THERU_00005 SM00382 ATPases associated with a variety of cellular activities THERU_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain THERU_00055 SM00487 DEAD-like helicases superfamily THERU_00055 SM00490 helicase superfamily c-terminal domain THERU_00085 SM01228 THERU_00085 THERU_00120 SM01207 THERU_00120 THERU_00215 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_00260 SM00116 Domain in cystathionine beta-synthase and other proteins. THERU_00260 SM01091 Transporter associated domain THERU_00285 SM00831 Cation transporter/ATPase, N-terminus THERU_00340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor THERU_00365 SM00422 helix_turn_helix, mercury resistance THERU_00370 SM00271 DnaJ molecular chaperone homology domain THERU_00375 SM00357 Cold shock protein domain THERU_00375 SM00382 ATPases associated with a variety of cellular activities THERU_00375 SM00959 Rho termination factor, N-terminal domain THERU_00410 SM00316 Ribosomal protein S1-like RNA-binding domain THERU_00445 SM00411 bacterial (prokaryotic) histone like domain THERU_00535 SM00861 Transketolase, pyrimidine binding domain THERU_00550 SM00986 Uracil DNA glycosylase superfamily THERU_00550 SM00987 UreE urease accessory protein, C-terminal domain THERU_00560 SM00382 ATPases associated with a variety of cellular activities THERU_00565 SM00382 ATPases associated with a variety of cellular activities THERU_00580 SM00989 THERU_00580 THERU_00595 SM00563 Phosphate acyltransferases THERU_00605 SM00481 DNA polymerase alpha chain like domain THERU_00610 SM00331 Sigma factor PP2C-like phosphatases THERU_00610 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain THERU_00635 SM00028 Tetratricopeptide repeats THERU_00640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THERU_00640 SM00245 tail specific protease THERU_00655 SM00244 prohibitin homologues THERU_00665 SM00830 Chorismate mutase type II THERU_00675 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_00710 SM01329 THERU_00710 THERU_00905 SM01234 THERU_00905 THERU_00920 SM00387 Histidine kinase-like ATPases THERU_00920 SM00388 His Kinase A (phosphoacceptor) domain THERU_00940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THERU_00970 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THERU_00990 SM00382 ATPases associated with a variety of cellular activities THERU_01035 SM00220 Serine/Threonine protein kinases, catalytic domain THERU_01040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THERU_01040 SM00245 tail specific protease THERU_01060 SM00855 Phosphoglycerate mutase family THERU_01090 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. THERU_01120 SM00646 THERU_01120 THERU_01145 SM00028 Tetratricopeptide repeats THERU_01155 SM01409 THERU_01155 THERU_01160 SM00072 Guanylate kinase homologues. THERU_01220 SM00487 DEAD-like helicases superfamily THERU_01230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THERU_01255 SM00382 ATPases associated with a variety of cellular activities THERU_01320 SM00460 Transglutaminase/protease-like homologues THERU_01330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THERU_01370 SM00316 Ribosomal protein S1-like RNA-binding domain THERU_01370 SM00322 K homology RNA-binding domain THERU_01375 SM01387 THERU_01375 THERU_01380 SM00116 Domain in cystathionine beta-synthase and other proteins. THERU_01380 SM01240 THERU_01380 THERU_01390 SM00052 Putative diguanylate phosphodiesterase THERU_01390 SM00267 diguanylate cyclase THERU_01445 SM01374 THERU_01445 THERU_01450 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. THERU_01510 SM00316 Ribosomal protein S1-like RNA-binding domain THERU_01530 SM00363 S4 RNA-binding domain THERU_01530 SM01390 THERU_01530 THERU_01535 SM00662 RNA polymerases D THERU_01550 SM00363 S4 RNA-binding domain THERU_01580 SM00470 ParB-like nuclease domain THERU_01615 SM00481 DNA polymerase alpha chain like domain THERU_01680 SM00849 Metallo-beta-lactamase superfamily THERU_01730 SM00904 Riboflavin kinase THERU_01805 SM00930 THERU_01805 THERU_01815 SM00382 ATPases associated with a variety of cellular activities THERU_01815 SM00448 cheY-homologous receiver domain THERU_01820 SM00798 AICARFT/IMPCHase bienzyme THERU_01820 SM00851 MGS-like domain THERU_01825 SM01211 THERU_01825 THERU_01880 SM00642 Alpha-amylase domain THERU_01890 SM01323 THERU_01890 THERU_01895 SM00563 Phosphate acyltransferases THERU_01910 SM00434 DNA Topoisomerase IV THERU_01935 SM00448 cheY-homologous receiver domain THERU_01935 SM00850 LytTr DNA-binding domain THERU_01955 SM00903 Flavin reductase like domain THERU_02050 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs THERU_02050 SM00475 5'-3' exonuclease THERU_02060 SM00881 CoA binding domain THERU_02140 SM00419 helix_turn_helix, cAMP Regulatory protein THERU_02170 SM00411 bacterial (prokaryotic) histone like domain THERU_02175 SM00316 Ribosomal protein S1-like RNA-binding domain THERU_02200 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain THERU_02255 SM00382 ATPases associated with a variety of cellular activities THERU_02270 SM00116 Domain in cystathionine beta-synthase and other proteins. THERU_02275 SM00704 CDGSH-type zinc finger. Function unknown. THERU_02315 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_02325 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THERU_02340 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_02345 SM00382 ATPases associated with a variety of cellular activities THERU_02350 SM01091 Transporter associated domain THERU_02355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor THERU_02370 SM00226 Low molecular weight phosphatase family THERU_02405 SM00318 Staphylococcal nuclease homologues THERU_02410 SM00650 Ribosomal RNA adenine dimethylases THERU_02420 SM00903 Flavin reductase like domain THERU_02435 SM00474 3'-5' exonuclease THERU_02435 SM00482 DNA polymerase A domain THERU_02450 SM00984 UDP binding domain THERU_02555 SM01001 AIR carboxylase THERU_02570 SM01004 Delta-aminolevulinic acid dehydratase THERU_02595 SM00460 Transglutaminase/protease-like homologues THERU_02635 SM00926 Molybdopterin oxidoreductase Fe4S4 domain THERU_02640 SM00926 Molybdopterin oxidoreductase Fe4S4 domain THERU_02655 SM00487 DEAD-like helicases superfamily THERU_02655 SM00490 helicase superfamily c-terminal domain THERU_02665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase THERU_02700 SM00357 Cold shock protein domain THERU_02715 SM00382 ATPases associated with a variety of cellular activities THERU_02720 SM00917 LeuA allosteric (dimerisation) domain THERU_02740 SM01005 Alanine racemase, C-terminal domain THERU_02770 SM00267 diguanylate cyclase THERU_02805 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THERU_02810 SM00382 ATPases associated with a variety of cellular activities THERU_02815 SM00878 Biotin carboxylase C-terminal domain THERU_02835 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_02860 SM00732 Likely ribonuclease with RNase H fold. THERU_02880 SM00382 ATPases associated with a variety of cellular activities THERU_02885 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family THERU_02910 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_02915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THERU_02915 SM00387 Histidine kinase-like ATPases THERU_02915 SM00388 His Kinase A (phosphoacceptor) domain THERU_02950 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_02960 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_02985 SM00382 ATPases associated with a variety of cellular activities THERU_03035 SM00382 ATPases associated with a variety of cellular activities THERU_03105 SM01400 THERU_03105 THERU_03125 SM00463 Small MutS-related domain THERU_03125 SM00533 DNA-binding domain of DNA mismatch repair MUTS family THERU_03125 SM00534 ATPase domain of DNA mismatch repair MUTS family THERU_03130 SM00382 ATPases associated with a variety of cellular activities THERU_03135 SM00028 Tetratricopeptide repeats THERU_03145 SM00382 ATPases associated with a variety of cellular activities THERU_03185 SM01133 THERU_03185 THERU_03225 SM00852 Probable molybdopterin binding domain THERU_03260 SM00014 Acid phosphatase homologues THERU_03320 SM00363 S4 RNA-binding domain THERU_03330 SM00788 Adenylosuccinate synthetase THERU_03355 SM00822 THERU_03355 THERU_03365 SM00028 Tetratricopeptide repeats THERU_03395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 THERU_03395 SM00481 DNA polymerase alpha chain like domain THERU_03395 SM00483 DNA polymerase X family THERU_03420 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_03445 SM01133 THERU_03445 THERU_03495 SM00935 Outer membrane protein (OmpH-like) THERU_03510 SM00226 Low molecular weight phosphatase family THERU_03520 SM00382 ATPases associated with a variety of cellular activities THERU_03520 SM00962 SRP54-type protein, GTPase domain THERU_03520 SM00963 SRP54-type protein, helical bundle domain THERU_03555 SM00116 Domain in cystathionine beta-synthase and other proteins. THERU_03565 SM00382 ATPases associated with a variety of cellular activities THERU_03610 SM00382 ATPases associated with a variety of cellular activities THERU_03610 SM00962 SRP54-type protein, GTPase domain THERU_03610 SM00963 SRP54-type protein, helical bundle domain THERU_03615 SM00382 ATPases associated with a variety of cellular activities THERU_03615 SM00464 Found in ATP-dependent protease La (LON) THERU_03660 SM00562 THERU_03660 THERU_03685 SM00845 GatB domain THERU_03705 SM00996 S-adenosyl-L-homocysteine hydrolase THERU_03705 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THERU_03730 SM00899 THERU_03730 THERU_03780 SM00382 ATPases associated with a variety of cellular activities THERU_03800 SM00493 THERU_03800 THERU_03865 SM00450 Rhodanese Homology Domain THERU_03920 SM00487 DEAD-like helicases superfamily THERU_03920 SM00490 helicase superfamily c-terminal domain THERU_03940 SM00878 Biotin carboxylase C-terminal domain THERU_03975 SM00478 endonuclease III THERU_03975 SM00525 THERU_03975 THERU_04060 SM00984 UDP binding domain THERU_04100 SM00858 THERU_04100 THERU_04105 SM00052 Putative diguanylate phosphodiesterase THERU_04125 SM00957 SecA DEAD-like domain THERU_04125 SM00958 SecA preprotein cross-linking domain THERU_04135 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_04170 SM00411 bacterial (prokaryotic) histone like domain THERU_04200 SM00382 ATPases associated with a variety of cellular activities THERU_04200 SM01086 C-terminal, D2-small domain, of ClpB protein THERU_04245 SM00838 Elongation factor G C-terminus THERU_04270 SM00487 DEAD-like helicases superfamily THERU_04270 SM00491 THERU_04270 THERU_04320 SM00387 Histidine kinase-like ATPases THERU_04320 SM00433 TopoisomeraseII THERU_04330 SM00382 ATPases associated with a variety of cellular activities THERU_04330 SM01086 C-terminal, D2-small domain, of ClpB protein THERU_04455 SM00487 DEAD-like helicases superfamily THERU_04455 SM00490 helicase superfamily c-terminal domain THERU_04500 SM00382 ATPases associated with a variety of cellular activities THERU_04585 SM00849 Metallo-beta-lactamase superfamily THERU_04590 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THERU_04595 SM00267 diguanylate cyclase THERU_04600 SM00420 helix_turn_helix, Deoxyribose operon repressor THERU_04615 SM00091 PAS domain THERU_04615 SM00387 Histidine kinase-like ATPases THERU_04615 SM00388 His Kinase A (phosphoacceptor) domain THERU_04620 SM00382 ATPases associated with a variety of cellular activities THERU_04620 SM00448 cheY-homologous receiver domain THERU_04665 SM00382 ATPases associated with a variety of cellular activities THERU_04670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain THERU_04685 SM00028 Tetratricopeptide repeats THERU_04690 SM00849 Metallo-beta-lactamase superfamily THERU_04785 SM00465 GIY-YIG type nucleases (URI domain) THERU_04815 SM00382 ATPases associated with a variety of cellular activities THERU_04945 SM00028 Tetratricopeptide repeats THERU_04960 SM00989 THERU_04960 THERU_05000 SM00382 ATPases associated with a variety of cellular activities THERU_05030 SM00950 THERU_05030 THERU_05040 SM00487 DEAD-like helicases superfamily THERU_05040 SM00490 helicase superfamily c-terminal domain THERU_05085 SM00382 ATPases associated with a variety of cellular activities THERU_05100 SM00465 GIY-YIG type nucleases (URI domain) THERU_05135 SM00530 Helix-turn-helix XRE-family like proteins THERU_05180 SM01340 THERU_05180 THERU_05215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THERU_05215 SM00954 Region found in RelA / SpoT proteins THERU_05225 SM00363 S4 RNA-binding domain THERU_05325 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_05335 SM00257 Lysin motif THERU_05365 SM00450 Rhodanese Homology Domain THERU_05375 SM00998 Adenylosuccinate lyase C-terminus THERU_05410 SM01130 THERU_05410 THERU_05445 SM00878 Biotin carboxylase C-terminal domain THERU_05465 SM00028 Tetratricopeptide repeats THERU_05475 SM00836 DALR anticodon binding domain THERU_05475 SM01016 Arginyl tRNA synthetase N terminal dom THERU_05480 SM01209 THERU_05480 THERU_05480 SM01210 THERU_05480 THERU_05510 SM00479 THERU_05510 THERU_05575 SM00448 cheY-homologous receiver domain THERU_05575 SM00862 Transcriptional regulatory protein, C terminal THERU_05580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THERU_05580 SM00387 Histidine kinase-like ATPases THERU_05580 SM00388 His Kinase A (phosphoacceptor) domain THERU_05590 SM01192 THERU_05590 THERU_05590 SM01193 THERU_05590 THERU_05645 SM01152 THERU_05645 THERU_05655 SM00840 THERU_05655 THERU_05660 SM00852 Probable molybdopterin binding domain THERU_05670 SM00382 ATPases associated with a variety of cellular activities THERU_05675 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) THERU_05675 SM00091 PAS domain THERU_05675 SM00267 diguanylate cyclase THERU_05715 SM00382 ATPases associated with a variety of cellular activities THERU_05715 SM00994 ClpX C4-type zinc finger THERU_05715 SM01086 C-terminal, D2-small domain, of ClpB protein THERU_05790 SM00967 RNA 2'-O ribose methyltransferase substrate binding THERU_05810 SM01007 Class II Aldolase and Adducin N-terminal domain THERU_05850 SM00091 PAS domain THERU_05850 SM00382 ATPases associated with a variety of cellular activities THERU_05880 SM00851 MGS-like domain THERU_05990 SM00052 Putative diguanylate phosphodiesterase THERU_05990 SM00267 diguanylate cyclase THERU_05995 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_06010 SM01350 THERU_06010 THERU_06060 SM00448 cheY-homologous receiver domain THERU_06060 SM00862 Transcriptional regulatory protein, C terminal THERU_06065 SM00382 ATPases associated with a variety of cellular activities THERU_06070 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_06140 SM00358 Double-stranded RNA binding motif THERU_06140 SM00535 Ribonuclease III family THERU_06145 SM00825 Beta-ketoacyl synthase THERU_06150 SM00823 Phosphopantetheine attachment site THERU_06190 SM00829 Enoylreductase THERU_06195 SM00267 diguanylate cyclase THERU_06205 SM01209 THERU_06205 THERU_06215 SM00842 Cell division protein FtsA THERU_06220 SM00864 Tubulin/FtsZ family, GTPase domain THERU_06220 SM00865 Tubulin/FtsZ family, C-terminal domain THERU_06230 SM00028 Tetratricopeptide repeats THERU_06260 SM00859 Semialdehyde dehydrogenase, NAD binding domain THERU_06275 SM00960 Roadblock/LC7 domain THERU_06325 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_06325 SM00876 Biotin and Thiamin Synthesis associated domain THERU_06355 SM00028 Tetratricopeptide repeats THERU_06360 SM00855 Phosphoglycerate mutase family THERU_06385 SM00478 endonuclease III THERU_06415 SM00155 Phospholipase D. Active site motifs. THERU_06415 SM00382 ATPases associated with a variety of cellular activities THERU_06445 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain THERU_06550 SM00938 Nitrogen regulatory protein P-II THERU_06610 SM00487 DEAD-like helicases superfamily THERU_06610 SM00490 helicase superfamily c-terminal domain THERU_06635 SM00881 CoA binding domain THERU_06660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain THERU_06690 SM00881 CoA binding domain THERU_06710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 THERU_06710 SM00478 endonuclease III THERU_06730 SM00028 Tetratricopeptide repeats THERU_06740 SM00100 Cyclic nucleotide-monophosphate binding domain THERU_06740 SM00116 Domain in cystathionine beta-synthase and other proteins. THERU_06860 SM00966 SpoVT / AbrB like domain THERU_06885 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain THERU_06885 SM00437 Bacterial DNA topoisomerase I DNA-binding domain THERU_06885 SM00487 DEAD-like helicases superfamily THERU_06885 SM00493 THERU_06885 THERU_06900 SM00883 Chaperonin 10 Kd subunit THERU_06990 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain THERU_07040 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. THERU_07040 SM00382 ATPases associated with a variety of cellular activities THERU_07065 SM01230 THERU_07065 THERU_07070 SM00938 Nitrogen regulatory protein P-II THERU_07095 SM00480 DNA polymerase III beta subunit THERU_07110 SM00363 S4 RNA-binding domain THERU_07120 SM00849 Metallo-beta-lactamase superfamily THERU_07140 SM00327 von Willebrand factor (vWF) type A domain THERU_07220 SM00116 Domain in cystathionine beta-synthase and other proteins. THERU_07270 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. THERU_07270 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. THERU_07275 SM00649 Ribosomal protein L11/L12 THERU_07305 SM00663 RNA polymerase I subunit A N-terminus THERU_07320 SM00838 Elongation factor G C-terminus THERU_07320 SM00889 Elongation factor G, domain IV THERU_07330 SM01403 THERU_07330 THERU_07350 SM01382 THERU_07350 THERU_07350 SM01383 THERU_07350 THERU_07365 SM00322 K homology RNA-binding domain THERU_07420 SM00382 ATPases associated with a variety of cellular activities THERU_07425 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain THERU_07425 SM00437 Bacterial DNA topoisomerase I DNA-binding domain THERU_07425 SM00493 THERU_07425 THERU_07495 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_07515 SM00861 Transketolase, pyrimidine binding domain THERU_07545 SM00382 ATPases associated with a variety of cellular activities THERU_07585 SM00316 Ribosomal protein S1-like RNA-binding domain THERU_07585 SM00357 Cold shock protein domain THERU_07585 SM00955 THERU_07585 THERU_07605 SM00937 THERU_07605 THERU_07610 SM00400 zinc finger THERU_07610 SM00493 THERU_07610 THERU_07665 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain THERU_07690 SM00316 Ribosomal protein S1-like RNA-binding domain THERU_07725 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase THERU_07730 SM00382 ATPases associated with a variety of cellular activities THERU_07735 SM00271 DnaJ molecular chaperone homology domain THERU_07780 SM00382 ATPases associated with a variety of cellular activities THERU_07855 SM00052 Putative diguanylate phosphodiesterase THERU_07890 SM00232 JAB/MPN domain THERU_07895 SM00859 Semialdehyde dehydrogenase, NAD binding domain THERU_07920 SM00849 Metallo-beta-lactamase superfamily THERU_07920 SM01027 Beta-Casp domain THERU_07940 SM00448 cheY-homologous receiver domain THERU_07940 SM00862 Transcriptional regulatory protein, C terminal THERU_07950 SM00841 Elongation factor P, C-terminal THERU_07950 SM01185 THERU_07950 THERU_07975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THERU_08045 SM00917 LeuA allosteric (dimerisation) domain THERU_08175 SM00729 Elongator protein 3, MiaB family, Radical SAM THERU_08190 SM00873 B3/4 domain THERU_08190 SM00874 tRNA synthetase B5 domain THERU_08190 SM00896 Ferredoxin-fold anticodon binding domain THERU_08205 SM00322 K homology RNA-binding domain THERU_08205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THERU_08210 SM00533 DNA-binding domain of DNA mismatch repair MUTS family THERU_08210 SM00534 ATPase domain of DNA mismatch repair MUTS family THERU_08315 SM00506 Appr-1"-p processing enzyme THERU_08325 SM00382 ATPases associated with a variety of cellular activities THERU_08325 SM00962 SRP54-type protein, GTPase domain THERU_08355 SM00968 SMC proteins Flexible Hinge Domain THERU_08360 SM00382 ATPases associated with a variety of cellular activities THERU_08360 SM01086 C-terminal, D2-small domain, of ClpB protein THERU_08370 SM00028 Tetratricopeptide repeats THERU_08420 SM00100 Cyclic nucleotide-monophosphate binding domain THERU_08420 SM00419 helix_turn_helix, cAMP Regulatory protein THERU_08440 SM01329 THERU_08440 THERU_08455 SM00382 ATPases associated with a variety of cellular activities THERU_08485 SM00478 endonuclease III THERU_08485 SM00525 THERU_08485