Thena_0001	SM00382	ATPases associated with a variety of cellular activities
Thena_0001	SM00760	Bacterial dnaA protein helix-turn-helix domain
Thena_0002	SM00480	DNA polymerase III beta subunit
Thena_0005	SM00387	Histidine kinase-like ATPases
Thena_0005	SM00433	TopoisomeraseII
Thena_0006	SM00434	DNA Topoisomerase IV
Thena_0014	SM00448	cheY-homologous receiver domain
Thena_0017	SM00448	cheY-homologous receiver domain
Thena_0018	SM00138	Methyltransferase, chemotaxis proteins 
Thena_0027	SM00260	Two component signalling adaptor domain
Thena_0028	SM00073	Histidine Phosphotransfer domain
Thena_0028	SM00260	Two component signalling adaptor domain
Thena_0028	SM00387	Histidine kinase-like ATPases
Thena_0028	SM01231	Thena_0028
Thena_0029	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0032	SM00091	PAS domain
Thena_0032	SM00267	diguanylate cyclase
Thena_0034	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Thena_0039	SM00849	Metallo-beta-lactamase superfamily
Thena_0040	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Thena_0043	SM00883	Chaperonin 10 Kd subunit
Thena_0045	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_0045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Thena_0048	SM00849	Metallo-beta-lactamase superfamily
Thena_0056	SM00935	Outer membrane protein (OmpH-like)
Thena_0063	SM00116	Domain in cystathionine beta-synthase and other proteins.
Thena_0079	SM00382	ATPases associated with a variety of cellular activities
Thena_0081	SM00382	ATPases associated with a variety of cellular activities
Thena_0086	SM00382	ATPases associated with a variety of cellular activities
Thena_0098	SM00849	Metallo-beta-lactamase superfamily
Thena_0104	SM00893	Electron transfer flavoprotein domain
Thena_0105	SM00893	Electron transfer flavoprotein domain
Thena_0116	SM00841	Elongation factor P, C-terminal
Thena_0116	SM01185	Thena_0116
Thena_0118	SM00878	Biotin carboxylase C-terminal domain
Thena_0121	SM00998	Adenylosuccinate lyase C-terminus
Thena_0125	SM01207	Thena_0125
Thena_0127	SM00411	bacterial (prokaryotic) histone like domain
Thena_0135	SM00382	ATPases associated with a variety of cellular activities
Thena_0136	SM00382	ATPases associated with a variety of cellular activities
Thena_0145	SM00507	HNH nucleases
Thena_0147	SM00938	Nitrogen regulatory protein P-II
Thena_0151	SM00382	ATPases associated with a variety of cellular activities
Thena_0152	SM00322	K homology RNA-binding domain
Thena_0152	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0161	SM00843	Thena_0161
Thena_0173	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0176	SM00382	ATPases associated with a variety of cellular activities
Thena_0177	SM00382	ATPases associated with a variety of cellular activities
Thena_0177	SM00962	SRP54-type protein, GTPase domain
Thena_0184	SM00387	Histidine kinase-like ATPases
Thena_0184	SM00388	His Kinase A (phosphoacceptor) domain
Thena_0185	SM00448	cheY-homologous receiver domain
Thena_0185	SM00862	Transcriptional regulatory protein, C terminal
Thena_0189	SM00919	Malic enzyme, NAD binding domain
Thena_0189	SM01274	Thena_0189
Thena_0197	SM00838	Elongation factor G C-terminus
Thena_0198	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0202	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0202	SM00954	Region found in RelA / SpoT proteins
Thena_0203	SM00465	GIY-YIG type nucleases (URI domain)
Thena_0207	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0209	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_0210	SM00363	S4 RNA-binding domain
Thena_0225	SM00382	ATPases associated with a variety of cellular activities
Thena_0231	SM00930	Thena_0231
Thena_0238	SM00838	Elongation factor G C-terminus
Thena_0239	SM01005	Alanine racemase, C-terminal domain
Thena_0241	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0244	SM01400	Thena_0244
Thena_0246	SM00382	ATPases associated with a variety of cellular activities
Thena_0254	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0260	SM00838	Elongation factor G C-terminus
Thena_0260	SM00889	Elongation factor G, domain IV
Thena_0263	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0272	SM00400	zinc finger
Thena_0272	SM00493	Thena_0272
Thena_0276	SM00487	DEAD-like helicases superfamily
Thena_0276	SM00490	helicase superfamily c-terminal domain
Thena_0276	SM00982	Thena_0276
Thena_0276	SM01058	CarD-like/TRCF domain
Thena_0290	SM00382	ATPases associated with a variety of cellular activities
Thena_0302	SM00028	Tetratricopeptide repeats
Thena_0304	SM00382	ATPases associated with a variety of cellular activities
Thena_0305	SM00382	ATPases associated with a variety of cellular activities
Thena_0315	SM00506	Appr-1"-p processing enzyme
Thena_0317	SM00478	endonuclease III
Thena_0321	SM00267	diguanylate cyclase
Thena_0323	SM00028	Tetratricopeptide repeats
Thena_0324	SM00320	WD40 repeats
Thena_0325	SM00880	Thena_0325
Thena_0325	SM01118	Thena_0325
Thena_0333	SM00382	ATPases associated with a variety of cellular activities
Thena_0334	SM00382	ATPases associated with a variety of cellular activities
Thena_0334	SM01086	C-terminal, D2-small domain, of ClpB protein
Thena_0341	SM00881	CoA binding domain
Thena_0360	SM00116	Domain in cystathionine beta-synthase and other proteins.
Thena_0361	SM00563	Phosphate acyltransferases
Thena_0364	SM01078	Thena_0364
Thena_0377	SM00636	Thena_0377
Thena_0379	SM00028	Tetratricopeptide repeats
Thena_0379	SM00671	Sel1-like repeats.
Thena_0393	SM00382	ATPases associated with a variety of cellular activities
Thena_0400	SM00984	UDP binding domain
Thena_0408	SM00382	ATPases associated with a variety of cellular activities
Thena_0418	SM00052	Putative diguanylate phosphodiesterase
Thena_0418	SM00091	PAS domain
Thena_0418	SM00267	diguanylate cyclase
Thena_0426	SM00861	Transketolase, pyrimidine binding domain
Thena_0427	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Thena_0442	SM00486	DNA polymerase type-B family
Thena_0445	SM00989	Thena_0445
Thena_0447	SM00849	Metallo-beta-lactamase superfamily
Thena_0450	SM00267	diguanylate cyclase
Thena_0468	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Thena_0469	SM00257	Lysin motif
Thena_0471	SM00287	Bacterial SH3 domain homologues
Thena_0473	SM00834	Putative regulatory protein
Thena_0479	SM01131	Thena_0479
Thena_0482	SM00363	S4 RNA-binding domain
Thena_0484	SM00316	Ribosomal protein S1-like RNA-binding domain
Thena_0501	SM00838	Elongation factor G C-terminus
Thena_0501	SM00889	Elongation factor G, domain IV
Thena_0503	SM01403	Thena_0503
Thena_0507	SM01382	Thena_0507
Thena_0507	SM01383	Thena_0507
Thena_0510	SM00322	K homology RNA-binding domain
Thena_0514	SM01374	Thena_0514
Thena_0515	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Thena_0525	SM00316	Ribosomal protein S1-like RNA-binding domain
Thena_0529	SM00363	S4 RNA-binding domain
Thena_0529	SM01390	Thena_0529
Thena_0530	SM00662	RNA polymerases D
Thena_0537	SM00855	Phosphoglycerate mutase family
Thena_0542	SM00834	Putative regulatory protein
Thena_0547	SM00529	Helix-turn-helix diphteria tox regulatory element
Thena_0547	SM00899	Thena_0547
Thena_0548	SM00899	Thena_0548
Thena_0554	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
Thena_0554	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
Thena_0555	SM00649	Ribosomal protein L11/L12
Thena_0562	SM00327	von Willebrand factor (vWF) type A domain
Thena_0563	SM00331	Sigma factor PP2C-like phosphatases
Thena_0563	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
Thena_0564	SM00220	Serine/Threonine protein kinases, catalytic domain
Thena_0564	SM00671	Sel1-like repeats.
Thena_0568	SM00917	LeuA allosteric (dimerisation) domain
Thena_0579	SM00481	DNA polymerase alpha chain like domain
Thena_0582	SM00481	DNA polymerase alpha chain like domain
Thena_0583	SM00478	endonuclease III
Thena_0583	SM00525	Thena_0583
Thena_0584	SM00316	Ribosomal protein S1-like RNA-binding domain
Thena_0584	SM00322	K homology RNA-binding domain
Thena_0585	SM01387	Thena_0585
Thena_0586	SM00732	Likely ribonuclease with RNase H fold.
Thena_0598	SM00382	ATPases associated with a variety of cellular activities
Thena_0603	SM00849	Metallo-beta-lactamase superfamily
Thena_0612	SM00904	Riboflavin kinase
Thena_0623	SM00798	AICARFT/IMPCHase bienzyme
Thena_0623	SM00851	MGS-like domain
Thena_0624	SM01209	Thena_0624
Thena_0624	SM01210	Thena_0624
Thena_0625	SM01001	AIR carboxylase
Thena_0629	SM00845	GatB domain
Thena_0630	SM00028	Tetratricopeptide repeats
Thena_0631	SM00732	Likely ribonuclease with RNase H fold.
Thena_0646	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Thena_0647	SM01130	Thena_0647
Thena_0672	SM00842	Cell division protein FtsA
Thena_0673	SM00864	Tubulin/FtsZ family, GTPase domain
Thena_0673	SM00865	Tubulin/FtsZ family, C-terminal domain
Thena_0676	SM00937	Thena_0676
Thena_0689	SM00491	Thena_0689
Thena_0693	SM00873	B3/4 domain
Thena_0693	SM00874	tRNA synthetase B5 domain
Thena_0693	SM00896	Ferredoxin-fold anticodon binding domain
Thena_0695	SM00481	DNA polymerase alpha chain like domain
Thena_0697	SM00481	DNA polymerase alpha chain like domain
Thena_0708	SM00849	Metallo-beta-lactamase superfamily
Thena_0716	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Thena_0724	SM00836	DALR anticodon binding domain
Thena_0724	SM01016	Arginyl tRNA synthetase N terminal dom
Thena_0728	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
Thena_0729	SM00851	MGS-like domain
Thena_0729	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
Thena_0733	SM00382	ATPases associated with a variety of cellular activities
Thena_0736	SM00840	Thena_0736
Thena_0737	SM00967	RNA 2'-O ribose methyltransferase substrate binding
Thena_0747	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_0748	SM00530	Helix-turn-helix XRE-family like proteins 
Thena_0749	SM00450	Rhodanese Homology Domain
Thena_0750	SM00463	Small MutS-related domain
Thena_0750	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
Thena_0750	SM00534	ATPase domain of DNA mismatch repair MUTS family
Thena_0754	SM00382	ATPases associated with a variety of cellular activities
Thena_0754	SM00393	Putative single-stranded nucleic acids-binding domain
Thena_0760	SM00478	endonuclease III
Thena_0760	SM00525	Thena_0760
Thena_0763	SM00357	Cold shock protein domain
Thena_0765	SM00490	helicase superfamily c-terminal domain
Thena_0765	SM00957	SecA DEAD-like domain
Thena_0765	SM00958	SecA preprotein cross-linking domain
Thena_0770	SM00861	Transketolase, pyrimidine binding domain
Thena_0771	SM00382	ATPases associated with a variety of cellular activities
Thena_0773	SM00986	Uracil DNA glycosylase superfamily
Thena_0773	SM00987	UreE urease accessory protein, C-terminal domain 
Thena_0776	SM00363	S4 RNA-binding domain
Thena_0782	SM00271	DnaJ molecular chaperone homology domain
Thena_0783	SM00422	helix_turn_helix, mercury resistance
Thena_0784	SM00382	ATPases associated with a variety of cellular activities
Thena_0784	SM01086	C-terminal, D2-small domain, of ClpB protein
Thena_0786	SM00072	Guanylate kinase homologues.
Thena_0787	SM01409	Thena_0787
Thena_0790	SM01230	Thena_0790
Thena_0799	SM00487	DEAD-like helicases superfamily
Thena_0799	SM00490	helicase superfamily c-terminal domain
Thena_0803	SM01152	Thena_0803
Thena_0805	SM01007	Class II Aldolase and Adducin N-terminal domain
Thena_0808	SM00996	S-adenosyl-L-homocysteine hydrolase
Thena_0808	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Thena_0810	SM00052	Putative diguanylate phosphodiesterase
Thena_0810	SM00091	PAS domain
Thena_0810	SM00267	diguanylate cyclase
Thena_0811	SM00357	Cold shock protein domain
Thena_0818	SM00487	DEAD-like helicases superfamily
Thena_0818	SM00490	helicase superfamily c-terminal domain
Thena_0823	SM00382	ATPases associated with a variety of cellular activities
Thena_0841	SM00984	UDP binding domain
Thena_0868	SM01130	Thena_0868
Thena_0874	SM00422	helix_turn_helix, mercury resistance
Thena_0878	SM00052	Putative diguanylate phosphodiesterase
Thena_0878	SM00267	diguanylate cyclase
Thena_0885	SM00363	S4 RNA-binding domain
Thena_0889	SM00278	Helix-hairpin-helix DNA-binding motif class 1
Thena_0890	SM00382	ATPases associated with a variety of cellular activities
Thena_0891	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
Thena_0891	SM00475	5'-3' exonuclease
Thena_0894	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0896	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0899	SM00267	diguanylate cyclase
Thena_0903	SM00382	ATPases associated with a variety of cellular activities
Thena_0904	SM00788	Adenylosuccinate synthetase
Thena_0908	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
Thena_0908	SM00091	PAS domain
Thena_0908	SM00267	diguanylate cyclase
Thena_0909	SM00870	Thena_0909
Thena_0917	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0919	SM00226	Low molecular weight phosphatase family
Thena_0922	SM00530	Helix-turn-helix XRE-family like proteins 
Thena_0930	SM00267	diguanylate cyclase
Thena_0932	SM00320	WD40 repeats
Thena_0938	SM00357	Cold shock protein domain
Thena_0938	SM00382	ATPases associated with a variety of cellular activities
Thena_0938	SM00959	Rho termination factor, N-terminal domain
Thena_0944	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Thena_0949	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Thena_0954	SM00448	cheY-homologous receiver domain
Thena_0957	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
Thena_0959	SM00852	Probable molybdopterin binding domain
Thena_0960	SM00852	Probable molybdopterin binding domain
Thena_0962	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_0963	SM00852	Probable molybdopterin binding domain
Thena_0964	SM00852	Probable molybdopterin binding domain
Thena_0965	SM00849	Metallo-beta-lactamase superfamily
Thena_0969	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
Thena_0969	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
Thena_0969	SM00493	Thena_0969
Thena_0978	SM00564	beta-propeller repeat
Thena_0980	SM00382	ATPases associated with a variety of cellular activities
Thena_0988	SM00382	ATPases associated with a variety of cellular activities
Thena_0988	SM00962	SRP54-type protein, GTPase domain
Thena_0988	SM00963	SRP54-type protein, helical bundle domain
Thena_0989	SM00382	ATPases associated with a variety of cellular activities
Thena_0989	SM00962	SRP54-type protein, GTPase domain
Thena_0992	SM00968	SMC proteins Flexible Hinge Domain
Thena_0995	SM00861	Transketolase, pyrimidine binding domain
Thena_1017	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Thena_1025	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Thena_1028	SM00028	Tetratricopeptide repeats
Thena_1030	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_1031	SM00382	ATPases associated with a variety of cellular activities
Thena_1032	SM00382	ATPases associated with a variety of cellular activities
Thena_1041	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Thena_1042	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Thena_1042	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Thena_1043	SM00267	diguanylate cyclase
Thena_1043	SM00448	cheY-homologous receiver domain
Thena_1052	SM00382	ATPases associated with a variety of cellular activities
Thena_1053	SM01117	Thena_1053
Thena_1055	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Thena_1067	SM00052	Putative diguanylate phosphodiesterase
Thena_1067	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Thena_1067	SM00091	PAS domain
Thena_1067	SM00267	diguanylate cyclase
Thena_1069	SM00344	helix_turn_helix ASNC type
Thena_1072	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Thena_1087	SM00881	CoA binding domain
Thena_1097	SM00028	Tetratricopeptide repeats
Thena_1099	SM00487	DEAD-like helicases superfamily
Thena_1099	SM00490	helicase superfamily c-terminal domain
Thena_1100	SM00052	Putative diguanylate phosphodiesterase
Thena_1105	SM00849	Metallo-beta-lactamase superfamily
Thena_1107	SM00382	ATPases associated with a variety of cellular activities
Thena_1113	SM00382	ATPases associated with a variety of cellular activities
Thena_1126	SM00052	Putative diguanylate phosphodiesterase
Thena_1126	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Thena_1126	SM00091	PAS domain
Thena_1126	SM00267	diguanylate cyclase
Thena_1127	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Thena_1128	SM00267	diguanylate cyclase
Thena_1129	SM00849	Metallo-beta-lactamase superfamily
Thena_1130	SM00382	ATPases associated with a variety of cellular activities
Thena_1135	SM00382	ATPases associated with a variety of cellular activities
Thena_1140	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Thena_1145	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Thena_1147	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1156	SM00834	Putative regulatory protein
Thena_1160	SM00093	SERine  Proteinase INhibitors
Thena_1165	SM00909	Sporulation and spore germination
Thena_1166	SM00646	Thena_1166
Thena_1174	SM00091	PAS domain
Thena_1174	SM00267	diguanylate cyclase
Thena_1178	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1190	SM01329	Thena_1190
Thena_1195	SM00859	Semialdehyde dehydrogenase, NAD binding domain
Thena_1199	SM00883	Chaperonin 10 Kd subunit
Thena_1204	SM00382	ATPases associated with a variety of cellular activities
Thena_1204	SM00994	ClpX C4-type zinc finger
Thena_1204	SM01086	C-terminal, D2-small domain, of ClpB protein
Thena_1205	SM00028	Tetratricopeptide repeats
Thena_1206	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Thena_1206	SM00091	PAS domain
Thena_1206	SM00267	diguanylate cyclase
Thena_1207	SM00052	Putative diguanylate phosphodiesterase
Thena_1207	SM00091	PAS domain
Thena_1207	SM00267	diguanylate cyclase
Thena_1208	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_1209	SM00487	DEAD-like helicases superfamily
Thena_1209	SM00490	helicase superfamily c-terminal domain
Thena_1211	SM00650	Ribosomal RNA adenine dimethylases
Thena_1214	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1215	SM01004	Delta-aminolevulinic acid dehydratase
Thena_1216	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1220	SM00320	WD40 repeats
Thena_1227	SM00670	Large family of predicted nucleotide-binding domains
Thena_1232	SM00978	Thena_1232
Thena_1233	SM01211	Thena_1233
Thena_1235	SM00345	helix_turn_helix gluconate operon transcriptional repressor
Thena_1235	SM00895	Thena_1235
Thena_1239	SM00852	Probable molybdopterin binding domain
Thena_1240	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1241	SM00530	Helix-turn-helix XRE-family like proteins 
Thena_1247	SM00116	Domain in cystathionine beta-synthase and other proteins.
Thena_1259	SM00098	Alkaline phosphatase homologues
Thena_1265	SM00382	ATPases associated with a variety of cellular activities
Thena_1266	SM00267	diguanylate cyclase
Thena_1275	SM01192	Thena_1275
Thena_1275	SM01193	Thena_1275
Thena_1278	SM00382	ATPases associated with a variety of cellular activities
Thena_1292	SM01240	Thena_1292
Thena_1298	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Thena_1299	SM00663	RNA polymerase I subunit A N-terminus
Thena_1302	SM00093	SERine  Proteinase INhibitors
Thena_1303	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Thena_1304	SM00028	Tetratricopeptide repeats
Thena_1310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Thena_1310	SM00091	PAS domain
Thena_1310	SM00267	diguanylate cyclase
Thena_1313	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1315	SM00271	DnaJ molecular chaperone homology domain
Thena_1319	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_1349	SM00382	ATPases associated with a variety of cellular activities
Thena_1349	SM00464	Found in ATP-dependent protease La (LON)
Thena_1352	SM00382	ATPases associated with a variety of cellular activities
Thena_1360	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Thena_1383	SM00382	ATPases associated with a variety of cellular activities
Thena_1390	SM00062	Bacterial periplasmic substrate-binding proteins
Thena_1390	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
Thena_1391	SM00382	ATPases associated with a variety of cellular activities
Thena_1392	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Thena_1393	SM00382	ATPases associated with a variety of cellular activities
Thena_1398	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
Thena_1398	SM00245	tail specific protease
Thena_1417	SM00344	helix_turn_helix ASNC type
Thena_1426	SM00881	CoA binding domain
Thena_1431	SM00825	Beta-ketoacyl synthase
Thena_1434	SM00822	Thena_1434
Thena_1435	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
Thena_1443	SM00267	diguanylate cyclase
Thena_1457	SM00849	Metallo-beta-lactamase superfamily
Thena_1459	SM00487	DEAD-like helicases superfamily
Thena_1459	SM00490	helicase superfamily c-terminal domain
Thena_1462	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Thena_1465	SM00448	cheY-homologous receiver domain
Thena_1465	SM00862	Transcriptional regulatory protein, C terminal
Thena_1466	SM00387	Histidine kinase-like ATPases
Thena_1466	SM00388	His Kinase A (phosphoacceptor) domain
Thena_1483	SM00382	ATPases associated with a variety of cellular activities
Thena_1489	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_1500	SM00116	Domain in cystathionine beta-synthase and other proteins.
Thena_1500	SM01091	Transporter associated domain
Thena_1503	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
Thena_1508	SM00052	Putative diguanylate phosphodiesterase
Thena_1508	SM00267	diguanylate cyclase
Thena_1509	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
Thena_1510	SM00902	Iron hydrogenase small subunit
Thena_1510	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Thena_1513	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1518	SM00902	Iron hydrogenase small subunit
Thena_1537	SM00487	DEAD-like helicases superfamily
Thena_1537	SM00490	helicase superfamily c-terminal domain
Thena_1544	SM00487	DEAD-like helicases superfamily
Thena_1544	SM00490	helicase superfamily c-terminal domain
Thena_1549	SM00421	helix_turn_helix, Lux Regulon
Thena_1552	SM00382	ATPases associated with a variety of cellular activities
Thena_1553	SM00382	ATPases associated with a variety of cellular activities
Thena_1564	SM00421	helix_turn_helix, Lux Regulon
Thena_1564	SM00448	cheY-homologous receiver domain
Thena_1576	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_1579	SM00382	ATPases associated with a variety of cellular activities
Thena_1583	SM00878	Biotin carboxylase C-terminal domain
Thena_1586	SM00100	Cyclic nucleotide-monophosphate binding domain
Thena_1586	SM00419	helix_turn_helix, cAMP Regulatory protein
Thena_1588	SM00756	Thena_1588
Thena_1593	SM00100	Cyclic nucleotide-monophosphate binding domain
Thena_1593	SM00419	helix_turn_helix, cAMP Regulatory protein
Thena_1616	SM00518	AP endonuclease family 2
Thena_1627	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
Thena_1639	SM00382	ATPases associated with a variety of cellular activities
Thena_1640	SM00358	Double-stranded RNA binding motif
Thena_1640	SM00535	Ribonuclease III family
Thena_1641	SM00797	Allophanate hydrolase subunit 2
Thena_1642	SM00796	Allophanate hydrolase subunit 1
Thena_1653	SM00091	PAS domain
Thena_1672	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Thena_1672	SM00387	Histidine kinase-like ATPases
Thena_1673	SM00421	helix_turn_helix, Lux Regulon
Thena_1673	SM00448	cheY-homologous receiver domain
Thena_1674	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Thena_1674	SM00091	PAS domain
Thena_1681	SM00938	Nitrogen regulatory protein P-II
Thena_1698	SM00858	Thena_1698
Thena_1701	SM00091	PAS domain
Thena_1703	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
Thena_1705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Thena_1705	SM00387	Histidine kinase-like ATPases
Thena_1705	SM00388	His Kinase A (phosphoacceptor) domain
Thena_1706	SM00448	cheY-homologous receiver domain
Thena_1706	SM00862	Transcriptional regulatory protein, C terminal
Thena_1707	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_1707	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
Thena_1714	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
Thena_1715	SM00116	Domain in cystathionine beta-synthase and other proteins.
Thena_1715	SM00924	MgtE intracellular N domain
Thena_1717	SM00729	Elongator protein 3, MiaB family, Radical SAM
Thena_1717	SM00876	Biotin and Thiamin Synthesis associated domain
Thena_1720	SM00849	Metallo-beta-lactamase superfamily
Thena_1741	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
Thena_1742	SM00529	Helix-turn-helix diphteria tox regulatory element
Thena_1758	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
Thena_1760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_1762	SM00849	Metallo-beta-lactamase superfamily
Thena_1763	SM00917	LeuA allosteric (dimerisation) domain
Thena_1783	SM00478	endonuclease III
Thena_1787	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
Thena_1789	SM00244	prohibitin homologues
Thena_1795	SM00899	Thena_1795
Thena_1800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
Thena_1803	SM00852	Probable molybdopterin binding domain
Thena_1804	SM00852	Probable molybdopterin binding domain
Thena_1822	SM00028	Tetratricopeptide repeats
Thena_1833	SM00562	Thena_1833
Thena_1834	SM00470	ParB-like nuclease domain
Thena_1845	SM00116	Domain in cystathionine beta-synthase and other proteins.
Thena_1846	SM00382	ATPases associated with a variety of cellular activities
Thena_1850	SM00393	Putative single-stranded nucleic acids-binding domain
Thena_1850	SM01245	Thena_1850
Thena_1852	SM01234	Thena_1852
Thena_R0046	SM00881	CoA binding domain
