A3L12_00010	SM00642	Alpha-amylase domain
A3L12_00015	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_00025	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_00030	SM00881	CoA binding domain
A3L12_00055	SM00382	ATPases associated with a variety of cellular activities
A3L12_00080	SM00981	A3L12_00080
A3L12_00105	SM00382	ATPases associated with a variety of cellular activities
A3L12_00165	SM01022	A3L12_00165
A3L12_00190	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A3L12_00250	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_00280	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L12_00295	SM00529	Helix-turn-helix diphteria tox regulatory element
A3L12_00305	SM00382	ATPases associated with a variety of cellular activities
A3L12_00315	SM00518	AP endonuclease family 2
A3L12_00345	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
A3L12_00345	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
A3L12_00345	SM00486	DNA polymerase type-B family
A3L12_00375	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L12_00445	SM00948	Proteasome subunit A N-terminal signature  Add an annotation
A3L12_00455	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L12_00455	SM00322	K homology RNA-binding domain
A3L12_00475	SM00709	Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
A3L12_00490	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_00515	SM00653	domain present in translation initiation factor eIF2B and eIF5
A3L12_00520	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
A3L12_00520	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
A3L12_00520	SM00350	minichromosome  maintenance proteins
A3L12_00605	SM01382	A3L12_00605
A3L12_00605	SM01383	A3L12_00605
A3L12_00620	SM00322	K homology RNA-binding domain
A3L12_00635	SM00538	A domain found in a protein subunit of human RNase MRP and RNase P ribonucleoprotein complexes and archaeal proteins.
A3L12_00645	SM01374	A3L12_00645
A3L12_00650	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A3L12_00655	SM00363	S4 RNA-binding domain
A3L12_00680	SM01393	A3L12_00680
A3L12_00685	SM01416	A3L12_00685
A3L12_00720	SM01415	A3L12_00720
A3L12_00740	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_00740	SM01136	A3L12_00740
A3L12_00760	SM00363	S4 RNA-binding domain
A3L12_00760	SM01390	A3L12_00760
A3L12_00770	SM00662	RNA polymerases D
A3L12_00810	SM01192	A3L12_00810
A3L12_00810	SM01193	A3L12_00810
A3L12_00825	SM01377	A3L12_00825
A3L12_00870	SM00382	ATPases associated with a variety of cellular activities
A3L12_00870	SM00962	SRP54-type protein, GTPase domain
A3L12_00870	SM00963	SRP54-type protein, helical bundle domain
A3L12_00885	SM00530	Helix-turn-helix XRE-family like proteins 
A3L12_00895	SM00344	helix_turn_helix ASNC type
A3L12_00900	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_00945	SM01240	A3L12_00945
A3L12_00950	SM00849	Metallo-beta-lactamase superfamily
A3L12_00975	SM01384	A3L12_00975
A3L12_01020	SM00938	Nitrogen regulatory protein P-II
A3L12_01035	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A3L12_01060	SM00322	K homology RNA-binding domain
A3L12_01060	SM00849	Metallo-beta-lactamase superfamily
A3L12_01060	SM01027	Beta-Casp domain
A3L12_01065	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_01145	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
A3L12_01145	SM00710	Parallel beta-helix repeats
A3L12_01145	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
A3L12_01165	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L12_01165	SM00487	DEAD-like helicases superfamily
A3L12_01165	SM00490	helicase superfamily c-terminal domain
A3L12_01175	SM00382	ATPases associated with a variety of cellular activities
A3L12_01180	SM00382	ATPases associated with a variety of cellular activities
A3L12_01285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A3L12_01310	SM00320	WD40 repeats
A3L12_01315	SM00382	ATPases associated with a variety of cellular activities
A3L12_01335	SM00487	DEAD-like helicases superfamily
A3L12_01425	SM00996	S-adenosyl-L-homocysteine hydrolase
A3L12_01425	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A3L12_01430	SM00382	ATPases associated with a variety of cellular activities
A3L12_01475	SM00881	CoA binding domain
A3L12_01490	SM00382	ATPases associated with a variety of cellular activities
A3L12_01555	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_01565	SM00803	TATA box binding protein associated factor
A3L12_01570	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_01575	SM00493	A3L12_01575
A3L12_01580	SM00493	A3L12_01580
A3L12_01680	SM00382	ATPases associated with a variety of cellular activities
A3L12_01715	SM00663	RNA polymerase I subunit A N-terminus
A3L12_01730	SM00322	K homology RNA-binding domain
A3L12_01785	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L12_01855	SM00849	Metallo-beta-lactamase superfamily
A3L12_01860	SM00028	Tetratricopeptide repeats
A3L12_01960	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_01975	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L12_01975	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L12_01975	SM00493	A3L12_01975
A3L12_02000	SM00864	Tubulin/FtsZ family, GTPase domain
A3L12_02000	SM00865	Tubulin/FtsZ family, C-terminal domain
A3L12_02010	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A3L12_02010	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A3L12_02015	SM00649	Ribosomal protein L11/L12
A3L12_02045	SM00803	TATA box binding protein associated factor
A3L12_02055	SM00385	domain present in cyclins, TFIIB and Retinoblastoma
A3L12_02095	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L12_02100	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_02110	SM00864	Tubulin/FtsZ family, GTPase domain
A3L12_02110	SM00865	Tubulin/FtsZ family, C-terminal domain
A3L12_02150	SM00530	Helix-turn-helix XRE-family like proteins 
A3L12_02200	SM00849	Metallo-beta-lactamase superfamily
A3L12_02205	SM00881	CoA binding domain
A3L12_02230	SM00530	Helix-turn-helix XRE-family like proteins 
A3L12_02265	SM01206	A3L12_02265
A3L12_02270	SM00931	NOSIC (NUC001) domain
A3L12_02275	SM00855	Phosphoglycerate mutase family
A3L12_02295	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_02330	SM00344	helix_turn_helix ASNC type
A3L12_02385	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_02485	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L12_02495	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_02525	SM00382	ATPases associated with a variety of cellular activities
A3L12_02530	SM00382	ATPases associated with a variety of cellular activities
A3L12_02550	SM01230	A3L12_02550
A3L12_02595	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_02625	SM00382	ATPases associated with a variety of cellular activities
A3L12_02705	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L12_02770	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
A3L12_02770	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
A3L12_02820	SM00382	ATPases associated with a variety of cellular activities
A3L12_02915	SM00984	UDP binding domain
A3L12_02930	SM00748	Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
A3L12_03005	SM00888	EF-1 guanine nucleotide exchange domain
A3L12_03010	SM00028	Tetratricopeptide repeats
A3L12_03135	SM01001	AIR carboxylase
A3L12_03140	SM01209	A3L12_03140
A3L12_03140	SM01210	A3L12_03140
A3L12_03155	SM01211	A3L12_03155
A3L12_03170	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_03170	SM01240	A3L12_03170
A3L12_03230	SM00864	Tubulin/FtsZ family, GTPase domain
A3L12_03250	SM01402	A3L12_03250
A3L12_03265	SM01389	A3L12_03265
A3L12_03270	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L12_03390	SM00382	ATPases associated with a variety of cellular activities
A3L12_03430	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L12_03435	SM00670	Large family of predicted nucleotide-binding domains
A3L12_03445	SM01405	A3L12_03445
A3L12_03465	SM00419	helix_turn_helix, cAMP Regulatory protein
A3L12_03520	SM00849	Metallo-beta-lactamase superfamily
A3L12_03545	SM01022	A3L12_03545
A3L12_03550	SM01022	A3L12_03550
A3L12_03590	SM00382	ATPases associated with a variety of cellular activities
A3L12_03595	SM00382	ATPases associated with a variety of cellular activities
A3L12_03615	SM00382	ATPases associated with a variety of cellular activities
A3L12_03665	SM00382	ATPases associated with a variety of cellular activities
A3L12_03670	SM00090	RIO-like kinase
A3L12_03680	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_03695	SM00966	SpoVT / AbrB like domain 
A3L12_03730	SM01400	A3L12_03730
A3L12_03740	SM00849	Metallo-beta-lactamase superfamily
A3L12_03745	SM00382	ATPases associated with a variety of cellular activities
A3L12_03760	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_03770	SM00382	ATPases associated with a variety of cellular activities
A3L12_03775	SM00382	ATPases associated with a variety of cellular activities
A3L12_03790	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A3L12_03815	SM00382	ATPases associated with a variety of cellular activities
A3L12_03820	SM00933	A3L12_03820
A3L12_03835	SM00382	ATPases associated with a variety of cellular activities
A3L12_03910	SM00460	Transglutaminase/protease-like homologues
A3L12_03995	SM01407	A3L12_03995
A3L12_04065	SM00531	Transcription initiation factor IIE
A3L12_04140	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L12_04165	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_04170	SM00382	ATPases associated with a variety of cellular activities
A3L12_04225	SM00344	helix_turn_helix ASNC type
A3L12_04265	SM00382	ATPases associated with a variety of cellular activities
A3L12_04320	SM00986	Uracil DNA glycosylase superfamily
A3L12_04320	SM00987	UreE urease accessory protein, C-terminal domain 
A3L12_04330	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
A3L12_04330	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
A3L12_04355	SM01007	Class II Aldolase and Adducin N-terminal domain
A3L12_04450	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_04535	SM00981	A3L12_04535
A3L12_04570	SM01133	A3L12_04570
A3L12_04575	SM01192	A3L12_04575
A3L12_04575	SM01193	A3L12_04575
A3L12_04580	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_04585	SM00344	helix_turn_helix ASNC type
A3L12_04645	SM00796	Allophanate hydrolase subunit 1
A3L12_04650	SM00797	Allophanate hydrolase subunit 2
A3L12_04675	SM00769	Water Stress and Hypersensitive response
A3L12_04685	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_04705	SM00881	CoA binding domain
A3L12_04745	SM00382	ATPases associated with a variety of cellular activities
A3L12_04745	SM01074	CDC6, C terminal
A3L12_04760	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L12_04760	SM00382	ATPases associated with a variety of cellular activities
A3L12_04800	SM00420	helix_turn_helix, Deoxyribose operon repressor
A3L12_04800	SM01134	A3L12_04800
A3L12_04850	SM00852	Probable molybdopterin binding domain
A3L12_04855	SM00852	Probable molybdopterin binding domain
A3L12_04880	SM00529	Helix-turn-helix diphteria tox regulatory element
A3L12_04910	SM00986	Uracil DNA glycosylase superfamily
A3L12_04910	SM00987	UreE urease accessory protein, C-terminal domain 
A3L12_05000	SM01118	A3L12_05000
A3L12_05005	SM00344	helix_turn_helix ASNC type
A3L12_05035	SM00899	A3L12_05035
A3L12_05050	SM01194	A3L12_05050
A3L12_05085	SM00651	snRNP Sm proteins
A3L12_05090	SM00642	Alpha-amylase domain
A3L12_05105	SM01152	A3L12_05105
A3L12_05115	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A3L12_05120	SM00852	Probable molybdopterin binding domain
A3L12_05155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_05175	SM00470	ParB-like nuclease domain
A3L12_05185	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_05200	SM00487	DEAD-like helicases superfamily
A3L12_05200	SM00490	helicase superfamily c-terminal domain
A3L12_05235	SM00840	A3L12_05235
A3L12_05265	SM00382	ATPases associated with a variety of cellular activities
A3L12_05295	SM00382	ATPases associated with a variety of cellular activities
A3L12_05295	SM00962	SRP54-type protein, GTPase domain
A3L12_05295	SM00963	SRP54-type protein, helical bundle domain
A3L12_05305	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_05385	SM00946	Prolyl-tRNA synthetase, C-terminal
A3L12_05430	SM00419	helix_turn_helix, cAMP Regulatory protein
A3L12_05460	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_05460	SM00530	Helix-turn-helix XRE-family like proteins 
A3L12_05495	SM00382	ATPases associated with a variety of cellular activities
A3L12_05510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_05520	SM00344	helix_turn_helix ASNC type
A3L12_05530	SM00981	A3L12_05530
A3L12_05535	SM01397	A3L12_05535
A3L12_05550	SM01386	A3L12_05550
A3L12_05550	SM01387	A3L12_05550
A3L12_05610	SM01194	A3L12_05610
A3L12_05615	SM00836	DALR anticodon binding domain
A3L12_05615	SM01016	Arginyl tRNA synthetase N terminal dom
A3L12_05635	SM00984	UDP binding domain
A3L12_05645	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_05745	SM00487	DEAD-like helicases superfamily
A3L12_05745	SM00490	helicase superfamily c-terminal domain
A3L12_05775	SM00822	A3L12_05775
A3L12_05785	SM00382	ATPases associated with a variety of cellular activities
A3L12_05810	SM00659	RNA polymerase subunit CX
A3L12_05815	SM00879	A3L12_05815
A3L12_05845	SM00028	Tetratricopeptide repeats
A3L12_05915	SM01376	A3L12_05915
A3L12_05925	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_05955	SM00966	SpoVT / AbrB like domain 
A3L12_05980	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_06000	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_06010	SM00650	Ribosomal RNA adenine dimethylases
A3L12_06040	SM00870	A3L12_06040
A3L12_06045	SM00845	GatB domain
A3L12_06060	SM00829	Enoylreductase
A3L12_06070	SM00873	B3/4 domain
A3L12_06070	SM00874	tRNA synthetase B5 domain
A3L12_06080	SM00487	DEAD-like helicases superfamily
A3L12_06080	SM00490	helicase superfamily c-terminal domain
A3L12_06090	SM00382	ATPases associated with a variety of cellular activities
A3L12_06140	SM00316	Ribosomal protein S1-like RNA-binding domain
A3L12_06185	SM01118	A3L12_06185
A3L12_06195	SM00382	ATPases associated with a variety of cellular activities
A3L12_06215	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_06305	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L12_06325	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A3L12_06350	SM00382	ATPases associated with a variety of cellular activities
A3L12_06350	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A3L12_06350	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A3L12_06350	SM00487	DEAD-like helicases superfamily
A3L12_06350	SM00493	A3L12_06350
A3L12_06395	SM00487	DEAD-like helicases superfamily
A3L12_06395	SM00490	helicase superfamily c-terminal domain
A3L12_06430	SM00487	DEAD-like helicases superfamily
A3L12_06430	SM00490	helicase superfamily c-terminal domain
A3L12_06460	SM00849	Metallo-beta-lactamase superfamily
A3L12_06490	SM00382	ATPases associated with a variety of cellular activities
A3L12_06490	SM01072	Cell division protein 48 (CDC48) domain 2
A3L12_06490	SM01073	Cell division protein 48 (CDC48) N-terminal domain
A3L12_06505	SM00382	ATPases associated with a variety of cellular activities
A3L12_06525	SM01380	A3L12_06525
A3L12_06530	SM00654	translation initiation factor 6
A3L12_06545	SM01103	A3L12_06545
A3L12_06550	SM01413	A3L12_06550
A3L12_06565	SM00385	domain present in cyclins, TFIIB and Retinoblastoma
A3L12_06570	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A3L12_06570	SM00484	Xeroderma pigmentosum G I-region
A3L12_06570	SM00485	Xeroderma pigmentosum G N-region
A3L12_06575	SM00881	CoA binding domain
A3L12_06590	SM00382	ATPases associated with a variety of cellular activities
A3L12_06590	SM01072	Cell division protein 48 (CDC48) domain 2
A3L12_06590	SM01073	Cell division protein 48 (CDC48) N-terminal domain
A3L12_06600	SM00852	Probable molybdopterin binding domain
A3L12_06650	SM00670	Large family of predicted nucleotide-binding domains
A3L12_06665	SM00481	DNA polymerase alpha chain like domain
A3L12_06675	SM00382	ATPases associated with a variety of cellular activities
A3L12_06690	SM00968	SMC proteins Flexible Hinge Domain
A3L12_06700	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A3L12_06700	SM00487	DEAD-like helicases superfamily
A3L12_06700	SM00490	helicase superfamily c-terminal domain
A3L12_06700	SM00891	ERCC4 domain
A3L12_06715	SM00465	GIY-YIG type nucleases (URI domain)
A3L12_06725	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A3L12_06735	SM00382	ATPases associated with a variety of cellular activities
A3L12_06740	SM00244	prohibitin homologues
A3L12_06755	SM00478	endonuclease III
A3L12_06770	SM00670	Large family of predicted nucleotide-binding domains
A3L12_06815	SM00487	DEAD-like helicases superfamily
A3L12_06815	SM00490	helicase superfamily c-terminal domain
A3L12_06855	SM00493	A3L12_06855
A3L12_06880	SM00981	A3L12_06880
A3L12_06900	SM00881	CoA binding domain
A3L12_06905	SM00478	endonuclease III
A3L12_06905	SM00525	A3L12_06905
A3L12_06910	SM01072	Cell division protein 48 (CDC48) domain 2
A3L12_06920	SM00382	ATPases associated with a variety of cellular activities
A3L12_06945	SM00382	ATPases associated with a variety of cellular activities
A3L12_06970	SM00344	helix_turn_helix ASNC type
A3L12_06975	SM00487	DEAD-like helicases superfamily
A3L12_06975	SM00490	helicase superfamily c-terminal domain
A3L12_07000	SM00382	ATPases associated with a variety of cellular activities
A3L12_07055	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
A3L12_07080	SM00746	metallochaperone-like domain
A3L12_07090	SM00562	A3L12_07090
A3L12_07105	SM01130	A3L12_07105
A3L12_07130	SM00849	Metallo-beta-lactamase superfamily
A3L12_07155	SM00487	DEAD-like helicases superfamily
A3L12_07155	SM00490	helicase superfamily c-terminal domain
A3L12_07175	SM00382	ATPases associated with a variety of cellular activities
A3L12_07180	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_07185	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A3L12_07195	SM00998	Adenylosuccinate lyase C-terminus
A3L12_07285	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_07305	SM00788	Adenylosuccinate synthetase
A3L12_07320	SM01133	A3L12_07320
A3L12_07340	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A3L12_07345	SM00981	A3L12_07345
A3L12_07360	SM00487	DEAD-like helicases superfamily
A3L12_07360	SM00490	helicase superfamily c-terminal domain
A3L12_07450	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L12_07455	SM00729	Elongator protein 3, MiaB family, Radical SAM
A3L12_07475	SM00382	ATPases associated with a variety of cellular activities
A3L12_07510	SM00382	ATPases associated with a variety of cellular activities
A3L12_07515	SM00564	beta-propeller repeat
A3L12_07595	SM00382	ATPases associated with a variety of cellular activities
A3L12_07625	SM00440	C2C2 Zinc finger
A3L12_07625	SM00661	RNA polymerase subunit 9
A3L12_07660	SM01022	A3L12_07660
A3L12_07665	SM00014	Acid phosphatase homologues
A3L12_07675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A3L12_07680	SM00530	Helix-turn-helix XRE-family like proteins 
A3L12_07715	SM00220	Serine/Threonine protein kinases, catalytic domain
A3L12_07775	SM00382	ATPases associated with a variety of cellular activities
A3L12_07800	SM00116	Domain in cystathionine beta-synthase and other proteins.
A3L12_07825	SM00849	Metallo-beta-lactamase superfamily
A3L12_07845	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
A3L12_07860	SM01403	A3L12_07860
A3L12_07870	SM00838	Elongation factor G C-terminus
A3L12_07870	SM00889	Elongation factor G, domain IV
A3L12_07900	SM00387	Histidine kinase-like ATPases
A3L12_07905	SM00322	K homology RNA-binding domain
A3L12_07910	SM00090	RIO-like kinase
A3L12_07915	SM00652	eukaryotic translation initiation factor 1A
A3L12_07930	SM00382	ATPases associated with a variety of cellular activities
A3L12_08100	SM00382	ATPases associated with a variety of cellular activities
A3L12_08145	SM00487	DEAD-like helicases superfamily
A3L12_08150	SM00506	Appr-1"-p processing enzyme
