07930 PF00004 ATPase family associated with various cellular activities (AAA) CDI07_07930 PF06480 FtsH Extracellular CDI07_07930 PF17862 AAA+ lid domain CDI07_07930 PF01434 Peptidase family M41 CDI07_07940 PF00953 Glycosyl transferase family 4 CDI07_07945 PF13419 Haloacid dehalogenase-like hydrolase CDI07_07955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDI07_07960 PF01435 Peptidase family M48 CDI07_08000 PF00970 Oxidoreductase FAD-binding domain CDI07_08000 PF00175 Oxidoreductase NAD-binding domain CDI07_08000 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDI07_08005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_08005 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDI07_08030 PF00440 Bacterial regulatory proteins, tetR family CDI07_08035 PF12724 Flavodoxin domain CDI07_08050 PF01883 Iron-sulfur cluster assembly protein CDI07_08060 PF01861 Branched-chain polyamine synthase A C-terminal domain CDI07_08070 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CDI07_08070 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CDI07_08075 PF04055 Radical SAM superfamily CDI07_08075 PF13186 Iron-sulfur cluster-binding domain CDI07_08090 PF06508 Queuosine biosynthesis protein QueC CDI07_08095 PF01180 Dihydroorotate dehydrogenase CDI07_08100 PF00291 Pyridoxal-phosphate dependent enzyme CDI07_08110 PF01571 Aminomethyltransferase folate-binding domain CDI07_08110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_08110 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDI07_08110 PF17806 Sarcosine oxidase A3 domain CDI07_08125 PF01266 FAD dependent oxidoreductase CDI07_08140 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_08140 PF18113 Rubredoxin binding C-terminal domain CDI07_08145 PF01040 UbiA prenyltransferase family CDI07_08155 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CDI07_08160 PF07690 Major Facilitator Superfamily CDI07_08170 PF00232 Glycosyl hydrolase family 1 CDI07_08175 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDI07_08175 PF02056 Family 4 glycosyl hydrolase CDI07_08185 PF07690 Major Facilitator Superfamily CDI07_08195 PF10509 Galactokinase galactose-binding signature CDI07_08195 PF00288 GHMP kinases N terminal domain CDI07_08195 PF08544 GHMP kinases C terminal CDI07_08205 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDI07_08205 PF01571 Aminomethyltransferase folate-binding domain CDI07_08205 PF01266 FAD dependent oxidoreductase CDI07_08205 PF16350 FAD dependent oxidoreductase central domain CDI07_08210 PF01571 Aminomethyltransferase folate-binding domain CDI07_08210 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDI07_08210 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_08210 PF17806 Sarcosine oxidase A3 domain CDI07_08215 PF00474 Sodium:solute symporter family CDI07_08235 PF09269 Domain of unknown function (DUF1967) CDI07_08235 PF01926 50S ribosome-binding GTPase CDI07_08235 PF01018 GTP1/OBG CDI07_08240 PF01037 Lrp/AsnC ligand binding domain CDI07_08245 PF01965 DJ-1/PfpI family CDI07_08280 PF01914 MarC family integral membrane protein CDI07_08285 PF02566 OsmC-like protein CDI07_08290 PF04055 Radical SAM superfamily CDI07_08295 PF07722 Peptidase C26 CDI07_08300 PF00155 Aminotransferase class I and II CDI07_08305 PF01008 Initiation factor 2 subunit family CDI07_08320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDI07_08320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDI07_08400 PF08241 Methyltransferase domain CDI07_08415 PF13404 AsnC-type helix-turn-helix domain CDI07_08415 PF01037 Lrp/AsnC ligand binding domain CDI07_08420 PF05958 tRNA (Uracil-5-)-methyltransferase CDI07_08430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDI07_08435 PF00156 Phosphoribosyl transferase domain CDI07_08445 PF04675 DNA ligase N terminus CDI07_08445 PF01068 ATP dependent DNA ligase domain CDI07_08445 PF04679 ATP dependent DNA ligase C terminal region CDI07_08455 PF03553 Na+/H+ antiporter family CDI07_08460 PF03167 Uracil DNA glycosylase superfamily CDI07_08470 PF06463 Molybdenum Cofactor Synthesis C CDI07_08470 PF04055 Radical SAM superfamily CDI07_08485 PF03788 LrgA family CDI07_08490 PF04172 LrgB-like family CDI07_08510 PF00596 Class II Aldolase and Adducin N-terminal domain CDI07_08520 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CDI07_08520 PF12557 Cob(I)alamin adenosyltransferase N terminal CDI07_08530 PF00176 SNF2 family N-terminal domain CDI07_08530 PF00271 Helicase conserved C-terminal domain CDI07_08555 PF03099 Biotin/lipoate A/B protein ligase family CDI07_08580 PF01555 DNA methylase CDI07_08585 PF07676 WD40-like Beta Propeller Repeat CDI07_08585 PF00326 Prolyl oligopeptidase family CDI07_08610 PF01384 Phosphate transporter family CDI07_08635 PF00919 Uncharacterized protein family UPF0004 CDI07_08635 PF01938 TRAM domain CDI07_08635 PF04055 Radical SAM superfamily CDI07_08645 PF05958 tRNA (Uracil-5-)-methyltransferase CDI07_08645 PF01938 TRAM domain CDI07_08645 PF02475 Met-10+ like-protein CDI07_08650 PF01899 Na+/H+ ion antiporter subunit CDI07_08655 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDI07_08660 PF03334 Na+/H+ antiporter subunit CDI07_08685 PF00361 Proton-conducting membrane transporter CDI07_08695 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDI07_08700 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDI07_08705 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDI07_08705 PF00374 Nickel-dependent hydrogenase CDI07_08710 PF00146 NADH dehydrogenase CDI07_08715 PF12838 4Fe-4S dicluster domain CDI07_08725 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CDI07_08745 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CDI07_08750 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CDI07_08755 PF00361 Proton-conducting membrane transporter CDI07_08765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CDI07_08770 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CDI07_08775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CDI07_08775 PF00374 Nickel-dependent hydrogenase CDI07_08780 PF00146 NADH dehydrogenase CDI07_08785 PF12838 4Fe-4S dicluster domain CDI07_08825 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_08835 PF00202 Aminotransferase class-III CDI07_08850 PF01791 DeoC/LacD family aldolase CDI07_08865 PF00113 Enolase, C-terminal TIM barrel domain CDI07_08865 PF03952 Enolase, N-terminal domain CDI07_08880 PF01037 Lrp/AsnC ligand binding domain CDI07_08880 PF13404 AsnC-type helix-turn-helix domain CDI07_08885 PF01725 Ham1 family CDI07_08905 PF02391 MoaE protein CDI07_08915 PF00899 ThiF family CDI07_08935 PF03176 MMPL family CDI07_08955 PF01189 16S rRNA methyltransferase RsmB/F CDI07_08955 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDI07_08955 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CDI07_08970 PF01513 ATP-NAD kinase CDI07_08980 PF00814 Glycoprotease family CDI07_09045 PF00027 Cyclic nucleotide-binding domain CDI07_09045 PF00520 Ion transport protein CDI07_09075 PF01048 Phosphorylase superfamily CDI07_09080 PF01979 Amidohydrolase family CDI07_09090 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDI07_09090 PF01661 Macro domain CDI07_09090 PF16193 AAA C-terminal domain CDI07_09090 PF12002 MgsA AAA+ ATPase C terminal CDI07_09100 PF03853 YjeF-related protein N-terminus CDI07_09100 PF01256 Carbohydrate kinase CDI07_09105 PF01022 Bacterial regulatory protein, arsR family CDI07_09115 PF01022 Bacterial regulatory protein, arsR family CDI07_09120 PF13607 Succinyl-CoA ligase like flavodoxin domain CDI07_09120 PF00583 Acetyltransferase (GNAT) family CDI07_09120 PF13380 CoA binding domain CDI07_09145 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDI07_09165 PF01170 Putative RNA methylase family UPF0020 CDI07_09165 PF02926 THUMP domain CDI07_09170 PF01926 50S ribosome-binding GTPase CDI07_09170 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDI07_09190 PF00437 Type II/IV secretion system protein CDI07_09205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDI07_09225 PF17863 AAA lid domain CDI07_09225 PF07726 ATPase family associated with various cellular activities (AAA) CDI07_09240 PF00294 pfkB family carbohydrate kinase CDI07_09245 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CDI07_09260 PF01494 FAD binding domain CDI07_09265 PF01470 Pyroglutamyl peptidase CDI07_09290 PF01171 PP-loop family CDI07_09300 PF13180 PDZ domain CDI07_09305 PF00535 Glycosyl transferase family 2 CDI07_09310 PF00483 Nucleotidyl transferase CDI07_09315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDI07_09315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDI07_09315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDI07_09325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDI07_09325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDI07_09325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDI07_09355 PF04321 RmlD substrate binding domain CDI07_09360 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDI07_09365 PF16363 GDP-mannose 4,6 dehydratase CDI07_09370 PF00483 Nucleotidyl transferase CDI07_09390 PF00232 Glycosyl hydrolase family 1 CDI07_09395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDI07_09400 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09405 PF12911 N-terminal TM domain of oligopeptide transport permease C CDI07_09405 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09410 PF00005 ABC transporter CDI07_09410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_09415 PF00005 ABC transporter CDI07_09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_09420 PF01380 SIS domain CDI07_09425 PF01301 Glycosyl hydrolases family 35 CDI07_09430 PF16916 Dimerisation domain of Zinc Transporter CDI07_09430 PF01545 Cation efflux family CDI07_09435 PF00282 Pyridoxal-dependent decarboxylase conserved domain CDI07_09440 PF00999 Sodium/hydrogen exchanger family CDI07_09440 PF02254 TrkA-N domain CDI07_09465 PF09095 Domain of unknown function (DUF1926) CDI07_09465 PF03065 Glycosyl hydrolase family 57 CDI07_09465 PF09094 Domain of unknown function (DUF1925) CDI07_09470 PF01171 PP-loop family CDI07_09485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDI07_09490 PF00571 CBS domain CDI07_09490 PF00478 IMP dehydrogenase / GMP reductase domain CDI07_09495 PF00999 Sodium/hydrogen exchanger family CDI07_09500 PF00999 Sodium/hydrogen exchanger family CDI07_09510 PF03129 Anticodon binding domain CDI07_09510 PF13393 Histidyl-tRNA synthetase CDI07_09535 PF01235 Sodium:alanine symporter family CDI07_09580 PF02272 DHHA1 domain CDI07_09580 PF01411 tRNA synthetases class II (A) CDI07_09580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDI07_09590 PF01784 NIF3 (NGG1p interacting factor 3) CDI07_09630 PF02675 S-adenosylmethionine decarboxylase CDI07_09635 PF07549 SecD/SecF GG Motif CDI07_09635 PF02355 Protein export membrane protein CDI07_09645 PF02254 TrkA-N domain CDI07_09645 PF02080 TrkA-C domain CDI07_09655 PF01496 V-type ATPase 116kDa subunit family CDI07_09665 PF01991 ATP synthase (E/31 kDa) subunit CDI07_09675 PF01990 ATP synthase (F/14-kDa) subunit CDI07_09680 PF16886 ATPsynthase alpha/beta subunit N-term extension CDI07_09680 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDI07_09680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDI07_09685 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDI07_09685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDI07_09690 PF01813 ATP synthase subunit D CDI07_09695 PF02272 DHHA1 domain CDI07_09695 PF01411 tRNA synthetases class II (A) CDI07_09695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDI07_09715 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09720 PF02540 NAD synthase CDI07_09735 PF00175 Oxidoreductase NAD-binding domain CDI07_09735 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDI07_09740 PF01979 Amidohydrolase family CDI07_09750 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09755 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09755 PF12911 N-terminal TM domain of oligopeptide transport permease C CDI07_09760 PF00005 ABC transporter CDI07_09760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_09765 PF00005 ABC transporter CDI07_09765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDI07_09775 PF02540 NAD synthase CDI07_09785 PF00120 Glutamine synthetase, catalytic domain CDI07_09785 PF03951 Glutamine synthetase, beta-Grasp domain CDI07_09825 PF06745 KaiC CDI07_09845 PF10672 S-adenosylmethionine-dependent methyltransferase CDI07_09845 PF17785 PUA-like domain CDI07_09860 PF01546 Peptidase family M20/M25/M40 CDI07_09860 PF07687 Peptidase dimerisation domain CDI07_09870 PF03169 OPT oligopeptide transporter protein CDI07_09875 PF12706 Beta-lactamase superfamily domain CDI07_09875 PF00753 Metallo-beta-lactamase superfamily CDI07_09880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDI07_09880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDI07_09880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDI07_09880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDI07_09890 PF01209 ubiE/COQ5 methyltransferase family CDI07_09895 PF03459 TOBE domain CDI07_09895 PF00005 ABC transporter CDI07_09895 PF17912 MalK OB fold domain CDI07_09905 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09910 PF00528 Binding-protein-dependent transport system inner membrane component CDI07_09915 PF01547 Bacterial extracellular solute-binding protein CDI07_09920 PF00128 Alpha amylase, catalytic domain CDI07_09920 PF02903 Alpha amylase, N-terminal ig-like domain CDI07_09925 PF11495 Archaeal transcriptional regulator TrmB CDI07_09925 PF01978 Sugar-specific transcriptional regulator TrmB CDI07_09930 PF08323 Starch synthase catalytic domain CDI07_09930 PF00534 Glycosyl transferases group 1 CDI07_09940 PF04055 Radical SAM superfamily CDI07_09940 PF06968 Biotin and Thiamin Synthesis associated domain CDI07_09945 PF08264 Anticodon-binding domain of tRNA CDI07_09945 PF00133 tRNA synthetases class I (I, L, M and V) CDI07_09970 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CDI07_09970 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CDI07_10005 PF00156 Phosphoribosyl transferase domain CDI07_10010 PF02867 Ribonucleotide reductase, barrel domain CDI07_10010 PF00317 Ribonucleotide reductase, all-alpha domain CDI07_10010 PF03477 ATP cone domain CDI07_10020 PF13344 Haloacid dehalogenase-like hydrolase CDI07_10055 PF17863 AAA lid domain CDI07_10055 PF07726 ATPase family associated with various cellular activities (AAA) CDI07_10070 PF00535 Glycosyl transferase family 2 CDI07_10075 PF00534 Glycosyl transferases group 1 CDI07_10075 PF13439 Glycosyltransferase Family 4 CDI07_10080 PF13439 Glycosyltransferase Family 4 CDI07_10080 PF00534 Glycosyl transferases group 1 CDI07_10090 PF00535 Glycosyl transferase family 2