locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Thena_0001 Thena_0001 Thena_0001 52 1380 + Chromosomal replication initiator protein dnaA COGs: COG0593 ATPase involved in DNA replication initiation~HAMAP: Chromosomal replication control%2C initiator DnaA~InterPro IPR001957:IPR013317:IPR013159:IPR003593~KEGG: tmt:Tmath_0001 chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication control%2C initiator (DnaA)/regulator (Hda)%3B Chromosomal replication initiator%2C DnaA C-terminal~SMART: Chromosomal replication initiator%2C DnaA C-terminal%3B ATPase%2C AAA+ type%2C core~SPTR: Chromosomal replication initiator protein dnaA%3B~TIGRFAM: Chromosomal replication control%2C initiator DnaA~IMG reference gene:2504783364~PFAM: domain%3B Bacterial dnaA protein~TIGRFAM: chromosomal replication initiator protein DnaA gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0001 Thena_0002 Thena_0002 Thena_0002 1610 2722 + DNA polymerase III%2C beta subunit COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)~InterPro IPR001001~KEGG: vok:COSY_0002 DNA polymerase III beta subunit~PFAM: DNA polymerase III%2C beta chain~SMART: DNA polymerase III%2C beta chain~SPTR: DNA polymerase III beta subunit%3B~TIGRFAM: DNA polymerase III%2C beta chain~IMG reference gene:2504783365~PFAM: DNA polymerase III beta subunit%2C C-terminal domain%3B DNA polymerase III beta subunit%2C N-terminal domain%3B DNA polymerase III beta subunit%2C central domain~TIGRFAM: DNA polymerase III%2C beta subunit gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0002 Thena_0003 Thena_0003 Thena_0003 2732 3703 + DNA replication and repair protein recF COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway)~HAMAP: DNA replication and repair protein recF~InterPro IPR003395~KEGG: csc:Csac_0003 DNA replication and repair protein RecF~PFAM: RecF/RecN/SMC protein%2C N-terminal~SPTR: DNA replication and repair protein RecF%3B~IMG reference gene:2504783366 gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0003 Thena_0004 Thena_0004 Thena_0004 3712 4152 + protein of unknown function DUF721 InterPro IPR007922~KEGG: ddf:DEFDS_0268 hypothetical protein~PFAM: Protein of unknown function DUF721~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783367~PFAM: Protein of unknown function (DUF721) gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0004 Thena_0005 Thena_0005 Thena_0005 4157 6055 + DNA topoisomerase (ATP-hydrolyzing) COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit~InterProIPR003594:IPR013506:IPR006171:IPR002288:IPR 001241~KEGG: tit:Thit_0010 DNA gyrase%2C B subunit~PFAM: DNA topoisomerase%2C type IIA%2C subunit B%2C region 2%3B ATP-binding region%2C ATPase-like%3B Toprim domain%3B DNA topoisomerase%2C type IIA%2C subunit B%2C C-terminal~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA topoisomerase%2C type IIA%2C subunit B or N-terminal%3B ATP-binding region%2C ATPase-like~SPTR: DNA gyrase%2C B subunit%3B~IMG reference gene:2504783368~PFAM: Toprim domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B DNA gyrase B%3B DNA gyrase B subunit%2C carboxyl terminus~TIGRFAM: DNA gyrase%2C B subunit gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0005 Thena_0006 Thena_0006 Thena_0006 6048 8462 + DNA gyrase%2C A subunit COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit~InterPro IPR005743:IPR002205:IPR006691~KEGG: DNA gyrase subunit A~PFAM: DNA topoisomerase%2C type IIA%2C subunit A or C-terminal%3B DNA gyrase/topoisomerase IV%2C subunit A%2C C-terminal beta-pinwheel~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA topoisomerase%2C type IIA%2C subunit A or C-terminal~SPTR: DNA gyrase%2C A subunit%3B~TIGRFAM: DNA gyrase%2C subunit A~IMG reference gene:2504783369~PFAM: DNA gyrase/topoisomerase IV%2C subunit A%3B DNA gyrase C-terminal domain%2C beta-propeller~TIGRFAM: DNA gyrase%2C A subunit gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0006 Thena_0007 Thena_0007 Thena_0007 8459 9403 + Trans-hexaprenyltranstransferase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: dhd:Dhaf_3361 polyprenyl synthetase~PFAM: Polyprenyl synthetase~PRIAM: Trans-hexaprenyltranstransferase~SPTR: HepT%3B~IMG reference gene:2504783370~PFAM: Polyprenyl synthetase gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0007 Thena_0008 Thena_0008 Thena_0008 9404 10144 + type IV pilus assembly PilZ COGs: COG5581 glycosyltransferase~InterPro IPR009875~KEGG: ate:Athe_2150 type IV pilus assembly PilZ~PFAM: Type IV pilus assembly PilZ~SPTR: Type IV pilus assembly PilZ%3B~IMG reference gene:2504783371~PFAM: PilZ domain gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0008 Thena_0009 Thena_0009 Thena_0009 10247 10918 + RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR014284:IPR012845:IPR007627:IPR007630~KEGG: aoe:Clos_1510 RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG~PFAM: RNA polymerase sigma-70 region 4%3B RNA polymerase sigma-70 region 2~SPTR: RNA polymerase%2C sigma 28 subunit%2C SigD/FliA/WhiG%3B~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG%3B RNA polymerase sigma-70~IMG reference gene:2504783372~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0009 Thena_0010 Thena_0010 Thena_0010 10920 12278 + protein of unknown function DUF342 COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain~InterPro IPR005646~KEGG: cob:COB47_1924 hypothetical protein~PFAM: Protein of unknown function DUF342~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783373~PFAM: Protein of unknown function (DUF342) gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0010 Thena_0011 Thena_0011 Thena_0011 12278 12784 + MgtE intracellular region InterPro IPR006668~KEGG: tmt:Tmath_1281 MgtE intracellular region~PFAM: Magnesium transporter%2C MgtE intracellular region~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783374~PFAM: MgtE intracellular N domain gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0011 Thena_0012 Thena_0012 Thena_0012 12777 13508 + OmpA/MotB domain protein COGs: COG1360 Flagellar motor protein~InterPro IPR006665~KEGG: mta:Moth_1741 OmpA/MotB~PFAM: Outer membrane protein%2C OmpA/MotB%2C C-terminal~SPTR: OmpA/MotB domain protein%3B~IMG reference gene:2504783375~PFAM: OmpA family gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0012 Thena_0013 Thena_0013 Thena_0013 13533 14012 + flagellar basal body-associated protein FliL COGs: COG1580 Flagellar basal body-associated protein~InterPro IPR005503~KEGG: dak:DaAHT2_1714 flagellar basal body-associated protein FliL~PFAM: Flagellar basal body-associated protein FliL~SPTR: Flagellar basal body-associated protein FliL%3B~IMG reference gene:2504783376~PFAM: Flagellar basal body-associated protein FliL gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0013 Thena_0014 Thena_0014 Thena_0014 14046 14405 + response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789~KEGG: toc:Toce_1111 response regulator receiver protein~PFAM: Signal transduction response regulator%2C receiver region~SMART: Signal transduction response regulator%2C receiver region~SPTR: Response regulator receiver protein%3B~IMG reference gene:2504783377~PFAM: Response regulator receiver domain gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0014 Thena_0015 Thena_0015 Thena_0015 14407 15285 + hypothetical protein IMG reference gene:2504783378~PFAM: Flagellar biosynthesis protein%2C FliO gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0015 Thena_0016 Thena_0016 Thena_0016 15288 16034 + flagellar biosynthetic protein FliP COGs: COG1338 Flagellar biosynthesis pathway component FliP~InterPro IPR005837:IPR005838~KEGG: csc:Csac_1273 flagellar biosynthetic protein FliP~PFAM: Type III secretion system inner membrane P protein~SPTR: Flagellar biosynthetic protein FliP%3B~TIGRFAM: Flagellar transport protein FliP~IMG reference gene:2504783379~PFAM: FliP family~TIGRFAM: flagellar biosynthetic protein FliP gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0016 Thena_0017 Thena_0017 Thena_0017 16047 17078 + response regulator receiver modulated CheB methylesterase COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain~HAMAP: Chemotaxis response regulator protein-glutamate methylesterase~InterPro IPR001789:IPR000673~KEGG: mif:Metin_0773 response regulator receiver modulated CheB methylesterase~PFAM: Signal transduction response regulator%2C chemotaxis%2C protein-glutamate methylesterase%3B Signal transduction response regulator%2C receiver region~PRIAM: Protein-glutamate methylesterase~SMART: Signal transduction response regulator%2C receiver region~SPTR: Response regulator receiver modulated CheB methylesterase%3B~IMG reference gene:2504783380~PFAM: CheB methylesterase%3B Response regulator receiver domain gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0017 Thena_0018 Thena_0018 Thena_0018 17102 17884 + MCP methyltransferase%2C CheR-type COGs: COG1352 Methylase of chemotaxis methyl-accepting protein~InterPro IPR000780~KEGG: cbb:CLD_1825 chemotaxis protein methyltransferase CheR~PFAM: MCP methyltransferase%2C CheR-type~PRIAM: Protein-glutamate O-methyltransferase~SMART: MCP methyltransferase%2C CheR-type~SPTR: Chemotaxis protein methyltransferase%2C CheR%3B~IMG reference gene:2504783381~PFAM: CheR methyltransferase%2C SAM binding domain%3B CheR methyltransferase%2C all-alpha domain gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0018 Thena_0019 Thena_0019 Thena_0019 17894 18502 + CheC%2C inhibitor of MCP methylation COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation~InterPro IPR007597~KEGG: tit:Thit_1208 CheC%2C inhibitor of MCP methylation~PFAM: CheC-like protein~SPTR: CheC-like family protein%3B~IMG reference gene:2504783382~PFAM: CheC-like family gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0019 Thena_0020 Thena_0020 Thena_0020 18504 18974 + CheD COGs: COG1871 Chemotaxis protein%3B stimulates methylation of MCP protein~HAMAP: Chemoreceptor glutamine deamidase cheD~InterPro IPR005659~KEGG: tnp:Tnap_0024 CheD~PFAM: Chemoreceptor glutamine deamidase cheD~PRIAM: Protein-glutamine glutaminase~SPTR: Probable chemoreceptor glutamine deamidase CheD%3B~IMG reference gene:2504783383~PFAM: CheD gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0020 Thena_0021 Thena_0021 Thena_0021 18974 19243 + export protein FliQ family 3 COGs: COG1987 Flagellar biosynthesis pathway component FliQ~InterPro IPR002191~KEGG: cvi:CV_3125 flagellar biosynthetic protein FliQ~PFAM: Bacterial export protein FliQ%2C family 3~SPTR: Flagellar biosynthetic protein FliQ%3B~IMG reference gene:2504783384~PFAM: Bacterial export proteins%2C family 3~TIGRFAM: flagellar biosynthetic protein FliQ gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0021 Thena_0022 Thena_0022 Thena_0022 19240 20010 + flagellar biosynthetic protein FliR COGs: COG1684 Flagellar biosynthesis pathway component FliR~InterPro IPR006303:IPR002010~KEGG: bbe:BBR47_34650 flagellar biosynthesis protein FliR~PFAM: Type III secretion system inner membrane R protein~SPTR: Flagellar biosynthetic protein FliR%3B~TIGRFAM: Flagellar biosynthesis protein FliR~IMG reference gene:2504783385~PFAM: Bacterial export proteins%2C family 1~TIGRFAM: flagellar biosynthetic protein FliR gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0022 Thena_0023 Thena_0023 Thena_0023 19997 21046 + flagellar biosynthetic protein FlhB COGs: COG1377 Flagellar biosynthesis pathway component FlhB~InterPro IPR006136:IPR006135~KEGG: afl:Aflv_1722 flagellar biosynthesis protein FlhB~PFAM: Type III secretion exporter~SPTR: Flagellar biosynthesis pathway%2C component FlhB%3B~TIGRFAM: Flagellar biosynthetic protein FlhB~IMG reference gene:2504783386~PFAM: FlhB HrpN YscU SpaS Family~TIGRFAM: flhB C-terminus-related protein%3B flagellar biosynthetic protein FlhB gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0023 Thena_0024 Thena_0024 Thena_0024 21062 21310 + pseudogene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0024 Thena_0025 Thena_0025 Thena_0025 21369 21629 + hypothetical protein IMG reference gene:2504783388 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0025 Thena_0026 Thena_0026 Thena_0026 21647 22060 + hypothetical protein IMG reference gene:2504783389 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0026 Thena_0027 Thena_0027 Thena_0027 22063 22551 + CheW protein COGs: COG0835 Chemotaxis signal transduction protein~InterPro IPR002545~KEGG: dma:DMR_20770 chemotaxis protein CheW~PFAM: CheW-like protein~SMART: CheW-like protein~SPTR: CheW protein%3B~IMG reference gene:2504783390~PFAM: CheW-like domain gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0027 Thena_0028 Thena_0028 Thena_0028 22561 24609 + CheA signal transduction histidine kinase COGs: COG0643 Chemotaxis protein histidine kinase and related kinase~InterProIPR008207:IPR010808:IPR004105:IPR003594:IPR 002545~KEGG: mta:Moth_0742 CheA signal transduction histidine kinases~PFAM: ATP-binding region%2C ATPase-like%3B Signal transduction histidine kinase%2C P2 response regulator-binding%3B Signal transduction histidine kinase%2C phosphotransfer (Hpt) region%3B Signal transduction histidine kinase%2C subgroup%2C homodimeric%3B CheW-like protein~SMART: Signal transduction histidine kinase%2C phosphotransfer (Hpt) region%3B ATP-binding region%2C ATPase-like%3B CheW-like protein~SPTR: CheA signal transduction histidine kinases%3B~IMG reference gene:2504783391~PFAM: P2 response regulator binding domain%3B CheW-like domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Signal transducing histidine kinase%2C homodimeric domain%3B Hpt domain gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0028 Thena_0029 Thena_0029 Thena_0029 24612 25481 + metal dependent phosphohydrolase COGs: COG1639 signal transduction protein~InterPro IPR006675:IPR013976:IPR003607~KEGG: cbi:CLJ_B1646 HDIG domain protein~PFAM: Metal-dependent hydrolase HDOD~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: HDIG domain protein%3B~TIGRFAM: HDIG~IMG reference gene:2504783392~PFAM: HDOD domain~TIGRFAM: uncharacterized domain HDIG gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0029 Thena_0030 Thena_0030 Thena_0030 25481 25885 + flagellar basal-body rod protein FlgB COGs: COG1815 Flagellar basal body protein~InterPro IPR006300:IPR001444~KEGG: chd:Calhy_0580 flagellar basal-body rod protein FlgB~PFAM: Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar basal-body rod protein FlgB%3B~TIGRFAM: Flagellar basal-body rod protein FlgB~IMG reference gene:2504783393~PFAM: Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgB gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0030 Thena_0031 Thena_0031 Thena_0031 25937 26599 + Lytic transglycosylase catalytic COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains)~InterPro IPR008258~KEGG: tte:TTE0883 lytic murein transglycosylase~PFAM: Lytic transglycosylase-like%2C catalytic~SPTR: Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains)%3B~IMG reference gene:2504783394~PFAM: Transglycosylase SLT domain gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0031 Thena_0032 Thena_0032 Thena_0032 26618 28597 + diguanylate cyclase with PAS/PAC sensor COGs: COG2199 FOG: GGDEF domain~InterPro IPR000014:IPR000160:IPR004010:IPR013767~KEGG: has:Halsa_0861 diguanylate cyclase and metal dependent phosphohydrolase~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold%3B Cache~SMART: Diguanylate cyclase%2C predicted%3B PAS~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504783395~PFAM: Cache domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0032 Thena_0033 Thena_0033 Thena_0033 28594 29736 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: ckr:CKR_1945 hypothetical protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783396~PFAM: Major Facilitator Superfamily gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0033 Thena_0034 Thena_0034 Thena_0034 29919 30629 + MORN repeat-containing protein COGs: COG4642 conserved hypothetical protein~InterPro IPR003409~KEGG: ptm:GSPATT00005032001 hypothetical protein~PFAM: MORN motif~SMART: MORN motif~SPTR: Chromosome undetermined scaffold_11%2C whole genome shotgun sequence%3B~IMG reference gene:2504783397~PFAM: MORN repeat gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0034 Thena_0035 Thena_0035 Thena_0035 30778 31524 + Cobyrinic acid ac-diamide synthase COGs: COG3640 CO dehydrogenase maturation factor~InterPro IPR002586~KEGG: dba:Dbac_0933 cobyrinic acid ac-diamide synthase~PFAM: Cobyrinic acid a%2Cc-diamide synthase~SPTR: Cobyrinic acid ac-diamide synthase%3B~IMG reference gene:2504783398~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0035 Thena_0036 Thena_0036 Thena_0036 31526 33409 + carbon-monoxide dehydrogenase%2C catalytic subunit COGs: COG1151 6Fe-6S prismane cluster-containing protein~InterPro IPR010047:IPR004137~KEGG: drt:Dret_1234 carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane~PRIAM: Carbon-monoxide dehydrogenase (acceptor)~SPTR: Carbon-monoxide dehydrogenase%2C catalytic subunit%3B~TIGRFAM: Carbon-monoxide dehydrogenase%2C catalytic subunit~IMG reference gene:2504783399~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0036 Thena_0037 Thena_0037 Thena_0037 33495 33926 + MOSC domain containing protein COGs: COG2258 conserved hypothetical protein~InterPro IPR005302~KEGG: tye:THEYE_A1201 MOSC domain protein~PFAM: Molybdenum cofactor sulfurase%2C C-terminal~SPTR: Mosc domain protein%3B~IMG reference gene:2504783400~PFAM: MOSC domain gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0037 Thena_0038 Thena_0038 Thena_0038 33947 35569 + Adenine deaminase COGs: COG1001 Adenine deaminase~HAMAP: Adenine deaminase~InterPro IPR006680~KEGG: mba:Mbar_A3342 adenine deaminase~PFAM: Amidohydrolase 1~PRIAM: Adenine deaminase~SPTR: Adenine deaminase%3B~IMG reference gene:2504783401~PFAM: Amidohydrolase family~TIGRFAM: adenine deaminase gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0038 Thena_0039 Thena_0039 Thena_0039 35562 36416 - hypothetical protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: mpd:MCP_0356 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783402~PFAM: Metallo-beta-lactamase superfamily gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0039 Thena_0040 Thena_0040 Thena_0040 36506 37066 + MORN repeat-containing protein InterPro IPR003409~KEGG: tet:TTHERM_00637110 Protein kinase domain containing protein~PFAM: MORN motif~SMART: MORN motif~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783403~PFAM: MORN repeat gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0040 Thena_0041 Thena_0041 Thena_0041 37114 37950 - hypothetical protein IMG reference gene:2504783404 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0041 Thena_0042 Thena_0042 Thena_0042 38118 39416 + major facilitator superfamily MFS_1 COGs: COG2271 Sugar phosphate permease~InterPro IPR011701~KEGG: clj:CLJU_c14820 major facilitator family transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504783405~PFAM: Major Facilitator Superfamily gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0042 Thena_0043 Thena_0043 Thena_0043 39535 39822 + 10 kDa chaperonin COGs: COG0234 Co-chaperonin GroES (HSP10)~HAMAP: Chaperonin Cpn10%2C subgroup~InterPro IPR001476:IPR020818~KEGG: dth:DICTH_0814 co-chaperonin GroES~PFAM: Chaperonin Cpn10~SPTR: 10 kDa chaperonin 1%3B~IMG reference gene:2504783406~PFAM: Chaperonin 10 Kd subunit gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0043 Thena_0044 Thena_0044 Thena_0044 39838 41472 + 60 kDa chaperonin COGs: COG0459 Chaperonin GroEL (HSP60 family)~HAMAP: 60 kDa chaperonin~InterPro IPR001844:IPR002423~KEGG: mta:Moth_0546 chaperonin GroEL~PFAM: Chaperonin Cpn60/TCP-1~SPTR: 60 kDa chaperonin 1%3B~TIGRFAM: Chaperonin Cpn60~IMG reference gene:2504783407~PFAM: TCP-1/cpn60 chaperonin family~TIGRFAM: chaperonin GroL gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0044 Thena_0045 Thena_0045 Thena_0045 41674 43860 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR003660:IPR004089~KEGG: dma:DMR_07730 methyl-accepting chemotaxis protein~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~IMG reference gene:2504783408~PFAM: HAMP domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0045 Thena_0046 Thena_0046 Thena_0046 43899 44384 - methylated-DNA/protein-cysteinemethyltransferase COGs: COG0350 Methylated DNA-protein cysteine methyltransferase~InterPro IPR014048~KEGG: cdf:CD1770 methylated-DNA--protein-cysteine methyltransferase 2~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase%2C DNA binding~SPTR: Methylated-DNA--[protein]-cysteine S-methyltransferase%3B~TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase%2C DNA binding~IMG reference gene:2504783409~PFAM: 6-O-methylguanine DNA methyltransferase%2C DNA binding domain~TIGRFAM: O-6-methylguanine DNA methyltransferase gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0046 Thena_0047 Thena_0047 Thena_0047 44381 45037 - hypothetical protein IMG reference gene:2504783410 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0047 Thena_0048 Thena_0048 Thena_0048 45061 45786 - beta-lactamase domain-containing protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: vdi:Vdis_0557 beta-lactamase domain-containing protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504783411~PFAM: Metallo-beta-lactamase superfamily gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0048 Thena_0049 Thena_0049 Thena_0049 45889 47481 + Gamma-glutamyltransferase COGs: COG0405 Gamma-glutamyltransferase~InterPro IPR000101~KEGG: pmo:Pmob_0926 gamma-glutamyltransferase~PFAM: Gamma-glutamyltranspeptidase~PRIAM: Gamma-glutamyltransferase~SPTR: Gamma-glutamyltransferase%3B~IMG reference gene:2504783412~PFAM: Gamma-glutamyltranspeptidase~TIGRFAM: gamma-glutamyltranspeptidase gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0049 Thena_0050 Thena_0050 Thena_0050 47472 49766 + D-lactate dehydrogenase (cytochrome) COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094:IPR004113~KEGG: dps:DP0059 glycolate oxidase subunit (GlcD)~PFAM: FAD-linked oxidase%2C C-terminal%3B FAD linked oxidase%2C N-terminal~PRIAM: D-lactate dehydrogenase (cytochrome)~SPTR: Glycolate oxidase subunit glcD%3B~IMG reference gene:2504783413~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain~TIGRFAM: glycolate oxidase%2C subunit GlcD gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0050 Thena_0051 Thena_0051 Thena_0051 49827 50465 + peroxiredoxin COGs: COG0450 Peroxiredoxin~HAMAP: peroxiredoxin~InterPro IPR000866:IPR019479~KEGG: tye:THEYE_A1053 probable peroxiredoxin 2~PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Peroxiredoxin%2C C-terminal~PRIAM: Peroxiredoxin~SPTR: Probable peroxiredoxin%3B~IMG reference gene:2504783414~PFAM: C-terminal domain of 1-Cys peroxiredoxin%3B AhpC/TSA family gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0051 Thena_0052 Thena_0052 Thena_0052 50595 51698 + hypothetical protein KEGG: cyj:Cyan7822_1889 acyltransferase 3~SPTR: Acyltransferase 3%3B~IMG reference gene:2504783415~PFAM: Acyltransferase family gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0052 Thena_0053 Thena_0053 Thena_0053 51767 52849 + glucose-1-phosphate thymidyltransferase COGs: COG1209 dTDP-glucose pyrophosphorylase~InterPro IPR005908:IPR005835~KEGG: chy:CHY_0976 glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase~PRIAM: Glucose-1-phosphate thymidylyltransferase~SPTR: Glucose-1-phosphate thymidylyltransferase%3B~TIGRFAM: Glucose-1-phosphate thymidylyltransferase%2C short form~IMG reference gene:2504783416~PFAM: Nucleotidyl transferase~TIGRFAM: glucose-1-phosphate thymidylylransferase%2C long form gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0053 Thena_0054 Thena_0054 Thena_0054 52850 53683 + dTDP-4-dehydrorhamnose reductase COGs: COG1091 dTDP-4-dehydrorhamnose reductase~InterPro IPR005913~KEGG: trq:TRQ2_0306 dTDP-4-dehydrorhamnose reductase~PFAM: dTDP-4-dehydrorhamnose reductase~PRIAM: dTDP-4-dehydrorhamnose reductase~SPTR: Putative dTDP-4-dehydrorhamnose reductase%3B~TIGRFAM: dTDP-4-dehydrorhamnose reductase~IMG reference gene:2504783417~PFAM: RmlD substrate binding domain~TIGRFAM: dTDP-4-dehydrorhamnose reductase gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0054 Thena_0055 Thena_0055 Thena_0055 53730 55451 + surface antigen (D15) COGs: COG4775 Outer membrane protein/protective antigen OMA87~InterPro IPR010827:IPR000184~KEGG: aar:Acear_2201 surface antigen (D15)~PFAM: Bacterial surface antigen (D15)%3B Surface antigen variable number~SPTR: Surface antigen (D15)%3B~IMG reference gene:2504783418~PFAM: Surface antigen variable number repeat%3B Surface antigen~TIGRFAM: outer membrane protein assembly complex%2C YaeT protein gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0055 Thena_0056 Thena_0056 Thena_0056 55509 55985 + outer membrane chaperone Skp (OmpH) InterPro IPR005632~KEGG: dth:DICTH_0659 cationic outer membrane protein%2C putative~PFAM: Outer membrane chaperone Skp (OmpH)~SPTR: Cationic outer membrane protein%2C putative%3B~IMG reference gene:2504783419~PFAM: Outer membrane protein (OmpH-like)%3B Borrelia burgdorferi REV protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0056 Thena_0057 Thena_0057 Thena_0057 55975 57015 + UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl)~HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~InterPro IPR007691:IPR020573:IPR001451~KEGG: min:Minf_0748 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase%2C non-repeat region%3B Bacterial transferase hexapeptide repeat~SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase%3B~TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~IMG reference gene:2504783420~PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase%2C LpxD%3B Bacterial transferase hexapeptide (three repeats)~TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0057 Thena_0058 Thena_0058 Thena_0058 57062 57526 + hypothetical protein IMG reference gene:2504783421 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0058 Thena_0059 Thena_0059 Thena_0059 57580 58308 + UDP-3-0-acyl N-acetylglucosamine deacetylase COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase~InterPro IPR004463~KEGG: sat:SYN_00756 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase~SPTR: UDP-3-0-acyl N-acetylglucosamine deacetylase%3B~IMG reference gene:2504783422~PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0059 Thena_0060 Thena_0060 Thena_0060 58345 58770 + (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehydratase COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase~HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase~InterPro IPR010084:IPR013114~KEGG: afn:Acfer_1689 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase%2C FabA/FabZ~SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ%3B~TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~IMG reference gene:2504783423~PFAM: FabA-like domain~TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0060 Thena_0061 Thena_0061 Thena_0061 58772 59557 + acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase COGs: COG1043 Acyl-(acyl carrier protein)~InterPro IPR010137:IPR001451~KEGG: dth:DICTH_0664 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase~PFAM: Bacterial transferase hexapeptide repeat~PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase~SPTR:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluco samineO-acyltransferase%3B~TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase~IMG reference gene:2504783424~PFAM: Bacterial transferase hexapeptide (three repeats)~TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0061 Thena_0062 Thena_0062 Thena_0062 59541 60359 + 2-dehydro-3-deoxyphosphooctonate aldolase COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase~HAMAP: 3-deoxy-8-phosphooctulonate synthase~InterPro IPR006269:IPR006218~KEGG: tye:THEYE_A1729 2-dehydro-3-deoxyphosphooctonate aldolase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-8-phosphooctulonate synthase~SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase%3B~TIGRFAM: 3-deoxy-8-phosphooctulonate synthase~IMG reference gene:2504783425~PFAM: DAHP synthetase I family~TIGRFAM: 3-deoxy-8-phosphooctulonate synthase%3B phospho-2-dehydro-3-deoxyheptonate aldolase gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0062 Thena_0063 Thena_0063 Thena_0063 60390 61361 + KpsF/GutQ family protein COGs: COG0794 sugar phosphate isomerase involved in capsule formation~InterPro IPR004800:IPR001347:IPR000644~KEGG: aar:Acear_2183 KpsF/GutQ family protein~PFAM: Sugar isomerase (SIS)%3B Cystathionine beta-synthase%2C core~PRIAM: Arabinose-5-phosphate isomerase~SMART: Cystathionine beta-synthase%2C core~SPTR: KpsF/GutQ family protein%3B~TIGRFAM: KpsF/GutQ~IMG reference gene:2504783426~PFAM: CBS domain%3B SIS domain~TIGRFAM: KpsF/GutQ family protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0063 Thena_0064 Thena_0064 Thena_0064 61428 61952 + 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family COGs: COG1778 Low specificity phosphatase (HAD superfamily)~InterPro IPR010023:IPR006549~KEGG: rsd:TGRD_428 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase~SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%3B~TIGRFAM: Phosphatase KdsC%3B HAD-superfamily hydrolase%2C subfamily IIIA~IMG reference gene:2504783427~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0064 Thena_0065 Thena_0065 Thena_0065 61955 62452 + hypothetical protein IMG reference gene:2504783428 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0065 Thena_0066 Thena_0066 Thena_0066 62471 63652 - Cyclopropane-fatty-acyl-phospholipid synthase COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase~InterPro IPR003333~KEGG: cbe:Cbei_5003 cyclopropane-fatty-acyl-phospholipid synthase~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase~PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase~SPTR: Cyclopropane-fatty-acyl-phospholipid synthase%3B~IMG reference gene:2504783429~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0066 Thena_0067 Thena_0067 Thena_0067 63752 64645 + protein of unknown function DUF81 COGs: COG0730 permease~InterPro IPR002781~KEGG: tye:THEYE_A0940 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Membrane protein%2C putative%3B~IMG reference gene:2504783430~PFAM: Sulfite exporter TauE/SafE gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0067 Thena_0068 Thena_0068 Thena_0068 64635 65345 - MgtC/SapB transporter COGs: COG1285 membrane protein~InterPro IPR003416~KEGG: geo:Geob_2390 MgtC/SapB transporter~PFAM: MgtC/SapB transporter~SPTR: MgtC/SapB transporter%3B~IMG reference gene:2504783431~PFAM: MgtC family gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0068 Thena_0069 Thena_0069 Thena_0069 65366 65965 - hypothetical protein SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783432 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0069 Thena_0070 Thena_0070 Thena_0070 66137 66748 + Peroxiredoxin COGs: COG0450 Peroxiredoxin~InterPro IPR000866:IPR019479~KEGG: cst:CLOST_2406 peroxiredoxin~PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Peroxiredoxin%2C C-terminal~PRIAM: Peroxiredoxin~SPTR: Putative peroxiredoxin%3B~IMG reference gene:2504783433~PFAM: C-terminal domain of 1-Cys peroxiredoxin%3B AhpC/TSA family gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0070 Thena_0071 Thena_0071 Thena_0071 66751 69132 + peptidase S16 lon domain protein COGs: COG1067 ATP-dependent protease~InterPro IPR008269~KEGG: tye:THEYE_A1753 ATP-dependent protease La~PFAM: Peptidase S16%2C lon C-terminal~SPTR: ATP-dependent protease La%3B~IMG reference gene:2504783434~PFAM: Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: lon-related putative ATP-dependent protease gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0071 Thena_0072 Thena_0072 Thena_0072 69379 69996 + protein of unknown function DUF996 InterPro IPR010397~KEGG: mfs:MFS40622_0917 protein of unknown function DUF996~PFAM: Protein of unknown function DUF996~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783435~PFAM: Protein of unknown function (DUF996) gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0072 Thena_0073 Thena_0073 Thena_0073 70100 70618 + hypothetical protein KEGG: tal:Thal_1393 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783436 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0073 Thena_0074 Thena_0074 Thena_0074 70625 71755 + hypothetical protein KEGG: tal:Thal_1395 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783437 gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0074 Thena_0075 Thena_0075 Thena_0075 71901 73085 + hypothetical protein KEGG: ppd:Ppro_2370 Ig family protein~SPTR: Ig family protein%3B~IMG reference gene:2504783438 gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0075 Thena_0076 Thena_0076 Thena_0076 73173 73832 + hypothetical protein KEGG: tal:Thal_1393 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783439 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0076 Thena_0077 Thena_0077 Thena_0077 73839 74957 + hypothetical protein KEGG: tal:Thal_1395 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783440 gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0077 Thena_0078 Thena_0078 Thena_0078 75104 76324 + hypothetical protein KEGG: ddf:DEFDS_0281 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783441 gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0078 Thena_0079 Thena_0079 Thena_0079 76311 77084 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: ddf:DEFDS_0282 transposase IS21 family~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: Transposase%2C IS21 family%3B~IMG reference gene:2504783442~PFAM: IstB-like ATP binding protein gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0079 Thena_0080 Thena_0080 Thena_0080 77164 78213 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: dap:Dacet_0760 integrase catalytic region~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~IMG reference gene:2504783443~PFAM: Integrase core domain gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0080 Thena_0081 Thena_0081 Thena_0081 78206 78982 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: IstB domain protein ATP-binding protein%3B~IMG reference gene:2504783444~PFAM: IstB-like ATP binding protein gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0081 Thena_0082 Thena_0082 Thena_0082 79037 79351 + pseudogene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0082 Thena_0083 Thena_0083 Thena_0083 79439 80098 + hypothetical protein KEGG: tal:Thal_1393 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783446 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0083 Thena_0084 Thena_0084 Thena_0084 80105 84391 + Hemolysin-type calcium-binding region InterPro IPR001343~KEGG: tal:Thal_1395 hypothetical protein~PFAM: Haemolysin-type calcium-binding region~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783447~PFAM: Hemolysin-type calcium-binding repeat (2 copies) gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0084 Thena_0085 Thena_0085 Thena_0085 84422 85753 + outer membrane efflux protein COGs: COG1538 Outer membrane protein~InterPro IPR003423~KEGG: sdl:Sdel_0985 outer membrane efflux protein~PFAM: Outer membrane efflux protein~SPTR: Outer membrane efflux protein%3B~IMG reference gene:2504783448~PFAM: Outer membrane efflux protein gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0085 Thena_0086 Thena_0086 Thena_0086 85756 87861 + type I secretion system ATPase COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain~InterProIPR010132:IPR005074:IPR001140:IPR003439:IPR 003593~KEGG: sdl:Sdel_0984 type I secretion system ATPase~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane region%3B Peptidase C39%2C bacteriocin processing~PRIAM: Peptide-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Type I secretion system ATPase%3B~TIGRFAM: ATPase%2C type I secretion system%2C HlyB~IMG reference gene:2504783449~PFAM: ABC transporter transmembrane region%3B ABC transporter%3B Peptidase C39 family~TIGRFAM: type I secretion system ABC transporter%2C HlyB family gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0086 Thena_0087 Thena_0087 Thena_0087 87883 89181 + type I secretion membrane fusion protein%2C HlyD family COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR010129:IPR006143~KEGG: sku:Sulku_1199 type I secretion membrane fusion protein%2C HlyD family~PFAM: Secretion protein HlyD~SPTR: Type I secretion membrane fusion protein%2C HlyD family%3B~TIGRFAM: Type I secretion membrane fusion protein%2C HlyD~IMG reference gene:2504783450~PFAM: HlyD family secretion protein~TIGRFAM: type I secretion membrane fusion protein%2C HlyD family gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0087 Thena_0088 Thena_0088 Thena_0088 89212 90687 - polyphosphate:AMP phosphotransferase COGs: COG2326 conserved hypothetical protein~InterPro IPR005660~KEGG: csh:Closa_0956 protein of unknown function DUF344~PFAM: Polyphosphate kinase 2~SPTR: Putative uncharacterized protein%3B~TIGRFAM: polyphosphate:AMP phosphotransferase~IMG reference gene:2504783451~PFAM: Polyphosphate kinase 2 (PPK2)~TIGRFAM: polyphosphate:AMP phosphotransferase gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0088 Thena_0089 Thena_0089 Thena_0089 90825 93260 - peptidase U32 COGs: COG0826 Collagenase and related protease~InterPro IPR001539~KEGG: tjr:TherJR_1866 peptidase U32~PFAM: Peptidase U32~SPTR: Peptidase U32%3B~IMG reference gene:2504783452~PFAM: Collagenase%3B Peptidase family U32 gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0089 Thena_0090 Thena_0090 Thena_0090 93314 96964 - SMC domain protein COGs: COG0419 ATPase involved in DNA repair~InterPro IPR003395~KEGG: mhu:Mhun_2080 exonuclease SbcC~PFAM: RecF/RecN/SMC protein%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783453~TIGRFAM: exonuclease SbcC gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0090 Thena_0091 Thena_0091 Thena_0091 96951 98204 - nuclease SbcCD%2C D subunit COGs: COG0420 DNA repair exonuclease~InterPro IPR004593:IPR004843~KEGG: nmu:Nmul_A0203 nuclease SbcCD%2C D subunit~PFAM: Metallophosphoesterase~SPTR: Exodeoxyribonuclease I subunit D%3B~TIGRFAM: Exonuclease SbcD~IMG reference gene:2504783454~PFAM: Calcineurin-like phosphoesterase%3B Type 5 capsule protein repressor C terminal~TIGRFAM: exonuclease SbcD gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0091 Thena_0092 Thena_0092 Thena_0092 98246 99262 - TQO small subunit DoxD domain-containing protein InterPro IPR007301:IPR011636~KEGG: bfs:BF2693 hypothetical protein~PFAM: TQO small subunit DoxD%3B TQO small subunit DoxA~SPTR: Quinol oxidase subunit%3B~IMG reference gene:2504783455~PFAM: TQO small subunit DoxA%3B TQO small subunit DoxD gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0092 Thena_0093 Thena_0093 Thena_0093 100163 103744 + nitrate reductase%2C alpha subunit COGs: COG5013 Nitrate reductase alpha subunit~InterPro IPR006468:IPR006656:IPR006657~KEGG: aeh:Mlg_1003 respiratory nitrate reductase alpha subunit apoprotein~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide-binding region~PRIAM: Nitrate reductase~SPTR: Nitrate reductase%2C alpha subunit%3B~TIGRFAM: Nitrate reductase%2C alpha subunit~IMG reference gene:2504783456~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain~TIGRFAM: respiratory nitrate reductase%2C alpha subunit gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0093 Thena_0094 Thena_0094 Thena_0094 103741 105177 + nitrate reductase%2C beta subunit COGs: COG1140 Nitrate reductase beta subunit~InterPro IPR006547~KEGG: rme:Rmet_2075 respiratory nitrate reductase subunit beta~PRIAM: Nitrate reductase~SPTR: Nitrate reductase 1%2C beta (Fe-S) subunit%3B~TIGRFAM: Nitrate reductase%2C beta subunit~IMG reference gene:2504783457~TIGRFAM: nitrate reductase%2C beta subunit gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0094 Thena_0095 Thena_0095 Thena_0095 105180 106481 + major facilitator superfamily MFS_1 COGs: COG2223 Nitrate/nitrite transporter~InterPro IPR011701~KEGG: clj:CLJU_c23740 putative permease~PFAM: Major facilitator superfamily MFS-1~SPTR: Predicted permease%3B~IMG reference gene:2504783458~PFAM: Major Facilitator Superfamily gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0095 Thena_0096 Thena_0096 Thena_0096 106488 106997 + nitrate reductase molybdenum cofactor assembly chaperone COGs: COG2180 Nitrate reductase delta subunit~InterPro IPR003765~KEGG: har:HEAR1660 respiratory nitrate reductase subunit delta~PFAM: Nitrate reductase%2C delta subunit~SPTR: Nitrate reductase molybdenum cofactor assembly chaperone%3B~TIGRFAM: Nitrate reductase%2C delta subunit~IMG reference gene:2504783459~PFAM: Nitrate reductase delta subunit~TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0096 Thena_0097 Thena_0097 Thena_0097 106984 107673 + respiratory nitrate reductase%2C gamma subunit COGs: COG2181 Nitrate reductase gamma subunit~InterPro IPR003816~KEGG: bpt:Bpet3824 nitrate reductase gamma chain~PFAM: Nitrate reductase%2C gamma subunit~PRIAM: Nitrate reductase~SPTR: Respiratory nitrate reductase%2C gamma subunit%3B~TIGRFAM: Nitrate reductase%2C gamma subunit~IMG reference gene:2504783460~PFAM: Nitrate reductase gamma subunit~TIGRFAM: respiratory nitrate reductase%2C gamma subunit gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0097 Thena_0098 Thena_0098 Thena_0098 107692 108864 + beta-lactamase domain-containing protein COGs: COG0426 flavoprotein~KEGG: mem:Memar_1933 beta-lactamase domain-containing protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504783461~PFAM: Metallo-beta-lactamase superfamily gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0098 Thena_0099 Thena_0099 Thena_0099 108876 109049 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: fpl:Ferp_0138 4Fe-4S ferredoxin iron-sulfur binding domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504783462 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0099 Thena_0100 Thena_0100 Thena_0100 109178 109906 + protein of unknown function DUF364 InterPro IPR007161~KEGG: cbl:CLK_0406 hypothetical protein~PFAM: Protein of unknown function DUF364~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783463~PFAM: Domain of unknown function (DUF364) gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0100 Thena_0101 Thena_0101 Thena_0101 110030 111148 + Choloylglycine hydrolase COGs: COG3049 Penicillin V acylase and related amidase~InterPro IPR003199~KEGG: str:Sterm_3501 choloylglycine hydrolase~PFAM: Choloylglycine hydrolase~SPTR: Choloylglycine hydrolase%3B~IMG reference gene:2504783464~PFAM: Linear amide C-N hydrolases%2C choloylglycine hydrolase family gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0101 Thena_0102 Thena_0102 Thena_0102 111261 112016 + Methyltransferase type 11 COGs: COG4106 Trans-aconitate methyltransferase~InterPro IPR013216~KEGG: gmc:GY4MC1_0854 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: Methyltransferase type 11%3B~IMG reference gene:2504783465~PFAM: Methyltransferase domain gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0102 Thena_0103 Thena_0103 Thena_0103 112036 112146 + hypothetical protein IMG reference gene:2504783466 gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0103 Thena_0104 Thena_0104 Thena_0104 112298 113113 + Electron transfer flavoprotein alpha/beta-subunit COGs: COG2086 Electron transfer flavoprotein beta subunit~InterPro IPR014730~KEGG: clj:CLJU_c40230 putative electron transfer flavoprotein subunit beta~PFAM: Electron transfer flavoprotein%2C alpha/beta-subunit%2C N-terminal~SPTR: Predicted electron transfer flavoprotein beta subunit%3B~IMG reference gene:2504783467~PFAM: Electron transfer flavoprotein domain gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0104 Thena_0105 Thena_0105 Thena_0105 113125 114156 + Electron transfer flavoprotein alpha subunit COGs: COG2025 Electron transfer flavoprotein alpha subunit~InterPro IPR014730:IPR014731~KEGG: chy:CHY_2477 electron transfer flavoprotein subunit alpha~PFAM: Electron transfer flavoprotein%2C alpha subunit%2C C-terminal%3B Electron transfer flavoprotein%2C alpha/beta-subunit%2C N-terminal~SPTR: Electron transfer flavoprotein%2C alpha subunit%3B~IMG reference gene:2504783468~PFAM: Electron transfer flavoprotein domain%3B Electron transfer flavoprotein FAD-binding domain gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0105 Thena_0106 Thena_0106 Thena_0106 114153 115454 + Electron-transferring-flavoproteindehydrogenase COGs: COG0644 Dehydrogenase (flavoprotein)~InterPro IPR002922~KEGG: chy:CHY_2476 FixC protein~PFAM: Thiamine biosynthesis Thi4 protein~PRIAM: Electron-transferring-flavoprotein dehydrogenase~SPTR: Electron transfer flavoprotein dehydrogenase%3B~IMG reference gene:2504783469~PFAM: Thi4 family gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0106 Thena_0107 Thena_0107 Thena_0107 115451 115726 + iron-sulfur cluster-binding protein FixX COGs: COG2440 Ferredoxin-like protein~KEGG: chy:CHY_2475 iron-sulfur cluster-binding protein FixX~SPTR: Iron-sulfur cluster-binding protein FixX%3B~IMG reference gene:2504783470 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0107 Thena_0108 Thena_0108 Thena_0108 115856 117616 + Butyrate--CoA ligase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR000873~KEGG: pfs:PFLU2290 putative acetyl-CoA synthetase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Butyrate--CoA ligase~SPTR: Putative acetyl-CoA synthetase%3B~IMG reference gene:2504783471~PFAM: AMP-binding enzyme gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0108 Thena_0109 Thena_0109 Thena_0109 117688 117831 - SpoVT / AbrB like domain protein KEGG: tye:THEYE_A1966 SpoVT / AbrB like domain protein~IMG reference gene:2504783472 gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0109 Thena_0110 Thena_0110 Thena_0110 117956 118213 + redox-active disulfide protein 2 InterPro IPR005243~KEGG: ckr:CKR_1590 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Redox-active disulphide protein 2~IMG reference gene:2504783473~TIGRFAM: small redox-active disulfide protein 2 gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0110 Thena_0111 Thena_0111 Thena_0111 118222 119196 + Protein of unknown function DUF318%2C transmembrane COGs: COG0701 permease~InterPro IPR005524~KEGG: clj:CLJU_c29540 putative permease~PFAM: Protein of unknown function DUF318%2C transmembrane~SPTR: Permease%3B~IMG reference gene:2504783474~PFAM: Predicted permease gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0111 Thena_0112 Thena_0112 Thena_0112 119200 119907 - Uncharacterized protein family UPF0066 COGs: COG1720 conserved hypothetical protein~InterPro IPR001378~KEGG: rci:RCIX1646 hypothetical protein~PFAM: Uncharacterised protein family UPF0066~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0066~IMG reference gene:2504783475~PFAM: Uncharacterised protein family UPF0066~TIGRFAM: putative methyltransferase%2C YaeB/AF_0241 family gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0112 Thena_0113 Thena_0113 Thena_0113 120261 121628 - Integrase catalytic region InterPro IPR001584~KEGG: dau:Daud_1501 integrase catalytic subunit~PFAM: Integrase%2C catalytic core~SPTR: Integrase%2C catalytic region%3B~IMG reference gene:2504783479~PFAM: Integrase core domain gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0113 Thena_0114 Thena_0114 Thena_0114 122129 126682 + Glutamate synthase (ferredoxin) COGs: COG0069 Glutamate synthase domain 2~InterPro IPR000583:IPR006982:IPR002932:IPR002489~KEGG: pth:PTH_0734 glutamate synthase domain-containing 2~PFAM: Glutamate synthase%2C central-C%3B Glutamine amidotransferase%2C class-II%3B Glutamate synthase%2C central-N%3B Glutamate synthase%2C alpha subunit%2C C-terminal~PRIAM: Glutamate synthase (ferredoxin)~SPTR: Glutamate synthase domain 2%3B~IMG reference gene:2504783480~PFAM: Conserved region in glutamate synthase%3B GXGXG motif%3B Glutamate synthase central domain%3B Glutamine amidotransferases class-II gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0114 Thena_0115 Thena_0115 Thena_0115 126703 128169 + glutamate synthase%2C NADH/NADPH%2C small subunit COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase~InterPro IPR006005:IPR013027~KEGG: hmo:HM1_1039 glutamate synthase (nadph) small chain~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Glutamate synthase (NADH)~SPTR: Glutamate synthase%2C NADH/NADPH%2C small subunit%3B~TIGRFAM: Glutamate synthase%2C NADH/NADPH%2C small subunit 1~IMG reference gene:2504783481~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: glutamate synthases%2C NADH/NADPH%2C small subunit gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0115 Thena_0116 Thena_0116 Thena_0116 128263 128832 + Elongation factor P COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)~HAMAP: Translation elongation factor P~InterPro IPR011768:IPR013185:IPR001059:IPR015365~KEGG: tjr:TherJR_1731 translation elongation factor P~PFAM: Elongation factor P%2C C-terminal%3B Translation elongation factor%2C KOW-like%3B Translation elongation factor P/YeiP%2C central~SPTR: Elongation factor P%3B~TIGRFAM: Translation elongation factor P~IMG reference gene:2504783482~PFAM: Elongation factor P%2C C-terminal%3B Elongation factor P (EF-P) KOW-like domain%3B Elongation factor P (EF-P) OB domain~TIGRFAM: translation elongation factor P gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0116 Thena_0117 Thena_0117 Thena_0117 128829 129293 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein COGs: COG0511 Biotin carboxyl carrier protein~InterPro IPR001249:IPR000089~KEGG: adg:Adeg_1284 pyruvate carboxylase subunit B~PFAM: Biotin/lipoyl attachment~SPTR: Oxaloacetate decarboxylase alpha subunit%3B~TIGRFAM: Acetyl-CoA biotin carboxyl carrier~IMG reference gene:2504783483~PFAM: Biotin-requiring enzyme~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0117 Thena_0118 Thena_0118 Thena_0118 129383 130726 + acetyl-CoA carboxylase%2C biotin carboxylase COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit~InterPro IPR004549:IPR005481:IPR005479:IPR005482~KEGG: chy:CHY_1998 acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Biotin carboxylase%2C C-terminal~PRIAM: Pyruvate carboxylase~SPTR: Acetyl-CoA carboxylase%2C biotin carboxylase%3B~TIGRFAM: Acetyl-CoA carboxylase%2C biotin carboxylase~IMG reference gene:2504783484~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B Biotin carboxylase C-terminal domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase subunit gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0118 Thena_0119 Thena_0119 Thena_0119 130723 131127 + NusB antitermination factor COGs: COG0781 Transcription termination factor~HAMAP: N utilization substance protein B-like protein~InterPro IPR011605:IPR006027~KEGG: toc:Toce_1311 NusB antitermination factor~PFAM: NusB/RsmB/TIM44~SPTR: N utilization substance protein B homolog%3B~TIGRFAM: NusB antitermination factor~IMG reference gene:2504783485~PFAM: NusB family~TIGRFAM: transcription antitermination factor NusB gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0119 Thena_0120 Thena_0120 Thena_0120 131191 131952 + Imidazole glycerol phosphate synthase subunit hisF COGs: COG0107 Imidazoleglycerol-phosphate synthase~HAMAP: Imidazole glycerol phosphate synthase subunit hisF~InterPro IPR004651:IPR006062~KEGG: aae:aq_181 imidazole glycerol phosphate synthase subunit HisF~PFAM: Histidine biosynthesis~PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase~SPTR: Imidazole glycerol phosphate synthase subunit hisF%3B~TIGRFAM: Histidine biosynthesis%2C HisF~IMG reference gene:2504783486~PFAM: Histidine biosynthesis protein~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0120 Thena_0121 Thena_0121 Thena_0121 131964 133256 + adenylosuccinate lyase COGs: COG0015 Adenylosuccinate lyase~InterPro IPR004769:IPR000362:IPR019468~KEGG: adg:Adeg_0307 adenylosuccinate lyase~PFAM: Fumarate lyase%3B Adenylosuccinate lyase%2C C-terminal~SPTR: Adenylosuccinate lyase%3B~TIGRFAM: Adenylosuccinate lyase~IMG reference gene:2504783487~PFAM: Lyase%3B Adenylosuccinate lyase C-terminus~TIGRFAM: adenylosuccinate lyase gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0121 Thena_0122 Thena_0122 Thena_0122 133283 133978 + Phosphoribosylaminoimidazole-succinocarboxamide synthase COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase~HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase~InterPro IPR001636~KEGG: phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase~PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase~SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase%3B~TIGRFAM: SAICAR synthetase~IMG reference gene:2504783488~PFAM: SAICAR synthetase~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0122 Thena_0123 Thena_0123 Thena_0123 133988 134818 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase COGs: COG0761 Penicillin tolerance protein~HAMAP: LytB protein~InterPro IPR003451~KEGG: adg:Adeg_1146 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein~PFAM: LytB protein~PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~SPTR: Hydroxymethylbutenyl pyrophosphate reductase%3B~TIGRFAM: LytB protein~IMG reference gene:2504783489~PFAM: LytB protein~TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0123 Thena_0124 Thena_0124 Thena_0124 134815 136092 + ribosome-associated GTPase EngA COGs: COG1160 GTPase~InterPro IPR005225:IPR016484:IPR002917~KEGG: tjr:TherJR_1582 ribosome-associated GTPase EngA~PFAM: GTP-binding protein%2C HSR1-related~SPTR: Ribosome-associated GTPase EngA%3B~TIGRFAM: GTP-binding%2C EngA%3B Small GTP-binding protein~IMG reference gene:2504783490~PFAM: GTPase of unknown function~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein domain gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0124 Thena_0125 Thena_0125 Thena_0125 136095 136694 + Glycerol-3-phosphate acyltransferase COGs: COG0344 membrane protein~HAMAP: Protein of unknown function DUF205~InterPro IPR003811:IPR020788~KEGG: tal:Thal_0194 protein of unknown function DUF205~PFAM: Protein of unknown function DUF205~SPTR: Glycerol-3-phosphate acyltransferase%3B~TIGRFAM: Membrane protein YgiH~IMG reference gene:2504783491~PFAM: Domain of unknown function (DUF205)~TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0125 Thena_0126 Thena_0126 Thena_0126 136691 137674 + Glycerol-3-phosphate dehydrogenase (NAD(P)+) COGs: COG0240 Glycerol-3-phosphate dehydrogenase~HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]~InterPro IPR011128:IPR006109~KEGG: afl:Aflv_1086 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase%2C C-terminal%3B NAD-dependent glycerol-3-phosphate dehydrogenase%2C N-terminal~SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]%3B~IMG reference gene:2504783492~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus%3B NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus~TIGRFAM: glycerol-3-phosphate dehydrogenase (NAD(+)) gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0126 Thena_0127 Thena_0127 Thena_0127 137696 138016 + histone family protein DNA-binding protein COGs: COG0776 Bacterial nucleoid DNA-binding protein~InterPro IPR000119~KEGG: dhd:Dhaf_0135 histone family protein DNA-binding protein~PFAM: Histone-like bacterial DNA-binding protein~SMART: Histone-like bacterial DNA-binding protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783493~PFAM: Bacterial DNA-binding protein gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0127 Thena_0128 Thena_0128 Thena_0128 138149 138265 + pseudogene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0128 Thena_0129 Thena_0129 Thena_0129 138388 139932 - hypothetical protein KEGG: ppm:PPSC2_c0393 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783495 gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0129 Thena_0130 Thena_0130 Thena_0130 139934 140827 + glycosyl transferase family 9 COGs: COG0859 ADP-heptose:LPS heptosyltransferase~InterPro IPR002201~KEGG: nwa:Nwat_2505 glycosyl transferase family 9~PFAM: Glycosyl transferase%2C family 9~SPTR: Lipopolysaccharide heptosyltransferase II%3B~IMG reference gene:2504783496~PFAM: Glycosyltransferase family 9 (heptosyltransferase) gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0130 Thena_0131 Thena_0131 Thena_0131 141126 142700 + S-layer domain-containing protein InterPro IPR001119~KEGG: vpr:Vpar_0227 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein domain protein%3B~IMG reference gene:2504783497~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0131 Thena_0132 Thena_0132 Thena_0132 142854 143993 + Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: eba:ebA3175 putative amino acid ABC transporter~PFAM: Extracellular ligand-binding receptor~SPTR: Putative amino acid ABC transporter%3B~IMG reference gene:2504783498~PFAM: Receptor family ligand binding region gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0132 Thena_0133 Thena_0133 Thena_0133 144015 144923 + ABC-type transporter%2C integral membrane subunit COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components~InterPro IPR001851~KEGG: lip:LI0338 branched chain amino acid ABC transporter%2C permease protein~PFAM: Bacterial inner-membrane translocator~SPTR: High-affinity branched-chain amino acid ABC transporter (Permease protein)%3B~manually curated~IMG reference gene:2504783499~PFAM: Branched-chain amino acid transport system / permease component gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0133 Thena_0134 Thena_0134 Thena_0134 144920 145942 + ABC-type transporter%2C integral membrane subunit COGs: COG4177 ABC-type branched-chain amino acid transport system permease component~InterPro IPR001851~KEGG: inner-membrane translocator~PFAM: Bacterial inner-membrane translocator~SPTR: ABC tranpsorter%2C permease protein (N-ter) and ATP-binding protein (C-ter)%3B putative branched-chain amino acid transport protein%3B~IMG reference gene:2504783500~PFAM: Branched-chain amino acid transport system / permease component gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0134 Thena_0135 Thena_0135 Thena_0135 145923 146705 + Monosaccharide-transporting ATPase COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003439:IPR003593~KEGG: tth:TTC0969 branched-chain amino acid transport ATP-binding protein LivG~PFAM: ABC transporter-like~PRIAM: Monosaccharide-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Branched-chain amino acid transport ATP-binding protein livG%3B~IMG reference gene:2504783501~PFAM: ABC transporter%3B Branched-chain amino acid ATP-binding cassette transporter gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0135 Thena_0136 Thena_0136 Thena_0136 146698 147405 + ABC transporter related protein COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component~InterPro IPR003439:IPR003593~KEGG: gct:GC56T3_0529 ABC transporter related protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: Branched-chain amino acid ABC transporter (ATP-binding protein)%3B~IMG reference gene:2504783502~PFAM: ABC transporter gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0136 Thena_0137 Thena_0137 Thena_0137 147453 147845 - desulfoferrodoxin COGs: COG2033 Desulfoferrodoxin~InterPro IPR004462:IPR004793:IPR002742~KEGG: desulfoferrodoxin~PFAM: Desulfoferrodoxin%2C ferrous iron-binding region%3B Desulfoferrodoxin Dfx~SPTR: Desulfoferrodoxin%3B~TIGRFAM: Desulfoferrodoxin%3B Desulfoferrodoxin Dfx%3B Desulfoferrodoxin%2C ferrous iron-binding region~IMG reference gene:2504783503~PFAM: Desulfoferrodoxin%3B Desulfoferrodoxin%2C N-terminal domain~TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain%3B desulfoferrodoxin%3B desulfoferrodoxin ferrous iron-binding domain gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0137 Thena_0138 Thena_0138 Thena_0138 147915 148346 - hypothetical protein IMG reference gene:2504783504 gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0138 Thena_0139 Thena_0139 Thena_0139 148366 149817 - Protein of unknown function DUF2334 COGs: COG5298 conserved hypothetical protein~InterPro IPR018763~KEGG: cdl:CDR20291_0885 putative cell wall anchored protein~PFAM: Protein of unknown function DUF2334~SPTR: Putative cell wall anchored protein%3B~IMG reference gene:2504783505~PFAM: Uncharacterized protein conserved in bacteria (DUF2334) gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0139 Thena_0140 Thena_0140 Thena_0140 149786 150223 - UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: drm:Dred_2171 UspA domain-containing protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504783506~PFAM: Universal stress protein family gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0140 Thena_0141 Thena_0141 Thena_0141 150228 150551 - hypothetical protein IMG reference gene:2504783507 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0141 Thena_0142 Thena_0142 Thena_0142 150619 150966 - hypothetical protein COGs: COG1416 conserved hypothetical protein~InterPro IPR014865~KEGG: cbe:Cbei_2944 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783508~PFAM: DsrE/DsrF-like family gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0142 Thena_0143 Thena_0143 Thena_0143 151099 152742 - S-layer domain-containing protein InterPro IPR001119~KEGG: vpr:Vpar_0227 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein domain protein%3B~IMG reference gene:2504783509~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0143 Thena_0144 Thena_0144 Thena_0144 153230 154840 - S-layer domain-containing protein InterPro IPR001119~KEGG: vpr:Vpar_0227 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein domain protein%3B~IMG reference gene:2504783510~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0144 Thena_0145 Thena_0145 Thena_0145 155462 155959 + HNH endonuclease COGs: COG1403 Restriction endonuclease~InterPro IPR002711:IPR003615~KEGG: syp:SYNPCC7002_A1573 restriction endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease~SPTR: Restriction endonuclease%3B~IMG reference gene:2504783511~PFAM: HNH endonuclease gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0145 Thena_0146 Thena_0146 Thena_0146 155960 156409 - tRNA/rRNA methyltransferase (SpoU) COGs: COG0219 rRNA methylase (SpoU class)~InterPro IPR001537~KEGG: afn:Acfer_1228 tRNA/rRNA methyltransferase (SpoU)~PFAM: tRNA/rRNA methyltransferase%2C SpoU~SPTR: tRNA/rRNA methyltransferase (SpoU)%3B~IMG reference gene:2504783512~PFAM: SpoU rRNA Methylase family~TIGRFAM: rRNA methylase%2C putative%2C group 2 gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0146 Thena_0147 Thena_0147 Thena_0147 156823 157161 + nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: nis:NIS_1430 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Glutamine synthetase regulatory protein P-II%3B~IMG reference gene:2504783513~PFAM: Nitrogen regulatory protein P-II gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0147 Thena_0148 Thena_0148 Thena_0148 157158 158441 + diaminopimelate decarboxylase COGs: COG0019 Diaminopimelate decarboxylase~InterPro IPR002986:IPR000183~KEGG: cac:CA_C0608 diaminopimelate decarboxilase%2C LisA~PFAM: Orn/DAP/Arg decarboxylase 2~PRIAM: Diaminopimelate decarboxylase~SPTR: Diaminopimelate decarboxilase%2C lisA%3B~TIGRFAM: Diaminopimelate decarboxylase~IMG reference gene:2504783514~PFAM: Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain%3B Pyridoxal-dependent decarboxylase%2C pyridoxal binding domain~TIGRFAM: diaminopimelate decarboxylase gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0148 Thena_0149 Thena_0149 Thena_0149 158522 159595 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: tte:TTE0866 xylanase/chitin deacetylase~PFAM: Polysaccharide deacetylase~SPTR: Predicted xylanase/chitin deacetylase%3B~IMG reference gene:2504783515~PFAM: Polysaccharide deacetylase gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0149 Thena_0150 Thena_0150 Thena_0150 159617 160933 + Phosphoglucosamine mutase COGs: COG1109 Phosphomannomutase~InterPro IPR005844:IPR005845:IPR005846:IPR005843~KEGG: oih:OB0232 phosphoglucomutase~PFAM: Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain I%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain II%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain III%3B Alpha-D-phosphohexomutase%2C C-terminal~PRIAM: Phosphoglucosamine mutase~SPTR: Phosphoglucosamine mutase%3B~IMG reference gene:2504783516~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I~TIGRFAM: phosphoglucosamine mutase gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0150 Thena_0151 Thena_0151 Thena_0151 160991 162022 + Protein recA COGs: COG0468 RecA/RadA recombinase~HAMAP: DNA recombination and repair protein RecA~InterPro IPR013765:IPR003593~KEGG: gmc:GY4MC1_2611 RecA protein~PFAM: DNA recombination and repair protein RecA~SMART: ATPase%2C AAA+ type%2C core~SPTR: RecA protein%3B~TIGRFAM: DNA recombination and repair protein RecA~IMG reference gene:2504783517~PFAM: recA bacterial DNA recombination protein~TIGRFAM: protein RecA gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0151 Thena_0152 Thena_0152 Thena_0152 162078 163625 + 2%2C3 cyclic-nucleotide 2-phosphodiesterase COGs: COG1418 HD superfamily hydrolase~HAMAP: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase~InterProIPR017705:IPR006675:IPR018111:IPR006674:IPR 004087:IPR003607~KEGG: chy:CHY_1168 HDIG/KH domain-containing protein~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain%3B K Homology%2C type 1%2C subgroup~SMART: Metal-dependent phosphohydrolase%2C HD region%3B K Homology~SPTR: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase%3B~TIGRFAM: 2%2C3-cyclic-nucleotide 2-phosphodiesterase%3B HDIG~IMG reference gene:2504783518~PFAM: KH domain%3B HD domain%3B Domain of unknown function (DUF3552)~TIGRFAM: conserved hypothetical protein YmdA/YtgF%3B uncharacterized domain HDIG gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0152 Thena_0153 Thena_0153 Thena_0153 163622 164428 + Conserved hypothetical protein CHP00282 COGs: COG1692 conserved hypothetical protein~InterPro IPR005235:IPR004843~KEGG: pmx:PERMA_0122 hypothetical protein~PFAM: Metallophosphoesterase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00282~IMG reference gene:2504783519~TIGRFAM: metallophosphoesterase%2C MG_246/BB_0505 family gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0153 Thena_0154 Thena_0154 Thena_0154 164415 165518 + queuine tRNA-ribosyltransferase COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase~InterPro IPR004803:IPR002616~KEGG: thx:Thet_1445 queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase~PRIAM: tRNA-guanine transglycosylase~SPTR: Queuine tRNA-ribosyltransferase%3B~TIGRFAM: Queuine tRNA-ribosyltransferase%3B Queuine/other tRNA-ribosyltransferase~IMG reference gene:2504783520~PFAM: Queuine tRNA-ribosyltransferase~TIGRFAM: tRNA-guanine transglycosylases%2C various specificities%3B tRNA-guanine transglycosylase%2C queuosine-34-forming gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0154 Thena_0155 Thena_0155 Thena_0155 165566 167020 + protein-export membrane protein SecD COGs: COG0342 Preprotein translocase subunit SecD~InterPro IPR005791:IPR003335~KEGG: afn:Acfer_1522 protein-export membrane protein SecD~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Preprotein translocase subunit secD%3B~TIGRFAM: SecD export membrane protein%3B SecD/SecF/SecDF export membrane protein~IMG reference gene:2504783521~PFAM: Protein export membrane protein%3B SecD/SecF GG Motif~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0155 Thena_0156 Thena_0156 Thena_0156 167020 167895 + protein-export membrane protein SecF COGs: COG0341 Preprotein translocase subunit SecF~InterPro IPR005665:IPR003335~KEGG: dae:Dtox_1124 preprotein translocase subunit SecF~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Protein-export membrane protein SecF%3B~TIGRFAM: SecF protein%3B SecD/SecF/SecDF export membrane protein~IMG reference gene:2504783522~PFAM: Protein export membrane protein%3B SecD/SecF GG Motif~TIGRFAM: protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0156 Thena_0157 Thena_0157 Thena_0157 167913 168872 + cation diffusion facilitator family transporter COGs: COG0053 Co/Zn/Cd cation transporter~InterPro IPR002524~KEGG: clj:CLJU_c35480 putative divalent cation transporter~PFAM: Cation efflux protein~SPTR: Predicted divalent cation transporter%3B~TIGRFAM: Cation efflux protein~IMG reference gene:2504783523~PFAM: Cation efflux family~TIGRFAM: cation diffusion facilitator family transporter gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0157 Thena_0158 Thena_0158 Thena_0158 169018 169716 + HAD-superfamily hydrolase%2C subfamily IB (PSPase-like) COGs: COG4359 conserved hypothetical protein~InterPro IPR006384:IPR006383:IPR005834~KEGG: tte:TTE2448 phosphoserine phosphatase~PFAM: Haloacid dehalogenase-like hydrolase~SPTR: Phosphoserine phosphatase%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IB%2C PSPase-like%3B Pyridoxal phosphate phosphatase-related~IMG reference gene:2504783524~PFAM: Putative Phosphatase~TIGRFAM: Haloacid Dehalogenase superfamily%2C subfamily IB%2C phosphoserine phosphatase-like%3B 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0158 Thena_0159 Thena_0159 Thena_0159 169743 171107 + Acetylornithine transaminase COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase~InterPro IPR005814~KEGG: sul:SYO3AOP1_0347 aminotransferase class-III~PFAM: Aminotransferase class-III~PRIAM: Acetylornithine transaminase~SPTR: Aminotransferase class-III%3B~IMG reference gene:2504783525~PFAM: Aminotransferase class-III gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0159 Thena_0160 Thena_0160 Thena_0160 171112 171921 + carboxylesterase COGs: COG1647 Esterase/lipase~KEGG: sul:SYO3AOP1_0346 carboxylesterase~SPTR: Carboxylesterase%3B~IMG reference gene:2504783526~PFAM: Prolyl oligopeptidase family gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0160 Thena_0161 Thena_0161 Thena_0161 171905 173941 + cell division protein FtsK/SpoIIIE COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein~InterPro IPR002543:IPR018541~KEGG: tte:TTE1378 DNA segregation ATPase FtsK/SpoIIIE and related proteins~PFAM: Cell divisionFtsK/SpoIIIE%3B DNA translocase ftsK gamma~SPTR: DNA translocase ftsK%3B~IMG reference gene:2504783527~PFAM: Ftsk gamma domain%3B FtsK/SpoIIIE family gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0161 Thena_0162 Thena_0162 Thena_0162 173943 174992 + hypothetical protein KEGG: aav:Aave_4332 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783528~PFAM: Protein of unknown function%2C DUF482 gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0162 Thena_0163 Thena_0163 Thena_0163 175122 175259 + hypothetical protein IMG reference gene:2504783529 gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0163 Thena_0164 Thena_0164 Thena_0164 175284 175832 + adenylylsulfate kinase COGs: COG0529 Adenylylsulfate kinase and related kinase~InterPro IPR002891~KEGG: aae:aq_1081 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein~PFAM: Adenylylsulphate kinase%2C C-terminal~PRIAM: Adenylyl-sulfate kinase~SPTR: Probable bifunctional SAT/APS kinase%3B~TIGRFAM: Adenylylsulphate kinase%2C C-terminal~IMG reference gene:2504783530~PFAM: Adenylylsulphate kinase~TIGRFAM: adenylylsulfate kinase (apsK) gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0164 Thena_0165 Thena_0165 Thena_0165 175837 176367 - pseudogene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0165 Thena_0166 Thena_0166 Thena_0166 176462 177379 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: sul:SYO3AOP1_1200 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase family 2%3B~IMG reference gene:2504783532~PFAM: Glycosyl transferase family 2 gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0166 Thena_0167 Thena_0167 Thena_0167 177391 180717 + hypothetical protein KEGG: pfo:Pfl01_4069 glycosyltransferase-like protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783533 gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0167 Thena_0168 Thena_0168 Thena_0168 180852 182513 + flagellin domain protein COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR001492:IPR001029~KEGG: cps:CPS_1488 flagellin~PFAM: Flagellin%2C N-terminal%3B Flagellin%2C C-terminal~SPTR: Flagellin%3B~IMG reference gene:2504783534~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0168 Thena_0169 Thena_0169 Thena_0169 182615 183025 + hypothetical protein KEGG: gwc:GWCH70_3016 flagellar protein FlaG~SPTR: Flagellar protein FlaG protein%3B~IMG reference gene:2504783535~PFAM: FlaG protein gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0169 Thena_0170 Thena_0170 Thena_0170 183030 184823 + flagellar hook-associated 2 domain-containing protein COGs: COG1345 Flagellar capping protein~InterPro IPR003481:IPR010809~KEGG: mmb:Mmol_0921 flagellar hook-associated 2 domain protein~PFAM: Flagellar hook-associated 2%2C C-terminal%3B Flagellar hook-associated protein 2%2C N-terminal~SPTR: Flagellar hook-associated protein fliD%3B~IMG reference gene:2504783536~PFAM: Flagellar hook-associated protein 2 C-terminus gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0170 Thena_0171 Thena_0171 Thena_0171 184874 185260 + flagellar protein FliS COGs: COG1516 Flagellin-specific chaperone FliS~InterPro IPR003713~KEGG: dal:Dalk_0645 flagellar protein FliS~PFAM: Flagellar protein FliS~SPTR: Flagellar protein FliS%3B~TIGRFAM: Flagellar protein FliS~IMG reference gene:2504783537~PFAM: Flagellar protein FliS~TIGRFAM: flagellar biosynthetic protein FliS gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0171 Thena_0172 Thena_0172 Thena_0172 185257 185607 + hypothetical protein IMG reference gene:2504783538 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0172 Thena_0173 Thena_0173 Thena_0173 185721 186839 + metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674:IPR003607~KEGG: nth:Nther_2138 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: Metal dependent phosphohydrolase%3B~IMG reference gene:2504783539~PFAM: HD domain gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0173 Thena_0174 Thena_0174 Thena_0174 186826 187065 + carbon storage regulator InterPro IPR003751~KEGG: drm:Dred_2417 carbon storage regulator%2C CsrA~PFAM: Carbon storage regulator~SPTR: Carbon storage regulator homolog%3B~IMG reference gene:2504783540~PFAM: Global regulator protein family~TIGRFAM: carbon storage regulator (csrA) gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0174 Thena_0175 Thena_0175 Thena_0175 187046 187714 + hypothetical protein KEGG: ddf:DEFDS_0524 flagellar assembly protein FliH~SPTR: Flagellar assembly protein H%3B~IMG reference gene:2504783541 gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0175 Thena_0176 Thena_0176 Thena_0176 187717 189024 + ATPase%2C FliI/YscN family COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase~InterPro IPR005714:IPR004100:IPR000194:IPR003593~KEGG: cth:Cthe_0468 flagellar protein export ATPase FliI~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C N-terminal~PRIAM: H(+)-transporting two-sector ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Type III secretion system ATPase%2C FliI/YscN%3B~TIGRFAM: ATPase%2C type III secretion system%2C FliI/YscN~IMG reference gene:2504783542~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATPase FliI/YscN family gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0176 Thena_0177 Thena_0177 Thena_0177 189021 190079 + GTP-binding signal recognition particle SRP54 G- domain protein COGs: COG1419 Flagellar GTP-binding protein~InterPro IPR000897:IPR003593~KEGG: ddf:DEFDS_0415 flagellar biosynthesis protein FlhF~PFAM: Signal recognition particle%2C SRP54 subunit%2C GTPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Flagellar biosynthesis protein FlhF%3B~IMG reference gene:2504783543~PFAM: SRP54-type protein%2C GTPase domain gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0177 Thena_0178 Thena_0178 Thena_0178 190076 191062 + Cobyrinic acid ac-diamide synthase COGs: COG0455 ATPase involved in chromosome partitioning~InterPro IPR002586~KEGG: slp:Slip_0975 cobyrinic acid ac-diamide synthase~PFAM: Cobyrinic acid a%2Cc-diamide synthase~SPTR: Cobyrinic acid ac-diamide synthase%3B~IMG reference gene:2504783544~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0178 Thena_0179 Thena_0179 Thena_0179 191104 191502 + hypothetical protein IMG reference gene:2504783545 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0179 Thena_0180 Thena_0180 Thena_0180 191512 193836 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR013216:IPR001296~KEGG: ate:Athe_0058 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1%3B Methyltransferase type 11~SPTR: Glycosyl transferase group 1%3B~IMG reference gene:2504783546~PFAM: Methyltransferase domain%3B Glycosyl transferases group 1 gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0180 Thena_0181 Thena_0181 Thena_0181 193841 194533 - Protein of unknown function DUF2225 COGs: COG1655 conserved hypothetical protein~InterPro IPR018708~KEGG: chy:CHY_1022 hypothetical protein~PFAM: Protein of unknown function DUF2225~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783547~PFAM: Uncharacterized protein conserved in bacteria (DUF2225) gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0181 Thena_0182 Thena_0182 Thena_0182 194625 194855 + preprotein translocase%2C SecG subunit InterPro IPR004692~KEGG: cyb:CYB_2094 preprotein translocase subunit SecG~PFAM: Preprotein translocase SecG subunit~SPTR: Preprotein translocase%2C SecG subunit%3B~TIGRFAM: Preprotein translocase SecG subunit~IMG reference gene:2504783548~PFAM: Preprotein translocase SecG subunit~TIGRFAM: protein translocase%2C SecG subunit gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0182 Thena_0183 Thena_0183 Thena_0183 194864 196210 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: mmg:MTBMA_c09390 sensory transduction regulatory protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Predicted sensory transduction regulatory protein%3B~IMG reference gene:2504783549~PFAM: Glycosyl transferase family 2 gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0183 Thena_0184 Thena_0184 Thena_0184 196248 197153 - histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661:IPR003594~KEGG: dtu:Dtur_1236 PAS/PAC sensor signal transduction histidine kinase~PFAM: ATP-binding region%2C ATPase-like%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor region~SMART: Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor region%3B ATP-binding region%2C ATPase-like~SPTR: PAS/PAC sensor signal transduction histidine kinase%3B~IMG reference gene:2504783550~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0184 Thena_0185 Thena_0185 Thena_0185 197178 197852 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: ttm:Tthe_2686 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver region%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver region~SPTR: Two component transcriptional regulator%2C winged helix family%3B~IMG reference gene:2504783551~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0185 Thena_0186 Thena_0186 Thena_0186 197945 199027 + phosphate ABC transporter%2C periplasmic phosphate-binding protein COGs: COG0226 ABC-type phosphate transport system periplasmic component~InterPro IPR005673:IPR006059~KEGG: pstS%3B phosphate ABC transporter phosphate-binding protein PstS~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Phosphate ABC transporter%2C periplasmic phosphate-binding protein%3B~TIGRFAM: Periplasmic phosphate binding protein~IMG reference gene:2504783552~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: phosphate ABC transporter%2C phosphate-binding protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0186 Thena_0187 Thena_0187 Thena_0187 199114 199836 - NAD-dependent deacetylase COGs: COG0846 NAD-dependent protein deacetylase SIR2 family~HAMAP: NAD-dependent deacetylase~InterPro IPR003000~KEGG: aco:Amico_1280 silent information regulator protein Sir2~PFAM: NAD-dependent histone deacetylase%2C silent information regulator Sir2~SPTR: Silent information regulator protein Sir2%3B~IMG reference gene:2504783553~PFAM: Sir2 family gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0187 Thena_0188 Thena_0188 Thena_0188 199839 200696 - beta-lactamase domain protein COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II~KEGG: adg:Adeg_1793 beta-lactamase domain protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504783554~PFAM: Metallo-beta-lactamase superfamily gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0188 Thena_0189 Thena_0189 Thena_0189 201034 202263 + Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) COGs: COG0281 Malic enzyme~InterPro IPR012301:IPR012302~KEGG: bbe:BBR47_13780 NAD-dependent malic enzyme~PFAM: Malic enzyme%2C NAD-binding%3B Malic enzyme%2C N-terminal~PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))~SPTR: Probable NAD-dependent malic enzyme%3B~IMG reference gene:2504783555~PFAM: Malic enzyme%2C NAD binding domain%3B Malic enzyme%2C N-terminal domain gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0189 Thena_0190 Thena_0190 Thena_0190 202272 202658 + putative succinate dehydrogenase%2C cytochrome subunit KEGG: ddr:Deide_12430 putative succinate dehydrogenase%2C cytochrome subunit~SPTR: Putative Succinate dehydrogenase%2C cytochrome subunit%3B~IMG reference gene:2504783556~PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit~TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0190 Thena_0191 Thena_0191 Thena_0191 202668 202967 + hypothetical protein IMG reference gene:2504783557~PFAM: CybS gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0191 Thena_0192 Thena_0192 Thena_0192 203003 204787 + succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit~InterPro IPR011281:IPR014006:IPR003953:IPR004112~KEGG: rmr:Rmar_0210 succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal%3B Fumarate reductase/succinate dehydrogenase flavoprotein%2C C-terminal~PRIAM: Succinate dehydrogenase (ubiquinone)~SPTR: Succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit%3B~TIGRFAM: Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit%3B Succinate dehydrogenase%2C flavoprotein subunit~IMG reference gene:2504783558~PFAM: domain%3B FAD binding domain~TIGRFAM: succinate dehydrogenase%2C flavoprotein subunit%2C E. coli/mitochondrial subgroup%3B succinate dehydrogenase or fumarate reductase%2C flavoprotein subunitGram-negative/mitochondrial subgroup gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0192 Thena_0193 Thena_0193 Thena_0193 204797 205507 + succinate dehydrogenase and fumarate reductase iron-sulfur protein COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit~InterPro IPR004489:IPR001041~KEGG: ddf:DEFDS_0685 succinate dehydrogenase iron-sulfur protein~PFAM: Ferredoxin~PRIAM: Succinate dehydrogenase~SPTR: Succinate dehydrogenase%2C iron-sulfur protein%3B~TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein~IMG reference gene:2504783559~PFAM: 2Fe-2S iron-sulfur cluster binding domain~TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0193 Thena_0194 Thena_0194 Thena_0194 205659 207008 + Glutamate synthase (NADPH) COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase~InterPro IPR013027~KEGG: glutamate synthase (NADPH) small subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Glutamate synthase (NADPH)~SPTR: Glutamate synthase (NADPH)%2C homotetrameric%3B~IMG reference gene:2504783560~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0194 Thena_0195 Thena_0195 Thena_0195 207049 207888 + hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain~InterPro IPR004646~KEGG: chy:CHY_1375 fumarate hydratase~PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region~PRIAM: Fumarate hydratase~SPTR: Fumarate hydratase%2C alpha subunit%3B~TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region~IMG reference gene:2504783561~PFAM: Fumarate hydratase (Fumerase)~TIGRFAM: hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha region gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0195 Thena_0196 Thena_0196 Thena_0196 207935 208417 + hypothetical protein IMG reference gene:2504783562 gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0196 Thena_0197 Thena_0197 Thena_0197 208506 210308 + GTP-binding protein lepA COGs: COG0481 Membrane GTPase LepA~HAMAP: GTP-binding protein lepA~InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842~KEGG: tte:TTE0951 GTP-binding protein LepA~PFAM: GTP-binding protein LepA%2C C-terminal%3B Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: Elongation factor 4%3B~TIGRFAM: GTP-binding protein LepA%3B Small GTP-binding protein~IMG reference gene:2504783563~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B GTP-binding protein LepA C-terminus~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein domain gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0197 Thena_0198 Thena_0198 Thena_0198 210292 211419 + HemN domain protein COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase~InterPro IPR007197:IPR010723:IPR006638~KEGG: pmx:PERMA_1838 putative oxygen-independent coproporphyrinogen III oxidase~PFAM: HemN%2C C-terminal%3B Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative oxygen-independent coproporphyrinogen III oxidase%3B~IMG reference gene:2504783564~PFAM: Radical SAM superfamily%3B HemN C-terminal region~TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0198 Thena_0199 Thena_0199 Thena_0199 211471 211656 + protein of unknown function DUF951 InterPro IPR009296~KEGG: bli:BL05397 hypothetical protein~PFAM: Protein of unknown function DUF951%2C bacterial~SPTR: Putative uncharacterized protein yyzM%3B~IMG reference gene:2504783565~PFAM: Bacterial protein of unknown function (DUF951) gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0199 Thena_0200 Thena_0200 Thena_0200 211679 212764 + DegT/DnrJ/EryC1/StrS aminotransferase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653~KEGG: tte:TTE0651 cell wall biogenesis regulatory protein~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~SPTR: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis%3B~IMG reference gene:2504783566~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0200 Thena_0201 Thena_0201 Thena_0201 212828 214507 + phosphoesterase RecJ domain protein COGs: COG0608 Single-stranded DNA-specific exonuclease~InterPro IPR001667:IPR003156~KEGG: cst:CLOST_1307 single-stranded-DNA-specific exonuclease~PFAM: Phosphoesterase%2C RecJ-like%3B Phosphoesterase%2C DHHA1~SPTR: Putative single-stranded-DNA-specific exonuclease%3B~IMG reference gene:2504783567~PFAM: DHH family%3B DHHA1 domain~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0201 Thena_0202 Thena_0202 Thena_0202 214537 216876 + (p)ppGpp synthetase I%2C SpoT/RelA COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase~InterProIPR004811:IPR006674:IPR007685:IPR004095:IPR 002912:IPR003607~KEGG: hor:Hore_12190 (p)ppGpp synthetase I%2C SpoT/RelA~PFAM: RelA/SpoT%3B Metal-dependent phosphohydrolase%2C HD region%2C subdomain%3B TGS%3B Amino acid-binding ACT~PRIAM: GTP diphosphokinase~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: (P)ppGpp synthetase I%2C SpoT/RelA%3B~TIGRFAM: RelA/SpoT protein~IMG reference gene:2504783568~PFAM: HD domain%3B TGS domain%3B Region found in RelA / SpoT proteins~TIGRFAM: (p)ppGpp synthetase%2C RelA/SpoT family gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0202 Thena_0203 Thena_0203 Thena_0203 216876 218519 + excinuclease ABC%2C C subunit COGs: COG0322 Nuclease subunit of the excinuclease complex~InterPro IPR004791:IPR000305:IPR001943:IPR001162~KEGG: hne:HNE_2966 excinuclease ABC subunit C~PFAM: Excinuclease ABC%2C C subunit%2C N-terminal%3B UvrB/UvrC protein%3B Excinuclease ABC%2C C subunit%2C C-terminal~SMART: Excinuclease ABC%2C C subunit%2C N-terminal~SPTR: UvrABC system protein C%3B~TIGRFAM: Excinuclease ABC%2C C subunit~IMG reference gene:2504783569~PFAM: UvrB/uvrC motif%3B UvrC Helix-hairpin-helix N-terminal%3B GIY-YIG catalytic domain~TIGRFAM: excinuclease ABC%2C C subunit gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0203 Thena_0204 Thena_0204 Thena_0204 218701 218811 + hypothetical protein IMG reference gene:2504783570 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0204 Thena_0205 Thena_0205 Thena_0205 218813 219946 + Peptidase M23 COGs: COG4942 Membrane-bound metallopeptidase~InterPro IPR016047~KEGG: swo:Swol_0247 peptidase M23B~PFAM: Peptidase M23~SPTR: Peptidase M23B%3B~IMG reference gene:2504783571~PFAM: Peptidase family M23 gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0205 Thena_0206 Thena_0206 Thena_0206 220010 221257 + processing peptidase COGs: COG0612 Zn-dependent peptidase~InterPro IPR011765:IPR007863~KEGG: cce:Ccel_1706 peptidase M16 domain protein~PFAM: Peptidase M16%2C C-terminal%3B Peptidase M16%2C N-terminal~PRIAM: processing peptidase~SPTR: Peptidase M16 domain protein%3B~IMG reference gene:2504783572~PFAM: Peptidase M16 inactive domain%3B Insulinase (Peptidase family M16) gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0206 Thena_0207 Thena_0207 Thena_0207 221258 222604 - RNA modification enzyme%2C MiaB family COGs: COG0621 2-methylthioadenine synthetase~InterPro IPR005839:IPR013848:IPR007197:IPR006638~KEGG: pmo:Pmob_1849 (dimethylallyl)adenosine tRNA methylthiotransferase~PFAM: Radical SAM%3B Methylthiotransferase%2C N-terminal~SMART: Elongator protein 3/MiaB/NifB~SPTR: (Dimethylallyl)adenosine tRNA methylthiotransferase miaB%3B~TIGRFAM: Methylthiotransferase~IMG reference gene:2504783573~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: radical SAM methylthiotransferase%2C MiaB/RimO family gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0207 Thena_0208 Thena_0208 Thena_0208 222576 222848 - Stage V sporulation protein S COGs: COG2359 conserved hypothetical protein~InterPro IPR007347~KEGG: toc:Toce_1207 stage V sporulation protein S~PFAM: Stage V sporulation protein S~SPTR: Stage V sporulation protein S%3B~IMG reference gene:2504783574~PFAM: Stage V sporulation protein S (SpoVS) gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0208 Thena_0209 Thena_0209 Thena_0209 222947 225154 - methyl-accepting chemotaxis sensory transducer with Cache sensor COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004010:IPR003660:IPR004089~KEGG: toc:Toce_0469 methyl-accepting chemotaxis sensory transducer with cache sensor~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain%3B Cache~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor%3B~IMG reference gene:2504783575~PFAM: Cache domain%3B HAMP domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0209 Thena_0210 Thena_0210 Thena_0210 225507 226253 + pseudouridine synthase Rsu COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase~InterPro IPR000748:IPR002942:IPR006145~KEGG: saf:SULAZ_0545 ribosomal large subunit pseudouridine synthase B~PFAM: RNA-binding S4%3B Pseudouridine synthase%2C RsuA and RluB/C/D/E/F~SMART: RNA-binding S4~SPTR: Ribosomal large subunit pseudouridine synthase B%3B~TIGRFAM: Pseudouridine synthase%2C RsuA and RluB/E/F~manually curated~IMG reference gene:2504783576~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0210 Thena_0211 Thena_0211 Thena_0211 226231 226521 + SirA-like domain-containing protein InterPro IPR001455~KEGG: oih:OB2651 hypothetical protein~PFAM: SirA-like~SPTR: Hypothetical conserved protein%3B~IMG reference gene:2504783577~PFAM: SirA-like protein gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0211 Thena_0212 Thena_0212 Thena_0212 226508 227635 + Cysteine desulfurase COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase~InterPro IPR000192~KEGG: tal:Thal_0259 cysteine desulfurase~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Cysteine desulfurase~SPTR: Cysteine desulfurase%3B~IMG reference gene:2504783578~PFAM: Aminotransferase class-V gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0212 Thena_0213 Thena_0213 Thena_0213 227643 228068 - transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator~PFAM: Transcriptional regulator%2C Rrf2~SPTR: Transcriptional regulator%2C BadM/Rrf2 family%3B~TIGRFAM: Transcriptional regulator%2C Rrf2~IMG reference gene:2504783579~PFAM: Transcriptional regulator~TIGRFAM: Rrf2 family protein gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0213 Thena_0214 Thena_0214 Thena_0214 228142 229677 - virulence factor MVIN family protein COGs: COG0728 membrane protein putative virulence factor~InterPro IPR004268~KEGG: cst:CLOST_0370 integral membrane protein MviN~PFAM: Flagellin assembly%2C membrane protein MviN~SPTR: Integral membrane protein MviN%3B~IMG reference gene:2504783580~PFAM: MviN-like protein~TIGRFAM: integral membrane protein MviN gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0214 Thena_0215 Thena_0215 Thena_0215 230002 230265 + Stage V sporulation protein S COGs: COG2359 conserved hypothetical protein~InterPro IPR007347~KEGG: swo:Swol_1250 stage V sporulation protein S~PFAM: Stage V sporulation protein S~SPTR: Stage V sporulation protein S%3B~IMG reference gene:2504783582~PFAM: Stage V sporulation protein S (SpoVS) gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0215 Thena_0216 Thena_0216 Thena_0216 230370 230774 + hypothetical protein KEGG: cwo:Cwoe_0009 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783583 gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0216 Thena_0217 Thena_0217 Thena_0217 230787 231731 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR007060:IPR016047~KEGG: thx:Thet_0762 peptidase M23~PFAM: Peptidase M23%3B Septum formation initiator~SPTR: Membrane protein metalloendopeptidase%3B~IMG reference gene:2504783584~PFAM: Septum formation initiator%3B Peptidase family M23 gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0217 Thena_0218 Thena_0218 Thena_0218 231746 232099 + protein of unknown function DUF583 COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination~InterPro IPR007607~KEGG: nth:Nther_2923 protein of unknown function DUF583~PFAM: Protein of unknown function DUF583~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783585~PFAM: Protein of unknown function%2C DUF583 gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0218 Thena_0219 Thena_0219 Thena_0219 232108 232914 + protein of unknown function UPF0011 COGs: COG0313 methyltransferase~InterPro IPR008189:IPR000878~KEGG: uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase~PFAM: Tetrapyrrole methylase~SPTR: Tetrapyrrole methylase%3B~TIGRFAM: Uncharacterised protein family UPF0011~IMG reference gene:2504783586~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase%2C YraL family gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0219 Thena_0220 Thena_0220 Thena_0220 233182 234708 + Methionyl-tRNA synthetase COGs: COG0143 Methionyl-tRNA synthetase~HAMAP: Methionyl-tRNA synthetase~InterPro IPR002304:IPR015413~KEGG: methionyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class I (M)~PRIAM: Methionine--tRNA ligase~SPTR: Methionyl-tRNA synthetase%3B~TIGRFAM: Methionyl-tRNA synthetase%2C class Ia~IMG reference gene:2504783587~PFAM: tRNA synthetases class I (M)~TIGRFAM: methionyl-tRNA synthetase gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0220 Thena_0221 Thena_0221 Thena_0221 234708 235508 + hydrolase%2C TatD family COGs: COG0084 Mg-dependent DNase~InterPro IPR015991:IPR001130~KEGG: aoe:Clos_2661 TatD family hydrolase~PFAM: Deoxyribonuclease%2C TatD-related~SPTR: Hydrolase%2C TatD family%3B~TIGRFAM: Deoxyribonuclease%2C TatD Mg-dependent%2C prokaryote~IMG reference gene:2504783588~PFAM: TatD related DNase~TIGRFAM: hydrolase%2C TatD family gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0221 Thena_0222 Thena_0222 Thena_0222 235586 236380 + UPF0103/Mediator of ErbB2-driven cell motility-containing protein COGs: COG1355 dioxygenase~InterPro IPR002737~KEGG: dth:DICTH_1399 hypothetical protein~PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo)%2C related~SPTR: Conserved protein%3B~IMG reference gene:2504783589~PFAM: Memo-like protein gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0222 Thena_0223 Thena_0223 Thena_0223 236388 236729 + CutA1 divalent ion tolerance protein COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations~InterPro IPR004323~KEGG: ngr:NAEGRDRAFT_82114 hypothetical protein~PFAM: Divalent ion tolerance protein%2C CutA1~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783590~PFAM: CutA1 divalent ion tolerance protein gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0223 Thena_0224 Thena_0224 Thena_0224 236729 237481 + protein of unknown function DUF140 COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component~InterPro IPR003453~KEGG: mar:MAE_12060 hypothetical protein~PFAM: Protein of unknown function DUF140~SPTR: Membrane protein%3B~TIGRFAM: Protein of unknown function DUF140~IMG reference gene:2504783591~PFAM: Domain of unknown function DUF140~TIGRFAM: conserved hypothetical integral membrane protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0224 Thena_0225 Thena_0225 Thena_0225 237478 238230 + Phosphonate-transporting ATPase COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component~InterPro IPR003439:IPR003593~KEGG: saf:SULAZ_1668 methionine import ATP-binding protein MetN~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Methionine import ATP-binding protein MetN%3B~IMG reference gene:2504783592~PFAM: ABC transporter gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0225 Thena_0226 Thena_0226 Thena_0226 238264 239532 + Mammalian cell entry related domain protein COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component~InterPro IPR003399~KEGG: afn:Acfer_1699 mammalian cell entry related domain protein~PFAM: Mammalian cell entry related~SPTR: Putative ABC transport system substrate-binding protein%3B~IMG reference gene:2504783593~PFAM: mce related protein~TIGRFAM: virulence factor Mce family protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0226 Thena_0227 Thena_0227 Thena_0227 239581 240732 + phosphonopyruvate decarboxylase-related protein COGs: COG3635 phosphoglycerate mutase AP superfamily~InterPro IPR004456:IPR019304:IPR006124~KEGG: gbm:Gbem_1879 cofactor-independent phosphoglycerate mutase~PFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%3B Metalloenzyme~PRIAM: Phosphoglycerate mutase~SPTR: Proposed homoserine kinase%3B~TIGRFAM: Cofactor-independent phosphoglycerate mutase%2C archaeal~IMG reference gene:2504783594~PFAM: Metalloenzyme superfamily%3B 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase~TIGRFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%2C archaeal form gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0227 Thena_0228 Thena_0228 Thena_0228 240746 241603 + homoserine kinase COGs: COG0083 Homoserine kinase~InterPro IPR000870:IPR006204:IPR013750~KEGG: hth:HTH_1473 homoserine kinase~PFAM: GHMP kinase%3B GHMP kinase%2C C-terminal~SPTR: Homoserine kinase%3B~TIGRFAM: Homoserine kinase~IMG reference gene:2504783595~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: homoserine kinase gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0228 Thena_0229 Thena_0229 Thena_0229 241655 242887 + aspartate kinase COGs: COG0527 Aspartokinase~InterPro IPR005260:IPR001341:IPR001048:IPR002912~KEGG: adg:Adeg_0884 aspartate kinase~PFAM: Aspartate/glutamate/uridylate kinase%3B Amino acid-binding ACT~SPTR: Aspartate kinase%3B~TIGRFAM: Aspartate kinase region%3B Aspartate kinase%2C monofunctional class~IMG reference gene:2504783596~PFAM: ACT domain%3B Amino acid kinase family~TIGRFAM: aspartate kinase%2C monofunctional class%3B aspartate kinase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0229 Thena_0230 Thena_0230 Thena_0230 242880 244034 + protein of unknown function DUF39 COGs: COG1900 conserved hypothetical protein~InterPro IPR002708~KEGG: tjr:TherJR_1173 protein of unknown function DUF39~PFAM: Protein of unknown function DUF39~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783597~PFAM: Domain of unknown function DUF39 gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0230 Thena_0231 Thena_0231 Thena_0231 244031 244447 + NIL domain-containing protein InterPro IPR018449:IPR001450~KEGG: det:DET0920 iron-sulfur cluster-binding protein~PFAM: NIL domain%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Iron-sulfur cluster-binding protein%3B~IMG reference gene:2504783598~PFAM: 4Fe-4S binding domain%3B NIL domain gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0231 Thena_0232 Thena_0232 Thena_0232 244619 245548 + 1-phosphofructokinase COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)~InterPro IPR017583:IPR011611~KEGG: mtp:Mthe_0686 1-phosphofructokinase~PFAM: Carbohydrate/purine kinase~PRIAM: 1-phosphofructokinase~SPTR: 1-phosphofructokinase%3B~TIGRFAM: 1-phosphofructokinase~IMG reference gene:2504783600~PFAM: pfkB family carbohydrate kinase~TIGRFAM: 1-phosphofructokinase%3B hexose kinase%2C 1-phosphofructokinase family gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0232 Thena_0233 Thena_0233 Thena_0233 245711 247591 + selenocysteine-specific translation elongation factor COGs: COG3276 Selenocysteine-specific translation elongation factor~InterProIPR005225:IPR004535:IPR000795:IPR004161:IPR 015191~KEGG: nth:Nther_1114 selenocysteine-specific translation elongation factor~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor SelB%2C winged helix%2C type 3~SPTR: Selenocysteine-specific translation elongation factor%3B~TIGRFAM: Translation elongation factor%2C selenocysteine-specific%3B Small GTP-binding protein~IMG reference gene:2504783602~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu GTP binding domain%3B Elongation factor SelB%2C winged helix~TIGRFAM: selenocysteine-specific elongation factor SelB%3B small GTP-binding protein domain gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0233 Thena_0234 Thena_0234 Thena_0234 247592 248311 + Sec-independent periplasmic protein translocase COGs: COG0805 Sec-independent protein secretion pathway component TatC~InterPro IPR002033~KEGG: hor:Hore_03800 twin arginine targeting translocation protein %2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase~SPTR: Twin arginine targeting translocation protein %2C TatC subunit%3B~IMG reference gene:2504783603~PFAM: Sec-independent protein translocase protein (TatC)~TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0234 Thena_0235 Thena_0235 Thena_0235 248299 249660 + Molybdopterin-guanine dinucleotide biosynthesis protein A COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity~HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A~InterPro IPR003786~KEGG: tjr:TherJR_2345 formate dehydrogenase family accessory protein FdhD~PFAM: Formate dehydrogenase%2C subunit FdhD~SPTR: Formate dehydrogenase family accessory protein FdhD%3B~TIGRFAM: Formate dehydrogenase%2C subunit FdhD~IMG reference gene:2504783604~PFAM: FdhD/NarQ family~TIGRFAM: formate dehydrogenase family accessory protein FdhD gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0235 Thena_0236 Thena_0236 Thena_0236 249661 249870 + Sec-independent protein translocase protein tatA/E-like protein HAMAP: Twin-arginine translocation protein TatA/E~InterPro IPR006312:IPR003369~KEGG: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: Bacterial sec-independent translocation protein mttA/Hcf106~SPTR: Sec-independent protein translocase protein TatA%3B~TIGRFAM: Twin-arginine translocation protein TatA/E~IMG reference gene:2504783605~PFAM: mttA/Hcf106 family~TIGRFAM: twin arginine-targeting protein translocase%2C TatA/E family gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0236 Thena_0237 Thena_0237 Thena_0237 249878 251200 - Xanthine/uracil/vitamin C permease COGs: COG2252 Permease~InterPro IPR006043~KEGG: chy:CHY_0697 xanthine/uracil permease family protein~PFAM: Xanthine/uracil/vitamin C permease~SPTR: Xanthine/uracil permease family protein%3B~IMG reference gene:2504783606~PFAM: Permease family gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0237 Thena_0238 Thena_0238 Thena_0238 251488 253281 + GTP-binding protein TypA COGs: COG1217 membrane GTPase involved in stress response~InterProIPR005225:IPR006298:IPR000795:IPR004161:IPR 000640~KEGG: vpr:Vpar_1324 GTP-binding protein TypA~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: GTP-binding protein TypA%3B~TIGRFAM: GTP-binding protein TypA%3B Small GTP-binding protein~IMG reference gene:2504783607~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain~TIGRFAM: GTP-binding protein TypA/BipA%3B small GTP-binding protein domain gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0238 Thena_0239 Thena_0239 Thena_0239 253316 254374 + Alanine racemase COGs: COG0787 Alanine racemase~HAMAP: Alanine racemase~InterPro IPR000821:IPR001608:IPR011079~KEGG: min:Minf_0070 alanine racemase~PFAM: Alanine racemase%2C N-terminal%3B Alanine racemase%2C C-terminal~PRIAM: Alanine racemase~SPTR: Alanine racemase%3B~TIGRFAM: Alanine racemase~IMG reference gene:2504783608~PFAM: Alanine racemase%2C C-terminal domain%3B Alanine racemase%2C N-terminal domain~TIGRFAM: alanine racemase gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0239 Thena_0240 Thena_0240 Thena_0240 254655 255815 + Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: tmz:Tmz1t_2471 extracellular ligand-binding receptor~PFAM: Extracellular ligand-binding receptor~SPTR: Extracellular ligand-binding receptor%3B~IMG reference gene:2504783609~PFAM: Receptor family ligand binding region gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0240 Thena_0241 Thena_0241 Thena_0241 255919 257148 + metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674:IPR003607~KEGG: slp:Slip_2166 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: Metal dependent phosphohydrolase%3B~IMG reference gene:2504783610~PFAM: HD domain gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0241 Thena_0242 Thena_0242 Thena_0242 257129 257769 + pseudogene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0242 Thena_0243 Thena_0243 Thena_0243 257878 259263 + Bifunctional protein glmU COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)~HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase~InterPro IPR005882:IPR005835:IPR001451~KEGG: tte:TTE2572 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase~PFAM: Nucleotidyl transferase%3B Bacterial transferase hexapeptide repeat~PRIAM: Glucosamine-1-phosphate N-acetyltransferase~SPTR: Bifunctional protein glmU%3B~TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase~IMG reference gene:2504783612~PFAM: Nucleotidyl transferase~TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0243 Thena_0244 Thena_0244 Thena_0244 259306 260250 + ribose-phosphate pyrophosphokinase COGs: COG0462 Phosphoribosylpyrophosphate synthetase~InterPro IPR005946:IPR000836~KEGG: gka:GK0044 ribose-phosphate pyrophosphokinase~PFAM: Phosphoribosyltransferase~PRIAM: Ribose-phosphate diphosphokinase~SPTR: Ribose-phosphate diphosphokinase%3B~TIGRFAM: Phosphoribosyl pyrophosphokinase~IMG reference gene:2504783613~PFAM: Phosphoribosyl transferase domain~TIGRFAM: ribose-phosphate pyrophosphokinase gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0244 Thena_0245 Thena_0245 Thena_0245 260319 261236 + transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119~KEGG: pjd:Pjdr2_3773 transcriptional regulator%2C LysR family~PFAM: LysR%2C substrate-binding%3B HTH transcriptional regulator%2C LysR~SPTR: Transcriptional regulator%2C LysR family%3B~IMG reference gene:2504783614~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0245 Thena_0246 Thena_0246 Thena_0246 261239 262720 + DNA polymerase III%2C subunits gamma and tau COGs: COG2812 DNA polymerase III gamma/tau subunits~InterPro IPR012763:IPR003959:IPR003593~KEGG: dae:Dtox_0092 DNA polymerase III%2C subunits gamma and tau~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: DNA polymerase III%2C subunits gamma and tau%3B~TIGRFAM: DNA polymerase III%2C subunit gamma/ tau~IMG reference gene:2504783615~PFAM: ATPase family associated with various cellular activities (AAA)~TIGRFAM: DNA polymerase III%2C subunit gamma and tau gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0246 Thena_0247 Thena_0247 Thena_0247 262774 263052 + UPF0133 protein ybaB COGs: COG0718 conserved hypothetical protein~HAMAP: Uncharacterised protein family UPF0133~InterPro IPR004401~KEGG: tjr:TherJR_0069 hypothetical protein~PFAM: Uncharacterised protein family UPF0133~SPTR: UPF0133 protein TherJR_0069%3B~TIGRFAM: Uncharacterised protein family UPF0133~IMG reference gene:2504783616~PFAM: Uncharacterised BCR%2C YbaB family COG0718~TIGRFAM: DNA-binding protein%2C YbaB/EbfC family gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0247 Thena_0248 Thena_0248 Thena_0248 263052 263663 + Recombination protein recR COGs: COG0353 Recombinational DNA repair protein (RecF pathway)~HAMAP: Recombination protein recR~InterPro IPR000093:IPR015967~KEGG: nth:Nther_0017 DNA replication and repair protein RecR~SPTR: Recombination protein recR%3B~TIGRFAM: RecR protein~IMG reference gene:2504783617~PFAM: Toprim domain%3B RecR protein~TIGRFAM: recombination protein RecR gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0248 Thena_0249 Thena_0249 Thena_0249 263762 264895 + hypothetical protein IMG reference gene:2504783618 gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0249 Thena_0250 Thena_0250 Thena_0250 264900 265907 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: ipo:Ilyop_2867 mannose-6-phosphate isomerase%2C type 2~PFAM: Glycosyl transferase%2C group 1~SPTR: Mannose-6-phosphate isomerase%2C type 2%3B~IMG reference gene:2504783619~PFAM: Glycosyl transferases group 1 gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0250 Thena_0251 Thena_0251 Thena_0251 265922 266872 + glycosidase related protein COGs: COG2152 glycosylase~InterPro IPR007184~KEGG: dps:DP2454 hypothetical protein~PFAM: Glycosidase%2C PH1107-related~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783620~PFAM: Domain of unknown function (DUF377) gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0251 Thena_0252 Thena_0252 Thena_0252 266885 267907 - FO synthase%2C subunit 2 COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR020050:IPR007197~KEGG: apo:Arcpr_1413 radical SAM domain protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%2C CofH subfamily%3B~TIGRFAM: FO synthase%2C subunit 2~IMG reference gene:2504783621~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM domain protein%2C CofH subfamily%3B menaquinone biosynthesis protein%2C SCO4550 family gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0252 Thena_0253 Thena_0253 Thena_0253 267927 268670 - protein of unknown function DUF178 COGs: COG1427 periplasmic solute-binding protein~InterPro IPR003773~KEGG: swo:Swol_1158 hypothetical protein~PFAM: Protein of unknown function DUF178~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783622~PFAM: Putative periplasminc binding protein (DUF178) gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0253 Thena_0254 Thena_0254 Thena_0254 268709 269716 - FO synthase%2C subunit 2 COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR020050:IPR007197:IPR006638~KEGG: cni:Calni_1638 radical sam domain protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~TIGRFAM: FO synthase%2C subunit 2~IMG reference gene:2504783623~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM domain protein%2C CofH subfamily gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0254 Thena_0255 Thena_0255 Thena_0255 269709 270533 - hypothetical protein COGs: COG2107 periplasmic solute-binding protein~InterPro IPR003794~KEGG: aae:aq_313 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783624~PFAM: Putative periplasminc binding protein (DUF178) gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0255 Thena_0256 Thena_0256 Thena_0256 270555 271118 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: rca:Rcas_4215 TetR family transcriptional regulator~PFAM: Transcriptional regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C TetR family%3B~IMG reference gene:2504783625~PFAM: Bacterial regulatory proteins%2C tetR family gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0256 Thena_0257 Thena_0257 Thena_0257 271342 272295 + glycosidase related protein COGs: COG2152 glycosylase~InterPro IPR007184~KEGG: tte:TTE2626 glycosylase~PFAM: Glycosidase%2C PH1107-related~SPTR: Predicted glycosylase%3B~IMG reference gene:2504783626~PFAM: Domain of unknown function (DUF377) gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0257 Thena_0258 Thena_0258 Thena_0258 272292 274583 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: rmr:Rmar_1363 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~IMG reference gene:2504783627~PFAM: Glycosyl transferases group 1 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0258 Thena_0259 Thena_0259 Thena_0259 274590 275417 + putative transcriptional acitvator%2C Baf family COGs: COG1521 Putative transcriptional regulator protein~HAMAP: Type III pantothenate kinase~InterPro IPR004619~KEGG: mtt:Ftrac_2011 transcriptional acitvator%2C baf family~PFAM: Bordetella pertussis Bvg accessory factor~SPTR: Type III pantothenate kinase%3B~TIGRFAM: Bordetella pertussis Bvg accessory factor~IMG reference gene:2504783628~PFAM: Bordetella pertussis Bvg accessory factor family~TIGRFAM: pantothenate kinase%2C type III gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0259 Thena_0260 Thena_0260 Thena_0260 275463 277532 + small GTP-binding protein COGs: COG0480 Translation elongation factors (GTPase)~InterPro IPR005225:IPR000795:IPR005517:IPR000640~KEGG: nth:Nther_0010 translation elongation factor 2 (EF-2/EF-G)~PFAM: Translation elongation factor EFG/EF2%2C domain IV%3B Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: Elongation factor G 2%3B~TIGRFAM: Small GTP-binding protein~IMG reference gene:2504783629~PFAM: Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0260 Thena_0261 Thena_0261 Thena_0261 277513 279387 + DNA ligase COGs: COG1793 ATP-dependent DNA ligase~HAMAP: DNA ligase~InterPro IPR000977:IPR012308:IPR012310:IPR012309~KEGG: dtu:Dtur_0780 DNA ligase I%2C ATP-dependent Dnl1~PFAM: ATP dependent DNA ligase%2C central%3B DNA ligase%2C N-terminal%3B ATP dependent DNA ligase%2C C-terminal~PRIAM: DNA ligase (ATP)~SPTR: Probable DNA ligase%3B~TIGRFAM: ATP-dependent DNA ligase~IMG reference gene:2504783630~PFAM: ATP dependent DNA ligase domain%3B DNA ligase N terminus%3B ATP dependent DNA ligase C terminal region~TIGRFAM: DNA ligase I%2C ATP-dependent (dnl1) gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0261 Thena_0262 Thena_0262 Thena_0262 279404 280534 + Serine--pyruvate transaminase COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase~InterPro IPR000192~KEGG: bts:Btus_1044 aminotransferase class V~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Serine--pyruvate transaminase~SPTR: Aminotransferase class V%3B~IMG reference gene:2504783631~PFAM: Aminotransferase class-V gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0262 Thena_0263 Thena_0263 Thena_0263 280598 283234 + metal dependent phosphohydrolase with GAF sensor COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain~InterPro IPR003660:IPR003018:IPR006674:IPR003607~KEGG: drm:Dred_3089 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain%3B GAF%3B HAMP linker domain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: Metal dependent phosphohydrolase%3B~IMG reference gene:2504783632~PFAM: HAMP domain%3B HD domain%3B GAF domain gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0263 Thena_0264 Thena_0264 Thena_0264 283257 283700 + hypothetical protein IMG reference gene:2504783633 gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0264 Thena_0265 Thena_0265 Thena_0265 283702 284745 + protein of unknown function DUF933 COGs: COG0012 GTPase probable translation factor~InterPro IPR013029~KEGG: sti:Sthe_0322 GTP-binding protein YchF~PFAM: Protein of unknown function DUF933~SPTR: GTP-binding protein YchF%3B~IMG reference gene:2504783634~PFAM: Protein of unknown function (DUF933)~TIGRFAM: GTP-binding protein YchF gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0265 Thena_0266 Thena_0266 Thena_0266 284765 285508 + ApbE family lipoprotein COGs: COG2122 conserved hypothetical protein~InterPro IPR003374~KEGG: deg:DehalGT_0764 ApbE family lipoprotein~PFAM: ApbE-like lipoprotein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783635~PFAM: ApbE family gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0266 Thena_0267 Thena_0267 Thena_0267 285719 286099 + 30S ribosomal protein S6 COGs: COG0360 Ribosomal protein S6~HAMAP: Ribosomal protein S6%2C bacterial-like~InterPro IPR020814:IPR000529~KEGG: drm:Dred_3308 30S ribosomal protein S6~PFAM: Ribosomal protein S6%2C bacterial-like~SPTR: 30S ribosomal protein S6%3B~TIGRFAM: Ribosomal protein S6~IMG reference gene:2504783637~PFAM: Ribosomal protein S6~TIGRFAM: ribosomal protein S6 gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0267 Thena_0268 Thena_0268 Thena_0268 286083 286508 + single-strand binding protein COGs: COG0629 Single-stranded DNA-binding protein~InterPro IPR011344:IPR000424~KEGG: amt:Amet_0033 single-strand binding protein~PFAM: Primosome PriB/single-strand DNA-binding~SPTR: Single-strand binding protein%3B~TIGRFAM: Single-strand DNA-binding~IMG reference gene:2504783638~PFAM: Single-strand binding protein family~TIGRFAM: single stranded DNA-binding protein (ssb) gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0268 Thena_0269 Thena_0269 Thena_0269 286589 286822 + 30S ribosomal protein S18 COGs: COG0238 Ribosomal protein S18~HAMAP: 30S ribosomal protein S18~InterPro IPR001648~KEGG: cow:Calow_1781 ribosomal protein S18~PFAM: Ribosomal protein S18~SPTR: Ribosomal protein S18%3B~TIGRFAM: Ribosomal protein S18~IMG reference gene:2504783639~PFAM: Ribosomal protein S18~TIGRFAM: ribosomal protein S18 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0269 Thena_0270 Thena_0270 Thena_0270 286917 287855 + Protein of unknown function DUF2232%2C membrane InterPro IPR018710~KEGG: ttm:Tthe_2731 protein of unknown function DUF2232%2C membrane~PFAM: Protein of unknown function DUF2232%2C membrane~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783640~PFAM: Predicted membrane protein (DUF2232) gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0270 Thena_0271 Thena_0271 Thena_0271 287896 288354 + 50S ribosomal protein L9 COGs: COG0359 Ribosomal protein L9~HAMAP: Ribosomal protein L9%2C bacteria/chloroplast~InterPro IPR020594:IPR020070:IPR020069~KEGG: 50S ribosomal protein L9~PFAM: Ribosomal protein L9%2C N-terminal%3B Ribosomal protein L9%2C C-terminal~SPTR: 50S ribosomal protein L9%3B~TIGRFAM: Ribosomal protein L9%2C bacteria/chloroplast~IMG reference gene:2504783641~PFAM: Ribosomal protein L9%2C N-terminal domain%3B Ribosomal protein L9%2C C-terminal domain~TIGRFAM: ribosomal protein L9 gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0271 Thena_0272 Thena_0272 Thena_0272 288389 290071 + DNA primase COGs: COG0358 DNA primase~InterProIPR006295:IPR002694:IPR013264:IPR006171:IPR 006154~KEGG: aar:Acear_0692 DNA primase~SPTR: DNA primase%3B~TIGRFAM: DNA primase%2C DnaG~IMG reference gene:2504783642~PFAM: Toprim domain%3B CHC2 zinc finger%3B DNA primase catalytic core%2C N-terminal domain~TIGRFAM: DNA primase%2C catalytic core gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0272 Thena_0273 Thena_0273 Thena_0273 290101 290547 + Uncharacterized protein family UPF0079%2C ATPase COGs: COG0802 ATPase or kinase~InterPro IPR003442~KEGG: fno:Fnod_0408 hypothetical protein~PFAM: Uncharacterised protein family UPF0079%2C ATPase bacteria~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0079%2C ATPase bacteria~IMG reference gene:2504783643~PFAM: Uncharacterised P-loop hydrolase UPF0079~TIGRFAM: ATPase%2C YjeE family gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0273 Thena_0274 Thena_0274 Thena_0274 290562 291155 + peptidase M22 glycoprotease COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone~InterPro IPR000905~KEGG: mmy:MSC_0312 hypothetical protein~PFAM: Peptidase M22%2C glycoprotease~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783644~PFAM: Glycoprotease family gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0274 Thena_0275 Thena_0275 Thena_0275 291169 291642 + GCN5-related N-acetyltransferase COGs: COG0456 Acetyltransferase~InterPro IPR000182~KEGG: sha:SH0983 hypothetical protein~PFAM: GCN5-related N-acetyltransferase~SPTR: Similar to ribosomal protein-alanine N-acetyltransferase%3B~IMG reference gene:2504783645~PFAM: Acetyltransferase (GNAT) family gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0275 Thena_0276 Thena_0276 Thena_0276 291646 294981 - transcription-repair coupling factor COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase)~InterProIPR004576:IPR003711:IPR011545:IPR001650:IPR 005118:IPR014001~KEGG: aar:Acear_0092 transcription-repair coupling factor~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B Transcription factor CarD%3B DNA/RNA helicase%2C C-terminal%3B Transcription-repair-coupling factor~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Transcription-repair coupling factor%3B~TIGRFAM: Transcription-repair coupling factor~IMG reference gene:2504783646~PFAM: Helicase conserved C-terminal domain%3B TRCF domain%3B CarD-like/TRCF domain%3B DEAD/DEAH box helicase~TIGRFAM: transcription-repair coupling factor (mfd) gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0276 Thena_0277 Thena_0277 Thena_0277 295020 295598 - Peptidyl-tRNA hydrolase COGs: COG0193 Peptidyl-tRNA hydrolase~HAMAP: Peptidyl-tRNA hydrolase~InterPro IPR001328~KEGG: tnp:Tnap_1180 peptidyl-tRNA hydrolase~PFAM: Peptidyl-tRNA hydrolase~PRIAM: Aminoacyl-tRNA hydrolase~SPTR: Peptidyl-tRNA hydrolase%3B~TIGRFAM: Peptidyl-tRNA hydrolase~IMG reference gene:2504783647~PFAM: Peptidyl-tRNA hydrolase~TIGRFAM: peptidyl-tRNA hydrolase gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0277 Thena_0278 Thena_0278 Thena_0278 295595 296578 - sodium/calcium exchanger membrane region COGs: COG0530 Ca2+/Na+ antiporter~InterPro IPR004837~KEGG: drm:Dred_2521 sodium/calcium exchanger membrane region~PFAM: Sodium/calcium exchanger membrane region~SPTR: Sodium/calcium exchanger protein%3B~IMG reference gene:2504783648~PFAM: Sodium/calcium exchanger protein gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0278 Thena_0279 Thena_0279 Thena_0279 296600 297049 - GCN5-related N-acetyltransferase COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase~InterPro IPR000182~KEGG: pca:Pcar_2325 acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: N-acetylglutamate synthase%3B~manually curated~IMG reference gene:2504783649~PFAM: Acetyltransferase (GNAT) family gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0279 Thena_0280 Thena_0280 Thena_0280 297079 297432 - phosphopantetheine-protein transferase COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)~InterPro IPR004568:IPR008278~KEGG: saf:SULAZ_0185 holo-[acyl-carrier-protein] synthase~PFAM: 4'-phosphopantetheinyl transferase~SPTR: Holo-[acyl-carrier-protein] synthase%3B~TIGRFAM: Phosphopantethiene-protein transferase~IMG reference gene:2504783650~PFAM: 4'-phosphopantetheinyl transferase superfamily~TIGRFAM: phosphopantethiene--protein transferase domain%3B holo-[acyl-carrier-protein] synthase gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0280 Thena_0281 Thena_0281 Thena_0281 297429 297827 - hypothetical protein IMG reference gene:2504783651 gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0281 Thena_0282 Thena_0282 Thena_0282 297986 298549 + Translation initiation factor IF-3 COGs: COG0290 Translation initiation factor 3 (IF-3)~HAMAP: Translation initiation factor IF-3~InterPro IPR001288:IPR019814:IPR019815~KEGG: translation initiation factor IF-3~PFAM: Translation initiation factor 3%2C N-terminal%3B Translation initiation factor 3%2C C-terminal~SPTR: Translation initiation factor IF-3%3B~TIGRFAM: Translation initiation factor 3~IMG reference gene:2504783652~PFAM: Translation initiation factor IF-3%2C C-terminal domain%3B Translation initiation factor IF-3%2C N-terminal domain~TIGRFAM: translation initiation factor IF-3 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0282 Thena_0283 Thena_0283 Thena_0283 298542 298748 + 50S ribosomal protein L35 COGs: COG0291 Ribosomal protein L35~HAMAP: Ribosomal protein L35~InterPro IPR001706~KEGG: syr:SynRCC307_0060 50S ribosomal protein L35~PFAM: Ribosomal protein L35~SPTR: 50S ribosomal protein L35%3B~TIGRFAM: Ribosomal protein L35~IMG reference gene:2504783653~PFAM: Ribosomal protein L35~TIGRFAM: ribosomal protein L35 gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0283 Thena_0284 Thena_0284 Thena_0284 298770 299117 + 50S ribosomal protein L20 COGs: COG0292 Ribosomal protein L20~HAMAP: Ribosomal protein L20~InterPro IPR005813~KEGG: 50S ribosomal protein L20~PFAM: Ribosomal protein L20~SPTR: 50S ribosomal protein L20%3B~TIGRFAM: Ribosomal protein L20~IMG reference gene:2504783654~PFAM: Ribosomal protein L20~TIGRFAM: ribosomal protein L20 gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0284 Thena_0285 Thena_0285 Thena_0285 299122 299883 + tRNA/rRNA methyltransferase (SpoU) COGs: COG0566 rRNA methylase~InterPro IPR013123:IPR001537~KEGG: cbk:CLL_A2474 RNA methyltransferase%2C TrmH family~PFAM: tRNA/rRNA methyltransferase%2C SpoU%3B RNA 2-O ribose methyltransferase%2C substrate binding~SPTR: tRNA/rRNA methyltransferase%3B~IMG reference gene:2504783655~PFAM: SpoU rRNA Methylase family gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0285 Thena_0286 Thena_0286 Thena_0286 299967 300479 + hypothetical protein KEGG: pph:Ppha_1729 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783656 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0286 Thena_0287 Thena_0287 Thena_0287 300580 302457 + carbon starvation protein CstA COGs: COG1966 Carbon starvation protein predicted membrane protein~InterPro IPR003706~KEGG: tye:THEYE_A1642 putative carbon starvation protein A~PFAM: Carbon starvation protein CstA~SPTR: Carbon starvation protein%2C CstA family%3B~IMG reference gene:2504783657~PFAM: Carbon starvation protein CstA gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0287 Thena_0288 Thena_0288 Thena_0288 302555 303523 + UDP-glucose 4-epimerase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: kol:Kole_0202 NAD-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: UDP-glucose 4-epimerase~SPTR: RmlD substrate binding domain protein%3B~IMG reference gene:2504783658~PFAM: NAD dependent epimerase/dehydratase family gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0288 Thena_0289 Thena_0289 Thena_0289 303538 304710 - homocitrate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR013477:IPR000891~KEGG: slp:Slip_0508 homocitrate synthase~PFAM: Pyruvate carboxyltransferase~PRIAM: (R)-citramalate synthase~SPTR: Homocitrate synthase%3B~TIGRFAM: Homocitrate synthase NifV-type~IMG reference gene:2504783659~PFAM: HMGL-like~TIGRFAM: homocitrate synthase NifV gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0289 Thena_0290 Thena_0290 Thena_0290 304885 305625 + ABC transporter related protein COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component~InterPro IPR003439:IPR003593~KEGG: tye:THEYE_A0164 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter-like~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter%2C ATP-binding protein%3B~IMG reference gene:2504783660~PFAM: ABC transporter~TIGRFAM: FeS assembly ATPase SufC gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0290 Thena_0291 Thena_0291 Thena_0291 305616 306866 + SufBD protein COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component~InterPro IPR000825~KEGG: tye:THEYE_A0165 SufB/SufD domain protein~PFAM: SUF system FeS cluster assembly%2C SufBD~SPTR: SufB/sufD domain protein%3B~IMG reference gene:2504783661~PFAM: Uncharacterized protein family (UPF0051) gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0291 Thena_0292 Thena_0292 Thena_0292 306866 307705 + Pantothenate synthetase COGs: COG0414 Panthothenate synthetase~HAMAP: Pantoate-beta-alanine ligase~InterPro IPR003721~KEGG: pantoate/beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase~SPTR: Pantothenate synthetase%3B~TIGRFAM: Pantoate-beta-alanine ligase~IMG reference gene:2504783662~PFAM: Pantoate-beta-alanine ligase~TIGRFAM: pantoate--beta-alanine ligase gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0292 Thena_0293 Thena_0293 Thena_0293 307706 308665 + polysaccharide pyruvyl transferase COGs: COG2327 conserved hypothetical protein~InterPro IPR007345~KEGG: dth:DICTH_1302 CsaB protein~PFAM: Polysaccharide pyruvyl transferase~SPTR: CsaB protein%3B~IMG reference gene:2504783663~PFAM: Polysaccharide pyruvyl transferase~TIGRFAM: polysaccharide pyruvyl transferase CsaB gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0293 Thena_0294 Thena_0294 Thena_0294 308670 309389 + glycosyl transferase%2C WecB/TagA/CpsF family COGs: COG1922 Teichoic acid biosynthesis protein~InterPro IPR004629~KEGG: chy:CHY_2585 WecB/TagA/CpsF family glycosyl transferase~PFAM: Glycosyl transferase WecB/TagA/CpsF~PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase~SPTR: Glycosyl transferase%2C WecB/TagA/CpsF family%3B~TIGRFAM: Glycosyl transferase WecB/TagA/CpsF~IMG reference gene:2504783664~PFAM: Glycosyl transferase WecB/TagA/CpsF family~TIGRFAM: bacterial polymer biosynthesis proteins%2C WecB/TagA/CpsF family gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0294 Thena_0295 Thena_0295 Thena_0295 309394 310119 + oxidoreductase FAD/NAD(P)-binding domain protein COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase~InterPro IPR008333:IPR001433:IPR019480~KEGG: hya:HY04AAS1_1553 oxidoreductase FAD/NAD(P)-binding domain protein~PFAM: Oxidoreductase FAD/NAD(P)-binding%3B Oxidoreductase FAD-binding region%3B Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulphur cluster binding domain~SPTR: Dihydroorotate dehydrogenase electron transfer subunit%3B~IMG reference gene:2504783665~PFAM: Oxidoreductase FAD-binding domain%3B Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B%3B Oxidoreductase NAD-binding domain gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0295 Thena_0296 Thena_0296 Thena_0296 310349 311716 + Integrase catalytic region InterPro IPR001584~KEGG: dau:Daud_1501 integrase catalytic subunit~PFAM: Integrase%2C catalytic core~SPTR: Integrase%2C catalytic region%3B~IMG reference gene:2504783667~PFAM: Integrase core domain gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0296 Thena_0297 Thena_0297 Thena_0297 311738 312202 - CMP/dCMP deaminase zinc-binding protein COGs: COG0590 Cytosine/adenosine deaminase~InterPro IPR002125~KEGG: ssp:SSP2156 putative cytosine adenosine deaminase~PFAM: CMP/dCMP deaminase%2C zinc-binding~SPTR: Putative cytosine adenosine deaminase%3B~IMG reference gene:2504783668~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0297 Thena_0298 Thena_0298 Thena_0298 312319 313113 + hypothetical protein KEGG: nve:NEMVE_v1g201621 hypothetical protein~IMG reference gene:2504783669 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0298 Thena_0299 Thena_0299 Thena_0299 313217 313675 + pseudogene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0299 Thena_0300 Thena_0300 Thena_0300 313686 314240 + NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: chy:CHY_1800 hypothetical protein~PFAM: NADPH-dependent FMN reductase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783671~PFAM: NADPH-dependent FMN reductase gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0300 Thena_0301 Thena_0301 Thena_0301 314237 315613 + mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase COGs: COG0836 Mannose-1-phosphate guanylyltransferase~InterPro IPR006375:IPR005835:IPR001538~KEGG: mfs:MFS40622_0607 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~PFAM: Nucleotidyl transferase%3B Mannose-6-phosphate isomerase%2C type II%2C C-terminal~PRIAM: Mannose-1-phosphate guanylyltransferase~SPTR: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase%3B~TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~IMG reference gene:2504783672~PFAM: Nucleotidyl transferase%3B Mannose-6-phosphate isomerase~TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0301 Thena_0302 Thena_0302 Thena_0302 315672 317555 + O-antigen polymerase COGs: COG3307 Lipid A core - O-antigen ligase~InterPro IPR007016:IPR013105:IPR019734~KEGG: fjo:Fjoh_2813 O-antigen polymerase~PFAM: O-antigen ligase-related%3B Tetratricopeptide TPR2~SMART: Tetratricopeptide repeat~SPTR: Predicted protein%3B~IMG reference gene:2504783673~PFAM: O-Antigen ligase gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0302 Thena_0303 Thena_0303 Thena_0303 317521 318801 - 5-methylthioadenosine/S-adenosylhomocysteinedeaminase COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase~HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase~InterPro IPR006680~KEGG: saf:SULAZ_1366 atrazine chlorohydrolase~PFAM: Amidohydrolase 1~PRIAM: S-adenosylhomocysteine deaminase~SPTR: Atrazine chlorohydrolase%3B~IMG reference gene:2504783674~PFAM: Amidohydrolase family gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0303 Thena_0304 Thena_0304 Thena_0304 318933 320657 + type II secretion system protein E COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB~InterPro IPR007831:IPR001482:IPR003593~KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB~PFAM: Type II secretion system protein E%3B General secretory system II%2C protein E%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Type IV pilus assembly protein PilB%3B~IMG reference gene:2504783675~PFAM: Type II/IV secretion system protein%3B GSPII_E N-terminal domain gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0304 Thena_0305 Thena_0305 Thena_0305 320666 321724 + twitching motility protein COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT~InterPro IPR006321:IPR001482:IPR003593~KEGG: dth:DICTH_0722 type IV pilus retraction protein PilT~PFAM: Type II secretion system protein E~SMART: ATPase%2C AAA+ type%2C core~SPTR: Type IV pilus retraction protein PilT%3B~TIGRFAM: Pilus retraction protein PilT~IMG reference gene:2504783676~PFAM: Type II/IV secretion system protein~TIGRFAM: pilus retraction protein PilT gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0305 Thena_0306 Thena_0306 Thena_0306 321724 322968 + Type II secretion system F domain protein COGs: COG1459 Type II secretory pathway component PulF~InterPro IPR018076~KEGG: sfu:Sfum_0118 type II secretion system protein~PFAM: Type II secretion system F domain~SPTR: Type II secretion system protein%3B~IMG reference gene:2504783677~PFAM: Bacterial type II secretion system protein F domain gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0306 Thena_0307 Thena_0307 Thena_0307 323117 323515 + hypothetical protein COGs: COG4968 Tfp pilus assembly protein PilE~InterPro IPR012902~KEGG: rxy:Rxyl_1158 Tfp pilus assembly protein PilE~SPTR: Tfp pilus assembly protein PilE%3B~IMG reference gene:2504783678~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0307 Thena_0308 Thena_0308 Thena_0308 323585 323986 + protein of unknown function UPF0047 COGs: COG0432 conserved hypothetical protein~InterPro IPR001602~KEGG: tye:THEYE_A0136 hypothetical protein~PFAM: Uncharacterised protein family UPF0047~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0047~IMG reference gene:2504783679~PFAM: Uncharacterised protein family UPF0047~TIGRFAM: secondary thiamine-phosphate synthase enzyme gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0308 Thena_0309 Thena_0309 Thena_0309 323983 324501 - hypothetical protein SPTR: Genome sequencing data%2C contig C327%3B~IMG reference gene:2504783680 gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0309 Thena_0310 Thena_0310 Thena_0310 324688 325065 - hypothetical protein IMG reference gene:2504783681 gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0310 Thena_0311 Thena_0311 Thena_0311 325109 325714 - hypothetical protein KEGG: bhy:BHWA1_01695 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783682 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0311 Thena_0312 Thena_0312 Thena_0312 325875 327281 + glutamyl-tRNA synthetase COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~InterPro IPR004527:IPR020058~KEGG: dtu:Dtur_1273 glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain~PRIAM: Glutamate--tRNA ligase~SPTR: Glutamyl-tRNA synthetase%3B~TIGRFAM: Glutamyl-tRNA synthetase%2C class Ic%2C bacterial/mitochondrial~IMG reference gene:2504783683~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain~TIGRFAM: glutamyl-tRNA synthetase%2C bacterial family gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0312 Thena_0313 Thena_0313 Thena_0313 327291 328376 + protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: tjr:TherJR_1906 protein of unknown function UPF0118~PFAM: Uncharacterised protein family UPF0118~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783684~PFAM: Domain of unknown function DUF20 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0313 Thena_0314 Thena_0314 Thena_0314 328373 329860 - Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590~KEGG: pfu:PF0755 non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase~PFAM: Aldehyde dehydrogenase~SPTR: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase%3B~IMG reference gene:2504783685~PFAM: Aldehyde dehydrogenase family gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0314 Thena_0315 Thena_0315 Thena_0315 329865 330440 - Appr-1-p processing domain protein COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1~InterPro IPR002589~KEGG: tye:THEYE_A0845 hypothetical protein~PFAM: Appr-1-p processing~SMART: Appr-1-p processing~SPTR: Conserved protein%3B~IMG reference gene:2504783686~PFAM: Macro domain gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0315 Thena_0316 Thena_0316 Thena_0316 330566 330979 + hypothetical protein IMG reference gene:2504783687 gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0316 Thena_0317 Thena_0317 Thena_0317 330980 331606 + N-glycosylase/DNA lyase COGs: COG1059 Thermostable 8-oxoguanine DNA glycosylase~HAMAP: N-glycosylase/DNA lyase~InterPro IPR003265~KEGG: trq:TRQ2_1000 N-glycosylase/DNA lyase~PFAM: HhH-GPD domain~PRIAM: DNA-(apurinic or apyrimidinic site) lyase~SMART: HhH-GPD domain~SPTR: Probable N-glycosylase/DNA lyase%3B~IMG reference gene:2504783688 gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0317 Thena_0318 Thena_0318 Thena_0318 331603 332370 + Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase COGs: COG0388 amidohydrolase~InterPro IPR003010~KEGG: ccb:Clocel_3108 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase%3B~IMG reference gene:2504783689~PFAM: Carbon-nitrogen hydrolase gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0318 Thena_0319 Thena_0319 Thena_0319 332505 332624 + pseudogene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0319 Thena_0320 Thena_0320 Thena_0320 332847 333671 + protein of unknown function DUF169 InterPro IPR003748~KEGG: tye:THEYE_A1616 hypothetical protein~PFAM: Protein of unknown function DUF169~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783691~PFAM: Uncharacterised ArCR%2C COG2043 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0320 Thena_0321 Thena_0321 Thena_0321 338987 340903 - diguanylate cyclase with PAS/PAC sensor COGs: COG2199 FOG: GGDEF domain~InterPro IPR000014:IPR000160~KEGG: dau:Daud_0417 diguanylate cyclase with PAS/PAC sensor~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504783697~PFAM: GGDEF domain~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0321 Thena_0322 Thena_0322 Thena_0322 340975 342474 + hypothetical protein IMG reference gene:2504783698 gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0322 Thena_0323 Thena_0323 Thena_0323 342471 343298 - Tetratricopeptide TPR_2 repeat-containing protein InterPro IPR019734:IPR013105~KEGG: ptm:GSPATT00026081001 hypothetical protein~PFAM: Tetratricopeptide TPR2~SPTR: Chromosome undetermined scaffold_91%2C whole genome shotgun sequence%3B~IMG reference gene:2504783699 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0323 Thena_0324 Thena_0324 Thena_0324 343310 345163 - WD40 repeat-containing protein InterPro IPR001680:IPR019781~KEGG: npu:Npun_F1419 WD-40 repeat-containing protein~PFAM: WD40 repeat%2C subgroup~SMART: WD40 repeat~SPTR: WD-repeat protein%2C putative%3B~IMG reference gene:2504783700~PFAM: WD domain%2C G-beta repeat gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0324 Thena_0325 Thena_0325 Thena_0325 345170 346690 - CHAD domain containing protein COGs: COG3025 conserved hypothetical protein~InterPro IPR008172:IPR007899~KEGG: meh:M301_2478 CHAD domain containing protein~PFAM: CHAD%3B Adenylate cyclase~SPTR: CHAD domain containing protein%3B~IMG reference gene:2504783701~PFAM: CYTH domain%3B CHAD domain gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0325 Thena_0326 Thena_0326 Thena_0326 346769 348301 - Ppx/GppA phosphatase COGs: COG0248 Exopolyphosphatase~InterPro IPR003695:IPR006674~KEGG: drm:Dred_1179 Ppx/GppA phosphatase~PFAM: Ppx/GppA phosphatase%3B Metal-dependent phosphohydrolase%2C HD region%2C subdomain~PRIAM: Guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase~SPTR: Ppx/GppA phosphatase%3B~IMG reference gene:2504783702~PFAM: HD domain%3B Ppx/GppA phosphatase family gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0326 Thena_0327 Thena_0327 Thena_0327 348303 350468 - Polyphosphate kinase COGs: COG0855 Polyphosphate kinase~HAMAP: Polyphosphate kinase~InterPro IPR003414~KEGG: hmo:HM1_0232 polyphosphate kinase~PFAM: Polyphosphate kinase~PRIAM: Polyphosphate kinase~SPTR: Polyphosphate kinase%3B~TIGRFAM: polyphosphate kinase 1~IMG reference gene:2504783703~PFAM: Polyphosphate kinase~TIGRFAM: polyphosphate kinase 1 gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0327 Thena_0328 Thena_0328 Thena_0328 350472 352040 - Ppx/GppA phosphatase COGs: COG0248 Exopolyphosphatase~InterPro IPR003695~KEGG: cst:CLOST_0905 ppx1~PFAM: Ppx/GppA phosphatase~SPTR: Ppx1%3B~IMG reference gene:2504783704~PFAM: HD domain%3B Ppx/GppA phosphatase family gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0328 Thena_0329 Thena_0329 Thena_0329 352045 352251 - hypothetical protein IMG reference gene:2504783705 gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0329 Thena_0330 Thena_0330 Thena_0330 352379 352810 - hypothetical protein IMG reference gene:2504783707~PFAM: PEGA domain gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0330 Thena_0331 Thena_0331 Thena_0331 352934 354079 - YibE/F family protein COGs: COG5438 multitransmembrane protein~InterPro IPR012507~KEGG: amt:Amet_0543 YibE/F family protein~PFAM: YibE/F-like~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783708~PFAM: YibE/F-like protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0331 Thena_0332 Thena_0332 Thena_0332 354086 355174 - DNA integrity scanning%2C DisA%2C linker region COGs: COG1623 nucleic-acid-binding protein (contains the HHH domain)~InterPro IPR003390:IPR018906~KEGG: tjr:TherJR_0249 DNA integrity scanning%2C DisA%2C linker region~PFAM: DNA integrity scanning%2C DisA%2C linker region%3B DNA integrity scanning protein%2C DisA%2C N-terminal~SPTR: DNA integrity scanning%2C DisA%2C linker region%3B~IMG reference gene:2504783709~PFAM: DisA bacterial checkpoint controller nucleotide-binding%3B DisA bacterial checkpoint controller linker region gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0332 Thena_0333 Thena_0333 Thena_0333 355138 356508 - DNA repair protein RadA COGs: COG1066 ATP-dependent serine protease~InterPro IPR004504:IPR003593~KEGG: DNA repair protein RadA~SMART: ATPase%2C AAA+ type%2C core~SPTR: DNA repair protein RadA%3B~TIGRFAM: DNA repair protein RadA~IMG reference gene:2504783710~PFAM: KaiC~TIGRFAM: DNA repair protein RadA gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0333 Thena_0334 Thena_0334 Thena_0334 356477 358915 - ATPase AAA-2 domain protein COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489~KEGG: cya:CYA_0656 Clp protease%2C ATP-binding subunit ClpC~PFAM: ATPase associated with various cellular activities%2C AAA-2%3B Clp%2C N-terminal%3B ATPase%2C AAA-type%2C core%3B UvrB/UvrC protein%3B Clp ATPase%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Clp protease%2C ATP-binding subunit ClpC%3B~IMG reference gene:2504783711~PFAM: AAA domain (Cdc48 subfamily)%3B Clp amino terminal domain%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ATPase family associated with various cellular activities (AAA) gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0334 Thena_0335 Thena_0335 Thena_0335 359241 360161 + ADP-L-glycero-D-manno-heptose-6-epimerase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR011912:IPR001509~KEGG: aae:aq_344 ADP-L-glycero-D-manno-heptose-6-epimerase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: ADP-glyceromanno-heptose 6-epimerase~SPTR: ADP-L-glycero-D-manno-heptose-6-epimerase%3B~TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase~IMG reference gene:2504783712~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0335 Thena_0336 Thena_0336 Thena_0336 360510 361580 + hydrogenase (NiFe) small subunit HydA COGs: COG1740 Ni Fe-hydrogenase I small subunit~InterPro IPR001821:IPR006311:IPR006137~KEGG: tjr:TherJR_0257 hydrogenase (NiFe) small subunit HydA~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~PRIAM: Hydrogenase (acceptor)~SPTR: Hydrogenase (NiFe) small subunit HydA%3B~TIGRFAM: [Ni-Fe]-hydrogenase%2C small subunit%3B Twin-arginine translocation pathway%2C signal sequence~IMG reference gene:2504783713~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit~TIGRFAM: hydrogenase (NiFe) small subunit (hydA)%3B Tat (twin-arginine translocation) pathway signal sequence gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0336 Thena_0337 Thena_0337 Thena_0337 361583 363145 + Cytochrome-c3 hydrogenase COGs: COG0374 Ni Fe-hydrogenase I large subunit~InterPro IPR001501~KEGG: tjr:TherJR_0258 nickel-dependent hydrogenase large subunit~PFAM: Nickel-dependent hydrogenase%2C large subunit~PRIAM: Cytochrome-c3 hydrogenase~SPTR: Nickel-dependent hydrogenase large subunit%3B~IMG reference gene:2504783714~PFAM: Nickel-dependent hydrogenase gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0337 Thena_0338 Thena_0338 Thena_0338 363157 363738 + Ni/Fe-hydrogenase%2C b-type cytochrome subunit COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit~InterPro IPR000516:IPR011577~KEGG: tjr:TherJR_0259 Ni/Fe-hydrogenase%2C b-type cytochrome subunit~SPTR: Ni/Fe-hydrogenase%2C b-type cytochrome subunit%3B~TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit~IMG reference gene:2504783715~PFAM: Cytochrome b(N-terminal)/b6/petB~TIGRFAM: Ni/Fe-hydrogenase%2C b-type cytochrome subunit gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0338 Thena_0339 Thena_0339 Thena_0339 363834 364364 + hypothetical protein KEGG: drt:Dret_0608 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783716~PFAM: SprA-related family gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0339 Thena_0340 Thena_0340 Thena_0340 364517 364999 + hydrogenase maturation protease COGs: COG0680 Ni Fe-hydrogenase maturation factor~InterPro IPR000671~KEGG: hth:HTH_1011 hydrogenase maturation protease~PFAM: Peptidase A31%2C hydrogen uptake protein~SPTR: Hydrogenase expression/formation protein%3B~TIGRFAM: Peptidase A31%2C hydrogen uptake protein~IMG reference gene:2504783717~PFAM: Hydrogenase maturation protease~TIGRFAM: hydrogenase expression/formation protein%3B hydrogenase maturation protease gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0340 Thena_0341 Thena_0341 Thena_0341 365008 367143 + CoA-binding domain protein COGs: COG1042 Acyl-CoA synthetase (NDP forming)~InterPro IPR003781~KEGG: mja:MJ_0590 hypothetical protein~PFAM: CoA-binding~SPTR: Uncharacterized protein MJ0590%3B~IMG reference gene:2504783718~PFAM: CoA binding domain~TIGRFAM: acetyl coenzyme A synthetase (ADP forming)%2C alpha domain gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0341 Thena_0342 Thena_0342 Thena_0342 367140 367805 + hypothetical protein KEGG: kol:Kole_2162 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783719 gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0342 Thena_0343 Thena_0343 Thena_0343 367809 368033 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: kol:Kole_2161 4Fe-4S ferredoxin iron-sulfur binding domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504783720~PFAM: 4Fe-4S binding domain gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0343 Thena_0344 Thena_0344 Thena_0344 368058 369110 + 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880~KEGG: kol:Kole_2160 2-ketoisovalerate ferredoxin reductase~PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal~PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin)~SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B~IMG reference gene:2504783721~PFAM: domain gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0344 Thena_0345 Thena_0345 Thena_0345 369113 369862 + 2-oxoglutarate synthase COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766~KEGG: tit:Thit_1912 thiamine pyrophosphate protein domain protein TPP-binding protein~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: 2-oxoglutarate synthase~SPTR: Thiamine pyrophosphate protein domain protein TPP-binding%3B~IMG reference gene:2504783722~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0345 Thena_0346 Thena_0346 Thena_0346 369855 370397 + Pyruvate/ketoisovalerate oxidoreductase COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: tjr:TherJR_1676 pyruvate/ketoisovalerate oxidoreductase~PFAM: Pyruvate/ketoisovalerate oxidoreductase~SPTR: Pyruvate/ketoisovalerate oxidoreductase%3B~IMG reference gene:2504783723~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0346 Thena_0347 Thena_0347 Thena_0347 370411 371583 - glycerate kinase COGs: COG1929 Glycerate kinase~InterPro IPR004381~KEGG: ppd:Ppro_2915 glycerate kinase~PFAM: Glycerate kinase~PRIAM: Glycerate kinase~SPTR: Glycerate kinase%3B~TIGRFAM: Glycerate kinase~IMG reference gene:2504783724~PFAM: Glycerate kinase family~TIGRFAM: glycerate kinase gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0347 Thena_0348 Thena_0348 Thena_0348 371712 372740 + Aminodeoxychorismate synthase COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I~InterPro IPR015890~KEGG: ddf:DEFDS_1304 para-aminobenzoate synthase component I~PFAM: Chorismate binding%2C C-terminal~PRIAM: Aminodeoxychorismate synthase~SPTR: Para-aminobenzoate synthase component I%3B~IMG reference gene:2504783725~PFAM: chorismate binding enzyme gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0348 Thena_0349 Thena_0349 Thena_0349 372724 373326 + hypothetical protein KEGG: hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783726~PFAM: Aminotransferase class IV gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0349 Thena_0350 Thena_0350 Thena_0350 373357 374337 + hypothetical protein SPTR: NADH dehydrogenase subunit 2%3B~IMG reference gene:2504783727 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0350 Thena_0351 Thena_0351 Thena_0351 374316 375479 + sodium/hydrogen exchanger COGs: COG0475 Kef-type K+ transport systems membrane components~InterPro IPR006153~KEGG: hau:Haur_4248 sodium/hydrogen exchanger~PFAM: Cation/H+ exchanger~SPTR: Sodium/hydrogen exchanger%3B~IMG reference gene:2504783728~PFAM: Sodium/hydrogen exchanger family gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0351 Thena_0352 Thena_0352 Thena_0352 375508 375837 + hypothetical protein IMG reference gene:2504783729 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0352 Thena_0353 Thena_0353 Thena_0353 375840 376451 + SUA5/yciO/yrdC domain protein COGs: COG0009 Putative translation factor (SUA5)~InterPro IPR006070~KEGG: tad:TRIADDRAFT_35031 hypothetical protein~PFAM: Sua5/YciO/YrdC%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783730~PFAM: yrdC domain~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0353 Thena_0354 Thena_0354 Thena_0354 376474 377724 + Glycine hydroxymethyltransferase COGs: COG0112 Glycine/serine hydroxymethyltransferase~InterPro IPR001085~KEGG: aae:aq_479 serine hydroxymethyltransferase~PFAM: Serine hydroxymethyltransferase~PRIAM: Glycine hydroxymethyltransferase~SPTR: Serine hydroxymethyltransferase%3B~IMG reference gene:2504783731~PFAM: Serine hydroxymethyltransferase gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0354 Thena_0355 Thena_0355 Thena_0355 377721 378275 + metal dependent phosphohydrolase COGs: COG2316 hydrolase (HD superfamily)~InterPro IPR006675:IPR006674~KEGG: nth:Nther_2011 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: HDIG~IMG reference gene:2504783732~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0355 Thena_0356 Thena_0356 Thena_0356 378305 378517 - Domain of unknown function DUF1858 InterPro IPR015077~KEGG: mta:Moth_2496 hypothetical protein~PFAM: Domain of unknown function DUF1858~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783733~PFAM: Domain of unknown function (DUF1858)~TIGRFAM: hydrid cluster protein-associated redox disulfide domain gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0356 Thena_0357 Thena_0357 Thena_0357 378737 379603 + Methylenetetrahydrofolate reductase (NAD(P)H) COGs: COG0685 5 10-methylenetetrahydrofolate reductase~InterPro IPR003171~KEGG: pmx:PERMA_0068 5%2C10-methylenetetrahydrofolate reductase~PFAM: Methylenetetrahydrofolate reductase~PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H)~SPTR: 5%2C10-methylenetetrahydrofolate reductase%3B~IMG reference gene:2504783734~PFAM: Methylenetetrahydrofolate reductase~TIGRFAM: 5%2C10-methylenetetrahydrofolate reductase%2C prokaryotic form gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0357 Thena_0358 Thena_0358 Thena_0358 379672 380103 + hypothetical protein IMG reference gene:2504783735~PFAM: Bacterial DNA-binding protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0358 Thena_0359 Thena_0359 Thena_0359 380135 380776 + Rhomboid family protein COGs: COG0705 membrane protein~InterPro IPR002610~KEGG: dap:Dacet_0423 rhomboid family protein~PFAM: Peptidase S54%2C rhomboid~SPTR: Rhomboid family protein%3B~IMG reference gene:2504783736~PFAM: Rhomboid family gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0359 Thena_0360 Thena_0360 Thena_0360 380785 381156 - putative signal transduction protein with CBS domains COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains~InterPro IPR000644~KEGG: cyc:PCC7424_2061 protein of unknown function CP12~PFAM: Cystathionine beta-synthase%2C core~SMART: Cystathionine beta-synthase%2C core~SPTR: CP12 domain protein%3B~IMG reference gene:2504783737~PFAM: CBS domain gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0360 Thena_0361 Thena_0361 Thena_0361 381202 381903 - 1-acyl-sn-glycerol-3-phosphate acyltransferase COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase~InterPro IPR004552:IPR002123~KEGG: gur:Gura_4396 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: Phospholipid/glycerol acyltransferase~SMART: Phospholipid/glycerol acyltransferase~SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase%3B~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase~IMG reference gene:2504783738~PFAM: Acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0361 Thena_0362 Thena_0362 Thena_0362 381952 382371 + hypothetical protein KEGG: bha:BH3244 general stress protein~SPTR: General stress protein%3B~IMG reference gene:2504783739 gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0362 Thena_0363 Thena_0363 Thena_0363 382371 382829 + hypothetical protein IMG reference gene:2504783740 gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0363 Thena_0364 Thena_0364 Thena_0364 382848 383219 - protein of unknown function CGGC region COGs: COG5561 metal-binding protein~InterPro IPR014925~KEGG: tye:THEYE_A1863 hypothetical protein~PFAM: Protein of unknown function%2C CGGC domain~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783741~PFAM: CGGC domain gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0364 Thena_0365 Thena_0365 Thena_0365 383432 383713 + hypothetical protein IMG reference gene:2504783742 gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0365 Thena_0366 Thena_0366 Thena_0366 383716 385020 - major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: nde:NIDE1155 major facilitator superfamily transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily transporter%3B~IMG reference gene:2504783743~PFAM: Sugar (and other) transporter gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0366 Thena_0367 Thena_0367 Thena_0367 385515 386051 + hypothetical protein KEGG: hypothetical protein~SPTR: Peptidyl-prolyl cis-trans isomerase%3B~IMG reference gene:2504783745~TIGRFAM: peptidyl-prolyl cis-trans isomerase%2C EpsD family gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0367 Thena_0368 Thena_0368 Thena_0368 386180 387046 + hypothetical protein KEGG: hya:HY04AAS1_0184 hypothetical protein~SPTR: Conserved hypothetical membrane protein%3B~IMG reference gene:2504783746 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0368 Thena_0369 Thena_0369 Thena_0369 387084 387431 + Cupin 2 conserved barrel domain protein COGs: COG0662 Mannose-6-phosphate isomerase~InterPro IPR013096~KEGG: tnp:Tnap_1511 cupin 2 conserved barrel domain protein~PFAM: Cupin 2%2C conserved barrel~SPTR: Cupin 2%2C conserved barrel domain protein%3B~IMG reference gene:2504783747~PFAM: Cupin domain gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0369 Thena_0370 Thena_0370 Thena_0370 387441 388118 + Nitrite reductase (NAD(P)H) COGs: COG1251 NAD(P)H-nitrite reductase~InterPro IPR005117:IPR006067~KEGG: mem:Memar_1210 nitrite and sulphite reductase 4Fe-4S region~PFAM: Nitrite/sulphite reductase 4Fe-4S region%3B Nitrite/sulphite reductase%2C hemoprotein beta-component%2C ferrodoxin-like~PRIAM: Nitrite reductase (NAD(P)H)~SPTR: Nitrite and sulphite reductase 4Fe-4S region%3B~IMG reference gene:2504783748~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0370 Thena_0371 Thena_0371 Thena_0371 388166 388579 - UspA domain-containing protein InterPro IPR006016~KEGG: iho:Igni_0255 UspA domain-containing protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504783749~PFAM: Universal stress protein family gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0371 Thena_0372 Thena_0372 Thena_0372 388789 389658 + hypothetical protein IMG reference gene:2504783750 gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0372 Thena_0373 Thena_0373 Thena_0373 389642 390214 - NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: mba:Mbar_A1385 iron-sulfur flavoprotein~PFAM: NADPH-dependent FMN reductase~SPTR: Iron-sulfur flavoprotein%3B~IMG reference gene:2504783751~PFAM: NADPH-dependent FMN reductase gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0373 Thena_0374 Thena_0374 Thena_0374 390235 390828 - NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: mmq:MmarC5_1142 NADPH-dependent FMN reductase~PFAM: NADPH-dependent FMN reductase~SPTR: NADPH-dependent FMN reductase%3B~IMG reference gene:2504783752~PFAM: NADPH-dependent FMN reductase gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0374 Thena_0375 Thena_0375 Thena_0375 390914 391324 + hypothetical protein IMG reference gene:2504783753 gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0375 Thena_0376 Thena_0376 Thena_0376 391327 391833 - hypothetical protein KEGG: nla:NLA_1360 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783754 gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0376 Thena_0377 Thena_0377 Thena_0377 391960 393366 + glycoside hydrolase family 18 COGs: COG3858 glycosyl hydrolase~InterPro IPR011583:IPR001223~KEGG: bbe:BBR47_10680 hypothetical protein~PFAM: Glycoside hydrolase%2C family 18%2C catalytic domain~SMART: Chitinase II~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783755~PFAM: Glycosyl hydrolases family 18 gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0377 Thena_0378 Thena_0378 Thena_0378 393356 393736 + hypothetical protein IMG reference gene:2504783756 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0378 Thena_0379 Thena_0379 Thena_0379 393810 394484 + Tetratricopeptide TPR_2 repeat-containing protein InterPro IPR019734:IPR006597:IPR013105~PFAM: Tetratricopeptide TPR2~SMART: Tetratricopeptide repeat%3B Sel1-like~IMG reference gene:2504783757~PFAM: Tetratricopeptide repeat gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0379 Thena_0380 Thena_0380 Thena_0380 394700 395551 + protein of unknown function DUF347 COGs: COG4705 Uncharacterized membrane-anchored protein~InterPro IPR007136~KEGG: ppy:PPE_02227 uncharacterized membrane-anchored protein conserved in bacteria~PFAM: Protein of unknown function DUF347~SPTR: Integral membrane protein%3B~IMG reference gene:2504783758~PFAM: Repeat of Unknown Function (DUF347) gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0380 Thena_0381 Thena_0381 Thena_0381 395688 396103 - pseudogene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0381 Thena_0382 Thena_0382 Thena_0382 396153 396914 - protein of unknown function DUF81 InterPro IPR002781~KEGG: tye:THEYE_A1866 hypothetical membrane protein%2C conserved%2C DUF81 family~PFAM: Protein of unknown function DUF81~SPTR: Hypothetical membrane protein%2C conserved%2C DUF81 family%3B~IMG reference gene:2504783760~PFAM: Sulfite exporter TauE/SafE gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0382 Thena_0383 Thena_0383 Thena_0383 396988 397602 - formylmethanofuran dehydrogenase subunit E region COGs: COG2191 Formylmethanofuran dehydrogenase subunit E~InterPro IPR003814~KEGG: cte:CT1717 tungsten formylmethanofuran dehydrogenase%2C subunit E%2C putative~PFAM: Formylmethanofuran dehydrogenase%2C subunit E region~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783761~PFAM: Prokaryotic dksA/traR C4-type zinc finger%3B FmdE%2C Molybdenum formylmethanofuran dehydrogenase operon gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0383 Thena_0384 Thena_0384 Thena_0384 397796 398071 - plasmid stabilization system protein KEGG: nis:NIS_1330 plasmid stabilization system protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783762~PFAM: Plasmid maintenance system killer protein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0384 Thena_0385 Thena_0385 Thena_0385 398083 398325 - prevent-host-death family protein InterPro IPR006442~KEGG: ddf:DEFDS_0390 prevent-host-death family protein~SPTR: Prevent-host-death family protein%3B~TIGRFAM: Prevent-host-death protein~IMG reference gene:2504783763~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0385 Thena_0386 Thena_0386 Thena_0386 398425 398592 + pseudogene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0386 Thena_0387 Thena_0387 Thena_0387 398597 398827 - Protein of unknown function DUF2283 InterPro IPR019270~KEGG: tba:TERMP_02061 hypothetical protein~PFAM: Protein of unknown function DUF2283~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783765~PFAM: Protein of unknown function (DUF2283) gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0387 Thena_0388 Thena_0388 Thena_0388 398940 399902 + hypothetical protein KEGG: saf:SULAZ_0136 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783766~PFAM: Putative transposase%2C YhgA-like gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0388 Thena_0389 Thena_0389 Thena_0389 400041 400466 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: mta:Moth_0185 DNA polymerase%2C beta-like region~PFAM: Nucleotidyltransferase~SPTR: DNA polymerase%2C beta-like region%3B~IMG reference gene:2504783767~PFAM: Nucleotidyltransferase domain gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0389 Thena_0390 Thena_0390 Thena_0390 400456 400878 + protein of unknown function DUF86 COGs: COG2445 conserved hypothetical protein~InterPro IPR008201~KEGG: dth:DICTH_1815 hypothetical protein~PFAM: Protein of unknown function DUF86~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783768~PFAM: Protein of unknown function DUF86 gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0390 Thena_0391 Thena_0391 Thena_0391 400886 400996 + hypothetical protein IMG reference gene:2504783769 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0391 Thena_0392 Thena_0392 Thena_0392 401060 401836 + ABC-2 type transporter COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component~InterPro IPR013525~KEGG: adg:Adeg_0506 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%3B~IMG reference gene:2504783770~PFAM: ABC-2 type transporter gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0392 Thena_0393 Thena_0393 Thena_0393 401837 402574 + Teichoic-acid-transporting ATPase COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: toc:Toce_0489 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Teichoic-acid-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~IMG reference gene:2504783771~PFAM: ABC transporter gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0393 Thena_0394 Thena_0394 Thena_0394 402643 403611 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: hya:HY04AAS1_1577 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase family 2%3B~manually curated~IMG reference gene:2504783772~PFAM: Glycosyl transferase family 2 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0394 Thena_0395 Thena_0395 Thena_0395 403640 404206 + dTDP-4-dehydrorhamnose 3%2C5-epimerase COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase~InterPro IPR000888~KEGG: saf:SULAZ_0363 dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase related~PRIAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~SPTR: dTDP-4-dehydrorhamnose 3%2C5-epimerase%3B~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase related~IMG reference gene:2504783773~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0395 Thena_0396 Thena_0396 Thena_0396 404275 407172 + glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR013217:IPR001173~KEGG: hya:HY04AAS1_1576 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2%3B Methyltransferase type 12~SPTR: Glycosyl transferase family 2%3B~IMG reference gene:2504783774~PFAM: Methionine biosynthesis protein MetW%3B Glycosyl transferase family 2 gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0396 Thena_0397 Thena_0397 Thena_0397 407284 409887 + glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: hba:Hbal_3155 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: ORF12 protein%3B~IMG reference gene:2504783775~PFAM: Glycosyl transferases group 1%3B Glycosyl transferase family 2 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0397 Thena_0398 Thena_0398 Thena_0398 410075 411805 + hypothetical protein KEGG: dfe:Dfer_5102 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783776 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0398 Thena_0399 Thena_0399 Thena_0399 411885 412310 + GtrA family protein InterPro IPR007267~KEGG: cyj:Cyan7822_5788 GtrA family protein~PFAM: GtrA-like protein~SPTR: GtrA family protein%3B~manually curated~IMG reference gene:2504783777~PFAM: GtrA-like protein gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0399 Thena_0400 Thena_0400 Thena_0400 412340 413521 + nucleotide sugar dehydrogenase COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase~InterPro IPR017476:IPR001732:IPR014026:IPR014027~KEGG: bhy:BHWA1_01693 UDP-glucose/GDP-mannose dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%2C N-terminal%3B UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase%2C C-terminal~PRIAM: UDP-glucose 6-dehydrogenase~SPTR: UDP-glucose/GDP-mannose dehydrogenase%3B~TIGRFAM: Nucleotide sugar dehydrogenase~IMG reference gene:2504783778~PFAM: UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain~TIGRFAM: nucleotide sugar dehydrogenase gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0400 Thena_0401 Thena_0401 Thena_0401 413612 414634 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: bhy:BHWA1_01692 UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: UDP-glucose 4-epimerase%3B~IMG reference gene:2504783779~PFAM: NAD dependent epimerase/dehydratase family gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0401 Thena_0402 Thena_0402 Thena_0402 414635 415345 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: bhy:BHWA1_01691 glycosyl transferase%2C family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~IMG reference gene:2504783780~PFAM: Glycosyl transferase family 2 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0402 Thena_0403 Thena_0403 Thena_0403 415518 416642 + hypothetical protein COGs: COG1106 ATPase~KEGG: mar:MAE_11800 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783781 gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0403 Thena_0404 Thena_0404 Thena_0404 416617 417300 + hypothetical protein KEGG: cyh:Cyan8802_0731 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783782 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0404 Thena_0405 Thena_0405 Thena_0405 417358 417564 + hypothetical protein IMG reference gene:2504783783 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0405 Thena_0406 Thena_0406 Thena_0406 417646 417798 + Uncharacterized protein family UPF0150 InterPro IPR005357~KEGG: mem:Memar_1245 hypothetical protein~PFAM: Uncharacterised protein family UPF0150~SPTR: Toxin-antitoxin system%2C antitoxin component%2C HicB family%3B~IMG reference gene:2504783784~PFAM: Uncharacterised protein family (UPF0150) gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0406 Thena_0407 Thena_0407 Thena_0407 417896 418909 - pseudogene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0407 Thena_0408 Thena_0408 Thena_0408 418957 419733 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: IstB domain protein ATP-binding protein%3B~IMG reference gene:2504783786~PFAM: IstB-like ATP binding protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0408 Thena_0409 Thena_0409 Thena_0409 419726 420799 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: dap:Dacet_0760 integrase catalytic region~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~IMG reference gene:2504783787~PFAM: Bacterial regulatory protein%2C Fis family%3B Integrase core domain gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0409 Thena_0410 Thena_0410 Thena_0410 420882 420974 - hypothetical protein IMG reference gene:2504783788 gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0410 Thena_0411 Thena_0411 Thena_0411 421352 421582 + Uncharacterized protein family UPF0150 COGs: COG1598 conserved hypothetical protein~InterPro IPR005357~KEGG: cyh:Cyan8802_2602 protein of unknown function UPF0150~PFAM: Uncharacterised protein family UPF0150~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783789~PFAM: Uncharacterised protein family (UPF0150) gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0411 Thena_0412 Thena_0412 Thena_0412 421815 422225 - hypothetical protein IMG reference gene:2504783790 gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0412 Thena_0413 Thena_0413 Thena_0413 422294 423949 - hypothetical protein KEGG: sul:SYO3AOP1_1133 efflux transporter%2C RND family%2C MFP subunit~SPTR: Secretion system protein D%3B~IMG reference gene:2504783791 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0413 Thena_0414 Thena_0414 Thena_0414 423946 424551 - hypothetical protein KEGG: pyo:PY04214 hypothetical protein~SPTR: Repeat organellar protein-related%3B~IMG reference gene:2504783792~PFAM: Outer membrane efflux protein gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0414 Thena_0415 Thena_0415 Thena_0415 424548 425630 - hypothetical protein IMG reference gene:2504783793 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0415 Thena_0416 Thena_0416 Thena_0416 425657 426361 - hypothetical protein IMG reference gene:2504783794 gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0416 Thena_0417 Thena_0417 Thena_0417 426426 427337 - Cna B domain protein InterPro IPR008454~KEGG: mst:Msp_1465 asn/thr-rich large protein family protein~PFAM: Collagen-binding surface protein Cna-like%2C B region~SPTR: Cna B domain protein%3B~IMG reference gene:2504783795~PFAM: Cna protein B-type domain gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0417 Thena_0418 Thena_0418 Thena_0418 427589 430132 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterProIPR000014:IPR000160:IPR001633:IPR013767:IPR 003018:IPR013655~KEGG: nis:NIS_0136 hypothetical protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold-3%3B GAF%3B PAS fold~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504783796~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0418 Thena_0419 Thena_0419 Thena_0419 430456 430857 - hypothetical protein IMG reference gene:2504783797 gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0419 Thena_0420 Thena_0420 Thena_0420 430936 431401 - pseudogene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0420 Thena_0421 Thena_0421 Thena_0421 431599 431742 + hypothetical protein IMG reference gene:2504783799 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0421 Thena_0422 Thena_0422 Thena_0422 431727 432380 + transaldolase COGs: COG0176 Transaldolase~HAMAP: transaldolase~InterPro IPR004731:IPR001585~KEGG: adg:Adeg_1864 transaldolase~PFAM: Transaldolase~SPTR: Probable transaldolase 2%3B~TIGRFAM: Transaldolase C~IMG reference gene:2504783800~PFAM: Transaldolase~TIGRFAM: fructose-6-phosphate aldolase%2C TalC/MipB family gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0422 Thena_0423 Thena_0423 Thena_0423 432417 433706 + ribulose bisphosphate carboxylase%2C type III COGs: COG1850 Ribulose 1 5-bisphosphate carboxylase large subunit~InterPro IPR017712:IPR017444:IPR000685~KEGG: adg:Adeg_1863 ribulose bisphosphate carboxylase%2C type III~PFAM: Ribulose bisphosphate carboxylase%2C large subunit%2C C-terminal%3B Ribulose bisphosphate carboxylase%2C large subunit%2C N-terminal~PRIAM: Ribulose-bisphosphate carboxylase~SPTR: Ribulose bisphosphate carboxylase%2C type III%3B~TIGRFAM: Ribulose bisphosphate carboxylase%2C large subunit%2C type III~IMG reference gene:2504783801~PFAM: Ribulose bisphosphate carboxylase large chain%2C N-terminal domain%3B Ribulose bisphosphate carboxylase large chain%2C catalytic domain~TIGRFAM: ribulose bisphosphate carboxylase%2C type III gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0423 Thena_0424 Thena_0424 Thena_0424 433708 434604 + Phosphoribulokinase COGs: COG0572 Uridine kinase~InterPro IPR006083~KEGG: adg:Adeg_1862 phosphoribulokinase/uridine kinase~PFAM: Phosphoribulokinase/uridine kinase~PRIAM: Phosphoribulokinase~SPTR: Phosphoribulokinase/uridine kinase%3B~IMG reference gene:2504783802~PFAM: Phosphoribulokinase / Uridine kinase family gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0424 Thena_0425 Thena_0425 Thena_0425 434594 435475 + Transketolase COGs: COG3959 Transketolase N-terminal subunit~InterPro IPR005474~KEGG: adg:Adeg_1861 transketolase domain protein~PFAM: Transketolase%2C N-terminal~PRIAM: Transketolase~SPTR: Transketolase domain protein%3B~IMG reference gene:2504783803~PFAM: Transketolase%2C thiamine diphosphate binding domain gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0425 Thena_0426 Thena_0426 Thena_0426 435507 436559 + 1-deoxy-D-xylulose-5-phosphate synthase COGs: COG3958 Transketolase C-terminal subunit~InterPro IPR005475:IPR005476~KEGG: adg:Adeg_1860 transketolase central region~PFAM: Transketolase-like%2C pyrimidine-binding domain%3B Transketolase%2C C-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase~SPTR: Transketolase central region%3B~IMG reference gene:2504783804~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0426 Thena_0427 Thena_0427 Thena_0427 436543 437544 + glyceraldehyde-3-phosphate dehydrogenase%2C type I COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase~InterPro IPR006424:IPR020828:IPR020829~KEGG: saf:SULAZ_0209 glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)~SPTR: Strongly similar to glyceraldehyde-3-phosphate dehydrogenase%3B~TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase%2C type I~IMG reference gene:2504783805~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0427 Thena_0428 Thena_0428 Thena_0428 437546 438751 + Phosphoglycerate kinase COGs: COG0126 3-phosphoglycerate kinase~HAMAP: Phosphoglycerate kinase~InterPro IPR001576~KEGG: chy:CHY_0281 phosphoglycerate kinase~PFAM: Phosphoglycerate kinase~PRIAM: Phosphoglycerate kinase~SPTR: Phosphoglycerate kinase%3B~IMG reference gene:2504783806~PFAM: Phosphoglycerate kinase gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0428 Thena_0429 Thena_0429 Thena_0429 438795 439766 + Fructose-1%2C6-bisphosphatase class 1 COGs: COG0158 Fructose-1 6-bisphosphatase~HAMAP: Fructose-1%2C6-bisphosphatase~InterPro IPR000146~KEGG: saf:SULAZ_1502 fructose-1%2C6-bisphosphatase~PFAM: Fructose-1%2C6-bisphosphatase~PRIAM: Fructose-bisphosphatase~SPTR: Fructose-1%2C6-bisphosphatase class 1%3B~IMG reference gene:2504783807~PFAM: Fructose-1-6-bisphosphatase gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0429 Thena_0430 Thena_0430 Thena_0430 439831 440274 + sugar-phosphate isomerase%2C RpiB/LacA/LacB family COGs: COG0698 Ribose 5-phosphate isomerase RpiB~InterPro IPR004785:IPR003500~KEGG: shi:Shel_21560 ribose-5-phosphate isomerase~PFAM: Ribose/galactose isomerase~PRIAM: Ribose-5-phosphate isomerase~SPTR: Ribose-5-phosphate isomerase B%3B~TIGRFAM: Ribose/galactose isomerase%3B Ribose 5-phosphate isomerase B~IMG reference gene:2504783808~PFAM: Ribose/Galactose Isomerase~TIGRFAM: ribose 5-phosphate isomerase B%3B sugar-phosphate isomerases%2C RpiB/LacA/LacB family gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0430 Thena_0431 Thena_0431 Thena_0431 440290 440916 + Ribulose-phosphate 3-epimerase COGs: COG0036 Pentose-5-phosphate-3-epimerase~InterPro IPR000056~KEGG: cju:C8J_0424 ribulose-phosphate 3-epimerase~PFAM: Ribulose-phosphate 3-epimerase~PRIAM: Ribulose-phosphate 3-epimerase~SPTR: Ribulose-phosphate 3-epimerase%3B~IMG reference gene:2504783809~PFAM: Ribulose-phosphate 3 epimerase family~TIGRFAM: ribulose-phosphate 3-epimerase gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0431 Thena_0432 Thena_0432 Thena_0432 441069 442640 - hypothetical protein COGs: COG1331 Highly conserved protein containing a thioredoxin domain~InterPro IPR004879~KEGG: hth:HTH_1371 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783810~PFAM: Protein of unknown function%2C DUF255 gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0432 Thena_0433 Thena_0433 Thena_0433 442769 443062 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: kol:Kole_1085 protein of unknown function DUF156~PFAM: Protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783811~PFAM: Uncharacterised BCR%2C COG1937 gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0433 Thena_0434 Thena_0434 Thena_0434 443043 443249 - Heavy metal transport/detoxification protein InterPro IPR006121~KEGG: kol:Kole_1084 heavy metal transport/detoxification protein~PFAM: Heavy metal transport/detoxification protein~SPTR: Heavy metal transport/detoxification protein%3B~IMG reference gene:2504783812~PFAM: Heavy-metal-associated domain gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0434 Thena_0435 Thena_0435 Thena_0435 443260 443505 - glutaredoxin COGs: COG0695 Glutaredoxin and related protein~InterPro IPR002109~KEGG: afr:AFE_2449 hypothetical protein~PFAM: Glutaredoxin~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783813~PFAM: Glutaredoxin gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0435 Thena_0436 Thena_0436 Thena_0436 443536 443736 - pseudogene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0436 Thena_0437 Thena_0437 Thena_0437 443765 445975 - heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterProIPR006403:IPR006416:IPR001757:IPR006121:IPR 008250:IPR005834~KEGG: hor:Hore_04850 heavy metal translocating P-type ATPase~PFAM: ATPase%2C P-type%2C ATPase-associated region%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase-like hydrolase~PRIAM: Copper-exporting ATPase~SPTR: Heavy metal translocating P-type ATPase%3B~TIGRFAM: ATPase%2C P-type%2C heavy metal translocating%3B ATPase%2C P type%2C cation/copper-transporter%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~IMG reference gene:2504783815~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0437 Thena_0438 Thena_0438 Thena_0438 446186 446860 + protein of unknown function DUF45 COGs: COG1451 metal-dependent hydrolase~InterPro IPR002725~KEGG: tmt:Tmath_1393 protein of unknown function DUF45~PFAM: Protein of unknown function DUF45~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783816~PFAM: Protein of unknown function DUF45 gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0438 Thena_0439 Thena_0439 Thena_0439 446927 447148 + Uncharacterized conserved protein UCP037246 COGs: COG4443 conserved hypothetical protein~InterPro IPR017154~KEGG: cby:CLM_2293 hypothetical protein~PFAM: Uncharacterised conserved protein UCP037246~SPTR: Conserved domain protein%3B~IMG reference gene:2504783817~PFAM: Uncharacterized protein conserved in bacteria (DUF2128) gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0439 Thena_0440 Thena_0440 Thena_0440 447251 448648 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: emi:Emin_0882 major facilitator transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504783818~PFAM: Major Facilitator Superfamily gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0440 Thena_0441 Thena_0441 Thena_0441 448626 449366 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: kfl:Kfla_3481 alpha/beta hydrolase fold protein~PFAM: Alpha/beta hydrolase fold-1~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783819~PFAM: alpha/beta hydrolase fold gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0441 Thena_0442 Thena_0442 Thena_0442 449363 451666 + DNA polymerase B region COGs: COG0417 DNA polymerase elongation subunit (family B)~InterPro IPR006172:IPR006133:IPR006134~KEGG: iag:Igag_0535 replicative DNA polymerase I~PFAM: DNA-directed DNA polymerase%2C family B%2C conserved region%3B DNA-directed DNA polymerase%2C family B%2C exonuclease domain~SMART: DNA-directed DNA polymerase%2C family B~SPTR: Replicative DNA polymerase I%3B~IMG reference gene:2504783820~PFAM: DNA polymerase family B%3B DNA polymerase family B%2C exonuclease domain gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0442 Thena_0443 Thena_0443 Thena_0443 451726 452073 + Aspartate 1-decarboxylase COGs: COG0853 Aspartate 1-decarboxylase~HAMAP: Aspartate decarboxylase~InterPro IPR003190~KEGG: ddf:DEFDS_0845 aspartate 1-decarboxylase~PFAM: Aspartate decarboxylase~PRIAM: Aspartate 1-decarboxylase~SPTR: Aspartate 1-decarboxylase%3B~TIGRFAM: Aspartate decarboxylase~IMG reference gene:2504783821~PFAM: Aspartate decarboxylase~TIGRFAM: L-aspartate-alpha-decarboxylase gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0443 Thena_0444 Thena_0444 Thena_0444 452070 452780 + hypothetical protein IMG reference gene:2504783822 gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0444 Thena_0445 Thena_0445 Thena_0445 452787 453326 + 4-vinyl reductase 4VR InterPro IPR004096~KEGG: dds:Ddes_0419 4-vinyl reductase 4VR~PFAM: 4-vinyl reductase%2C 4VR~SPTR: 4-vinyl reductase 4VR%3B~IMG reference gene:2504783823 gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0445 Thena_0446 Thena_0446 Thena_0446 453326 454234 + ribonuclease HII/HIII COGs: COG1039 Ribonuclease HIII~InterPro IPR001352~KEGG: mpl:Mpal_0022 ribonuclease HIII~PFAM: Ribonuclease HII/HIII~SPTR: Ribonuclease HIII%3B~IMG reference gene:2504783824~PFAM: Ribonuclease HII~TIGRFAM: ribonuclease HIII gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0446 Thena_0447 Thena_0447 Thena_0447 454231 455016 + hypothetical protein COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I~KEGG: afn:Acfer_1793 hypothetical protein~SPTR: Metal-dependent hydrolases of the beta-lactamase superfamily I%3B~IMG reference gene:2504783825~PFAM: Metallo-beta-lactamase superfamily gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0447 Thena_0448 Thena_0448 Thena_0448 455013 455324 - pseudogene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0448 Thena_0449 Thena_0449 Thena_0449 455522 456019 + hemerythrin-like metal-binding protein COGs: COG2703 Hemerythrin~InterPro IPR012827:IPR012312~KEGG: ate:Athe_0453 hemerythrin-like metal-binding protein~PFAM: Haemerythrin/HHE cation-binding motif~SPTR: Hemerythrin-like metal-binding protein%3B~TIGRFAM: Haemerythrin-like%2C metal-binding~IMG reference gene:2504783827~PFAM: Hemerythrin HHE cation binding domain~TIGRFAM: hemerythrin-like metal-binding domain gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0449 Thena_0450 Thena_0450 Thena_0450 456035 457315 + diguanylate cyclase COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain~InterPro IPR000160~KEGG: diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Response regulator receiver modulated diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~IMG reference gene:2504783828~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0450 Thena_0451 Thena_0451 Thena_0451 457364 457936 - Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR003251~KEGG: mev:Metev_2148 rubrerythrin~PFAM: Rubrerythrin~SPTR: Rubrerythrin%3B~IMG reference gene:2504783829~PFAM: Rubrerythrin gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0451 Thena_0452 Thena_0452 Thena_0452 457949 458110 - Rubredoxin-type Fe(Cys)4 protein COGs: COG1773 Rubredoxin~InterPro IPR004039~KEGG: dba:Dbac_2515 rubredoxin-type Fe(Cys)4 protein~PFAM: Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubredoxin-type Fe(Cys)4 protein%3B~IMG reference gene:2504783830~PFAM: Rubredoxin gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0452 Thena_0453 Thena_0453 Thena_0453 458251 459783 - hypothetical protein KEGG: hypothetical protein~SPTR: NHL repeat containing protein%3B~IMG reference gene:2504783831 gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0453 Thena_0454 Thena_0454 Thena_0454 459791 460219 - hypothetical protein IMG reference gene:2504783832 gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0454 Thena_0455 Thena_0455 Thena_0455 460626 461726 + geranylgeranyl reductase COGs: COG0644 Dehydrogenase (flavoprotein)~InterPro IPR011777:IPR006076~KEGG: dsa:Desal_3780 geranylgeranyl reductase~PFAM: FAD dependent oxidoreductase~SPTR: Geranylgeranyl reductase%3B~TIGRFAM: Geranylgeranyl reductase%2C plant/prokaryotic~IMG reference gene:2504783833~PFAM: FAD binding domain~TIGRFAM: geranylgeranyl reductase family gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0455 Thena_0456 Thena_0456 Thena_0456 461707 462501 - protein of unknown function DUF347 COGs: COG4705 Uncharacterized membrane-anchored protein~InterPro IPR007136~KEGG: afr:AFE_2330 hypothetical protein~PFAM: Protein of unknown function DUF347~SPTR: Membrane protein%2C putative%3B~IMG reference gene:2504783834~PFAM: Repeat of Unknown Function (DUF347) gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0456 Thena_0457 Thena_0457 Thena_0457 462700 463869 + Alcohol dehydrogenase (NADP(+)) COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family~InterPro IPR001670~KEGG: cbf:CLI_1505 NADH-dependent butanol dehydrogenase~PFAM: Alcohol dehydrogenase%2C iron-type~PRIAM: Alcohol dehydrogenase (NADP(+))~SPTR: NADH-dependent butanol dehydrogenase%3B~IMG reference gene:2504783835~PFAM: Iron-containing alcohol dehydrogenase gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0457 Thena_0458 Thena_0458 Thena_0458 463925 464287 - DsrE family protein COGs: COG2044 peroxiredoxins~InterPro IPR009710:IPR003787~KEGG: cch:Cag_1216 hypothetical protein~PFAM: Sulphur relay%2C DsrE-like protein%3B Protein of unknown function DUF1291~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783836~PFAM: DsrE/DsrF-like family gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0458 Thena_0459 Thena_0459 Thena_0459 464333 464695 - DsrE family protein COGs: COG2044 peroxiredoxins~InterPro IPR003787~KEGG: cch:Cag_1216 hypothetical protein~PFAM: Sulphur relay%2C DsrE-like protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783837~PFAM: DsrE/DsrF-like family gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0459 Thena_0460 Thena_0460 Thena_0460 464730 465092 - DsrE family protein COGs: COG2044 peroxiredoxins~InterPro IPR003787~KEGG: cch:Cag_1216 hypothetical protein~PFAM: Sulphur relay%2C DsrE-like protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783838~PFAM: DsrE/DsrF-like family gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0460 Thena_0461 Thena_0461 Thena_0461 465117 466079 - protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterPro IPR004017~KEGG: hbu:Hbut_0948 Fe-S oxidoreductase~PFAM: Cysteine-rich region%2C CCG~SPTR: Predicted Fe-S oxidoreductase%3B~IMG reference gene:2504783839~PFAM: Cysteine-rich domain gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0461 Thena_0462 Thena_0462 Thena_0462 466084 466386 - CoB/CoM heterodisulfide reductase%2C subunit C COGs: COG1150 Heterodisulfide reductase subunit C~KEGG: mvu:Metvu_0281 CoB/CoM heterodisulfide reductase%2C subunit C~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein%3B~IMG reference gene:2504783840 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0462 Thena_0463 Thena_0463 Thena_0463 466388 466630 - hypothetical protein IMG reference gene:2504783841~PFAM: Sugar-specific transcriptional regulator TrmB gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0463 Thena_0464 Thena_0464 Thena_0464 466630 468351 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR003953:IPR001450~KEGG: adg:Adeg_1885 4Fe-4S ferredoxin iron-sulfur binding domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup%3B Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal~SPTR: Fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B~IMG reference gene:2504783842~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B 4Fe-4S binding domain gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0464 Thena_0465 Thena_0465 Thena_0465 468348 470933 - Glutamate synthase (NADPH) COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR003953:IPR001450:IPR013027~KEGG: abi:Aboo_0977 FAD-dependent pyridine nucleotide-disulfide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~PRIAM: Glutamate synthase (NADPH)~SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase%3B~IMG reference gene:2504783843~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B FAD binding domain gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0465 Thena_0466 Thena_0466 Thena_0466 470951 471346 - methyl-viologen-reducing hydrogenase delta subunit COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit~InterPro IPR003813~KEGG: sfu:Sfum_2148 methyl-viologen-reducing hydrogenase%2C delta subunit~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit~SPTR: Methyl-viologen-reducing hydrogenase%2C delta subunit%3B~IMG reference gene:2504783844~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0466 Thena_0467 Thena_0467 Thena_0467 471348 471599 - SirA-like domain-containing protein InterPro IPR001455~KEGG: cag:Cagg_3436 SirA family protein~PFAM: SirA-like~SPTR: SirA family protein%3B~IMG reference gene:2504783845~PFAM: SirA-like protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0467 Thena_0468 Thena_0468 Thena_0468 471619 471972 - regulatory protein ArsR InterPro IPR001845~KEGG: regulatory protein ArsR~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Regulatory protein ArsR%3B~IMG reference gene:2504783846~PFAM: Bacterial regulatory protein%2C arsR family gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0468 Thena_0469 Thena_0469 Thena_0469 472514 473521 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR002482:IPR018392:IPR016047~KEGG: hor:Hore_10980 peptidase M23B~PFAM: Peptidase M23%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding Lysin subgroup~SPTR: Peptidase M23B%3B~IMG reference gene:2504783848~PFAM: Peptidase family M23%3B LysM domain gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0469 Thena_0470 Thena_0470 Thena_0470 473598 474512 + Thioredoxin-disulfide reductase COGs: COG0492 Thioredoxin reductase~InterPro IPR013027~KEGG: dma:DMR_17800 putative thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Thioredoxin-disulfide reductase~SPTR: Putative thioredoxin reductase%3B~IMG reference gene:2504783849~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0470 Thena_0471 Thena_0471 Thena_0471 474509 475855 + SH3 type 3 domain protein InterPro IPR003646:IPR013247:IPR011110~KEGG: dae:Dtox_3626 N-acetylmuramoyl-L-alanine amidase~PFAM: SH3%2C type 3%3B Two component regulator propeller~SMART: Bacterial SH3-like region~SPTR: Sensor histidine kinase/response regulator%3B~IMG reference gene:2504783850~PFAM: Bacterial SH3 domain gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0471 Thena_0472 Thena_0472 Thena_0472 475914 476762 + protein of unknown function DUF100 COGs: COG1980 fructose 1 6-bisphosphatase~InterPro IPR002803~KEGG: tte:TTE0285 hypothetical protein~PFAM: Fructose-1%2C6-bisphosphatase%2C class V~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783851~PFAM: Fructose-1%2C6-bisphosphatase gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0472 Thena_0473 Thena_0473 Thena_0473 476778 477032 + regulatory protein%2C FmdB family InterPro IPR013429~KEGG: regulatory protein%2C FmdB family~PFAM: Regulatory protein%2C FmdB%2C putative~SPTR: Regulatory protein%2C FmdB family%3B~TIGRFAM: Regulatory protein%2C FmdB%2C putative~IMG reference gene:2504783852~PFAM: Zinc ribbon domain~TIGRFAM: putative regulatory protein%2C FmdB family gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0473 Thena_0474 Thena_0474 Thena_0474 477020 477607 + hypothetical protein KEGG: rsd:TGRD_490 OstA-like outer membrane protein~SPTR: OstA-like outer membrane protein%3B~IMG reference gene:2504783853 gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0474 Thena_0475 Thena_0475 Thena_0475 477600 478079 - hypothetical protein InterPro IPR012902~IMG reference gene:2504783854 gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0475 Thena_0476 Thena_0476 Thena_0476 478048 479583 - Phosphoenolpyruvate carboxykinase (ATP) COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP)~HAMAP: Phosphoenolpyruvate carboxykinase [ATP]~InterPro IPR001272~KEGG: tte:TTE1783 phosphoenolpyruvate carboxykinase~PFAM: Phosphoenolpyruvate carboxykinase%2C ATP-utilising~SPTR: Phosphoenolpyruvate carboxykinase [ATP]%3B~TIGRFAM: Phosphoenolpyruvate carboxykinase%2C ATP-utilising~IMG reference gene:2504783855~PFAM: Phosphoenolpyruvate carboxykinase~TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0476 Thena_0477 Thena_0477 Thena_0477 479654 481033 + exodeoxyribonuclease VII%2C large subunit COGs: COG1570 Exonuclease VII large subunit~InterPro IPR003753:IPR020579~KEGG: pdi:BDI_2702 exodeoxyribonuclease VII large subunit~PFAM: Exonuclease VII%2C large subunit%2C C-terminal~SPTR: Exodeoxyribonuclease 7 large subunit%3B~TIGRFAM: Exonuclease VII%2C large subunit~IMG reference gene:2504783856~PFAM: Exonuclease VII%2C large subunit~TIGRFAM: exodeoxyribonuclease VII%2C large subunit gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0477 Thena_0478 Thena_0478 Thena_0478 481026 481223 + Exonuclease VII small subunit InterPro IPR003761~KEGG: pru:PRU_0167 exodeoxyribonuclease VII small subunit~PFAM: Exonuclease VII%2C small subunit~SPTR: Exodeoxyribonuclease 7 small subunit%3B~IMG reference gene:2504783857~PFAM: Exonuclease VII small subunit gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0478 Thena_0479 Thena_0479 Thena_0479 481404 482306 + Inorganic diphosphatase COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase~InterPro IPR001667:IPR004097~KEGG: adg:Adeg_1612 DHHA2 domain protein~PFAM: DHHA2%3B Phosphoesterase%2C RecJ-like~PRIAM: Inorganic diphosphatase~SPTR: DHHA2 domain protein%3B~IMG reference gene:2504783858~PFAM: DHH family%3B DHHA2 domain gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0479 Thena_0480 Thena_0480 Thena_0480 482416 483645 + PpiC-type peptidyl-prolyl cis-trans isomerase COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase~InterPro IPR015391:IPR000297~KEGG: hmo:HM1_0720 ppic-type ppiase domain protein%2C putative~PFAM: Peptidyl-prolyl cis-trans isomerase%2C PpiC-type%3B SurA N-terminal~SPTR: Ppic-type ppiase domain protein%2C putative%3B~IMG reference gene:2504783859~PFAM: SurA N-terminal domain%3B PPIC-type PPIASE domain gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0480 Thena_0481 Thena_0481 Thena_0481 483668 484471 + MazG family protein COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain~InterPro IPR011551:IPR004518~KEGG: MazG family protein~PFAM: NTP pyrophosphohydrolase MazG%2C putative catalytic core~SPTR: MazG family protein%3B~TIGRFAM: NTP pyrophosphohydrolase MazG%2C bacterial~IMG reference gene:2504783860~PFAM: MazG nucleotide pyrophosphohydrolase domain~TIGRFAM: MazG family protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0481 Thena_0482 Thena_0482 Thena_0482 484458 484682 + RNA-binding S4 domain protein COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)~InterPro IPR002942~KEGG: ppy:PPE_00047 hypothetical protein~PFAM: RNA-binding S4~SMART: RNA-binding S4~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783861~PFAM: S4 domain gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0482 Thena_0483 Thena_0483 Thena_0483 484639 484980 + hypothetical protein IMG reference gene:2504783862~PFAM: Septum formation initiator gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0483 Thena_0484 Thena_0484 Thena_0484 484987 485328 + RNA binding S1 domain protein COGs: COG1098 RNA binding protein (contains ribosomal protein S1 domain)~InterPro IPR003029~KEGG: RNA binding S1 domain protein~PFAM: Ribosomal protein S1%2C RNA binding domain~SPTR: RNA binding S1 domain protein%3B~IMG reference gene:2504783863~PFAM: S1 RNA binding domain gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0484 Thena_0485 Thena_0485 Thena_0485 485338 486540 + Argininosuccinate synthase COGs: COG0137 Argininosuccinate synthase~HAMAP: Argininosuccinate synthase~InterPro IPR001518~KEGG: toc:Toce_0156 argininosuccinate synthase~PFAM: Argininosuccinate synthase~PRIAM: Argininosuccinate synthase~SPTR: Argininosuccinate synthase%3B~TIGRFAM: Argininosuccinate synthase~IMG reference gene:2504783864~PFAM: Arginosuccinate synthase~TIGRFAM: argininosuccinate synthase gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0485 Thena_0486 Thena_0486 Thena_0486 486524 487984 + Argininosuccinate lyase COGs: COG0165 Argininosuccinate lyase~HAMAP: Argininosuccinate lyase~InterPro IPR009049:IPR000362~KEGG: dap:Dacet_2886 argininosuccinate lyase~PFAM: Fumarate lyase~PRIAM: Argininosuccinate lyase~SPTR: Argininosuccinate lyase%3B~TIGRFAM: Argininosuccinate lyase~IMG reference gene:2504783865~PFAM: Lyase~TIGRFAM: argininosuccinate lyase gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0486 Thena_0487 Thena_0487 Thena_0487 487962 489089 + protein of unknown function DUF1385 InterPro IPR010787~KEGG: protein of unknown function DUF1385~PFAM: Protein of unknown function DUF1385~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783866~PFAM: Protein of unknown function (DUF1385) gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0487 Thena_0488 Thena_0488 Thena_0488 489035 489991 + ABC-type transporter%2C integral membrane subunit COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: cbi:CLJ_B1267 putative oligopeptide ABC transporter%2C permease protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative oligopeptide ABC transporter%2C permease protein%3B~IMG reference gene:2504783867~PFAM: Binding-protein-dependent transport system inner membrane component gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0488 Thena_0489 Thena_0489 Thena_0489 490370 491287 + hypothetical protein KEGG: mdo:100021983 hypothetical protein LOC100021983~SPTR: GI15579%3B~IMG reference gene:2504783868~PFAM: Localisation of periplasmic protein complexes gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0489 Thena_0490 Thena_0490 Thena_0490 491423 492346 + oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683~KEGG: dth:DICTH_0431 oxidoreductase%2C Gfo/Idh/MocA family/transferase hexapeptide repeat protein~PFAM: Oxidoreductase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783869~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0490 Thena_0491 Thena_0491 Thena_0491 492348 493502 + (R)-citramalate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR000891~KEGG: chy:CHY_1104 trans-homoaconitate synthase~PFAM: Pyruvate carboxyltransferase~PRIAM: (R)-citramalate synthase~SPTR: Homocitrate synthase%3B~IMG reference gene:2504783870~PFAM: HMGL-like gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0491 Thena_0492 Thena_0492 Thena_0492 493698 494273 + pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR011894:IPR019752~KEGG: dtu:Dtur_0260 pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit~PFAM: Pyruvate/ketoisovalerate oxidoreductase~PRIAM: Pyruvate synthase~SPTR: Pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit%3B~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate~IMG reference gene:2504783871~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0492 Thena_0493 Thena_0493 Thena_0493 494270 494629 + pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit~InterPro IPR011898:IPR001450~KEGG: pmo:Pmob_0586 pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit%3B~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C delta subunit%2C pyruvate/2-ketoisovalerate~IMG reference gene:2504783872~PFAM: 4Fe-4S binding domain~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C delta subunit%2C pyruvate/2-ketoisovalerate family gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0493 Thena_0494 Thena_0494 Thena_0494 494641 495828 + Pyruvate synthase COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880~KEGG: csc:Csac_1460 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein~PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal~PRIAM: Pyruvate synthase~SPTR: Pyruvate ferredoxin oxidoreductase%2C alpha subunit%3B~IMG reference gene:2504783873~PFAM: domain%3B Transketolase%2C C-terminal domain gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0494 Thena_0495 Thena_0495 Thena_0495 495844 496827 + Pyruvate synthase COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766~KEGG: tye:THEYE_A0910 pyruvate synthase subunit PorB~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: Pyruvate synthase~SPTR: Pyruvate synthase subunit PorB%3B~IMG reference gene:2504783874~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0495 Thena_0496 Thena_0496 Thena_0496 497172 498179 + Thiamine-phosphate pyrophosphorylase COGs: COG0352 Thiamine monophosphate synthase~HAMAP: Thiamine-phosphate pyrophosphorylase~InterPro IPR003733~KEGG: adg:Adeg_0144 thiamine-phosphate pyrophosphorylase~PFAM: Thiamine monophosphate synthase~SPTR: Thiamine-phosphate pyrophosphorylase%3B~IMG reference gene:2504783875~PFAM: Thiamine monophosphate synthase/TENI~TIGRFAM: thiamine-phosphate pyrophosphorylase gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0496 Thena_0497 Thena_0497 Thena_0497 498180 499478 + Phosphomethylpyrimidine synthase COGs: COG0422 Thiamine biosynthesis protein ThiC~HAMAP: Thiamine biosynthesis protein ThiC~InterPro IPR002817~KEGG: tit:Thit_1845 thiamine biosynthesis protein ThiC~PFAM: Thiamine biosynthesis protein ThiC~SPTR: Phosphomethylpyrimidine synthase%3B~TIGRFAM: Thiamine biosynthesis protein ThiC~IMG reference gene:2504783876~PFAM: ThiC family~TIGRFAM: thiamine biosynthesis protein ThiC gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0497 Thena_0498 Thena_0498 Thena_0498 499472 500455 + thiamine-monophosphate kinase COGs: COG0611 Thiamine monophosphate kinase~InterPro IPR006283:IPR000728:IPR010918~KEGG: drm:Dred_2889 thiamine-monophosphate kinase~PFAM: AIR synthase related protein%3B AIR synthase related protein%2C C-terminal~PRIAM: Thiamine-phosphate kinase~SPTR: Thiamine-phosphate kinase%3B~TIGRFAM: Thiamine-monophosphate kinase~IMG reference gene:2504783877~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: thiamine-monophosphate kinase gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0498 Thena_0499 Thena_0499 Thena_0499 500609 500983 + ribosomal protein S12 COGs: COG0048 Ribosomal protein S12~InterPro IPR005679:IPR006032~KEGG: cyh:Cyan8802_1564 30S ribosomal protein S12~PFAM: Ribosomal protein S12/S23~SPTR: 30S ribosomal protein S12%2C chloroplastic%3B~TIGRFAM: Ribosomal protein S12%2C bacterial-type~IMG reference gene:2504783878~PFAM: Ribosomal protein S12~TIGRFAM: ribosomal protein S12%2C bacterial/organelle gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0499 Thena_0500 Thena_0500 Thena_0500 501006 501476 + ribosomal protein S7 COGs: COG0049 Ribosomal protein S7~InterPro IPR005717:IPR000235~KEGG: dtu:Dtur_0977 30S ribosomal protein S7~PFAM: Ribosomal protein S7~SPTR: 30S ribosomal protein S7%3B~TIGRFAM: Ribosomal protein S7%2C bacterial-type~IMG reference gene:2504783879~PFAM: Ribosomal protein S7p/S5e~TIGRFAM: ribosomal protein S7%2C bacterial/organelle gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0500 Thena_0501 Thena_0501 Thena_0501 501506 503584 + translation elongation factor G COGs: COG0480 Translation elongation factors (GTPase)~InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640~KEGG: tjr:TherJR_0293 translation elongation factor G~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFG/EF2%2C domain IV%3B Translation elongation factor EFG/EF2%2C C-terminal~SPTR: Elongation factor G 2%3B~TIGRFAM: Translation elongation factor EFG/EF2%3B Small GTP-binding protein~IMG reference gene:2504783880~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0501 Thena_0502 Thena_0502 Thena_0502 503663 504880 + translation elongation factor Tu COGs: COG0050 GTPase - translation elongation factors~InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160~KEGG: dth:DICTH_0835 elongation factor Tu~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFTu/EF1A%2C C-terminal~SPTR: Elongation factor Tu 1%3B~TIGRFAM: Translation elongation factor EFTu/EF1A%2C bacterial/organelle%3B Small GTP-binding protein~IMG reference gene:2504783881~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu C-terminal domain%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0502 Thena_0503 Thena_0503 Thena_0503 504887 505198 + 30S ribosomal protein S10 COGs: COG0051 Ribosomal protein S10~HAMAP: 30S ribosomal protein S10~InterPro IPR005731:IPR001848~KEGG: ace:Acel_0305 30S ribosomal protein S10~PFAM: Ribosomal protein S10~SPTR: 30S ribosomal protein S10%3B~TIGRFAM: Ribosomal protein S10%2C bacterial~IMG reference gene:2504783882~PFAM: Ribosomal protein S10p/S20e~TIGRFAM: ribosomal protein S10%2C bacterial/organelle gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0503 Thena_0504 Thena_0504 Thena_0504 505218 505844 + 50S ribosomal protein L3 COGs: COG0087 Ribosomal protein L3~InterPro IPR019927:IPR000597~KEGG: tte:TTE2293 50S ribosomal protein L3~PFAM: Ribosomal protein L3~SPTR: 50S ribosomal protein L3%3B~TIGRFAM: Ribosomal protein L3%2C bacterial/organelle-type~IMG reference gene:2504783883~PFAM: Ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3%2C bacterial gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0504 Thena_0505 Thena_0505 Thena_0505 505841 506452 + ribosomal protein L4/L1e COGs: COG0088 Ribosomal protein L4~InterPro IPR002136~KEGG: tro:trd_0983 ribosomal protein L4/L1 family~PFAM: Ribosomal protein L4/L1e~SPTR: 50S ribosomal protein L4%3B~IMG reference gene:2504783884~PFAM: Ribosomal protein L4/L1 family~TIGRFAM: 50S ribosomal protein L4%2C bacterial/organelle gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0505 Thena_0506 Thena_0506 Thena_0506 506459 506752 + Ribosomal protein L25/L23 COGs: COG0089 Ribosomal protein L23~InterPro IPR013025~KEGG: hmo:HM1_1380 50S ribosomal protein L23~PFAM: Ribosomal protein L25/L23~SPTR: 50S ribosomal protein L23%3B~IMG reference gene:2504783885~PFAM: Ribosomal protein L23 gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0506 Thena_0507 Thena_0507 Thena_0507 506767 507597 + ribosomal protein L2 COGs: COG0090 Ribosomal protein L2~InterPro IPR005880:IPR002171~KEGG: dth:DICTH_0840 50S ribosomal protein L2~PFAM: Ribosomal protein L2~SPTR: 50S ribosomal protein L2%3B~TIGRFAM: Ribosomal protein L2%2C bacterial-type~IMG reference gene:2504783886~PFAM: Ribosomal Proteins L2%2C RNA binding domain%3B Ribosomal Proteins L2%2C C-terminal domain~TIGRFAM: ribosomal protein L2%2C bacterial/organellar gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0507 Thena_0508 Thena_0508 Thena_0508 507623 507901 + ribosomal protein S19 COGs: COG0185 Ribosomal protein S19~InterPro IPR005732:IPR002222~KEGG: pmo:Pmob_0786 30S ribosomal protein S19~PFAM: Ribosomal protein S19/S15~SPTR: 30S ribosomal protein S19%3B~TIGRFAM: Ribosomal protein S19%2C bacterial-type~IMG reference gene:2504783887~PFAM: Ribosomal protein S19~TIGRFAM: ribosomal protein S19%2C bacterial/organelle gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0508 Thena_0509 Thena_0509 Thena_0509 507924 508283 + ribosomal protein L22 COGs: COG0091 Ribosomal protein L22~InterPro IPR005727:IPR001063~KEGG: LSU ribosomal protein L22P~PFAM: Ribosomal protein L22/L17~SPTR: 50S ribosomal protein L22%3B~TIGRFAM: Ribosomal protein L22%2C bacterial-type~IMG reference gene:2504783888~PFAM: Ribosomal protein L22p/L17e~TIGRFAM: ribosomal protein L22%2C bacterial type gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0509 Thena_0510 Thena_0510 Thena_0510 508284 509021 + ribosomal protein S3 COGs: COG0092 Ribosomal protein S3~InterProIPR005704:IPR004087:IPR008282:IPR004044:IPR 001351~KEGG: dth:DICTH_0843 ribosomal protein S3~PFAM: Ribosomal protein S3%2C C-terminal%3B Ribosomal protein S3%2C N-terminal%3B K Homology%2C type 2~SMART: K Homology~SPTR: 30S ribosomal protein S3%3B~TIGRFAM: Ribosomal protein S3%2C bacterial~IMG reference gene:2504783889~PFAM: KH domain%3B Ribosomal protein S3%2C C-terminal domain%3B Ribosomal protein S3%2C N-terminal domain~TIGRFAM: ribosomal protein S3%2C bacterial type gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0510 Thena_0511 Thena_0511 Thena_0511 509008 509436 + 50S ribosomal protein L16 COGs: COG0197 Ribosomal protein L16/L10E~HAMAP: Ribosomal protein L16~InterPro IPR000114:IPR016180~KEGG: cob:COB47_0846 ribosomal protein L16~PFAM: Ribosomal protein L10e/L16~SPTR: 50S ribosomal protein L16%3B~TIGRFAM: Ribosomal protein L16~IMG reference gene:2504783890~PFAM: Ribosomal protein L16p/L10e~TIGRFAM: ribosomal protein L16%2C bacterial/organelle gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0511 Thena_0512 Thena_0512 Thena_0512 509433 509648 + ribosomal protein L29 InterPro IPR001854~KEGG: rxy:Rxyl_2147 50S ribosomal protein L29P~PFAM: Ribosomal protein L29~SPTR: 50S ribosomal protein L29%3B~TIGRFAM: Ribosomal protein L29~IMG reference gene:2504783891~PFAM: Ribosomal L29 protein~TIGRFAM: ribosomal protein L29 gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0512 Thena_0513 Thena_0513 Thena_0513 509648 509923 + 30S ribosomal protein S17 COGs: COG0186 Ribosomal protein S17~InterPro IPR019984:IPR000266~KEGG: ckn:Calkro_0977 30S ribosomal protein S17~PFAM: Ribosomal protein S17~SPTR: 30S ribosomal protein S17%3B~TIGRFAM: Ribosomal protein S17%2C bacterial-type~IMG reference gene:2504783892~PFAM: Ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0513 Thena_0514 Thena_0514 Thena_0514 509898 510266 + ribosomal protein L14 COGs: COG0093 Ribosomal protein L14~InterPro IPR005745:IPR000218~KEGG: hor:Hore_01270 ribosomal protein L14~PFAM: Ribosomal protein L14b/L23e~SPTR: 50S ribosomal protein L14%3B~TIGRFAM: Ribosomal protein L14%2C bacterial-type~IMG reference gene:2504783893~PFAM: Ribosomal protein L14p/L23e~TIGRFAM: ribosomal protein L14%2C bacterial/organelle gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0514 Thena_0515 Thena_0515 Thena_0515 510263 510601 + ribosomal protein L24 COGs: COG0198 Ribosomal protein L24~InterPro IPR003256:IPR005824~KEGG: dth:DICTH_0848 50S ribosomal protein L24~PFAM: KOW~SMART: KOW~SPTR: 50S ribosomal protein L24%3B~TIGRFAM: Ribosomal protein L24~IMG reference gene:2504783894~PFAM: KOW motif~TIGRFAM: ribosomal protein L24%2C bacterial/organelle gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0515 Thena_0516 Thena_0516 Thena_0516 510611 511156 + ribosomal protein L5 COGs: COG0094 Ribosomal protein L5~InterPro IPR002132~KEGG: tjr:TherJR_0308 ribosomal protein L5~PFAM: Ribosomal protein L5~SPTR: 50S ribosomal protein L5%3B~IMG reference gene:2504783895~PFAM: ribosomal L5P family C-terminus%3B Ribosomal protein L5 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0516 Thena_0517 Thena_0517 Thena_0517 511209 511394 + ribosomal protein S14 COGs: COG0199 Ribosomal protein S14~InterPro IPR001209~KEGG: afn:Acfer_1916 ribosomal protein S14~PFAM: Ribosomal protein S14~SPTR: 30S ribosomal protein S14 type Z%3B~manually curated~IMG reference gene:2504783896~PFAM: Ribosomal protein S14p/S29e gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0517 Thena_0518 Thena_0518 Thena_0518 511406 511798 + ribosomal protein S8 COGs: COG0096 Ribosomal protein S8~InterPro IPR000630~KEGG: hor:Hore_01310 ribosomal protein S8~PFAM: Ribosomal protein S8~SPTR: 30S ribosomal protein S8%3B~IMG reference gene:2504783897~PFAM: Ribosomal protein S8 gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0518 Thena_0519 Thena_0519 Thena_0519 511864 512406 + ribosomal protein L6 COGs: COG0097 Ribosomal protein L6P/L9E~InterPro IPR019906:IPR020040~KEGG: csc:Csac_2272 50S ribosomal protein L6~PFAM: Ribosomal protein L6%2C alpha-beta domain~SPTR: 50S ribosomal protein L6%3B~TIGRFAM: Ribosomal protein L6%2C bacterial-type~IMG reference gene:2504783898~PFAM: Ribosomal protein L6~TIGRFAM: ribosomal protein L6%2C bacterial type gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0519 Thena_0520 Thena_0520 Thena_0520 512419 512784 + ribosomal protein L18 COGs: COG0256 Ribosomal protein L18~InterPro IPR004389:IPR005484~KEGG: tmt:Tmath_1917 ribosomal protein L18~PFAM: Ribosomal protein L18/L5~SPTR: 50S ribosomal protein L18%3B~TIGRFAM: Ribosomal protein L18%2C bacterial~IMG reference gene:2504783899~PFAM: Ribosomal L18p/L5e family~TIGRFAM: ribosomal protein L18%2C bacterial type gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0520 Thena_0521 Thena_0521 Thena_0521 512798 513301 + ribosomal protein S5 COGs: COG0098 Ribosomal protein S5~InterPro IPR005712:IPR013810:IPR005324~KEGG: cpo:COPRO5265_0995 ribosomal protein S5~PFAM: Ribosomal protein S5%2C N-terminal%3B Ribosomal protein S5%2C C-terminal~SPTR: 30S ribosomal protein S5%3B~TIGRFAM: Ribosomal protein S5%2C bacterial-type~IMG reference gene:2504783900~PFAM: Ribosomal protein S5%2C C-terminal domain%3B Ribosomal protein S5%2C N-terminal domain~TIGRFAM: ribosomal protein S5%2C bacterial/organelle type gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0521 Thena_0522 Thena_0522 Thena_0522 513294 513743 + ribosomal protein L15 COGs: COG0200 Ribosomal protein L15~InterPro IPR005749:IPR001196~KEGG: ribosomal protein L15~PFAM: Ribosomal protein L15~SPTR: LSU ribosomal protein L15P%3B~TIGRFAM: Ribosomal protein L15%2C bacterial-type~IMG reference gene:2504783901~PFAM: Ribosomal protein L18e/L15~TIGRFAM: ribosomal protein L15%2C bacterial/organelle gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0522 Thena_0523 Thena_0523 Thena_0523 513740 515014 + preprotein translocase%2C SecY subunit COGs: COG0201 Preprotein translocase subunit SecY~InterPro IPR002208~KEGG: dth:DICTH_0856 preprotein translocase%2C SecY subunit~PFAM: SecY protein~SPTR: Preprotein translocase%2C SecY subunit%3B~TIGRFAM: SecY protein~IMG reference gene:2504783902~PFAM: eubacterial secY protein~TIGRFAM: preprotein translocase%2C SecY subunit gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0523 Thena_0524 Thena_0524 Thena_0524 514995 515807 + methionine aminopeptidase%2C type I COGs: COG0024 Methionine aminopeptidase~InterPro IPR002467:IPR000994~KEGG: ckr:CKR_0205 hypothetical protein~PFAM: Peptidase M24%2C structural domain~PRIAM: Methionyl aminopeptidase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Peptidase M24A%2C methionine aminopeptidase%2C subfamily 1~IMG reference gene:2504783903~PFAM: Metallopeptidase family M24~TIGRFAM: methionine aminopeptidase%2C type I gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0524 Thena_0525 Thena_0525 Thena_0525 515794 516018 + Translation initiation factor IF-1 COGs: COG0361 Translation initiation factor 1 (IF-1)~HAMAP: Translation initiation factor IF-1~InterPro IPR004368:IPR006196~KEGG: lip:LI_1200 translation initiation factor IF-1~PFAM: S1%2C IF1 type~SPTR: Translation initiation factor IF-1%3B~TIGRFAM: Translation initiation factor IF-1~IMG reference gene:2504783904~PFAM: Translation initiation factor 1A / IF-1~TIGRFAM: translation initiation factor IF-1 gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0525 Thena_0526 Thena_0526 Thena_0526 516043 516156 + 50S ribosomal protein L36 HAMAP: Ribosomal protein L36~InterPro IPR000473~KEGG: dap:Dacet_0395 50S ribosomal protein L36~PFAM: Ribosomal protein L36~SPTR: 50S ribosomal protein L36%3B~TIGRFAM: Ribosomal protein L36~manually curated~IMG reference gene:2504783905~PFAM: Ribosomal protein L36~TIGRFAM: ribosomal protein L36%2C bacterial type gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0526 Thena_0527 Thena_0527 Thena_0527 516169 516540 + 30S ribosomal protein S13 COGs: COG0099 Ribosomal protein S13~InterPro IPR019980:IPR001892~KEGG: dtu:Dtur_1005 30S ribosomal protein S13~PFAM: Ribosomal protein S13~SPTR: 30S ribosomal protein S13%3B~TIGRFAM: Ribosomal protein S13%2C bacterial-type~IMG reference gene:2504783906~PFAM: Ribosomal protein S13/S18~TIGRFAM: 30S ribosomal protein S13 gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0527 Thena_0528 Thena_0528 Thena_0528 516574 516978 + 30S ribosomal protein S11 COGs: COG0100 Ribosomal protein S11~InterPro IPR019981:IPR001971~KEGG: aco:Amico_0654 30S ribosomal protein S11~PFAM: Ribosomal protein S11~SPTR: 30S ribosomal protein S11%3B~TIGRFAM: Ribosomal protein S11%2C bacterial-type~IMG reference gene:2504783907~PFAM: Ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11 gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0528 Thena_0529 Thena_0529 Thena_0529 516993 517619 + ribosomal protein S4 COGs: COG0522 Ribosomal protein S4 and related protein~InterPro IPR005709:IPR002942:IPR001912~KEGG: csc:Csac_2260 ribosomal protein S4~PFAM: Ribosomal protein S4%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: 30S ribosomal protein S4%3B~TIGRFAM: Ribosomal protein S4%2C bacterial-type~IMG reference gene:2504783908~PFAM: Ribosomal protein S4/S9 N-terminal domain%3B S4 domain~TIGRFAM: ribosomal protein S4%2C bacterial/organelle type gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0529 Thena_0530 Thena_0530 Thena_0530 517635 518660 + DNA-directed RNA polymerase subunit alpha COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit~HAMAP: DNA-directed RNA polymerase%2C alpha subunit~InterProIPR011773:IPR011263:IPR011261:IPR011262:IPR 011260~KEGG: swo:Swol_2304 DNA-directed RNA polymerase~PFAM: DNA-directed RNA polymerase%2C insert%3B DNA-directed RNA polymerase%2C dimerisation%3B RNA polymerase%2C alpha subunit%2C C-terminal~SMART: DNA-directed RNA polymerase%2C RpoA/D/Rpb3-type~SPTR: DNA-directed RNA polymerase subunit alpha%3B~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~IMG reference gene:2504783909~PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain%3B RNA polymerase Rpb3/RpoA insert domain%3B Bacterial RNA polymerase%2C alpha chain C terminal domain~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit%2C bacterial and chloroplast-type gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0530 Thena_0531 Thena_0531 Thena_0531 518650 519003 + ribosomal protein L17 COGs: COG0203 Ribosomal protein L17~InterPro IPR000456~KEGG: dth:DICTH_0865 50S ribosomal protein L17~PFAM: Ribosomal protein L17~SPTR: 50S ribosomal protein L17%3B~TIGRFAM: Ribosomal protein L17~IMG reference gene:2504783910~PFAM: Ribosomal protein L17~TIGRFAM: ribosomal protein L17 gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0531 Thena_0532 Thena_0532 Thena_0532 519052 519903 + tRNA pseudouridine synthase A COGs: COG0101 Pseudouridylate synthase~HAMAP: Pseudouridine synthase I%2C TruA~InterPro IPR001406:IPR020097~KEGG: dtu:Dtur_1013 tRNA pseudouridine synthase A~PFAM: Pseudouridine synthase I%2C TruA%2C alpha/beta domain~PRIAM: tRNA-pseudouridine synthase I~SPTR: tRNA pseudouridine synthase A%3B~TIGRFAM: Pseudouridine synthase I%2C TruA~IMG reference gene:2504783911~PFAM: tRNA pseudouridine synthase~TIGRFAM: pseudouridylate synthase I gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0532 Thena_0533 Thena_0533 Thena_0533 519942 520376 + ribosomal protein L13 COGs: COG0102 Ribosomal protein L13~InterPro IPR005823:IPR005822~KEGG: bpb:bpr_I0630 ribosomal protein L13 RplM~PFAM: Ribosomal protein L13~SPTR: 50S ribosomal protein L13%3B~TIGRFAM: Ribosomal protein L13%2C bacterial-type~IMG reference gene:2504783912~PFAM: Ribosomal protein L13~TIGRFAM: ribosomal protein L13%2C bacterial type gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0533 Thena_0534 Thena_0534 Thena_0534 520448 520852 + ribosomal protein S9 COGs: COG0103 Ribosomal protein S9~InterPro IPR000754~KEGG: bts:Btus_0186 ribosomal protein S9~PFAM: Ribosomal protein S9~SPTR: 30S ribosomal protein S9%3B~IMG reference gene:2504783913~PFAM: Ribosomal protein S9/S16 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0534 Thena_0535 Thena_0535 Thena_0535 520866 522035 + Serine--glyoxylate transaminase COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase~InterPro IPR000192~KEGG: mta:Moth_0019 serine--glyoxylate transaminase~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Serine--glyoxylate transaminase~SPTR: Serine--glyoxylate transaminase%3B~IMG reference gene:2504783914~PFAM: Aminotransferase class-V gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0535 Thena_0536 Thena_0536 Thena_0536 522036 523622 + D-3-phosphoglycerate dehydrogenase COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterPro IPR006236:IPR006139:IPR006140:IPR002912~KEGG: chy:CHY_2698 D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic region%3B Amino acid-binding ACT~PRIAM: Phosphoglycerate dehydrogenase~SPTR: D-3-phosphoglycerate dehydrogenase%3B~TIGRFAM: D-3-phosphoglycerate dehydrogenase~IMG reference gene:2504783915~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B ACT domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain~TIGRFAM: D-3-phosphoglycerate dehydrogenase gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0536 Thena_0537 Thena_0537 Thena_0537 523619 524248 + Phosphoglycerate mutase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR013078~KEGG: phosphoglycerate mutase~PFAM: Phosphoglycerate mutase~SPTR: Phosphoglycerate mutase%3B~IMG reference gene:2504783916~PFAM: Phosphoglycerate mutase family gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0537 Thena_0538 Thena_0538 Thena_0538 524276 524932 + UBA/THIF-type NAD/FAD binding protein COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1~InterPro IPR000594~KEGG: ipo:Ilyop_1695 UBA/ThiF-type NAD/FAD binding protein~PFAM: UBA/THIF-type NAD/FAD binding fold~SPTR: ThiF family protein%3B~IMG reference gene:2504783917~PFAM: ThiF family gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0538 Thena_0539 Thena_0539 Thena_0539 524993 525397 + S-adenosylmethionine decarboxylase proenzyme COGs: COG1586 S-adenosylmethionine decarboxylase~HAMAP: S-adenosylmethionine decarboxylase proenzyme~InterPro IPR017716:IPR003826~KEGG: pfu:PF1930 S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase%2C bacterial/archaeal~SPTR: S-adenosylmethionine decarboxylase proenzyme%3B~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~IMG reference gene:2504783918~PFAM: S-adenosylmethionine decarboxylase~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme%2C Bacillus form gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0539 Thena_0540 Thena_0540 Thena_0540 525455 527008 - hypothetical protein COGs: COG2187 conserved hypothetical protein~KEGG: tye:THEYE_A1962 Uma3~SPTR: Uma3%3B~IMG reference gene:2504783919~PFAM: Zeta toxin gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0540 Thena_0541 Thena_0541 Thena_0541 527178 527975 + protein of unknown function DUF815 COGs: COG2607 ATPase (AAA+ superfamily)~InterPro IPR008533~KEGG: hth:HTH_0083 hypothetical protein~PFAM: Protein of unknown function DUF815~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783920~PFAM: Protein of unknown function (DUF815) gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0541 Thena_0542 Thena_0542 Thena_0542 527986 528186 + regulatory protein%2C FmdB family InterPro IPR013429~KEGG: drt:Dret_2275 regulatory protein%2C FmdB family~PFAM: Regulatory protein%2C FmdB%2C putative~TIGRFAM: Regulatory protein%2C FmdB%2C putative~IMG reference gene:2504783921~PFAM: Zinc ribbon domain~TIGRFAM: putative regulatory protein%2C FmdB family gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0542 Thena_0543 Thena_0543 Thena_0543 528302 529351 + NADPH dehydrogenase COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family~InterPro IPR001155~KEGG: mma:MM_2395 NADH:flavin oxidoreductase~PFAM: NADH:flavin oxidoreductase/NADH oxidase%2C N-terminal~PRIAM: NADPH dehydrogenase~SPTR: NADH:flavin oxidoreductase/NADH oxidase%3B~IMG reference gene:2504783922~PFAM: NADH:flavin oxidoreductase / NADH oxidase family gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0543 Thena_0544 Thena_0544 Thena_0544 529396 529605 - pseudogene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0544 Thena_0545 Thena_0545 Thena_0545 529697 530915 - pseudogene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0545 Thena_0546 Thena_0546 Thena_0546 531139 531348 + hypothetical protein IMG reference gene:2504783925 gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0546 Thena_0547 Thena_0547 Thena_0547 531351 531992 + iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367:IPR007167~KEGG: dtu:Dtur_0541 iron (metal) dependent repressor%2C DtxR family~PFAM: Ferrous iron transporter%2C FeoA subunit%3B Iron dependent repressor~SMART: Iron dependent repressor~SPTR: Iron (Metal) dependent repressor%2C DtxR family%3B~IMG reference gene:2504783926~PFAM: FeoA domain%3B Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0547 Thena_0548 Thena_0548 Thena_0548 531982 532221 + FeoA family protein InterPro IPR007167~KEGG: dtu:Dtur_0542 FeoA family protein~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: FeoA family protein%3B~IMG reference gene:2504783927~PFAM: FeoA domain gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0548 Thena_0549 Thena_0549 Thena_0549 532218 534215 + ferrous iron transport protein B COGs: COG0370 Fe2+ transport system protein B~InterProIPR005225:IPR003373:IPR002917:IPR011619:IPR 011642:IPR011640~KEGG: dtu:Dtur_0543 ferrous iron transport protein B~PFAM: Ferrous iron transport protein B%2C N-terminal%3B GTP-binding protein%2C HSR1-related%3B Nucleoside recognition%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Ferrous iron transport protein B%3B~TIGRFAM: Ferrous iron transport protein B%3B Small GTP-binding protein~IMG reference gene:2504783928~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0549 Thena_0550 Thena_0550 Thena_0550 534226 535788 + S-layer domain-containing protein InterPro IPR001119~KEGG: vpr:Vpar_0227 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein%3B~IMG reference gene:2504783929~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0550 Thena_0551 Thena_0551 Thena_0551 535963 537330 - Integrase catalytic region InterPro IPR001584~KEGG: dau:Daud_1501 integrase catalytic subunit~PFAM: Integrase%2C catalytic core~SPTR: Integrase%2C catalytic region%3B~IMG reference gene:2504783930~PFAM: Integrase core domain gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0551 Thena_0552 Thena_0552 Thena_0552 537481 537654 + 50S ribosomal protein L33 HAMAP: Ribosomal protein L33~InterPro IPR001705~KEGG: sna:Snas_6366 50S ribosomal protein L33~PFAM: Ribosomal protein L33~SPTR: 50S ribosomal protein L33%3B~TIGRFAM: Ribosomal protein L33~IMG reference gene:2504783931~PFAM: Ribosomal protein L33~TIGRFAM: ribosomal protein L33%2C bacterial type gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0552 Thena_0553 Thena_0553 Thena_0553 537825 538052 + preprotein translocase%2C SecE subunit InterPro IPR005807:IPR001901~KEGG: hya:HY04AAS1_0252 preprotein translocase%2C SecE subunit~PFAM: Protein secE/sec61-gamma protein~SPTR: Preprotein translocase%2C SecE subunit%3B~TIGRFAM: SecE subunit of protein translocation complex~IMG reference gene:2504783933~PFAM: SecE/Sec61-gamma subunits of protein translocation complex~TIGRFAM: preprotein translocase%2C SecE subunit%2C bacterial gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0553 Thena_0554 Thena_0554 Thena_0554 538049 538588 + NusG antitermination factor COGs: COG0250 Transcription antiterminator~InterPro IPR001062:IPR006645:IPR005824~KEGG: sth:STH3091 transcriptional antiterminator~PFAM: Transcription antitermination protein%2C NusG%2C N-terminal%3B KOW~SMART: Transcription antitermination protein%2C NusG%2C N-terminal%3B KOW~SPTR: Transcriptional antiterminator%3B~TIGRFAM: Transcription antitermination protein%2C NusG~IMG reference gene:2504783934~PFAM: Transcription termination factor nusG%3B KOW motif~TIGRFAM: transcription termination/antitermination factor NusG gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0554 Thena_0555 Thena_0555 Thena_0555 538618 539064 + ribosomal protein L11 COGs: COG0080 Ribosomal protein L11~InterPro IPR006519:IPR000911:IPR020784:IPR020783~KEGG: dtu:Dtur_1374 50S ribosomal protein L11~PFAM: Ribosomal protein L11%2C N-terminal%3B Ribosomal protein L11%2C C-terminal~SMART: Ribosomal protein L11~SPTR: 50S ribosomal protein L11%3B~TIGRFAM: Ribosomal protein L11%2C bacterial-type~IMG reference gene:2504783935~PFAM: Ribosomal protein L11%2C RNA binding domain%3B Ribosomal protein L11%2C N-terminal domain~TIGRFAM: 50S ribosomal protein L11 gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0555 Thena_0556 Thena_0556 Thena_0556 539075 539794 + ribosomal protein L1 COGs: COG0081 Ribosomal protein L1~InterPro IPR005878:IPR002143~KEGG: 50S ribosomal protein L1~PFAM: Ribosomal protein L1~SPTR: 50S ribosomal protein L1%3B~TIGRFAM: Ribosomal protein L1%2C bacterial-type~IMG reference gene:2504783936~PFAM: Ribosomal protein L1p/L10e family~TIGRFAM: ribosomal protein L1%2C bacterial/chloroplast gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0556 Thena_0557 Thena_0557 Thena_0557 539953 540486 + 50S ribosomal protein L10 COGs: COG0244 Ribosomal protein L10~HAMAP: 50S ribosomal protein L10~InterPro IPR001790~KEGG: geo:Geob_3634 50S ribosomal protein L10~PFAM: Ribosomal protein L10~SPTR: 50S ribosomal protein L10%3B~IMG reference gene:2504783937~PFAM: Ribosomal protein L10 gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0557 Thena_0558 Thena_0558 Thena_0558 540566 540952 + 50S ribosomal protein L7/L12 COGs: COG0222 Ribosomal protein L7/L12~HAMAP: Ribosomal protein L7/L12~InterPro IPR000206:IPR013823~KEGG: pth:PTH_0309 50S ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12%2C C-terminal~SPTR: 50S ribosomal protein L7/L12%3B~TIGRFAM: Ribosomal protein L7/L12~IMG reference gene:2504783938~PFAM: Ribosomal protein L7/L12 C-terminal domain~TIGRFAM: ribosomal protein L7/L12 gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0558 Thena_0559 Thena_0559 Thena_0559 541052 542032 + aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395~KEGG: atu:Atu3877 aldo-keto reductase~PFAM: Aldo/keto reductase~SPTR: Probable aldoketo reductase protein%3B~IMG reference gene:2504783939~PFAM: Aldo/keto reductase family gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0559 Thena_0560 Thena_0560 Thena_0560 542057 542629 + hypothetical protein IMG reference gene:2504783940 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0560 Thena_0561 Thena_0561 Thena_0561 542675 544900 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR003660:IPR004089~KEGG: ckr:CKR_0361 hypothetical protein~PFAM: HAMP linker domain%3B Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783941~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0561 Thena_0562 Thena_0562 Thena_0562 544924 546240 + von Willebrand factor type A InterPro IPR002035~KEGG: msv:Mesil_2868 von Willebrand factor type A~PFAM: von Willebrand factor%2C type A~SMART: von Willebrand factor%2C type A~SPTR: von Willebrand factor type A%3B~IMG reference gene:2504783942~PFAM: von Willebrand factor type A domain gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0562 Thena_0563 Thena_0563 Thena_0563 546267 547709 + protein serine/threonine phosphatase COGs: COG0631 Serine/threonine protein phosphatase~InterPro IPR001932:IPR014045~KEGG: msv:Mesil_2865 protein serine/threonine phosphatase~PFAM: Protein phosphatase 2C%2C N-terminal~SMART: Protein phosphatase 2C-related~SPTR: Protein serine/threonine phosphatase%3B~IMG reference gene:2504783943~PFAM: Protein phosphatase 2C gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0563 Thena_0564 Thena_0564 Thena_0564 547728 549476 + serine/threonine protein kinase COGs: COG0790 FOG: TPR repeat SEL1 subfamily~InterPro IPR020635:IPR002290:IPR006597:IPR017442~KEGG: msv:Mesil_2867 serine/threonine protein kinase~PFAM: Serine/threonine-protein kinase-like domain%3B Sel1-like~SMART: Serine/threonine-protein kinase domain%3B Tyrosine-protein kinase%2C subgroup%2C catalytic domain%3B Sel1-like~SPTR: Serine/threonine protein kinase%3B~IMG reference gene:2504783944~PFAM: Protein kinase domain%3B Sel1 repeat gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0564 Thena_0565 Thena_0565 Thena_0565 549816 551504 + acetolactate synthase%2C large subunit%2C biosynthetic type COGs: COG0028 Thiamine pyrophosphate-requiring protein~InterPro IPR012846:IPR012001:IPR012000:IPR011766~KEGG: hor:Hore_10830 acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: Thiamine pyrophosphate enzyme%2C N-terminal TPP binding region%3B Thiamine pyrophosphate enzyme%2C central region%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: Acetolactate synthase~SPTR: Acetolactate synthase%2C large subunit%2C biosynthetic type%3B~TIGRFAM: Acetolactate synthase%2C large subunit%2C biosynthetic~IMG reference gene:2504783945~PFAM: Thiamine pyrophosphate enzyme%2C central domain%3B Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0565 Thena_0566 Thena_0566 Thena_0566 551501 551974 + acetolactate synthase%2C small subunit COGs: COG0440 Acetolactate synthase small (regulatory) subunit~InterPro IPR004789:IPR002912:IPR019455~KEGG: chy:CHY_0518 acetolactate synthase 3 regulatory subunit~PFAM: Acetolactate synthase%2C small subunit%2C C-terminal%3B Amino acid-binding ACT~SPTR: Acetolactate synthase%2C small subunit%3B~TIGRFAM: Acetolactate synthase%2C small subunit~IMG reference gene:2504783946~PFAM: ACT domain%3B Small subunit of acetolactate synthase~TIGRFAM: acetolactate synthase%2C small subunit gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0566 Thena_0567 Thena_0567 Thena_0567 552049 553050 + Ketol-acid reductoisomerase COGs: COG0059 Ketol-acid reductoisomerase~HAMAP: Ketol-acid reductoisomerase~InterPro IPR013023:IPR013116:IPR000506~KEGG: mta:Moth_1350 ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase%2C catalytic%3B Acetohydroxy acid isomeroreductase C-terminal~PRIAM: Ketol-acid reductoisomerase~SPTR: Ketol-acid reductoisomerase%3B~TIGRFAM: Acetohydroxy acid isomeroreductase~IMG reference gene:2504783947~PFAM: Acetohydroxy acid isomeroreductase%2C catalytic domain~TIGRFAM: ketol-acid reductoisomerase gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0567 Thena_0568 Thena_0568 Thena_0568 553063 554586 + 2-isopropylmalate synthase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR005671:IPR000891:IPR013709~KEGG: tjr:TherJR_0363 2-isopropylmalate synthase~PFAM: Pyruvate carboxyltransferase%3B 2-isopropylmalate synthase LeuA%2C allosteric (dimerisation) domain~PRIAM: 2-isopropylmalate synthase~SPTR: 2-isopropylmalate synthase%3B~TIGRFAM: Bacterial 2-isopropylmalate synthase~IMG reference gene:2504783948~PFAM: LeuA allosteric (dimerisation) domain%3B HMGL-like~TIGRFAM: 2-isopropylmalate synthase%2C bacterial type gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0568 Thena_0569 Thena_0569 Thena_0569 554781 555713 + hypothetical protein COGs: COG4972 Tfp pilus assembly protein ATPase PilM~KEGG: dae:Dtox_3253 type IV pilus assembly protein PilM~SPTR: Type IV pilus assembly protein PilM%3B~IMG reference gene:2504783949~PFAM: Competence protein A gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0569 Thena_0570 Thena_0570 Thena_0570 555703 556269 + Fimbrial assembly family protein InterPro IPR007813~KEGG: sde:Sde_2690 periplasmic sensor signal transduction histidine kinase~PFAM: Fimbrial assembly~SPTR: Fimbrial assembly%3B~IMG reference gene:2504783950~PFAM: Fimbrial assembly protein (PilN) gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0570 Thena_0571 Thena_0571 Thena_0571 556266 556991 + hypothetical protein IMG reference gene:2504783951 gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0571 Thena_0572 Thena_0572 Thena_0572 557003 557521 + hypothetical protein KEGG: dtu:Dtur_1034 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783952~PFAM: Type IV pilus biogenesis gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0572 Thena_0573 Thena_0573 Thena_0573 557541 559433 + type II and III secretion system protein COGs: COG1450 Type II secretory pathway component PulD~InterPro IPR011662:IPR005644:IPR004846~KEGG: amr:AM1_1398 secretion system protein~PFAM: Type II/III secretion system%3B Secretin/TonB%2C short N-terminal%3B NolW-like~SPTR: Putative secretin and TonB short domain protein%3B~IMG reference gene:2504783953~PFAM: Bacterial type II/III secretion system short domain%3B Secretin and TonB N terminus short domain%3B Bacterial type II and III secretion system protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0573 Thena_0574 Thena_0574 Thena_0574 559433 560242 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: eat:EAT1b_1923 polysaccharide deacetylase~PFAM: Polysaccharide deacetylase~SPTR: Polysaccharide deacetylase%3B~IMG reference gene:2504783954~PFAM: Polysaccharide deacetylase gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0574 Thena_0575 Thena_0575 Thena_0575 560258 560716 + UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: dvm:DvMF_0804 UspA domain protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504783955~PFAM: Universal stress protein family gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0575 Thena_0576 Thena_0576 Thena_0576 560706 561806 - Phosphatidylinositol alpha-mannosyltransferase COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: sti:Sthe_0282 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~PRIAM: Phosphatidylinositol alpha-mannosyltransferase~SPTR: Glycosyl transferase group 1%3B~IMG reference gene:2504783956~PFAM: Glycosyl transferases group 1 gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0576 Thena_0577 Thena_0577 Thena_0577 561803 562669 - lipid A biosynthesis acyltransferase COGs: COG1560 Lauroyl/myristoyl acyltransferase~InterPro IPR004960~KEGG: lipid A biosynthesis acyltransferase~PFAM: Bacterial lipid A biosynthesis acyltransferase~SPTR: Lauroyl/myristoyl acyltransferase%3B~IMG reference gene:2504783957~PFAM: Bacterial lipid A biosynthesis acyltransferase gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0577 Thena_0578 Thena_0578 Thena_0578 562722 563300 - CDP-alcohol phosphatidyltransferase COGs: COG0558 Phosphatidylglycerophosphate synthase~InterPro IPR000462~KEGG: saf:SULAZ_1542 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~SPTR: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase%3B~IMG reference gene:2504783958~PFAM: CDP-alcohol phosphatidyltransferase gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0578 Thena_0579 Thena_0579 Thena_0579 563287 564021 - PHP domain protein COGs: COG0613 metal-dependent phosphoesterase (PHP family)~InterPro IPR003141:IPR004013~KEGG: chl:Chy400_3245 PHP domain protein~PFAM: PHP%2C C-terminal~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: PHP domain protein%3B~IMG reference gene:2504783959~PFAM: PHP domain gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0579 Thena_0580 Thena_0580 Thena_0580 564014 564745 - pseudogene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0580 Thena_0581 Thena_0581 Thena_0581 564792 565856 - Myo-inositol-1-phosphate synthase COGs: COG1260 Myo-inositol-1-phosphate synthase~InterPro IPR002587:IPR013021~KEGG: tbi:Tbis_3568 inositol 1-phosphate synthase~PFAM: Myo-inositol-1-phosphate synthase%3B Myo-inositol-1-phosphate synthase%2C GAPDH-like~SPTR: Inositol 1-phosphate synthase%3B~IMG reference gene:2504783961~PFAM: Myo-inositol-1-phosphate synthase gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0581 Thena_0582 Thena_0582 Thena_0582 565844 566515 - PHP domain protein COGs: COG0613 metal-dependent phosphoesterase (PHP family)~InterPro IPR003141:IPR004013~KEGG: ttm:Tthe_2569 PHP domain protein~PFAM: PHP%2C C-terminal~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: PHP domain protein%3B~IMG reference gene:2504783962~PFAM: PHP domain gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0582 Thena_0583 Thena_0583 Thena_0583 566512 567159 - DNA-(apurinic or apyrimidinic site) lyase COGs: COG0177 EndoIII-related endonuclease~InterPro IPR003265:IPR003651~KEGG: rxy:Rxyl_2676 DNA-(apurinic or apyrimidinic site) lyase/endonuclease III~PFAM: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~PRIAM: DNA-(apurinic or apyrimidinic site) lyase~SMART: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~SPTR: DNA-(Apurinic or apyrimidinic site) lyase / endonuclease III%3B~IMG reference gene:2504783963~PFAM: HhH-GPD superfamily base excision DNA repair protein%3B Iron-sulfur binding domain of endonuclease III~TIGRFAM: endonuclease III gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0583 Thena_0584 Thena_0584 Thena_0584 567165 569330 - Polyribonucleotide nucleotidyltransferase COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)~HAMAP: Polyribonucleotide nucleotidyltransferase~InterProIPR012162:IPR004087:IPR001247:IPR015847:IPR 015848:IPR018111:IPR003029~KEGG: hmo:HM1_2322 polynucleotide phosphorylase/polyadenylase~PFAM: Exoribonuclease%2C phosphorolytic domain 1%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%2C bacterial/organelle-type%3B K Homology%2C type 1%2C subgroup%3B Ribosomal protein S1%2C RNA binding domain~PRIAM: Polyribonucleotide nucleotidyltransferase~SPTR: Polyribonucleotide nucleotidyltransferase%3B~TIGRFAM: Polyribonucleotide nucleotidyltransferase~IMG reference gene:2504783964~PFAM: KH domain%3B S1 RNA binding domain%3B 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2%3B Polyribonucleotide nucleotidyltransferase%2C RNA binding domain~TIGRFAM: polyribonucleotide nucleotidyltransferase gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0584 Thena_0585 Thena_0585 Thena_0585 569330 569602 - ribosomal protein S15 COGs: COG0184 Ribosomal protein S15P/S13E~InterPro IPR005290:IPR000589~KEGG: hor:Hore_07890 ribosomal protein S15~PFAM: Ribosomal protein S15~SPTR: 30S ribosomal protein S15%3B~TIGRFAM: Ribosomal protein S15%2C bacterial-type~IMG reference gene:2504783965~PFAM: Ribosomal protein S15~TIGRFAM: ribosomal protein S15%2C bacterial/organelle gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0585 Thena_0586 Thena_0586 Thena_0586 569766 570170 + Resolvase RNase H domain protein fold protein InterPro IPR006641~KEGG: has:Halsa_0430 resolvase RNase H domain protein fold protein~SMART: Resolvase%2C RNase H-like fold~SPTR: Resolvase RNase H domain protein fold protein%3B~IMG reference gene:2504783966~PFAM: Uncharacterised protein family (UPF0081) gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0586 Thena_0587 Thena_0587 Thena_0587 570160 570618 + dCMP deaminase COGs: COG2131 Deoxycytidylate deaminase~InterPro IPR002125~KEGG: cth:Cthe_2599 CMP/dCMP deaminase%2C zinc-binding~PFAM: CMP/dCMP deaminase%2C zinc-binding~PRIAM: dCMP deaminase~SPTR: CMP/dCMP deaminase%2C zinc-binding protein%3B~IMG reference gene:2504783967~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0587 Thena_0588 Thena_0588 Thena_0588 570625 571644 + Glycosyl transferase%2C family 4%2C conserved region-containing protein COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~InterPro IPR018481~KEGG: ssp:SSP1969 putative glycosyl transferase~PFAM: Glycosyl transferase%2C family 4%2C conserved region~SPTR: Putative glycosyl transferase%3B~IMG reference gene:2504783968~PFAM: Glycosyl transferase family 4 gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0588 Thena_0589 Thena_0589 Thena_0589 571637 572806 + UDP-N-acetylglucosamine 2-epimerase COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase~InterPro IPR003331~KEGG: chy:CHY_2554 UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~PRIAM: UDP-N-acetylglucosamine 2-epimerase~SPTR: UDP-N-acetylglucosamine 2-epimerase%3B~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase~IMG reference gene:2504783969~PFAM: UDP-N-acetylglucosamine 2-epimerase~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0589 Thena_0590 Thena_0590 Thena_0590 572795 573436 - protein of unknown function DUF1121 InterPro IPR009501~KEGG: cno:NT01CX_1623 hypothetical protein~PFAM: Protein of unknown function DUF1121~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783970~PFAM: Uncharacterised ACR%2C YkgG family COG1556 gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0590 Thena_0591 Thena_0591 Thena_0591 573773 573991 + hypothetical protein IMG reference gene:2504783971 gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0591 Thena_0592 Thena_0592 Thena_0592 574008 574763 + ATP synthase subunit a COGs: COG0356 F0F1-type ATP synthase subunit a~HAMAP: ATP synthase subunit a~InterPro IPR000568~KEGG: nde:NIDE3734 ATP synthase F0 subunit A~PFAM: ATPase%2C F0 complex%2C subunit A~SPTR: ATP synthase F0%2C A subunit%3B~TIGRFAM: ATPase%2C F0 complex%2C subunit A~IMG reference gene:2504783972~PFAM: ATP synthase A chain~TIGRFAM: ATP synthase subunit 6 (eukaryotes)%2Calso subunit A (prokaryotes) gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0592 Thena_0593 Thena_0593 Thena_0593 574823 575074 + ATP synthase subunit c HAMAP: ATPase%2C F0 complex%2C subunit C~InterPro IPR000454:IPR005953:IPR002379~KEGG: chy:CHY_2550 ATP synthase F0 subunit C~PFAM: ATPase%2C F0/V0 complex%2C subunit C~SPTR: ATP synthase subunit c%3B~TIGRFAM: ATPase%2C F0 complex%2C subunit C%2C bacterial/chloroplast~IMG reference gene:2504783973~PFAM: ATP synthase subunit C~TIGRFAM: ATP synthase%2C F0 subunit c gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0593 Thena_0594 Thena_0594 Thena_0594 575106 575591 + ATP synthase subunit b COGs: COG0711 F0F1-type ATP synthase subunit b~HAMAP: ATP synthase subunit b~InterPro IPR005864:IPR002146~KEGG: gmc:GY4MC1_3702 ATP synthase F0%2C B subunit~PFAM: ATPase%2C F0 complex%2C subunit B/B'%2C bacterial/chloroplast~SPTR: ATP synthase F0%2C B subunit%3B~TIGRFAM: ATPase%2C F0 complex%2C subunit B%2C bacterial~IMG reference gene:2504783974~PFAM: ATP synthase B/B' CF(0)~TIGRFAM: ATP synthase%2C F0 subunit b gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0594 Thena_0595 Thena_0595 Thena_0595 575593 576135 + ATP synthase subunit delta COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein)~HAMAP: ATPase%2C F1 complex%2C OSCP/delta subunit~InterPro IPR000711~KEGG: pmh:P9215_17201 F0F1 ATP synthase subunit delta~PFAM: ATPase%2C F1 complex%2C OSCP/delta subunit~SPTR: ATP synthase subunit delta%3B~TIGRFAM: ATPase%2C F1 complex%2C OSCP/delta subunit~IMG reference gene:2504783975~PFAM: ATP synthase delta (OSCP) subunit~TIGRFAM: ATP synthase%2C F1 delta subunit gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0595 Thena_0596 Thena_0596 Thena_0596 576153 577667 + ATP synthase subunit alpha COGs: COG0056 F0F1-type ATP synthase alpha subunit~HAMAP: ATPase%2C F1 complex%2C alpha subunit~InterPro IPR005294:IPR004100:IPR000194:IPR000793~KEGG: ddf:DEFDS_1888 F0F1-type ATP synthase subunit alpha~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C N-terminal%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C C-terminal~SPTR: ATP synthase subunit alpha%3B~TIGRFAM: ATPase%2C F1 complex%2C alpha subunit~IMG reference gene:2504783976~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: proton translocating ATP synthase%2C F1 alpha subunit gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0596 Thena_0597 Thena_0597 Thena_0597 577669 578529 + ATP synthase gamma chain COGs: COG0224 F0F1-type ATP synthase gamma subunit~HAMAP: ATP synthase gamma chain~InterPro IPR000131~KEGG: llo:LLO_3420 H+-transporting ATP synthase chain gamma~PFAM: ATPase%2C F1 complex%2C gamma subunit~SPTR: ATP synthase gamma chain%3B~TIGRFAM: ATPase%2C F1 complex%2C gamma subunit~IMG reference gene:2504783977~PFAM: ATP synthase~TIGRFAM: ATP synthase%2C F1 gamma subunit gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0597 Thena_0598 Thena_0598 Thena_0598 578540 579961 + ATP synthase subunit beta COGs: COG0055 F0F1-type ATP synthase beta subunit~HAMAP: ATPase%2C F1 complex%2C beta subunit~InterProIPR005722:IPR003593:IPR004100:IPR000194:IPR 000793~KEGG: chy:CHY_2545 F0F1 ATP synthase subunit beta~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C N-terminal%3B ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATP synthase F1%2C beta subunit%3B~TIGRFAM: ATPase%2C F1 complex%2C beta subunit~IMG reference gene:2504783978~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATP synthase%2C F1 beta subunit gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0598 Thena_0599 Thena_0599 Thena_0599 579974 580402 + ATP synthase epsilon chain COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit)~HAMAP: ATPase%2C F1 complex%2C delta/epsilon subunit~InterPro IPR001469:IPR020546:IPR020547~KEGG: adg:Adeg_0084 ATP synthase F1%2C epsilon subunit~PFAM: ATPase%2C F1 complex%2C delta/epsilon subunit%2C N-terminal%3B ATPase%2C F1 complex%2C delta/epsilon subunit%2C C-terminal~SPTR: ATP synthase epsilon chain%3B~TIGRFAM: ATPase%2C F1 complex%2C delta/epsilon subunit~IMG reference gene:2504783979~PFAM: ATP synthase%2C Delta/Epsilon chain%2C beta-sandwich domain%3B ATP synthase%2C Delta/Epsilon chain%2C long alpha-helix domain~TIGRFAM: ATP synthase%2C F1 epsilon subunit (delta in mitochondria) gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0599 Thena_0600 Thena_0600 Thena_0600 580489 581706 + UDP-N-acetylglucosamine1-carboxyvinyltransferase COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase~HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~InterPro IPR005750:IPR001986~KEGG: toc:Toce_2016 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C core~PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2%3B~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~IMG reference gene:2504783980~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0600 Thena_0601 Thena_0601 Thena_0601 581718 582788 + hypothetical protein KEGG: has:Halsa_0453 sporulation domain-containing protein~SPTR: Sporulation domain-containing protein%3B~IMG reference gene:2504783981~PFAM: Predicted periplasmic protein (DUF2233) gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0601 Thena_0602 Thena_0602 Thena_0602 582846 584246 + Phosphoglucosamine mutase COGs: COG1109 Phosphomannomutase~InterPro IPR005844:IPR005845:IPR005846:IPR005843~KEGG: aae:aq_501 phosphoglucomutase/phosphomannomutase~PFAM: Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain I%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain II%3B Alpha-D-phosphohexomutase%2C alpha/beta/alpha domain III%3B Alpha-D-phosphohexomutase%2C C-terminal~PRIAM: Phosphoglucosamine mutase~SPTR: Phosphoglucomutase/phosphomannomutase%3B~IMG reference gene:2504783982~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0602 Thena_0603 Thena_0603 Thena_0603 584263 585861 - RNA-metabolising metallo-beta-lactamase COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily~InterPro IPR011108~KEGG: toc:Toce_1227 RNA-metabolising metallo-beta-lactamase~PFAM: RNA-metabolising metallo-beta-lactamase~SPTR: RNA-metabolising metallo-beta-lactamase%3B~IMG reference gene:2504783983~PFAM: Metallo-beta-lactamase superfamily%3B RNA-metabolising metallo-beta-lactamase~TIGRFAM: conserved hypothetical protein gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0603 Thena_0604 Thena_0604 Thena_0604 586079 586558 + Ribosome maturation factor rimP HAMAP: Uncharacterised protein family UPF0090%2C bacteria~InterPro IPR020790:IPR003728~KEGG: cdl:CDR20291_1147 hypothetical protein~PFAM: Uncharacterised protein family UPF0090~SPTR: Ribosome maturation factor rimP%3B~IMG reference gene:2504783984~PFAM: Uncharacterised BCR%2C YhbC family COG0779 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0604 Thena_0605 Thena_0605 Thena_0605 586555 587577 + NusA antitermination factor COGs: COG0195 Transcription elongation factor~InterPro IPR010213:IPR013735~KEGG: tte:TTE1396 transcription elongation factor NusA~PFAM: Transcription factor NusA%2C N-terminal~SPTR: Transcription terminator%3B~TIGRFAM: Transcription termination factor NusA~IMG reference gene:2504783985~PFAM: NusA N-terminal domain~TIGRFAM: transcription termination factor NusA gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0605 Thena_0606 Thena_0606 Thena_0606 587585 587869 + protein of unknown function DUF448 COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination~InterPro IPR007393~KEGG: cow:Calow_0867 hypothetical protein~PFAM: Protein of unknown function DUF448~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504783986~PFAM: Protein of unknown function (DUF448) gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0606 Thena_0607 Thena_0607 Thena_0607 587870 589936 + translation initiation factor IF-2 COGs: COG0532 Translation initiation factor 2 (IF-2%3B GTPase)~InterProIPR000178:IPR005225:IPR006847:IPR000795:IPR 004161~KEGG: toc:Toce_1237 bacterial translation initiation factor 2 (bIF-2)~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation initiation factor IF-2%2C N-terminal%3B Translation elongation factor EFTu/EF1A%2C domain 2~SPTR: Translation initiation factor IF-2%3B~TIGRFAM: Initiation factor 2%3B Small GTP-binding protein~IMG reference gene:2504783987~PFAM: Elongation factor Tu domain 2%3B Translation-initiation factor 2%3B Translation initiation factor IF-2%2C N-terminal region%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation initiation factor IF-2 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0607 Thena_0608 Thena_0608 Thena_0608 590037 590315 + protein of unknown function DUF503 InterPro IPR007546~PFAM: Protein of unknown function DUF503~IMG reference gene:2504783988~PFAM: Protein of unknown function (DUF503) gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0608 Thena_0609 Thena_0609 Thena_0609 590357 590695 + Ribosome-binding factor A COGs: COG0858 Ribosome-binding factor A~HAMAP: Ribosome-binding factor A~InterPro IPR000238~KEGG: tte:TTE1392 ribosome-binding factor A~PFAM: Ribosome-binding factor A~SPTR: Ribosome-binding factor A%3B~TIGRFAM: Ribosome-binding factor A~IMG reference gene:2504783989~PFAM: Ribosome-binding factor A~TIGRFAM: ribosome-binding factor A gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0609 Thena_0610 Thena_0610 Thena_0610 590711 591670 + phosphoesterase RecJ domain protein COGs: COG0618 Exopolyphosphatase-related protein~InterPro IPR001667:IPR003156~KEGG: pth:PTH_1271 exopolyphosphatase-related proteins~PFAM: Phosphoesterase%2C RecJ-like%3B Phosphoesterase%2C DHHA1~SPTR: Exopolyphosphatase-related proteins%3B~manually curated~IMG reference gene:2504783990~PFAM: DHH family%3B DHHA1 domain gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0610 Thena_0611 Thena_0611 Thena_0611 591663 592568 + tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase~HAMAP: tRNA pseudouridine synthase B~InterPro IPR014780:IPR002501~KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B~PFAM: Pseudouridine synthase II%2C TruB%2C N-terminal~SPTR: tRNA pseudouridine synthase B%3B~TIGRFAM: Pseudouridine synthase II%2C TruB%2C N-terminal%2C bacterial-type~IMG reference gene:2504783991~PFAM: Pseudouridine synthase II TruB%2C C-terminal%3B TruB family pseudouridylate synthase (N terminal domain)~TIGRFAM: tRNA pseudouridine 55 synthase gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0611 Thena_0612 Thena_0612 Thena_0612 592565 593488 + riboflavin biosynthesis protein RibF COGs: COG0196 FAD synthase~InterPro IPR004821:IPR002606:IPR015864:IPR015865~KEGG: mtt:Ftrac_0781 riboflavin biosynthesis protein RibF~PFAM: Riboflavin kinase%3B FAD synthetase~PRIAM: FAD synthetase.%2C Riboflavin kinase~SPTR: Riboflavin biosynthesis protein RibF%3B~TIGRFAM: Riboflavin kinase/FAD synthetase%3B Cytidyltransferase-related~IMG reference gene:2504783992~PFAM: Riboflavin kinase%3B FAD synthetase~TIGRFAM: riboflavin kinase/FMN adenylyltransferase gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0612 Thena_0613 Thena_0613 Thena_0613 593507 593890 - chorismate mutase COGs: COG4401 Chorismate mutase~InterPro IPR008243~KEGG: afl:Aflv_1100 chorismate mutase~PFAM: Chorismate mutase%2C AroH class~SPTR: AroH%3B~TIGRFAM: Chorismate mutase%2C AroH class~IMG reference gene:2504783993~PFAM: Chorismate mutase type I~TIGRFAM: monofunctional chorismate mutase%2C gram positive type%2C clade 1 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0613 Thena_0614 Thena_0614 Thena_0614 594000 594863 + Bifunctional protein folD COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase~HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase~InterPro IPR000672:IPR020630:IPR020631~KEGG: ere:EUBREC_1957 methylenetetrahydrofolate dehydrogenase (NADP(+))~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain~PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+))~SPTR: Bifunctional protein folD%3B~IMG reference gene:2504783994~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0614 Thena_0615 Thena_0615 Thena_0615 594850 595899 + Histidinol-phosphate aminotransferase COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~HAMAP: Histidinol-phosphate aminotransferase~InterPro IPR005861:IPR004839~KEGG: pth:PTH_2537 histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~PFAM: Aminotransferase%2C class I/II~PRIAM: Histidinol-phosphate transaminase~SPTR: Histidinol-phosphate aminotransferase%3B~TIGRFAM: Histidinol-phosphate aminotransferase~IMG reference gene:2504783995~PFAM: Aminotransferase class I and II~TIGRFAM: histidinol-phosphate aminotransferase gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0615 Thena_0616 Thena_0616 Thena_0616 595892 596701 + hypothetical protein KEGG: hje:HacjB3_13395 HAD superfamily (subfamily IA) hydrolase%2C TIGR01548~SPTR: HAD superfamily (Subfamily IA) hydrolase%2C TIGR01548%3B~IMG reference gene:2504783996 gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0616 Thena_0617 Thena_0617 Thena_0617 596772 597380 + Imidazoleglycerol-phosphate dehydratase COGs: COG0131 Imidazoleglycerol-phosphate dehydratase~HAMAP: Imidazoleglycerol-phosphate dehydratase~InterPro IPR000807~KEGG: paa:Paes_0820 imidazoleglycerol-phosphate dehydratase~PFAM: Imidazoleglycerol-phosphate dehydratase~PRIAM: Imidazoleglycerol-phosphate dehydratase~SPTR: Imidazoleglycerol-phosphate dehydratase%3B~IMG reference gene:2504783997~PFAM: Imidazoleglycerol-phosphate dehydratase gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0617 Thena_0618 Thena_0618 Thena_0618 597380 597988 + Imidazole glycerol phosphate synthase subunit hisH COGs: COG0118 Glutamine amidotransferase~HAMAP: Imidazole glycerol phosphate synthase%2C subunit H~InterPro IPR000991:IPR010139~KEGG: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: Glutamine amidotransferase class-I%2C C-terminal~SPTR: Imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit%3B~TIGRFAM: Imidazole glycerol phosphate synthase%2C subunit H~IMG reference gene:2504783998~PFAM: Glutamine amidotransferase class-I~TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0618 Thena_0619 Thena_0619 Thena_0619 598078 598785 + 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase~HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase~InterPro IPR006062~KEGG: saf:SULAZ_0090 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase~PFAM: Histidine biosynthesis~PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase~SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase%3B~IMG reference gene:2504783999~PFAM: Histidine biosynthesis protein~TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0619 Thena_0620 Thena_0620 Thena_0620 598788 600176 + amidophosphoribosyltransferase COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase~InterPro IPR000583:IPR000836:IPR005854~KEGG: slp:Slip_0602 amidophosphoribosyltransferase~PFAM: Glutamine amidotransferase%2C class-II%3B Phosphoribosyltransferase~PRIAM: Amidophosphoribosyltransferase~SPTR: Amidophosphoribosyltransferase%3B~TIGRFAM: Amidophosphoribosyl transferase~IMG reference gene:2504784000~PFAM: Phosphoribosyl transferase domain%3B Glutamine amidotransferases class-II~TIGRFAM: amidophosphoribosyltransferase gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0620 Thena_0621 Thena_0621 Thena_0621 600240 601256 + phosphoribosylformylglycinamidine cyclo-ligase COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase~InterPro IPR000728:IPR010918:IPR004733~KEGG: ckn:Calkro_1263 phosphoribosylformylglycinamidine cyclo-ligase~PFAM: AIR synthase related protein%2C C-terminal%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase~SPTR: Phosphoribosylformylglycinamidine cyclo-ligase%3B~TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase~IMG reference gene:2504784001~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylaminoimidazole synthetase gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0621 Thena_0622 Thena_0622 Thena_0622 601249 601851 + phosphoribosylglycinamide formyltransferase COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN~InterPro IPR002376:IPR004607~KEGG: tye:THEYE_A0805 phosphoribosylglycinamide formyltransferase~PFAM: Formyl transferase%2C N-terminal~PRIAM: Phosphoribosylglycinamide formyltransferase~SPTR: Phosphoribosylglycinamide formyltransferase%3B~TIGRFAM: Phosphoribosylglycinamide formyltransferase~IMG reference gene:2504784002~PFAM: Formyl transferase~TIGRFAM: phosphoribosylglycinamide formyltransferase%2C formyltetrahydrofolate-dependent gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0622 Thena_0623 Thena_0623 Thena_0623 601882 603378 + phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)~InterPro IPR011607:IPR013982:IPR002695~KEGG: cow:Calow_1224 phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme%2C formylation region%3B MGS-like~PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase~SMART: AICARFT/IMPCHase bienzyme%2C formylation region~SPTR: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase%3B~TIGRFAM: AICARFT/IMPCHase bienzyme~IMG reference gene:2504784003~PFAM: AICARFT/IMPCHase bienzyme%3B MGS-like domain~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0623 Thena_0624 Thena_0624 Thena_0624 603428 604660 + Phosphoribosylamine--glycine ligase COGs: COG0151 Phosphoribosylamine-glycine ligase~HAMAP: Phosphoribosylglycinamide synthetase~InterPro IPR020562:IPR020561:IPR020560:IPR000115~KEGG: aae:aq_742 phosphoribosylamine--glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C N-domain%3B Phosphoribosylglycinamide synthetase%2C C-domain~PRIAM: Phosphoribosylamine--glycine ligase~SPTR: Phosphoribosylamine--glycine ligase%3B~TIGRFAM: Phosphoribosylglycinamide synthetase~IMG reference gene:2504784004~PFAM: Phosphoribosylglycinamide synthetase%2C N domain%3B Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C C domain~TIGRFAM: phosphoribosylamine--glycine ligase gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0624 Thena_0625 Thena_0625 Thena_0625 604657 605148 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase~InterPro IPR000031~KEGG: pho:PH0320 phosphoribosylaminoimidazole carboxylase catalytic subunit~PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~PRIAM: Phosphoribosylaminoimidazole carboxylase~SPTR: N5-carboxyaminoimidazole ribonucleotide mutase%3B~TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~IMG reference gene:2504784005~PFAM: AIR carboxylase~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C PurE protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0625 Thena_0626 Thena_0626 Thena_0626 605149 605952 + hypothetical protein KEGG: tte:TTE0750 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784006~PFAM: Protein of unknown function (DUF2837) gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0626 Thena_0627 Thena_0627 Thena_0627 605994 606293 + Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit~HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C~InterPro IPR003837~KEGG: ddf:DEFDS_1950 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C~PFAM: Glu-tRNAGln amidotransferase%2C C subunit~SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C%3B~TIGRFAM: Glu-tRNAGln amidotransferase%2C C subunit~IMG reference gene:2504784007~PFAM: Glu-tRNAGln amidotransferase C subunit~TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C C subunit gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0627 Thena_0628 Thena_0628 Thena_0628 606283 607728 + Glutamyl-tRNA(Gln) amidotransferase subunit A COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit~InterPro IPR000120:IPR004412~KEGG: chy:CHY_1102 aspartyl/glutamyl-tRNA amidotransferase subunit A~PFAM: Amidase~SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A%3B~TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit~IMG reference gene:2504784008~PFAM: Amidase~TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C A subunit gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0628 Thena_0629 Thena_0629 Thena_0629 607733 609184 + Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)~HAMAP: Glutamyl-tRNA(Gln) amidotransferase%2C B subunit~InterPro IPR006075:IPR006107:IPR018027:IPR004413~KEGG: dtu:Dtur_1167 glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: Glutamyl-tRNA(Gln) amidotransferase%2C subunit B/E%2C N-terminal%3B Glutamyl-tRNA(Gln) amidotransferase%2C subunit B/E%2C central region%3B Asn/Gln amidotransferase~SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B%3B~TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase%2C B subunit~IMG reference gene:2504784009~PFAM: GatB/GatE catalytic domain%3B GatB domain~TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C B subunit gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0629 Thena_0630 Thena_0630 Thena_0630 609211 609816 + Tetratricopeptide TPR_2 repeat-containing protein InterPro IPR013105:IPR019734~KEGG: mmq:MmarC5_0693 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR2~SPTR: Tetratricopeptide TPR_2 repeat protein%3B~IMG reference gene:2504784010~PFAM: Tetratricopeptide repeat gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0630 Thena_0631 Thena_0631 Thena_0631 609797 610219 + Holliday junction resolvase COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)~HAMAP: Holliday junction resolvase~InterPro IPR005227:IPR006641~KEGG: pub:SAR11_1079 putative Holliday junction resolvase~PFAM: Resolvase%2C holliday junction-type%2C YqgF-like~SMART: Resolvase%2C RNase H-like fold~SPTR: Putative Holliday junction resolvase%3B~TIGRFAM: Resolvase%2C holliday junction-type%2C YqgF-like~IMG reference gene:2504784011~PFAM: Uncharacterised protein family (UPF0081)~TIGRFAM: RNAse H-fold protein YqgF gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0631 Thena_0632 Thena_0632 Thena_0632 610209 610424 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: apo:Arcpr_1028 RNA polymerase insert~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: DNA-directed RNA polymerase subunit D%3B~IMG reference gene:2504784012~PFAM: 4Fe-4S binding domain gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0632 Thena_0633 Thena_0633 Thena_0633 610424 611800 + Cobyrinic acid A%2CC-diamide synthase COGs: COG1797 Cobyrinic acid a c-diamide synthase~HAMAP: Cobyrinic acid A%2CC-diamide synthase~InterPro IPR002586:IPR011698:IPR004484~KEGG: dae:Dtox_0078 cobyrinic acid a%2Cc-diamide synthase~PFAM: CobB/CobQ-like glutamine amidotransferase%3B Cobyrinic acid a%2Cc-diamide synthase~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~TIGRFAM: Cobyrinic acid a%2Cc-diamide synthase CbiA~IMG reference gene:2504784013~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: cobyrinic acid a%2Cc-diamide synthase gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0633 Thena_0634 Thena_0634 Thena_0634 611869 612180 + hypothetical protein IMG reference gene:2504784014 gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0634 Thena_0635 Thena_0635 Thena_0635 612204 612677 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)~InterPro IPR001450~KEGG: ebw:BWG_2252 hydrogenase 4 subunit H~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~IMG reference gene:2504784015 gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0635 Thena_0636 Thena_0636 Thena_0636 612702 613643 - respiratory-chain NADH dehydrogenase subunit 1 COGs: COG0650 Formate hydrogenlyase subunit 4~InterPro IPR001694~KEGG: azl:AZL_b04740 NADH dehydrogenase I chain H~PFAM: NADH:ubiquinone oxidoreductase%2C subunit 1~SPTR: NADH dehydrogenase I chain H%3B~IMG reference gene:2504784016~PFAM: NADH dehydrogenase gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0636 Thena_0637 Thena_0637 Thena_0637 613640 614062 - NADH ubiquinone oxidoreductase 20 kDa subunit COGs: COG3260 Ni Fe-hydrogenase III small subunit~InterPro IPR006137~KEGG: cpo:COPRO5265_0922 hydrogenase-4 component I~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~SPTR: Hydrogenase-4 component I%3B~IMG reference gene:2504784017~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0637 Thena_0638 Thena_0638 Thena_0638 614064 615353 - NADH/Ubiquinone/plastoquinone (complex I) COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N)~InterPro IPR001750~KEGG: cni:Calni_0530 NADH/ubiquinone/plastoquinone (complex i)~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~SPTR: NADH/Ubiquinone/plastoquinone (Complex I)%3B~IMG reference gene:2504784018~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0638 Thena_0639 Thena_0639 Thena_0639 615369 617255 - NADH dehydrogenase (quinone) COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit~InterPro IPR001516:IPR001750~KEGG: azl:AZL_b04710 NADH dehydrogenase I chain L~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase%3B NADH:ubiquinone oxidoreductase%2C chain 5/L%2C N-terminal~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase I chain L%3B~IMG reference gene:2504784019~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%3B NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0639 Thena_0640 Thena_0640 Thena_0640 617273 617692 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2~InterPro IPR001450~KEGG: sew:SeSA_A4531 cytochrome c nitrite reductase%2C Fe-S protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504784020~PFAM: 4Fe-4S binding domain gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0640 Thena_0641 Thena_0641 Thena_0641 617702 618799 - NADH dehydrogenase (quinone) COGs: COG3261 Ni Fe-hydrogenase III large subunit~Contains Selenocysteine~InterPro IPR001135~KEGG: emi:Emin_1130 NADH-ubiquinone oxidoreductase chain 49kDa~PFAM: NADH-quinone oxidoreductase%2C subunit D~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-ubiquinone oxidoreductase chain 49kDa%3B~manually curated~IMG reference gene:2504784021~PFAM: Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit%3B Nickel-dependent hydrogenase gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0641 Thena_0642 Thena_0642 Thena_0642 618792 619259 - NADH dehydrogenase (ubiquinone) 30 kDa subunit InterPro IPR001268~PFAM: NADH:ubiquinone oxidoreductase%2C 30kDa subunit~IMG reference gene:2504784022~PFAM: Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0642 Thena_0643 Thena_0643 Thena_0643 619773 621008 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: sus:Acid_4563 major facilitator transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504784023~PFAM: Sugar (and other) transporter%3B Major Facilitator Superfamily gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0643 Thena_0644 Thena_0644 Thena_0644 621274 622398 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: rba:RB9648 ceramide glucosyltransferase~PFAM: Glycosyl transferase%2C family 2~SPTR: Probable ceramide glucosyltransferase%3B~IMG reference gene:2504784024~PFAM: Glycosyl transferase family 2 gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0644 Thena_0645 Thena_0645 Thena_0645 622459 623397 + Bile acid:sodium symporter COGs: COG0385 Na+-dependent transporter~InterPro IPR002657~KEGG: mta:Moth_0574 bile acid:sodium symporter~PFAM: Bile acid:sodium symporter~SPTR: Bile acid:sodium symporter%3B~IMG reference gene:2504784025~PFAM: Sodium Bile acid symporter family~TIGRFAM: bile acid transporter gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0645 Thena_0646 Thena_0646 Thena_0646 623430 624434 + aspartate-semialdehyde dehydrogenase COGs: COG0136 Aspartate-semialdehyde dehydrogenase~InterPro IPR000534:IPR012280:IPR005986~KEGG: aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase%2C dimerisation region%3B Semialdehyde dehydrogenase%2C NAD-binding~PRIAM: Aspartate-semialdehyde dehydrogenase~SPTR: Aspartate-semialdehyde dehydrogenase%3B~TIGRFAM: Aspartate-semialdehyde dehydrogenase%2C bacterial~IMG reference gene:2504784026~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0646 Thena_0647 Thena_0647 Thena_0647 624463 625353 + Dihydrodipicolinate synthase COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase~HAMAP: Dihydrodipicolinate synthase~InterPro IPR002220:IPR005263~KEGG: chy:CHY_1156 dihydrodipicolinate synthase~PFAM: Dihydrodipicolinate synthetase~SPTR: Dihydrodipicolinate synthase%3B~TIGRFAM: Dihydrodipicolinate synthase subfamily~IMG reference gene:2504784027~PFAM: Dihydrodipicolinate synthetase family~TIGRFAM: dihydrodipicolinate synthase gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0647 Thena_0648 Thena_0648 Thena_0648 625354 625899 + protein of unknown function DUF208 COGs: COG1636 conserved hypothetical protein~InterPro IPR003828~KEGG: adg:Adeg_1629 protein of unknown function DUF208~PFAM: Protein of unknown function DUF208~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784028~PFAM: Uncharacterized BCR%2C COG1636 gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0648 Thena_0649 Thena_0649 Thena_0649 625896 626120 + hypothetical protein KEGG: tro:trd_0445 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784029~PFAM: Protein of unknown function (DUF2905) gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0649 Thena_0650 Thena_0650 Thena_0650 626237 626467 + pseudogene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0650 Thena_0651 Thena_0651 Thena_0651 626457 627464 + S-adenosylmethionine:tRNAribosyltransferase-isomerase COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)~HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase~InterPro IPR003699~KEGG: cow:Calow_0182 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase~PFAM: Queuosine biosynthesis protein~SPTR:S-adenosylmethionine/tRNA-ribosyltransferase-i somerase%3B~TIGRFAM: Queuosine biosynthesis protein~IMG reference gene:2504784031~PFAM: Queuosine biosynthesis protein~TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0651 Thena_0652 Thena_0652 Thena_0652 627524 627994 - heat shock protein Hsp20 COGs: COG0071 Molecular chaperone (small heat shock protein)~InterPro IPR002068~KEGG: aca:ACP_2406 heat shock protein%2C HSP20 family~PFAM: Heat shock protein Hsp20~SPTR: Heat shock protein Hsp20%3B~IMG reference gene:2504784032~PFAM: Hsp20/alpha crystallin family gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0652 Thena_0653 Thena_0653 Thena_0653 628199 629243 + pseudogene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0653 Thena_0654 Thena_0654 Thena_0654 629636 631198 + S-layer domain-containing protein InterPro IPR001119~KEGG: vpr:Vpar_0227 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein domain protein%3B~IMG reference gene:2504784035~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0654 Thena_0655 Thena_0655 Thena_0655 631224 631973 - Prolipoprotein diacylglyceryl transferase COGs: COG0682 Prolipoprotein diacylglyceryltransferase~HAMAP: Prolipoprotein diacylglyceryl transferase~InterPro IPR001640~KEGG: dtu:Dtur_0951 prolipoprotein diacylglyceryl transferase~PFAM: Prolipoprotein diacylglyceryl transferase~SPTR: Prolipoprotein diacylglyceryl transferase%3B~TIGRFAM: Prolipoprotein diacylglyceryl transferase~IMG reference gene:2504784036~PFAM: Prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0655 Thena_0656 Thena_0656 Thena_0656 632164 632580 + Protein mraZ COGs: COG2001 conserved hypothetical protein~HAMAP: MraZ~InterPro IPR020603:IPR003444~KEGG: csc:Csac_0916 cell division protein MraZ~PFAM: MraZ domain~SPTR: Protein MraZ%3B~TIGRFAM: MraZ~IMG reference gene:2504784037~PFAM: MraZ protein~TIGRFAM: mraZ protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0656 Thena_0657 Thena_0657 Thena_0657 632573 633469 + Ribosomal RNA small subunit methyltransferase H COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis~HAMAP: S-adenosyl-L-methionine-dependent methyltransferase%2C MraW~InterPro IPR002903~KEGG: tye:THEYE_A1331 S-adenosyl-methyltransferase MraW~PFAM: S-adenosyl-L-methionine-dependent methyltransferase%2C MraW~SPTR: Ribosomal RNA small subunit methyltransferase H%3B~TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase%2C MraW~IMG reference gene:2504784038~PFAM: MraW methylase family~TIGRFAM: S-adenosyl-methyltransferase MraW gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0657 Thena_0658 Thena_0658 Thena_0658 633466 633816 + hypothetical protein IMG reference gene:2504784039 gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0658 Thena_0659 Thena_0659 Thena_0659 633870 635489 + Peptidoglycan glycosyltransferase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005311:IPR001460~KEGG: lip:LI1098 cell division protein FtsI/penicillin-binding protein 2~PFAM: Penicillin-binding protein%2C transpeptidase%3B Penicillin-binding protein%2C dimerisation domain~PRIAM: Peptidoglycan glycosyltransferase~SPTR: Peptidoglycan glycosyltransferase%3B~IMG reference gene:2504784040~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0659 Thena_0660 Thena_0660 Thena_0660 635545 637008 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6-di aminopimelateligase~InterPro IPR000713:IPR013221:IPR004101:IPR005761~KEGG: toc:Toce_0947 UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6- diaminopimelate ligase~PFAM: Mur ligase%2C central%3B Mur ligase%2C N-terminal%3B Mur ligase%2C C-terminal~PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C 6-diaminopimelateligase~SPTR: UDP-MurNac-tripeptide synthetase%3B~TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6- diaminopimelateligase~IMG reference gene:2504784041~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0660 Thena_0661 Thena_0661 Thena_0661 637037 638470 + UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diamin opimelate/D-alanyl-D-alanyl ligase COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase~InterPro IPR000713:IPR013221:IPR004101:IPR005863~KEGG: aar:Acear_0742 UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diamin opimelate/D-alanyl-D-alanylligase~PFAM: Mur ligase%2C central%3B Mur ligase%2C N-terminal%3B Mur ligase%2C C-terminal~PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase~SPTR:UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diam inopimelate/D-alanyl-D-alanylligase%3B~TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase~IMG reference gene:2504784042~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0661 Thena_0662 Thena_0662 Thena_0662 638512 639453 + Phospho-N-acetylmuramoyl-pentapeptide-transferase COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase~InterPro IPR018481:IPR003524~KEGG: dae:Dtox_1052 phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: Glycosyl transferase%2C family 4%2C conserved region~SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase%3B~TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase~IMG reference gene:2504784043~PFAM: Glycosyl transferase family 4~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0662 Thena_0663 Thena_0663 Thena_0663 639444 640838 + UDP-N-acetylmuramoylalanine--D-glutamate ligase COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase~HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase~InterPro IPR013221:IPR004101:IPR005762~KEGG: tit:Thit_1484 UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase%2C central%3B Mur ligase%2C C-terminal~PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase~SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B~TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase~IMG reference gene:2504784044~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0663 Thena_0664 Thena_0664 Thena_0664 640835 641938 + cell cycle protein COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182~KEGG: cbs:COXBURSA331_A0222 cell division protein FtsW~PFAM: Cell cycle protein~SPTR: Stage V sporulation protein E%3B~IMG reference gene:2504784045~PFAM: Cell cycle protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0664 Thena_0665 Thena_0665 Thena_0665 641935 643017 + UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~HAMAP:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~InterPro IPR004276:IPR007235~KEGG: ttr:Tter_1347 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: Glycosyl transferase%2C family 28%2C C-terminal%3B Glycosyl transferase%2C family 28~SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B~IMG reference gene:2504784046~PFAM: Glycosyltransferase family 28 N-terminal domain%3B Glycosyltransferase family 28 C-terminal domain~TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0665 Thena_0666 Thena_0666 Thena_0666 643017 644453 + UDP-N-acetylmuramate--L-alanine ligase COGs: COG0773 UDP-N-acetylmuramate-alanine ligase~HAMAP: UDP-N-acetylmuramate-alanine ligase~InterPro IPR000713:IPR013221:IPR004101:IPR005758~KEGG: aae:aq_1360 UDP-N-acetylmuramate-alanine ligase~PFAM: Mur ligase%2C central%3B Mur ligase%2C N-terminal%3B Mur ligase%2C C-terminal~PRIAM: UDP-N-acetylmuramate--L-alanine ligase~SPTR: UDP-N-acetylmuramate--L-alanine ligase%3B~TIGRFAM: UDP-N-acetylmuramate-alanine ligase~IMG reference gene:2504784047~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramate--alanine ligase gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0666 Thena_0667 Thena_0667 Thena_0667 644422 645309 + UDP-N-acetylenolpyruvoylglucosamine reductase COGs: COG0812 UDP-N-acetylmuramate dehydrogenase~HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase~InterPro IPR011601:IPR003170~KEGG: ate:Athe_0319 UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal~SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase%3B~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~IMG reference gene:2504784048~PFAM: FAD binding domain%3B UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal domain~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0667 Thena_0668 Thena_0668 Thena_0668 645306 646232 + D-alanine--D-alanine ligase COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein~HAMAP: D-alanine--D-alanine ligase~InterPro IPR011127:IPR011095:IPR005905~KEGG: swo:Swol_1155 D-alanine--D-alanine ligase~PFAM: D-alanine--D-alanine ligase%2C C-terminal%3B D-alanine--D-alanine ligase%2C N-terminal~PRIAM: D-alanine--D-alanine ligase~SPTR: D-alanine--D-alanine ligase%3B~TIGRFAM: D-alanine--D-alanine ligase~IMG reference gene:2504784049~PFAM: D-ala D-ala ligase C-terminus%3B D-ala D-ala ligase N-terminus~TIGRFAM: D-alanine--D-alanine ligase gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0668 Thena_0669 Thena_0669 Thena_0669 646207 646878 + hypothetical protein IMG reference gene:2504784050 gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0669 Thena_0670 Thena_0670 Thena_0670 646875 647639 + protein of unknown function DUF881 COGs: COG3879 conserved hypothetical protein~InterPro IPR010273~KEGG: toc:Toce_0956 protein of unknown function DUF881~PFAM: Protein of unknown function DUF881%2C bacterial~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784051~PFAM: Bacterial protein of unknown function (DUF881) gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0670 Thena_0671 Thena_0671 Thena_0671 647643 647990 + protein of unknown function DUF1290 COGs: COG3856 conserved hypothetical protein (small basic protein)~InterPro IPR009709~KEGG: mta:Moth_0848 hypothetical protein~PFAM: Protein of unknown function DUF1290~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784052~PFAM: Protein of unknown function (DUF1290) gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0671 Thena_0672 Thena_0672 Thena_0672 647983 649134 + cell division protein FtsA COGs: COG0849 Actin-like ATPase involved in cell division~InterPro IPR003494:IPR020823~KEGG: aae:aq_523 cell division protein FtsA~PFAM: Cell division protein FtsA domain~SPTR: Cell division protein FtsA%3B~TIGRFAM: Cell division protein family FtsA~IMG reference gene:2504784053~PFAM: Cell division protein FtsA~TIGRFAM: cell division protein FtsA gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0672 Thena_0673 Thena_0673 Thena_0673 649150 650235 + cell division protein FtsZ COGs: COG0206 Cell division GTPase~InterPro IPR003008:IPR018316:IPR000158~KEGG: nth:Nther_1308 cell division protein FtsZ~PFAM: Tubulin/FtsZ%2C GTPase domain%3B Tubulin/FtsZ%2C 2-layer sandwich domain~SPTR: Cell division protein FtsZ%3B~TIGRFAM: Cell division protein FtsZ%2C N-terminal~IMG reference gene:2504784054~PFAM: Tubulin/FtsZ family%2C GTPase domain%3B FtsZ family%2C C-terminal domain~TIGRFAM: cell division protein FtsZ gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0673 Thena_0674 Thena_0674 Thena_0674 650277 651266 + hypothetical protein IMG reference gene:2504784055 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0674 Thena_0675 Thena_0675 Thena_0675 651284 652468 + cell envelope-related transcriptional attenuator COGs: COG1316 Transcriptional regulator~InterPro IPR004474~KEGG: aco:Amico_0841 cell envelope-related transcriptional attenuator~PFAM: Cell envelope-related transcriptional attenuator~SPTR: Cell envelope-related transcriptional attenuator%3B~TIGRFAM: Cell envelope-related transcriptional attenuator~IMG reference gene:2504784056~PFAM: Cell envelope-related transcriptional attenuator domain~TIGRFAM: cell envelope-related function transcriptional attenuator common domain gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0675 Thena_0676 Thena_0676 Thena_0676 652525 653610 - Peptide chain release factor 1 COGs: COG0216 Protein chain release factor A~HAMAP: Peptide chain release factor 1~InterPro IPR005139:IPR000352:IPR004373~KEGG: peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B Peptide chain release factor~SPTR: Peptide chain release factor 1%3B~TIGRFAM: Peptide chain release factor 1~IMG reference gene:2504784057~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 1 gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0676 Thena_0677 Thena_0677 Thena_0677 653692 654018 + hypothetical protein KEGG: hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784058~PFAM: Protein of unknown function (DUF1292) gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0677 Thena_0678 Thena_0678 Thena_0678 654042 655031 + aminodeoxychorismate lyase COGs: COG1559 periplasmic solute-binding protein~InterPro IPR003770~KEGG: toc:Toce_1340 aminodeoxychorismate lyase~PFAM: Uncharacterised protein family YceG-like~SPTR: Aminodeoxychorismate lyase%3B~TIGRFAM: Uncharacterised protein family YceG-like~IMG reference gene:2504784059~PFAM: YceG-like family~TIGRFAM: conserved hypothetical protein%2C YceG family gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0678 Thena_0679 Thena_0679 Thena_0679 655037 655576 + Sporulation domain-containing protein InterPro IPR007730~PFAM: Sporulation/cell division region%2C bacteria~IMG reference gene:2504784060~PFAM: Sporulation related domain gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0679 Thena_0680 Thena_0680 Thena_0680 655589 656602 + cell shape determining protein%2C MreB/Mrl family COGs: COG1077 Actin-like ATPase involved in cell morphogenesis~InterPro IPR004753~KEGG: rod shape-determining protein MreB~PFAM: Cell shape determining protein MreB/Mrl~SPTR: Rod shape-determining protein MreB%3B~TIGRFAM: Cell shape determining protein MreB/Mrl~IMG reference gene:2504784061~PFAM: MreB/Mbl protein~TIGRFAM: cell shape determining protein%2C MreB/Mrl family gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0680 Thena_0681 Thena_0681 Thena_0681 656586 657386 + Rod shape-determining protein MreC COGs: COG1792 Cell shape-determining protein~InterPro IPR007221~KEGG: pmx:PERMA_0056 rod shape-determining protein MreC~PFAM: Rod shape-determining protein MreC~SPTR: Rod shape-determining protein MreC%3B~IMG reference gene:2504784062~PFAM: rod shape-determining protein MreC gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0681 Thena_0682 Thena_0682 Thena_0682 657365 657859 + hypothetical protein IMG reference gene:2504784063 gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0682 Thena_0683 Thena_0683 Thena_0683 657849 659552 + penicillin-binding protein 2 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005311:IPR001460:IPR017790~KEGG: dtu:Dtur_1401 penicillin-binding protein 2~PFAM: Penicillin-binding protein%2C transpeptidase%3B Penicillin-binding protein%2C dimerisation domain~PRIAM: Peptidoglycan glycosyltransferase~SPTR: Penicillin-binding protein 2%3B~TIGRFAM: Penicillin-binding protein 2~IMG reference gene:2504784064~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain~TIGRFAM: penicillin-binding protein 2 gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0683 Thena_0684 Thena_0684 Thena_0684 659555 660232 + septum site-determining protein minC COGs: COG0850 Septum formation inhibitor~HAMAP: Septum formation inhibitor MinC~InterPro IPR005526:IPR013033~KEGG: aoe:Clos_1761 septum site-determining protein MinC~PFAM: Septum formation inhibitor MinC%2C C-terminal~SPTR: Probable septum site-determining protein minC%3B~TIGRFAM: Septum formation inhibitor MinC~IMG reference gene:2504784065~PFAM: Septum formation inhibitor MinC%2C C-terminal domain~TIGRFAM: septum site-determining protein MinC gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0684 Thena_0685 Thena_0685 Thena_0685 660237 661046 + septum site-determining protein MinD COGs: COG2894 Septum formation inhibitor-activating ATPase~InterPro IPR002586:IPR010223~KEGG: ctc:CTC02069 septum site-determining protein MinD~PFAM: Cobyrinic acid a%2Cc-diamide synthase~SPTR: Septum site-determining protein MinD%3B~TIGRFAM: Septum site-determining protein MinD~IMG reference gene:2504784066~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: septum site-determining protein MinD gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0685 Thena_0686 Thena_0686 Thena_0686 661048 661302 + Cell division topological specificity factor COGs: COG0851 Septum formation topological specificity factor~HAMAP: Septum formation topological specificity factor MinE~InterPro IPR005527~KEGG: chy:CHY_0349 cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~SPTR: Cell division topological specificity factor%3B~TIGRFAM: Septum formation topological specificity factor MinE~IMG reference gene:2504784067~PFAM: Septum formation topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0686 Thena_0687 Thena_0687 Thena_0687 661305 662543 + cell cycle protein COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182~KEGG: dap:Dacet_1268 rod shape-determining protein RodA~PFAM: Cell cycle protein~SPTR: Rod shape-determining protein RodA%3B~IMG reference gene:2504784068~PFAM: Cell cycle protein~TIGRFAM: rod shape-determining protein RodA gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0687 Thena_0688 Thena_0688 Thena_0688 662540 663433 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: tsi:TSIB_1760 permease%2C drug/metabolite transporter (DMT) superfamily~PFAM: Protein of unknown function DUF6%2C transmembrane~SPTR: Permease%2C drug/metabolite transporter (DMT) superfamily%3B~IMG reference gene:2504784069~PFAM: EamA-like transporter family gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0688 Thena_0689 Thena_0689 Thena_0689 663420 665399 + helicase c2 COGs: COG1199 Rad3-related DNA helicase~InterPro IPR006555~KEGG: nth:Nther_1106 helicase C2~SMART: Helicase%2C ATP-dependent%2C c2 type~SPTR: Helicase c2%3B~IMG reference gene:2504784070 gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0689 Thena_0690 Thena_0690 Thena_0690 665401 665907 + AMMECR1 domain protein COGs: COG2078 conserved hypothetical protein~InterPro IPR002733~KEGG: pmo:Pmob_1459 AMMECR1 domain-containing protein~PFAM: AMMECR1~SPTR: AMMECR1 domain protein%3B~IMG reference gene:2504784071~PFAM: AMMECR1~TIGRFAM: uncharacterized protein%2C PH0010 family gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0690 Thena_0691 Thena_0691 Thena_0691 665929 666408 + hypothetical protein IMG reference gene:2504784072~PFAM: NTF2-like N-terminal transpeptidase domain gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0691 Thena_0692 Thena_0692 Thena_0692 666451 667473 + Phenylalanyl-tRNA synthetase alpha chain COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit~HAMAP: Phenylalanyl-tRNA synthetase alpha chain~InterPro IPR004188:IPR002319:IPR004529~KEGG: toc:Toce_1397 phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: Phenylalanyl-tRNA synthetase alpha chain%3B Phenylalanyl-tRNA synthetase%2C class II%2C N-terminal~SPTR: Phenylalanyl-tRNA synthetase alpha chain%3B~TIGRFAM: Phenylalanyl-tRNA synthetase%2C class IIc%2C alpha subunit~IMG reference gene:2504784073~PFAM: tRNA synthetases class II core domain (F)%3B Aminoacyl tRNA synthetase class II%2C N-terminal domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0692 Thena_0693 Thena_0693 Thena_0693 667544 669967 + Phenylalanyl-tRNA synthetase beta chain COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit~HAMAP: Phenylalanyl-tRNA synthetase%2C class IIc%2C beta subunit%2C bacterial~InterProIPR002547:IPR005146:IPR005147:IPR005121:IPR 004532~KEGG: dtu:Dtur_1309 phenylalanyl-tRNA synthetase%2C beta subunit~PFAM: B3/B4 tRNA-binding domain%3B tRNA-binding region%3B tRNA synthetase%2C B5%3B Phenylalanyl-tRNA synthetase%2C beta subunit%2C ferrodoxin-fold anticodon-binding~SPTR: Phenylalanyl-tRNA synthetase%2C beta subunit%3B~TIGRFAM: Phenylalanyl-tRNA synthetase%2C class IIc%2C beta subunit%2C bacterial~IMG reference gene:2504784074~PFAM: tRNA synthetase B5 domain%3B B3/4 domain%3B Ferredoxin-fold anticodon binding domain%3B Putative tRNA binding domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit%2C non-spirochete bacterial gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0693 Thena_0694 Thena_0694 Thena_0694 670014 670508 + Colicin V production protein InterPro IPR003825~PFAM: Colicin V production protein~IMG reference gene:2504784075 gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0694 Thena_0695 Thena_0695 Thena_0695 670496 672217 + PHP domain protein COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family~InterPro IPR004013:IPR003141~KEGG: hor:Hore_05670 DNA polymerase X family protein~PFAM: PHP%2C C-terminal~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: DNA polymerase X family protein%3B~IMG reference gene:2504784076~PFAM: PHP domain gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0695 Thena_0696 Thena_0696 Thena_0696 672272 672727 + hypothetical protein IMG reference gene:2504784077 gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0696 Thena_0697 Thena_0697 Thena_0697 672729 676145 + DNA polymerase III%2C alpha subunit COGs: COG0587 DNA polymerase III alpha subunit~InterProIPR004013:IPR011708:IPR004365:IPR003141:IPR 004805~KEGG: dth:DICTH_1283 DNA polymerase III alpha subunit~PFAM: Bacterial DNA polymerase III%2C alpha subunit%3B PHP%2C C-terminal%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~PRIAM: DNA-directed DNA polymerase~SMART: Polymerase/histidinol phosphatase%2C N-terminal~SPTR: DNA polymerase III alpha subunit%3B~TIGRFAM: DNA polymerase III%2C alpha subunit~IMG reference gene:2504784078~PFAM: Bacterial DNA polymerase III alpha subunit%3B PHP domain%3B OB-fold nucleic acid binding domain~TIGRFAM: DNA-directed DNA polymerase III (polc) gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0697 Thena_0698 Thena_0698 Thena_0698 676225 677445 + Histidine--tRNA ligase COGs: COG0124 Histidyl-tRNA synthetase~InterPro IPR002314~KEGG: dsy:DSY3916 hypothetical protein~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved region~PRIAM: Histidine--tRNA ligase~SPTR: Histidine--tRNA ligase%3B~IMG reference gene:2504784079~PFAM: tRNA synthetase class II core domain (G%2C H%2C P%2C S and T) gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0698 Thena_0699 Thena_0699 Thena_0699 677445 678080 + ATP phosphoribosyltransferase COGs: COG0040 ATP phosphoribosyltransferase~HAMAP: ATP phosphoribosyltransferase~InterPro IPR013820~KEGG: bpf:BpOF4_05385 ATP phosphoribosyltransferase catalytic subunit~PFAM: ATP phosphoribosyltransferase%2C catalytic region~PRIAM: ATP phosphoribosyltransferase~SPTR: ATP phosphoribosyltransferase catalytic subunit%3B~TIGRFAM: ATP phosphoribosyltransferase%2C catalytic region~IMG reference gene:2504784080~PFAM: ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0699 Thena_0700 Thena_0700 Thena_0700 678067 679353 + Histidinol dehydrogenase COGs: COG0141 Histidinol dehydrogenase~HAMAP: Histidinol dehydrogenase%2C prokaryotic-type~InterPro IPR012131~KEGG: tye:THEYE_A1817 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase%2C prokaryotic-type~PRIAM: Histidinol dehydrogenase~SPTR: Histidinol dehydrogenase%3B~TIGRFAM: Histidinol dehydrogenase%2C prokaryotic-type~IMG reference gene:2504784081~PFAM: Histidinol dehydrogenase~TIGRFAM: histidinol dehydrogenase gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0700 Thena_0701 Thena_0701 Thena_0701 679391 679921 + nucleoside diphosphate pyrophosphatase InterPro IPR000086:IPR004385~KEGG: amt:Amet_2521 NUDIX hydrolase~PFAM: NUDIX hydrolase domain~SPTR: NUDIX hydrolase%3B~TIGRFAM: Nucleoside diphosphate pyrophosphatase~IMG reference gene:2504784082~PFAM: NUDIX domain~TIGRFAM: nudix-type nucleoside diphosphatase%2C YffH/AdpP family gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0701 Thena_0702 Thena_0702 Thena_0702 679893 680813 + Tyrosine recombinase xerC COGs: COG4974 Site-specific recombinase XerD~HAMAP: Tyrosine recombinase xerC~InterPro IPR004107:IPR002104~KEGG: dtu:Dtur_1473 tyrosine recombinase XerD~PFAM: Integrase%2C catalytic core%2C phage%3B Integrase%2C N-terminal SAM-like%2C phage~SPTR: Tyrosine recombinase XerD%3B~IMG reference gene:2504784083~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0702 Thena_0703 Thena_0703 Thena_0703 680862 682493 + delta-1-pyrroline-5-carboxylate dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590:IPR005931~KEGG: ddf:DEFDS_1067 1-pyrroline-5-carboxylate dehydrogenase~PFAM: Aldehyde dehydrogenase~PRIAM: 1-pyrroline-5-carboxylate dehydrogenase~SPTR: 1-pyrroline-5-carboxylate dehydrogenase%3B~TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1~IMG reference gene:2504784084~PFAM: Aldehyde dehydrogenase family~TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase%2C group 1 gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0703 Thena_0704 Thena_0704 Thena_0704 682493 683392 + Proline dehydrogenase COGs: COG0506 Proline dehydrogenase~InterPro IPR002872~KEGG: ddf:DEFDS_1068 proline dehydrogenase~PFAM: Proline dehydrogenase~PRIAM: Proline dehydrogenase~SPTR: Proline dehydrogenase%3B~IMG reference gene:2504784085~PFAM: Proline dehydrogenase gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0704 Thena_0705 Thena_0705 Thena_0705 683485 684618 + Extracellular ligand-binding receptor COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component~InterPro IPR001828~KEGG: mno:Mnod_1741 extracellular ligand-binding receptor~PFAM: Extracellular ligand-binding receptor~SPTR: Extracellular ligand-binding receptor%3B~IMG reference gene:2504784086~PFAM: Receptor family ligand binding region gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0705 Thena_0706 Thena_0706 Thena_0706 684861 685049 + hypothetical protein IMG reference gene:2504784089 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0706 Thena_0707 Thena_0707 Thena_0707 685053 685454 + pseudogene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0707 Thena_0708 Thena_0708 Thena_0708 685603 686439 + beta-lactamase domain protein COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II~KEGG: adg:Adeg_1793 beta-lactamase domain protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504784091~PFAM: Metallo-beta-lactamase superfamily gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0708 Thena_0709 Thena_0709 Thena_0709 686498 687790 + major facilitator superfamily MFS_1 COGs: COG2271 Sugar phosphate permease~InterPro IPR011701~KEGG: bgf:BC1003_3946 major facilitator superfamily protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504784092~PFAM: Major Facilitator Superfamily gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0709 Thena_0710 Thena_0710 Thena_0710 687857 688762 + Chromate transporter COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370~KEGG: mja:MJ_0718 chromate resistance protein ChrA~PFAM: Chromate transporter region~SPTR: Putative uncharacterized transporter MJ0718%3B~IMG reference gene:2504784093~PFAM: Chromate transporter~TIGRFAM: chromate transporter%2C chromate ion transporter (CHR) family gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0710 Thena_0711 Thena_0711 Thena_0711 688726 689031 + hypothetical protein IMG reference gene:2504784094~PFAM: Chromate transporter gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0711 Thena_0712 Thena_0712 Thena_0712 689342 690412 + RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)~InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284:IPR012760~KEGG: sth:STH588 RNA polymerase sigma factor RpoD~PFAM: RNA polymerase sigma-70 region 3%3B RNA polymerase sigma-70 region 2%3B RNA polymerase sigma-70 region 1.2%3B RNA polymerase sigma-70 region 4~SPTR: RNA polymerase%2C sigma 70 subunit%2C RpoD%3B~TIGRFAM: RNA polymerase sigma factor RpoD%2C C-terminal%3B RNA polymerase sigma-70~IMG reference gene:2504784097~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2%3B Sigma-70 factor%2C region 1.2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma factor RpoD%2C C-terminal domain gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0712 Thena_0713 Thena_0713 Thena_0713 690415 691098 + Undecaprenyl pyrophosphate synthase COGs: COG0020 Undecaprenyl pyrophosphate synthase~HAMAP: Undecaprenyl pyrophosphate synthase~InterPro IPR001441~KEGG: nmn:NMCC_1966 undecaprenyl diphosphate synthase~PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e~PRIAM: Di-trans%2Cpoly-cis-decaprenylcistransferase~SPTR: Di-trans%2Cpoly-cis-decaprenylcistransferase%3B~TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like~manually curated~IMG reference gene:2504784098~PFAM: Putative undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0713 Thena_0714 Thena_0714 Thena_0714 691095 691868 + phosphatidate cytidylyltransferase COGs: COG0575 CDP-diglyceride synthetase~InterPro IPR000374~KEGG: dtu:Dtur_1198 phosphatidate cytidylyltransferase~PFAM: Phosphatidate cytidylyltransferase~SPTR: Phosphatidate cytidylyltransferase%3B~IMG reference gene:2504784099~PFAM: Cytidylyltransferase family gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0714 Thena_0715 Thena_0715 Thena_0715 691865 692995 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase~HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~InterPro IPR013512:IPR013644:IPR003821~KEGG: tmt:Tmath_1247 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C C-terminal%3B 1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C N-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase~SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%3B~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~IMG reference gene:2504784100~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase%3B 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0715 Thena_0716 Thena_0716 Thena_0716 692995 694017 + membrane-associated zinc metalloprotease COGs: COG0750 membrane-associated Zn-dependent protease 1~InterPro IPR008915:IPR001478:IPR004387~KEGG: tmt:Tmath_1246 membrane-associated zinc metalloprotease~PFAM: Peptidase M50%3B PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF~SPTR: Membrane-associated zinc metalloprotease%3B~TIGRFAM: Peptidase M50%2C putative membrane-associated zinc metallopeptidase~IMG reference gene:2504784101~PFAM: Peptidase family M50%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: RIP metalloprotease RseP gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0716 Thena_0717 Thena_0717 Thena_0717 694014 695066 + 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis~HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type~InterPro IPR004588~KEGG: clj:CLJU_c13100 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type~SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%3B~TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase%2C bacterial-type~IMG reference gene:2504784102~PFAM: GcpE protein~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0717 Thena_0718 Thena_0718 Thena_0718 695063 696781 + Prolyl-tRNA synthetase COGs: COG0442 Prolyl-tRNA synthetase~HAMAP: Prolyl-tRNA synthetase~InterPro IPR002314:IPR007214:IPR004154:IPR004500~KEGG: prolyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved region%3B YbaK/aminoacyl-tRNA synthetase associated region%3B Anticodon-binding~SPTR: Prolyl-tRNA synthetase%3B~TIGRFAM: Prolyl-tRNA synthetase%2C class IIa%2C bacterial~IMG reference gene:2504784103~PFAM: YbaK / prolyl-tRNA synthetases associated domain%3B Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: prolyl-tRNA synthetase%2C family II gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0718 Thena_0719 Thena_0719 Thena_0719 696783 698885 + penicillin-binding protein%2C 1A family COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein)~InterPro IPR001264:IPR001460:IPR011816~KEGG: dtu:Dtur_1128 penicillin-binding protein%2C 1A family~PFAM: Glycosyl transferase%2C family 51%3B Penicillin-binding protein%2C transpeptidase~SPTR: Penicillin-binding protein%2C 1A family%3B~TIGRFAM: Penicillin-binding protein 1A~IMG reference gene:2504784104~PFAM: Penicillin binding protein transpeptidase domain%3B Transglycosylase~TIGRFAM: penicillin-binding protein 1B%3B penicillin-binding protein 1C%3B penicillin-binding protein%2C 1A family gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0719 Thena_0720 Thena_0720 Thena_0720 698863 699540 - hydrogenase accessory protein HypB COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase~InterPro IPR003495:IPR004392~KEGG: tjr:TherJR_2986 hydrogenase accessory protein HypB~PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like~SPTR: Hydrogenase accessory protein HypB%3B~TIGRFAM: Hydrogenase accessory protein HypB~IMG reference gene:2504784105~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain~TIGRFAM: hydrogenase accessory protein HypB gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0720 Thena_0721 Thena_0721 Thena_0721 699582 699926 - hydrogenase nickel insertion protein HypA COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)~InterPro IPR000688~KEGG: aae:aq_1021 hydrogenase accessory protein HypA~PFAM: Hydrogenase nickel incorporation protein HypA/HybF~SPTR: Probable hydrogenase nickel incorporation protein hypA%3B~TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF~IMG reference gene:2504784106~PFAM: Hydrogenase expression/synthesis hypA family~TIGRFAM: hydrogenase nickel insertion protein HypA gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0721 Thena_0722 Thena_0722 Thena_0722 699927 701024 - peptidase M48 Ste24p COGs: COG4783 Putative Zn-dependent protease contains TPR repeats~InterPro IPR001915~KEGG: tai:Taci_0829 peptidase M48 Ste24p~PFAM: Peptidase M48%2C Ste24p~SPTR: Peptidase M48 Ste24p%3B~IMG reference gene:2504784107~PFAM: Peptidase family M48 gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0722 Thena_0723 Thena_0723 Thena_0723 701017 701850 - hypothetical protein IMG reference gene:2504784108 gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0723 Thena_0724 Thena_0724 Thena_0724 701847 703472 - Arginyl-tRNA synthetase COGs: COG0018 Arginyl-tRNA synthetase~HAMAP: Arginyl-tRNA synthetase%2C class Ic~InterPro IPR005148:IPR015945:IPR008909:IPR001278~KEGG: dtu:Dtur_1486 arginyl-tRNA synthetase~PFAM: Arginyl-tRNA synthetase%2C class Ic%2C core%3B Arginyl tRNA synthetase%2C class Ic%2C N-terminal%3B DALR anticodon binding~PRIAM: Arginine--tRNA ligase~SPTR: Arginyl-tRNA synthetase%3B~TIGRFAM: Arginyl-tRNA synthetase%2C class Ic~IMG reference gene:2504784109~PFAM: DALR anticodon binding domain%3B Arginyl tRNA synthetase N terminal domain%3B tRNA synthetases class I (R)~TIGRFAM: arginyl-tRNA synthetase gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0724 Thena_0725 Thena_0725 Thena_0725 703584 704108 + Bifunctional protein pyrR COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase~HAMAP: Bifunctional protein pyrR~InterPro IPR000836~KEGG: aco:Amico_1602 uracil phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~PRIAM: Uracil phosphoribosyltransferase~SPTR: Bifunctional protein pyrR 2%3B~IMG reference gene:2504784110~PFAM: Phosphoribosyl transferase domain gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0725 Thena_0726 Thena_0726 Thena_0726 704105 705049 + Aspartate carbamoyltransferase COGs: COG0540 Aspartate carbamoyltransferase catalytic chain~HAMAP: Aspartate carbamoyltransferase~InterPro IPR006132:IPR006131:IPR002082~KEGG: sfu:Sfum_2090 aspartate carbamoyltransferase~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn-binding region~PRIAM: Aspartate carbamoyltransferase~SPTR: Aspartate carbamoyltransferase%3B~TIGRFAM: Aspartate carbamoyltransferase%2C eukaryotic~IMG reference gene:2504784111~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain~TIGRFAM: aspartate carbamoyltransferase gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0726 Thena_0727 Thena_0727 Thena_0727 705076 706383 + dihydroorotase%2C multifunctional complex type COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase~InterPro IPR006680:IPR004722~KEGG: chd:Calhy_1353 dihydroorotase%2C multifunctional complex type~PFAM: Amidohydrolase 1~SPTR: Dihydroorotase%2C multifunctional complex type%3B~TIGRFAM: Dihydroorotase multifunctional complex type~IMG reference gene:2504784112~PFAM: Amidohydrolase family~TIGRFAM: dihydroorotase%2C multifunctional complex type gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0727 Thena_0728 Thena_0728 Thena_0728 706439 707557 + carbamoyl-phosphate synthase%2C small subunit COGs: COG0505 Carbamoylphosphate synthase small subunit~InterPro IPR002474:IPR000991:IPR006274~KEGG: pca:Pcar_1613 carbamoyl phosphate synthase small subunit~PFAM: Carbamoyl phosphate synthase%2C small subunit%2C N-terminal%3B Glutamine amidotransferase class-I%2C C-terminal~PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing)~SPTR: Carbamoyl-phosphate synthase small chain%3B~TIGRFAM: Carbamoyl phosphate synthase%2C small subunit~IMG reference gene:2504784113~PFAM: Carbamoyl-phosphate synthase small chain%2C CPSase domain%3B Glutamine amidotransferase class-I~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0728 Thena_0729 Thena_0729 Thena_0729 707609 710839 + carbamoyl-phosphate synthase%2C large subunit COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ)~InterProIPR005481:IPR005479:IPR005480:IPR011607:IPR 006275~KEGG: apo:Arcpr_0660 carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Carbamoyl phosphate synthetase%2C large subunit%2C oligomerisation%3B MGS-like~PRIAM: Carbamoyl-phosphate synthase (ammonia)~SPTR: Carbamoyl-phosphate synthase%2C large subunit%3B~TIGRFAM: Carbamoyl phosphate synthase%2C large subunit%2C glutamine-dependent~IMG reference gene:2504784114~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B MGS-like domain%3B Carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain~TIGRFAM: carbamoyl-phosphate synthase%2C large subunit gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0729 Thena_0730 Thena_0730 Thena_0730 711012 712328 + tRNA(Ile)-lysidine synthase COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~HAMAP: tRNA(Ile)-lysidine synthase~InterPro IPR011063:IPR012795~KEGG: lba:Lebu_0736 tRNA(Ile)-lysidine synthetase~PFAM: PP-loop~SPTR: tRNA(Ile)-lysidine synthase%3B~TIGRFAM: Lysidine-tRNA(Ile) synthetase%2C N-terminal~IMG reference gene:2504784116~PFAM: PP-loop family~TIGRFAM: tRNA(Ile)-lysidine synthetase%2C N-terminal domain gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0730 Thena_0731 Thena_0731 Thena_0731 712309 712989 + protein of unknown function DUF554 COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump~InterPro IPR007563~KEGG: chy:CHY_2225 hypothetical protein~PFAM: Protein of unknown function DUF554~SPTR: Putative membrane protein%3B~IMG reference gene:2504784117~PFAM: Protein of unknown function (DUF554) gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0731 Thena_0732 Thena_0732 Thena_0732 712986 713516 + hypoxanthine phosphoribosyltransferase COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase~InterPro IPR000836:IPR005904~KEGG: cpe:CPE2471 hypoxanthine phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~PRIAM: Hypoxanthine phosphoribosyltransferase~SPTR: Hypoxanthine-guanine phosphoribosyltransferase%3B~TIGRFAM: Hypoxanthine phosphoribosyl transferase~IMG reference gene:2504784118~PFAM: Phosphoribosyl transferase domain~TIGRFAM: hypoxanthine phosphoribosyltransferase gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0732 Thena_0733 Thena_0733 Thena_0733 713581 715464 + ATP-dependent metalloprotease FtsH COGs: COG0465 ATP-dependent Zn protease~InterProIPR011546:IPR003959:IPR000642:IPR003593:IPR 005936~KEGG: dae:Dtox_0229 ATP-dependent metalloprotease FtsH~PFAM: Peptidase M41%3B ATPase%2C AAA-type%2C core%3B Peptidase M41%2C FtsH extracellular~PRIAM: Microtubule-severing ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATP-dependent metalloprotease FtsH%3B~TIGRFAM: Peptidase M41%2C FtsH~IMG reference gene:2504784119~PFAM: FtsH Extracellular%3B Peptidase family M41%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent metalloprotease FtsH gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0733 Thena_0734 Thena_0734 Thena_0734 715482 716306 + rare lipoprotein A COGs: COG0797 Lipoprotein~InterPro IPR005132:IPR012997~KEGG: gbe:GbCGDNIH1_1888 lipoprotein~PFAM: Rare lipoprotein A~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Rare lipoprotein A%2C bacterial~IMG reference gene:2504784120~PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel~TIGRFAM: rare lipoprotein A gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0734 Thena_0735 Thena_0735 Thena_0735 716342 717004 + serine O-acetyltransferase COGs: COG1045 Serine acetyltransferase~InterPro IPR001451:IPR005881~KEGG: serine O-acetyltransferase~PRIAM: Serine O-acetyltransferase~SPTR: Serine O-acetyltransferase%3B~TIGRFAM: Serine O-acetyltransferase~IMG reference gene:2504784121~TIGRFAM: serine O-acetyltransferase gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0735 Thena_0736 Thena_0736 Thena_0736 717007 718476 + cysteinyl-tRNA synthetase COGs: COG0215 Cysteinyl-tRNA synthetase~InterPro IPR015803:IPR015273:IPR002308~KEGG: cni:Calni_0407 cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase%2C class Ia%2C N-terminal%3B Cysteinyl-tRNA synthetase%2C class Ia%2C DALR~PRIAM: Cysteine--tRNA ligase~SPTR: Cysteinyl-tRNA synthetase%3B~TIGRFAM: Cysteinyl-tRNA synthetase%2C class Ia~IMG reference gene:2504784122~PFAM: tRNA synthetases class I (C) catalytic domain%3B DALR domain~TIGRFAM: cysteinyl-tRNA synthetase gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0736 Thena_0737 Thena_0737 Thena_0737 718473 719207 + RNA methyltransferase%2C TrmH family%2C group 3 COGs: COG0566 rRNA methylase~InterPro IPR013123:IPR001537:IPR004441~KEGG: bha:BH0113 tRNA/rRNA methyltransferase~PFAM: tRNA/rRNA methyltransferase%2C SpoU%3B RNA 2-O ribose methyltransferase%2C substrate binding~SPTR: tRNA/rRNA methyltransferase%3B~TIGRFAM: RNA methyltransferase TrmH%2C group 3~IMG reference gene:2504784123~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0737 Thena_0738 Thena_0738 Thena_0738 719248 719712 + Pyruvoyl-dependent arginine decarboxylase COGs: COG1945 conserved hypothetical protein~HAMAP: Pyruvoyl-dependent arginine decarboxylase~InterPro IPR002724~KEGG: mif:Metin_1355 arginine decarboxylase%2C pyruvoyl-dependent~PFAM: Pyruvoyl-dependent arginine decarboxylase~PRIAM: Arginine decarboxylase~SPTR: Pyruvoyl-dependent arginine decarboxylase%3B~TIGRFAM: Pyruvoyl-dependent arginine decarboxylase~IMG reference gene:2504784124~PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)~TIGRFAM: arginine decarboxylase%2C pyruvoyl-dependent gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0738 Thena_0739 Thena_0739 Thena_0739 719703 720560 + Spermidine synthase COGs: COG0421 Spermidine synthase~HAMAP: Spermidine synthase~InterPro IPR001045~KEGG: ttm:Tthe_1350 spermidine synthase~PFAM: Spermine synthase~SPTR: Spermidine synthase%3B~TIGRFAM: Spermine synthase~IMG reference gene:2504784125~PFAM: Spermine/spermidine synthase~TIGRFAM: spermidine synthase gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0739 Thena_0740 Thena_0740 Thena_0740 720557 720751 - RNA-binding protein InterPro IPR019300~KEGG: dol:Dole_0382 hypothetical protein~PFAM: RNA-binding protein%2C predicted~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784126~PFAM: Predicted RNA-binding protein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0740 Thena_0741 Thena_0741 Thena_0741 720754 721197 - hypothetical protein KEGG: tye:THEYE_A0085 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784127 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0741 Thena_0742 Thena_0742 Thena_0742 721280 722236 + PfkB domain protein COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR011611~KEGG: PfkB domain protein~PFAM: Carbohydrate/purine kinase~SPTR: PfkB domain protein%3B~IMG reference gene:2504784128~PFAM: pfkB family carbohydrate kinase gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0742 Thena_0743 Thena_0743 Thena_0743 722214 722654 - hypothetical protein KEGG: has:Halsa_1508 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784129 gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0743 Thena_0744 Thena_0744 Thena_0744 722774 723784 + phospho-2-dehydro-3-deoxyheptonate aldolase COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterPro IPR006218:IPR006268~KEGG: thx:Thet_1477 phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-7-phosphoheptulonate synthase~SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase%3B~TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase%2C subtype 2~IMG reference gene:2504784130~PFAM: DAHP synthetase I family~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0744 Thena_0745 Thena_0745 Thena_0745 723792 724637 + Prephenate dehydrogenase COGs: COG0287 Prephenate dehydrogenase~InterPro IPR003099~KEGG: tmt:Tmath_1029 prephenate dehydrogenase~PFAM: Prephenate dehydrogenase~PRIAM: Prephenate dehydrogenase~SPTR: Prephenate dehydrogenase%3B~IMG reference gene:2504784131~PFAM: Prephenate dehydrogenase gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0745 Thena_0746 Thena_0746 Thena_0746 724639 725919 + 3-phosphoshikimate 1-carboxyvinyltransferase COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase~HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase%2C subgroup~InterPro IPR001986:IPR006264~KEGG: tye:THEYE_A1767 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C core~PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase~SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase%3B~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase%2C subgroup~IMG reference gene:2504784132~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0746 Thena_0747 Thena_0747 Thena_0747 725931 727337 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR002646:IPR006674:IPR003607~KEGG: tte:TTE0109 tRNA nucleotidyltransferase/poly(A) polymerase~PFAM: Polynucleotide adenylyltransferase region%3B Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: tRNA nucleotidyltransferase/poly(A) polymerase%3B~IMG reference gene:2504784133~PFAM: HD domain%3B Poly A polymerase head domain~TIGRFAM: uncharacterized domain HDIG gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0747 Thena_0748 Thena_0748 Thena_0748 727447 727815 - helix-turn-helix domain protein InterPro IPR001387~KEGG: ccb:Clocel_0755 helix-turn-helix domain-containing protein~PFAM: Helix-turn-helix type 3~SMART: Helix-turn-helix type 3~SPTR: Helix-turn-helix domain protein%3B~IMG reference gene:2504784134~PFAM: Helix-turn-helix gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0748 Thena_0749 Thena_0749 Thena_0749 727835 729532 - CoA-disulfide reductase COGs: COG0446 NAD(FAD)-dependent dehydrogenase~InterPro IPR013027:IPR004099:IPR001763~KEGG: afu:AF0400 NADH oxidase (NoxA-3)~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation%3B Rhodanese-like~PRIAM: CoA-disulfide reductase~SMART: Rhodanese-like~SPTR: NADH oxidase (NoxA-3)%3B~IMG reference gene:2504784135~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B Rhodanese-like domain gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0749 Thena_0750 Thena_0750 Thena_0750 729665 731989 + Smr protein/MutS2 COGs: COG1193 Mismatch repair ATPase (MutS family)~InterPro IPR000432:IPR002625:IPR007696~KEGG: aae:aq_1242 DNA mismatch repair protein MutS~PFAM: Smr protein/MutS2 C-terminal%3B DNA mismatch repair protein MutS%2C C-terminal~SMART: DNA mismatch repair protein MutS%2C C-terminal%3B DNA mismatch repair protein MutS%2C core%3B Smr protein/MutS2 C-terminal~SPTR: MutS2 protein%3B~IMG reference gene:2504784136~PFAM: MutS domain V%3B Smr domain~TIGRFAM: MutS2 family protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0750 Thena_0751 Thena_0751 Thena_0751 731973 732617 + hypothetical protein IMG reference gene:2504784137 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0751 Thena_0752 Thena_0752 Thena_0752 732678 733157 + transcription elongation factor GreA COGs: COG0782 Transcription elongation factor~HAMAP: Transcription elongation factor greA~InterPro IPR001437:IPR006359~KEGG: transcription elongation factor GreA~PFAM: Transcription elongation factor%2C GreA/GreB region%2C prokaryotic~SPTR: GreA/GreB family elongation factor%3B~TIGRFAM: Prokaryotic transcription elongation factor GreA~IMG reference gene:2504784138~PFAM: domain%3B Transcription elongation factor%2C GreA/GreB%2C C-term~TIGRFAM: transcription elongation factor GreA gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0752 Thena_0753 Thena_0753 Thena_0753 733144 734646 + Lysyl-tRNA synthetase COGs: COG1190 Lysyl-tRNA synthetase (class II)~HAMAP: Lysyl-tRNA synthetase~InterPro IPR004365:IPR004364:IPR002313~KEGG: cow:Calow_0536 lysyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (D/K/N)%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type~PRIAM: Lysine--tRNA ligase~SPTR: Lysyl-tRNA synthetase%3B~TIGRFAM: Lysyl-tRNA synthetase%2C class II~IMG reference gene:2504784139~PFAM: tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: lysyl-tRNA synthetase%2C eukaryotic and non-spirochete bacterial gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0753 Thena_0754 Thena_0754 Thena_0754 734666 736228 + single-stranded nucleic acid binding R3H domain-containing protein COGs: COG3854 conserved hypothetical protein~InterPro IPR011703:IPR001374:IPR003593~KEGG: dth:DICTH_0629 single-stranded nucleic acid binding R3H~PFAM: Single-stranded nucleic acid binding R3H%3B ATPase associated with various cellular activities%2C AAA-3~SMART: ATPase%2C AAA+ type%2C core%3B Single-stranded nucleic acid binding R3H~SPTR: Single-stranded nucleic acid binding R3H%3B~IMG reference gene:2504784140~PFAM: ATPase family associated with various cellular activities (AAA)%3B R3H domain gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0754 Thena_0755 Thena_0755 Thena_0755 736218 736862 + Thymidylate kinase COGs: COG0125 Thymidylate kinase~HAMAP: Thymidylate kinase~InterPro IPR000062:IPR018094~KEGG: slp:Slip_0046 thymidylate kinase~PFAM: Thymidylate kinase-like~PRIAM: dTMP kinase~SPTR: Thymidylate kinase%3B~TIGRFAM: Thymidylate kinase~IMG reference gene:2504784141~PFAM: Thymidylate kinase~TIGRFAM: thymidylate kinase gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0755 Thena_0756 Thena_0756 Thena_0756 736844 737731 + hypothetical protein IMG reference gene:2504784142 gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0756 Thena_0757 Thena_0757 Thena_0757 737732 738538 + PSP1 domain protein COGs: COG1774 Uncharacterized homolog of PSP1~InterPro IPR007557~KEGG: dth:DICTH_0633 tpl protein~PFAM: PSP1%2C C-terminal~SPTR: Tpl protein%3B~IMG reference gene:2504784143~PFAM: PSP1 C-terminal conserved region gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0757 Thena_0758 Thena_0758 Thena_0758 738525 739262 + peptidase M48 Ste24p COGs: COG4783 Putative Zn-dependent protease contains TPR repeats~InterPro IPR001915~KEGG: afn:Acfer_1638 peptidase M48 Ste24p~PFAM: Peptidase M48%2C Ste24p~SPTR: Peptidase M48%2C Ste24p%3B~IMG reference gene:2504784144~PFAM: Peptidase family M48 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0758 Thena_0759 Thena_0759 Thena_0759 739288 740337 + Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase COGs: COG0166 Glucose-6-phosphate isomerase~InterPro IPR019490~KEGG: dtu:Dtur_1271 bifunctional phosphoglucose/phosphomannose isomerase~PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase%2C C-terminal~SPTR: Bifunctional phosphoglucose/phosphomannose isomerase%3B~IMG reference gene:2504784145~PFAM: Bacterial phospho-glucose isomerase C-terminal region~TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0759 Thena_0760 Thena_0760 Thena_0760 740303 740962 - HhH-GPD family protein COGs: COG0177 EndoIII-related endonuclease~InterPro IPR003265:IPR003651~KEGG: shc:Shell_1073 DNA-(apurinic or apyrimidinic site) lyase~PFAM: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~SMART: HhH-GPD domain%3B Endonuclease III-like%2C iron-sulphur cluster loop motif~SPTR: DNA-(Apurinic or apyrimidinic site) lyase%3B~IMG reference gene:2504784146~PFAM: HhH-GPD superfamily base excision DNA repair protein gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0760 Thena_0761 Thena_0761 Thena_0761 741329 742582 - Integrase catalytic region InterPro IPR001584~KEGG: kol:Kole_0335 integrase catalytic region~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~IMG reference gene:2504784148~PFAM: Integrase core domain gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0761 Thena_0762 Thena_0762 Thena_0762 742739 744106 - Integrase catalytic region InterPro IPR001584~KEGG: dau:Daud_1501 integrase catalytic subunit~PFAM: Integrase%2C catalytic core~SPTR: Integrase%2C catalytic region%3B~IMG reference gene:2504784149~PFAM: Integrase core domain gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0762 Thena_0763 Thena_0763 Thena_0763 744471 744677 + cold-shock DNA-binding domain protein COGs: COG1278 Cold shock protein~InterPro IPR002059:IPR011129~KEGG: bts:Btus_1957 cold-shock DNA-binding domain protein~PFAM: Cold-shock protein%2C DNA-binding~SMART: Cold shock protein~SPTR: Cold-shock DNA-binding domain protein%3B~IMG reference gene:2504784151~PFAM: 'Cold-shock' DNA-binding domain gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0763 Thena_0764 Thena_0764 Thena_0764 744854 745393 + sigma 54 modulation protein/ribosomal protein S30EA COGs: COG1544 Ribosome-associated protein Y (PSrp-1)~InterPro IPR003489~KEGG: ckn:Calkro_0527 sigma 54 modulation protein/ribosomal protein s30ea~PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein~SPTR: Sigma 54 modulation protein/ribosomal protein S30EA%3B~TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein~IMG reference gene:2504784152~PFAM: Sigma 54 modulation protein / S30EA ribosomal protein~TIGRFAM: ribosomal subunit interface protein gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0764 Thena_0765 Thena_0765 Thena_0765 745411 747927 + Protein translocase subunit secA COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase)~HAMAP: Protein translocase subunit secA~InterProIPR011115:IPR011130:IPR001650:IPR011116:IPR 004027:IPR000185~KEGG: toc:Toce_1709 protein translocase subunit SecA~PFAM: SecA DEAD-like%3B SecA preprotein cross-linking region%3B DNA/RNA helicase%2C C-terminal%3B SecA Wing/Scaffold%3B SEC-C motif~SMART: DNA/RNA helicase%2C C-terminal~SPTR: Protein translocase subunit secA%3B~TIGRFAM: SecA protein~IMG reference gene:2504784153~PFAM: SecA DEAD-like domain%3B SecA preprotein cross-linking domain%3B Helicase conserved C-terminal domain%3B SEC-C motif%3B SecA Wing and Scaffold domain~TIGRFAM: preprotein translocase%2C SecA subunit gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0765 Thena_0766 Thena_0766 Thena_0766 747924 749016 + peptide chain release factor 2 IMG reference gene:2504784154~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 2 gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0766 Thena_0767 Thena_0767 Thena_0767 749017 750942 + hypothetical protein KEGG: hor:Hore_16410 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784155 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0767 Thena_0768 Thena_0768 Thena_0768 750939 751613 + Cytidylate kinase COGs: COG0283 Cytidylate kinase~HAMAP: Cytidylate kinase~InterPro IPR000623:IPR011994:IPR003136~KEGG: taf:THA_1828 cytidylate kinase~PFAM: Cytidylate kinase region%3B Shikimate kinase~SPTR: Cytidylate kinase%3B~TIGRFAM: Cytidylate kinase~IMG reference gene:2504784156~PFAM: Cytidylate kinase%3B Shikimate kinase~TIGRFAM: cytidylate kinase gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0768 Thena_0769 Thena_0769 Thena_0769 751639 752469 + Transketolase COGs: COG3959 Transketolase N-terminal subunit~InterPro IPR005474~KEGG: adg:Adeg_1861 transketolase domain protein~PFAM: Transketolase%2C N-terminal~PRIAM: Transketolase~SPTR: Transketolase domain protein%3B~IMG reference gene:2504784157~PFAM: Transketolase%2C thiamine diphosphate binding domain gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0769 Thena_0770 Thena_0770 Thena_0770 752466 753386 + 1-deoxy-D-xylulose-5-phosphate synthase COGs: COG3958 Transketolase C-terminal subunit~InterPro IPR005475:IPR005476~KEGG: ttm:Tthe_1907 transketolase central region~PFAM: Transketolase-like%2C pyrimidine-binding domain%3B Transketolase%2C C-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase~SPTR: Transketolase%2C pyridine binding domain protein%3B~IMG reference gene:2504784158~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0770 Thena_0771 Thena_0771 Thena_0771 753388 754083 + Phosphonate-transporting ATPase COGs: COG2884 ATPase involved in cell division~InterPro IPR003439:IPR003593~KEGG: dhd:Dhaf_4742 cell division ATP-binding protein FtsE~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784159~PFAM: ABC transporter~TIGRFAM: cell division ATP-binding protein FtsE gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0771 Thena_0772 Thena_0772 Thena_0772 754076 754972 + protein of unknown function DUF214 COGs: COG2177 Cell division protein~InterPro IPR003838~KEGG: hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784160~PFAM: Predicted permease gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0772 Thena_0773 Thena_0773 Thena_0773 754973 755602 - phage SPO1 DNA polymerase-related protein COGs: COG1573 Uracil-DNA glycosylase~InterPro IPR005122:IPR005273~KEGG: taf:THA_392 uracil-DNA glycosylase~PFAM: Uracil-DNA glycosylase-like~SPTR: Uracil-DNA glycosylase%3B~TIGRFAM: Phage SPO1 DNA polymerase-related protein~IMG reference gene:2504784161~PFAM: Uracil DNA glycosylase superfamily~TIGRFAM: uracil-DNA glycosylase%2C family 4 gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0773 Thena_0774 Thena_0774 Thena_0774 755730 756224 + putative protein-S-isoprenylcysteine methyltransferase-like protein COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase~KEGG: sus:Acid_6384 putative protein-S-isoprenylcysteine methyltransferase-like protein~SPTR: Putative uncharacterized protein%3B~manually curated~IMG reference gene:2504784162 gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0774 Thena_0775 Thena_0775 Thena_0775 756236 757231 + dTDP-glucose 4%2C6-dehydratase COGs: COG1088 dTDP-D-glucose 4 6-dehydratase~InterPro IPR001509:IPR005888~KEGG: hya:HY04AAS1_1572 dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~PRIAM: dTDP-glucose 4%2C6-dehydratase~SPTR: dTDP-glucose 4%2C6-dehydratase%3B~TIGRFAM: dTDP-glucose 4%2C6-dehydratase~IMG reference gene:2504784163~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: dTDP-glucose 4%2C6-dehydratase gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0775 Thena_0776 Thena_0776 Thena_0776 757213 758172 - pseudouridine synthase%2C RluA family COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR002942:IPR006145:IPR006225~KEGG: toc:Toce_1015 ribosomal large subunit pseudouridine synthase D~PFAM: Pseudouridine synthase%2C RsuA and RluB/C/D/E/F%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: Ribosomal large subunit pseudouridine synthase D%3B~TIGRFAM: Pseudouridine synthase%2C RluC/RluD~IMG reference gene:2504784164~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase%2C RluA family gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0776 Thena_0777 Thena_0777 Thena_0777 758184 759731 - protein of unknown function DUF814 COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP~InterPro IPR008616:IPR008532~KEGG: ddf:DEFDS_0624 fibronectin/fibrinogen-binding protein~PFAM: Protein of unknown function DUF814%3B Fibronectin-binding A%2C N-terminal~SPTR: Fibronectin/fibrinogen-binding protein%3B~manually curated~IMG reference gene:2504784165~PFAM: Domain of unknown function (DUF814)%3B Fibronectin-binding protein A N-terminus (FbpA) gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0777 Thena_0778 Thena_0778 Thena_0778 759715 760494 - thiazole biosynthesis enzyme COGs: COG1635 Flavoprotein involved in thiazole biosynthesis~InterPro IPR002922~KEGG: tna:CTN_1791 ribulose-1%2C5-biphosphate synthetase~PFAM: Thiamine biosynthesis Thi4 protein~SPTR: Putative thiazole biosynthetic enzyme%3B~TIGRFAM: Thiamine biosynthesis Thi4 protein~IMG reference gene:2504784166~PFAM: Thi4 family~TIGRFAM: thiazole biosynthesis enzyme gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0778 Thena_0779 Thena_0779 Thena_0779 760664 760912 - pseudogene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0779 Thena_0780 Thena_0780 Thena_0780 761373 763280 + Chaperone protein dnaK COGs: COG0443 Molecular chaperone~HAMAP: Chaperone DnaK~InterPro IPR013126:IPR012725~KEGG: cag:Cagg_2956 chaperone protein DnaK~PFAM: Heat shock protein 70~SPTR: Chaperone protein dnaK 2%3B~TIGRFAM: Chaperone DnaK~IMG reference gene:2504784168~PFAM: Hsp70 protein~TIGRFAM: chaperone protein DnaK gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0780 Thena_0781 Thena_0781 Thena_0781 763474 764046 + Protein grpE COGs: COG0576 Molecular chaperone GrpE (heat shock protein)~HAMAP: GrpE nucleotide exchange factor~InterPro IPR000740~KEGG: sha:SH1335 heat shock protein GrpE~PFAM: GrpE nucleotide exchange factor~SPTR: Protein grpE%3B~IMG reference gene:2504784169~PFAM: GrpE gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0781 Thena_0782 Thena_0782 Thena_0782 764036 764941 + heat shock protein DnaJ domain protein COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~InterPro IPR001623:IPR002939~KEGG: dra:DR_0126 DnaJ protein~PFAM: Heat shock protein DnaJ%2C N-terminal%3B Chaperone DnaJ%2C C-terminal~SMART: Heat shock protein DnaJ%2C N-terminal~SPTR: Septum site-determining protein MinC%3B~IMG reference gene:2504784170~PFAM: DnaJ domain%3B DnaJ C terminal region gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0782 Thena_0783 Thena_0783 Thena_0783 764941 765270 + regulatory protein MerR InterPro IPR000551~KEGG: ddf:DEFDS_1926 MerR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C MerR~SMART: HTH transcriptional regulator%2C MerR~SPTR: Transcriptional regulator%2C MerR family%3B~IMG reference gene:2504784171~PFAM: MerR family regulatory protein gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0783 Thena_0784 Thena_0784 Thena_0784 765257 767659 + ATPase AAA-2 domain protein COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterProIPR004176:IPR003959:IPR013093:IPR019489:IPR 003593~KEGG: ATP-dependent Clp protease ATP-binding subunit~PFAM: ATPase associated with various cellular activities%2C AAA-2%3B ATPase%2C AAA-type%2C core%3B Clp%2C N-terminal%3B Clp ATPase%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATPase AAA-2 domain protein%3B~IMG reference gene:2504784172~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B Clp amino terminal domain%3B ATPase family associated with various cellular activities (AAA) gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0784 Thena_0785 Thena_0785 Thena_0785 767659 768489 + protein of unknown function DUF114 COGs: COG0616 Periplasmic serine protease (ClpP class)~InterPro IPR002825~KEGG: adg:Adeg_0215 protein of unknown function DUF114~PFAM: Protein of unknown function DUF114~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784173~PFAM: Serine dehydrogenase proteinase gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0785 Thena_0786 Thena_0786 Thena_0786 768489 769136 + Guanylate kinase COGs: COG0194 Guanylate kinase~HAMAP: Guanylate kinase%2C sub-group~InterPro IPR008144:IPR008145:IPR017665~KEGG: thx:Thet_1139 guanylate kinase~PFAM: Guanylate kinase~PRIAM: Guanylate kinase~SMART: Guanylate kinase/L-type calcium channel region~SPTR: Guanylate kinase%3B~TIGRFAM: Guanylate kinase%2C sub-group~IMG reference gene:2504784174~PFAM: Guanylate kinase~TIGRFAM: guanylate kinase gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0786 Thena_0787 Thena_0787 Thena_0787 769139 769330 + DNA-directed RNA polymerase subunit omega HAMAP: DNA-directed RNA polymerase%2C omega subunit~InterPro IPR006110:IPR003716~PFAM: RNA polymerase Rpb6~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~IMG reference gene:2504784175~PFAM: RNA polymerase Rpb6~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0787 Thena_0788 Thena_0788 Thena_0788 769332 770510 + phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase~InterPro IPR003382:IPR007085:IPR005252~KEGG: clj:CLJU_c12540 phosphopantothenoylcysteine synthase/decarboxylase~PFAM: DNA/pantothenate metabolism flavoprotein%2C C-terminal%3B Flavoprotein~PRIAM: Phosphopantothenate--cysteine ligase~SPTR: Phosphopantothenoylcysteine synthase/decarboxylase%3B~TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase~IMG reference gene:2504784176~PFAM: DNA / pantothenate metabolism flavoprotein%3B Flavoprotein~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase%2C prokaryotic gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0788 Thena_0789 Thena_0789 Thena_0789 770563 771315 + Pyridoxine 5'-phosphate synthase COGs: COG0854 Pyridoxal phosphate biosynthesis protein~HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ~InterPro IPR004569~KEGG: sul:SYO3AOP1_1675 pyridoxine 5'-phosphate synthase~PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ~PRIAM: Pyridoxine 5'-phosphate synthase~SPTR: Pyridoxine 5'-phosphate synthase%3B~TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ~IMG reference gene:2504784177~PFAM: Pyridoxal phosphate biosynthesis protein PdxJ~TIGRFAM: pyridoxine 5'-phosphate synthase gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0789 Thena_0790 Thena_0790 Thena_0790 771326 772762 + glutamine synthetase%2C type I COGs: COG0174 Glutamine synthetase~InterPro IPR008147:IPR008146:IPR004809~KEGG: adg:Adeg_1891 glutamine synthetase%2C type I~PFAM: Glutamine synthetase%2C catalytic region%3B Glutamine synthetase%2C beta-Grasp~PRIAM: Glutamate--ammonia ligase~SPTR: Glutamine synthetase%2C type I%3B~TIGRFAM: Glutamine synthetase type I~IMG reference gene:2504784178~PFAM: Glutamine synthetase%2C catalytic domain%3B Glutamine synthetase%2C beta-Grasp domain~TIGRFAM: glutamine synthetase%2C type I gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0790 Thena_0791 Thena_0791 Thena_0791 772855 774696 + Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains~HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]~InterPro IPR000583:IPR001347:IPR005855~KEGG: chy:CHY_2010 glucosamine--fructose-6-phosphate aminotransferase~PFAM: Glutamine amidotransferase%2C class-II%3B Sugar isomerase (SIS)~PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing)~SPTR: Glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing%3B~TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase%2C isomerising~IMG reference gene:2504784179~PFAM: SIS domain%3B Glutamine amidotransferases class-II~TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0791 Thena_0792 Thena_0792 Thena_0792 774702 775619 + cation diffusion facilitator family transporter COGs: COG1230 Co/Zn/Cd efflux system component~InterPro IPR002524~KEGG: cni:Calni_0176 cation diffusion facilitator family transporter~PFAM: Cation efflux protein~SPTR: Cation diffusion facilitator family transporter%3B~TIGRFAM: Cation efflux protein~IMG reference gene:2504784180~PFAM: Cation efflux family~TIGRFAM: cation diffusion facilitator family transporter gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0792 Thena_0793 Thena_0793 Thena_0793 775666 777102 + YjeF-related protein COGs: COG0063 sugar kinase~InterPro IPR004443:IPR000631~KEGG: thx:Thet_1955 carbohydrate kinase%2C YjeF related protein~PFAM: YjeF-related protein%2C N-terminal%3B Uncharacterised protein family%2C carbohydrate kinase-related~SPTR: Carbohydrate kinase%2C YjeF related protein%3B~TIGRFAM: Uncharacterised protein family%2C carbohydrate kinase-related%3B YjeF-related protein%2C N-terminal~IMG reference gene:2504784181~PFAM: YjeF-related protein N-terminus%3B Carbohydrate kinase~TIGRFAM: yjeF N-terminal region%3B yjeF C-terminal region%2C hydroxyethylthiazole kinase-related gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0793 Thena_0794 Thena_0794 Thena_0794 777128 778237 + hypothetical protein IMG reference gene:2504784182 gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0794 Thena_0795 Thena_0795 Thena_0795 778804 779277 + ERG4/ERG24 ergosterol biosynthesis protein COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase~InterPro IPR001171~KEGG: mvo:Mvol_0630 putative protein-S-isoprenylcysteine methyltransferase-like protein~PFAM: Ergosterol biosynthesis ERG4/ERG24~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784185~PFAM: 3-oxo-5-alpha-steroid 4-dehydrogenase gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0795 Thena_0796 Thena_0796 Thena_0796 779250 779465 + hypothetical protein IMG reference gene:2504784186 gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0796 Thena_0797 Thena_0797 Thena_0797 780424 781641 + translation elongation factor Tu COGs: COG0050 GTPase - translation elongation factors~InterProIPR000795:IPR004161:IPR004160:IPR004541:IPR 005225~KEGG: dth:DICTH_0835 elongation factor Tu~PFAM: Protein synthesis factor%2C GTP-binding%3B Translation elongation factor EFTu/EF1A%2C domain 2%3B Translation elongation factor EFTu/EF1A%2C C-terminal~SPTR: Elongation factor Tu 1%3B~TIGRFAM: Translation elongation factor EFTu/EF1A%2C bacterial/organelle%3B Small GTP-binding protein~IMG reference gene:2504784189~PFAM: Elongation factor Tu C-terminal domain%3B Elongation factor Tu domain 2%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0797 Thena_0798 Thena_0798 Thena_0798 781684 782475 + ABC-type transporter%2C integral membrane subunit COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: ddf:DEFDS_0133 peptide/nickel ABC transporter permease~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Peptide/nickel ABC transporter%2C permease%3B~IMG reference gene:2504784190~PFAM: Binding-protein-dependent transport system inner membrane component gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0798 Thena_0799 Thena_0799 Thena_0799 782481 784535 + UvrABC system protein B COGs: COG0556 Helicase subunit of the DNA excision repair complex~HAMAP: Excinuclease ABC%2C B subunit~InterProIPR006935:IPR001650:IPR001943:IPR014001:IPR 004807~KEGG: dth:DICTH_0731 excinuclease ABC%2C B subunit~PFAM: DNA/RNA helicase%2C C-terminal%3B Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit%3B UvrB/UvrC protein~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Excinuclease ABC%2C B subunit%3B~TIGRFAM: Excinuclease ABC%2C B subunit~IMG reference gene:2504784191~PFAM: Helicase conserved C-terminal domain%3B UvrB/uvrC motif%3B Type III restriction enzyme%2C res subunit%3B Ultra-violet resistance protein B~TIGRFAM: excinuclease ABC%2C B subunit gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0799 Thena_0800 Thena_0800 Thena_0800 784489 785157 + protein of unknown function UPF0001 COGs: COG0325 enzyme with a TIM-barrel fold~InterPro IPR001608:IPR011078~KEGG: dal:Dalk_0394 alanine racemase domain protein~PFAM: Alanine racemase%2C N-terminal~SPTR: Alanine racemase domain protein%3B~TIGRFAM: pyridoxal phosphate-dependent enzyme%2C YBL036C type~IMG reference gene:2504784192~PFAM: Alanine racemase%2C N-terminal domain~TIGRFAM: pyridoxal phosphate enzyme%2C YggS family gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0800 Thena_0801 Thena_0801 Thena_0801 785154 785951 + pyrroline-5-carboxylate reductase COGs: COG0345 Pyrroline-5-carboxylate reductase~InterPro IPR004455:IPR000304~KEGG: aar:Acear_0877 pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase%2C coenzyme F420-dependent~PRIAM: Pyrroline-5-carboxylate reductase~SPTR: Pyrroline-5-carboxylate reductase%3B~TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase~IMG reference gene:2504784193~PFAM: NADP oxidoreductase coenzyme F420-dependent~TIGRFAM: pyrroline-5-carboxylate reductase gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0801 Thena_0802 Thena_0802 Thena_0802 785948 786445 + DivIVA domain protein InterPro IPR007793:IPR019933~KEGG: aoe:Clos_1411 DivIVA family protein~PFAM: DivIVA~SPTR: DivIVA family protein%3B~TIGRFAM: DivIVA domain~IMG reference gene:2504784194~PFAM: DivIVA protein~TIGRFAM: DivIVA domain gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0802 Thena_0803 Thena_0803 Thena_0803 786448 786708 + UPF0235 protein yggU HAMAP: Protein of unknown function DUF167~InterPro IPR003746~KEGG: brm:Bmur_1218 protein of unknown function DUF167~PFAM: Protein of unknown function DUF167~SPTR: UPF0235 protein Bmur_1218%3B~IMG reference gene:2504784195~PFAM: Uncharacterised ACR%2C YggU family COG1872~TIGRFAM: TIGR00251 family protein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0803 Thena_0804 Thena_0804 Thena_0804 786715 787578 + inosine guanosine and xanthosine phosphorylase family COGs: COG0005 Purine nucleoside phosphorylase~InterPro IPR000845:IPR011268~KEGG: kol:Kole_1712 purine nucleoside phosphorylase~PFAM: Nucleoside phosphorylase~PRIAM: Purine-nucleoside phosphorylase~SPTR: Purine nucleoside phosphorylase I%2C inosine and guanosine-specific%3B~TIGRFAM: Inosine guanosine/xanthosine phosphorylase~IMG reference gene:2504784196~PFAM: Phosphorylase superfamily~TIGRFAM: inosine guanosine and xanthosine phosphorylase family gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0804 Thena_0805 Thena_0805 Thena_0805 787562 788122 + L-fuculose-phosphate aldolase COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase~InterPro IPR001303~KEGG: tsi:TSIB_0907 L-fuculose phosphate aldolase~PFAM: Class II aldolase/adducin%2C N-terminal~PRIAM: L-fuculose-phosphate aldolase~SPTR: Fuculose-1-phosphate aldolase%3B~IMG reference gene:2504784197~PFAM: Class II Aldolase and Adducin N-terminal domain~TIGRFAM: L-ribulose-5-phosphate 4-epimerase gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0805 Thena_0806 Thena_0806 Thena_0806 788148 789158 + Methylthioribose-1-phosphate isomerase COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family~HAMAP: Methylthioribose-1-phosphate isomerase~InterPro IPR000649:IPR005251:IPR011559~KEGG: hya:HY04AAS1_0595 translation initiation factor%2C aIF-2BI family~PFAM: Initiation factor 2B related~PRIAM: S-methyl-5-thioribose-1-phosphate isomerase~SPTR: Translation initiation factor%2C aIF-2BI family%3B~TIGRFAM: Putative translation initiation factor%2C aIF-2BI/5-methylthioribose-1-phosphate isomerase%3B Initiation factor 2B alpha/beta/delta~IMG reference gene:2504784198~PFAM: Initiation factor 2 subunit family~TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins%3B S-methyl-5-thioribose-1-phosphate isomerase gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0806 Thena_0807 Thena_0807 Thena_0807 789213 791969 + Isoleucyl-tRNA synthetase COGs: COG0060 Isoleucyl-tRNA synthetase~HAMAP: Isoleucyl-tRNA synthetase~InterPro IPR002300:IPR013155:IPR010663:IPR002301~KEGG: tit:Thit_1439 isoleucyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ia%3B Valyl/Leucyl/Isoleucyl-tRNA synthetase%2C class I%2C anticodon-binding%3B DNA glycosylase/AP lyase/isoleucyl tRNA synthetase%2C zinc finger domain~PRIAM: Isoleucine--tRNA ligase~SPTR: Isoleucyl-tRNA synthetase%3B~TIGRFAM: Isoleucyl-tRNA synthetase%2C class Ia~IMG reference gene:2504784199~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain%3B Zinc finger found in FPG and IleRS~TIGRFAM: isoleucyl-tRNA synthetase gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0807 Thena_0808 Thena_0808 Thena_0808 791953 793188 + Adenosylhomocysteinase COGs: COG0499 S-adenosylhomocysteine hydrolase~HAMAP: Adenosylhomocysteinase~InterPro IPR000043:IPR015878~KEGG: iho:Igni_0040 adenosylhomocysteinase~PFAM: S-adenosyl-L-homocysteine hydrolase%2C NAD binding%3B S-adenosyl-L-homocysteine hydrolase~PRIAM: Adenosylhomocysteinase~SPTR: Adenosylhomocysteinase%3B~TIGRFAM: S-adenosyl-L-homocysteine hydrolase~IMG reference gene:2504784200~PFAM: S-adenosyl-L-homocysteine hydrolase%2C NAD binding domain%3B S-adenosyl-L-homocysteine hydrolase~TIGRFAM: adenosylhomocysteinase gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0808 Thena_0809 Thena_0809 Thena_0809 794054 794245 - hypothetical protein KEGG: hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784202~PFAM: Protein of unknown function (DUF2892) gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0809 Thena_0810 Thena_0810 Thena_0810 794458 796986 + diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG2200 FOG: EAL domain~InterPro IPR013767:IPR000160:IPR001633:IPR000014~KEGG: saf:SULAZ_0401 PAS fold family protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS~SPTR: PAS fold family protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784203~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0810 Thena_0811 Thena_0811 Thena_0811 797116 797328 + cold-shock DNA-binding domain protein COGs: COG1278 Cold shock protein~InterPro IPR002059:IPR011129~KEGG: clo:HMPREF0868_1039 cold-shock DNA-binding domain-containing protein~PFAM: Cold-shock protein%2C DNA-binding~SMART: Cold shock protein~SPTR: Cold-shock DNA-binding protein family%3B~IMG reference gene:2504784204~PFAM: 'Cold-shock' DNA-binding domain gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0811 Thena_0812 Thena_0812 Thena_0812 797315 797437 - hypothetical protein IMG reference gene:2504784205 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0812 Thena_0813 Thena_0813 Thena_0813 797434 798246 - protein of unknown function DUF81 InterPro IPR002781~KEGG: bcy:Bcer98_1177 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784206~PFAM: Sulfite exporter TauE/SafE gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0813 Thena_0814 Thena_0814 Thena_0814 798571 799329 + CRISPR-associated protein Cas6 COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR002743:IPR010156~KEGG: taf:THA_1961 cas CRISPR-associated protein Cas6~PFAM: Protein of unknown function DUF57~SPTR: Putative uncharacterized protein%3B~TIGRFAM: CRISPR-associated protein%2C Cas6~IMG reference gene:2504784207~PFAM: CRISPR associated protein Cas6~TIGRFAM: CRISPR-associated endoribonuclease Cas6 gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0814 Thena_0815 Thena_0815 Thena_0815 799334 801076 + CRISPR-associated protein Csh1 domain protein InterPro IPR013389:IPR013420~KEGG: CRISPR-associated protein~PFAM: CRISPR-associated protein TM1802~SPTR: CRISPR-associated protein%2C TM1802 family%3B~TIGRFAM: CRISPR-associated protein Csh1%2C C-terminal%3B CRISPR-associated protein TM1802~IMG reference gene:2504784208~PFAM: CRISPR-associated protein TM1802 (cas_TM1802)~TIGRFAM: CRISPR-associated protein%2C TM1802 family%3B CRISPR-associated protein Cas8b/Csh1%2C subtype I-B/HMARI gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0815 Thena_0816 Thena_0816 Thena_0816 801139 802056 + CRISPR-associated protein%2C Csh2 family COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR006482:IPR013419~KEGG: dtu:Dtur_0623 CRISPR-associated protein%2C Csh2 family~PFAM: CRISPR-associated protein TM1801~SPTR: CRISPR-associated protein%2C Csh2 family%3B~TIGRFAM: CRISPR-associated protein Csh2%3B CRISPR-associated protein TM1801~IMG reference gene:2504784209~PFAM: Family of unknown function (DUF694)~TIGRFAM: CRISPR-associated protein%2C CT1132 family%3B CRISPR-associated protein Cas7/Csh2%2C subtype I-B/HMARI gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0816 Thena_0817 Thena_0817 Thena_0817 802062 802778 + CRISPR-associated protein Cas5%2C Hmari subtype InterPro IPR007552:IPR013421:IPR013422~KEGG: tit:Thit_2285 CRISPR-associated protein Cas5%2C Hmari subtype~SPTR: CRISPR-associated protein Cas5%2C Hmari subtype%3B~TIGRFAM: CRISPR-associated protein Cas5%2C HALMA%3B CRISPR-associated protein Cas5~IMG reference gene:2504784210~PFAM: CRISPR-associated protein (Cas_Cas5)~TIGRFAM: CRISPR-associated protein Cas5%2C subtype I-B/HMARI%3B CRISPR-associated protein Cas5%2C N-terminal domain gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0817 Thena_0818 Thena_0818 Thena_0818 802747 805098 + CRISPR-associated HD domain protein COGs: COG1203 helicase~InterPro IPR001650:IPR014001:IPR006483:IPR006474~KEGG: tit:Thit_2284 CRISPR-associated helicase Cas3~PFAM: DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: CRISPR-associated helicase Cas3%3B~TIGRFAM: CRISPR-associated HD domain%3B Helicase Cas3%2C CRISPR-associated%2C core~IMG reference gene:2504784211~PFAM: Helicase conserved C-terminal domain%3B HD domain%3B Type III restriction enzyme%2C res subunit~TIGRFAM: CRISPR-associated helicase Cas3%3B CRISPR-associated endonuclease Cas3-HD gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0818 Thena_0819 Thena_0819 Thena_0819 805098 805619 + CRISPR-associated protein Cas4 COGs: COG1468 RecB family exonuclease~InterPro IPR013343~KEGG: tte:TTE2659 endonuclease~PFAM: CRISPR-associated protein Cas4~SPTR: RecB family exonuclease%3B~TIGRFAM: CRISPR-associated protein Cas4~IMG reference gene:2504784212~PFAM: Domain of unknown function DUF83~TIGRFAM: CRISPR-associated protein Cas4 gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0819 Thena_0820 Thena_0820 Thena_0820 805607 806623 + CRISPR-associated protein Cas1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR002729:IPR019858~KEGG: taf:THA_1955 cas CRISPR-associated protein Cas1~PFAM: CRISPR-associated protein Cas1~SPTR: Putative uncharacterized protein%3B~TIGRFAM: CRISPR-associated protein Cas1%2C HMARI/TNEAP subtype%3B CRISPR-associated protein Cas1~IMG reference gene:2504784213~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated endonuclease Cas1%2C subtype I-B/HMARI/TNEAP%3B CRISPR-associated endonuclease Cas1 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0820 Thena_0821 Thena_0821 Thena_0821 806623 806889 + CRISPR-associated protein Cas2 COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR003799~KEGG: tme:Tmel_0347 CRISPR-associated Cas2 family protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF196~IMG reference gene:2504784214~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated endoribonuclease Cas2 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0821 Thena_0822 Thena_0822 Thena_0822 812819 814308 + pseudogene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0822 Thena_0823 Thena_0823 Thena_0823 814295 815068 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: ddf:DEFDS_0282 transposase IS21 family~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: Transposase%2C IS21 family%3B~IMG reference gene:2504784216~PFAM: IstB-like ATP binding protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0823 Thena_0824 Thena_0824 Thena_0824 815298 816632 + hypothetical protein KEGG: thx:Thet_1099 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784217~PFAM: Domain of unknown function (DUF1887) gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0824 Thena_0825 Thena_0825 Thena_0825 816629 818128 + hypothetical protein KEGG: thx:Thet_1100 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784218 gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0825 Thena_0826 Thena_0826 Thena_0826 818125 820329 + protein of unknown function DUF324 InterPro IPR005537~KEGG: thx:Thet_1101 hypothetical protein~PFAM: Protein of unknown function DUF324~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784219 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0826 Thena_0827 Thena_0827 Thena_0827 820319 821722 + protein of unknown function DUF324 COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005537~KEGG: hypothetical protein~PFAM: Protein of unknown function DUF324~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784220~PFAM: RAMP superfamily gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0827 Thena_0828 Thena_0828 Thena_0828 821712 822272 + hypothetical protein KEGG: hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784221~TIGRFAM: CRISPR-associated protein%2C TIGR03984 family gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0828 Thena_0829 Thena_0829 Thena_0829 822290 824299 + protein of unknown function DUF324 InterPro IPR005537~KEGG: thx:Thet_1104 hypothetical protein~PFAM: Protein of unknown function DUF324~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784222~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0829 Thena_0830 Thena_0830 Thena_0830 824345 825949 - drug resistance transporter%2C EmrB/QacA subfamily COGs: COG2814 Arabinose efflux permease~InterPro IPR011701:IPR004638~KEGG: glo:Glov_1631 drug resistance transporter%2C EmrB/QacA subfamily~PFAM: Major facilitator superfamily MFS-1~SPTR: Drug resistance transporter%2C EmrB/QacA subfamily%3B~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~IMG reference gene:2504784223~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily%3B Multidrug resistance protein gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0830 Thena_0831 Thena_0831 Thena_0831 826069 826923 + metallophosphoesterase InterPro IPR004843~KEGG: gem:GM21_1792 metallophosphoesterase~PFAM: Metallophosphoesterase~SPTR: Metallophosphoesterase%3B~IMG reference gene:2504784224~PFAM: Calcineurin-like phosphoesterase gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0831 Thena_0832 Thena_0832 Thena_0832 826943 828877 - osmosensitive K+ channel signal transduction histidine kinase%2C sensor subunit KdpD COGs: COG2205 Osmosensitive K+ channel histidine kinase~InterPro IPR003852~KEGG: hya:HY04AAS1_0720 osmosensitive K channel His kinase sensor~PFAM: Signal transduction histidine kinase%2C osmosensitive K+ channel sensor%2C N-terminal~SPTR: Osmosensitive K channel His kinase sensor%3B~IMG reference gene:2504784225~PFAM: Universal stress protein family%3B Osmosensitive K+ channel His kinase sensor domain gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0832 Thena_0833 Thena_0833 Thena_0833 828867 829448 - Potassium-transporting ATPase C chain COGs: COG2156 K+-transporting ATPase c chain~HAMAP: Potassium transporting ATPase%2C C subunit~InterPro IPR003820~KEGG: bmj:BMULJ_02272 potassium-transporting ATPase subunit C~PFAM: Potassium transporting ATPase%2C C subunit~PRIAM: Potassium-transporting ATPase~SPTR: Potassium-transporting ATPase C chain%3B~TIGRFAM: Potassium transporting ATPase%2C C subunit~IMG reference gene:2504784226~PFAM: K+-transporting ATPase%2C c chain~TIGRFAM: K+-transporting ATPase%2C C subunit gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0833 Thena_0834 Thena_0834 Thena_0834 829460 831517 - Potassium-transporting ATPase B chain COGs: COG2216 High-affinity K+ transport system ATPase chain B~HAMAP: Potassium-transporting ATPase%2C B chain~InterPro IPR008250:IPR005834:IPR006391:IPR001757~KEGG: gur:Gura_1226 K+-transporting ATPase%2C B subunit~PFAM: ATPase%2C P-type%2C ATPase-associated region%3B Haloacid dehalogenase-like hydrolase~PRIAM: Copper-exporting ATPase~SPTR: Potassium-transporting ATPase B chain%3B~TIGRFAM: Potassium-transporting ATPase%2C B chain%3B ATPase%2C P-type%2C K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter~IMG reference gene:2504784227~PFAM: E1-E2 ATPase%3B haloacid dehalogenase-like hydrolase~TIGRFAM: K+-transporting ATPase%2C B subunit%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0834 Thena_0835 Thena_0835 Thena_0835 831518 833212 - Potassium-transporting ATPase A chain COGs: COG2060 K+-transporting ATPase A chain~HAMAP: ATPase%2C K+ transporting%2C A subunit~InterPro IPR004623~KEGG: glo:Glov_3230 potassium-transporting ATPase subunit A~PFAM: ATPase%2C K+ transporting%2C A subunit~PRIAM: Potassium-transporting ATPase~SPTR: Potassium-transporting ATPase A chain%3B~TIGRFAM: ATPase%2C K+ transporting%2C A subunit~IMG reference gene:2504784228~PFAM: Potassium-transporting ATPase A subunit~TIGRFAM: K+-transporting ATPase%2C KdpA gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0835 Thena_0836 Thena_0836 Thena_0836 833315 835048 - hypothetical protein KEGG: lil:LA_0425 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784229 gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0836 Thena_0837 Thena_0837 Thena_0837 835084 835452 - hypothetical protein KEGG: aar:Acear_1368 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784230 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0837 Thena_0838 Thena_0838 Thena_0838 835557 835732 - pseudogene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0838 Thena_0839 Thena_0839 Thena_0839 835817 837772 + hypothetical protein KEGG: hya:HY04AAS1_0689 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784232 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0839 Thena_0840 Thena_0840 Thena_0840 837883 838359 + pseudogene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0840 Thena_0841 Thena_0841 Thena_0841 838389 839570 + nucleotide sugar dehydrogenase COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase~InterPro IPR001732:IPR014026:IPR014027:IPR017476~KEGG: bhy:BHWA1_01693 UDP-glucose/GDP-mannose dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%2C N-terminal%3B UDP-glucose/GDP-mannose dehydrogenase%2C dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase%2C C-terminal~PRIAM: UDP-glucose 6-dehydrogenase~SPTR: UDP-glucose/GDP-mannose dehydrogenase%3B~TIGRFAM: Nucleotide sugar dehydrogenase~IMG reference gene:2504784234~PFAM: UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain~TIGRFAM: nucleotide sugar dehydrogenase gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0841 Thena_0842 Thena_0842 Thena_0842 839661 840683 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: bhy:BHWA1_01692 UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: UDP-glucose 4-epimerase%3B~IMG reference gene:2504784235~PFAM: NAD dependent epimerase/dehydratase family gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0842 Thena_0843 Thena_0843 Thena_0843 840684 841394 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: bhy:BHWA1_01691 glycosyl transferase%2C family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~IMG reference gene:2504784236~PFAM: Glycosyl transferase family 2 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0843 Thena_0844 Thena_0844 Thena_0844 841369 842631 + hypothetical protein KEGG: lil:LA_0425 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784237 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0844 Thena_0845 Thena_0845 Thena_0845 842722 842949 + hypothetical protein IMG reference gene:2504784238 gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0845 Thena_0846 Thena_0846 Thena_0846 843188 844294 + chromate transporter%2C chromate ion transporter (CHR) family COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370:IPR014047~KEGG: mja:MJ_0718 chromate resistance protein ChrA~PFAM: Chromate transporter region~SPTR: Putative uncharacterized transporter MJ0718%3B~TIGRFAM: Chromate transporter~IMG reference gene:2504784239~PFAM: Chromate transporter~TIGRFAM: chromate transporter%2C chromate ion transporter (CHR) family gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0846 Thena_0847 Thena_0847 Thena_0847 844296 845057 - Undecaprenyl-diphosphatase COGs: COG1968 Uncharacterized bacitracin resistance protein~HAMAP: Undecaprenyl-diphosphatase~InterPro IPR003824~KEGG: hya:HY04AAS1_0395 undecaprenol kinase~PFAM: Bacitracin resistance protein BacA~PRIAM: Undecaprenyl-diphosphatase~SPTR: Undecaprenyl-diphosphatase%3B~TIGRFAM: Bacitracin resistance protein BacA~IMG reference gene:2504784240~PFAM: Bacitracin resistance protein BacA~TIGRFAM: undecaprenyl-diphosphatase UppP gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0847 Thena_0848 Thena_0848 Thena_0848 845250 845537 + thiamineS protein KEGG: adg:Adeg_0408 thiamineS protein~SPTR: ThiamineS protein%3B~IMG reference gene:2504784241 gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0848 Thena_0849 Thena_0849 Thena_0849 845656 846642 + glycosyl transferase family 2 COGs: COG1216 glycosyltransferase~InterPro IPR001173~KEGG: cni:Calni_1175 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase family 2%3B~IMG reference gene:2504784242~PFAM: Glycosyl transferase family 2 gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0849 Thena_0850 Thena_0850 Thena_0850 846627 847775 + glycosyl transferase family 9 COGs: COG0859 ADP-heptose:LPS heptosyltransferase~InterPro IPR002201~KEGG: has:Halsa_2129 glycosyl transferase family 9~PFAM: Glycosyl transferase%2C family 9~SPTR: Glycosyl transferase family 9%3B~IMG reference gene:2504784243~PFAM: Glycosyltransferase family 9 (heptosyltransferase) gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0850 Thena_0851 Thena_0851 Thena_0851 847768 848796 + glycosyl transferase family 9 COGs: COG0859 ADP-heptose:LPS heptosyltransferase~InterPro IPR002201~KEGG: pnu:Pnuc_0309 glycosyl transferase family protein~PFAM: Glycosyl transferase%2C family 9~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784244~PFAM: Glycosyltransferase family 9 (heptosyltransferase) gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0851 Thena_0852 Thena_0852 Thena_0852 848790 849716 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: hya:HY04AAS1_1578 glycosyl transferase family 2~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase family 2%3B~IMG reference gene:2504784245~PFAM: Glycosyl transferase family 2 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0852 Thena_0853 Thena_0853 Thena_0853 849747 851039 + polysaccharide biosynthesis protein COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR002797~KEGG: gka:GK3317 O-antigen transporter~PFAM: Polysaccharide biosynthesis protein~SPTR: O-antigen transporter%3B~IMG reference gene:2504784246~PFAM: Polysaccharide biosynthesis protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0853 Thena_0854 Thena_0854 Thena_0854 851052 852017 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: mma:MM_0652 glycosyltransferase~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyltransferase%3B~IMG reference gene:2504784247~PFAM: Glycosyl transferase family 2 gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0854 Thena_0855 Thena_0855 Thena_0855 852195 853136 + sulfotransferase InterPro IPR000863~KEGG: mif:Metin_0222 sulfotransferase~PFAM: Sulfotransferase~SPTR: Sulfotransferase%3B~manually curated~IMG reference gene:2504784248~PFAM: Sulfotransferase domain gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0855 Thena_0856 Thena_0856 Thena_0856 853300 854505 + protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: vpr:Vpar_1070 protein of unknown function DUF214~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Efflux ABC transporter%2C permease protein%3B~IMG reference gene:2504784249~PFAM: Predicted permease gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0856 Thena_0857 Thena_0857 Thena_0857 854574 855977 + D-lactate dehydrogenase (cytochrome) COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094:IPR004113~KEGG: dhd:Dhaf_4518 FAD linked oxidase domain protein~PFAM: FAD-linked oxidase%2C C-terminal%3B FAD linked oxidase%2C N-terminal~PRIAM: D-lactate dehydrogenase (cytochrome)~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784250~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain~TIGRFAM: glycolate oxidase%2C subunit GlcD gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0857 Thena_0858 Thena_0858 Thena_0858 856070 856255 - PilT protein domain protein KEGG: ttm:Tthe_0868 PilT protein domain protein~SPTR: PilT protein domain protein%3B~IMG reference gene:2504784251 gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0858 Thena_0859 Thena_0859 Thena_0859 856281 856466 - prevent-host-death family protein InterPro IPR006442~KEGG: ttm:Tthe_0869 prevent-host-death family protein~SPTR: Prevent-host-death family protein%3B~TIGRFAM: Prevent-host-death protein~IMG reference gene:2504784252~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0859 Thena_0860 Thena_0860 Thena_0860 856661 857692 - Aryl-alcohol dehydrogenase (NADP(+)) COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395~KEGG: ppn:Palpr_2262 aldo/keto reductase~PFAM: Aldo/keto reductase~PRIAM: Aryl-alcohol dehydrogenase (NADP(+))~SPTR: Aldo/keto reductase%3B~IMG reference gene:2504784253~PFAM: Aldo/keto reductase family gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0860 Thena_0861 Thena_0861 Thena_0861 857927 859219 + Acetamidase/Formamidase COGs: COG2421 acetamidase/formamidase~InterPro IPR004304~KEGG: gmc:GY4MC1_2460 acetamidase/formamidase~PFAM: Acetamidase/Formamidase~SPTR: Acetamidase/Formamidase%3B~IMG reference gene:2504784254~PFAM: Acetamidase/Formamidase family gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0861 Thena_0862 Thena_0862 Thena_0862 859610 862357 + 40-residue YVTN family beta-propeller repeat protein COGs: COG3391 conserved hypothetical protein~InterPro IPR007312:IPR011964~KEGG: cai:Caci_4335 phosphoesterase~PFAM: Phosphoesterase~SPTR: Phosphoesterase%3B~TIGRFAM: YVTN beta-propeller repeat~IMG reference gene:2504784255~PFAM: Phosphoesterase family%3B 3-carboxy-cis%2Ccis-muconate lactonizing enzyme~TIGRFAM: 40-residue YVTN family beta-propeller repeat gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0862 Thena_0863 Thena_0863 Thena_0863 862405 862689 - hypothetical protein IMG reference gene:2504784256 gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0863 Thena_0864 Thena_0864 Thena_0864 862787 863314 + hypothetical protein IMG reference gene:2504784257 gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0864 Thena_0865 Thena_0865 Thena_0865 863339 864352 + zinc-binding alcohol dehydrogenase family protein COGs: COG1064 Zn-dependent alcohol dehydrogenase~InterPro IPR013154:IPR014187~KEGG: dtu:Dtur_0630 zinc-binding alcohol dehydrogenase family protein~PFAM: Alcohol dehydrogenase GroES-like~SPTR: Zinc-binding alcohol dehydrogenase family protein%3B~TIGRFAM: Alcohol dehydrogenase%2C zinc-binding type 2~IMG reference gene:2504784258~PFAM: Alcohol dehydrogenase GroES-like domain~TIGRFAM: zinc-binding alcohol dehydrogenase family protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0865 Thena_0866 Thena_0866 Thena_0866 864377 865282 + Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: tko:TK0704 SAM-dependent methyltransferase~PFAM: Methyltransferase type 11~SPTR: SAM-dependent methyltransferase%2C UbiE/COQ5 family%3B~IMG reference gene:2504784259~PFAM: Methyltransferase domain gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0866 Thena_0867 Thena_0867 Thena_0867 865329 865790 + hypothetical protein KEGG: sat:SYN_02914 hypothetical protein~SPTR: Hypothetical membrane protein%3B~IMG reference gene:2504784260 gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0867 Thena_0868 Thena_0868 Thena_0868 865835 866731 + Dihydrodipicolinate synthase COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase~HAMAP: Dihydrodipicolinate synthase~InterPro IPR002220~KEGG: gvg:HMPREF0421_20691 dihydrodipicolinate synthase~PFAM: Dihydrodipicolinate synthetase~PRIAM: Dihydrodipicolinate synthase~SPTR: Dihydrodipicolinate synthase%3B~IMG reference gene:2504784261~PFAM: Dihydrodipicolinate synthetase family~TIGRFAM: dihydrodipicolinate synthase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0868 Thena_0869 Thena_0869 Thena_0869 866777 867496 + 3'-5' exonuclease%2C PolB InterPro IPR019288~KEGG: pmx:PERMA_1009 polysaccharide biosynthesis protein~PFAM: 3'-5' exonuclease%2C PolB-like~SPTR: Polysaccharide biosynthesis protein%3B~IMG reference gene:2504784262~PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0869 Thena_0870 Thena_0870 Thena_0870 867577 867882 + hypothetical protein SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784263 gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0870 Thena_0871 Thena_0871 Thena_0871 867937 868398 - hypothetical protein IMG reference gene:2504784264 gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0871 Thena_0872 Thena_0872 Thena_0872 868475 868741 + pseudogene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0872 Thena_0873 Thena_0873 Thena_0873 868863 869846 + Pyridoxine 4-dehydrogenase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395~KEGG: npu:Npun_R0571 aldo/keto reductase~PFAM: Aldo/keto reductase~PRIAM: Pyridoxine 4-dehydrogenase~SPTR: Aldo/keto reductase%3B~IMG reference gene:2504784266~PFAM: Aldo/keto reductase family gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0873 Thena_0874 Thena_0874 Thena_0874 870008 870403 + transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551~KEGG: dae:Dtox_1332 transcriptional regulator%2C MerR family~PFAM: HTH transcriptional regulator%2C MerR~SMART: HTH transcriptional regulator%2C MerR~SPTR: Transcriptional regulator%2C MerR family%3B~IMG reference gene:2504784267~PFAM: MerR family regulatory protein%3B MerR%2C DNA binding gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0874 Thena_0875 Thena_0875 Thena_0875 870523 872163 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590~KEGG: cyt:cce_5188 aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (NADP(+))~SPTR: Aldehyde dehydrogenase%3B~IMG reference gene:2504784268~PFAM: Aldehyde dehydrogenase family gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0875 Thena_0876 Thena_0876 Thena_0876 872232 872447 - hypothetical protein KEGG: ssm:Spirs_2637 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784269 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0876 Thena_0877 Thena_0877 Thena_0877 872472 873953 - Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR015590~KEGG: ssm:Spirs_2638 aldehyde dehydrogenase~PFAM: Aldehyde dehydrogenase~SPTR: Aldehyde dehydrogenase (NAD+)%3B~IMG reference gene:2504784270~PFAM: Aldehyde dehydrogenase family gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0877 Thena_0878 Thena_0878 Thena_0878 874847 877531 + diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR013767:IPR000160:IPR001633:IPR000014~KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784271~PFAM: EAL domain%3B GGDEF domain~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0878 Thena_0879 Thena_0879 Thena_0879 877638 878099 - UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: rci:RCIX1427 universal stress protein A~PFAM: UspA~SPTR: Universal stress protein A%3B~IMG reference gene:2504784272~PFAM: Universal stress protein family gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0879 Thena_0880 Thena_0880 Thena_0880 878329 880809 + leucyl-tRNA synthetase COGs: COG0495 Leucyl-tRNA synthetase~InterPro IPR015413:IPR013155:IPR002302~KEGG: csc:Csac_1819 leucyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class I (M)%3B Valyl/Leucyl/Isoleucyl-tRNA synthetase%2C class I%2C anticodon-binding~PRIAM: Valine--tRNA ligase~SPTR: Leucyl-tRNA synthetase%3B~TIGRFAM: Leucyl-tRNA synthetase%2C class Ia%2C bacterial/mitochondrial~IMG reference gene:2504784273~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain~TIGRFAM: leucyl-tRNA synthetase%2C eubacterial and mitochondrial family gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0880 Thena_0881 Thena_0881 Thena_0881 880817 881398 + Soluble ligand binding domain protein COGs: COG1555 DNA uptake protein and related DNA-binding protein~InterPro IPR019554~KEGG: ttm:Tthe_1149 competence protein ComEA helix-hairpin-helix repeat protein~PFAM: Soluble ligand binding domain~SPTR: Competence protein ComEA helix-hairpin-helix repeat protein%3B~IMG reference gene:2504784274~PFAM: SLBB domain%3B Helix-hairpin-helix motif gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0881 Thena_0882 Thena_0882 Thena_0882 881395 883026 + ComEC/Rec2-related protein InterPro IPR004477~KEGG: tit:Thit_0878 DNA internalization-related competence protein ComEC/Rec2~PFAM: ComEC/Rec2-related protein~SPTR: DNA internalization-related competence protein ComEC/Rec2%3B~TIGRFAM: ComEC/Rec2-related protein~IMG reference gene:2504784275~PFAM: Competence protein~TIGRFAM: ComEC/Rec2-related protein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0882 Thena_0883 Thena_0883 Thena_0883 883029 883895 + hypothetical protein IMG reference gene:2504784276 gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0883 Thena_0884 Thena_0884 Thena_0884 883861 884154 - 30S ribosomal protein S20 HAMAP: Ribosomal protein S20~InterPro IPR002583~KEGG: aar:Acear_0596 SSU ribosomal protein S20P~PFAM: Ribosomal protein S20~SPTR: 30S ribosomal protein S20%3B~TIGRFAM: Ribosomal protein S20~IMG reference gene:2504784277~PFAM: Ribosomal protein S20~TIGRFAM: ribosomal protein S20 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0884 Thena_0885 Thena_0885 Thena_0885 884275 885456 + Tyrosyl-tRNA synthetase COGs: COG0162 Tyrosyl-tRNA synthetase~HAMAP: Tyrosyl-tRNA synthetase~InterPro IPR002305:IPR002942:IPR002307~KEGG: aae:aq_1751 tyrosyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ib%3B RNA-binding S4~SMART: RNA-binding S4~SPTR: Tyrosyl-tRNA synthetase%3B~TIGRFAM: Tyrosyl-tRNA synthetase%2C class Ib%2C bacterial/mitochondrial~IMG reference gene:2504784278~PFAM: S4 domain%3B tRNA synthetases class I (W and Y)~TIGRFAM: tyrosyl-tRNA synthetase gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0885 Thena_0886 Thena_0886 Thena_0886 885456 885884 + deoxyuridine 5'-triphosphate nucleotidohydrolase Dut COGs: COG0756 dUTPase~InterPro IPR008180:IPR008181~KEGG: dae:Dtox_3176 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut~PFAM: DeoxyUTP pyrophosphatase domain~PRIAM: dUTP diphosphatase~SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase%3B~TIGRFAM: DeoxyUTP pyrophosphatase domain%2C subfamily 1%2C~IMG reference gene:2504784279~PFAM: dUTPase~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0886 Thena_0887 Thena_0887 Thena_0887 885962 886723 + UPF0082 protein yeeN COGs: COG0217 conserved hypothetical protein~HAMAP: Protein of unknown function DUF28~InterPro IPR002876~KEGG: saf:SULAZ_1049 hypothetical protein~PFAM: Protein of unknown function DUF28~SPTR: UPF0082 protein DAMO_2401%3B~TIGRFAM: Protein of unknown function DUF28~manually curated~IMG reference gene:2504784280~PFAM: Domain of unknown function DUF28~TIGRFAM: DNA-binding regulatory protein%2C YebC/PmpR family gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0887 Thena_0888 Thena_0888 Thena_0888 886748 887224 + Crossover junction endodeoxyribonuclease ruvC COGs: COG0817 Holliday junction resolvasome endonuclease subunit~HAMAP: Crossover junction endodeoxyribonuclease RuvC~InterPro IPR002176~KEGG: bpo:BP951000_1192 crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC~PRIAM: Crossover junction endodeoxyribonuclease~SPTR: Crossover junction endodeoxyribonuclease ruvC%3B~IMG reference gene:2504784281~PFAM: Crossover junction endodeoxyribonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0888 Thena_0889 Thena_0889 Thena_0889 887202 887786 + Holliday junction ATP-dependent DNA helicase ruvA COGs: COG0632 Holliday junction resolvasome DNA-binding subunit~HAMAP: Holliday junction ATP-dependent DNA helicase ruvA~InterPro IPR013849:IPR000445:IPR003583~KEGG: cbk:CLL_A1022 Holliday junction DNA helicase RuvA~PFAM: DNA helicase%2C Holliday junction RuvA type%2C domain I%2C bacterial%3B Helix-hairpin-helix motif~SPTR: Holliday junction ATP-dependent DNA helicase ruvA%3B~IMG reference gene:2504784282~PFAM: RuvA N terminal domain~TIGRFAM: Holliday junction DNA helicase%2C RuvA subunit gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0889 Thena_0890 Thena_0890 Thena_0890 887783 888742 + Holliday junction ATP-dependent DNA helicase ruvB COGs: COG2255 Holliday junction resolvasome helicase subunit~HAMAP: DNA helicase%2C Holliday junction RuvB type~InterProIPR008824:IPR003959:IPR008823:IPR003593:IPR 004605~KEGG: bts:Btus_0982 Holliday junction DNA helicase RuvB~PFAM: DNA helicase%2C Holliday junction RuvB type%2C C-terminal%3B ATPase%2C AAA-type%2C core%3B DNA helicase%2C Holliday junction RuvB type%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Holliday junction ATP-dependent DNA helicase ruvB%3B~TIGRFAM: DNA helicase%2C Holliday junction RuvB type~IMG reference gene:2504784283~PFAM: Holliday junction DNA helicase ruvB C-terminus%3B Holliday junction DNA helicase ruvB N-terminus~TIGRFAM: Holliday junction DNA helicase%2C RuvB subunit gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0890 Thena_0891 Thena_0891 Thena_0891 888726 889616 + 5'-3' exonuclease%2C resolvase-like domain-containing protein COGs: COG0258 5'-3' exonuclease (including N-terminal domain of PolI)~InterPro IPR020046:IPR020047:IPR002421:IPR008918~KEGG: DNA polymerase I~PFAM: 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B 5'-3' exonuclease%2C SAM-fold domain~SMART: 5'-3' exonuclease%2C N-terminal%3B Helix-hairpin-helix motif%2C class 2~SPTR: DNA polymerase I%3B~IMG reference gene:2504784284~PFAM: 5'-3' exonuclease%2C C-terminal SAM fold%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0891 Thena_0892 Thena_0892 Thena_0892 889731 891443 + 2-oxoacid:acceptor oxidoreductase%2C alpha subunit COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR019752:IPR002880~KEGG: mma:MM_0420 pyruvate synthase subunit alpha~PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal%3B Pyruvate/ketoisovalerate oxidoreductase~PRIAM: 2-oxoglutarate synthase~SPTR: Pyruvate synthase subunit alpha%3B~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C alpha subunit~IMG reference gene:2504784285~PFAM: domain%3B Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C alpha subunit gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0892 Thena_0893 Thena_0893 Thena_0893 891430 892272 + pyruvate ferredoxin/flavodoxin oxidoreductase%2C beta subunit COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766:IPR011896~KEGG: tye:THEYE_A0983 2-oxoglutarate ferredoxin oxidoreductase subunit beta~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: 2-oxoglutarate synthase~SPTR: 2-oxoacid:ferredoxin oxidoreductase subunit beta%3B~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C beta subunit%2C pyruvate/2-ketoisovalerate~IMG reference gene:2504784286~PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C beta subunit%2C pyruvate/2-ketoisovalerate family gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0893 Thena_0894 Thena_0894 Thena_0894 892266 893300 + Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197:IPR006638~KEGG: clj:CLJU_c36250 putative Fe-S oxidoreductase~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM%3B~IMG reference gene:2504784287~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM additional 4Fe4S-binding domain gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0894 Thena_0895 Thena_0895 Thena_0895 893323 893427 + hypothetical protein IMG reference gene:2504784288 gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0895 Thena_0896 Thena_0896 Thena_0896 893424 894485 + Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197:IPR006638~KEGG: radical SAM domain-containing protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM%3B~IMG reference gene:2504784289~PFAM: Radical SAM superfamily gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0896 Thena_0897 Thena_0897 Thena_0897 894487 894651 - hypothetical protein IMG reference gene:2504784290 gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0897 Thena_0898 Thena_0898 Thena_0898 894752 896341 + thioredoxin reductase COGs: COG0492 Thioredoxin reductase~InterPro IPR013027:IPR005982~KEGG: sfu:Sfum_3874 FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~PRIAM: Thioredoxin-disulfide reductase~SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B~TIGRFAM: Thioredoxin reductase~IMG reference gene:2504784291~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: thioredoxin-disulfide reductase gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0898 Thena_0899 Thena_0899 Thena_0899 896448 897341 + diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: cni:Calni_1776 diguanylate cyclase~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~IMG reference gene:2504784292~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0899 Thena_0900 Thena_0900 Thena_0900 897486 898577 + glutamine amidotransferase class-II COGs: COG0067 Glutamate synthase domain 1~InterPro IPR000583~KEGG: chy:CHY_0706 hypothetical protein~PFAM: Glutamine amidotransferase%2C class-II~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784293~PFAM: Glutamine amidotransferases class-II gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0900 Thena_0901 Thena_0901 Thena_0901 898564 900078 + Glutamate synthase (NADPH) COGs: COG0069 Glutamate synthase domain 2~InterPro IPR001450:IPR002932~KEGG: chy:CHY_0707 glutamate synthase%2C-like protein~PFAM: Glutamate synthase%2C central-C%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~PRIAM: Glutamate synthase (NADPH)~SPTR: Glutamate synthase%2C homolog%3B~IMG reference gene:2504784294~PFAM: Conserved region in glutamate synthase gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0901 Thena_0902 Thena_0902 Thena_0902 900081 900815 + glutamate synthase alpha subunit domain protein COGs: COG0070 Glutamate synthase domain 3~InterPro IPR002489~KEGG: tmt:Tmath_1316 glutamate synthase alpha subunit domain protein~PFAM: Glutamate synthase%2C alpha subunit%2C C-terminal~SPTR: Glutamate synthase alpha subunit domain protein%3B~IMG reference gene:2504784295~PFAM: GXGXG motif gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0902 Thena_0903 Thena_0903 Thena_0903 900885 902210 + replicative DNA helicase COGs: COG0305 Replicative DNA helicase~InterPro IPR007693:IPR007694:IPR003593:IPR007692~KEGG: tjr:TherJR_2972 replicative DNA helicase~PFAM: DNA helicase%2C DnaB-like%2C C-terminal%3B DNA helicase%2C DnaB-like%2C N-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: Replicative DNA helicase%3B~TIGRFAM: DNA helicase%2C DnaB type~IMG reference gene:2504784296~PFAM: DnaB-like helicase N terminal domain%3B DnaB-like helicase C terminal domain~TIGRFAM: replicative DNA helicase gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0903 Thena_0904 Thena_0904 Thena_0904 902232 903539 + Adenylosuccinate synthetase COGs: COG0104 Adenylosuccinate synthase~HAMAP: Adenylosuccinate synthetase~InterPro IPR001114~KEGG: chy:CHY_2670 adenylosuccinate synthetase~PFAM: Adenylosuccinate synthetase~PRIAM: Adenylosuccinate synthase~SMART: Adenylosuccinate synthetase~SPTR: Adenylosuccinate synthetase%3B~TIGRFAM: Adenylosuccinate synthetase~IMG reference gene:2504784297~PFAM: Adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthase gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0904 Thena_0905 Thena_0905 Thena_0905 903556 904128 + 5-formyltetrahydrofolate cyclo-ligase COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase~InterPro IPR002698~KEGG: aae:aq_1731 hypothetical protein~PFAM: 5-formyltetrahydrofolate cyclo-ligase~SPTR: 5-formyltetrahydrofolate cyclo-ligase%3B~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~IMG reference gene:2504784298~PFAM: 5-formyltetrahydrofolate cyclo-ligase family~TIGRFAM: 5%2C10-methenyltetrahydrofolate synthetase gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0905 Thena_0906 Thena_0906 Thena_0906 904125 904844 + biotin/acetyl-CoA-carboxylase ligase COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase~InterPro IPR004143:IPR004408~KEGG: tba:TERMP_00290 biotin-protein ligase~PFAM: Biotin/lipoate A/B protein ligase~SPTR: Biotin-[acetyl-CoA-carboxylase] ligase%3B~TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase~IMG reference gene:2504784299~PFAM: Biotin/lipoate A/B protein ligase family~TIGRFAM: birA%2C biotin-[acetyl-CoA-carboxylase] ligase region gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0906 Thena_0907 Thena_0907 Thena_0907 904859 906355 + threonine synthase COGs: COG0498 Threonine synthase~InterPro IPR001926:IPR004450~KEGG: cce:Ccel_1450 threonine synthase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Threonine synthase~SPTR: Threonine synthase%3B~TIGRFAM: Threonine synthase~IMG reference gene:2504784300~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: threonine synthase gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0907 Thena_0908 Thena_0908 Thena_0908 906472 909165 - diguanylate cyclase with PAS/PAC and GAF sensors COGs: COG2199 FOG: GGDEF domain~InterPro IPR003018:IPR013767:IPR000160:IPR000014~KEGG: tte:TTE1100 diguanylate cyclase/phosphodiesterase~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold%3B GAF~SMART: Diguanylate cyclase%2C predicted%3B GAF%3B PAS~SPTR: Putative diguanylate cyclase/phosphodiesterase%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784302~PFAM: GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0908 Thena_0909 Thena_0909 Thena_0909 909291 910271 + Asparaginase COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D~InterPro IPR006034~KEGG: dhd:Dhaf_3068 asparaginase~PFAM: Asparaginase/glutaminase~PRIAM: Asparaginase~SPTR: Asparaginase%3B~IMG reference gene:2504784303~PFAM: Asparaginase~TIGRFAM: L-asparaginases%2C type II gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0909 Thena_0910 Thena_0910 Thena_0910 910356 911522 + amidohydrolase COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase~InterPro IPR002933:IPR011650:IPR010168~KEGG: ckr:CKR_0577 hypothetical protein~PFAM: Peptidase M20%3B Peptidase M20%2C dimerisation~PRIAM: N-acetyldiaminopimelate deacetylase~SPTR: Amidohydrolase%3B~TIGRFAM: Peptidase M20D%2C amidohydrolase~IMG reference gene:2504784304~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidohydrolase gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0910 Thena_0911 Thena_0911 Thena_0911 911549 911743 + hypothetical protein KEGG: bgf:BC1003_3721 hypothetical protein~SPTR: YhjC%3B~IMG reference gene:2504784305~PFAM: Protein of unknown function (DUF3311) gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0911 Thena_0912 Thena_0912 Thena_0912 911755 913224 + Na+/solute symporter COGs: COG0591 Na+/proline symporter~InterPro IPR001734~KEGG: gwc:GWCH70_3173 Na+/solute symporter~PFAM: Sodium/solute symporter~SPTR: Na+/solute symporter%3B~IMG reference gene:2504784306~PFAM: Sodium:solute symporter family gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0912 Thena_0913 Thena_0913 Thena_0913 913256 913735 + ATPase with chaperone activity%2C ATP-binding subunit KEGG: saf:SULAZ_0042 ATPase with chaperone activity%2C ATP-binding subunit~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784307~PFAM: NMD3 family gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0913 Thena_0914 Thena_0914 Thena_0914 913728 914471 + protein of unknown function DUF541 COGs: COG2968 conserved hypothetical protein~InterPro IPR007497~KEGG: amt:Amet_1086 hypothetical protein~PFAM: Protein of unknown function DUF541~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784308~PFAM: Protein of unknown function (DUF541) gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0914 Thena_0915 Thena_0915 Thena_0915 914578 914949 + hypothetical protein KEGG: dae:Dtox_2715 hypothetical protein~IMG reference gene:2504784309 gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0915 Thena_0916 Thena_0916 Thena_0916 914958 915647 - glutamine amidotransferase class-I COGs: COG0518 GMP synthase - Glutamine amidotransferase domain~InterPro IPR000991~KEGG: sul:SYO3AOP1_1249 glutamine amidotransferase class-I~PFAM: Glutamine amidotransferase class-I%2C C-terminal~SPTR: Glutamine amidotransferase class-I%3B~IMG reference gene:2504784310~PFAM: Glutamine amidotransferase class-I gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0916 Thena_0917 Thena_0917 Thena_0917 915780 916811 + Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR007197:IPR006638~KEGG: tye:THEYE_A0894 cofactor modifying protein%2C putative~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Cofactor modifying protein%2C putative%3B~IMG reference gene:2504784311~PFAM: Radical SAM superfamily gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0917 Thena_0918 Thena_0918 Thena_0918 916885 918246 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: hya:HY04AAS1_0694 general substrate transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: General substrate transporter%3B~IMG reference gene:2504784312~PFAM: Sugar (and other) transporter gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0918 Thena_0919 Thena_0919 Thena_0919 918333 918740 + protein tyrosine phosphatase COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867~KEGG: dth:DICTH_0400 arsenate reductase~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: Arsenate reductase%3B~IMG reference gene:2504784313~PFAM: Low molecular weight phosphotyrosine protein phosphatase~TIGRFAM: arsenate reductase (thioredoxin) gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0919 Thena_0920 Thena_0920 Thena_0920 918749 919090 - branched-chain amino acid transport COGs: COG1687 branched-chain amino acid permease (azaleucine resistance)~InterPro IPR008407~KEGG: ant:Arnit_1641 branched-chain amino acid transport~PFAM: Branched-chain amino acid transport~SPTR: Branched-chain amino acid transport%3B~IMG reference gene:2504784314~PFAM: Branched-chain amino acid transport protein (AzlD) gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0920 Thena_0921 Thena_0921 Thena_0921 919077 919787 - AzlC family protein COGs: COG1296 branched-chain amino acid permease (azaleucine resistance)~InterPro IPR011606~KEGG: ant:Arnit_1640 AzlC family protein~PFAM: AzlC-like~SPTR: AzlC family protein%3B~IMG reference gene:2504784315~PFAM: AzlC protein~TIGRFAM: 4-azaleucine resistance probable transporter AzlC gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0921 Thena_0922 Thena_0922 Thena_0922 919937 920491 + helix-turn-helix domain protein InterPro IPR001387:IPR013096~KEGG: ppm:PPSC2_c0673 hth-type transcriptional regulator~PFAM: Helix-turn-helix type 3%3B Cupin 2%2C conserved barrel~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784316~PFAM: Cupin domain%3B Helix-turn-helix gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0922 Thena_0923 Thena_0923 Thena_0923 920546 922273 + hypothetical protein COGs: COG1331 Highly conserved protein containing a thioredoxin domain~InterPro IPR004879~KEGG: sun:SUN_1859 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784317~PFAM: Protein of unknown function%2C DUF255 gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0923 Thena_0924 Thena_0924 Thena_0924 922327 922674 + putative cytoplasmic protein KEGG: sat:SYN_00675 putative cytoplasmic protein~SPTR: Hypothetical cytosolic protein%3B~IMG reference gene:2504784318 gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0924 Thena_0925 Thena_0925 Thena_0925 922702 923586 - transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119~KEGG: clj:CLJU_c33300 putative LysR family transcriptional regulator~PFAM: LysR%2C substrate-binding%3B HTH transcriptional regulator%2C LysR~SPTR: LysR substrate binding domain protein%3B~IMG reference gene:2504784319~PFAM: LysR substrate binding domain%3B Bacterial regulatory helix-turn-helix protein%2C lysR family gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0925 Thena_0926 Thena_0926 Thena_0926 923767 924981 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504784320~PFAM: Major Facilitator Superfamily gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0926 Thena_0927 Thena_0927 Thena_0927 925097 925642 + NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: ckr:CKR_2641 hypothetical protein~PFAM: NADPH-dependent FMN reductase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784321~PFAM: NADPH-dependent FMN reductase gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0927 Thena_0928 Thena_0928 Thena_0928 925905 926564 + flavoprotein WrbA COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR010089:IPR008254~KEGG: dak:DaAHT2_0413 flavoprotein WrbA~PFAM: Flavodoxin/nitric oxide synthase~SPTR: Flavoprotein wrbA%3B~TIGRFAM: Flavoprotein WrbA~IMG reference gene:2504784323~PFAM: NADPH-dependent FMN reductase~TIGRFAM: NAD(P)H:quinone oxidoreductase%2C type IV gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0928 Thena_0929 Thena_0929 Thena_0929 926583 927551 + Glyoxylate reductase COGs: COG1052 Lactate dehydrogenase and related dehydrogenase~InterPro IPR006139:IPR006140~KEGG: bmd:BMD_3518 glyoxylate reductase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic region~PRIAM: Glyoxylate reductase~SPTR: Glyoxylate reductase%3B~IMG reference gene:2504784324~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0929 Thena_0930 Thena_0930 Thena_0930 927548 928840 - diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: pmx:PERMA_0750 diguanylate cyclase/phosphodiesterase domain 1~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted~IMG reference gene:2504784325~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0930 Thena_0931 Thena_0931 Thena_0931 928847 929317 - hypothetical protein IMG reference gene:2504784326 gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0931 Thena_0932 Thena_0932 Thena_0932 929368 931188 - WD40 repeat-containing protein InterPro IPR001680:IPR019781~KEGG: ava:Ava_3078 peptidase C14%2C caspase catalytic subunit P20~PFAM: WD40 repeat%2C subgroup~SPTR: Caspase domain protein%3B~IMG reference gene:2504784327~PFAM: WD domain%2C G-beta repeat gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0932 Thena_0933 Thena_0933 Thena_0933 931185 932036 - heat shock protein DnaJ domain protein InterPro IPR001623~KEGG: gsu:GSU2988 hypothetical protein~PFAM: Heat shock protein DnaJ%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784328~PFAM: DnaJ domain gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0933 Thena_0934 Thena_0934 Thena_0934 932055 933077 + Agmatine deiminase COGs: COG2957 Peptidylarginine deiminase~InterPro IPR007466~KEGG: aps:CFPG_617 agmatine deiminase~PFAM: Peptidyl-arginine deiminase%2C Porphyromonas-type~PRIAM: Agmatine deiminase~SPTR: Agmatine deiminase%3B~IMG reference gene:2504784329~PFAM: Porphyromonas-type peptidyl-arginine deiminase gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0934 Thena_0935 Thena_0935 Thena_0935 933082 933951 + N-carbamoylputrescine amidase COGs: COG0388 amidohydrolase~InterPro IPR003010~KEGG: geo:Geob_2344 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PRIAM: N-carbamoylputrescine amidase~SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase%3B~IMG reference gene:2504784330~PFAM: Carbon-nitrogen hydrolase gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0935 Thena_0936 Thena_0936 Thena_0936 934207 935424 + LL-diaminopimelate aminotransferase COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839~KEGG: toc:Toce_1019 LL-diaminopimelate aminotransferase apoenzyme~PFAM: Aminotransferase%2C class I/II~PRIAM: LL-diaminopimelate aminotransferase~SPTR: LL-diaminopimelate aminotransferase apoenzyme%3B~IMG reference gene:2504784333~PFAM: Aminotransferase class I and II gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0936 Thena_0937 Thena_0937 Thena_0937 935430 936686 + GTP-binding proten HflX COGs: COG2262 GTPase~InterPro IPR016496:IPR005225:IPR002917~KEGG: drm:Dred_1259 GTP-binding protein%2C HSR1-related~PFAM: GTP-binding protein%2C HSR1-related~SPTR: GTP-binding proten HflX%3B~TIGRFAM: GTP-binding protein%2C HflX%3B Small GTP-binding protein~IMG reference gene:2504784334~PFAM: GTPase of unknown function~TIGRFAM: GTP-binding protein HflX%3B small GTP-binding protein domain gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0937 Thena_0938 Thena_0938 Thena_0938 936758 938359 + transcription termination factor Rho COGs: COG1158 Transcription termination factor~InterProIPR004665:IPR011129:IPR003593:IPR011112:IPR 011113:IPR000194~KEGG: cdl:CDR20291_3324 transcription termination factor Rho~PFAM: ATPase%2C F1/V1/A1 complex%2C alpha/beta subunit%2C nucleotide-binding domain%3B Rho termination factor%2C RNA-binding%3B Rho termination factor%2C N-terminal~SMART: Cold shock protein%3B ATPase%2C AAA+ type%2C core~SPTR: Transcription termination factor Rho%3B~TIGRFAM: Transcription termination factor Rho~IMG reference gene:2504784335~PFAM: Rho termination factor%2C N-terminal domain%3B Rho termination factor%2C RNA-binding domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: transcription termination factor Rho gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0938 Thena_0939 Thena_0939 Thena_0939 938509 939540 + protein of unknown function DUF81 InterPro IPR002781~KEGG: afu:AF2125 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Conserved hypothetical transmembrane protein%3B~IMG reference gene:2504784336~PFAM: Sulfite exporter TauE/SafE gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0939 Thena_0940 Thena_0940 Thena_0940 939627 939962 + hypothetical protein KEGG: afu:AF2124 hypothetical protein~SPTR: Uncharacterized protein AF_2124%3B~IMG reference gene:2504784337 gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0940 Thena_0941 Thena_0941 Thena_0941 940259 940783 + Transcriptional regulator%2C histidine kinase sensor InterPro IPR018771~KEGG: dal:Dalk_4091 hypothetical protein~PFAM: Transcriptional regulator%2C histidine kinase sensor%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784338~PFAM: Predicted histidine kinase sensor domain gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0941 Thena_0942 Thena_0942 Thena_0942 940849 941646 + hypothetical protein IMG reference gene:2504784339 gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0942 Thena_0943 Thena_0943 Thena_0943 942183 942395 - hypothetical protein KEGG: vpa:VP1851 hypothetical protein~IMG reference gene:2504784340 gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0943 Thena_0944 Thena_0944 Thena_0944 942605 942970 + regulatory protein ArsR InterPro IPR001845~KEGG: pth:PTH_0545 transcriptional regulator~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Predicted transcriptional regulator%3B~IMG reference gene:2504784341~PFAM: Bacterial regulatory protein%2C arsR family gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0944 Thena_0945 Thena_0945 Thena_0945 943185 944387 + chromate transporter%2C chromate ion transporter (CHR) family COGs: COG2059 Chromate transport protein ChrA~InterPro IPR014047:IPR003370~KEGG: chromate transporter%2C chromate ion transporter (chr) family~PFAM: Chromate transporter region~SPTR: Chromate transporter%2C chromate ion transporter (CHR) family%3B~TIGRFAM: Chromate transporter~IMG reference gene:2504784342~PFAM: Chromate transporter~TIGRFAM: chromate transporter%2C chromate ion transporter (CHR) family gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0945 Thena_0946 Thena_0946 Thena_0946 944401 945588 - major facilitator superfamily MFS_1 COGs: COG2271 Sugar phosphate permease~InterPro IPR011701~KEGG: vpr:Vpar_1674 major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504784343~PFAM: Major Facilitator Superfamily gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0946 Thena_0947 Thena_0947 Thena_0947 945599 946018 - Lactate utilization protein B/C COGs: COG1556 conserved hypothetical protein~InterPro IPR003741~KEGG: dba:Dbac_1728 protein of unknown function DUF162~PFAM: Protein of unknown function DUF162~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784344~PFAM: Uncharacterised ACR%2C YkgG family COG1556 gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0947 Thena_0948 Thena_0948 Thena_0948 946020 948044 - Lactate utilization protein B/C COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain~InterPro IPR003741:IPR004017~KEGG: tye:THEYE_A0665 iron-sulfur cluster-binding protein~PFAM: Protein of unknown function DUF162%3B Cysteine-rich region%2C CCG~SPTR: Iron-sulfur cluster-binding protein%3B~IMG reference gene:2504784345~PFAM: Cysteine-rich domain%3B Uncharacterised ACR%2C YkgG family COG1556~TIGRFAM: iron-sulfur cluster-binding protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0948 Thena_0949 Thena_0949 Thena_0949 948288 950129 + Aldehyde ferredoxin oxidoreductase COGs: COG2414 Aldehyde:ferredoxin oxidoreductase~InterPro IPR013983:IPR001203~KEGG: pth:PTH_0494 aldehyde:ferredoxin oxidoreductase~PFAM: Aldehyde ferredoxin oxidoreductase%2C C-terminal%3B Aldehyde ferredoxin oxidoreductase%2C N-terminal~PRIAM: Aldehyde ferredoxin oxidoreductase~SMART: Aldehyde ferredoxin oxidoreductase%2C N-terminal~SPTR: Aldehyde ferredoxin oxidoreductase%3B~IMG reference gene:2504784346~PFAM: Aldehyde ferredoxin oxidoreductase%2C N-terminal domain%3B Aldehyde ferredoxin oxidoreductase%2C domains 2 %26 3 gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0949 Thena_0950 Thena_0950 Thena_0950 950177 950572 - hypothetical protein KEGG: cki:Calkr_1535 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784347 gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0950 Thena_0951 Thena_0951 Thena_0951 950707 951288 - hypothetical protein IMG reference gene:2504784348~PFAM: Transglycosylase SLT domain gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0951 Thena_0952 Thena_0952 Thena_0952 951510 952280 - inositol monophosphatase COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family~InterPro IPR000760~KEGG: rsd:TGRD_668 inositol-1-monophosphatase~PFAM: Inositol monophosphatase~SPTR: Inositol-1-monophosphatase%3B~IMG reference gene:2504784349~PFAM: Inositol monophosphatase family gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0952 Thena_0953 Thena_0953 Thena_0953 952406 953455 + hypothetical protein KEGG: bth:BT_0544 ammonium transporter~SPTR: Ammonium transporter%3B~IMG reference gene:2504784350~PFAM: Ammonium Transporter Family gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0953 Thena_0954 Thena_0954 Thena_0954 953442 954071 - response regulator receiver and ANTAR domain protein COGs: COG3707 Response regulator with putative antiterminator output domain~InterPro IPR001789:IPR005561~KEGG: dth:DICTH_0982 two-component system%2C regulatory protein~PFAM: Signal transduction response regulator%2C receiver region%3B ANTAR~SMART: Signal transduction response regulator%2C receiver region~SPTR: Two-component system%2C regulatory protein%3B~IMG reference gene:2504784351~PFAM: Response regulator receiver domain%3B ANTAR domain gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0954 Thena_0955 Thena_0955 Thena_0955 954106 955356 - signal transduction histidine kinase COGs: COG3920 Signal transduction histidine kinase~InterPro IPR011495:IPR003594~KEGG: str:Sterm_1052 signal transduction histidine kinase~PFAM: Signal transduction histidine kinase%2C subgroup 2%2C dimerisation and phosphoacceptor region%3B ATP-binding region%2C ATPase-like~SPTR: Signal transduction histidine kinase%3B~IMG reference gene:2504784352~PFAM: Histidine kinase gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0955 Thena_0956 Thena_0956 Thena_0956 955353 955970 - Orotate phosphoribosyltransferase COGs: COG0461 Orotate phosphoribosyltransferase~HAMAP: Orotate phosphoribosyltransferase~InterPro IPR000836~KEGG: cag:Cagg_3840 phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~SPTR: Phosphoribosyltransferase%3B~IMG reference gene:2504784353~PFAM: Phosphoribosyl transferase domain~TIGRFAM: orotate phosphoribosyltransferase%2C Thermus family%3B orotate phosphoribosyltransferase gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0956 Thena_0957 Thena_0957 Thena_0957 955967 956665 - orotidine 5'-phosphate decarboxylase COGs: COG0284 Orotidine-5'-phosphate decarboxylase~InterPro IPR014732:IPR001754~KEGG: orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase%2C core~PRIAM: Orotidine-5'-phosphate decarboxylase~SPTR: Orotidine 5'-phosphate decarboxylase%3B~TIGRFAM: Orotidine 5'-phosphate decarboxylase%2C subfamily 1%2C core~IMG reference gene:2504784354~PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family~TIGRFAM: orotidine 5'-phosphate decarboxylase%2C subfamily 1 gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0957 Thena_0958 Thena_0958 Thena_0958 956716 957690 - hypothetical protein KEGG: pfh:PFHG_03218 conserved hypothetical protein~IMG reference gene:2504784355~PFAM: Localisation of periplasmic protein complexes gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0958 Thena_0959 Thena_0959 Thena_0959 957887 959029 - molybdopterin binding domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR001453~KEGG: mae:Maeo_0086 molybdenum cofactor synthesis domain-containing protein~PFAM: Molybdopterin binding~SPTR: Molybdenum cofactor synthesis domain%3B~IMG reference gene:2504784356~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II) gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0959 Thena_0960 Thena_0960 Thena_0960 959016 959513 - molybdenum cofactor synthesis domain protein COGs: COG0521 Molybdopterin biosynthesis protein~InterPro IPR020817:IPR001453~KEGG: fma:FMG_0534 molybdopterin biosynthesis protein~PFAM: Molybdopterin binding~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Molybdenum cofactor synthesis~IMG reference gene:2504784357~PFAM: Probable molybdopterin binding domain~TIGRFAM: molybdenum cofactor synthesis domain gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0960 Thena_0961 Thena_0961 Thena_0961 959545 960009 - molybdenum cofactor biosynthesis protein C COGs: COG0315 Molybdenum cofactor biosynthesis enzyme~InterPro IPR002820~KEGG: sfu:Sfum_2612 molybdenum cofactor biosynthesis protein C~PFAM: Molybdopterin cofactor biosynthesis MoaC region~SPTR: Molybdenum cofactor biosynthesis protein C%3B~TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region~IMG reference gene:2504784358~PFAM: MoaC family~TIGRFAM: molybdenum cofactor biosynthesis protein MoaC gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0961 Thena_0962 Thena_0962 Thena_0962 960011 960985 - molybdenum cofactor biosynthesis protein A COGs: COG2896 Molybdenum cofactor biosynthesis protein~InterPro IPR013483:IPR006638:IPR007197:IPR010505~KEGG: tjr:TherJR_0759 molybdenum cofactor biosynthesis protein A~PFAM: Radical SAM%3B Molybdenum cofactor synthesis C-terminal~SMART: Elongator protein 3/MiaB/NifB~SPTR: Molybdenum cofactor biosynthesis protein A%3B~TIGRFAM: Molybdenum cofactor biosynthesis protein A~IMG reference gene:2504784359~PFAM: Molybdenum Cofactor Synthesis C%3B Radical SAM superfamily~TIGRFAM: molybdenum cofactor biosynthesis protein A%2C bacterial gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0962 Thena_0963 Thena_0963 Thena_0963 960988 962892 - molybdenum cofactor synthesis domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR020817:IPR005110:IPR001453:IPR005111~KEGG: molybdenum cofactor synthesis domain-containing protein~PFAM: Molybdopterin binding%3B MoeA%2C N-terminal region%2C domain I/II%3B MoeA%2C C-terminal%2C domain IV~SPTR: Molybdenum cofactor synthesis domain protein%3B~TIGRFAM: Molybdenum cofactor synthesis~IMG reference gene:2504784360~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II)%3B MoeA C-terminal region (domain IV)~TIGRFAM: molybdenum cofactor synthesis domain gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0963 Thena_0964 Thena_0964 Thena_0964 962946 964148 - molybdenum cofactor synthesis domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR020817:IPR005110:IPR001453:IPR005111~KEGG: pab:PAB1436 molybdenum cofactor biosynthesis protein~PFAM: MoeA%2C N-terminal region%2C domain I/II%3B Molybdopterin binding%3B MoeA%2C C-terminal%2C domain IV~SPTR: MoeA-1 molybdenum cofactor biosynthesis protein%3B~TIGRFAM: Molybdenum cofactor synthesis~IMG reference gene:2504784361~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II)~TIGRFAM: molybdenum cofactor synthesis domain gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0964 Thena_0965 Thena_0965 Thena_0965 964181 964795 - beta-lactamase domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: cst:CLOST_1303 beta-lactamase domain protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784362~PFAM: Metallo-beta-lactamase superfamily gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0965 Thena_0966 Thena_0966 Thena_0966 964815 965540 - Ribonuclease PH COGs: COG0689 RNase PH~HAMAP: Ribonuclease phosphorolytic%2C bacterial-type~InterPro IPR002381:IPR001247:IPR015847~KEGG: ddf:DEFDS_0446 tRNA nucleotidyltransferase~PFAM: Exoribonuclease%2C phosphorolytic domain 1%3B Exoribonuclease%2C phosphorolytic domain 2~PRIAM: tRNA nucleotidyltransferase~SPTR: Ribonuclease PH%3B~TIGRFAM: Ribonuclease phosphorolytic%2C bacterial-type~manually curated~IMG reference gene:2504784363~PFAM: 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2~TIGRFAM: ribonuclease PH gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0966 Thena_0967 Thena_0967 Thena_0967 965563 966459 - Tyrosine recombinase xerC COGs: COG4974 Site-specific recombinase XerD~HAMAP: Tyrosine recombinase xerC~InterPro IPR004107:IPR002104~KEGG: dth:DICTH_1414 recombinase~PFAM: Integrase%2C catalytic core%2C phage%3B Integrase%2C N-terminal SAM-like%2C phage~SPTR: Integrase family protein%3B~IMG reference gene:2504784364~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0967 Thena_0968 Thena_0968 Thena_0968 966446 967786 - Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation~HAMAP:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferasetrmFO~InterPro IPR004417:IPR002218~KEGG: dth:DICTH_1415 gid protein~PFAM: Glucose-inhibited division protein A-related~PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing)~SPTR:Methylenetetrahydrofolate--tRNA-(uracil-5-)-me thyltransferaseTrmFO%3B~TIGRFAM:Methylenetetrahydrofolate--tRNA-(uracil-5-) -methyltransferase%2CTrmFO~IMG reference gene:2504784365~PFAM: Glucose inhibited division protein A~TIGRFAM: tRNA:m(5)U-54 methyltransferase gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0968 Thena_0969 Thena_0969 Thena_0969 967790 969970 - DNA topoisomerase I COGs: COG0550 Topoisomerase IA~InterProIPR005733:IPR006154:IPR003601:IPR003602:IPR 006171:IPR013497:IPR013498~KEGG: has:Halsa_1348 DNA topoisomerase I~PFAM: DNA topoisomerase%2C type IA%2C central%3B Toprim domain%3B DNA topoisomerase%2C type IA%2C zn finger~PRIAM: DNA topoisomerase~SMART: DNA topoisomerase%2C type IA%2C DNA-binding%3B DNA topoisomerase%2C type IA%2C domain 2%3B Toprim domain%2C subgroup~SPTR: DNA topoisomerase I%3B~TIGRFAM: DNA topoisomerase I%2C bacterial-type~IMG reference gene:2504784366~PFAM: Toprim domain%3B Topoisomerase DNA binding C4 zinc finger%3B DNA topoisomerase~TIGRFAM: DNA topoisomerase I%2C bacterial gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0969 Thena_0970 Thena_0970 Thena_0970 969970 970998 - hypothetical protein IMG reference gene:2504784367 gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0970 Thena_0971 Thena_0971 Thena_0971 970970 971863 - porphobilinogen deaminase COGs: COG0181 Porphobilinogen deaminase~InterPro IPR000860~KEGG: ddf:DEFDS_0810 porphobilinogen deaminase~PFAM: Tetrapyrrole biosynthesis%2C hydroxymethylbilane synthase~SPTR: Porphobilinogen deaminase%3B~TIGRFAM: Tetrapyrrole biosynthesis%2C hydroxymethylbilane synthase~IMG reference gene:2504784368~PFAM: Porphobilinogen deaminase%2C dipyromethane cofactor binding domain~TIGRFAM: porphobilinogen deaminase gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0971 Thena_0972 Thena_0972 Thena_0972 971876 972688 - cytochrome c assembly protein InterPro IPR002541~KEGG: cni:Calni_1983 cytochrome c assembly protein~PFAM: Cytochrome c assembly protein~SPTR: Cytochrome c assembly protein%3B~IMG reference gene:2504784369~PFAM: Cytochrome C assembly protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0972 Thena_0973 Thena_0973 Thena_0973 972685 973980 - Glutamyl-tRNA reductase COGs: COG0373 Glutamyl-tRNA reductase~HAMAP: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase~InterPro IPR000343:IPR015895:IPR006151:IPR015896~KEGG: aar:Acear_0541 glutamyl-tRNA reductase~PFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase%2C N-terminal%3B Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase%3B Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase%2C C-terminal~SPTR: Glutamyl-tRNA reductase%3B~TIGRFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase~IMG reference gene:2504784370~PFAM: Shikimate / quinate 5-dehydrogenase%3B Glutamyl-tRNAGlu reductase%2C N-terminal domain%3B Glutamyl-tRNAGlu reductase%2C dimerisation domain~TIGRFAM: glutamyl-tRNA reductase gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0973 Thena_0974 Thena_0974 Thena_0974 973971 974591 - siroheme synthase COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)~InterPro IPR006367~KEGG: tmt:Tmath_0434 siroheme synthase~SPTR: Siroheme synthase%3B~TIGRFAM: Sirohaem synthase%2C N-terminal~IMG reference gene:2504784371~TIGRFAM: siroheme synthase%2C N-terminal domain gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0974 Thena_0975 Thena_0975 Thena_0975 974598 975275 - hypothetical protein IMG reference gene:2504784372 gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0975 Thena_0976 Thena_0976 Thena_0976 975299 976228 - Ornithine carbamoyltransferase COGs: COG0078 Ornithine carbamoyltransferase~HAMAP: Ornithine carbamoyltransferase~InterPro IPR002292:IPR006132:IPR006131~KEGG: cow:Calow_1320 ornithine carbamoyltransferase~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn-binding region~PRIAM: Ornithine carbamoyltransferase~SPTR: Ornithine carbamoyltransferase%3B~TIGRFAM: Ornithine carbamoyltransferase~IMG reference gene:2504784373~PFAM: Aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B Aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain~TIGRFAM: ornithine carbamoyltransferase gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0976 Thena_0977 Thena_0977 Thena_0977 976225 976602 - 6-pyruvoyl tetrahydropterin synthase and hypothetical protein COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase~InterPro IPR007115~KEGG: aba:Acid345_4642 putative 6-pyruvoyl tetrahydropterin synthase~PFAM: 6-pyruvoyl tetrahydropterin synthase-related~SPTR: PreQ(0) biosynthesis protein QueD%3B~IMG reference gene:2504784374~PFAM: 6-pyruvoyl tetrahydropterin synthase~TIGRFAM: queuosine biosynthesis protein QueD%3B 6-pyruvoyl tetrahydropterin synthase/QueD family protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0977 Thena_0978 Thena_0978 Thena_0978 976664 979876 - glucose-inhibited division protein A COGs: COG1520 FOG: WD40-like repeat~InterPro IPR018391:IPR002372:IPR002218~KEGG: pjd:Pjdr2_5069 putative protein involved in invasion~PFAM: Glucose-inhibited division protein A-related%3B Pyrrolo-quinoline quinone repeat~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784375~PFAM: PQQ enzyme repeat%3B Thi4 family gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0978 Thena_0979 Thena_0979 Thena_0979 979873 980913 - DNA protecting protein DprA COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake~InterPro IPR003488~KEGG: cth:Cthe_0459 DNA protecting protein DprA~PFAM: DNA recombination-mediator protein A~SPTR: Topoisomerase%3B~TIGRFAM: DNA recombination-mediator protein A~IMG reference gene:2504784376~PFAM: DNA recombination-mediator protein A~TIGRFAM: DNA protecting protein DprA gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0979 Thena_0980 Thena_0980 Thena_0980 980906 982432 - Mg chelatase%2C subunit ChlI COGs: COG0606 ATPase with chaperone activity~InterPro IPR004482:IPR003593:IPR000523~KEGG: Mg chelatase subunit ChlI~PFAM: Magnesium chelatase%2C ChlI subunit~SMART: ATPase%2C AAA+ type%2C core~SPTR: Mg chelatase%2C subunit ChlI%3B~TIGRFAM: Mg chelatase-related protein~IMG reference gene:2504784377~PFAM: Magnesium chelatase%2C subunit ChlI~TIGRFAM: Mg chelatase-related protein gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0980 Thena_0981 Thena_0981 Thena_0981 982429 982782 - UPF0102 protein yraN COGs: COG0792 endonuclease distantly related to Holliday junction resolvase~HAMAP: Uncharacterised protein family UPF0102~InterPro IPR003509~KEGG: fma:FMG_0533 putative endonuclease~PFAM: Uncharacterised protein family UPF0102~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784378~PFAM: Uncharacterised protein family UPF0102 gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0981 Thena_0982 Thena_0982 Thena_0982 982775 983407 - Ribonuclease H COGs: COG0164 Ribonuclease HII~InterPro IPR001352~KEGG: hap:HAPS_1756 ribonuclease HII~PFAM: Ribonuclease HII/HIII~PRIAM: Ribonuclease H~SPTR: Ribonuclease HII%3B~IMG reference gene:2504784379~PFAM: Ribonuclease HII gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0982 Thena_0983 Thena_0983 Thena_0983 983359 983874 - signal peptidase I COGs: COG0681 Signal peptidase I~InterPro IPR000223:IPR019759~KEGG: aar:Acear_1662 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region~PRIAM: Signal peptidase I~SPTR: Signal peptidase I%3B~TIGRFAM: Peptidase S26A%2C signal peptidase I~IMG reference gene:2504784380~PFAM: Peptidase S24-like~TIGRFAM: signal peptidase I%2C bacterial type gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0983 Thena_0984 Thena_0984 Thena_0984 983884 984234 - 50S ribosomal protein L19 COGs: COG0335 Ribosomal protein L19~HAMAP: Ribosomal protein L19~InterPro IPR001857~KEGG: ere:EUBREC_1510 50S ribosomal protein L19~PFAM: Ribosomal protein L19~SPTR: 50S ribosomal protein L19%3B~TIGRFAM: Ribosomal protein L19~IMG reference gene:2504784381~PFAM: Ribosomal protein L19~TIGRFAM: ribosomal protein L19%2C bacterial type gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0984 Thena_0985 Thena_0985 Thena_0985 984237 984998 - tRNA (guanine-N(1)-)-methyltransferase COGs: COG0336 tRNA-(guanine-N1)-methyltransferase~HAMAP: tRNA (guanine-N1-)-methyltransferase%2C bacteria~InterPro IPR002649:IPR016009~KEGG: swo:Swol_1493 tRNA (guanine-N(1)-)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase~PRIAM: tRNA (guanine-N(1)-)-methyltransferase~SPTR: tRNA (guanine-N(1)-)-methyltransferase%3B~TIGRFAM: tRNA (guanine-N1-)-methyltransferase%2C bacteria~IMG reference gene:2504784382~PFAM: tRNA (Guanine-1)-methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0985 Thena_0986 Thena_0986 Thena_0986 985007 985252 - RNA-binding protein (KH domain) COGs: COG1837 RNA-binding protein (contains KH domain)~KEGG: RNA-binding protein (KH domain)~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784383~PFAM: KH domain gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0986 Thena_0987 Thena_0987 Thena_0987 985255 985500 - 30S ribosomal protein S16 COGs: COG0228 Ribosomal protein S16~HAMAP: Ribosomal protein S16~InterPro IPR000307~KEGG: tte:TTE1461 30S ribosomal protein S16~PFAM: Ribosomal protein S16~SPTR: 30S ribosomal protein S16%3B~TIGRFAM: Ribosomal protein S16~IMG reference gene:2504784384~PFAM: Ribosomal protein S16~TIGRFAM: ribosomal protein S16 gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0987 Thena_0988 Thena_0988 Thena_0988 985532 986845 - GTP-binding signal recognition particle SRP54 G- domain protein COGs: COG0541 Signal recognition particle GTPase~InterPro IPR003593:IPR013822:IPR000897:IPR004125~KEGG: chy:CHY_1434 signal recognition particle protein~PFAM: Signal recognition particle%2C SRP54 subunit%2C GTPase%3B Signal recognition particle%2C SRP54 subunit%2C helical bundle%3B Signal recognition particle%2C SRP54 subunit%2C M-domain~SMART: ATPase%2C AAA+ type%2C core~SPTR: Signal recognition particle protein%3B~IMG reference gene:2504784385~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain%3B Signal peptide binding domain~TIGRFAM: signal recognition particle protein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0988 Thena_0989 Thena_0989 Thena_0989 986847 987722 - signal recognition particle-docking protein FtsY COGs: COG0552 Signal recognition particle GTPase~InterPro IPR004390:IPR003593:IPR000897~KEGG: dhd:Dhaf_3767 signal recognition particle-docking protein FtsY~PFAM: Signal recognition particle%2C SRP54 subunit%2C GTPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Signal recognition particle-docking protein FtsY%3B~TIGRFAM: Cell division transporter substrate-binding protein FtsY~IMG reference gene:2504784386~PFAM: SRP54-type protein%2C GTPase domain~TIGRFAM: signal recognition particle-docking protein FtsY gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0989 Thena_0990 Thena_0990 Thena_0990 987948 988160 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: mmq:MmarC5_1578 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: CoB--CoM heterodisulfide reductase iron-sulfur subunit A%2C selenocysteine-containing%3B~IMG reference gene:2504784387~PFAM: 4Fe-4S binding domain gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0990 Thena_0991 Thena_0991 Thena_0991 988186 988368 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: mae:Maeo_0794 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504784388~PFAM: 4Fe-4S binding domain gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0991 Thena_0992 Thena_0992 Thena_0992 988439 991618 + SMC domain protein COGs: COG1196 Chromosome segregation ATPase~InterPro IPR003395:IPR010935~KEGG: cdf:CD1250 chromosome partition protein~PFAM: RecF/RecN/SMC protein%2C N-terminal%3B SMCs flexible hinge~SPTR: Chromosome segregation protein Smc%3B~manually curated~IMG reference gene:2504784389~PFAM: RecF/RecN/SMC N terminal domain%3B SMC proteins Flexible Hinge Domain gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0992 Thena_0993 Thena_0993 Thena_0993 991624 992454 + Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: smc:SmuNN2025_1395 putative farnesyl diphosphate synthase~PFAM: Polyprenyl synthetase~SPTR: Putative farnesyl diphosphate synthase%3B~manually curated~IMG reference gene:2504784390~PFAM: Polyprenyl synthetase gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0993 Thena_0994 Thena_0994 Thena_0994 992447 992887 + acid phosphatase/vanadium-dependent haloperoxidase related protein COGs: COG1963 conserved hypothetical protein~InterPro IPR003832~KEGG: tel:tll0019 hypothetical protein~PFAM: Acid phosphatase/vanadium-dependent haloperoxidase related~SPTR: Tll0019 protein%3B~IMG reference gene:2504784391~PFAM: Divergent PAP2 family gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0994 Thena_0995 Thena_0995 Thena_0995 992922 994823 + 1-deoxy-D-xylulose-5-phosphate synthase COGs: COG1154 Deoxyxylulose-5-phosphate synthase~HAMAP: Deoxyxylulose-5-phosphate synthase~InterPro IPR005477:IPR005475:IPR005476~KEGG: ddf:DEFDS_0944 1-deoxy-D-xylulose-5-phosphate synthase~PFAM: Transketolase-like%2C pyrimidine-binding domain%3B Transketolase%2C C-terminal~PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase~SPTR: 1-deoxy-D-xylulose-5-phosphate synthase%3B~TIGRFAM: Deoxyxylulose-5-phosphate synthase~IMG reference gene:2504784392~PFAM: Transketolase%2C C-terminal domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain%3B Transketolase%2C pyrimidine binding domain~TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0995 Thena_0996 Thena_0996 Thena_0996 994839 995636 + inorganic polyphosphate/ATP-NAD kinase COGs: COG0061 sugar kinase~HAMAP: inorganic polyphosphate/ATP-NAD kinase~InterPro IPR002504~KEGG: cla:Cla_0650 conserved hypothetical protein%2C putative inorganic polyphosphate/ATP-NAD kinase~PFAM: ATP-NAD/AcoX kinase~PRIAM: NAD(+) kinase~SPTR: Probable inorganic polyphosphate/ATP-NAD kinase%3B~IMG reference gene:2504784393~PFAM: ATP-NAD kinase gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0996 Thena_0997 Thena_0997 Thena_0997 995670 997355 + SMC domain protein COGs: COG0497 ATPase involved in DNA repair~InterPro IPR003395~KEGG: dth:DICTH_0905 DNA repair protein RecN~PFAM: RecF/RecN/SMC protein%2C N-terminal~SPTR: DNA repair protein RecN%3B~IMG reference gene:2504784394~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: DNA repair protein RecN gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0997 Thena_0998 Thena_0998 Thena_0998 997352 998119 + Multi-copper polyphenol oxidoreductase%2C laccase COGs: COG1496 conserved hypothetical protein~InterPro IPR003730~KEGG: sse:Ssed_3498 hypothetical protein~PFAM: Multi-copper polyphenol oxidoreductase%2C laccase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Multi-copper polyphenol oxidoreductase%2C laccase~IMG reference gene:2504784395~PFAM: Multi-copper polyphenol oxidoreductase laccase~TIGRFAM: uncharacterized protein%2C YfiH family gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0998 Thena_0999 Thena_0999 Thena_0999 998128 999393 - homoserine dehydrogenase COGs: COG0460 Homoserine dehydrogenase~InterPro IPR005106:IPR001342:IPR002912~KEGG: aar:Acear_1069 homoserine dehydrogenase~PFAM: Homoserine dehydrogenase%2C catalytic%3B Aspartate/homoserine dehydrogenase%2C NAD-binding%3B Amino acid-binding ACT~SPTR: Homoserine dehydrogenase%3B~IMG reference gene:2504784396~PFAM: Homoserine dehydrogenase%3B Homoserine dehydrogenase%2C NAD binding domain%3B ACT domain gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_0999 Thena_1000 Thena_1000 Thena_1000 999414 1001072 - NAD+ synthetase COGs: COG0171 NAD synthase~InterPro IPR003694:IPR003010~KEGG: mtp:Mthe_0727 NAD+ synthetase~PFAM: NAD+ synthase%3B Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PRIAM: NAD(+) synthase (glutamine-hydrolyzing)~SPTR: NH(3)-dependent NAD(+) synthetase%3B~TIGRFAM: NAD+ synthase~IMG reference gene:2504784397~PFAM: NAD synthase%3B Carbon-nitrogen hydrolase~TIGRFAM: NAD+ synthetase gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1000 Thena_1001 Thena_1001 Thena_1001 1001150 1002268 - riboflavin biosynthesis protein RibD COGs: COG0117 Pyrimidine deaminase~InterPro IPR004794:IPR011549:IPR002125:IPR002734~KEGG: thx:Thet_0021 riboflavin biosynthesis protein RibD~PFAM: Bacterial bifunctional deaminase-reductase%2C C-terminal%3B CMP/dCMP deaminase%2C zinc-binding~PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase.%2C 5-amino-6-(5-phosphoribosylamino)uracil reductase~SPTR: Riboflavin biosynthesis protein RibD%3B~TIGRFAM: Riboflavin biosynthesis protein RibD%3B Riboflavin-specific deaminase%2C C-terminal~IMG reference gene:2504784398~PFAM: RibD C-terminal domain%3B Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: riboflavin-specific deaminase C-terminal domain%3B riboflavin biosynthesis protein RibD gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1001 Thena_1002 Thena_1002 Thena_1002 1002319 1003380 - Ribosomal RNA large subunit methyltransferase N COGs: COG0820 Fe-S-cluster redox enzyme~HAMAP: Ribosomal RNA large subunit methyltransferase RlmN%3B~InterPro IPR004383:IPR007197~KEGG: dtu:Dtur_1436 radical SAM enzyme%2C Cfr family~PFAM: Radical SAM~SPTR: Ribosomal RNA large subunit methyltransferase N%3B~TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN%3B~IMG reference gene:2504784399~PFAM: Radical SAM superfamily~TIGRFAM: 23S rRNA m2A2503 methyltransferase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1002 Thena_1003 Thena_1003 Thena_1003 1003373 1004635 - Fmu (Sun) domain protein COGs: COG0144 tRNA and rRNA cytosine-C5-methylase~InterPro IPR001678~KEGG: tit:Thit_1309 sun protein~PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p~SPTR: Sun protein%3B~IMG reference gene:2504784400~PFAM: NOL1/NOP2/sun family%3B NusB family gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1003 Thena_1004 Thena_1004 Thena_1004 1004639 1005556 - Methionyl-tRNA formyltransferase COGs: COG0223 Methionyl-tRNA formyltransferase~HAMAP: Methionyl-tRNA formyltransferase~InterPro IPR005794:IPR002376:IPR005793~KEGG: pmx:PERMA_0584 methionyl-tRNA formyltransferase~PFAM: Formyl transferase%2C N-terminal%3B Formyl transferase%2C C-terminal~PRIAM: Methionyl-tRNA formyltransferase~SPTR: Methionyl-tRNA formyltransferase%3B~TIGRFAM: Methionyl-tRNA formyltransferase~IMG reference gene:2504784401~PFAM: Formyl transferase%3B Formyl transferase%2C C-terminal domain~TIGRFAM: methionyl-tRNA formyltransferase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1004 Thena_1005 Thena_1005 Thena_1005 1005585 1006082 - Peptide deformylase COGs: COG0242 N-formylmethionyl-tRNA deformylase~HAMAP: Formylmethionine deformylase~InterPro IPR000181~KEGG: slp:Slip_0859 peptide deformylase~PFAM: Formylmethionine deformylase~PRIAM: Peptide deformylase~SPTR: Peptide deformylase%3B~TIGRFAM: Formylmethionine deformylase~IMG reference gene:2504784402~PFAM: Polypeptide deformylase~TIGRFAM: peptide deformylase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1005 Thena_1006 Thena_1006 Thena_1006 1006179 1007117 - protein of unknown function DUF1722 COGs: COG3272 conserved hypothetical protein~InterPro IPR007553:IPR013560~KEGG: dtu:Dtur_1655 protein of unknown function DUF1722~PFAM: Protein of unknown function DUF1722%3B Protein of unknown function DUF523~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784403~PFAM: Protein of unknown function (DUF523)%3B Protein of unknown function (DUF1722) gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1006 Thena_1007 Thena_1007 Thena_1007 1007145 1008350 - Methyltransferase type 11 InterPro IPR013216~KEGG: dal:Dalk_3488 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: Methyltransferase type 11%3B~IMG reference gene:2504784404~PFAM: Methyltransferase domain gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1007 Thena_1008 Thena_1008 Thena_1008 1008408 1009739 - DNA photolyase FAD-binding protein COGs: COG0415 Deoxyribodipyrimidine photolyase~InterPro IPR005101~KEGG: cni:Calni_0037 deoxyribodipyrimidine photo-lyase~PFAM: DNA photolyase%2C FAD-binding/Cryptochrome%2C C-terminal~SPTR: Deoxyribodipyrimidine photo-lyase%3B~IMG reference gene:2504784405~PFAM: FAD binding domain of DNA photolyase%3B DNA photolyase~TIGRFAM: photolyase PhrII gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1008 Thena_1009 Thena_1009 Thena_1009 1009819 1010382 + protein of unknown function DUF996 COGs: COG2245 membrane protein~InterPro IPR010397~KEGG: hya:HY04AAS1_1624 protein of unknown function DUF996~PFAM: Protein of unknown function DUF996~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784406~PFAM: Protein of unknown function (DUF996) gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1009 Thena_1010 Thena_1010 Thena_1010 1010521 1012020 + drug resistance transporter%2C EmrB/QacA subfamily COGs: COG2814 Arabinose efflux permease~InterPro IPR004638:IPR011701~KEGG: bts:Btus_0398 drug resistance transporter%2C EmrB/QacA subfamily~PFAM: Major facilitator superfamily MFS-1~SPTR: Drug resistance transporter%2C EmrB/QacA subfamily%3B~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~IMG reference gene:2504784407~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1010 Thena_1011 Thena_1011 Thena_1011 1012053 1013699 - Formate--tetrahydrofolate ligase COGs: COG2759 Formyltetrahydrofolate synthetase~HAMAP: Formate-tetrahydrofolate ligase%2C FTHFS~InterPro IPR000559~KEGG: aco:Amico_1546 formate--tetrahydrofolate ligase~PFAM: Formate-tetrahydrofolate ligase%2C FTHFS~PRIAM: Formate--tetrahydrofolate ligase~SPTR: Formate--tetrahydrofolate ligase 2%3B~IMG reference gene:2504784408~PFAM: Formate--tetrahydrofolate ligase gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1011 Thena_1012 Thena_1012 Thena_1012 1013867 1014439 - hypothetical protein IMG reference gene:2504784409 gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1012 Thena_1013 Thena_1013 Thena_1013 1014573 1014779 - hypothetical protein IMG reference gene:2504784410 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1013 Thena_1014 Thena_1014 Thena_1014 1015017 1015427 - phenylacetic acid degradation-related protein COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism~InterPro IPR003736:IPR006683~KEGG: afu:AF2264 hypothetical protein~PFAM: Thioesterase superfamily~SPTR: Putative esterase AF_2264%3B~TIGRFAM: Phenylacetic acid degradation-related protein~IMG reference gene:2504784411~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1%3B phenylacetic acid degradation protein PaaD gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1014 Thena_1015 Thena_1015 Thena_1015 1015476 1017437 - Acetate--CoA ligase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR000873~KEGG: tvo:TVN1266 acyl-coenzyme A synthetase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Acetate--CoA ligase~SPTR: AMP-dependent synthetase and ligase%3B~IMG reference gene:2504784412~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetate--CoA ligase gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1015 Thena_1016 Thena_1016 Thena_1016 1017572 1018051 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG1225 Peroxiredoxin~InterPro IPR000866~KEGG: pmx:PERMA_0365 bacterioferritin comigratory protein BCP~PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Bacterioferritin comigratory protein BCP%3B~IMG reference gene:2504784413~PFAM: AhpC/TSA family gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1016 Thena_1017 Thena_1017 Thena_1017 1018166 1019176 - hypothetical protein COGs: COG4642 conserved hypothetical protein~InterPro IPR003409~KEGG: tet:TTHERM_00077350 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784414~PFAM: MORN repeat gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1017 Thena_1018 Thena_1018 Thena_1018 1019239 1022088 - hypothetical protein KEGG: tye:THEYE_A1135 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784415 gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1018 Thena_1019 Thena_1019 Thena_1019 1022081 1025203 - UvrD/REP helicase COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)~InterPro IPR000212~KEGG: tye:THEYE_A1137 UvrD/REP helicase domain protein%2C putative~PFAM: DNA helicase%2C UvrD/REP type~SPTR: UvrD/REP helicase domain protein%2C putative%3B~IMG reference gene:2504784416~PFAM: UvrD/REP helicase gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1019 Thena_1020 Thena_1020 Thena_1020 1025229 1026323 - branched-chain amino acid aminotransferase COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR005786:IPR001544~KEGG: cni:Calni_0961 branched chain amino acid aminotransferase apoenzyme~PFAM: Aminotransferase%2C class IV~PRIAM: Branched-chain-amino-acid transaminase~SPTR: Branched chain amino acid aminotransferase apoenzyme%3B~TIGRFAM: Branched-chain amino acid aminotransferase II~IMG reference gene:2504784417~PFAM: Aminotransferase class IV~TIGRFAM: branched-chain amino acid aminotransferase%2C group II gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1020 Thena_1021 Thena_1021 Thena_1021 1026352 1026720 - hypothetical protein KEGG: cpo:COPRO5265_1260 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784418 gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1021 Thena_1022 Thena_1022 Thena_1022 1026731 1027084 - hypothetical protein KEGG: hor:Hore_11120 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784419~PFAM: Coenzyme PQQ synthesis protein D (PqqD) gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1022 Thena_1023 Thena_1023 Thena_1023 1027088 1029004 - oligopeptide transporter%2C OPT family COGs: COG1297 membrane protein~InterPro IPR004813:IPR004814~KEGG: hor:Hore_11130 oligopeptide transporter%2C OPT family~PFAM: Oligopeptide transporter OPT superfamily~SPTR: Oligopeptide transporter%2C OPT family%3B~TIGRFAM: Oligopeptide transporter OPT%3B Oligopeptide transporter OPT superfamily~IMG reference gene:2504784420~PFAM: OPT oligopeptide transporter protein~TIGRFAM: putative oligopeptide transporter%2C OPT family%3B oligopeptide transporters%2C OPT superfamily gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1023 Thena_1024 Thena_1024 Thena_1024 1029063 1030445 - dipeptidase COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR010964:IPR002933:IPR011650~KEGG: cpr:CPR_1231 dipeptidase PepV~PFAM: Peptidase M20%3B Peptidase M20%2C dimerisation~SPTR: Putative dipeptidase%3B~TIGRFAM: Peptidase M20A%2C peptidase V related~IMG reference gene:2504784421~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: dipeptidase%2C putative gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1024 Thena_1025 Thena_1025 Thena_1025 1030523 1031770 - Glutamate dehydrogenase (NAD(P)(+)) COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase~InterPro IPR006097:IPR006096~KEGG: dae:Dtox_3997 Glu/Leu/Phe/Val dehydrogenase~PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase%2C C-terminal%3B Glutamate/phenylalanine/leucine/valine dehydrogenase%2C dimerisation region~PRIAM: Glutamate dehydrogenase (NAD(P)(+))~SPTR: Glu/Leu/Phe/Val dehydrogenase%3B~IMG reference gene:2504784422~PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%3B Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1025 Thena_1026 Thena_1026 Thena_1026 1031980 1032612 + hypothetical protein KEGG: nth:Nther_2943 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784423 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1026 Thena_1027 Thena_1027 Thena_1027 1032649 1033401 + 5-carboxymethyl-2-hydroxymuconateDelta-isomerase COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway)~InterPro IPR002529~KEGG: pmo:Pmob_0980 5-carboxymethyl-2-hydroxymuconate delta-isomerase~PFAM: Fumarylacetoacetase%2C C-terminal-like~PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase~SPTR: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase%3B~IMG reference gene:2504784424~PFAM: Domain of unknown function (DUF2437)%3B Fumarylacetoacetate (FAA) hydrolase family gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1027 Thena_1028 Thena_1028 Thena_1028 1033433 1034455 + Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR019734:IPR001440:IPR011716~KEGG: cyp:PCC8801_1300 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR-1%3B Tetratricopeptide TPR-3~SMART: Tetratricopeptide repeat~SPTR: TPR repeat-containing protein%3B~IMG reference gene:2504784425~PFAM: Tetratricopeptide repeat gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1028 Thena_1029 Thena_1029 Thena_1029 1034457 1035125 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 COGs: COG0546 phosphatase~InterPro IPR006439:IPR005834~KEGG: dal:Dalk_1233 HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~PFAM: Haloacid dehalogenase-like hydrolase~PRIAM: Phosphoglycolate phosphatase~SPTR: Similar to phosphoglycolate phosphatase %3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~IMG reference gene:2504784426~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1029 Thena_1030 Thena_1030 Thena_1030 1035118 1036308 + metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006675:IPR003607:IPR006674~KEGG: metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: HDIG~IMG reference gene:2504784427~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1030 Thena_1031 Thena_1031 Thena_1031 1036305 1037264 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR010066:IPR003593:IPR003439:IPR013563~KEGG: tle:Tlet_0198 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like%3B Oligopeptide/dipeptide ABC transporter%2C C-terminal~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: Oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal~IMG reference gene:2504784428~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1031 Thena_1032 Thena_1032 Thena_1032 1037264 1038241 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR010066:IPR003593:IPR003439:IPR013563~KEGG: trq:TRQ2_0437 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like%3B Oligopeptide/dipeptide ABC transporter%2C C-terminal~PRIAM: Nickel-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: Oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal~IMG reference gene:2504784429~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1032 Thena_1033 Thena_1033 Thena_1033 1038256 1038765 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: tjr:TherJR_1090 nitroreductase~PFAM: Nitroreductase-like~SPTR: Nitroreductase%3B~IMG reference gene:2504784430~PFAM: Nitroreductase family gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1033 Thena_1034 Thena_1034 Thena_1034 1038793 1040562 - ADP-ribosylation/Crystallin J1 COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family~InterPro IPR000760:IPR005502~KEGG: cyn:Cyan7425_5360 ADP-ribosylation/crystallin J1~PFAM: ADP-ribosylation/Crystallin J1%3B Inositol monophosphatase~SPTR: ADP-ribosylation/Crystallin J1%3B~IMG reference gene:2504784431~PFAM: ADP-ribosylglycohydrolase%3B Inositol monophosphatase family gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1034 Thena_1035 Thena_1035 Thena_1035 1040584 1040805 - hypothetical protein KEGG: lbf:LBF_0824 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784432~PFAM: Protein of unknown function (DUF2892) gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1035 Thena_1036 Thena_1036 Thena_1036 1040813 1044052 - acriflavin resistance protein COGs: COG0841 Cation/multidrug efflux pump~InterPro IPR001036~KEGG: gur:Gura_4228 acriflavin resistance protein~PFAM: Acriflavin resistance protein~SPTR: Acriflavin resistance protein%3B~IMG reference gene:2504784433~PFAM: AcrB/AcrD/AcrF family gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1036 Thena_1037 Thena_1037 Thena_1037 1044063 1045145 - efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR006143~KEGG: gur:Gura_4229 RND family efflux transporter MFP subunit~PFAM: Secretion protein HlyD~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: Secretion protein HlyD~IMG reference gene:2504784434~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1037 Thena_1038 Thena_1038 Thena_1038 1045167 1046501 - outer membrane efflux protein COGs: COG1538 Outer membrane protein~InterPro IPR003423~KEGG: geo:Geob_0476 outer membrane efflux protein~PFAM: Outer membrane efflux protein~SPTR: Outer membrane efflux protein%3B~IMG reference gene:2504784435~PFAM: Outer membrane efflux protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1038 Thena_1039 Thena_1039 Thena_1039 1046770 1047240 + NADH dehydrogenase (ubiquinone) 24 kDa subunit COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023~KEGG: ssm:Spirs_3691 NADH-quinone oxidoreductase%2C E subunit~PFAM: NADH:ubiquinone oxidoreductase%2C 24kDa subunit~SPTR: NADH-quinone oxidoreductase%2C E subunit%3B~IMG reference gene:2504784436~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1039 Thena_1040 Thena_1040 Thena_1040 1047279 1047614 + NADP-reducing hydrogenase%2C subunit B KEGG: dth:DICTH_0768 NADP-reducing hydrogenase%2C subunit B~SPTR: NADP-reducing hydrogenase%2C subunit b%3B~IMG reference gene:2504784437 gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1040 Thena_1041 Thena_1041 Thena_1041 1047650 1049263 + NADH dehydrogenase (quinone) COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterPro IPR011538:IPR019554:IPR019575~KEGG: dth:DICTH_0769 NADH:ubiquinone oxidoreductase%2C nadh-binding (51 kd) subunit~PFAM: NADH:ubiquinone oxidoreductase%2C 51kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH:ubiquinone oxidoreductase%2C nadh-binding (51 kd) subunit%3B~IMG reference gene:2504784438~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B Respiratory-chain NADH dehydrogenase 24 Kd subunit%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1041 Thena_1042 Thena_1042 Thena_1042 1049292 1052027 + formate dehydrogenase%2C alpha subunit COGs: COG3383 Uncharacterized anaerobic dehydrogenase~InterProIPR006478:IPR001041:IPR019574:IPR001450:IPR 006963:IPR006656:IPR006657~KEGG: pmo:Pmob_0386 formate dehydrogenase%2C alpha subunit~PFAM: Molybdopterin oxidoreductase%3B NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B Ferredoxin%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup%3B Molybdopterin oxidoreductase Fe4S4 region%3B Molydopterin dinucleotide-binding region~SPTR: Formate dehydrogenase%2C alpha subunit%3B~TIGRFAM: Formate dehydrogenase%2C alpha subunit~IMG reference gene:2504784439~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region%3B Molybdopterin oxidoreductase Fe4S4 domain~TIGRFAM: formate dehydrogenase%2C alpha subunit%2C archaeal-type gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1042 Thena_1043 Thena_1043 Thena_1043 1052081 1053319 - response regulator receiver modulated diguanylate cyclase COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain~InterPro IPR000160:IPR001789~KEGG: dma:DMR_04980 response regulator receiver protein~PFAM: Diguanylate cyclase%2C predicted%3B Signal transduction response regulator%2C receiver region~SMART: Diguanylate cyclase%2C predicted%3B Signal transduction response regulator%2C receiver region~SPTR: Response regulator receiver modulated diguanylate cyclase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~IMG reference gene:2504784440~PFAM: Response regulator receiver domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1043 Thena_1044 Thena_1044 Thena_1044 1053514 1054768 + pseudogene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1044 Thena_1045 Thena_1045 Thena_1045 1054911 1056245 - aminotransferase class I and II COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839~KEGG: cst:CLOST_1222 aminotransferase class I and II~PFAM: Aminotransferase%2C class I/II~SPTR: Aminotransferase class I and II%3B~IMG reference gene:2504784442~PFAM: Aminotransferase class I and II gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1045 Thena_1046 Thena_1046 Thena_1046 1056343 1057827 - hypothetical protein KEGG: cha:CHAB381_1536 hemagglutination activity domain-containing protein~SPTR: Haemagglutination activity domain protein%3B~IMG reference gene:2504784443 gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1046 Thena_1047 Thena_1047 Thena_1047 1057796 1058395 - hypothetical protein InterPro IPR012902~IMG reference gene:2504784444 gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1047 Thena_1048 Thena_1048 Thena_1048 1058370 1058693 - hypothetical protein IMG reference gene:2504784445 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1048 Thena_1049 Thena_1049 Thena_1049 1058894 1060174 + Xanthine/uracil/vitamin C permease COGs: COG2233 Xanthine/uracil permease~InterPro IPR006043~KEGG: dae:Dtox_0770 xanthine/uracil/vitamin C permease~PFAM: Xanthine/uracil/vitamin C permease~SPTR: Xanthine/uracil/vitamin C permease%3B~IMG reference gene:2504784447~PFAM: Permease family gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1049 Thena_1050 Thena_1050 Thena_1050 1060412 1061440 + cobalamin (vitamin B12) biosynthesis CbiM protein COGs: COG0310 ABC-type Co2+ transport system permease component~InterPro IPR002751~KEGG: mta:Moth_1863 cobalt transport protein CbiM~PFAM: Cobalamin (vitamin B12) biosynthesis CbiM~SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein%3B~IMG reference gene:2504784448~PFAM: Cobalt uptake substrate-specific transmembrane region~TIGRFAM: cobalamin biosynthesis protein CbiM gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1050 Thena_1051 Thena_1051 Thena_1051 1061458 1062372 + cobalt ABC transporter%2C inner membrane subunit CbiQ COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR012809:IPR003339~KEGG: mta:Moth_1862 cobalt ABC transporter CbiQ%2C permease subunit~PFAM: Cobalt transport protein~SPTR: Cobalt ABC transporter CbiQ%2C permease subunit%3B~TIGRFAM: Cobalt ABC transporter CbiQ%2C permease subunit~IMG reference gene:2504784449~PFAM: Cobalt transport protein~TIGRFAM: cobalt ABC transporter%2C permease protein CbiQ gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1051 Thena_1052 Thena_1052 Thena_1052 1062359 1063165 + Sulfate-transporting ATPase COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: mta:Moth_1861 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~IMG reference gene:2504784450~PFAM: ABC transporter gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1052 Thena_1053 Thena_1053 Thena_1053 1063310 1064038 + cytochrome b5 COGs: COG4892 heme/steroid binding protein~InterPro IPR001199~KEGG: sfu:Sfum_3227 cytochrome b5~PFAM: Cytochrome b5~SPTR: Cytochrome b5%3B~IMG reference gene:2504784451~PFAM: Cytochrome b5-like Heme/Steroid binding domain gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1053 Thena_1054 Thena_1054 Thena_1054 1064057 1064470 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~InterPro IPR001450~KEGG: tpe:Tpen_1816 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~IMG reference gene:2504784452 gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1054 Thena_1055 Thena_1055 Thena_1055 1064463 1066220 + Aldehyde ferredoxin oxidoreductase COGs: COG2414 Aldehyde:ferredoxin oxidoreductase~InterPro IPR013983:IPR001203~KEGG: kcr:Kcr_1084 aldehyde ferredoxin oxidoreductase~PFAM: Aldehyde ferredoxin oxidoreductase%2C N-terminal%3B Aldehyde ferredoxin oxidoreductase%2C C-terminal~PRIAM: Aldehyde ferredoxin oxidoreductase~SMART: Aldehyde ferredoxin oxidoreductase%2C N-terminal~SPTR: Aldehyde ferredoxin oxidoreductase%3B~IMG reference gene:2504784453~PFAM: Aldehyde ferredoxin oxidoreductase%2C N-terminal domain%3B Aldehyde ferredoxin oxidoreductase%2C domains 2 %26 3 gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1055 Thena_1056 Thena_1056 Thena_1056 1066454 1067577 + pseudogene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1056 Thena_1057 Thena_1057 Thena_1057 1067558 1068562 - hypothetical protein KEGG: ttm:Tthe_2498 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784455 gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1057 Thena_1058 Thena_1058 Thena_1058 1068573 1069625 - hypothetical protein COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase~KEGG: ttm:Tthe_2499 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784456~PFAM: Predicted periplasmic protein (DUF2233) gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1058 Thena_1059 Thena_1059 Thena_1059 1074937 1076304 + Integrase catalytic region InterPro IPR001584~KEGG: dau:Daud_1501 integrase catalytic subunit~PFAM: Integrase%2C catalytic core~SPTR: Integrase%2C catalytic region%3B~IMG reference gene:2504784462~PFAM: Integrase core domain gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1059 Thena_1060 Thena_1060 Thena_1060 1076491 1077348 - 2-hydroxy-3-oxopropionate reductase COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase~InterPro IPR006115~KEGG: rcu:RCOM_1211530 3-hydroxyisobutyrate dehydrogenase%2C putative~PFAM: 6-phosphogluconate dehydrogenase%2C NAD-binding~PRIAM: 2-hydroxy-3-oxopropionate reductase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784463~PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1060 Thena_1061 Thena_1061 Thena_1061 1077570 1078532 + respiratory-chain NADH dehydrogenase subunit 1 COGs: COG0650 Formate hydrogenlyase subunit 4~InterPro IPR001694~KEGG: abi:Aboo_0778 formate hydrogenlyase subunit 4 (HycD)~PFAM: NADH:ubiquinone oxidoreductase%2C subunit 1~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784464~PFAM: NADH dehydrogenase gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1061 Thena_1062 Thena_1062 Thena_1062 1078541 1079164 + hydrogenase 4 membrane component (E)-like protein COGs: COG4237 Hydrogenase 4 membrane component (E)~KEGG: abi:Aboo_0777 hydrogenase 4 membrane component (E)-like protein~SPTR: Hydrogenase 4 membrane component (E)-like protein%3B~IMG reference gene:2504784465 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1062 Thena_1063 Thena_1063 Thena_1063 1079161 1080537 + NADH dehydrogenase (quinone) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR001750~KEGG: tvo:TVN1455 hydrogenase 4 subunit F~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: Formate hydrogenlyase subunit 4%3B~IMG reference gene:2504784466~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1063 Thena_1064 Thena_1064 Thena_1064 1080534 1081769 + hypothetical protein COGs: COG3261 Ni Fe-hydrogenase III large subunit~KEGG: sin:YN1551_1656 formate hydrogenlyase subunit 5 (HycE)~SPTR: Formate hydrogenlyase subunit 5 (HycE)%3B~IMG reference gene:2504784467~PFAM: Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1064 Thena_1065 Thena_1065 Thena_1065 1081791 1082258 + NADH ubiquinone oxidoreductase 20 kDa subunit COGs: COG3260 Ni Fe-hydrogenase III small subunit~InterPro IPR006137~KEGG: abi:Aboo_0774 NADH ubiquinone oxidoreductase 20 kDa subunit~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~SPTR: NADH ubiquinone oxidoreductase%2C 20 Kd subunit family%3B~IMG reference gene:2504784468 gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1065 Thena_1066 Thena_1066 Thena_1066 1082255 1084132 + NADH/Ubiquinone/plastoquinone (complex I) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR001750~KEGG: abi:Aboo_0773 NADH/ubiquinone/plastoquinone (complex I)~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~SPTR: NADH-Ubiquinone/plastoquinone (Complex I)%2C domain protein%3B~IMG reference gene:2504784469~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1066 Thena_1067 Thena_1067 Thena_1067 1084573 1086738 + hypothetical protein manually curated~IMG reference gene:2504784470~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1067 Thena_1068 Thena_1068 Thena_1068 1086752 1087468 - protein of unknown function DUF81 InterPro IPR002781~KEGG: rfr:Rfer_1450 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784471~PFAM: Sulfite exporter TauE/SafE gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1068 Thena_1069 Thena_1069 Thena_1069 1087670 1088125 + putative transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterPro IPR019888:IPR001845~KEGG: gtn:GTNG_3286 transcriptional regulator~PFAM: HTH transcriptional regulator%2C ArsR~SMART: Transcription regulator%2C AsnC-type~SPTR: Transcriptional regulator%3B~IMG reference gene:2504784472~PFAM: MarR family gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1069 Thena_1070 Thena_1070 Thena_1070 1088122 1088746 - pseudogene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1070 Thena_1071 Thena_1071 Thena_1071 1088685 1088957 - hypothetical protein KEGG: taf:THA_599 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784474 gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1071 Thena_1072 Thena_1072 Thena_1072 1088983 1090098 - PDZ/DHR/GLGF domain protein InterPro IPR001478~KEGG: tai:Taci_1411 PDZ/DHR/GLGF domain protein~PFAM: PDZ/DHR/GLGF~SMART: PDZ/DHR/GLGF~SPTR: PDZ/DHR/GLGF domain protein%3B~IMG reference gene:2504784475~PFAM: PDZ domain (Also known as DHR or GLGF) gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1072 Thena_1073 Thena_1073 Thena_1073 1090261 1092429 - Lactate utilization protein B/C COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain~InterPro IPR003741:IPR001450:IPR004017~KEGG: hmo:HM1_0363 4fe-4S ferredoxin%2C iron-sulfur binding protein%2C putative~PFAM: Protein of unknown function DUF162%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup%3B Cysteine-rich region%2C CCG~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784476~PFAM: Cysteine-rich domain%3B Uncharacterised ACR%2C YkgG family COG1556~TIGRFAM: iron-sulfur cluster-binding protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1073 Thena_1074 Thena_1074 Thena_1074 1092429 1093010 - Lactate utilization protein B/C COGs: COG1556 conserved hypothetical protein~InterPro IPR003741~KEGG: drm:Dred_0689 hypothetical protein~PFAM: Protein of unknown function DUF162~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784477~PFAM: Uncharacterised ACR%2C YkgG family COG1556 gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1074 Thena_1075 Thena_1075 Thena_1075 1093156 1094640 + Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR017472:IPR017475:IPR003362~KEGG: hya:HY04AAS1_0831 undecaprenyl-phosphate galactose phosphotransferase%2C WbaP~PFAM: Bacterial sugar transferase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: Undecaprenyl-phosphate galactosephosphotransferase%3B~TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP%3B Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~IMG reference gene:2504784478~PFAM: Bacterial sugar transferase~TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase%3B Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1075 Thena_1076 Thena_1076 Thena_1076 1094726 1095286 + Abortive infection protein InterPro IPR003675~KEGG: gym:GYMC10_2169 abortive infection protein~PFAM: Abortive infection protein~SPTR: Abortive infection protein%3B~IMG reference gene:2504784479~PFAM: CAAX amino terminal protease family gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1076 Thena_1077 Thena_1077 Thena_1077 1095283 1096020 - Prepilin peptidase COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase~InterPro IPR010627:IPR000045~KEGG: chy:CHY_0634 type IV prepilin peptidase~PFAM: Peptidase A24A%2C N-terminal%3B Peptidase A24A%2C prepilin type IV~PRIAM: Prepilin peptidase~SPTR: Type IV prepilin peptidase%3B~IMG reference gene:2504784480~PFAM: Bacterial Peptidase A24 N-terminal domain%3B Type IV leader peptidase family gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1077 Thena_1078 Thena_1078 Thena_1078 1096142 1096732 + phospholipase D (PLD) family protein COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase~KEGG: adg:Adeg_0059 phospholipase D (PLD) family protein~SPTR: Phospholipase D (PLD) family protein%3B~IMG reference gene:2504784481 gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1078 Thena_1079 Thena_1079 Thena_1079 1096764 1097390 + hypothetical protein IMG reference gene:2504784482 gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1079 Thena_1080 Thena_1080 Thena_1080 1097432 1098121 - anaerobic ribonucleoside-triphosphate reductase activating protein COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR012840:IPR007197~KEGG: hor:Hore_11040 anaerobic ribonucleoside-triphosphate reductase activating protein~PFAM: Radical SAM~SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein%3B~TIGRFAM: Ribonucleoside-triphosphate reductase%2C anaerobic-like~IMG reference gene:2504784483~PFAM: Radical SAM superfamily~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1080 Thena_1081 Thena_1081 Thena_1081 1098124 1100400 - anaerobic ribonucleoside-triphosphate reductase COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase~InterPro IPR012833:IPR005144~KEGG: hya:HY04AAS1_1401 anaerobic ribonucleoside triphosphate reductase~PFAM: ATP-cone~PRIAM: Ribonucleoside-triphosphate reductase~SPTR: Anaerobic ribonucleoside-triphosphate reductase%3B~TIGRFAM: Ribonucleoside-triphosphate reductase%2C anaerobic~IMG reference gene:2504784484~PFAM: ATP cone domain~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1081 Thena_1082 Thena_1082 Thena_1082 1100679 1101848 + putative transcriptional regulator%2C GntR family COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs~InterPro IPR004839~KEGG: aminotransferase~PFAM: Aminotransferase%2C class I/II~SPTR: Putative transcriptional regulator%2C GntR family%3B~IMG reference gene:2504784485~PFAM: Aminotransferase class I and II gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1082 Thena_1083 Thena_1083 Thena_1083 1101929 1103119 - Acetylornithine/succinyldiaminopimelateaminotransferase COGs: COG4992 Ornithine/acetylornithine aminotransferase~HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase~InterPro IPR004636:IPR005814~KEGG: mfs:MFS40622_1451 acetylornithine and succinylornithine aminotransferase~PFAM: Aminotransferase class-III~PRIAM: Acetylornithine transaminase~SPTR: Acetylornithine and succinylornithine aminotransferase%3B~TIGRFAM: Acetylornithine/succinylornithine aminotransferase~IMG reference gene:2504784486~PFAM: Aminotransferase class-III~TIGRFAM: acetylornithine and succinylornithine aminotransferases gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1083 Thena_1084 Thena_1084 Thena_1084 1103259 1103528 + hydrogenase assembly chaperone hypC/hupF COGs: COG0298 Hydrogenase maturation factor~InterPro IPR001109~KEGG: dly:Dehly_1411 hydrogenase assembly chaperone HypC/HupF~PFAM: Hydrogenase expression/formation protein%2C HupF/HypC~SPTR: Hydrogenase assembly chaperone hypC/hupF%3B~TIGRFAM: Hydrogenase expression/formation protein%2C HupF/HypC~IMG reference gene:2504784487~PFAM: HupF/HypC family~TIGRFAM: hydrogenase assembly chaperone HypC/HupF gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1084 Thena_1085 Thena_1085 Thena_1085 1103515 1104594 + hydrogenase expression/formation protein HypD COGs: COG0409 Hydrogenase maturation factor~InterPro IPR002780~KEGG: dba:Dbac_0139 hydrogenase expression/formation protein HypD~PFAM: Hydrogenase formation HypD protein~SPTR: Hydrogenase formation HypD protein%3B~TIGRFAM: Hydrogenase formation HypD protein~IMG reference gene:2504784488~PFAM: Hydrogenase formation hypA family~TIGRFAM: hydrogenase expression/formation protein HypD gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1085 Thena_1086 Thena_1086 Thena_1086 1104638 1105648 + hydrogenase expression/formation protein HypE COGs: COG0309 Hydrogenase maturation factor~InterPro IPR011854:IPR000728:IPR010918~KEGG: chy:CHY_1537 hydrogenase expression/formation protein HypE~PFAM: AIR synthase related protein%2C C-terminal%3B AIR synthase related protein~SPTR: Hydrogenase expression/formation protein HypE%3B~TIGRFAM: Hydrogenase expression/formation protein HypE~IMG reference gene:2504784489~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: hydrogenase expression/formation protein HypE gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1086 Thena_1087 Thena_1087 Thena_1087 1105649 1106608 - succinyl-CoA synthetase%2C alpha subunit COGs: COG0074 Succinyl-CoA synthetase alpha subunit~InterPro IPR005810:IPR003781:IPR005811~KEGG: afw:Anae109_3723 succinyl-CoA synthetase%2C alpha subunit~PFAM: CoA-binding%3B ATP-citrate lyase/succinyl-CoA ligase~PRIAM: Succinate--CoA ligase (ADP-forming)~SPTR: Succinyl-CoA synthetase%2C alpha subunit%3B~TIGRFAM: Succinyl-CoA ligase%2C alpha subunit~IMG reference gene:2504784490~PFAM: CoA binding domain%3B CoA-ligase~TIGRFAM: succinyl-CoA synthetase%2C alpha subunit gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1087 Thena_1088 Thena_1088 Thena_1088 1106632 1107729 - succinyl-CoA synthetase%2C beta subunit COGs: COG0045 Succinyl-CoA synthetase beta subunit~InterPro IPR005809:IPR013650:IPR005811~KEGG: opr:Ocepr_1026 succinyl-CoA synthetase (ADP-forming) beta subunit~PFAM: ATP-grasp fold%2C succinyl-CoA synthetase-type%3B ATP-citrate lyase/succinyl-CoA ligase~PRIAM: Succinate--CoA ligase (ADP-forming)~SPTR: Succinyl-CoA synthetase (ADP-forming) beta subunit%3B~TIGRFAM: Succinyl-CoA synthetase%2C beta subunit~IMG reference gene:2504784491~PFAM: CoA-ligase%3B ATP-grasp domain~TIGRFAM: succinyl-CoA synthetase%2C beta subunit gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1088 Thena_1089 Thena_1089 Thena_1089 1107745 1108314 - 2-oxoglutarate synthase COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: cst:CLOST_1471 2-oxoglutarate synthase subunit korc (2-ketoglutarate oxidoreductase gamma chain) (kor) (2-oxoglutarate-ferredoxin oxidoreductase subunit gamma)~PFAM: Pyruvate/ketoisovalerate oxidoreductase~PRIAM: 2-oxoglutarate synthase~SPTR: 2-oxoglutarate synthase subunit korC (2-ketoglutarate oxidoreductase gamma chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase subunit gamma)%3B~IMG reference gene:2504784492~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1089 Thena_1090 Thena_1090 Thena_1090 1108311 1109138 - 2-oxoglutarate synthase COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766~KEGG: toc:Toce_1203 2-oxoglutarate ferredoxin oxidoreductase%2C beta subunit~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding~PRIAM: 2-oxoglutarate synthase~SPTR: 2-oxoglutarate ferredoxin oxidoreductase%2C beta subunit%3B~IMG reference gene:2504784493~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1090 Thena_1091 Thena_1091 Thena_1091 1109135 1110271 - 2-oxoglutarate synthase COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880~KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein~PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal~PRIAM: 2-oxoglutarate synthase~SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B~IMG reference gene:2504784494~PFAM: domain%3B Transketolase%2C C-terminal domain gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1091 Thena_1092 Thena_1092 Thena_1092 1110268 1110483 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: nth:Nther_1481 4Fe-4S ferredoxin iron-sulfur binding domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504784495 gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1092 Thena_1093 Thena_1093 Thena_1093 1110743 1111246 - 3-isopropylmalate dehydratase small subunit COGs: COG0066 3-isopropylmalate dehydratase small subunit~HAMAP: 3-isopropylmalate dehydratase small subunit~InterPro IPR011827:IPR000573~KEGG: abi:Aboo_1465 3-isopropylmalate dehydratase%2C small subunit~PFAM: Aconitase A/isopropylmalate dehydratase small subunit%2C swivel~PRIAM: (R)-2-methylmalate dehydratase~SPTR: 3-isopropylmalate dehydratase%2C small subunit%3B~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit%2C subgroup~IMG reference gene:2504784496~PFAM: Aconitase C-terminal domain~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1093 Thena_1094 Thena_1094 Thena_1094 1111287 1112528 - 3-isopropylmalate dehydratase large subunit COGs: COG0065 3-isopropylmalate dehydratase large subunit~HAMAP: Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic~InterPro IPR006251:IPR011826:IPR001030~KEGG: tnp:Tnap_0923 3-isopropylmalate dehydratase~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha~SPTR: 3-isopropylmalate dehydratase large subunit 2%3B~TIGRFAM: Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic%3B Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C subgroup~IMG reference gene:2504784497~PFAM: Aconitase family (aconitate hydratase)~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%3B homoaconitate hydratase family protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1094 Thena_1095 Thena_1095 Thena_1095 1112663 1113541 + Carboxyvinyl-carboxyphosphonatephosphorylmutase COGs: COG2513 PEP phosphonomutase~InterPro IPR000918~KEGG: nth:Nther_2154 carboxyvinyl-carboxyphosphonate phosphorylmutase~PFAM: Isocitrate lyase/phosphorylmutase~PRIAM: Carboxyvinyl-carboxyphosphonate phosphorylmutase~SPTR: Methylisocitrate lyase%3B~IMG reference gene:2504784498~PFAM: Isocitrate lyase family~TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1095 Thena_1096 Thena_1096 Thena_1096 1113620 1115857 - isocitrate dehydrogenase%2C NADP-dependent COGs: COG2838 Monomeric isocitrate dehydrogenase~InterPro IPR004436~KEGG: ddf:DEFDS_0918 isocitrate dehydrogenase NADP-dependent~PFAM: Isocitrate dehydrogenase NADP-dependent%2C monomeric type~PRIAM: Isocitrate dehydrogenase (NADP(+))~SPTR: Isocitrate dehydrogenase%2C NADP-dependent%3B~TIGRFAM: Isocitrate dehydrogenase NADP-dependent%2C monomeric type~IMG reference gene:2504784499~PFAM: Monomeric isocitrate dehydrogenase~TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent%2C monomeric type gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1096 Thena_1097 Thena_1097 Thena_1097 1115956 1117758 - Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR019734:IPR001440~KEGG: tet:TTHERM_00864990 TPR Domain containing protein~PFAM: Tetratricopeptide TPR-1~SMART: Tetratricopeptide repeat~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784500 gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1097 Thena_1098 Thena_1098 Thena_1098 1117758 1121066 - hypothetical protein KEGG: sul:SYO3AOP1_1669 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784501~PFAM: Eco57I restriction endonuclease gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1098 Thena_1099 Thena_1099 Thena_1099 1121063 1124422 - helicase domain-containing protein InterPro IPR014001:IPR001650:IPR006935~KEGG: tal:Thal_0495 helicase domain protein~PFAM: DNA/RNA helicase%2C C-terminal%3B Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit~SMART: DNA/RNA helicase%2C C-terminal%3B DEAD-like helicase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784502~PFAM: Helicase conserved C-terminal domain%3B SNF2 family N-terminal domain gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1099 Thena_1100 Thena_1100 Thena_1100 1124855 1125928 - diguanylate phosphodiesterase COGs: COG2200 FOG: EAL domain~InterPro IPR001633~KEGG: abu:Abu_0830 EAL domain-containing protein~PFAM: Diguanylate phosphodiesterase%2C predicted~SMART: Diguanylate phosphodiesterase%2C predicted~SPTR: EAL domain protein%3B~IMG reference gene:2504784503~PFAM: EAL domain gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1100 Thena_1101 Thena_1101 Thena_1101 1126088 1127284 - Cyclopropane-fatty-acyl-phospholipid synthase COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase~InterPro IPR003333~KEGG: cjj:CJJ81176_1198 cyclopropane-fatty-acyl-phospholipid synthase%2C putative~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase~PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase~SPTR: Cyclopropane-fatty-acyl-phospholipid synthase%2C putative%3B~IMG reference gene:2504784504~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1101 Thena_1102 Thena_1102 Thena_1102 1127536 1128665 + pseudogene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1102 Thena_1103 Thena_1103 Thena_1103 1129051 1130292 + hypothetical protein KEGG: bfr:BF1160 hypothetical protein~SPTR: VanZ family protein%3B~IMG reference gene:2504784507 gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1103 Thena_1104 Thena_1104 Thena_1104 1130605 1134417 - hypothetical protein KEGG: dae:Dtox_1422 XRE family transcriptional regulator~SPTR: XRE family transcriptional regulator%3B~IMG reference gene:2504784508 gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1104 Thena_1105 Thena_1105 Thena_1105 1134587 1135420 - beta-lactamase domain-containing protein COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II~KEGG: ppd:Ppro_1945 beta-lactamase domain-containing protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504784509~PFAM: Metallo-beta-lactamase superfamily gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1105 Thena_1106 Thena_1106 Thena_1106 1135641 1136501 - pseudogene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1106 Thena_1107 Thena_1107 Thena_1107 1136568 1137344 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: sku:Sulku_2743 IstB domain protein ATP-binding protein~PFAM: IstB-like ATP-binding protein~SMART: ATPase%2C AAA+ type%2C core~SPTR: IstB domain protein ATP-binding protein%3B~IMG reference gene:2504784511~PFAM: IstB-like ATP binding protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1107 Thena_1108 Thena_1108 Thena_1108 1137337 1138050 - pseudogene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1108 Thena_1109 Thena_1109 Thena_1109 1138063 1138407 + pseudogene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1109 Thena_1110 Thena_1110 Thena_1110 1138573 1138762 + pseudogene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1110 Thena_1111 Thena_1111 Thena_1111 1138832 1139023 + hypothetical protein IMG reference gene:2504784515 gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1111 Thena_1112 Thena_1112 Thena_1112 1139082 1140029 + hypothetical protein KEGG: cyj:Cyan7822_4851 RimK domain-containing protein ATP-grasp~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784516 gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1112 Thena_1113 Thena_1113 Thena_1113 1140030 1141724 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593:IPR001140:IPR003439~KEGG: sfu:Sfum_3555 ABC transporter related~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane region~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~IMG reference gene:2504784517~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1113 Thena_1114 Thena_1114 Thena_1114 1141839 1143047 + cysteine desulfurase NifS COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase~InterPro IPR017772:IPR000192~KEGG: clj:CLJU_c12110 homocysteine desulfhydrase~PFAM: Aminotransferase%2C class V/Cysteine desulfurase~PRIAM: Cysteine desulfurase~SPTR: Cysteine desulfurase%3B~TIGRFAM: Cysteine desulfurase%2C NifS%2C bacterial/archaeal~IMG reference gene:2504784518~PFAM: Aminotransferase class-V~TIGRFAM: cysteine desulfurase NifS gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1114 Thena_1115 Thena_1115 Thena_1115 1143029 1143457 + FeS cluster assembly scaffold protein NifU COGs: COG0822 NifU homolog involved in Fe-S cluster formation~InterPro IPR017787:IPR002871~KEGG: ckr:CKR_1215 hypothetical protein~PFAM: NIF system FeS cluster assembly%2C NifU%2C N-terminal~SPTR: Putative uncharacterized protein%3B~TIGRFAM: NIF system FeS cluster assembly%2C NifU-like~IMG reference gene:2504784519~PFAM: NifU-like N terminal domain~TIGRFAM: FeS cluster assembly scaffold IscU%3B FeS cluster assembly scaffold protein NifU%2C Clostridium type gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1115 Thena_1116 Thena_1116 Thena_1116 1143967 1145082 + hypothetical protein KEGG: cni:Calni_1744 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784520 gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1116 Thena_1117 Thena_1117 Thena_1117 1145185 1146630 + sulfide-quinone reductase%2C putative COGs: COG1252 NADH dehydrogenase FAD-containing subunit~KEGG: slt:Slit_1147 sulfide-quinone reductase%2C putative~SPTR: Sulfide-quinone reductase%2C putative%3B~IMG reference gene:2504784521~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1117 Thena_1118 Thena_1118 Thena_1118 1146635 1146802 + hypothetical protein KEGG: ant:Arnit_0804 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated~IMG reference gene:2504784522 gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1118 Thena_1119 Thena_1119 Thena_1119 1146813 1148159 - L-seryl-tRNA(Sec) selenium transferase COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]~HAMAP: L-seryl-tRNA(Sec) selenium transferase~InterPro IPR004534:IPR018319~KEGG: aae:aq_1031 selenocysteine synthase~PFAM: Pyridoxal phosphate-dependent transferase~PRIAM: L-seryl-tRNA(Sec) selenium transferase~SPTR: L-seryl-tRNA(Sec) selenium transferase%3B~TIGRFAM: L-seryl-tRNA selenium transferase~IMG reference gene:2504784523~PFAM: L-seryl-tRNA selenium transferase~TIGRFAM: seryl-tRNA(sec) selenium transferase gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1119 Thena_1120 Thena_1120 Thena_1120 1148167 1148691 - hypothetical protein IMG reference gene:2504784524 gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1120 Thena_1121 Thena_1121 Thena_1121 1148755 1151877 - transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family COGs: COG0841 Cation/multidrug efflux pump~InterPro IPR004764:IPR001036~KEGG: afn:Acfer_0247 transporter%2C hydrophobe/amphiphile efflux-1 (HAE1) family~PFAM: Acriflavin resistance protein~SPTR: Multidrug efflux RND transporter MexF%3B~TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1~IMG reference gene:2504784525~PFAM: AcrB/AcrD/AcrF family~TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1121 Thena_1122 Thena_1122 Thena_1122 1151881 1153053 - efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR006143~KEGG: afn:Acfer_0246 efflux transporter%2C RND family%2C MFP subunit~PFAM: Secretion protein HlyD~SPTR: Secretion protein HlyD%3B~TIGRFAM: Secretion protein HlyD~IMG reference gene:2504784526~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1122 Thena_1123 Thena_1123 Thena_1123 1153056 1154390 - outer membrane efflux protein COGs: COG1538 Outer membrane protein~InterPro IPR003423~KEGG: afn:Acfer_1698 outer membrane efflux protein~PFAM: Outer membrane efflux protein~SPTR: Outer membrane efflux protein%3B~IMG reference gene:2504784527~PFAM: Outer membrane efflux protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1123 Thena_1124 Thena_1124 Thena_1124 1154387 1154953 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: dth:DICTH_0060 transcriptional regulator%2C AcrR family~PFAM: Transcriptional regulator%2C TetR-like%2C DNA-binding%2C bacterial/archaeal~SPTR: Transcriptional regulator%2C AcrR family%3B~IMG reference gene:2504784528~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1124 Thena_1125 Thena_1125 Thena_1125 1155431 1155724 + hypothetical protein KEGG: tte:TTE0868 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784530 gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1125 Thena_1126 Thena_1126 Thena_1126 1155855 1159337 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) COGs: COG2200 FOG: EAL domain~InterProIPR000014:IPR000160:IPR001610:IPR001633:IPR 013655:IPR013767:IPR003018~KEGG: ddf:DEFDS_1856 hypothetical protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold%3B PAS fold-3%3B GAF~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS%3B PAC motif~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784532~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1126 Thena_1127 Thena_1127 Thena_1127 1159385 1161205 - threonyl-tRNA synthetase COGs: COG0441 Threonyl-tRNA synthetase~InterPro IPR002320:IPR012947:IPR002314:IPR004154~KEGG: ddf:DEFDS_1504 threonyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved region%3B Threonyl/alanyl tRNA synthetase%2C SAD%3B Anticodon-binding~SPTR: Threonyl-tRNA synthetase%3B~TIGRFAM: Threonyl-tRNA synthetase%2C class IIa~IMG reference gene:2504784533~PFAM: Anticodon binding domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: threonyl-tRNA synthetase gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1127 Thena_1128 Thena_1128 Thena_1128 1161483 1162367 - diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: aar:Acear_1996 diguanylate cyclase with PAS/PAC sensor~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: Diguanylate cyclase%2C predicted~IMG reference gene:2504784535~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1128 Thena_1129 Thena_1129 Thena_1129 1162463 1163356 - beta-lactamase domain-containing protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: tle:Tlet_1564 beta-lactamase domain-containing protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504784536~PFAM: Metallo-beta-lactamase superfamily gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1129 Thena_1130 Thena_1130 Thena_1130 1163425 1164687 + AAA ATPase central domain protein COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase~InterPro IPR003593:IPR003959~KEGG: chy:CHY_2201 recombination factor protein RarA~PFAM: ATPase%2C AAA-type%2C core~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATPase%2C AAA family%3B~IMG reference gene:2504784537~PFAM: MgsA AAA+ ATPase C terminal%3B Holliday junction DNA helicase ruvB N-terminus gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1130 Thena_1131 Thena_1131 Thena_1131 1164689 1165333 - Zn-dependent hydrolase of the beta-lactamase fold-like protein COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold~KEGG: fpl:Ferp_1092 Zn-dependent hydrolase of the beta-lactamase fold-like protein~SPTR: Zn-dependent hydrolase of the beta-lactamase fold-like protein%3B~IMG reference gene:2504784538 gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1131 Thena_1132 Thena_1132 Thena_1132 1165501 1166526 + Ketopantoate reductase ApbA/PanE domain protein COGs: COG1893 Ketopantoate reductase~InterPro IPR013332:IPR013752~KEGG: pab:PAB0512 2-dehydropantoate 2-reductase~PFAM: Ketopantoate reductase ApbA/PanE%2C N-terminal%3B Ketopantoate reductase ApbA/PanE%2C C-terminal~SPTR: 2-dehydropantoate 2-reductase%3B~IMG reference gene:2504784539~PFAM: Ketopantoate reductase PanE/ApbA%3B Ketopantoate reductase PanE/ApbA C terminal~TIGRFAM: 2-dehydropantoate 2-reductase gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1132 Thena_1133 Thena_1133 Thena_1133 1166527 1167897 + outer membrane efflux protein COGs: COG1538 Outer membrane protein~InterPro IPR003423~KEGG: ppd:Ppro_3710 outer membrane efflux protein~PFAM: Outer membrane efflux protein~SPTR: Outer membrane efflux protein%3B~IMG reference gene:2504784540~PFAM: Outer membrane efflux protein gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1133 Thena_1134 Thena_1134 Thena_1134 1167932 1169038 + efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR006143~KEGG: ote:Oter_0322 RND family efflux transporter MFP subunit~PFAM: Secretion protein HlyD~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: Secretion protein HlyD~IMG reference gene:2504784541~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1134 Thena_1135 Thena_1135 Thena_1135 1169035 1169775 + Phosphonate-transporting ATPase COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: pmx:PERMA_0680 macrolide export ATP-binding/permease protein MacB~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Macrolide export ATP-binding/permease protein MacB%3B~IMG reference gene:2504784542~PFAM: ABC transporter gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1135 Thena_1136 Thena_1136 Thena_1136 1169772 1170980 + protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: cni:Calni_0835 hypothetical protein~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784543~PFAM: Predicted permease gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1136 Thena_1137 Thena_1137 Thena_1137 1170977 1172197 + protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: afn:Acfer_0232 protein of unknown function DUF214~PFAM: Protein of unknown function DUF214%2C permase predicted~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784544~PFAM: Predicted permease gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1137 Thena_1138 Thena_1138 Thena_1138 1172259 1172912 - formate dehydrogenase%2C putative COGs: COG2864 Cytochrome b subunit of formate dehydrogenase~KEGG: swo:Swol_1927 formate dehydrogenase%2C putative~SPTR: Formate dehydrogenase%2C gamma subunit%3B~IMG reference gene:2504784545~PFAM: Prokaryotic cytochrome b561~TIGRFAM: formate dehydrogenase%2C gamma subunit gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1138 Thena_1139 Thena_1139 Thena_1139 1172912 1173691 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~InterPro IPR001450~KEGG: shn:Shewana3_0103 formate dehydrogenase beta subunit~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~IMG reference gene:2504784546~TIGRFAM: formate dehydrogenase%2C beta subunit%2C Fe-S containing gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1139 Thena_1140 Thena_1140 Thena_1140 1173693 1176689 - formate dehydrogenase%2C alpha subunit COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterProIPR006443:IPR006311:IPR006963:IPR006656:IPR 006657~KEGG: chy:CHY_0793 formate dehydrogenase-O%2C major subunit%2C selenocysteine-containing~PFAM: Molybdopterin oxidoreductase%3B Molybdopterin oxidoreductase Fe4S4 region%3B Molydopterin dinucleotide-binding region~PRIAM: Nitrate reductase~SPTR: Formate dehydrogenase%2C alpha subunit%3B~TIGRFAM: Formate dehydrogenase%2C alpha subunit%2C anaerobic%3B Twin-arginine translocation pathway%2C signal sequence~IMG reference gene:2504784547~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain~TIGRFAM: formate dehydrogenase%2C alpha subunit%2C proteobacterial-type gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1140 Thena_1141 Thena_1141 Thena_1141 1176940 1177725 - formate dehydrogenase accessory protein COGs: COG3058 Uncharacterized protein involved in formate dehydrogenase formation~InterPro IPR006452~KEGG: sat:SYN_00288 formate dehydrogenase formation protein~PFAM: Formate dehydrogenase accessory protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784548~PFAM: Protein involved in formate dehydrogenase formation gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1141 Thena_1142 Thena_1142 Thena_1142 1177911 1178561 - formate dehydrogenase%2C gamma subunit COGs: COG2864 Cytochrome b subunit of formate dehydrogenase~InterPro IPR006471~KEGG: swo:Swol_1927 formate dehydrogenase%2C putative~SPTR: Formate dehydrogenase%2C gamma subunit%3B~TIGRFAM: Formate dehydrogenase%2C gamma subunit~IMG reference gene:2504784549~PFAM: Prokaryotic cytochrome b561~TIGRFAM: formate dehydrogenase%2C gamma subunit gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1142 Thena_1143 Thena_1143 Thena_1143 1178561 1179340 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~InterPro IPR001450~KEGG: shn:Shewana3_0103 formate dehydrogenase beta subunit~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~IMG reference gene:2504784550~PFAM: Formate dehydrogenase N%2C transmembrane%3B 4Fe-4S binding domain~TIGRFAM: formate dehydrogenase%2C beta subunit%2C Fe-S containing gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1143 Thena_1144 Thena_1144 Thena_1144 1179342 1181762 - Nitrate reductase COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterPro IPR006656:IPR006657~KEGG: chy:CHY_0793 formate dehydrogenase-O%2C major subunit%2C selenocysteine-containing~PFAM: Molydopterin dinucleotide-binding region%3B Molybdopterin oxidoreductase~PRIAM: Nitrate reductase~SPTR: Formate dehydrogenase%2C alpha subunit%3B~IMG reference gene:2504784551~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain~TIGRFAM: formate dehydrogenase%2C alpha subunit%2C proteobacterial-type gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1144 Thena_1145 Thena_1145 Thena_1145 1181775 1182335 - molybdopterin oxidoreductase Fe4S4 region COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterPro IPR006963~KEGG: tjr:TherJR_0769 molybdopterin oxidoreductase Fe4s4 region~PFAM: Molybdopterin oxidoreductase Fe4S4 region~SPTR: Formate dehydrogenase%3B~IMG reference gene:2504784552~PFAM: Molybdopterin oxidoreductase Fe4S4 domain gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1145 Thena_1146 Thena_1146 Thena_1146 1182547 1183899 - Dihydrolipoyl dehydrogenase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterPro IPR013027:IPR004099~KEGG: sua:Saut_0554 pyridine nucleotide-disulfide oxidoreductase dimerization region~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation~PRIAM: Dihydrolipoyl dehydrogenase~SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region%3B~IMG reference gene:2504784553~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain~TIGRFAM: dihydrolipoamide dehydrogenase gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1146 Thena_1147 Thena_1147 Thena_1147 1183902 1184771 - Lipoyl synthase COGs: COG0320 Lipoate synthase~HAMAP: Lipoate synthase~InterPro IPR003698:IPR006638:IPR007197~KEGG: csc:Csac_0871 lipoyl synthase~PFAM: Radical SAM~PRIAM: Lipoyl synthase~SMART: Elongator protein 3/MiaB/NifB~SPTR: Lipoyl synthase%3B~TIGRFAM: Lipoate synthase~IMG reference gene:2504784554~PFAM: Radical SAM superfamily~TIGRFAM: lipoate synthase gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1147 Thena_1148 Thena_1148 Thena_1148 1184737 1185525 - biotin/lipoate A/B protein ligase COGs: COG0095 Lipoate-protein ligase A~InterPro IPR004143~KEGG: gem:GM21_0393 biotin/lipoate A/B protein ligase~PFAM: Biotin/lipoate A/B protein ligase~SPTR: Biotin/lipoate A/B protein ligase%3B~IMG reference gene:2504784555~PFAM: Biotin/lipoate A/B protein ligase family gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1148 Thena_1149 Thena_1149 Thena_1149 1185624 1187057 - aromatic amino acid beta-eliminating lyase/threonine aldolase COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain~InterPro IPR001597~KEGG: gsu:GSU0378 glycine dehydrogenase subunit 2~PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase~SPTR: Glycine cleavage system P protein%2C subunit 2%3B~IMG reference gene:2504784556~PFAM: Glycine cleavage system P-protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1149 Thena_1150 Thena_1150 Thena_1150 1187054 1188376 - glycine dehydrogenase (decarboxylating) subunit 1 COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain~HAMAP: glycine dehydrogenase [decarboxylating] subunit 1~InterPro IPR020580~KEGG: ppd:Ppro_1592 glycine dehydrogenase subunit 1~PFAM: Glycine cleavage system P-protein%2C N-terminal~PRIAM: Glycine dehydrogenase (decarboxylating)~SPTR: Probable glycine dehydrogenase [decarboxylating] subunit 1%3B~IMG reference gene:2504784557~PFAM: Glycine cleavage system P-protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1150 Thena_1151 Thena_1151 Thena_1151 1188379 1188753 - Glycine cleavage system H protein COGs: COG0509 Glycine cleavage system H protein (lipoate-binding)~HAMAP: Glycine cleavage H-protein~InterPro IPR017453:IPR002930~KEGG: kol:Kole_1621 glycine cleavage system protein H~PFAM: Glycine cleavage H-protein~SPTR: Glycine cleavage system H protein%3B~TIGRFAM: Glycine cleavage H-protein%2C subgroup~IMG reference gene:2504784558~PFAM: Glycine cleavage H-protein~TIGRFAM: glycine cleavage system H protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1151 Thena_1152 Thena_1152 Thena_1152 1188787 1189878 - glycine cleavage system T protein COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase)~InterPro IPR006223:IPR006222:IPR013977~KEGG: gur:Gura_0339 glycine cleavage system T protein~PFAM: Glycine cleavage T-protein%2C N-terminal%3B Glycine cleavage T-protein%2C C-terminal barrel~PRIAM: Aminomethyltransferase~SPTR: Glycine cleavage system T protein%3B~TIGRFAM: Glycine cleavage system T protein~IMG reference gene:2504784559~PFAM: Aminomethyltransferase folate-binding domain%3B Glycine cleavage T-protein C-terminal barrel domain~TIGRFAM: glycine cleavage system T protein gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1152 Thena_1153 Thena_1153 Thena_1153 1189891 1190481 - Nucleoside-triphosphatase rdgB COGs: COG0127 Xanthosine triphosphate pyrophosphatase~HAMAP: Nucleoside-triphosphatase rdgB~InterPro IPR002637~KEGG: csc:Csac_0986 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase~PFAM: Ham1-like protein~PRIAM: Nucleoside-triphosphatase~SPTR: Nucleoside-triphosphatase%3B~TIGRFAM: Ham1-like protein~IMG reference gene:2504784560~PFAM: Ham1 family~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1153 Thena_1154 Thena_1154 Thena_1154 1190478 1190927 - D-tyrosyl-tRNA(Tyr) deacylase COGs: COG1490 D-Tyr-tRNAtyr deacylase~HAMAP: D-tyrosyl-tRNA(Tyr) deacylase~InterPro IPR003732~KEGG: sub:SUB0243 D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase~SPTR: D-tyrosyl-tRNA(Tyr) deacylase%3B~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~IMG reference gene:2504784561~PFAM: D-Tyr-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1154 Thena_1155 Thena_1155 Thena_1155 1190980 1191900 - dihydroorotate dehydrogenase family protein COGs: COG0167 Dihydroorotate dehydrogenase~InterPro IPR005720:IPR012135~KEGG: str:Sterm_2665 dihydroorotate dehydrogenase family protein~PFAM: Dihydroorotate dehydrogenase%2C class 1/ 2~PRIAM: Dihydroorotate oxidase~SPTR: Dihydroorotate dehydrogenase%3B~TIGRFAM: Dihydroorotate dehydrogenase%2C class 1%2C core~IMG reference gene:2504784562~PFAM: Dihydroorotate dehydrogenase~TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1155 Thena_1156 Thena_1156 Thena_1156 1192141 1192404 - regulatory protein%2C FmdB family COGs: COG2331 conserved hypothetical protein~InterPro IPR013429~KEGG: ske:Sked_30590 regulatory protein%2C FmdB family~PFAM: Regulatory protein%2C FmdB%2C putative~SPTR: Putative regulatory protein%2C FmdB family%3B~TIGRFAM: Regulatory protein%2C FmdB%2C putative~IMG reference gene:2504784564~PFAM: Zinc ribbon domain~TIGRFAM: putative regulatory protein%2C FmdB family gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1156 Thena_1157 Thena_1157 Thena_1157 1192624 1193211 + oxidoreductase molybdopterin binding protein COGs: COG2041 Sulfite oxidase~InterPro IPR000572~KEGG: hth:HTH_1456 oxidoreductase molybdopterin binding~PFAM: Oxidoreductase%2C molybdopterin binding~SPTR: Oxidoreductase molybdopterin binding%3B~IMG reference gene:2504784565~PFAM: Oxidoreductase molybdopterin binding domain gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1157 Thena_1158 Thena_1158 Thena_1158 1193212 1194864 - hypothetical protein KEGG: ddf:DEFDS_1931 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784566~PFAM: Protein of unknown function (DUF445) gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1158 Thena_1159 Thena_1159 Thena_1159 1194901 1195563 + UBA/THIF-type NAD/FAD binding protein COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2~InterPro IPR000594~KEGG: UBA/ThiF-type NAD/FAD-binding protein~PFAM: UBA/THIF-type NAD/FAD binding fold~SPTR: UBA/THIF-type NAD/FAD binding protein%3B~IMG reference gene:2504784567~PFAM: ThiF family gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1159 Thena_1160 Thena_1160 Thena_1160 1195687 1196865 + proteinase inhibitor I4 serpin COGs: COG4826 Serine protease inhibitor~InterPro IPR000215~KEGG: sul:SYO3AOP1_1417 proteinase inhibitor I4 serpin~PFAM: Protease inhibitor I4%2C serpin~SMART: Protease inhibitor I4%2C serpin~SPTR: Proteinase inhibitor I4 serpin%3B~IMG reference gene:2504784568~PFAM: Serpin (serine protease inhibitor) gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1160 Thena_1161 Thena_1161 Thena_1161 1196882 1197988 + hypothetical protein KEGG: sul:SYO3AOP1_1421 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784569 gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1161 Thena_1162 Thena_1162 Thena_1162 1198037 1199662 - S-layer domain-containing protein InterPro IPR001119~KEGG: afn:Acfer_1668 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein domain protein%3B~IMG reference gene:2504784570~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1162 Thena_1163 Thena_1163 Thena_1163 1199837 1200139 - rubrerythrin KEGG: ttm:Tthe_0972 rubrerythrin~SPTR: Rubrerythrin%3B~IMG reference gene:2504784571~PFAM: Rubrerythrin gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1163 Thena_1164 Thena_1164 Thena_1164 1200251 1201141 - protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: mfa:Mfla_2356 hypothetical protein~PFAM: Protein of unknown function DUF6%2C transmembrane~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784572~PFAM: EamA-like transporter family gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1164 Thena_1165 Thena_1165 Thena_1165 1201318 1201872 - Lipoprotein LpqB%2C GerMN domain protein InterPro IPR019606~KEGG: sti:Sthe_0621 spore germination protein-like protein~PFAM: Lipoprotein LpqB%2C GerMN domain~SPTR: Spore germination protein-like protein%3B~IMG reference gene:2504784573~PFAM: Sporulation and spore germination gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1165 Thena_1166 Thena_1166 Thena_1166 1201869 1202993 - cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: vpr:Vpar_1044 cell wall hydrolase/autolysin~PFAM: Cell wall hydrolase/autolysin%2C catalytic~SMART: Cell wall hydrolase/autolysin%2C catalytic~SPTR: N-acetylmuramoyl-L-alanine amidase%3B~IMG reference gene:2504784574~PFAM: N-acetylmuramoyl-L-alanine amidase%3B Localisation of periplasmic protein complexes~TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1166 Thena_1167 Thena_1167 Thena_1167 1202990 1203691 - hypothetical protein IMG reference gene:2504784575 gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1167 Thena_1168 Thena_1168 Thena_1168 1203814 1204287 - hypothetical protein IMG reference gene:2504784576 gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1168 Thena_1169 Thena_1169 Thena_1169 1204280 1205194 - lipid A biosynthesis acyltransferase COGs: COG1560 Lauroyl/myristoyl acyltransferase~InterPro IPR004960~KEGG: hor:Hore_18900 lipid A biosynthesis lauroyl acyltransferase~PFAM: Bacterial lipid A biosynthesis acyltransferase~SPTR: Lipid A biosynthesis lauroyl acyltransferase%3B~IMG reference gene:2504784577~PFAM: Bacterial lipid A biosynthesis acyltransferase gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1169 Thena_1171 Thena_1171 Thena_1171 1206204 1206749 - type III restriction protein res subunit InterPro IPR006935~KEGG: tal:Thal_1286 type III restriction protein res subunit~PFAM: Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit~SPTR: Type III restriction protein res subunit%3B~IMG reference gene:2504784579~PFAM: Type III restriction enzyme%2C res subunit gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1171 Thena_1172 Thena_1172 Thena_1172 1206749 1206928 - HEPN domain protein InterPro IPR007842~KEGG: rrs:RoseRS_3437 HEPN domain-containing protein~PFAM: HEPN~SPTR: HEPN domain protein%3B~IMG reference gene:2504784580~PFAM: HEPN domain gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1172 Thena_1173 Thena_1173 Thena_1173 1206962 1207078 - pseudogene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1173 Thena_1174 Thena_1174 Thena_1174 1207272 1209038 + diguanylate cyclase with PAS/PAC sensor COGs: COG2199 FOG: GGDEF domain~InterPro IPR000014:IPR000160:IPR013767~KEGG: afr:AFE_3057 sensory box-containing diguanylate cyclase%2C putative~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold~SMART: Diguanylate cyclase%2C predicted%3B PAS~SPTR: Sensory box-containing diguanylate cyclase%2C putative%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784582~PFAM: GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1174 Thena_1175 Thena_1175 Thena_1175 1209142 1209975 + glutamate racemase COGs: COG0796 Glutamate racemase~InterPro IPR004391:IPR015942~KEGG: pmi:PMT9312_0617 glutamate racemase~PFAM: Asp/Glu/hydantoin racemase~PRIAM: Glutamate racemase~SPTR: Glutamate racemase%3B~TIGRFAM: Glutamate racemase~IMG reference gene:2504784583~PFAM: Asp/Glu/Hydantoin racemase~TIGRFAM: glutamate racemase gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1175 Thena_1176 Thena_1176 Thena_1176 1209950 1212823 + (Glutamate--ammonia-ligase) adenylyltransferase COGs: COG1391 Glutamine synthetase adenylyltransferase~InterPro IPR005190:IPR013546~KEGG: pca:Pcar_2171 adenylylating enzyme for glutamine synthetase~PFAM: Glutamate-ammonia ligase adenylyltransferase%3B PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase~PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase~SPTR: Glutamate-ammonia-ligase adenylyltransferase%3B~IMG reference gene:2504784584~PFAM: GlnD PII-uridylyltransferase%3B Glutamate-ammonia ligase adenylyltransferase gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1176 Thena_1177 Thena_1177 Thena_1177 1212825 1214174 - peptidase M18 aminopeptidase I COGs: COG1362 Aspartyl aminopeptidase~InterPro IPR001948~KEGG: tmt:Tmath_1514 peptidase M18 aminopeptidase I~PFAM: Peptidase M18%2C aminopeptidase I~SPTR: Peptidase M18 aminopeptidase I%3B~IMG reference gene:2504784585~PFAM: Aminopeptidase I zinc metalloprotease (M18) gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1177 Thena_1178 Thena_1178 Thena_1178 1214215 1215135 - Radical SAM domain protein COGs: COG0731 Fe-S oxidoreductase~InterPro IPR006638:IPR007197~KEGG: ddf:DEFDS_0828 hypothetical protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784586~PFAM: Radical SAM superfamily gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1178 Thena_1179 Thena_1179 Thena_1179 1215401 1216568 - pseudogene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1179 Thena_1180 Thena_1180 Thena_1180 1216747 1217400 + transaldolase COGs: COG0176 Transaldolase~InterPro IPR004731:IPR001585~KEGG: tle:Tlet_1124 putative transaldolase~PFAM: Transaldolase~SPTR: Probable transaldolase%3B~TIGRFAM: Transaldolase C~IMG reference gene:2504784588~PFAM: Transaldolase~TIGRFAM: fructose-6-phosphate aldolase%2C TalC/MipB family gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1180 Thena_1181 Thena_1181 Thena_1181 1217439 1218404 - Fructose-1%2C6-bisphosphatase class 1 COGs: COG0158 Fructose-1 6-bisphosphatase~HAMAP: Fructose-1%2C6-bisphosphatase~InterPro IPR000146~KEGG: pmx:PERMA_0268 fructose-1%2C6-bisphosphatase~PFAM: Fructose-1%2C6-bisphosphatase~PRIAM: Fructose-bisphosphatase~SPTR: Fructose-1%2C6-bisphosphatase%3B~IMG reference gene:2504784589~PFAM: Fructose-1-6-bisphosphatase gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1181 Thena_1182 Thena_1182 Thena_1182 1218407 1219822 - ketose-bisphosphate aldolase class-II COGs: COG0191 Fructose/tagatose bisphosphate aldolase~InterPro IPR000771~KEGG: sul:SYO3AOP1_0025 aldolase~PFAM: Ketose-bisphosphate aldolase%2C class-II~SPTR: Aldolase%3B~IMG reference gene:2504784590~PFAM: Fructose-bisphosphate aldolase class-II gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1182 Thena_1183 Thena_1183 Thena_1183 1219906 1220820 - hypothetical protein KEGG: mma:MM_3267 hypothetical protein~IMG reference gene:2504784591 gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1183 Thena_1184 Thena_1184 Thena_1184 1220817 1221284 - hypothetical protein IMG reference gene:2504784592 gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1184 Thena_1185 Thena_1185 Thena_1185 1221274 1221828 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284:IPR007627:IPR013249~KEGG: bpu:BPUM_0160 RNA polymerase sigma factor SigW~PFAM: RNA polymerase sigma factor 70%2C region 4 type 2%3B RNA polymerase sigma-70 region 2~SPTR: ECF family DNA-directed RNA polymerase sigma subunit SigW%3B~TIGRFAM: RNA polymerase sigma-70~IMG reference gene:2504784593~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1185 Thena_1186 Thena_1186 Thena_1186 1221981 1222412 - Ferritin Dps family protein COGs: COG2193 Bacterioferritin (cytochrome b1)~InterPro IPR008331~KEGG: mpd:MCP_2109 bacterioferritin~PFAM: Ferritin/Dps protein~SPTR: Bacterioferritin%3B~IMG reference gene:2504784594~PFAM: Ferritin-like domain~TIGRFAM: bacterioferritin gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1186 Thena_1187 Thena_1187 Thena_1187 1222483 1223028 - dTDP-4-dehydrorhamnose 3%2C5-epimerase COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase~InterPro IPR000888~KEGG: tba:TERMP_02084 dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase related~PRIAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~SPTR: dTDP-4-dehydrorhamnose 3%2C5-epimerase%3B~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase related~IMG reference gene:2504784595~PFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1187 Thena_1188 Thena_1188 Thena_1188 1223111 1224370 + 3-isopropylmalate dehydratase large subunit COGs: COG0065 3-isopropylmalate dehydratase large subunit~HAMAP: Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic~InterPro IPR011826:IPR006251:IPR011823:IPR001030~KEGG: cac:CA_C3173 3-isopropylmalate dehydratase large subunit~PFAM: Aconitase/3-isopropylmalate dehydratase large subunit%2C alpha/beta/alpha~SPTR: 3-isopropylmalate dehydratase large subunit%3B~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic%3B Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C subgroup%3B Homoaconitase/3-isopropylmalate dehydratase%2C large subunit%2C prokaryotic~IMG reference gene:2504784596~PFAM: Aconitase family (aconitate hydratase)~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%3B homoaconitate hydratase family protein gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1188 Thena_1189 Thena_1189 Thena_1189 1224372 1224869 + 3-isopropylmalate dehydratase small subunit COGs: COG0066 3-isopropylmalate dehydratase small subunit~HAMAP: 3-isopropylmalate dehydratase small subunit~InterPro IPR011827:IPR000573~KEGG: csc:Csac_1332 3-isopropylmalate dehydratase small subunit~PFAM: Aconitase A/isopropylmalate dehydratase small subunit%2C swivel~PRIAM: (R)-2-methylmalate dehydratase~SPTR: 3-isopropylmalate dehydratase small subunit%3B~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit%2C subgroup~IMG reference gene:2504784597~PFAM: Aconitase C-terminal domain~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1189 Thena_1190 Thena_1190 Thena_1190 1224873 1225940 + 3-isopropylmalate dehydrogenase COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase~HAMAP: Isopropylmalate dehydrogenase~InterPro IPR004429:IPR001804~KEGG: aae:aq_244 3-isopropylmalate dehydrogenase~PFAM: Isocitrate/isopropylmalate dehydrogenase~PRIAM: 3-isopropylmalate dehydrogenase~SPTR: 3-isopropylmalate dehydrogenase%3B~TIGRFAM: Isopropylmalate dehydrogenase~IMG reference gene:2504784598~PFAM: Isocitrate/isopropylmalate dehydrogenase~TIGRFAM: 3-isopropylmalate dehydrogenase gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1190 Thena_1191 Thena_1191 Thena_1191 1225935 1226807 - UTP-glucose-1-phosphate uridylyltransferase COGs: COG1210 UDP-glucose pyrophosphorylase~InterPro IPR005771:IPR005835~KEGG: gsu:GSU0859 UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase~PRIAM: UTP--glucose-1-phosphate uridylyltransferase~SPTR: UTP-glucose-1-phosphate uridylyltransferase%3B~TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase%2C bacterial/archaeal type~IMG reference gene:2504784599~PFAM: Nucleotidyl transferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1191 Thena_1192 Thena_1192 Thena_1192 1226889 1227524 + hypothetical protein KEGG: dae:Dtox_3322 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784600 gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1192 Thena_1193 Thena_1193 Thena_1193 1227521 1228099 + hypothetical protein KEGG: dal:Dalk_0286 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784601~PFAM: Uncharacterised protein family (UPF0153) gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1193 Thena_1194 Thena_1194 Thena_1194 1228092 1228742 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 COGs: COG1011 hydrolase (HAD superfamily)~InterPro IPR006402:IPR005834~KEGG: tye:THEYE_A1877 HAD-superfamily hydrolase~PFAM: Haloacid dehalogenase-like hydrolase~SPTR: HAD-superfamily hydrolase%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~IMG reference gene:2504784602~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1194 Thena_1195 Thena_1195 Thena_1195 1228799 1229839 + N-acetyl-gamma-glutamyl-phosphate reductase COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase~HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase~InterPro IPR000706:IPR000534:IPR012280~KEGG: tpt:Tpet_1069 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase%2C NAD-binding%3B Semialdehyde dehydrogenase%2C dimerisation region~PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase~SPTR: N-acetyl-gamma-glutamyl-phosphate reductase%3B~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~IMG reference gene:2504784603~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase%2C common form gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1195 Thena_1196 Thena_1196 Thena_1196 1229841 1231031 + Arginine biosynthesis bifunctional protein ArgJ COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase)~HAMAP: Arginine biosynthesis protein ArgJ~InterPro IPR002813~KEGG: str:Sterm_1905 arginine biosynthesis bifunctional protein ArgJ~PFAM: Arginine biosynthesis protein ArgJ~PRIAM: Glutamate N-acetyltransferase~SPTR: Arginine biosynthesis bifunctional protein ArgJ%3B~TIGRFAM: Arginine biosynthesis protein ArgJ~IMG reference gene:2504784604~PFAM: ArgJ family~TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1196 Thena_1197 Thena_1197 Thena_1197 1231040 1231906 + acetylglutamate kinase COGs: COG0548 Acetylglutamate kinase~InterPro IPR004662:IPR001048~KEGG: hmo:HM1_1430 acetylglutamate kinase~PFAM: Aspartate/glutamate/uridylate kinase~PRIAM: Acetylglutamate kinase~SPTR: Acetylglutamate kinase%3B~TIGRFAM: Acetylglutamate kinase~IMG reference gene:2504784605~PFAM: Amino acid kinase family~TIGRFAM: acetylglutamate kinase gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1197 Thena_1198 Thena_1198 Thena_1198 1231881 1232153 + hypothetical protein IMG reference gene:2504784606 gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1198 Thena_1199 Thena_1199 Thena_1199 1232143 1232406 + 10 kDa chaperonin COGs: COG0234 Co-chaperonin GroES (HSP10)~HAMAP: Chaperonin Cpn10%2C subgroup~InterPro IPR020818:IPR001476~KEGG: rxy:Rxyl_2295 chaperonin Cpn10~PFAM: Chaperonin Cpn10~SPTR: 10 kDa chaperonin%3B~IMG reference gene:2504784607~PFAM: Chaperonin 10 Kd subunit gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1199 Thena_1200 Thena_1200 Thena_1200 1232412 1233323 + tRNA dimethylallyltransferase COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase~HAMAP: tRNA dimethylallyltransferase~InterPro IPR018022:IPR002627~KEGG: cbf:CLI_1793 tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase~PRIAM: tRNA isopentenyltransferase~SPTR: tRNA dimethylallyltransferase%3B~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~IMG reference gene:2504784608~PFAM: IPP transferase~TIGRFAM: tRNA dimethylallyltransferase gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1200 Thena_1201 Thena_1201 Thena_1201 1233323 1234171 + Diaminopimelate epimerase COGs: COG0253 Diaminopimelate epimerase~HAMAP: Diaminopimelate epimerase~InterPro IPR001653~KEGG: tjr:TherJR_1814 diaminopimelate epimerase~PFAM: Diaminopimelate epimerase~PRIAM: Diaminopimelate epimerase~SPTR: Diaminopimelate epimerase%3B~TIGRFAM: Diaminopimelate epimerase~IMG reference gene:2504784609~PFAM: Diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1201 Thena_1202 Thena_1202 Thena_1202 1234206 1235558 + trigger factor COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)~InterPro IPR005215:IPR008881~KEGG: ttm:Tthe_0881 trigger factor~PFAM: Trigger factor%2C ribosome-binding%2C bacterial~SPTR: Trigger factor%3B~TIGRFAM: Trigger factor~IMG reference gene:2504784610~PFAM: Bacterial trigger factor protein (TF) C-terminus%3B Bacterial trigger factor protein (TF)~TIGRFAM: trigger factor gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1202 Thena_1203 Thena_1203 Thena_1203 1235586 1236185 + ATP-dependent Clp protease proteolytic subunit COGs: COG0740 Protease subunit of ATP-dependent Clp protease~HAMAP: ATP-dependent Clp protease proteolytic subunit~InterPro IPR001907~KEGG: ATP-dependent Clp protease%2C proteolytic subunit ClpP~PFAM: Peptidase S14%2C ClpP~PRIAM: Endopeptidase Clp~SPTR: ATP-dependent Clp protease proteolytic subunit%3B~TIGRFAM: Peptidase S14%2C ClpP~IMG reference gene:2504784611~PFAM: Clp protease~TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1203 Thena_1204 Thena_1204 Thena_1204 1236194 1237435 + ATP-dependent Clp protease ATP-binding subunit clpX COGs: COG1219 ATP-dependent protease Clp ATPase subunit~HAMAP: Clp protease%2C ATP-binding subunit ClpX~InterProIPR004487:IPR003593:IPR010603:IPR013093:IPR 019489~KEGG: pjd:Pjdr2_4448 ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: ATPase associated with various cellular activities%2C AAA-2%3B Zinc finger%2C C4-type%3B Clp ATPase%2C C-terminal~SMART: ATPase%2C AAA+ type%2C core~SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX%3B~TIGRFAM: Clp protease%2C ATP-binding subunit ClpX~IMG reference gene:2504784612~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ClpX C4-type zinc finger~TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1204 Thena_1205 Thena_1205 Thena_1205 1237496 1238110 - Tetratricopeptide TPR_1 repeat-containing protein COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats~InterPro IPR019734:IPR001440~KEGG: mar:MAE_03610 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR-1~SPTR: Tetratricopeptide repeat protein%3B~IMG reference gene:2504784613~PFAM: Tetratricopeptide repeat gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1205 Thena_1206 Thena_1206 Thena_1206 1238126 1239808 - diguanylate cyclase with PAS/PAC sensor COGs: COG2199 FOG: GGDEF domain~InterProIPR000014:IPR000160:IPR001610:IPR013656:IPR 013767~KEGG: chy:CHY_0880 response regulator/sensory box protein/GGDEF domain-containing protein~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold%3B PAS fold-4~PRIAM: Diguanylate kinase~SMART: Diguanylate cyclase%2C predicted%3B PAC motif%3B PAS~SPTR: Response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784614~PFAM: GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1206 Thena_1207 Thena_1207 Thena_1207 1239840 1243268 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain~InterPro IPR000014:IPR000160:IPR001633:IPR013767~KEGG: ddf:DEFDS_1856 hypothetical protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS fold~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted%3B PAS~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784615~PFAM: EAL domain%3B GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1207 Thena_1208 Thena_1208 Thena_1208 1243501 1244877 - methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: hya:HY04AAS1_0194 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~IMG reference gene:2504784616~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1208 Thena_1209 Thena_1209 Thena_1209 1245194 1247389 - primosomal protein N' COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase~InterPro IPR005259:IPR014001:IPR001650:IPR011545~KEGG: tit:Thit_1315 primosomal protein N'~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: Primosomal protein N'%3B~TIGRFAM: Primosomal protein n~IMG reference gene:2504784617~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase~TIGRFAM: primosomal protein N' gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1209 Thena_1210 Thena_1210 Thena_1210 1247422 1248186 + exodeoxyribonuclease III Xth COGs: COG0708 Exonuclease III~InterPro IPR000097:IPR004808:IPR005135~KEGG: tal:Thal_1308 exodeoxyribonuclease III Xth~PFAM: Endonuclease/exonuclease/phosphatase~PRIAM: Exodeoxyribonuclease III~SPTR: Exodeoxyribonuclease III Xth%3B~TIGRFAM: Exodeoxyribonuclease III xth%3B AP endonuclease%2C family 1~IMG reference gene:2504784618~PFAM: Endonuclease/Exonuclease/phosphatase family~TIGRFAM: exodeoxyribonuclease III%3B exodeoxyribonuclease III (xth) gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1210 Thena_1211 Thena_1211 Thena_1211 1248183 1248974 - Ribosomal RNA small subunit methyltransferase A COGs: COG0030 Dimethyladenosine transferase (rRNA methylation)~HAMAP: Ribosomal RNA adenine dimethylase~InterPro IPR011530:IPR020598:IPR001737~KEGG: fph:Fphi_0277 dimethyladenosine transferase~PFAM: Ribosomal RNA adenine methylase transferase~SMART: Ribosomal RNA adenine methylase transferase%2C N-terminal~SPTR: Ribosomal RNA small subunit methyltransferase A%3B~TIGRFAM: Ribosomal RNA adenine dimethylase~IMG reference gene:2504784619~PFAM: Ribosomal RNA adenine dimethylase~TIGRFAM: dimethyladenosine transferase gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1211 Thena_1212 Thena_1212 Thena_1212 1248990 1250021 - 4-hydroxythreonine-4-phosphate dehydrogenase COGs: COG1995 Pyridoxal phosphate biosynthesis protein~InterPro IPR005255~KEGG: pmx:PERMA_0123 4-hydroxythreonine-4-phosphate dehydrogenase~PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA~PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase~SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase%3B~IMG reference gene:2504784620~PFAM: Pyridoxal phosphate biosynthetic protein PdxA gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1212 Thena_1213 Thena_1213 Thena_1213 1250054 1250530 - putative transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~KEGG: tjr:TherJR_1140 putative transcriptional regulator%2C AsnC family~SPTR: Putative transcriptional regulator%2C AsnC family%3B~IMG reference gene:2504784621 gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1213 Thena_1214 Thena_1214 Thena_1214 1250509 1251516 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR006638:IPR007197~KEGG: drm:Dred_2159 radical SAM domain-containing protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~IMG reference gene:2504784622~PFAM: Radical SAM superfamily~TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ2%3B radical SAM additional 4Fe4S-binding domain gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1214 Thena_1215 Thena_1215 Thena_1215 1251550 1252530 - Porphobilinogen synthase COGs: COG0113 Delta-aminolevulinic acid dehydratase~InterPro IPR001731~KEGG: ccb:Clocel_2205 porphobilinogen synthase~PFAM: Tetrapyrrole biosynthesis%2C porphobilinogen synthase~PRIAM: Porphobilinogen synthase~SPTR: Porphobilinogen synthase%3B~IMG reference gene:2504784623~PFAM: Delta-aminolevulinic acid dehydratase gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1215 Thena_1216 Thena_1216 Thena_1216 1252564 1253736 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR006638:IPR007197~KEGG: swo:Swol_0688 metallo cofactor biosynthesis protein~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Metallo cofactor biosynthesis protein%3B~IMG reference gene:2504784624~PFAM: Radical SAM superfamily~TIGRFAM: putative heme d1 biosynthesis radical SAM protein NirJ1%3B radical SAM additional 4Fe4S-binding domain gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1216 Thena_1217 Thena_1217 Thena_1217 1253770 1254543 - ATPase-like%2C ParA/MinD COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR019591~KEGG: ParA/MinD-like ATPase~PFAM: ATPase-like%2C ParA/MinD~SPTR: Nucleotide-binding protein%3B~IMG reference gene:2504784625~PFAM: ParA/MinD ATPase like gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1217 Thena_1218 Thena_1218 Thena_1218 1254556 1255947 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase~InterPro IPR013027:IPR001327~KEGG: chy:CHY_2671 hypothetical protein~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C NAD-binding region~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784626~PFAM: HI0933-like protein%3B Glucose inhibited division protein A gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1218 Thena_1219 Thena_1219 Thena_1219 1256066 1257817 - pyruvate kinase COGs: COG0469 Pyruvate kinase~InterPro IPR001697:IPR015793:IPR015794:IPR008279~KEGG: tjr:TherJR_2325 pyruvate kinase~PFAM: Pyruvate kinase%2C barrel%3B Pyruvate kinase%2C alpha/beta%3B PEP-utilising enzyme%2C mobile region~PRIAM: Pyruvate kinase.%2C Pyruvate%2C water dikinase~SPTR: Pyruvate kinase%3B~TIGRFAM: Pyruvate kinase~IMG reference gene:2504784627~PFAM: Pyruvate kinase%2C barrel domain%3B PEP-utilising enzyme%2C mobile domain%3B Pyruvate kinase%2C alpha/beta domain~TIGRFAM: pyruvate kinase gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1219 Thena_1220 Thena_1220 Thena_1220 1257960 1260728 + WD40 repeat-containing protein COGs: COG2319 FOG: WD40 repeat~InterPro IPR001680:IPR019781~KEGG: cyj:Cyan7822_6361 WD40 repeat-containing protein~PFAM: WD40 repeat%2C subgroup~SMART: WD40 repeat~SPTR: WD40 repeat%2C subgroup%3B~IMG reference gene:2504784628~PFAM: WD domain%2C G-beta repeat gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1220 Thena_1221 Thena_1221 Thena_1221 1260752 1261633 - protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: msv:Mesil_2188 protein of unknown function DUF6 transmembrane~PFAM: Protein of unknown function DUF6%2C transmembrane~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784629~PFAM: EamA-like transporter family gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1221 Thena_1222 Thena_1222 Thena_1222 1261963 1262859 + PP-loop domain protein COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~InterPro IPR011063~KEGG: ddf:DEFDS_0604 hypothetical protein~PFAM: PP-loop~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784630~PFAM: PP-loop family gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1222 Thena_1223 Thena_1223 Thena_1223 1262863 1263630 + tRNA methyltransferase complex GCD14 subunit COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase~InterPro IPR014816~KEGG: tRNA (adenine-N(1)-)-methyltransferase~PFAM: tRNA methyltransferase complex GCD14 subunit~SPTR: tRNA (Adenine-N(1)-)-methyltransferase%3B~IMG reference gene:2504784631~PFAM: tRNA methyltransferase complex GCD14 subunit gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1223 Thena_1224 Thena_1224 Thena_1224 1263635 1264258 - protein of unknown function DUF129 InterPro IPR002847~KEGG: ttm:Tthe_1948 protein of unknown function DUF129~PFAM: F420-0:gamma-glutamyl ligase-related~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784632~PFAM: F420-0:Gamma-glutamyl ligase gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1224 Thena_1225 Thena_1225 Thena_1225 1264236 1264727 - hypothetical protein IMG reference gene:2504784633 gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1225 Thena_1226 Thena_1226 Thena_1226 1264727 1265935 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase~HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase%3B 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C core~InterPro IPR001228:IPR003526~KEGG: adg:Adeg_0401 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C core%3B 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase%3B~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%2C core~IMG reference gene:2504784634~PFAM: YgbB family%3B Uncharacterized protein family UPF0007~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase%3B 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1226 Thena_1227 Thena_1227 Thena_1227 1265932 1267053 - PilT protein domain protein COGs: COG4956 Integral membrane protein (PIN domain superfamily)~InterPro IPR006596:IPR002716:IPR002792~KEGG: aar:Acear_0135 PilT protein domain protein~PFAM: PilT protein%2C N-terminal%3B Deoxyribonuclease/rho motif-related TRAM~SMART: Nucleotide binding protein%2C PINc~SPTR: PilT protein domain protein%3B~IMG reference gene:2504784635~PFAM: PIN domain gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1227 Thena_1228 Thena_1228 Thena_1228 1267067 1268506 + Apolipoprotein N-acyltransferase COGs: COG0815 Apolipoprotein N-acyltransferase~HAMAP: Apolipoprotein N-acyltransferase~InterPro IPR004563:IPR003010~KEGG: ddf:DEFDS_0986 apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: Apolipoprotein N-acyltransferase%3B~TIGRFAM: Apolipoprotein N-acyltransferase~IMG reference gene:2504784636~PFAM: Carbon-nitrogen hydrolase~TIGRFAM: apolipoprotein N-acyltransferase gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1228 Thena_1229 Thena_1229 Thena_1229 1268471 1269118 - phosphoribosyltransferase COGs: COG1926 phosphoribosyltransferase~InterPro IPR000836~KEGG: dau:Daud_2224 phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~SPTR: Phosphoribosyltransferase%3B~IMG reference gene:2504784637~PFAM: Phosphoribosyl transferase domain gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1229 Thena_1230 Thena_1230 Thena_1230 1269111 1270127 - Radical SAM domain protein COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR007197~KEGG: mfv:Mfer_0959 radical sam domain protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~IMG reference gene:2504784638~PFAM: Radical SAM superfamily gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1230 Thena_1231 Thena_1231 Thena_1231 1270146 1270523 - hypothetical protein KEGG: ddi:DDB_G0279149 1-phosphatidylinositol-3-phosphate 5-kinase~IMG reference gene:2504784639 gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1231 Thena_1232 Thena_1232 Thena_1232 1270800 1271750 - import inner membrane translocase subunit Tim44 COGs: COG4395 conserved hypothetical protein~InterPro IPR007379~KEGG: gme:Gmet_1927 import inner membrane translocase subunit Tim44~PFAM: Mitochondrial inner membrane translocase complex%2C subunit Tim44-related~SPTR: Import inner membrane translocase%2C subunit Tim44%3B~IMG reference gene:2504784641~PFAM: Tim44-like domain gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1232 Thena_1233 Thena_1233 Thena_1233 1272007 1275672 - Phosphoribosylformylglycinamidine synthase 2 COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain~HAMAP: Phosphoribosylformylglycinamidine synthase 2~InterPro IPR010074:IPR010075:IPR000728:IPR010918~KEGG: det:DET0379 phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein%2C C-terminal%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: Phosphoribosylformylglycinamidine synthase II%3B~TIGRFAM: Phosphoribosylformylglycinamidine synthase II%3B Phosphoribosylformylglycinamidine synthase I~IMG reference gene:2504784642~PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase%3B AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylformylglycinamidine synthase I%3B phosphoribosylformylglycinamidine synthase II gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1233 Thena_1234 Thena_1234 Thena_1234 1275746 1276618 - protein-(glutamine-N5) methyltransferase%2C release factor-specific COGs: COG2890 Methylase of polypeptide chain release factors~InterPro IPR004556:IPR019874:IPR013216~KEGG: cow:Calow_0888 protein-(glutamine-n5) methyltransferase%2C release factor-specific~PFAM: Methyltransferase type 11~SPTR: Protein-(Glutamine-N5) methyltransferase%2C release factor-specific%3B~TIGRFAM: Protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B Modification methylase HemK~IMG reference gene:2504784643~PFAM: Methyltransferase small domain~TIGRFAM: HemK family putative methylases%3B protein-(glutamine-N5) methyltransferase%2C release factor-specific gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1234 Thena_1235 Thena_1235 Thena_1235 1276669 1277337 + transcriptional regulator%2C GntR family COGs: COG1802 Transcriptional regulators~InterPro IPR000524:IPR011711~KEGG: bmq:BMQ_2866 transcriptional regulator%2C GntR family~PFAM: GntR%2C C-terminal%3B HTH transcriptional regulator%2C GntR~SMART: HTH transcriptional regulator%2C GntR~SPTR: Transcriptional regulator%2C GntR family%3B~IMG reference gene:2504784644~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1235 Thena_1236 Thena_1236 Thena_1236 1277334 1277756 - NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR000086~KEGG: cma:Cmaq_1532 NUDIX hydrolase~PFAM: NUDIX hydrolase domain~SPTR: NUDIX hydrolase%3B~IMG reference gene:2504784645~PFAM: NUDIX domain gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1236 Thena_1237 Thena_1237 Thena_1237 1277760 1278467 - Sec-independent protein translocase%2C TatC subunit COGs: COG0805 Sec-independent protein secretion pathway component TatC~InterPro IPR019822:IPR002033~KEGG: sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase~SPTR: Sec-independent protein translocase protein TatC%3B~TIGRFAM: Twin arginine-targeting protein translocase%2C TatC~IMG reference gene:2504784646~PFAM: Sec-independent protein translocase protein (TatC)~TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1237 Thena_1238 Thena_1238 Thena_1238 1278464 1279009 - 2'-5' RNA ligase COGs: COG1514 2'-5' RNA ligase~InterPro IPR004175:IPR014051~KEGG: dev:DhcVS_1234 2 -5 RNA ligase~PFAM: Phosphoesterase%2C HXTX~SPTR: 2-5 RNA ligase%3B~TIGRFAM: 2'%2C5' RNA ligase~IMG reference gene:2504784647~PFAM: 2'%2C5' RNA ligase family~TIGRFAM: 2'-5' RNA ligase gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1238 Thena_1239 Thena_1239 Thena_1239 1279006 1280139 - CinA domain protein COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA~InterPro IPR008136:IPR001453~KEGG: tme:Tmel_0783 competence/damage-inducible protein CinA~PFAM: Molybdopterin binding%3B CinA%2C C-terminal~SPTR: CinA-like protein%3B~TIGRFAM: CinA%2C C-terminal~IMG reference gene:2504784648~PFAM: Probable molybdopterin binding domain%3B Competence-damaged protein~TIGRFAM: competence/damage-inducible protein CinA C-terminal domain%3B molybdenum cofactor synthesis domain gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1239 Thena_1240 Thena_1240 Thena_1240 1280136 1281449 - Ribosomal protein S12 methylthiotransferase rimO COGs: COG0621 2-methylthioadenine synthetase~HAMAP: Ribosomal protein S12 methylthiotransferase RimO~InterProIPR005839:IPR005840:IPR006638:IPR013848:IPR 007197~KEGG: ttm:Tthe_1394 RNA modification enzyme%2C MiaB family~PFAM: Methylthiotransferase%2C N-terminal%3B Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: RNA modification enzyme%2C MiaB family%3B~TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO%3B Methylthiotransferase~IMG reference gene:2504784649~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: ribosomal protein S12 methylthiotransferase RimO%3B radical SAM methylthiotransferase%2C MiaB/RimO family gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1240 Thena_1241 Thena_1241 Thena_1241 1281446 1282171 - transcriptional regulator%2C XRE family COGs: COG1426 conserved hypothetical protein~InterPro IPR001387~KEGG: tye:THEYE_A1071 hypothetical protein~SMART: Helix-turn-helix type 3~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784650 gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1241 Thena_1242 Thena_1242 Thena_1242 1282174 1282677 - chromosome segregation and condensation protein%2C ScpB COGs: COG1386 transcriptional regulator protein containing the HTH domain~InterPro IPR005234~KEGG: cbf:CLI_1858 segregation and condensation protein B~PFAM: Chromosome segregation/condensation protein ScpB%2C prokaryote~SPTR: Segregation and condensation protein B%3B~TIGRFAM: Chromosome segregation/condensation protein ScpB%2C prokaryote~IMG reference gene:2504784651~PFAM: Putative transcriptional regulators (Ypuh-like)~TIGRFAM: segregation and condensation protein B gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1242 Thena_1243 Thena_1243 Thena_1243 1282664 1283224 - chromosome segregation and condensation protein ScpA InterPro IPR003768~PFAM: Prokaryotic chromosome segregation/condensation protein ScpA~IMG reference gene:2504784652 gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1243 Thena_1244 Thena_1244 Thena_1244 1283226 1284215 - tryptophanyl-tRNA synthetase COGs: COG0180 Tryptophanyl-tRNA synthetase~InterPro IPR002306:IPR002305~KEGG: dtu:Dtur_1469 tryptophanyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ib~PRIAM: Tryptophan--tRNA ligase~SPTR: Tryptophanyl-tRNA synthetase%3B~TIGRFAM: Tryptophanyl-tRNA synthetase%2C class Ib~IMG reference gene:2504784653~PFAM: tRNA synthetases class I (W and Y)~TIGRFAM: tryptophanyl-tRNA synthetase gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1244 Thena_1245 Thena_1245 Thena_1245 1284232 1284681 - metal dependent phosphohydrolase InterPro IPR006675~KEGG: cbt:CLH_0014 putative HD domain~SPTR: Putative uncharacterized protein%3B~TIGRFAM: HDIG~IMG reference gene:2504784654 gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1245 Thena_1246 Thena_1246 Thena_1246 1284684 1285283 - peptidase M50 COGs: COG1994 Zn-dependent protease~InterPro IPR008915~KEGG: btk:BT9727_5058 membrane protein%3B metalloprotease~PFAM: Peptidase M50~SPTR: Peptidase%2C M50 family%3B~IMG reference gene:2504784655~PFAM: Peptidase family M50 gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1246 Thena_1247 Thena_1247 Thena_1247 1285292 1287895 - CBS domain containing protein COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR000644:IPR001667:IPR003156:IPR002646~KEGG: tjr:TherJR_1640 polynucleotide adenylyltransferase region~PFAM: Cystathionine beta-synthase%2C core%3B Phosphoesterase%2C RecJ-like%3B Phosphoesterase%2C DHHA1%3B Polynucleotide adenylyltransferase region~SMART: Cystathionine beta-synthase%2C core~SPTR: Polynucleotide adenylyltransferase region%3B~IMG reference gene:2504784656~PFAM: DHH family%3B DHHA1 domain%3B CBS domain%3B Poly A polymerase head domain gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1247 Thena_1248 Thena_1248 Thena_1248 1287892 1289169 - Thymidine phosphorylase COGs: COG0213 Thymidine phosphorylase~InterPro IPR017459:IPR000312~KEGG: dtu:Dtur_1471 pyrimidine-nucleoside phosphorylase~PFAM: Glycosyl transferase%2C family 3%2C N-terminal%3B Glycosyl transferase%2C family 3~PRIAM: Thymidine phosphorylase~SPTR: Pyrimidine-nucleoside phosphorylase%3B~IMG reference gene:2504784657~PFAM: Glycosyl transferase family%2C a/b domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: pyrimidine-nucleoside phosphorylase gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1248 Thena_1249 Thena_1249 Thena_1249 1289156 1290133 - hypothetical protein KEGG: aar:Acear_2172 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784658 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1249 Thena_1250 Thena_1250 Thena_1250 1290078 1290908 - GTP-sensing pleiotropic transcriptional repressor CodY COGs: COG4465 Pleiotropic transcriptional repressor~HAMAP: GTP-sensing transcriptional pleiotropic repressor codY~InterPro IPR010312:IPR013198~KEGG: hor:Hore_07580 transcriptional repressor CodY~PFAM: GTP-sensing transcriptional pleiotropic repressor CodY%2C N-terminal%3B GTP-sensing helix-turn-helix%2C CodY%2C C-terminal~SPTR: GTP-sensing transcriptional pleiotropic repressor CodY%3B~IMG reference gene:2504784659~PFAM: CodY helix-turn-helix domain%3B CodY GAF-like domain~TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1250 Thena_1251 Thena_1251 Thena_1251 1290975 1291730 - Multifunctional protein surE COGs: COG0496 acid phosphatase~HAMAP: Multifunctional protein surE~InterPro IPR002828~KEGG: slp:Slip_1208 stationary-phase survival protein SurE~PFAM: Survival protein SurE-like phosphatase/nucleotidase~SPTR: 5'-nucleotidase surE%3B~TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase~IMG reference gene:2504784660~PFAM: Survival protein SurE~TIGRFAM: 5'/3'-nucleotidase SurE gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1251 Thena_1252 Thena_1252 Thena_1252 1291724 1292587 - GTP-binding protein Era-like-protein COGs: COG1159 GTPase~HAMAP: GTP-binding protein Era~InterPro IPR005225:IPR005662:IPR002917:IPR004044~KEGG: ttm:Tthe_1200 GTP-binding protein Era~PFAM: GTP-binding protein%2C HSR1-related%3B K Homology%2C type 2~SPTR: GTP-binding protein Era%3B~TIGRFAM: GTP-binding protein Era%3B Small GTP-binding protein~IMG reference gene:2504784661~PFAM: KH domain%3B GTPase of unknown function~TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein domain gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1252 Thena_1253 Thena_1253 Thena_1253 1292588 1293952 - protein of unknown function DUF711 COGs: COG2848 conserved hypothetical protein~InterPro IPR007841~KEGG: dau:Daud_1353 hypothetical protein~PFAM: Protein of unknown function DUF711~SPTR: UPF0210 protein Daud_1353%3B~IMG reference gene:2504784662~PFAM: Uncharacterized ACR (DUF711) gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1253 Thena_1254 Thena_1254 Thena_1254 1293956 1294234 - ACT domain-containing protein COGs: COG3830 ACT domain-containing protein~InterPro IPR002912~KEGG: ckr:CKR_0694 hypothetical protein~PFAM: Amino acid-binding ACT~SPTR: UPF0237 protein CKR_0694%3B~IMG reference gene:2504784663~PFAM: ACT domain gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1254 Thena_1255 Thena_1255 Thena_1255 1294234 1295172 - Spermidine synthase COGs: COG0421 Spermidine synthase~HAMAP: Spermidine synthase~InterPro IPR001045~KEGG: iho:Igni_0633 spermine synthase~PFAM: Spermine synthase~PRIAM: Spermidine synthase~SPTR: Spermidine synthase 2%3B~IMG reference gene:2504784664~PFAM: Spermine/spermidine synthase~TIGRFAM: spermidine synthase gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1255 Thena_1256 Thena_1256 Thena_1256 1295301 1297187 - acetate/CoA ligase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR011904:IPR000873~KEGG: ank:AnaeK_3479 acetate/CoA ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Acetate--CoA ligase~SPTR: Acetate/CoA ligase%3B~TIGRFAM: Acetate--CoA ligase~IMG reference gene:2504784665~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetate--CoA ligase%3B acetoacetyl-CoA synthase gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1256 Thena_1257 Thena_1257 Thena_1257 1297412 1297756 - Cupin 2 conserved barrel domain protein InterPro IPR013096~KEGG: ddf:DEFDS_1702 hypothetical protein~PFAM: Cupin 2%2C conserved barrel~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784666~PFAM: Cupin domain gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1257 Thena_1258 Thena_1258 Thena_1258 1297854 1298957 - hypothetical protein KEGG: dsa:Desal_3157 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784667 gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1258 Thena_1259 Thena_1259 Thena_1259 1299128 1300723 - Alkaline phosphatase COGs: COG1785 Alkaline phosphatase~InterPro IPR001952~KEGG: cni:Calni_1618 alkaline phosphatase~PFAM: Alkaline phosphatase~SMART: Alkaline phosphatase~SPTR: Alkaline phosphatase%3B~IMG reference gene:2504784668~PFAM: Alkaline phosphatase gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1259 Thena_1260 Thena_1260 Thena_1260 1300986 1302278 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: tvo:TVN0070 proline/betaine transport permease~PFAM: Major facilitator superfamily MFS-1~SPTR: Proline/betaine transport protein related%3B~IMG reference gene:2504784669~PFAM: Sugar (and other) transporter gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1260 Thena_1261 Thena_1261 Thena_1261 1302288 1303664 + precorrin 3B synthase CobZ COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit~InterPro IPR012831:IPR003953~KEGG: xau:Xaut_2274 tricarballylate dehydrogenase~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal~SPTR: Precorrin 3B synthase CobZ%3B~TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobZ%2C precorrin 3B synthase~IMG reference gene:2504784670~PFAM: FAD binding domain~TIGRFAM: precorrin 3B synthase CobZ gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1261 Thena_1262 Thena_1262 Thena_1262 1303654 1304745 + CitB domain protein InterPro IPR012830~KEGG: sim:M1627_0896 citrate utilization protein B~SPTR: Citrate utilization protein B%3B~TIGRFAM: Citrate utilization protein B~IMG reference gene:2504784671~PFAM: Nitrate reductase gamma subunit~TIGRFAM: CitB domain protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1262 Thena_1263 Thena_1263 Thena_1263 1304768 1305055 + pseudogene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1263 Thena_1264 Thena_1264 Thena_1264 1305131 1306513 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: tvo:TVN0907 major facilitator superfamily permease~PFAM: Major facilitator superfamily MFS-1~SPTR: Metabolite transporter%3B~IMG reference gene:2504784673~PFAM: Sugar (and other) transporter gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1264 Thena_1265 Thena_1265 Thena_1265 1306683 1308437 - Xenobiotic-transporting ATPase COGs: COG4178 ABC-type uncharacterized transport system permease and ATPase components~InterPro IPR003593:IPR010509:IPR003439~KEGG: hya:HY04AAS1_0152 ABC transporter domain protein~PFAM: ABC transporter%2C N-terminal%3B ABC transporter-like~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter domain protein%3B~IMG reference gene:2504784674~PFAM: ABC transporter%3B ABC transporter transmembrane region 2 gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1265 Thena_1266 Thena_1266 Thena_1266 1308576 1309589 - diguanylate cyclase COGs: COG2199 FOG: GGDEF domain~InterPro IPR000160~KEGG: nis:NIS_0636 hypothetical protein~PFAM: Diguanylate cyclase%2C predicted~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase (GGDEF domain)%3B~TIGRFAM: Diguanylate cyclase%2C predicted~IMG reference gene:2504784675~PFAM: GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1266 Thena_1267 Thena_1267 Thena_1267 1309601 1310260 - YheO-like domain-containing protein COGs: COG2964 conserved hypothetical protein~InterPro IPR013559~KEGG: adg:Adeg_0108 YheO domain protein~PFAM: YheO-like~SPTR: YheO domain protein%3B~IMG reference gene:2504784676~PFAM: YheO-like PAS domain gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1267 Thena_1268 Thena_1268 Thena_1268 1310327 1311610 - UPF0597 protein yhaM COGs: COG3681 conserved hypothetical protein~HAMAP: Uncharacterised protein family UPF0597~InterPro IPR010469~KEGG: tte:TTE0269 hypothetical protein~SPTR: UPF0597 protein CDSM653_1286%3B~IMG reference gene:2504784677~PFAM: Serine dehydratase alpha chain gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1268 Thena_1269 Thena_1269 Thena_1269 1311752 1315018 - pseudogene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1269 Thena_1270 Thena_1270 Thena_1270 1315073 1315462 - endoribonuclease L-PSP COGs: COG0251 Putative translation initiation inhibitor yjgF family~InterPro IPR006056:IPR006175~KEGG: aco:Amico_0117 endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~SPTR: Putative endoribonuclease L-PSP%3B~TIGRFAM: YjgF-like protein~IMG reference gene:2504784679~PFAM: Endoribonuclease L-PSP~TIGRFAM: endoribonuclease L-PSP%2C putative gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1270 Thena_1271 Thena_1271 Thena_1271 1315550 1316425 - L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit COGs: COG1760 L-serine deaminase~InterPro IPR004642:IPR005130~KEGG: hor:Hore_16330 L-serine ammonia-lyase%2C alpha subunit~PFAM: Serine dehydratase alpha chain~PRIAM: L-serine ammonia-lyase~SPTR: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit%3B~TIGRFAM: L-serine dehydratase%2C alpha subunit~IMG reference gene:2504784680~PFAM: Serine dehydratase alpha chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1271 Thena_1272 Thena_1272 Thena_1272 1316441 1317103 - L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit COGs: COG1760 L-serine deaminase~InterPro IPR004643:IPR005131:IPR002912~KEGG: L-serine dehydratase%2C iron-sulfur-dependent subunit beta~PFAM: Serine dehydratase beta chain%3B Amino acid-binding ACT~PRIAM: L-serine ammonia-lyase~SPTR: L-serine ammonia-lyase%3B~TIGRFAM: Iron-sulphur-dependent L-serine dehydratase beta subunit~IMG reference gene:2504784681~PFAM: ACT domain%3B Serine dehydratase beta chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1272 Thena_1273 Thena_1273 Thena_1273 1317136 1318527 - amino acid permease-associated region COGs: COG1113 Gamma-aminobutyrate permease and related permease~InterPro IPR004841~KEGG: chy:CHY_2456 amino acid permease~PFAM: Amino acid permease-associated region~SPTR: Amino acid permease%3B~IMG reference gene:2504784682~PFAM: Amino acid permease gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1273 Thena_1274 Thena_1274 Thena_1274 1318550 1319758 - threonine dehydratase COGs: COG1171 Threonine dehydratase~InterPro IPR005789:IPR001926:IPR002912~KEGG: chy:CHY_2459 threonine dehydratase~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit%3B Amino acid-binding ACT~SPTR: Threonine dehydratase%3B~TIGRFAM: Threonine dehydratase II~IMG reference gene:2504784683~PFAM: ACT domain%3B Pyridoxal-phosphate dependent enzyme~TIGRFAM: threonine ammonia-lyase%2C biosynthetic%2C long form%3B threonine dehydratase%2C medium form gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1274 Thena_1275 Thena_1275 Thena_1275 1320161 1321456 + Enolase COGs: COG0148 Enolase~HAMAP: Enolase~InterPro IPR000941:IPR020811:IPR020810~KEGG: hna:Hneap_0970 enolase~PFAM: Enolase%2C C-terminal%3B Enolase%2C N-terminal~PRIAM: Phosphopyruvate hydratase~SPTR: Enolase 2%3B~TIGRFAM: Enolase~IMG reference gene:2504784684~PFAM: Enolase%2C N-terminal domain%3B Enolase%2C C-terminal TIM barrel domain~TIGRFAM: phosphopyruvate hydratase gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1275 Thena_1276 Thena_1276 Thena_1276 1321887 1322873 + tungstate ABC transporter binding protein WtpA COGs: COG0725 ABC-type molybdate transport system periplasmic component~InterPro IPR006059~KEGG: tin:Tint_2167 extracellular solute-binding protein family 1~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Extracellular solute-binding protein family 1%3B~TIGRFAM: tungstate ABC transporter binding protein WtpA~IMG reference gene:2504784685~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: tungstate ABC transporter binding protein WtpA gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1276 Thena_1277 Thena_1277 Thena_1277 1322876 1323694 + ABC-type transporter%2C integral membrane subunit COGs: COG0555 ABC-type sulfate transport system permease component~InterPro IPR000515~KEGG: tin:Tint_2168 binding-protein-dependent transport systems inner membrane component~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~IMG reference gene:2504784686~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1277 Thena_1278 Thena_1278 Thena_1278 1323691 1324779 + Fe(3+)-transporting ATPase COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterPro IPR003593:IPR003439~KEGG: mac:MA0282 sulfate/molybdate ABC transporter%2C ATP-binding protein~PFAM: ABC transporter-like~PRIAM: Fe(3+)-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Sulfate/molybdate ABC transporter%2C ATP-binding protein%3B~IMG reference gene:2504784687~PFAM: ABC transporter gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1278 Thena_1279 Thena_1279 Thena_1279 1324787 1325488 - MgtC/SapB transporter COGs: COG1285 membrane protein~InterPro IPR003416~KEGG: afe:Lferr_0155 MgtC/SapB transporter~PFAM: MgtC/SapB transporter~SPTR: MgtC/SapB transporter%3B~IMG reference gene:2504784688~PFAM: MgtC family gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1279 Thena_1280 Thena_1280 Thena_1280 1325736 1325858 + hypothetical protein KEGG: ddf:DEFDS_1165 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784689 gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1280 Thena_1281 Thena_1281 Thena_1281 1325915 1326295 + ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: ferric-uptake regulator~PFAM: Ferric-uptake regulator~SPTR: Ferric uptake regulator%2C Fur family%3B~IMG reference gene:2504784690~PFAM: Ferric uptake regulator family gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1281 Thena_1282 Thena_1282 Thena_1282 1326297 1326482 + 4-oxalocrotonate tautomerase InterPro IPR004370~KEGG: pth:PTH_1705 hypothetical protein~PFAM: 4-oxalocrotonate tautomerase~SPTR: Uncharacterized protein%2C 4-oxalocrotonate tautomerase homolog%3B~IMG reference gene:2504784691~PFAM: Tautomerase enzyme~TIGRFAM: 4-oxalocrotonate tautomerase family enzyme gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1282 Thena_1283 Thena_1283 Thena_1283 1326482 1327294 + 3-methyl-2-oxobutanoatehydroxymethyltransferase COGs: COG0413 Ketopantoate hydroxymethyltransferase~HAMAP: Ketopantoate hydroxymethyltransferase~InterPro IPR003700~KEGG: tnp:Tnap_1079 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase~PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase%3B~TIGRFAM: Ketopantoate hydroxymethyltransferase~IMG reference gene:2504784692~PFAM: Ketopantoate hydroxymethyltransferase~TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1283 Thena_1284 Thena_1284 Thena_1284 1327280 1327873 - Dephospho-CoA kinase COGs: COG0237 Dephospho-CoA kinase~HAMAP: Dephospho-CoA kinase~InterPro IPR001977~KEGG: dth:DICTH_0730 dephospho-CoA kinase~SPTR: Dephospho-CoA kinase%3B~TIGRFAM: Dephospho-CoA kinase~IMG reference gene:2504784693~PFAM: Dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1284 Thena_1285 Thena_1285 Thena_1285 1327890 1329767 - hypothetical protein IMG reference gene:2504784694 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1285 Thena_1286 Thena_1286 Thena_1286 1329764 1330300 - hypothetical protein IMG reference gene:2504784695 gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1286 Thena_1287 Thena_1287 Thena_1287 1330300 1330860 - hypothetical protein IMG reference gene:2504784696 gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1287 Thena_1288 Thena_1288 Thena_1288 1331050 1331442 - hypothetical protein IMG reference gene:2504784697 gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1288 Thena_1289 Thena_1289 Thena_1289 1331444 1331845 - hypothetical protein IMG reference gene:2504784698 gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1289 Thena_1290 Thena_1290 Thena_1290 1331925 1332542 - copper amine oxidase-like domain-containing protein InterPro IPR012854~KEGG: ttm:Tthe_0999 copper amine oxidase domain protein~PFAM: Copper amine oxidase-like%2C N-terminal~SPTR: Copper amine oxidase domain protein%3B~IMG reference gene:2504784699~PFAM: Copper amine oxidase N-terminal domain gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1290 Thena_1291 Thena_1291 Thena_1291 1332635 1334182 - GMP synthase (glutamine-hydrolyzing) COGs: COG0519 GMP synthase PP-ATPase domain/subunit~HAMAP: GMP synthase [glutamine-hydrolyzing]~InterPro IPR004739:IPR001674:IPR000991:IPR018318~KEGG: tel:tll2418 GMP synthase~PFAM: GMP synthase%2C C-terminal%3B Glutamine amidotransferase class-I%2C C-terminal%3B tRNA methyl transferase-like~PRIAM: GMP synthase (glutamine-hydrolyzing)~SPTR: GMP synthase [glutamine-hydrolyzing]%3B~TIGRFAM: GMP synthase%2C C-terminal%3B GMP synthase%2C N-terminal~IMG reference gene:2504784700~PFAM: GMP synthase C terminal domain%3B Glutamine amidotransferase class-I%3B Asparagine synthase~TIGRFAM: GMP synthase (glutamine-hydrolyzing)%2C C-terminal domain or B subunit%3B GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain or A subunit gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1291 Thena_1292 Thena_1292 Thena_1292 1334182 1335339 - IMP dehydrogenase family protein InterPro IPR005992:IPR001093~KEGG: ava:Ava_2653 inosine 5-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase~SPTR: IMP dehydrogenase related 2%3B~TIGRFAM: IMP dehydrogenase related 2~IMG reference gene:2504784701~PFAM: IMP dehydrogenase / GMP reductase domain~TIGRFAM: IMP dehydrogenase family protein gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1292 Thena_1293 Thena_1293 Thena_1293 1335372 1336217 - NAD-dependent epimerase/dehydratase COGs: COG0702 nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: cni:Calni_0358 nad-dependent epimerase/dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: NAD-dependent epimerase/dehydratase%3B~IMG reference gene:2504784702~PFAM: NAD dependent epimerase/dehydratase family gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1293 Thena_1294 Thena_1294 Thena_1294 1336287 1336754 - cytidyltransferase-related domain protein COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase~InterPro IPR004821:IPR004820~KEGG: lba:Lebu_0323 RfaE bifunctional protein~PFAM: Cytidylyltransferase~SPTR: Glycerol-3-phosphate cytidylyltransferase%3B~TIGRFAM: Cytidyltransferase-related~IMG reference gene:2504784703~PFAM: Cytidylyltransferase~TIGRFAM: rfaE bifunctional protein%2C domain II%3B cytidyltransferase-related domain gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1294 Thena_1295 Thena_1295 Thena_1295 1336808 1337830 - rfaE bifunctional protein COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase~InterPro IPR011913:IPR011611~KEGG: ddf:DEFDS_0511 ADP-heptose synthase~PFAM: Carbohydrate/purine kinase~SPTR: ADP-heptose synthase%3B~TIGRFAM: RfaE bifunctional protein%2C domain I~IMG reference gene:2504784704~PFAM: pfkB family carbohydrate kinase~TIGRFAM: rfaE bifunctional protein%2C domain I gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1295 Thena_1296 Thena_1296 Thena_1296 1337866 1339065 - DegT/DnrJ/EryC1/StrS aminotransferase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653~KEGG: sti:Sthe_2756 glutamine--scyllo-inositol transaminase~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~SPTR: Glutamine--scyllo-inositol transaminase%3B~IMG reference gene:2504784705~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1296 Thena_1297 Thena_1297 Thena_1297 1339114 1340214 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: tte:TTE0658 glycosyltransferase~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase%2C group 1%3B~IMG reference gene:2504784706~PFAM: Glycosyl transferases group 1 gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1297 Thena_1298 Thena_1298 Thena_1298 1340299 1341423 - HtrA2 peptidase COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain~InterPro IPR001478:IPR001254~KEGG: ana:alr5164 serine protease~PFAM: Peptidase S1/S6%2C chymotrypsin/Hap%3B PDZ/DHR/GLGF~PRIAM: HtrA2 peptidase~SMART: PDZ/DHR/GLGF~SPTR: Serine protease%3B~IMG reference gene:2504784707~PFAM: Trypsin%3B PDZ domain (Also known as DHR or GLGF) gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1298 Thena_1299 Thena_1299 Thena_1299 1341507 1345952 - DNA-directed RNA polymerase subunit beta' COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit~HAMAP: DNA-directed RNA polymerase subunit beta'~InterProIPR012754:IPR012756:IPR006592:IPR007080:IPR 000722:IPR007066:IPR007083:IPR007081~KEGG: sus:Acid_5456 DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1%2C domain 1%3B RNA polymerase%2C alpha subunit%3B RNA polymerase Rpb1%2C domain 3%3B RNA polymerase Rpb1%2C domain 4%3B RNA polymerase Rpb1%2C domain 5~SMART: RNA polymerase%2C N-terminal~SPTR: DNA-directed RNA polymerase subunit beta'%3B~TIGRFAM: DNA-directed RNA polymerase%2C subunit beta-prime%3B DNA-directed RNA polymerase%2C subunit beta''~IMG reference gene:2504784708~PFAM: RNA polymerase Rpb1%2C domain 2%3B RNA polymerase Rpb1%2C domain 4%3B RNA polymerase Rpb1%2C domain 1%3B RNA polymerase Rpb1%2C domain 5%3B RNA polymerase Rpb1%2C domain 3~TIGRFAM: DNA-directed RNA polymerase%2C beta'' subunit gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1299 Thena_1300 Thena_1300 Thena_1300 1346009 1349311 - DNA-directed RNA polymerase subunit beta COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit~HAMAP: DNA-directed RNA polymerase subunit beta~InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641~KEGG: gvi:gvip310 DNA-directed RNA polymerase subunit beta~PFAM: DNA-directed RNA polymerase%2C subunit 2%2C domain 6%3B RNA polymerase Rpb2%2C domain 3%3B RNA polymerase%2C beta subunit%2C protrusion%3B RNA polymerase Rpb2%2C domain 2%3B DNA-directed RNA polymerase%2C beta subunit%2C external 1 domain%3B RNA polymerase Rpb2%2C domain 7~SPTR: DNA-directed RNA polymerase subunit beta%3B~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit%2C bacterial-type~IMG reference gene:2504784709~PFAM: RNA polymerase Rpb2%2C domain 3%3B RNA polymerase Rpb2%2C domain 6%3B RNA polymerase beta subunit%3B RNA polymerase beta subunit external 1 domain%3B RNA polymerase Rpb2%2C domain 2%3B RNA polymerase Rpb2%2C domain 7~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1300 Thena_1301 Thena_1301 Thena_1301 1349435 1349602 + sec-independent translocation protein mttA/Hcf106 InterPro IPR003369~PFAM: Bacterial sec-independent translocation protein mttA/Hcf106~IMG reference gene:2504784710~PFAM: mttA/Hcf106 family gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1301 Thena_1302 Thena_1302 Thena_1302 1349842 1351050 - proteinase inhibitor I4 serpin COGs: COG4826 Serine protease inhibitor~InterPro IPR000215~KEGG: npu:Npun_R1539 proteinase inhibitor I4%2C serpin~PFAM: Protease inhibitor I4%2C serpin~SMART: Protease inhibitor I4%2C serpin~SPTR: Proteinase inhibitor I4%2C serpin%3B~IMG reference gene:2504784712~PFAM: Serpin (serine protease inhibitor) gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1302 Thena_1303 Thena_1303 Thena_1303 1351104 1352648 - MORN repeat-containing protein COGs: COG4642 conserved hypothetical protein~InterPro IPR003409~KEGG: tet:TTHERM_00641130 MORN repeat variant family protein~PFAM: MORN motif~SPTR: MORN repeat variant family protein%3B~IMG reference gene:2504784713~PFAM: MORN repeat gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1303 Thena_1304 Thena_1304 Thena_1304 1352688 1353731 - Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR019734:IPR001440:IPR013105~KEGG: fnu:FN1787 TPR repeat-containing protein~PFAM: Tetratricopeptide TPR-1%3B Tetratricopeptide TPR2~SMART: Tetratricopeptide repeat~SPTR: Tetratricopeptide repeat family protein%3B~IMG reference gene:2504784714~PFAM: Tetratricopeptide repeat gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1304 Thena_1305 Thena_1305 Thena_1305 1353851 1354900 + MscS Mechanosensitive ion channel COGs: COG0668 Small-conductance mechanosensitive channel~InterPro IPR006685~KEGG: gsu:GSU2357 hypothetical protein~PFAM: Mechanosensitive ion channel MscS~SPTR: Putative uncharacterized protein%3B~manually curated~IMG reference gene:2504784715~PFAM: Mechanosensitive ion channel gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1305 Thena_1306 Thena_1306 Thena_1306 1355071 1356273 + efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: sul:SYO3AOP1_1133 efflux transporter%2C RND family%2C MFP subunit~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: Secretion protein HlyD~IMG reference gene:2504784716~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1306 Thena_1307 Thena_1307 Thena_1307 1356277 1359360 + acriflavin resistance protein COGs: COG0841 Cation/multidrug efflux pump~InterPro IPR001036~KEGG: sul:SYO3AOP1_1132 acriflavin resistance protein~PFAM: Acriflavin resistance protein~SPTR: Efflux transporter%2C RND superfamily%3B~IMG reference gene:2504784717~PFAM: AcrB/AcrD/AcrF family gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1307 Thena_1308 Thena_1308 Thena_1308 1359465 1360568 + major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: tin:Tint_2891 major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Putative Permease of the major facilitator superfamily%3B~IMG reference gene:2504784718~PFAM: Major Facilitator Superfamily gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1308 Thena_1309 Thena_1309 Thena_1309 1360680 1361849 + Alcohol dehydrogenase COGs: COG1454 Alcohol dehydrogenase class IV~InterPro IPR001670~KEGG: mvn:Mevan_0143 iron-containing alcohol dehydrogenase~PFAM: Alcohol dehydrogenase%2C iron-type~PRIAM: Alcohol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~IMG reference gene:2504784719~PFAM: Iron-containing alcohol dehydrogenase gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1309 Thena_1310 Thena_1310 Thena_1310 1361833 1363569 + diguanylate cyclase with PAS/PAC sensor COGs: COG2199 FOG: GGDEF domain~InterPro IPR000014:IPR000160:IPR001610:IPR013767~KEGG: tjr:TherJR_2660 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold~SMART: Diguanylate cyclase%2C predicted%3B PAS%3B PAC motif~SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784720~PFAM: GGDEF domain%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1310 Thena_1311 Thena_1311 Thena_1311 1363643 1364803 + NLP/P60 protein InterPro IPR000064~KEGG: NLP/P60 protein~PFAM: NLP/P60~SPTR: NLP/P60 protein%3B~manually curated~IMG reference gene:2504784721~PFAM: NlpC/P60 family gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1311 Thena_1312 Thena_1312 Thena_1312 1364822 1365337 + hypothetical protein IMG reference gene:2504784722 gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1312 Thena_1313 Thena_1313 Thena_1313 1365346 1366542 - RNA modification enzyme%2C MiaB family COGs: COG0621 2-methylthioadenine synthetase~InterPro IPR005839:IPR006638:IPR013848:IPR007197~KEGG: ate:Athe_1282 MiaB family RNA modification enzyme~PFAM: Radical SAM%3B Methylthiotransferase%2C N-terminal~SMART: Elongator protein 3/MiaB/NifB~SPTR: MiaB family tRNA modification enzyme%3B~TIGRFAM: Methylthiotransferase~IMG reference gene:2504784723~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: radical SAM methylthiotransferase%2C MiaB/RimO family gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1313 Thena_1314 Thena_1314 Thena_1314 1366529 1367251 - Ribosomal RNA small subunit methyltransferase E COGs: COG1385 conserved hypothetical protein~InterPro IPR006700~KEGG: cyj:Cyan7822_3159 hypothetical protein~PFAM: Ribosomal RNA small subunit methyltransferase E~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Ribosomal RNA small subunit methyltransferase E~IMG reference gene:2504784724~PFAM: RNA methyltransferase~TIGRFAM: RNA methyltransferase%2C RsmE family gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1314 Thena_1315 Thena_1315 Thena_1315 1367251 1368366 - Chaperone protein dnaJ COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~HAMAP: Chaperone protein dnaJ~InterPro IPR001623:IPR001305:IPR002939~KEGG: tte:TTE0956 chaperone protein DnaJ~PFAM: Heat shock protein DnaJ%2C N-terminal%3B Heat shock protein DnaJ%2C cysteine-rich region%3B Chaperone DnaJ%2C C-terminal~SMART: Heat shock protein DnaJ%2C N-terminal~SPTR: Chaperone protein dnaJ%3B~IMG reference gene:2504784725~PFAM: DnaJ C terminal region%3B DnaJ domain%3B DnaJ central domain (4 repeats)~TIGRFAM: chaperone protein DnaJ gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1315 Thena_1316 Thena_1316 Thena_1316 1368363 1369412 - heat-inducible transcription repressor HrcA COGs: COG1420 Transcriptional regulator of heat shock gene~HAMAP: Negative regulator of class I heat shock protein~InterPro IPR002571~KEGG: ttm:Tthe_1183 heat-inducible transcription repressor HrcA~PFAM: Negative regulator of class I heat shock protein~SPTR: Heat-inducible transcription repressor hrcA%3B~TIGRFAM: Negative regulator of class I heat shock protein~IMG reference gene:2504784726~PFAM: HrcA protein C terminal domain~TIGRFAM: heat shock gene repressor HrcA gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1316 Thena_1317 Thena_1317 Thena_1317 1369603 1371276 + Dihydroxy-acid dehydratase COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase~HAMAP: Dihydroxy-acid dehydratase~InterPro IPR004404:IPR000581~KEGG: dth:DICTH_1644 dihydroxy-acid dehydratase~PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase~PRIAM: Dihydroxy-acid dehydratase~SPTR: Dihydroxy-acid dehydratase%3B~TIGRFAM: Dihydroxy-acid dehydratase~IMG reference gene:2504784727~PFAM: Dehydratase family~TIGRFAM: dihydroxy-acid dehydratase gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1317 Thena_1318 Thena_1318 Thena_1318 1371349 1371696 - iojap-like protein COGs: COG0799 Iojap protein~InterPro IPR004394~KEGG: adg:Adeg_0192 iojap-like protein~PFAM: Iojap-related protein~SPTR: Iojap-like protein%3B~TIGRFAM: Iojap-related protein~IMG reference gene:2504784728~PFAM: Domain of unknown function DUF143~TIGRFAM: iojap-like ribosome-associated protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1318 Thena_1319 Thena_1319 Thena_1319 1371683 1372282 - metal dependent phosphohydrolase COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism~InterPro IPR005249:IPR003607:IPR006674~KEGG: tpt:Tpet_1143 metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: Conserved hypothetical protein CHP00488~IMG reference gene:2504784729~PFAM: HD domain~TIGRFAM: putative HD superfamily hydrolase of NAD metabolism%3B uncharacterized domain HDIG gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1319 Thena_1320 Thena_1320 Thena_1320 1372361 1372549 + 50S ribosomal protein L28 COGs: COG0227 Ribosomal protein L28~HAMAP: Ribosomal protein L28~InterPro IPR001383~KEGG: ppd:Ppro_2397 50S ribosomal protein L28~PFAM: Ribosomal protein L28~SPTR: 50S ribosomal protein L28%3B~TIGRFAM: Ribosomal protein L28~IMG reference gene:2504784730~PFAM: Ribosomal L28 family~TIGRFAM: ribosomal protein L28 gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1320 Thena_1321 Thena_1321 Thena_1321 1372565 1373692 - twitching motility protein COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT~InterPro IPR006321:IPR001482~KEGG: aae:aq_745 twitching motility protein PilT~PFAM: Type II secretion system protein E~SPTR: Twitching motility protein PilT%3B~TIGRFAM: Pilus retraction protein PilT~IMG reference gene:2504784731~PFAM: Type II/IV secretion system protein~TIGRFAM: pilus retraction protein PilT gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1321 Thena_1322 Thena_1322 Thena_1322 1373682 1374008 - sulfur relay protein%2C TusE/DsrC/DsvC family COGs: COG2920 Dissimilatory sulfite reductase (desulfoviridin) gamma subunit~InterPro IPR007453~KEGG: dae:Dtox_0077 sulfur relay protein%2C TusE/DsrC/DsvC family~PFAM: DsrC-like protein~SPTR: Sulfur relay protein%2C TusE/DsrC/DsvC family%3B~TIGRFAM: DsrC-like protein~IMG reference gene:2504784732~PFAM: DsrC like protein~TIGRFAM: sulfur relay protein%2C TusE/DsrC/DsvC family gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1322 Thena_1323 Thena_1323 Thena_1323 1374143 1374772 + nitrite and sulphite reductase 4Fe-4S region COGs: COG1251 NAD(P)H-nitrite reductase~InterPro IPR006067~KEGG: tjr:TherJR_2503 nitrite reductase (NAD(P)H)~PFAM: Nitrite/sulphite reductase 4Fe-4S region~SPTR: Nitrite and sulphite reductase 4Fe-4S region%3B~IMG reference gene:2504784733~PFAM: Nitrite and sulphite reductase 4Fe-4S domain gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1323 Thena_1324 Thena_1324 Thena_1324 1374799 1376418 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG0247 Fe-S oxidoreductase~KEGG: pis:Pisl_0176 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~IMG reference gene:2504784734 gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1324 Thena_1325 Thena_1325 Thena_1325 1376393 1377313 - Nitrate reductase gamma subunit COGs: COG2181 Nitrate reductase gamma subunit~InterPro IPR003816~KEGG: tye:THEYE_A1777 hypothetical protein~PFAM: Nitrate reductase%2C gamma subunit~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784735~PFAM: Nitrate reductase gamma subunit gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1325 Thena_1326 Thena_1326 Thena_1326 1377581 1378072 - hydrogenase maturation protease COGs: COG0680 Ni Fe-hydrogenase maturation factor~InterPro IPR000671~KEGG: apo:Arcpr_1548 hydrogenase maturation protease~PFAM: Peptidase A31%2C hydrogen uptake protein~SPTR: Hydrogenase maturation protease%3B~TIGRFAM: Peptidase A31%2C hydrogen uptake protein~IMG reference gene:2504784736~PFAM: Hydrogenase maturation protease~TIGRFAM: hydrogenase maturation protease gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1326 Thena_1327 Thena_1327 Thena_1327 1378098 1379630 - Hydrogen dehydrogenase COGs: COG3259 Coenzyme F420-reducing hydrogenase alpha subunit~InterPro IPR001501~KEGG: tye:THEYE_A1365 F420-non-reducing hydrogenase subunit A%2C selenocysteine-containing~PFAM: Nickel-dependent hydrogenase%2C large subunit~PRIAM: Hydrogen dehydrogenase~SPTR: F420-non-reducing hydrogenase subunit A%2C selenocysteine-containing%3B~IMG reference gene:2504784737~PFAM: Nickel-dependent hydrogenase gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1327 Thena_1328 Thena_1328 Thena_1328 1379723 1380691 - NADH ubiquinone oxidoreductase 20 kDa subunit COGs: COG1941 Coenzyme F420-reducing hydrogenase gamma subunit~InterPro IPR006137~KEGG: apo:Arcpr_1551 NADH ubiquinone oxidoreductase 20 kDa subunit~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~SPTR: F420-non-reducing hydrogenase iron-sulfur subunit G%3B~IMG reference gene:2504784738~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1328 Thena_1329 Thena_1329 Thena_1329 1380691 1381107 - methyl-viologen-reducing hydrogenase delta subunit COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit~InterPro IPR003813~KEGG: tye:THEYE_A1367 methyl viologen-reducing hydrogenase%2C subunit delta~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit~SPTR: Methyl viologen-reducing hydrogenase%2C subunit delta%3B~IMG reference gene:2504784739~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1329 Thena_1330 Thena_1330 Thena_1330 1381130 1382023 - CoB--CoM heterodisulfide reductase COGs: COG2048 Heterodisulfide reductase subunit B~InterPro IPR004017~KEGG: apo:Arcpr_1553 CoB--CoM heterodisulfide reductase~PFAM: Cysteine-rich region%2C CCG~PRIAM: CoB--CoM heterodisulfide reductase~SPTR: Heterodisulfide reductase subunit B-like protein%3B~IMG reference gene:2504784740~PFAM: Cysteine-rich domain gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1330 Thena_1331 Thena_1331 Thena_1331 1382027 1382593 - heterodisulfide reductase subunit C-like protein COGs: COG1150 Heterodisulfide reductase subunit C~KEGG: apo:Arcpr_1554 heterodisulfide reductase subunit C-like protein~SPTR: Heterodisulfide reductase subunit C-like protein%3B~IMG reference gene:2504784741~TIGRFAM: CoB--CoM heterodisulfide reductase%2C subunit C gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1331 Thena_1332 Thena_1332 Thena_1332 1382608 1382886 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR001450~KEGG: tye:THEYE_A1371 CoB--CoM heterodisulfide reductase iron-sulfur subunit A%2C selenocysteine-containing~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: CoB--CoM heterodisulfide reductase iron-sulfur subunit A%2C selenocysteine-containing%3B~IMG reference gene:2504784742~PFAM: 4Fe-4S binding domain gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1332 Thena_1333 Thena_1333 Thena_1333 1382908 1384938 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR006076:IPR001450~KEGG: apo:Arcpr_1555 4Fe-4S ferredoxin iron-sulfur binding domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup%3B FAD dependent oxidoreductase~SPTR: Heterodisulfide reductase subunit A-like protein%3B~IMG reference gene:2504784743~PFAM: 4Fe-4S binding domain gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1333 Thena_1334 Thena_1334 Thena_1334 1385311 1387938 + Valyl-tRNA synthetase COGs: COG0525 Valyl-tRNA synthetase~HAMAP: Valyl-tRNA synthetase~InterPro IPR002303:IPR002300:IPR013155:IPR019499~KEGG: ddf:DEFDS_0507 valyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class Ia%3B Valyl/Leucyl/Isoleucyl-tRNA synthetase%2C class I%2C anticodon-binding%3B Valyl-tRNA synthetase%2C class Ia%2C tRNA binding arm~PRIAM: Valine--tRNA ligase~SPTR: Valyl-tRNA synthetase%3B~TIGRFAM: Valyl-tRNA synthetase%2C class Ia~IMG reference gene:2504784744~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain%3B Valyl tRNA synthetase tRNA binding arm~TIGRFAM: valyl-tRNA synthetase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1334 Thena_1335 Thena_1335 Thena_1335 1387935 1389218 + FolC bifunctional protein COGs: COG0285 Folylpolyglutamate synthase~InterPro IPR001645:IPR013221:IPR004101~KEGG: sul:SYO3AOP1_1510 FolC bifunctional protein~PFAM: Mur ligase%2C C-terminal%3B Mur ligase%2C central~SPTR: FolC bifunctional protein%3B~TIGRFAM: Folylpolyglutamate synthetase~IMG reference gene:2504784745~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1335 Thena_1336 Thena_1336 Thena_1336 1389235 1389591 + protein of unknown function DUF81 InterPro IPR002781~KEGG: cwo:Cwoe_5037 protein of unknown function DUF81~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784746~PFAM: Sulfite exporter TauE/SafE gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1336 Thena_1337 Thena_1337 Thena_1337 1389588 1389938 + protein of unknown function DUF81 InterPro IPR002781~KEGG: tth:TTC0430 putative permease~PFAM: Protein of unknown function DUF81~SPTR: Putative permease%3B~IMG reference gene:2504784747~PFAM: Sulfite exporter TauE/SafE gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1337 Thena_1338 Thena_1338 Thena_1338 1389958 1390323 + protein of unknown function DUF81 InterPro IPR002781~KEGG: cwo:Cwoe_5037 protein of unknown function DUF81~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784748~PFAM: Sulfite exporter TauE/SafE gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1338 Thena_1339 Thena_1339 Thena_1339 1390416 1390868 + 3-dehydroquinate dehydratase COGs: COG0757 3-dehydroquinate dehydratase II~HAMAP: Dehydroquinase%2C class II~InterPro IPR001874~KEGG: ate:Athe_1698 3-dehydroquinate dehydratase~PFAM: Dehydroquinase%2C class II~PRIAM: 3-dehydroquinate dehydratase~SPTR: 3-dehydroquinate dehydratase%3B~TIGRFAM: Dehydroquinase%2C class II~IMG reference gene:2504784749~PFAM: Dehydroquinase class II~TIGRFAM: 3-dehydroquinate dehydratase%2C type II gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1339 Thena_1340 Thena_1340 Thena_1340 1390919 1391221 - tryptophan RNA-binding attenuator protein InterPro IPR000824~KEGG: cth:Cthe_1263 transcription attenuation protein MtrB~PFAM: Tryptophan RNA-binding attenuator protein~SPTR: Tryptophan RNA-binding attenuator protein%3B~IMG reference gene:2504784750~PFAM: Tryptophan RNA-binding attenuator protein gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1340 Thena_1341 Thena_1341 Thena_1341 1391214 1391864 - Histidine biosynthesis bifunctional protein hisIE COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase~HAMAP: Histidine biosynthesis bifunctional protein hisIE~InterPro IPR008179:IPR002496~KEGG: dtu:Dtur_1127 phosphoribosyl-ATP diphosphatase~PFAM: Phosphoribosyl-AMP cyclohydrolase%3B Phosphoribosyl-ATP pyrophosphohydrolase~PRIAM: Phosphoribosyl-AMP cyclohydrolase.%2C Phosphoribosyl-ATP diphosphatase~SPTR: Phosphoribosyl-ATP diphosphatase%3B~TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase~IMG reference gene:2504784751~PFAM: Phosphoribosyl-ATP pyrophosphohydrolase%3B Phosphoribosyl-AMP cyclohydrolase~TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1341 Thena_1342 Thena_1342 Thena_1342 1391861 1392418 - Ribosome-recycling factor COGs: COG0233 Ribosome recycling factor~HAMAP: Ribosome recycling factor%2C bacterial-like~InterPro IPR002661:IPR015998~KEGG: dae:Dtox_3210 ribosome recycling factor~PFAM: Ribosome recycling factor~SPTR: Ribosome-recycling factor%3B~TIGRFAM: Ribosome recycling factor~IMG reference gene:2504784752~PFAM: Ribosome recycling factor~TIGRFAM: ribosome recycling factor gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1342 Thena_1343 Thena_1343 Thena_1343 1392460 1393164 - uridylate kinase COGs: COG0528 Uridylate kinase~InterPro IPR015963:IPR001048~KEGG: uridylate kinase~PFAM: Aspartate/glutamate/uridylate kinase~SPTR: Uridylate kinase%3B~TIGRFAM: Uridylate kinase%2C bacteria~IMG reference gene:2504784753~PFAM: Amino acid kinase family~TIGRFAM: uridylate kinase gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1343 Thena_1344 Thena_1344 Thena_1344 1393187 1393786 - Elongation factor Ts COGs: COG0264 Translation elongation factor Ts~HAMAP: Elongation factor Ts~InterPro IPR001816:IPR000449:IPR014039~KEGG: adg:Adeg_0579 translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B%2C dimerisation%3B Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal~SPTR: Translation elongation factor Ts%3B~TIGRFAM: Translation elongation factor EFTs/EF1B~IMG reference gene:2504784754~PFAM: Elongation factor TS%3B UBA/TS-N domain~TIGRFAM: translation elongation factor Ts gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1344 Thena_1345 Thena_1345 Thena_1345 1393847 1394590 - ribosomal protein S2 COGs: COG0052 Ribosomal protein S2~InterPro IPR005706:IPR001865~KEGG: gmc:GY4MC1_2658 ribosomal protein S2~PFAM: Ribosomal protein S2~SPTR: 30S ribosomal protein S2%3B~TIGRFAM: Ribosomal protein S2%2C bacteria/mitochondria/plastid~IMG reference gene:2504784755~PFAM: Ribosomal protein S2~TIGRFAM: ribosomal protein S2%2C bacterial type gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1345 Thena_1346 Thena_1346 Thena_1346 1394767 1395249 + putative phosphohistidine phosphatase%2C SixA COGs: COG2062 Phosphohistidine phosphatase SixA~InterPro IPR013078~KEGG: afr:AFE_2314 phosphohistidine phosphatase SixA~PFAM: Phosphoglycerate mutase~SPTR: Phosphohistidine phosphatase SixA%3B~IMG reference gene:2504784756~PFAM: Phosphoglycerate mutase family~TIGRFAM: phosphohistidine phosphatase SixA gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1346 Thena_1347 Thena_1347 Thena_1347 1395246 1395431 - Rubredoxin-type Fe(Cys)4 protein InterPro IPR004039~KEGG: rubredoxin-type Fe(Cys)4 protein~PFAM: Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubredoxin-type Fe(Cys)4 protein%3B~IMG reference gene:2504784757~PFAM: Rubredoxin gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1347 Thena_1348 Thena_1348 Thena_1348 1395490 1396248 + hypothetical protein IMG reference gene:2504784758 gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1348 Thena_1349 Thena_1349 Thena_1349 1396328 1398688 + anti-sigma H sporulation factor%2C LonB COGs: COG0466 ATP-dependent Lon protease~InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269~KEGG: chy:CHY_0330 ATP-dependent protease La~PFAM: Peptidase S16%2C lon C-terminal%3B Peptidase S16%2C lon N-terminal%3B ATPase%2C AAA-type%2C core~PRIAM: Endopeptidase La~SMART: Peptidase S16%2C lon N-terminal%3B ATPase%2C AAA+ type%2C core~SPTR: ATP-dependent protease La%3B~TIGRFAM: Peptidase S16%2C ATP-dependent protease La~IMG reference gene:2504784759~PFAM: ATP-dependent protease La (LON) domain%3B ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease La gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1349 Thena_1350 Thena_1350 Thena_1350 1398733 1399665 + TrkA-N domain protein COGs: COG0569 K+ transport systems NAD-binding component~InterPro IPR013099:IPR003148~KEGG: tye:THEYE_A0825 potassium uptake protein%2C TrkA family~PFAM: Regulator of K+ conductance%2C N-terminal%3B Ion transport 2~SPTR: Potassium uptake protein%2C TrkA family%3B~IMG reference gene:2504784760~PFAM: TrkA-N domain%3B Ion channel gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1350 Thena_1351 Thena_1351 Thena_1351 1399806 1400831 + protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: ttm:Tthe_1261 protein of unknown function UPF0118~PFAM: Uncharacterised protein family UPF0118~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784761~PFAM: Domain of unknown function DUF20 gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1351 Thena_1352 Thena_1352 Thena_1352 1400850 1401740 + Polyamine-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: aoe:Clos_0321 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Polyamine-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~IMG reference gene:2504784762~PFAM: ABC transporter gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1352 Thena_1353 Thena_1353 Thena_1353 1401710 1402474 + ABC-2 type transporter InterPro IPR013525~KEGG: dau:Daud_1206 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%3B~IMG reference gene:2504784763~PFAM: ABC-2 type transporter gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1353 Thena_1354 Thena_1354 Thena_1354 1402480 1403457 - Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha COGs: COG0825 Acetyl-CoA carboxylase alpha subunit~HAMAP: Acetyl-CoA carboxylase%2C alpha subunit~InterPro IPR001095:IPR020582~KEGG: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~PFAM: Acetyl-CoA carboxylase%2C alpha subunit%2C conserved region~PRIAM: Acetyl-CoA carboxylase~SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha%3B~TIGRFAM: Acetyl-CoA carboxylase%2C alpha subunit~IMG reference gene:2504784764~PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1354 Thena_1355 Thena_1355 Thena_1355 1403447 1404262 - Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta COGs: COG0777 Acetyl-CoA carboxylase beta subunit~HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta~InterPro IPR000438:IPR000022~KEGG: drm:Dred_2315 acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~PFAM: Carboxyl transferase~PRIAM: Acetyl-CoA carboxylase~SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta%3B~TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase%2C beta subunit~IMG reference gene:2504784765~PFAM: Carboxyl transferase domain~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1355 Thena_1356 Thena_1356 Thena_1356 1404267 1404770 - Protein of unknown function DUF457%2C transmembrane InterPro IPR007404~KEGG: rip:RIEPE_0092 inner membrane protein YdjM~PFAM: Protein of unknown function DUF457%2C transmembrane~SPTR: TcpI%3B~IMG reference gene:2504784766~PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1356 Thena_1357 Thena_1357 Thena_1357 1404767 1407559 - excinuclease ABC%2C A subunit COGs: COG0178 Excinuclease ATPase subunit~InterPro IPR004602:IPR003439~KEGG: dth:DICTH_0732 excinuclease ABC%2C A subunit~PFAM: ABC transporter-like~SPTR: Excinuclease ABC%2C A subunit%3B~TIGRFAM: Excinuclease ABC%2C A subunit~IMG reference gene:2504784767~PFAM: ABC transporter~TIGRFAM: excinuclease ABC%2C A subunit gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1357 Thena_1358 Thena_1358 Thena_1358 1407585 1408184 - nicotinate-nucleotide adenylyltransferase COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase~HAMAP: nicotinate-nucleotide adenylyltransferase~InterPro IPR004821:IPR005248:IPR004820~KEGG: cno:NT01CX_0075 nicotinic acid mononucleotide adenylyltransferase~PFAM: Cytidylyltransferase~SPTR: Probable nicotinate-nucleotide adenylyltransferase%3B~TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase%3B Cytidyltransferase-related~IMG reference gene:2504784768~PFAM: Cytidylyltransferase~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1358 Thena_1359 Thena_1359 Thena_1359 1408165 1409430 - Gamma-glutamyl phosphate reductase COGs: COG0014 Gamma-glutamyl phosphate reductase~HAMAP: Glutamate-5-semialdehyde dehydrogenase~InterPro IPR000965:IPR012134~KEGG: dth:DICTH_1187 gamma-glutamyl phosphate reductase~PRIAM: Glutamate-5-semialdehyde dehydrogenase~SPTR: Gamma-glutamyl phosphate reductase%3B~TIGRFAM: Gamma-glutamyl phosphate reductase GPR~IMG reference gene:2504784769~PFAM: Aldehyde dehydrogenase family~TIGRFAM: gamma-glutamyl phosphate reductase gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1359 Thena_1360 Thena_1360 Thena_1360 1409455 1410537 - Glutamate 5-kinase COGs: COG0263 Glutamate 5-kinase~HAMAP: Glutamate 5-kinase~InterPro IPR005715:IPR002478:IPR001048~KEGG: ttm:Tthe_1291 glutamate 5-kinase~PFAM: Aspartate/glutamate/uridylate kinase%3B Pseudouridine synthase/archaeosine transglycosylase~SMART: Pseudouridine synthase/archaeosine transglycosylase~SPTR: Glutamate 5-kinase%3B~TIGRFAM: Glutamate 5-kinase%2C ProB-related~IMG reference gene:2504784770~PFAM: PUA domain%3B Amino acid kinase family~TIGRFAM: glutamate 5-kinase gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1360 Thena_1361 Thena_1361 Thena_1361 1410583 1411593 - GTPase obg COGs: COG0536 GTPase~HAMAP: GTPase obg~InterPro IPR014100:IPR005225:IPR006169:IPR002917~KEGG: aae:aq_2069 GTPase ObgE~PFAM: GTP1/OBG subdomain%3B GTP-binding protein%2C HSR1-related~SPTR: GTPase obg%3B~TIGRFAM: GTP-binding protein Obg/CgtA%3B Small GTP-binding protein~IMG reference gene:2504784771~PFAM: GTPase of unknown function%3B GTP1/OBG~TIGRFAM: Obg family GTPase CgtA%3B small GTP-binding protein domain gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1361 Thena_1362 Thena_1362 Thena_1362 1411600 1411851 - 50S ribosomal protein L27 COGs: COG0211 Ribosomal protein L27~HAMAP: Ribosomal protein L27~InterPro IPR001684~KEGG: tde:TDE1749 50S ribosomal protein L27~PFAM: Ribosomal protein L27~SPTR: 50S ribosomal protein L27%3B~TIGRFAM: Ribosomal protein L27~IMG reference gene:2504784772~PFAM: Ribosomal L27 protein~TIGRFAM: ribosomal protein L27 gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1362 Thena_1363 Thena_1363 Thena_1363 1411889 1412176 - ribosomal protein L21 InterPro IPR001787~KEGG: sta:STHERM_c10260 50S ribosomal protein L21~PFAM: Ribosomal protein L21~SPTR: 50S ribosomal protein L21%3B~TIGRFAM: Ribosomal protein L21~IMG reference gene:2504784773~PFAM: Ribosomal prokaryotic L21 protein~TIGRFAM: ribosomal protein L21 gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1363 Thena_1364 Thena_1364 Thena_1364 1412461 1412649 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: dak:DaAHT2_1668 4Fe-4S ferredoxin iron-sulfur binding domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504784775~PFAM: 4Fe-4S binding domain gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1364 Thena_1365 Thena_1365 Thena_1365 1412757 1412990 - hypothetical protein KEGG: dhd:Dhaf_0254 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784776 gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1365 Thena_1366 Thena_1366 Thena_1366 1413027 1414085 - sulfite reductase%2C dissimilatory-type beta subunit COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits~InterPro IPR011808:IPR005117:IPR006067:IPR001450~KEGG: chy:CHY_2409 dissimilatory sulfite reductase subunit B~PFAM: Nitrite/sulphite reductase 4Fe-4S region%3B Nitrite/sulphite reductase%2C hemoprotein beta-component%2C ferrodoxin-like%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~PRIAM: Hydrogensulfite reductase~SPTR: Dissimilatory sulfite reductase beta subunit%3B~TIGRFAM: Sulphite reductase%2C dissimilatory-type beta subunit~IMG reference gene:2504784777~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain~TIGRFAM: sulfite reductase%2C dissimilatory-type beta subunit gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1366 Thena_1367 Thena_1367 Thena_1367 1414085 1415275 - sulfite reductase%2C dissimilatory-type alpha subunit COGs: COG2221 Dissimilatory sulfite reductase (desulfoviridin) alpha and beta subunits~InterPro IPR011806:IPR006067~KEGG: chy:CHY_2410 dissimilatory sulfite reductase subunit alpha~PFAM: Nitrite/sulphite reductase 4Fe-4S region~PRIAM: Hydrogensulfite reductase~SPTR: Dissimilatory sulfite reductase alpha subunit%3B~TIGRFAM: Sulphite reductase%2C dissimilatory-type alpha subunit~IMG reference gene:2504784778~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain~TIGRFAM: sulfite reductase%2C dissimilatory-type alpha subunit gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1367 Thena_1368 Thena_1368 Thena_1368 1415349 1415666 - sulfur relay protein%2C TusE/DsrC/DsvC family COGs: COG2920 Dissimilatory sulfite reductase (desulfoviridin) gamma subunit~InterPro IPR007453~KEGG: adg:Adeg_0035 sulfur relay protein%2C TusE/DsrC/DsvC family~PFAM: DsrC-like protein~SPTR: Sulfur relay protein%2C TusE/DsrC/DsvC family%3B~TIGRFAM: DsrC-like protein~IMG reference gene:2504784779~PFAM: DsrC like protein~TIGRFAM: sulfur relay protein%2C TusE/DsrC/DsvC family gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1368 Thena_1369 Thena_1369 Thena_1369 1415713 1417218 - protein of unknown function DUF224 cysteine-rich region domain protein COGs: COG0247 Fe-S oxidoreductase~InterPro IPR004017~KEGG: chy:CHY_2403 putative reductase%2C iron-sulfur cluster-binding subunit~PFAM: Cysteine-rich region%2C CCG~SPTR: Putative reductase%2C iron-sulfur cluster-binding subunit%3B~IMG reference gene:2504784780~PFAM: Cysteine-rich domain gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1369 Thena_1370 Thena_1370 Thena_1370 1417222 1418031 - Nitrate reductase gamma subunit COGs: COG2181 Nitrate reductase gamma subunit~InterPro IPR003816~KEGG: dsy:DSY4518 hypothetical protein~PFAM: Nitrate reductase%2C gamma subunit~SPTR: Nitrate reductase%2C gamma subunit%3B~IMG reference gene:2504784781~PFAM: Nitrate reductase gamma subunit gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1370 Thena_1371 Thena_1371 Thena_1371 1418190 1418915 - PP-loop domain protein COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~InterPro IPR011063~KEGG: hor:Hore_20940 PP-loop domain protein~PFAM: PP-loop~SPTR: PP-loop domain protein%3B~IMG reference gene:2504784782~PFAM: PP-loop family gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1371 Thena_1372 Thena_1372 Thena_1372 1418902 1419915 - tRNA methyl transferase COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain~InterPro IPR018318~KEGG: tye:THEYE_A1631 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~PFAM: tRNA methyl transferase-like~SPTR: tRNA-specific 2-thiouridylase mnmA%3B~IMG reference gene:2504784783~PFAM: tRNA methyl transferase~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1372 Thena_1373 Thena_1373 Thena_1373 1419939 1420250 - thioredoxin COGs: COG3118 Thioredoxin domain-containing protein~InterPro IPR005746:IPR013766~KEGG: thioredoxin~PFAM: Thioredoxin domain~SPTR: Thioredoxin%3B~TIGRFAM: Thioredoxin~IMG reference gene:2504784784~PFAM: Thioredoxin~TIGRFAM: thioredoxin gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1373 Thena_1374 Thena_1374 Thena_1374 1420404 1422668 + 5-methyltetrahydropteroyltriglutamate--homocysteinemethyltransferase COGs: COG0620 Methionine synthase II (cobalamin-independent)~HAMAP:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase~InterPro IPR006276:IPR013215:IPR002629~KEGG: pmx:PERMA_1689 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~PFAM: Methionine synthase%2C vitamin-B12 independent%3B Cobalamin (vitamin B12)-independent methionine synthase MetE%2C N-terminal~PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase~SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase%3B~TIGRFAM:5-methyltetrahydropteroyltriglutamate--homo cysteineS-methyltransferase~IMG reference gene:2504784785~PFAM: Cobalamin-independent synthase%2C N-terminal domain%3B Cobalamin-independent synthase%2C Catalytic domain~TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1374 Thena_1375 Thena_1375 Thena_1375 1422710 1424542 - UvrD/REP helicase COGs: COG0210 Superfamily I DNA and RNA helicase~InterPro IPR000212~KEGG: dth:DICTH_0581 ATP-dependent DNA helicase~PFAM: DNA helicase%2C UvrD/REP type~SPTR: ATP-dependent DNA helicase%3B~IMG reference gene:2504784786~PFAM: UvrD/REP helicase gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1375 Thena_1376 Thena_1376 Thena_1376 1424651 1425085 + pseudogene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1376 Thena_1377 Thena_1377 Thena_1377 1425216 1426475 + Histidyl-tRNA synthetase COGs: COG0124 Histidyl-tRNA synthetase~HAMAP: Histidyl-tRNA synthetase%2C class IIa%2C subgroup~InterPro IPR015807:IPR002314:IPR004154~KEGG: kol:Kole_0376 histidyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved region%3B Anticodon-binding~PRIAM: Histidine--tRNA ligase~SPTR: Histidyl-tRNA synthetase%3B~TIGRFAM: Histidyl-tRNA synthetase%2C class IIa%2C subgroup~IMG reference gene:2504784788~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: histidyl-tRNA synthetase gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1377 Thena_1378 Thena_1378 Thena_1378 1426465 1428237 + aspartyl-tRNA synthetase COGs: COG0173 Aspartyl-tRNA synthetase~InterPro IPR004524:IPR004365:IPR004364:IPR004115~KEGG: dth:DICTH_0824 aspartyl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (D/K/N)%3B Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type%3B GAD domain~PRIAM: Aspartate--tRNA ligase~SPTR: Aspartyl-tRNA synthetase%3B~TIGRFAM: Aspartyl-tRNA synthetase%2C class IIb%2C bacterial/mitochondrial type~IMG reference gene:2504784789~PFAM: GAD domain%3B tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: aspartyl-tRNA synthetase%2C bacterial type gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1378 Thena_1379 Thena_1379 Thena_1379 1428238 1428657 - hypothetical protein SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784790 gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1379 Thena_1380 Thena_1380 Thena_1380 1428895 1429293 - pseudogene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1380 Thena_1381 Thena_1381 Thena_1381 1429630 1430541 + alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073~KEGG: sss:SSUSC84_0287 hydrolase%2C alpha/beta fold family~PFAM: Alpha/beta hydrolase fold-1~SPTR: Hydrolase%3B~IMG reference gene:2504784792~PFAM: alpha/beta hydrolase fold gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1381 Thena_1382 Thena_1382 Thena_1382 1430522 1431118 - Methyltransferase type 12 InterPro IPR013217~KEGG: cki:Calkr_2324 methyltransferase type 11~PFAM: Methyltransferase type 12~SPTR: Methyltransferase type 11%3B~IMG reference gene:2504784793~PFAM: Methyltransferase domain gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1382 Thena_1383 Thena_1383 Thena_1383 1431133 1431879 - Phosphonate-transporting ATPase COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR003593:IPR003439~KEGG: tte:TTE1867 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components%3B~IMG reference gene:2504784794~PFAM: ABC transporter gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1383 Thena_1384 Thena_1384 Thena_1384 1431879 1432928 - ABC-type transporter%2C integral membrane subunit COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: tte:TTE1868 ABC-type cobalamin/Fe3+-siderophores transport systems%2C permease components~PFAM: Bacterial transport system permease protein~SPTR: ABC-type cobalamin/Fe3+-siderophores transport systems%2C permease components%3B~IMG reference gene:2504784795~PFAM: FecCD transport family gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1384 Thena_1385 Thena_1385 Thena_1385 1432934 1434022 - ABC-type transporter%2C periplasmic subunit COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: mvu:Metvu_0975 periplasmic binding protein~PFAM: Periplasmic binding protein~SPTR: Periplasmic binding protein%3B~IMG reference gene:2504784796~PFAM: Periplasmic binding protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1385 Thena_1386 Thena_1386 Thena_1386 1434022 1434777 - cobyrinic acid ac-diamide synthase COGs: COG3640 CO dehydrogenase maturation factor~KEGG: mmz:MmarC7_1780 cobyrinic acid ac-diamide synthase~SPTR: Cobyrinic acid ac-diamide synthase%3B~IMG reference gene:2504784797~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1386 Thena_1387 Thena_1387 Thena_1387 1435018 1435896 + 2-hydroxy-3-oxopropionate reductase COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase~InterPro IPR006115~KEGG: bao:BAMF_1472 putative beta-hydroxyacid dehydrogenase~PFAM: 6-phosphogluconate dehydrogenase%2C NAD-binding~PRIAM: 2-hydroxy-3-oxopropionate reductase~SPTR: Putative beta-hydroxyacid dehydrogenase%3B~IMG reference gene:2504784798~PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1387 Thena_1388 Thena_1388 Thena_1388 1435950 1436600 - polar amino acid ABC transporter%2C inner membrane subunit COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR010065:IPR000515~KEGG: dhd:Dhaf_1045 polar amino acid ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Amino acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine~IMG reference gene:2504784799~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1388 Thena_1389 Thena_1389 Thena_1389 1436597 1437274 - polar amino acid ABC transporter%2C inner membrane subunit COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR010065:IPR000515~KEGG: dsy:DSY4276 hypothetical protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Amino acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine~IMG reference gene:2504784800~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1389 Thena_1390 Thena_1390 Thena_1390 1437274 1438086 - ABC-type transporter%2C periplasmic subunit family 3 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain~InterPro IPR001320:IPR001638~KEGG: dhd:Dhaf_1043 extracellular solute-binding protein family 3~PFAM: Extracellular solute-binding protein%2C family 3~SMART: Extracellular solute-binding protein%2C family 3%3B Ionotropic glutamate receptor~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784801~PFAM: Bacterial extracellular solute-binding proteins%2C family 3 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1390 Thena_1391 Thena_1391 Thena_1391 1438137 1438871 - Phosphonate-transporting ATPase COGs: COG1126 ABC-type polar amino acid transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: dhd:Dhaf_1042 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Phosphonate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~IMG reference gene:2504784802~PFAM: ABC transporter gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1391 Thena_1392 Thena_1392 Thena_1392 1439052 1439330 + regulatory protein ArsR InterPro IPR001845~KEGG: aba:Acid345_0027 ArsR family transcriptional regulator~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Transcriptional regulator%2C ArsR family%3B~IMG reference gene:2504784803~PFAM: Bacterial regulatory protein%2C arsR family gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1392 Thena_1393 Thena_1393 Thena_1393 1439473 1441236 + Xenobiotic-transporting ATPase COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterPro IPR003593:IPR001140:IPR003439~KEGG: vpr:Vpar_0539 ABC transporter related protein~PFAM: ABC transporter-like%3B ABC transporter%2C transmembrane region~PRIAM: Xenobiotic-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~IMG reference gene:2504784804~PFAM: ABC transporter%3B ABC transporter transmembrane region gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1393 Thena_1394 Thena_1394 Thena_1394 1441233 1442528 + Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase~InterPro IPR007507~KEGG: pmx:PERMA_1352 putative bifunctional glycosyltransferase/methyltransferase~PFAM: Three-deoxy-D-manno-octulosonic-acid transferase%2C N-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784805~PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1394 Thena_1395 Thena_1395 Thena_1395 1442515 1443585 + Tetraacyldisaccharide 4'-kinase COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase~HAMAP: Tetraacyldisaccharide 4'-kinase~InterPro IPR003758~KEGG: hor:Hore_18940 tetraacyldisaccharide 4'-kinase~PFAM: Tetraacyldisaccharide 4'-kinase~PRIAM: Tetraacyldisaccharide 4'-kinase~SPTR: Tetraacyldisaccharide 4'-kinase%3B~TIGRFAM: Tetraacyldisaccharide 4'-kinase~IMG reference gene:2504784806~PFAM: Tetraacyldisaccharide-1-P 4'-kinase~TIGRFAM: tetraacyldisaccharide 4'-kinase gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1395 Thena_1396 Thena_1396 Thena_1396 1443578 1444315 + 3-deoxy-manno-octulosonate cytidylyltransferase COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase~HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase~InterPro IPR004528:IPR003329~KEGG: fnu:FN0807 3-deoxy-manno-octulosonate cytidylyltransferase~PFAM: Acylneuraminate cytidylyltransferase~PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase~SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase%3B~TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase~IMG reference gene:2504784807~PFAM: Cytidylyltransferase~TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1396 Thena_1397 Thena_1397 Thena_1397 1444302 1445330 + glycosyl transferase family 9 COGs: COG0859 ADP-heptose:LPS heptosyltransferase~InterPro IPR002201~KEGG: mfe:Mefer_0513 glycosyl transferase family 9~PFAM: Glycosyl transferase%2C family 9~SPTR: Glycosyl transferase family 9%3B~IMG reference gene:2504784808~PFAM: Glycosyltransferase family 9 (heptosyltransferase) gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1397 Thena_1398 Thena_1398 Thena_1398 1445383 1446543 + carboxyl-terminal protease COGs: COG0793 Periplasmic protease~InterPro IPR004447:IPR001478:IPR005151~KEGG: dth:DICTH_0974 carboxyl-terminal protease~PFAM: Peptidase S41%3B PDZ/DHR/GLGF~SMART: Peptidase S41%3B PDZ/DHR/GLGF~SPTR: Carboxyl-terminal protease%3B~TIGRFAM: Peptidase S41A%2C C-terminal protease~IMG reference gene:2504784809~PFAM: Peptidase family S41%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: C-terminal peptidase (prc) gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1398 Thena_1399 Thena_1399 Thena_1399 1446603 1447010 - hypothetical protein KEGG: ava:Ava_3754 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784810 gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1399 Thena_1400 Thena_1400 Thena_1400 1447117 1447575 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG1225 Peroxiredoxin~InterPro IPR000866~KEGG: dth:DICTH_0402 thioredoxin peroxidase~PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B~IMG reference gene:2504784811~PFAM: AhpC/TSA family gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1400 Thena_1401 Thena_1401 Thena_1401 1447612 1448784 - major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: tye:THEYE_A1806 hypothetical protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Conserved protein%3B~IMG reference gene:2504784812~PFAM: Major Facilitator Superfamily gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1401 Thena_1402 Thena_1402 Thena_1402 1448825 1449835 - Glucokinase COGs: COG1940 Transcriptional regulator/sugar kinase~InterPro IPR000600~KEGG: dth:DICTH_0734 glucokinase~PFAM: ROK~PRIAM: Glucokinase~SPTR: Glucokinase%3B~IMG reference gene:2504784813~PFAM: ROK family~TIGRFAM: ROK family protein (putative glucokinase) gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1402 Thena_1403 Thena_1403 Thena_1403 1449921 1450271 + protein of unknown function DUF498 COGs: COG1504 conserved hypothetical protein~InterPro IPR007523~KEGG: tye:THEYE_A0511 hypothetical protein~PFAM: Protein of unknown function DUF498~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784814~PFAM: Protein of unknown function (DUF498/DUF598) gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1403 Thena_1404 Thena_1404 Thena_1404 1450342 1450710 + hypothetical protein InterPro IPR012902~IMG reference gene:2504784815 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1404 Thena_1405 Thena_1405 Thena_1405 1450707 1451300 + hypothetical protein InterPro IPR012902~IMG reference gene:2504784816~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1405 Thena_1406 Thena_1406 Thena_1406 1451290 1452651 + hypothetical protein KEGG: ngr:NAEGRDRAFT_68488 hypothetical protein~SPTR: Predicted protein%3B~IMG reference gene:2504784817 gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1406 Thena_1407 Thena_1407 Thena_1407 1452732 1453190 + hypothetical protein InterPro IPR012902~IMG reference gene:2504784818~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1407 Thena_1408 Thena_1408 Thena_1408 1453187 1453972 + hypothetical protein InterPro IPR012902~IMG reference gene:2504784819~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1408 Thena_1409 Thena_1409 Thena_1409 1453975 1456098 + hypothetical protein IMG reference gene:2504784820 gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1409 Thena_1410 Thena_1410 Thena_1410 1456095 1456445 + hypothetical protein IMG reference gene:2504784821 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1410 Thena_1411 Thena_1411 Thena_1411 1456626 1458713 + TonB-dependent receptor COGs: COG1629 Outer membrane receptor protein mostly Fe transport~InterPro IPR012910:IPR000531~KEGG: ppd:Ppro_1253 TonB-dependent receptor%2C plug~PFAM: TonB-dependent receptor%2C beta-barrel%3B TonB-dependent receptor%2C plug~SPTR: TonB-dependent receptor%2C plug%3B~IMG reference gene:2504784822~PFAM: TonB-dependent Receptor Plug Domain gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1411 Thena_1412 Thena_1412 Thena_1412 1458749 1459159 - Uncharacterized protein family UPF0066 COGs: COG1720 conserved hypothetical protein~InterPro IPR001378~KEGG: tye:THEYE_A1086 hypothetical protein~PFAM: Uncharacterised protein family UPF0066~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0066~IMG reference gene:2504784823~PFAM: Uncharacterised protein family UPF0066~TIGRFAM: putative methyltransferase%2C YaeB/AF_0241 family gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1412 Thena_1413 Thena_1413 Thena_1413 1459216 1459893 - TonB family protein COGs: COG0810 Periplasmic protein TonB links inner and outer membranes~InterPro IPR006260:IPR003538~KEGG: tye:THEYE_A0138 TonB domain protein%2C putative~PFAM: Gram-negative bacterial tonB protein~SPTR: TonB domain protein%2C putative%3B~TIGRFAM: TonB%2C C-terminal~IMG reference gene:2504784824~PFAM: Gram-negative bacterial tonB protein~TIGRFAM: TonB family C-terminal domain gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1413 Thena_1414 Thena_1414 Thena_1414 1459890 1460300 - Biopolymer transport protein ExbD/TolR COGs: COG0848 Biopolymer transport protein~InterPro IPR003400~KEGG: saf:SULAZ_0087 biopolymer transport protein ExbD/TolR~PFAM: Biopolymer transport protein ExbD/TolR~SPTR: Biopolymer transport protein ExbD/TolR%3B~IMG reference gene:2504784825~PFAM: Biopolymer transport protein ExbD/TolR gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1414 Thena_1415 Thena_1415 Thena_1415 1460281 1460796 - MotA/TolQ/ExbB proton channel COGs: COG0811 Biopolymer transport protein~InterPro IPR002898~KEGG: sul:SYO3AOP1_1370 MotA/TolQ/ExbB proton channel~PFAM: MotA/TolQ/ExbB proton channel~SPTR: MotA/TolQ/ExbB proton channel%3B~IMG reference gene:2504784826~PFAM: MotA/TolQ/ExbB proton channel family~TIGRFAM: tonB-system energizer ExbB%2C group 2 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1415 Thena_1416 Thena_1416 Thena_1416 1460941 1461615 + hypothetical protein IMG reference gene:2504784827 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1416 Thena_1417 Thena_1417 Thena_1417 1461650 1462153 + putative transcriptional regulator%2C AsnC family COGs: COG1522 Transcriptional regulators~InterPro IPR019888~KEGG: drm:Dred_2157 AsnC family transcriptional regulator~SMART: Transcription regulator%2C AsnC-type~SPTR: Putative transcriptional regulator%2C AsnC family%3B~IMG reference gene:2504784828 gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1417 Thena_1418 Thena_1418 Thena_1418 1462171 1463454 + Glutamate-1-semialdehyde 2%2C1-aminomutase COGs: COG0001 Glutamate-1-semialdehyde aminotransferase~HAMAP: Glutamate-1-semialdehyde 2%2C1-aminomutase~InterPro IPR004639:IPR005814~KEGG: tmt:Tmath_0437 glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: Aminotransferase class-III~PRIAM: Glutamate-1-semialdehyde 2%2C1-aminomutase~SPTR: Glutamate-1-semialdehyde 2%2C1-aminomutase%3B~TIGRFAM: Tetrapyrrole biosynthesis%2C glutamate-1-semialdehyde aminotransferase~IMG reference gene:2504784829~PFAM: Aminotransferase class-III~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1418 Thena_1419 Thena_1419 Thena_1419 1463581 1464291 + metallophosphoesterase InterPro IPR004843~KEGG: iho:Igni_0238 hypothetical protein~PFAM: Metallophosphoesterase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784830~PFAM: Calcineurin-like phosphoesterase gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1419 Thena_1420 Thena_1420 Thena_1420 1464275 1465162 + cysteine synthase COGs: COG0031 Cysteine synthase~InterPro IPR005856:IPR001926~KEGG: dth:DICTH_1733 cysteine synthase A~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Cysteine synthase~SPTR: Cysteine synthase A%3B~TIGRFAM: Cysteine synthase K/M~IMG reference gene:2504784831~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1420 Thena_1421 Thena_1421 Thena_1421 1465155 1466129 + protein of unknown function DUF814 COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain~KEGG: dtu:Dtur_1496 protein of unknown function DUF814~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784832~PFAM: Thiamine biosynthesis protein (ThiI) gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1421 Thena_1422 Thena_1422 Thena_1422 1466404 1466727 - hypothetical protein IMG reference gene:2504784833 gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1422 Thena_1423 Thena_1423 Thena_1423 1466794 1468371 - ABC-type transporter%2C periplasmic subunit COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR006311:IPR000914~KEGG: tye:THEYE_A1146 oligopeptide-binding protein AppA~PFAM: Bacterial extracellular solute-binding protein%2C family 5~SPTR: Oligopeptide-binding protein AppA%3B~IMG reference gene:2504784834~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1423 Thena_1424 Thena_1424 Thena_1424 1468477 1469535 + Malate dehydrogenase COGs: COG2055 Malate/L-lactate dehydrogenase~InterPro IPR003767~KEGG: ttr:Tter_0410 malate/L-lactate dehydrogenase~PFAM: Malate/L-lactate dehydrogenase~PRIAM: Malate dehydrogenase~SPTR: Malate/L-lactate dehydrogenase%3B~IMG reference gene:2504784835~PFAM: Malate/L-lactate dehydrogenase gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1424 Thena_1425 Thena_1425 Thena_1425 1469593 1470654 - DRTGG domain protein COGs: COG0857 BioD-like N-terminal domain of phosphotransacetylase~InterPro IPR010766~KEGG: mbu:Mbur_1346 cobyrinic acid ac-diamide synthase~PFAM: DRTGG~SPTR: Protein with DRTGG domain%3B~IMG reference gene:2504784836~PFAM: DRTGG domain%3B CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1425 Thena_1426 Thena_1426 Thena_1426 1470651 1472759 - acetyl coenzyme A synthetase (ADP forming)%2C alpha domain protein COGs: COG1042 Acyl-CoA synthetase (NDP forming)~InterPro IPR014089:IPR003781~KEGG: cag:Cagg_3834 acetyl coenzyme A synthetase (ADP forming)%2C alpha domain-containing protein~PFAM: CoA-binding~SPTR: Strongly similar to acetyl-CoA synthetase (ADP-forming) gene%3B~TIGRFAM: Acetyl coenzyme A synthetase (ADP forming)%2C alpha domain~IMG reference gene:2504784837~PFAM: CoA binding domain~TIGRFAM: acetyl coenzyme A synthetase (ADP forming)%2C alpha domain gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1426 Thena_1427 Thena_1427 Thena_1427 1472810 1474051 - D-lactate dehydrogenase (cytochrome) COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094:IPR004113~KEGG: chy:CHY_0432 putative glycolate oxidase%2C GlcD subunit~PFAM: FAD linked oxidase%2C N-terminal%3B FAD-linked oxidase%2C C-terminal~PRIAM: D-lactate dehydrogenase (cytochrome)~SPTR: Putative glycolate oxidase%2C GlcD subunit%3B~IMG reference gene:2504784838~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1427 Thena_1428 Thena_1428 Thena_1428 1474100 1475407 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG0247 Fe-S oxidoreductase~InterPro IPR001450:IPR004017~KEGG: aar:Acear_1800 protein of unknown function DUF224 cysteine-rich region domain protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup%3B Cysteine-rich region%2C CCG~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784839~PFAM: Cysteine-rich domain gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1428 Thena_1429 Thena_1429 Thena_1429 1475394 1476800 - D-lactate dehydrogenase (cytochrome) COGs: COG0277 FAD/FMN-containing dehydrogenase~InterPro IPR006094:IPR004113~KEGG: dhd:Dhaf_4518 FAD linked oxidase domain protein~PFAM: FAD-linked oxidase%2C C-terminal%3B FAD linked oxidase%2C N-terminal~PRIAM: D-lactate dehydrogenase (cytochrome)~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784840~PFAM: FAD binding domain%3B FAD linked oxidases%2C C-terminal domain~TIGRFAM: glycolate oxidase%2C subunit GlcD gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1429 Thena_1430 Thena_1430 Thena_1430 1477010 1477699 - ubiquinone/menaquinone biosynthesis methyltransferase COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR004033:IPR013216~KEGG: wpi:WPa_1222 ubiquinone/menaquinone biosynthesis methlytransferase UbiE~PFAM: Methyltransferase type 11~SPTR: Ubiquinone/menaquinone biosynthesis methyltransferase ubiE%3B~TIGRFAM: UbiE/COQ5 methyltransferase~IMG reference gene:2504784841~PFAM: ubiE/COQ5 methyltransferase family~TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1430 Thena_1431 Thena_1431 Thena_1431 1477701 1478945 - 3-oxoacyl-(acyl-carrier-protein) synthase 2 COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase~InterPro IPR017568:IPR014030:IPR014031~KEGG: tte:TTE1470 3-oxoacyl-(acyl-carrier-protein) synthase~PFAM: Beta-ketoacyl synthase%2C N-terminal%3B Beta-ketoacyl synthase%2C C-terminal~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II~SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase%3B~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~IMG reference gene:2504784842~PFAM: Beta-ketoacyl synthase%2C N-terminal domain%3B Beta-ketoacyl synthase%2C C-terminal domain~TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1431 Thena_1432 Thena_1432 Thena_1432 1478942 1479907 - 2-nitropropane dioxygenase NPD COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase~InterPro IPR004136~KEGG: drm:Dred_2913 2-nitropropane dioxygenase%2C NPD~PFAM: 2-nitropropane dioxygenase%2C NPD~SPTR: 2-nitropropane dioxygenase%2C NPD%3B~IMG reference gene:2504784843~PFAM: 2-nitropropane dioxygenase gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1432 Thena_1433 Thena_1433 Thena_1433 1479979 1480224 - Acyl carrier protein COGs: COG0236 Acyl carrier protein~HAMAP: Acyl carrier protein (ACP)~InterPro IPR003231:IPR006163~KEGG: drm:Dred_2071 acyl carrier protein~PFAM: Phosphopantetheine-binding~SPTR: Acyl carrier protein%3B~TIGRFAM: Acyl carrier protein (ACP)~IMG reference gene:2504784844~PFAM: Phosphopantetheine attachment site~TIGRFAM: acyl carrier protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1433 Thena_1434 Thena_1434 Thena_1434 1480246 1480983 - 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR011284:IPR002198~KEGG: cob:COB47_1376 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: Short-chain dehydrogenase/reductase SDR~SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase%3B~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~IMG reference gene:2504784845~PFAM: short chain dehydrogenase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1434 Thena_1435 Thena_1435 Thena_1435 1480990 1481880 - (Acyl-carrier-protein) S-malonyltransferase COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase~InterPro IPR014043~KEGG: has:Halsa_1106 malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase~PRIAM: [Acyl-carrier-protein] S-malonyltransferase~SPTR: Malonyl CoA-acyl carrier protein transacylase%3B~IMG reference gene:2504784846~PFAM: Acyl transferase domain~TIGRFAM: malonyl CoA-acyl carrier protein transacylase gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1435 Thena_1436 Thena_1436 Thena_1436 1481877 1482857 - 3-oxoacyl-(acyl-carrier-protein) synthase 3 COGs: COG0332 3-oxoacyl-(acyl-carrier-protein)~HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH)~InterPro IPR004655:IPR013751:IPR013747~KEGG: tte:TTE1475 3-oxoacyl-(acyl carrier protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III~SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase III%3B~TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH)~IMG reference gene:2504784847~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1436 Thena_1437 Thena_1437 Thena_1437 1482847 1483842 - Phosphate acyltransferase COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme~HAMAP: Phospholipid biosynthesis protein%2C PlsX like~InterPro IPR012281:IPR003664~KEGG: hor:Hore_10250 phosphate acyl-(acyl carrier protein) acyltransferase~PFAM: Fatty acid synthesis plsX protein~SPTR: Phosphate acyltransferase%3B~TIGRFAM: Phospholipid biosynthesis protein%2C PlsX like~IMG reference gene:2504784848~PFAM: Fatty acid synthesis protein~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1437 Thena_1438 Thena_1438 Thena_1438 1483865 1484062 - 50S ribosomal protein L32 HAMAP: Ribosomal protein L32p~InterPro IPR002677~KEGG: sth:STH1443 50S ribosomal protein L32~PFAM: Ribosomal protein L32p~SPTR: 50S ribosomal protein L32%3B~TIGRFAM: Ribosomal protein L32p~IMG reference gene:2504784849~PFAM: Ribosomal L32p protein family~TIGRFAM: ribosomal protein L32 gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1438 Thena_1439 Thena_1439 Thena_1439 1484034 1484459 - protein of unknown function DUF177 InterPro IPR003772~KEGG: cth:Cthe_1027 hypothetical protein~PFAM: Protein of unknown function DUF177~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784850~PFAM: Uncharacterized ACR%2C COG1399 gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1439 Thena_1440 Thena_1440 Thena_1440 1484519 1484968 - MOSC domain containing protein COGs: COG2258 conserved hypothetical protein~KEGG: kol:Kole_0698 MOSC domain containing protein~SPTR: MOSC domain containing protein%3B~IMG reference gene:2504784851~PFAM: MOSC domain gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1440 Thena_1441 Thena_1441 Thena_1441 1485138 1486406 + Ste24 endopeptidase COGs: COG0501 Zn-dependent protease with chaperone function~InterPro IPR001915~KEGG: ddf:DEFDS_1961 peptidase M48 family~PFAM: Peptidase M48%2C Ste24p~PRIAM: Ste24 endopeptidase~SPTR: Peptidase%2C M48 family%3B~IMG reference gene:2504784852~PFAM: Peptidase family M48 gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1441 Thena_1442 Thena_1442 Thena_1442 1486403 1486504 - pseudogene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1442 Thena_1443 Thena_1443 Thena_1443 1486571 1489276 - diguanylate cyclase with PAS/PAC and GAF sensors COGs: COG2199 FOG: GGDEF domain~InterPro IPR000014:IPR000160:IPR013767:IPR003018~KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~PFAM: Diguanylate cyclase%2C predicted%3B PAS fold%3B GAF~SMART: Diguanylate cyclase%2C predicted~SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S)%3B~TIGRFAM: Diguanylate cyclase%2C predicted%3B PAS~IMG reference gene:2504784854~PFAM: GGDEF domain%3B MASE1%3B PAS fold~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1443 Thena_1444 Thena_1444 Thena_1444 1489346 1491625 - Acylphosphatase COGs: COG0068 Hydrogenase maturation factor~HAMAP: Acylphosphatase~InterPro IPR004421:IPR001792:IPR011125:IPR006070~KEGG: tjr:TherJR_1300 (NiFe) hydrogenase maturation protein HypF~PFAM: Sua5/YciO/YrdC%2C N-terminal%3B Acylphosphatase-like%3B Zinc finger%2C HypF-type~SPTR: (NiFe) hydrogenase maturation protein HypF%3B~TIGRFAM: Hydrogenase maturation factor%2C HypF-type~IMG reference gene:2504784855~PFAM: HypF finger%3B yrdC domain%3B Glycoprotease family%3B Acylphosphatase~TIGRFAM: [NiFe] hydrogenase maturation protein HypF gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1444 Thena_1445 Thena_1445 Thena_1445 1491878 1493467 - amino acid permease-associated region COGs: COG0531 Amino acid transporter~InterPro IPR004841~KEGG: aac:Aaci_1000 amino acid permease-associated region~PFAM: Amino acid permease-associated region~SPTR: Amino acid permease-associated region%3B~IMG reference gene:2504784856~PFAM: Amino acid permease gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1445 Thena_1446 Thena_1446 Thena_1446 1493691 1494983 - major facilitator superfamily MFS_1 COGs: COG2271 Sugar phosphate permease~InterPro IPR011701~KEGG: aac:Aaci_2495 major facilitator superfamily MFS_1~PFAM: Major facilitator superfamily MFS-1~SPTR: Major facilitator superfamily MFS_1%3B~IMG reference gene:2504784857~PFAM: Major Facilitator Superfamily gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1446 Thena_1447 Thena_1447 Thena_1447 1495490 1497121 - S-layer domain-containing protein InterPro IPR001119~KEGG: vpr:Vpar_0227 S-layer domain protein~PFAM: S-layer homology region~SPTR: S-layer domain protein domain protein%3B~IMG reference gene:2504784858~PFAM: Protein of unknown function (DUF3373)%3B S-layer homology domain gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1447 Thena_1448 Thena_1448 Thena_1448 1497358 1498173 - pseudogene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1448 Thena_1449 Thena_1449 Thena_1449 1498389 1499648 - natural resistance-associated macrophage protein COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family~InterPro IPR001046~KEGG: natural resistance-associated macrophage protein~PFAM: Natural resistance-associated macrophage protein~SPTR: Natural resistance-associated macrophage protein%3B~IMG reference gene:2504784860~PFAM: Natural resistance-associated macrophage protein~TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1449 Thena_1450 Thena_1450 Thena_1450 1499653 1500624 - O-sialoglycoprotein endopeptidase COGs: COG0533 Metal-dependent protease with possible chaperone activity~HAMAP: O-sialoglycoprotein endopeptidase~InterPro IPR017861:IPR000905~KEGG: chy:CHY_0725 O-sialoglycoprotein endopeptidase~PFAM: Peptidase M22%2C glycoprotease~PRIAM: O-sialoglycoprotein endopeptidase~SPTR: Probable O-sialoglycoprotein endopeptidase%3B~TIGRFAM: putative glycoprotease GCP%3B Peptidase M22%2C glycoprotease%2C subgroup~IMG reference gene:2504784861~PFAM: Glycoprotease family~TIGRFAM: putative glycoprotease GCP%3B metallohydrolase%2C glycoprotease/Kae1 family gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1450 Thena_1451 Thena_1451 Thena_1451 1500640 1501944 - Phenylacetate--CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: adg:Adeg_0166 phenylacetate--CoA ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: Phenylacetate--CoA ligase%3B~IMG reference gene:2504784862~PFAM: AMP-binding enzyme gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1451 Thena_1452 Thena_1452 Thena_1452 1501968 1502396 - amino acid-binding ACT domain protein COGs: COG4747 ACT domain-containing protein~InterPro IPR002912~KEGG: dvl:Dvul_1522 amino acid-binding ACT domain-containing protein~PFAM: Amino acid-binding ACT~SPTR: ACT domain protein%3B~IMG reference gene:2504784863~PFAM: ACT domain gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1452 Thena_1453 Thena_1453 Thena_1453 1502432 1503007 - Indolepyruvate ferredoxin oxidoreductase COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: swo:Swol_1195 indolepyruvate oxidoreductase subunit beta~PFAM: Pyruvate/ketoisovalerate oxidoreductase~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784864~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C beta subunit gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1453 Thena_1454 Thena_1454 Thena_1454 1503038 1504768 - indolepyruvate ferredoxin oxidoreductase%2C alpha subunit COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits~InterPro IPR017721:IPR002880:IPR011766:IPR001450~KEGG: dae:Dtox_0045 indolepyruvate ferredoxin oxidoreductase%2C alpha subunit~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP-binding%3B Pyruvate flavodoxin/ferredoxin oxidoreductase%2C N-terminal%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Indolepyruvate ferredoxin oxidoreductase%2C alpha subunit%3B~TIGRFAM: Indolepyruvate ferredoxin oxidoreductase%2C alpha subunit~IMG reference gene:2504784865~PFAM: domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C alpha subunit gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1454 Thena_1455 Thena_1455 Thena_1455 1504803 1506110 - Phenylacetate--CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: adg:Adeg_0166 phenylacetate--CoA ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: Phenylacetate--CoA ligase%3B~IMG reference gene:2504784866~PFAM: AMP-binding enzyme gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1455 Thena_1456 Thena_1456 Thena_1456 1506252 1506617 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein InterPro IPR001450~KEGG: dol:Dole_2635 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~IMG reference gene:2504784867 gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1456 Thena_1457 Thena_1457 Thena_1457 1506708 1507589 + beta-lactamase domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: msv:Mesil_1530 beta-lactamase domain protein~SPTR: Beta-lactamase domain protein%3B~IMG reference gene:2504784868~PFAM: Metallo-beta-lactamase superfamily gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1457 Thena_1458 Thena_1458 Thena_1458 1507613 1508605 - hypothetical protein KEGG: saf:SULAZ_0136 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784869~PFAM: Putative transposase%2C YhgA-like~TIGRFAM: conserved hypothetical protein (putative transposase or invertase) gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1458 Thena_1459 Thena_1459 Thena_1459 1508670 1511912 + helicase domain-containing protein COGs: COG0513 Superfamily II DNA and RNA helicase~InterPro IPR014001:IPR001650:IPR006935~KEGG: aco:Amico_1337 helicase domain protein~PFAM: DNA/RNA helicase%2C C-terminal%3B Restriction endonuclease%2C type I%2C R subunit/Type III%2C Res subunit~SMART: DNA/RNA helicase%2C C-terminal%3B DEAD-like helicase%2C N-terminal~SPTR: Helicase domain protein%3B~IMG reference gene:2504784870~PFAM: Helicase conserved C-terminal domain%3B SNF2 family N-terminal domain gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1459 Thena_1460 Thena_1460 Thena_1460 1511909 1515235 + hypothetical protein KEGG: pmo:Pmob_1534 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784871~PFAM: Eco57I restriction endonuclease gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1460 Thena_1461 Thena_1461 Thena_1461 1515240 1516277 + pseudogene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1461 Thena_1462 Thena_1462 Thena_1462 1516662 1517141 + MORN repeat-containing protein InterPro IPR003409~KEGG: meh:M301_1949 hypothetical protein~PFAM: MORN motif~SMART: MORN motif~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784873~PFAM: MORN repeat gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1462 Thena_1463 Thena_1463 Thena_1463 1517504 1517656 - hypothetical protein IMG reference gene:2504784874 gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1463 Thena_1464 Thena_1464 Thena_1464 1517808 1518179 + Propeptide PepSY amd peptidase M4 InterPro IPR005075~KEGG: cni:Calni_0143 propeptide PepSY amd peptidase M4~PFAM: Peptidase M4%2C propeptide%2C PepSY~SPTR: Propeptide PepSY amd peptidase M4%3B~IMG reference gene:2504784875~PFAM: Peptidase propeptide and YPEB domain gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1464 Thena_1465 Thena_1465 Thena_1465 1518253 1518930 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: cni:Calni_0142 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver region%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver region~SPTR: Two component transcriptional regulator%2C winged helix family%3B~IMG reference gene:2504784876~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1465 Thena_1466 Thena_1466 Thena_1466 1518927 1520252 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661:IPR003594:IPR003660~KEGG: cni:Calni_0141 integral membrane sensor signal transduction histidine kinase~PFAM: ATP-binding region%2C ATPase-like%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor region%3B HAMP linker domain~SMART: ATP-binding region%2C ATPase-like%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor region~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~IMG reference gene:2504784877~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1466 Thena_1467 Thena_1467 Thena_1467 1520463 1521314 + DNA adenine methylase COGs: COG0338 Site-specific DNA methylase~InterPro IPR012326:IPR012327~KEGG: bcy:Bcer98_3991 DNA adenine methylase~PFAM: D12 class N6 adenine-specific DNA methyltransferase~SPTR: Modification methylase lladchia%3B~TIGRFAM: DNA adenine methylase~IMG reference gene:2504784878~PFAM: D12 class N6 adenine-specific DNA methyltransferase~TIGRFAM: DNA adenine methylase (dam) gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1467 Thena_1468 Thena_1468 Thena_1468 1521329 1521979 - Radical SAM domain protein COGs: COG0602 Organic radical activating protein~InterPro IPR007197~KEGG: mpi:Mpet_0607 radical SAM domain-containing protein~PFAM: Radical SAM~SPTR: Radical SAM domain protein%3B~IMG reference gene:2504784879~PFAM: Radical SAM superfamily gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1468 Thena_1469 Thena_1469 Thena_1469 1521979 1522335 - queuosine biosynthesis protein QueD COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase~InterPro IPR007115~KEGG: tpt:Tpet_0885 putative 6-pyruvoyl tetrahydropterin synthase~PFAM: 6-pyruvoyl tetrahydropterin synthase-related~SPTR: Putative uncharacterized protein%3B~TIGRFAM: queuosine biosynthesis protein QueD~IMG reference gene:2504784880~PFAM: 6-pyruvoyl tetrahydropterin synthase~TIGRFAM: queuosine biosynthesis protein QueD%3B 6-pyruvoyl tetrahydropterin synthase/QueD family protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1469 Thena_1470 Thena_1470 Thena_1470 1522389 1523255 - protein of unknown function DUF89 COGs: COG1578 conserved hypothetical protein~InterPro IPR002791~KEGG: kcr:Kcr_0319 hypothetical protein~PFAM: Domain of unknown function DUF89~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784881~PFAM: Protein of unknown function DUF89 gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1470 Thena_1471 Thena_1471 Thena_1471 1523239 1523604 - hypothetical protein KEGG: hya:HY04AAS1_0581 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784882 gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1471 Thena_1472 Thena_1472 Thena_1472 1523633 1524331 - protein of unknown function UPF0005 COGs: COG0670 Integral membrane protein interacts with FtsH~InterPro IPR006214~KEGG: dat:HRM2_25640 putative cold-shock inducible membrane protein~PFAM: Uncharacterised protein family UPF0005~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784883~PFAM: Uncharacterised protein family UPF0005 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1472 Thena_1473 Thena_1473 Thena_1473 1524457 1524687 - hypothetical protein IMG reference gene:2504784884 gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1473 Thena_1474 Thena_1474 Thena_1474 1524778 1525038 - hypothetical protein IMG reference gene:2504784885 gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1474 Thena_1475 Thena_1475 Thena_1475 1525053 1526555 - uroporphyrin-III C-methyltransferase COGs: COG0007 Uroporphyrinogen-III methylase~InterPro IPR006366:IPR000878:IPR003754~KEGG: slp:Slip_1426 uroporphyrin-III C-methyltransferase~PFAM: Tetrapyrrole methylase%3B Tetrapyrrole biosynthesis%2C uroporphyrinogen III synthase~PRIAM: Uroporphyrinogen-III C-methyltransferase.%2C Uroporphyrinogen-III synthase~SPTR: Uroporphyrin-III C-methyltransferase%3B~TIGRFAM: Uroporphyrin-III C-methyltransferase%2C C-terminal~IMG reference gene:2504784886~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases%3B Uroporphyrinogen-III synthase HemD~TIGRFAM: uroporphyrin-III C-methyltransferase gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1475 Thena_1476 Thena_1476 Thena_1476 1526575 1527147 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase~InterPro IPR004507:IPR003382~KEGG: mfe:Mefer_0353 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: Flavoprotein~SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase%3B~TIGRFAM: Phenylacrylic acid decarboxylase~IMG reference gene:2504784887~PFAM: Flavoprotein~TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1476 Thena_1477 Thena_1477 Thena_1477 1527168 1528016 - 4-hydroxybenzoate polyprenyltransferase COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase~InterPro IPR006371:IPR000537~KEGG: tye:THEYE_A1214 4-hydroxybenzoate polyprenyltransferase%2C putative~PFAM: UbiA prenyltransferase~SPTR: 4-hydroxybenzoate polyprenyltransferase%2C putative%3B~TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related~IMG reference gene:2504784888~PFAM: UbiA prenyltransferase family~TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1477 Thena_1478 Thena_1478 Thena_1478 1528060 1529511 - menaquinone biosynthesis decarboxylase%2C SCO4490 family COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase~InterPro IPR002830~KEGG: hor:Hore_14820 UbiD family decarboxylase~PFAM: Carboxylyase-related~SPTR: UbiD family decarboxylase%3B~TIGRFAM: menaquinone biosynthesis decarboxylase%2C SCO4490 family%3B Carboxylyase-related~IMG reference gene:2504784889~PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~TIGRFAM: menaquinone biosynthesis decarboxylase%2C SCO4490 family%3B UbiD family decarboxylases gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1478 Thena_1479 Thena_1479 Thena_1479 1529585 1530013 - UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: dae:Dtox_3816 UspA domain protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504784890~PFAM: Universal stress protein family gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1479 Thena_1480 Thena_1480 Thena_1480 1530036 1530239 - hypothetical protein IMG reference gene:2504784891 gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1480 Thena_1481 Thena_1481 Thena_1481 1530276 1530380 - hypothetical protein IMG reference gene:2504784892 gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1481 Thena_1482 Thena_1482 Thena_1482 1530460 1531119 - phosphate uptake regulator%2C PhoU COGs: COG0704 Phosphate uptake regulator~InterPro IPR008170~KEGG: tal:Thal_0022 phosphate uptake regulator%2C PhoU~PFAM: PhoU~SPTR: Transcriptional regulator (PhoU-like) protein%3B~TIGRFAM: PhoU~IMG reference gene:2504784893~PFAM: PhoU domain~TIGRFAM: phosphate transport system regulatory protein PhoU gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1482 Thena_1483 Thena_1483 Thena_1483 1531137 1531889 - phosphate ABC transporter%2C ATPase subunit COGs: COG1117 ABC-type phosphate transport system ATPase component~InterPro IPR005670:IPR003593:IPR003439~KEGG: dtu:Dtur_0477 phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter-like~PRIAM: Phosphate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: Phosphate ABC transporter%2C ATPase subunit%3B~TIGRFAM: Phosphate transport system permease protein 1~IMG reference gene:2504784894~PFAM: ABC transporter~TIGRFAM: phosphate ABC transporter%2C ATP-binding protein gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1483 Thena_1484 Thena_1484 Thena_1484 1531899 1532717 - phosphate ABC transporter%2C inner membrane subunit PstA COGs: COG0581 ABC-type phosphate transport system permease component~InterPro IPR005672:IPR000515~KEGG: gem:GM21_2504 phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Phosphate ABC transporter%2C inner membrane subunit PstA%3B~TIGRFAM: Phosphate transport system permease protein 2~IMG reference gene:2504784895~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstA gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1484 Thena_1485 Thena_1485 Thena_1485 1532719 1533660 - phosphate ABC transporter%2C inner membrane subunit PstC COGs: COG0573 ABC-type phosphate transport system permease component~InterPro IPR011864:IPR000515~KEGG: saf:SULAZ_1290 phosphate ABC transporter%2C permease protein PstC~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Phosphate ABC transporter%2C inner membrane subunit PstC%3B~TIGRFAM: Phosphate ABC transporter%2C permease protein PstC~IMG reference gene:2504784896~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstC gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1485 Thena_1486 Thena_1486 Thena_1486 1533873 1534661 - Dihydrodipicolinate reductase COGs: COG0289 Dihydrodipicolinate reductase~HAMAP: Dihydrodipicolinate reductase~InterPro IPR011770:IPR000846~KEGG: tjr:TherJR_1396 dihydrodipicolinate reductase~PFAM: Dihydrodipicolinate reductase~PRIAM: Dihydrodipicolinate reductase~SPTR: Dihydrodipicolinate reductase%3B~TIGRFAM: Dihydrodipicolinate reductase%2C bacterial/plant~IMG reference gene:2504784897~PFAM: Dihydrodipicolinate reductase%2C N-terminus%3B Dihydrodipicolinate reductase%2C C-terminus~TIGRFAM: dihydrodipicolinate reductase gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1486 Thena_1487 Thena_1487 Thena_1487 1534696 1535571 - biotin/lipoyl attachment domain-containing protein InterPro IPR000089~KEGG: tte:TTE0188 dihydrolipoamide acyltransferase~PFAM: Biotin/lipoyl attachment~SPTR: Dihydrolipoamide acyltransferases%3B~IMG reference gene:2504784898~PFAM: Biotin-requiring enzyme gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1487 Thena_1488 Thena_1488 Thena_1488 1535596 1535940 - hypothetical protein IMG reference gene:2504784899~PFAM: DsrE/DsrF-like family gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1488 Thena_1489 Thena_1489 Thena_1489 1536015 1537052 - deoxyguanosinetriphosphate triphosphohydrolase COGs: COG0232 dGTP triphosphohydrolase~InterPro IPR006261:IPR003607:IPR006674~KEGG: toc:Toce_0930 deoxyguanosinetriphosphate triphosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein 2%3B~TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase~IMG reference gene:2504784900~PFAM: HD domain~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase%2C putative gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1489 Thena_1490 Thena_1490 Thena_1490 1537078 1539729 - pyruvate%2C phosphate dikinase COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase~InterPro IPR010121:IPR002192:IPR008279:IPR000121~KEGG: chy:CHY_0443 pyruvate phosphate dikinase~PFAM: Pyruvate phosphate dikinase%2C PEP/pyruvate-binding%3B PEP-utilising enzyme%2C mobile region%3B PEP-utilising enzyme~PRIAM: Pyruvate%2C phosphate dikinase~SPTR: Pyruvate%2C phosphate dikinase%3B~TIGRFAM: Pyruvate%2C phosphate dikinase~IMG reference gene:2504784901~PFAM: PEP-utilising enzyme%2C mobile domain%3B PEP-utilising enzyme%2C TIM barrel domain%3B Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain~TIGRFAM: pyruvate%2C phosphate dikinase gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1490 Thena_1491 Thena_1491 Thena_1491 1539818 1540630 - phosphotransferase ydiA COGs: COG1806 conserved hypothetical protein~HAMAP: Protein of unknown function DUF299%2C phosphotransferase%2C predicted~InterPro IPR005177~KEGG: swo:Swol_1513 hypothetical protein~PFAM: Protein of unknown function DUF299%2C phosphotransferase%2C predicted~SPTR: Putative phosphotransferase Swol_1513%3B~IMG reference gene:2504784902~PFAM: Domain of unknown function (DUF299) gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1491 Thena_1492 Thena_1492 Thena_1492 1540656 1542731 - glycyl-tRNA synthetase%2C beta subunit COGs: COG0751 Glycyl-tRNA synthetase beta subunit~InterPro IPR015944:IPR002311:IPR008909~KEGG: aar:Acear_0683 glycyl-tRNA synthetase beta chain~PFAM: Glycyl-tRNA synthetase%2C class IIc%2C beta subunit%2C N-terminal%3B DALR anticodon binding~PRIAM: Glycine--tRNA ligase~SPTR: Glycyl-tRNA synthetase beta subunit%3B~TIGRFAM: Glycyl-tRNA synthetase%2C class IIc%2C beta subunit~IMG reference gene:2504784903~PFAM: Glycyl-tRNA synthetase beta subunit%3B DALR anticodon binding domain~TIGRFAM: glycyl-tRNA synthetase%2C tetrameric type%2C beta subunit gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1492 Thena_1493 Thena_1493 Thena_1493 1542779 1543660 - Glycyl-tRNA synthetase alpha subunit COGs: COG0752 Glycyl-tRNA synthetase alpha subunit~HAMAP: Glycyl-tRNA synthetase%2C class IIc%2C alpha subunit~InterPro IPR002310~KEGG: cni:Calni_0744 glycyl-tRNA synthetase alpha chain~PFAM: Glycyl-tRNA synthetase%2C class IIc%2C alpha subunit~PRIAM: Glycine--tRNA ligase~SPTR: Glycyl-tRNA synthetase alpha chain%3B~TIGRFAM: Glycyl-tRNA synthetase%2C class IIc%2C alpha subunit~manually curated~IMG reference gene:2504784904~PFAM: Glycyl-tRNA synthetase alpha subunit~TIGRFAM: glycyl-tRNA synthetase%2C tetrameric type%2C alpha subunit gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1493 Thena_1494 Thena_1494 Thena_1494 1543662 1545116 - glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: pmh:P9215_19321 glycosyl transferase family protein~PFAM: Glycosyl transferase%2C family 2~SPTR: Glycosyl transferase%2C family 2%3B~IMG reference gene:2504784905~PFAM: Glycosyl transferase family 2 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1494 Thena_1495 Thena_1495 Thena_1495 1545152 1546273 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: npu:Npun_F4348 glycosyl transferase%2C group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase%2C group 1%3B~IMG reference gene:2504784906~PFAM: Glycosyl transferases group 1 gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1495 Thena_1496 Thena_1496 Thena_1496 1546266 1547462 - major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: tro:trd_1859 transporter%2C major facilitator family~PFAM: Major facilitator superfamily MFS-1~SPTR: Transporter%2C major facilitator family%3B~IMG reference gene:2504784907~PFAM: Major Facilitator Superfamily gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1496 Thena_1497 Thena_1497 Thena_1497 1547455 1547991 - hypothetical protein IMG reference gene:2504784908~PFAM: Recombination protein O N terminal gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1497 Thena_1498 Thena_1498 Thena_1498 1547988 1548428 - CMP/dCMP deaminase zinc-binding protein COGs: COG0295 Cytidine deaminase~InterPro IPR002125~KEGG: ere:EUBREC_0294 cytidine deaminase~PFAM: CMP/dCMP deaminase%2C zinc-binding~SPTR: Cytidine deaminase%3B~IMG reference gene:2504784909~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: cytidine deaminase%2C homotetrameric gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1498 Thena_1499 Thena_1499 Thena_1499 1548525 1550153 - CTP synthase COGs: COG0504 CTP synthase (UTP-ammonia lyase)~HAMAP: CTP synthase~InterPro IPR004468:IPR017456:IPR000991~KEGG: cow:Calow_0035 ctp synthase~PFAM: CTP synthase%2C N-terminal%3B Glutamine amidotransferase class-I%2C C-terminal~PRIAM: CTP synthase~SPTR: CTP synthase%3B~TIGRFAM: CTP synthase~IMG reference gene:2504784910~PFAM: Glutamine amidotransferase class-I%3B CTP synthase N-terminus~TIGRFAM: CTP synthase gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1499 Thena_1500 Thena_1500 Thena_1500 1550137 1551441 - protein of unknown function DUF21 COGs: COG1253 Hemolysins and related protein containing CBS domains~InterPro IPR000644:IPR002550:IPR005170~KEGG: aar:Acear_0620 protein of unknown function DUF21~PFAM: Protein of unknown function DUF21%3B Cystathionine beta-synthase%2C core%3B Transporter-associated region~SMART: Cystathionine beta-synthase%2C core~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784911~PFAM: CBS domain%3B Domain of unknown function DUF21%3B Transporter associated domain gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1500 Thena_1501 Thena_1501 Thena_1501 1551438 1551842 - diacylglycerol kinase COGs: COG0818 Diacylglycerol kinase~InterPro IPR000829~KEGG: cow:Calow_1066 diacylglycerol kinase~PFAM: Diacylglycerol kinase%2C prokaryotic~SPTR: Diacylglycerol kinase%3B~IMG reference gene:2504784912~PFAM: Prokaryotic diacylglycerol kinase gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1501 Thena_1502 Thena_1502 Thena_1502 1551817 1552266 - metalloprotease ybeY COGs: COG0319 metal-dependent hydrolase~HAMAP: Uncharacterised protein family UPF0054~InterPro IPR002036~KEGG: aae:aq_1354 hypothetical protein~PFAM: Uncharacterised protein family UPF0054~SPTR: Probable rRNA maturation factor%3B~TIGRFAM: Uncharacterised protein family UPF0054~IMG reference gene:2504784913~PFAM: Uncharacterized protein family UPF0054~TIGRFAM: metalloprotein%2C YbeY/UPF0054 family gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1502 Thena_1503 Thena_1503 Thena_1503 1552356 1554398 - 7TM receptor with intracellular metal dependent phosphohydrolase COGs: COG1480 membrane-associated HD superfamily hydrolase~InterProIPR006675:IPR003607:IPR011624:IPR011621:IPR 006674~KEGG: toc:Toce_0920 7TM receptor with intracellular metal dependent phosphohydrolase~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain%3B Metal-dependent phosphohydrolase%2C 7TM extracellular region%3B Metal-dependent phosphohydrolase%2C 7TM intracellular region~SMART: Metal-dependent phosphohydrolase%2C HD region~SPTR: 7TM receptor with intracellular metal dependent phosphohydrolase%3B~TIGRFAM: HDIG~IMG reference gene:2504784914~PFAM: 7TM-HD extracellular%3B HD domain%3B 7TM receptor with intracellular HD hydrolase~TIGRFAM: uncharacterized domain HDIG gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1503 Thena_1504 Thena_1504 Thena_1504 1554410 1554589 - 30S ribosomal protein S21 HAMAP: Ribosomal protein S21~InterPro IPR001911~KEGG: afn:Acfer_0713 ribosomal protein S21~PFAM: Ribosomal protein S21~SPTR: 30S ribosomal protein S21%3B~TIGRFAM: Ribosomal protein S21~IMG reference gene:2504784915~PFAM: Ribosomal protein S21~TIGRFAM: ribosomal protein S21 gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1504 Thena_1505 Thena_1505 Thena_1505 1554614 1554949 - histidine triad (HIT) protein COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase~InterPro IPR001310~KEGG: tal:Thal_0595 histidine triad (HIT) protein~PFAM: Histidine triad (HIT) protein~SPTR: Histidine triad (HIT) protein%3B~manually curated~IMG reference gene:2504784916~PFAM: HIT domain gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1505 Thena_1506 Thena_1506 Thena_1506 1555254 1556249 + glycosyl transferase family 9 COGs: COG0859 ADP-heptose:LPS heptosyltransferase~InterPro IPR002201~KEGG: hor:Hore_18880 lipopolysaccharide heptosyltransferase III%2C putative~PFAM: Glycosyl transferase%2C family 9~SPTR: Lipopolysaccharide heptosyltransferase III%2C putative%3B~IMG reference gene:2504784918~PFAM: Glycosyltransferase family 9 (heptosyltransferase) gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1506 Thena_1507 Thena_1507 Thena_1507 1556239 1557387 - O-antigen polymerase InterPro IPR007016~KEGG: ccb:Clocel_2117 O-antigen polymerase~PFAM: O-antigen ligase-related~SPTR: O-antigen polymerase%3B~IMG reference gene:2504784919~PFAM: O-Antigen ligase gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1507 Thena_1508 Thena_1508 Thena_1508 1557529 1559295 + diguanylate cyclase/phosphodiesterase with CBS domains COGs: COG2200 FOG: EAL domain~InterPro IPR000160:IPR001633:IPR000644~KEGG: ckr:CKR_1966 hypothetical protein~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Cystathionine beta-synthase%2C core%3B Diguanylate cyclase%2C predicted~SMART: Diguanylate phosphodiesterase%2C predicted%3B Diguanylate cyclase%2C predicted~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Diguanylate cyclase%2C predicted~manually curated~IMG reference gene:2504784920~PFAM: EAL domain%3B CBS domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1508 Thena_1509 Thena_1509 Thena_1509 1559608 1560432 + methyl-viologen-reducing hydrogenase delta subunit COGs: COG1908 Coenzyme F420-reducing hydrogenase delta subunit~InterPro IPR003813:IPR019575~KEGG: tye:THEYE_A1728 F420-non-reducing hydrogenase vhc iron-sulfur subunit D~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~SPTR: F420-non-reducing hydrogenase vhc iron-sulfur subunit D%3B~IMG reference gene:2504784921~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B Methyl-viologen-reducing hydrogenase%2C delta subunit gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1509 Thena_1510 Thena_1510 Thena_1510 1560452 1562224 + hydrogenase%2C Fe-only COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterProIPR013352:IPR001041:IPR019574:IPR001450:IPR 004108:IPR003149~KEGG: tye:THEYE_A1727 hydrogenase-1~PFAM: Iron hydrogenase%2C large subunit%2C C-terminal%3B NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B Ferredoxin%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup%3B Iron hydrogenase%2C small subunit-like~SPTR: Hydrogenase-1%3B~TIGRFAM: Iron hydrogenase%2C subset~IMG reference gene:2504784922~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B 2Fe-2S iron-sulfur cluster binding domain%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region%3B 4Fe-4S binding domain%3B Iron hydrogenase small subunit~TIGRFAM: hydrogenase%2C Fe-only gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1510 Thena_1511 Thena_1511 Thena_1511 1562447 1563823 + Aspartate ammonia-lyase COGs: COG1027 Aspartate ammonia-lyase~InterPro IPR000362~KEGG: mta:Moth_1273 aspartate ammonia-lyase~PFAM: Fumarate lyase~PRIAM: Aspartate ammonia-lyase~SPTR: Fumarate lyase%3B~IMG reference gene:2504784923~PFAM: Lyase gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1511 Thena_1512 Thena_1512 Thena_1512 1563820 1565076 + small GTP-binding protein COGs: COG1160 GTPase~InterPro IPR005225:IPR002917~KEGG: sat:SYN_01372 GTPase~PFAM: GTP-binding protein%2C HSR1-related~SPTR: GTPase%3B~TIGRFAM: Small GTP-binding protein~IMG reference gene:2504784924~PFAM: GTPase of unknown function~TIGRFAM: hydrogenase maturation GTPase HydF%3B small GTP-binding protein domain gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1512 Thena_1513 Thena_1513 Thena_1513 1565067 1566071 + Radical SAM domain protein COGs: COG0502 Biotin synthase~InterPro IPR006638:IPR007197~KEGG: drm:Dred_2151 biotin synthase~PFAM: Radical SAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~IMG reference gene:2504784925~PFAM: Radical SAM superfamily~TIGRFAM: iron-only hydrogenase maturation rSAM protein HydE gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1513 Thena_1514 Thena_1514 Thena_1514 1566074 1566829 + Nitrogenase COGs: COG1348 Nitrogenase subunit NifH (ATPase)~InterPro IPR000392~KEGG: clj:CLJU_c23120 nitrogenase iron protein~PFAM: Nitrogenase iron protein%2C subunit NifH/Protochlorophyllide reductase%2C subunit ChlL~PRIAM: Nitrogenase~SPTR: Nitrogenase iron protein%3B~IMG reference gene:2504784926~PFAM: 4Fe-4S iron sulfur cluster binding proteins%2C NifH/frxC family~TIGRFAM: nitrogenase iron protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1514 Thena_1515 Thena_1515 Thena_1515 1566823 1568115 + oxidoreductase/nitrogenase component 1 COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~InterPro IPR000510~KEGG: swo:Swol_0407 nitrogenase molybdenum-iron protein alpha and beta chains-like protein~PFAM: Nitrogenase/oxidoreductase%2C component 1~SPTR: Oxidoreductase/nitrogenase component 1%3B~IMG reference gene:2504784927~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1515 Thena_1516 Thena_1516 Thena_1516 1568124 1569287 + hypothetical protein COGs: COG2710 Nitrogenase molybdenum-iron protein alpha and beta chains~KEGG: swo:Swol_0406 hypothetical protein~SPTR: Oxidoreductase/nitrogenase component 1%3B~IMG reference gene:2504784928~PFAM: Nitrogenase component 1 type Oxidoreductase gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1516 Thena_1517 Thena_1517 Thena_1517 1569773 1570447 - formate dehydrogenase gamma subunit COGs: COG2864 Cytochrome b subunit of formate dehydrogenase~KEGG: fbl:Fbal_2053 formate dehydrogenase gamma subunit~SPTR: Putative formate dehydrogenase%3B~IMG reference gene:2504784929~PFAM: Cytochrome b(N-terminal)/b6/petB~TIGRFAM: formate dehydrogenase%2C gamma subunit gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1517 Thena_1518 Thena_1518 Thena_1518 1570447 1570806 - iron hydrogenase small subunit InterPro IPR006311:IPR003149~KEGG: shl:Shal_1409 iron hydrogenase small subunit~PFAM: Iron hydrogenase%2C small subunit-like~SPTR: Putative periplasmic [Fe] hydrogenase%2C small subunit%3B~IMG reference gene:2504784930~PFAM: Iron hydrogenase small subunit gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1518 Thena_1519 Thena_1519 Thena_1519 1570835 1572184 - hydrogenase%2C Fe-only COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterPro IPR013352:IPR001450:IPR004108~KEGG: tye:THEYE_A1726 hydrogenase~PFAM: Iron hydrogenase%2C large subunit%2C C-terminal%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~PRIAM: Ferredoxin hydrogenase~SPTR: Hydrogenase%3B~TIGRFAM: Iron hydrogenase%2C subset~IMG reference gene:2504784931~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B 4Fe-4S binding domain~TIGRFAM: hydrogenase%2C Fe-only gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1519 Thena_1520 Thena_1520 Thena_1520 1572647 1573900 + Integrase catalytic region InterPro IPR001584~KEGG: kol:Kole_0335 integrase catalytic region~PFAM: Integrase%2C catalytic core~SPTR: Integrase catalytic region%3B~IMG reference gene:2504784932~PFAM: Integrase core domain gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1520 Thena_1521 Thena_1521 Thena_1521 1574355 1575056 + NLP/P60 protein COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein)~InterPro IPR002477:IPR000064~KEGG: afn:Acfer_0115 NLP/P60 protein~PFAM: NLP/P60%3B Peptidoglycan binding-like~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784934~PFAM: NlpC/P60 family%3B Putative peptidoglycan binding domain gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1521 Thena_1522 Thena_1522 Thena_1522 1575043 1575873 - 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase~HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~InterPro IPR004424:IPR006204~KEGG: dth:DICTH_1383 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinase~SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase%3B~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~manually curated~IMG reference gene:2504784935~PFAM: GHMP kinases N terminal domain~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1522 Thena_1523 Thena_1523 Thena_1523 1575980 1576645 + SNARE associated Golgi protein-like protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: cma:Cmaq_1693 SNARE associated Golgi protein~PFAM: SNARE associated Golgi protein~SPTR: SNARE associated Golgi protein%3B~IMG reference gene:2504784936~PFAM: SNARE associated Golgi protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1523 Thena_1524 Thena_1524 Thena_1524 1576623 1576988 + Conserved hypothetical protein CHP02058 InterPro IPR011719~KEGG: cyc:PCC7424_4385 hypothetical protein~PFAM: Conserved hypothetical protein CHP02058~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP02058~IMG reference gene:2504784937~PFAM: Conserved hypothetical protein (Lin0512_fam)~TIGRFAM: conserved hypothetical protein gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1524 Thena_1525 Thena_1525 Thena_1525 1576985 1578136 - Nicotinate phosphoribosyltransferase COGs: COG1488 Nicotinic acid phosphoribosyltransferase~InterPro IPR002638~KEGG: tba:TERMP_01329 nicotinate phosphoribosyltransferase~PFAM: Quinolinate phosphoribosyl transferase~PRIAM: Nicotinate phosphoribosyltransferase~SPTR: Quinolinate phosphoribosyl transferase%2C C-terminal domain protein%3B~IMG reference gene:2504784938~PFAM: Quinolinate phosphoribosyl transferase%2C C-terminal domain%3B Quinolinate phosphoribosyl transferase%2C N-terminal domain~TIGRFAM: putative nicotinate phosphoribosyltransferase gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1525 Thena_1526 Thena_1526 Thena_1526 1578142 1578792 - Thymidylate synthase thyX COGs: COG1351 alternative thymidylate synthase~HAMAP: Thymidylate synthase thyX~InterPro IPR003669~KEGG: ttr:Tter_0028 thymidylate synthase%2C flavin-dependent~PFAM: Thymidylate synthase ThyX~SPTR: Thymidylate synthase thyX%3B~TIGRFAM: Thymidylate synthase ThyX~IMG reference gene:2504784939~PFAM: Thymidylate synthase complementing protein~TIGRFAM: thymidylate synthase%2C flavin-dependent gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1526 Thena_1527 Thena_1527 Thena_1527 1578851 1579075 - 50S ribosomal protein L31 COGs: COG0254 Ribosomal protein L31~HAMAP: 50S ribosomal protein L31~InterPro IPR002150~KEGG: ckr:CKR_3277 hypothetical protein~PFAM: Ribosomal protein L31~SPTR: 50S ribosomal protein L31%3B~TIGRFAM: Ribosomal protein L31~IMG reference gene:2504784940~PFAM: Ribosomal protein L31~TIGRFAM: ribosomal protein L31 gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1527 Thena_1528 Thena_1528 Thena_1528 1579170 1579532 + DsrE family protein COGs: COG2044 peroxiredoxins~InterPro IPR003787~KEGG: cch:Cag_1216 hypothetical protein~PFAM: Sulphur relay%2C DsrE-like protein~SPTR: DsrE/DsrF-like family protein%3B~IMG reference gene:2504784941~PFAM: DsrE/DsrF-like family gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1528 Thena_1529 Thena_1529 Thena_1529 1579649 1580659 - cytochrome d ubiquinol oxidase%2C subunit II COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2~InterPro IPR003317~KEGG: tye:THEYE_A1308 cytochrome d ubiquinol oxidase%2C subunit II~PFAM: Cytochrome bd ubiquinol oxidase%2C subunit II~SPTR: Cytochrome D ubiquinol oxidase%2C subunit II%3B~TIGRFAM: Cytochrome bd ubiquinol oxidase%2C subunit II~IMG reference gene:2504784942~PFAM: Cytochrome oxidase subunit II~TIGRFAM: cytochrome d oxidase%2C subunit II (cydB) gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1529 Thena_1530 Thena_1530 Thena_1530 1580671 1581987 - cytochrome bd ubiquinol oxidase subunit I COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1~InterPro IPR002585~KEGG: ddf:DEFDS_1619 cytochrome bd oxidase subunit I~PFAM: Cytochrome bd ubiquinol oxidase%2C subunit I~SPTR: Cytochrome bd oxidase subunit I%3B~IMG reference gene:2504784943~PFAM: Bacterial Cytochrome Ubiquinol Oxidase gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1530 Thena_1531 Thena_1531 Thena_1531 1582082 1583266 + Methyltransferase type 11 InterPro IPR013216~KEGG: dol:Dole_1540 methyltransferase type 11~PFAM: Methyltransferase type 11~SPTR: Methyltransferase type 11%3B~IMG reference gene:2504784944~PFAM: Methyltransferase domain gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1531 Thena_1532 Thena_1532 Thena_1532 1583267 1583590 - protein of unknown function DUF134 COGs: COG1342 DNA-binding protein~InterPro IPR002852~KEGG: protein of unknown function DUF134~PFAM: Uncharacterised protein family UPF0251~SPTR: UPF0251 protein EthhaDRAFT_0842%3B~IMG reference gene:2504784945~PFAM: Protein of unknown function DUF134 gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1532 Thena_1533 Thena_1533 Thena_1533 1583748 1584215 + hypothetical protein KEGG: mar:MAE_49240 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784946 gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1533 Thena_1534 Thena_1534 Thena_1534 1584330 1584989 + Nitrite reductase (NAD(P)H) COGs: COG1251 NAD(P)H-nitrite reductase~InterPro IPR005117:IPR006067~KEGG: dae:Dtox_1606 nitrite and sulphite reductase 4Fe-4S region~PFAM: Nitrite/sulphite reductase 4Fe-4S region%3B Nitrite/sulphite reductase%2C hemoprotein beta-component%2C ferrodoxin-like~PRIAM: Nitrite reductase (NAD(P)H)~SPTR: Nitrite and sulphite reductase 4Fe-4S region%3B~IMG reference gene:2504784947~PFAM: Nitrite and sulphite reductase 4Fe-4S domain%3B Nitrite/Sulfite reductase ferredoxin-like half domain gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1534 Thena_1535 Thena_1535 Thena_1535 1585082 1586296 + diguanylate phosphodiesterase metal dependent hydrolase domain protein COGs: COG3434 signal transduction protein containing EAL and modified HD-GYP domains~InterPro IPR001633:IPR013976~KEGG: cbe:Cbei_2184 diguanylate phosphodiesterase~PFAM: Metal-dependent hydrolase HDOD%3B Diguanylate phosphodiesterase%2C predicted~SPTR: Diguanylate phosphodiesterase%3B~IMG reference gene:2504784948~PFAM: EAL domain%3B HDOD domain gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1535 Thena_1536 Thena_1536 Thena_1536 1586293 1586781 - protein of unknown function DUF355 COGs: COG1839 conserved hypothetical protein~InterPro IPR007153~KEGG: cyc:PCC7424_2030 protein of unknown function DUF355~PFAM: Adenosine specific kinase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784949~PFAM: Adenosine specific kinase gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1536 Thena_1537 Thena_1537 Thena_1537 1586861 1588456 + DEAD/DEAH box helicase domain protein COGs: COG0513 Superfamily II DNA and RNA helicase~InterPro IPR014001:IPR001650:IPR011545:IPR005580~KEGG: dhd:Dhaf_3118 DEAD/DEAH box helicase domain protein~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal%3B DbpA%2C RNA-binding~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: DEAD/DEAH box helicase domain protein%3B~IMG reference gene:2504784950~PFAM: Helicase conserved C-terminal domain%3B DbpA RNA binding domain%3B DEAD/DEAH box helicase gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1537 Thena_1538 Thena_1538 Thena_1538 1588479 1588952 + hypothetical protein IMG reference gene:2504784951 gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1538 Thena_1539 Thena_1539 Thena_1539 1588942 1589421 - hypothetical protein IMG reference gene:2504784952 gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1539 Thena_1540 Thena_1540 Thena_1540 1589467 1590717 + protein of unknown function DUF1212 COGs: COG2966 conserved hypothetical protein~InterPro IPR010619~KEGG: mxa:MXAN_1583 hypothetical protein~PFAM: Protein of unknown function DUF1212~SPTR: Putative membrane protein%3B~IMG reference gene:2504784953~PFAM: Protein of unknown function (DUF1212) gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1540 Thena_1541 Thena_1541 Thena_1541 1590714 1592300 - beta-lactamase InterPro IPR001466~KEGG: sar:SAR2531 hypothetical protein~PFAM: Beta-lactamase-related~SPTR: Flp protein%3B~IMG reference gene:2504784954~PFAM: Beta-lactamase gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1541 Thena_1542 Thena_1542 Thena_1542 1592412 1593617 + GTP cyclohydrolase-2 COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase~HAMAP: GTP cyclohydrolase-2~InterPro IPR000422:IPR000926~KEGG: sul:SYO3AOP1_1761 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~PFAM: DHBP synthase RibB%3B GTP cyclohydrolase II~SPTR: Riboflavin biosynthesis protein ribBA%3B~TIGRFAM: DHBP synthase RibB%3B GTP cyclohydrolase II~IMG reference gene:2504784955~PFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1542 Thena_1543 Thena_1543 Thena_1543 1593656 1594126 + 6%2C7-dimethyl-8-ribityllumazine synthase COGs: COG0054 Riboflavin synthase beta-chain~HAMAP: 6%2C7-dimethyl-8-ribityllumazine synthase~InterPro IPR002180~KEGG: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~SPTR: 6%2C7-dimethyl-8-ribityllumazine synthase%3B~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~IMG reference gene:2504784956~PFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1543 Thena_1544 Thena_1544 Thena_1544 1594147 1596150 + DEAD/DEAH box helicase domain protein COGs: COG1200 RecG-like helicase~InterPro IPR014001:IPR001650:IPR011545~KEGG: dtu:Dtur_1140 ATP-dependent DNA helicase RecG~PFAM: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SMART: DEAD-like helicase%2C N-terminal%3B DNA/RNA helicase%2C C-terminal~SPTR: ATP-dependent DNA helicase RecG%3B~IMG reference gene:2504784957~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase~TIGRFAM: ATP-dependent DNA helicase RecG gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1544 Thena_1545 Thena_1545 Thena_1545 1596147 1596710 + Protein of unknown function methylase putative COGs: COG0742 N6-adenine-specific methylase~InterPro IPR016065~KEGG: adg:Adeg_0116 methyltransferase~PFAM: Protein of unknown function methylase putative~SPTR: Methyltransferase%3B~IMG reference gene:2504784958~PFAM: Conserved hypothetical protein 95~TIGRFAM: RNA methyltransferase%2C RsmD family gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1545 Thena_1546 Thena_1546 Thena_1546 1596703 1597209 + Phosphopantetheine adenylyltransferase COGs: COG0669 Phosphopantetheine adenylyltransferase~HAMAP: Coenzyme A biosynthesis protein~InterPro IPR001980:IPR004821:IPR004820~KEGG: min:Minf_0425 phosphopantetheine adenylyltransferase~PFAM: Cytidylyltransferase~PRIAM: Pantetheine-phosphate adenylyltransferase~SPTR: Phosphopantetheine adenylyltransferase%3B~TIGRFAM: Coenzyme A biosynthesis protein%3B Cytidyltransferase-related~IMG reference gene:2504784959~PFAM: Cytidylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%2C bacterial%3B cytidyltransferase-related domain gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1546 Thena_1547 Thena_1547 Thena_1547 1597206 1597658 + hypothetical protein KEGG: hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784960 gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1547 Thena_1548 Thena_1548 Thena_1548 1597672 1598109 - hypothetical protein IMG reference gene:2504784961 gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1548 Thena_1549 Thena_1549 Thena_1549 1598164 1599543 - transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792~KEGG: aco:Amico_0308 transcriptional regulator%2C LuxR family~PFAM: Transcription regulator LuxR%2C C-terminal~SMART: Transcription regulator LuxR%2C C-terminal~SPTR: Transcriptional regulator%2C LuxR family%3B~IMG reference gene:2504784962~PFAM: Bacterial regulatory proteins%2C luxR family gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1549 Thena_1550 Thena_1550 Thena_1550 1599647 1599847 + hypothetical protein IMG reference gene:2504784963 gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1550 Thena_1551 Thena_1551 Thena_1551 1599877 1600866 + secretion protein HlyD family protein COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: geo:Geob_1779 secretion protein HlyD family protein~PFAM: Secretion protein HlyD~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784964~PFAM: HlyD family secretion protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1551 Thena_1552 Thena_1552 Thena_1552 1600863 1601759 + Fe(3+)-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: slp:Slip_0728 ABC transporter related protein~PFAM: ABC transporter-like~PRIAM: Fe(3+)-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~IMG reference gene:2504784965~PFAM: ABC transporter gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1552 Thena_1553 Thena_1553 Thena_1553 1601744 1602481 + Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: csc:Csac_2189 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~IMG reference gene:2504784966~PFAM: ABC transporter gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1553 Thena_1554 Thena_1554 Thena_1554 1602690 1603751 + Selenide%2C water dikinase COGs: COG0709 Selenophosphate synthase~Contains Selenocysteine~HAMAP: Selenide%2C water dikinase~InterPro IPR004536:IPR000728:IPR010918~KEGG: adg:Adeg_0304 selenide%2C water dikinase~PFAM: AIR synthase related protein%3B AIR synthase related protein%2C C-terminal~SPTR: Selenide%2C water dikinase%3B~TIGRFAM: Selenide water dikinase~manually curated~IMG reference gene:2504784967~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: selenium donor protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1554 Thena_1555 Thena_1555 Thena_1555 1603751 1604887 + ABC-2 type transporter COGs: COG0842 ABC-type multidrug transport system permease component~InterPro IPR013525~KEGG: swo:Swol_2449 ABC-type multidrug transport system permease component~PFAM: ABC-2 type transporter~SPTR: ABC-type multidrug transport system permease component%3B~IMG reference gene:2504784968~PFAM: ABC-2 type transporter gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1555 Thena_1556 Thena_1556 Thena_1556 1604888 1605298 - UspA domain-containing protein InterPro IPR006016~KEGG: mma:MM_3077 putative transcriptional regulator~PFAM: UspA~SPTR: Putative transcriptional regulator%3B~IMG reference gene:2504784969~PFAM: Universal stress protein family gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1556 Thena_1557 Thena_1557 Thena_1557 1605322 1606290 - protein of unknown function DUF81 InterPro IPR002781~KEGG: cpb:Cphamn1_1842 protein of unknown function DUF81~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784970~PFAM: Sulfite exporter TauE/SafE gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1557 Thena_1558 Thena_1558 Thena_1558 1606301 1606732 - hypothetical protein KEGG: tye:THEYE_A0737 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784971 gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1558 Thena_1559 Thena_1559 Thena_1559 1607111 1608412 + protein of unknown function DUF81 COGs: COG0730 permease~InterPro IPR002781~KEGG: drm:Dred_1427 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784972~PFAM: Sulfite exporter TauE/SafE gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1559 Thena_1560 Thena_1560 Thena_1560 1608445 1609230 + hypothetical protein KEGG: sfu:Sfum_0645 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784973 gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1560 Thena_1561 Thena_1561 Thena_1561 1609303 1609722 + hypothetical protein KEGG: iho:Igni_0456 UspA domain-containing protein~SPTR: UspA domain protein%3B~IMG reference gene:2504784974~PFAM: Universal stress protein family gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1561 Thena_1562 Thena_1562 Thena_1562 1609692 1610732 + phosphonate ABC transporter%2C periplasmic phosphonate-binding protein COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component~InterPro IPR005770~KEGG: dhd:Dhaf_1192 phosphonate ABC transporter%2C periplasmic phosphonate-binding protein~SPTR: Phosphonate ABC transporter%2C periplasmic phosphonate-binding protein%3B~TIGRFAM: Phosphonate-binding periplasmic protein~IMG reference gene:2504784975~PFAM: Bacterial extracellular solute-binding proteins%2C family 3~TIGRFAM: phosphate/phosphite/phosphonate ABC transporters%2C periplasmic binding protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1562 Thena_1563 Thena_1563 Thena_1563 1610729 1612126 + putative signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR003660:IPR011712:IPR003594~KEGG: nth:Nther_0649 integral membrane sensor signal transduction histidine kinase~PFAM: Signal transduction histidine kinase%2C subgroup 3%2C dimerisation and phosphoacceptor region%3B HAMP linker domain%3B ATP-binding region%2C ATPase-like~SPTR: Integral membrane sensor signal transduction histidine kinase%3B~IMG reference gene:2504784976~PFAM: Histidine kinase%3B HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1563 Thena_1564 Thena_1564 Thena_1564 1612080 1612778 + two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789:IPR000792~KEGG: dhd:Dhaf_1230 two component transcriptional regulator%2C LuxR family~PFAM: Signal transduction response regulator%2C receiver region%3B Transcription regulator LuxR%2C C-terminal~SMART: Signal transduction response regulator%2C receiver region%3B Transcription regulator LuxR%2C C-terminal~SPTR: Two component transcriptional regulator%2C LuxR family%3B~IMG reference gene:2504784977~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1564 Thena_1565 Thena_1565 Thena_1565 1612779 1614017 + Citrate transporter COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease~InterPro IPR004680~KEGG: sat:SYN_01580 arsenical pump membrane protein~PFAM: Divalent ion symporter~SPTR: Arsenical pump membrane protein%3B~IMG reference gene:2504784978~PFAM: Citrate transporter gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1565 Thena_1566 Thena_1566 Thena_1566 1614018 1614464 - nucleoside recognition domain protein KEGG: adg:Adeg_0110 nucleoside recognition domain protein~SPTR: Nucleoside recognition domain protein%3B~IMG reference gene:2504784979 gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1566 Thena_1567 Thena_1567 Thena_1567 1614461 1614898 - nucleoside recognition domain protein InterPro IPR011642~KEGG: adg:Adeg_0111 nucleoside recognition domain protein~PFAM: Nucleoside recognition~SPTR: Nucleoside recognition domain protein%3B~IMG reference gene:2504784980~PFAM: Nucleoside recognition gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1567 Thena_1568 Thena_1568 Thena_1568 1614993 1615643 + exsB protein COGs: COG0603 PP-loop superfamily ATPase~InterPro IPR004479:IPR018317~KEGG: psm:PSM_A1912 regulator protein~PFAM: Queuosine synthesis-like~SPTR: 7-cyano-7-deazaguanine synthase%3B~TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis~IMG reference gene:2504784981~PFAM: ExsB~TIGRFAM: queuosine biosynthesis protein QueC gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1568 Thena_1569 Thena_1569 Thena_1569 1616019 1617281 + 2-hydroxyglutaryl-CoA dehydratase D-component COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB~InterPro IPR010327~KEGG: tai:Taci_0254 2-hydroxyglutaryl-CoA dehydratase D-component~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component~SPTR: 2-hydroxyglutaryl-CoA dehydratase D-component%3B~IMG reference gene:2504784982~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1569 Thena_1570 Thena_1570 Thena_1570 1617278 1618027 + CoA-substrate-specific enzyme activase COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)~InterPro IPR008275:IPR002731~KEGG: tai:Taci_0253 CoA-substrate-specific enzyme activase~PFAM: ATPase%2C BadF/BadG/BcrA/BcrD type~PRIAM: Benzoyl-CoA reductase~SPTR: CoA-substrate-specific enzyme activase%3B~TIGRFAM: CoA enzyme activase~IMG reference gene:2504784983~PFAM: BadF/BadG/BcrA/BcrD ATPase family~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1570 Thena_1571 Thena_1571 Thena_1571 1618102 1618398 + peptidase S24 and S26 domain protein KEGG: pph:Ppha_1368 peptidase S24 and S26 domain protein~SPTR: SOS-response transcriptional repressors (RecA-mediated autopeptidase)-like%3B~IMG reference gene:2504784984 gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1571 Thena_1572 Thena_1572 Thena_1572 1618379 1619635 + DNA-directed DNA polymerase COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair~InterPro IPR001126~KEGG: pub:SAR11_0634 hypothetical protein~PFAM: DNA-repair protein%2C UmuC-like~PRIAM: DNA-directed DNA polymerase~SPTR: Predicted nucleotidyltransferase%3B~IMG reference gene:2504784985~PFAM: impB/mucB/samB family C-terminal%3B impB/mucB/samB family gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1572 Thena_1573 Thena_1573 Thena_1573 1619732 1621333 + L-lactate permease%2C putative COGs: COG1620 L-lactate permease~KEGG: tye:THEYE_A1556 L-lactate permease%2C putative~SPTR: L-lactate permease%2C putative%3B~IMG reference gene:2504784986~PFAM: L-lactate permease gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1573 Thena_1574 Thena_1574 Thena_1574 1621379 1623073 - L-lactate transport COGs: COG1620 L-lactate permease~InterPro IPR003804~KEGG: bgf:BC1003_2066 L-lactate transport~PFAM: L-lactate permease~SPTR: L-lactate transport%3B~TIGRFAM: L-lactate permease~IMG reference gene:2504784987~PFAM: L-lactate permease~TIGRFAM: L-lactate transport gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1574 Thena_1575 Thena_1575 Thena_1575 1623477 1624922 + putative methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004010:IPR003660~KEGG: toc:Toce_0469 methyl-accepting chemotaxis sensory transducer with cache sensor~PFAM: Cache%3B HAMP linker domain~SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor%3B~IMG reference gene:2504784988~PFAM: HAMP domain%3B Cache domain gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1575 Thena_1576 Thena_1576 Thena_1576 1624912 1625679 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: tjr:TherJR_2630 methyl-accepting chemotaxis sensory transducer with cache sensor~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis sensory transducer with Cache sensor%3B~IMG reference gene:2504784989~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1576 Thena_1577 Thena_1577 Thena_1577 1625745 1626245 + hypothetical protein IMG reference gene:2504784990 gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1577 Thena_1578 Thena_1578 Thena_1578 1626246 1626831 + pseudogene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1578 Thena_1579 Thena_1579 Thena_1579 1627306 1628181 + Sulfate-transporting ATPase COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: mpd:MCP_2512 ABC transporter ATP binding protein~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter ATP binding protein%3B~IMG reference gene:2504784995~PFAM: ABC transporter gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1579 Thena_1580 Thena_1580 Thena_1580 1628178 1628924 + ABC-2 type transporter InterPro IPR013525~KEGG: mbu:Mbur_1716 ABC transporter%2C inner membrane subunit~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%2C transmembrane subunit%3B~IMG reference gene:2504784996~PFAM: ABC-2 type transporter~TIGRFAM: ABC-2 type transporter%2C NodJ family gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1580 Thena_1581 Thena_1581 Thena_1581 1628921 1629307 - protein of unknown function DUF202 InterPro IPR003807~KEGG: hya:HY04AAS1_0982 protein of unknown function DUF202~PFAM: Protein of unknown function DUF202~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784997~PFAM: Domain of unknown function DUF gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1581 Thena_1582 Thena_1582 Thena_1582 1629335 1629739 - protein of unknown function DUF202 InterPro IPR003807~KEGG: hth:HTH_1422 hypothetical protein~PFAM: Protein of unknown function DUF202~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504784998~PFAM: Domain of unknown function DUF gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1582 Thena_1583 Thena_1583 Thena_1583 1629895 1631352 + Pyruvate carboxylase COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit~InterPro IPR005481:IPR005479:IPR005482~KEGG: rca:Rcas_2955 carbamoyl-phosphate synthase L chain ATP-binding~PFAM: Carbamoyl phosphate synthetase%2C large subunit%2C ATP-binding%3B Carbamoyl phosphate synthase%2C large subunit%2C N-terminal%3B Biotin carboxylase%2C C-terminal~PRIAM: Pyruvate carboxylase~SPTR: Carbamoyl-phosphate synthase L chain ATP-binding%3B~IMG reference gene:2504784999~PFAM: Carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B Biotin carboxylase C-terminal domain%3B Carbamoyl-phosphate synthase L chain%2C N-terminal domain gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1583 Thena_1584 Thena_1584 Thena_1584 1631362 1633380 + Pyruvate carboxylase COGs: COG1038 Pyruvate carboxylase~InterPro IPR000891:IPR003379:IPR000089~KEGG: cts:Ctha_2637 oxaloacetate decarboxylase~PFAM: Biotin/lipoyl attachment%3B Pyruvate carboxyltransferase%3B Conserved carboxylase region~PRIAM: Pyruvate carboxylase~SPTR: Oxaloacetate decarboxylase%3B~IMG reference gene:2504785000~PFAM: HMGL-like%3B Conserved carboxylase domain%3B Biotin-requiring enzyme gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1584 Thena_1585 Thena_1585 Thena_1585 1633437 1635065 - Hydroxylamine reductase COGs: COG1151 6Fe-6S prismane cluster-containing protein~HAMAP: Hybrid cluster protein~InterPro IPR010048:IPR004137~KEGG: sfu:Sfum_3446 hydroxylamine reductase~PFAM: Prismane~SPTR: Hydroxylamine reductase%3B~TIGRFAM: Hybrid cluster protein~IMG reference gene:2504785001~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: hydroxylamine reductase gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1585 Thena_1586 Thena_1586 Thena_1586 1635198 1635863 + transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterPro IPR000595:IPR001808~KEGG: sat:SYN_00248 cyclic nucleotide-binding domain-containing protein~PFAM: Cyclic nucleotide-binding%3B HTH transcriptional regulator%2C Crp~SMART: Cyclic nucleotide-binding%3B HTH transcriptional regulator%2C Crp~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785002~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1586 Thena_1587 Thena_1587 Thena_1587 1635866 1637238 - pseudogene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1587 Thena_1588 Thena_1588 Thena_1588 1637290 1638300 - Vitamin K epoxide reductase InterPro IPR012932:IPR002109~KEGG: rrs:RoseRS_0493 vitamin K epoxide reductase~PFAM: Vitamin K epoxide reductase%3B Glutaredoxin~SMART: Vitamin K epoxide reductase~SPTR: Vitamin K epoxide reductase%3B~IMG reference gene:2504785004~PFAM: Vitamin K epoxide reductase family gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1588 Thena_1589 Thena_1589 Thena_1589 1638417 1640297 - carbon starvation protein CstA COGs: COG1966 Carbon starvation protein predicted membrane protein~InterPro IPR003706~KEGG: tye:THEYE_A1642 putative carbon starvation protein A~PFAM: Carbon starvation protein CstA~SPTR: Carbon starvation protein%2C CstA family%3B~IMG reference gene:2504785005~PFAM: Carbon starvation protein CstA gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1589 Thena_1590 Thena_1590 Thena_1590 1640521 1640730 - hypothetical protein IMG reference gene:2504785006 gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1590 Thena_1591 Thena_1591 Thena_1591 1640794 1641825 - protein of unknown function DUF81 InterPro IPR002781~KEGG: afu:AF2125 hypothetical protein~PFAM: Protein of unknown function DUF81~SPTR: Conserved hypothetical transmembrane protein%3B~IMG reference gene:2504785007~PFAM: Sulfite exporter TauE/SafE gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1591 Thena_1592 Thena_1592 Thena_1592 1641879 1642667 - protein of unknown function DUF169 COGs: COG2043 conserved hypothetical protein~InterPro IPR003748~KEGG: drt:Dret_2437 protein of unknown function DUF169~PFAM: Protein of unknown function DUF169~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785008~PFAM: Uncharacterised ArCR%2C COG2043 gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1592 Thena_1593 Thena_1593 Thena_1593 1642752 1643495 + transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterPro IPR000595:IPR001808~KEGG: adg:Adeg_1955 transcriptional regulator%2C Crp/Fnr family~PFAM: Cyclic nucleotide-binding%3B HTH transcriptional regulator%2C Crp~SMART: HTH transcriptional regulator%2C Crp%3B Cyclic nucleotide-binding~SPTR: Transcriptional regulator%2C Crp/Fnr family%3B~IMG reference gene:2504785009~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1593 Thena_1594 Thena_1594 Thena_1594 1643534 1644295 - protein of unknown function UPF0153 InterPro IPR005358~KEGG: tye:THEYE_A0135 lipoprotein%2C putative~PFAM: Uncharacterised protein family UPF0153~SPTR: Lipoprotein%2C putative%3B~IMG reference gene:2504785010~PFAM: Uncharacterised protein family (UPF0153) gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1594 Thena_1595 Thena_1595 Thena_1595 1644316 1645497 - hypothetical protein COGs: COG1150 Heterodisulfide reductase subunit C~KEGG: tye:THEYE_A1829 QmoC~SPTR: QmoC%3B~IMG reference gene:2504785011 gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1595 Thena_1596 Thena_1596 Thena_1596 1645510 1647657 - methyl-viologen-reducing hydrogenase delta subunit COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR003953:IPR001450:IPR003813~KEGG: tye:THEYE_A1830 heterodisulfide reductase%2C subunit A/methylviologen reducing hydrogenase%2C subunit delta~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit%3B Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Heterodisulfide reductase%2C subunit A/methylviologen reducing hydrogenase%2C subunit delta%3B~IMG reference gene:2504785012~PFAM: Methyl-viologen-reducing hydrogenase%2C delta subunit%3B FAD binding domain gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1596 Thena_1597 Thena_1597 Thena_1597 1647661 1648923 - FAD dependent oxidoreductase COGs: COG1148 Heterodisulfide reductase subunit A and related polyferredoxins~InterPro IPR006076:IPR001450~KEGG: dol:Dole_0999 heterodisulfide reductase%2C subunit A (HdrA)~PFAM: FAD dependent oxidoreductase%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Heterodisulfide reductase%2C subunit A (HdrA)%3B~IMG reference gene:2504785013~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1597 Thena_1598 Thena_1598 Thena_1598 1649013 1650968 - adenylylsulfate reductase%2C alpha subunit COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit~InterPro IPR011803:IPR003953~KEGG: tye:THEYE_A1832 adenylylsulfate reductase subunit alpha~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal~SPTR: Adenylylsulfate reductase%2C alpha subunit%3B~TIGRFAM: Adenylylsulphate reductase%2C alpha subunit~IMG reference gene:2504785014~PFAM: domain%3B FAD binding domain~TIGRFAM: adenosine phosphosulphate reductase%2C alpha subunit gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1598 Thena_1599 Thena_1599 Thena_1599 1650999 1651436 - adenylylsulfate reductase%2C beta subunit InterPro IPR011802:IPR001450~KEGG: cte:CT0864 adenylylsulfate reductase%2C beta subunit~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Adenylylsulfate reductase%2C beta subunit%3B~TIGRFAM: Adenylylsulphate reductase%2C beta subunit~IMG reference gene:2504785015~PFAM: Adenosine-5'-phosphosulfate reductase beta subunit%3B~TIGRFAM: adenosine phosphosulphate reductase%2C beta subunit gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1599 Thena_1600 Thena_1600 Thena_1600 1651541 1651858 - hypothetical protein KEGG: dau:Daud_1079 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785016 gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1600 Thena_1601 Thena_1601 Thena_1601 1651864 1653123 - sulfate adenylyltransferase COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase)~InterPro IPR002650~KEGG: dau:Daud_1078 sulfate adenylyltransferase~PFAM: Sulphate adenylyltransferase~PRIAM: Sulfate adenylyltransferase~SPTR: Sulfate adenylyltransferase%3B~TIGRFAM: Sulphate adenylyltransferase~IMG reference gene:2504785017~PFAM: ATP-sulfurylase~TIGRFAM: ATP sulphurylase gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1601 Thena_1602 Thena_1602 Thena_1602 1653163 1653813 - Adenylate kinase COGs: COG0563 Adenylate kinase and related kinase~HAMAP: Adenylate kinase~InterPro IPR006259:IPR000850:IPR007862~KEGG: tye:THEYE_A1836 adenylate kinase~PFAM: Adenylate kinase%3B Adenylate kinase%2C zinc-finger lid region~SPTR: Adenylate kinase%3B~TIGRFAM: Adenylate kinase%2C subfamily~IMG reference gene:2504785018~PFAM: Adenylate kinase%2C active site lid%3B Adenylate kinase~TIGRFAM: adenylate kinases gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1602 Thena_1603 Thena_1603 Thena_1603 1654187 1655449 - Phenylacetate--CoA ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: cki:Calkr_0996 phenylacetate--CoA ligase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Phenylacetate--CoA ligase~SPTR: Phenylacetate--CoA ligase%3B~IMG reference gene:2504785019~PFAM: AMP-binding enzyme gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1603 Thena_1604 Thena_1604 Thena_1604 1655546 1657327 + oligoendopeptidase F COGs: COG1164 Oligoendopeptidase F~InterPro IPR004438:IPR013647:IPR001567~KEGG: tte:TTE1010 oligoendopeptidase F~PFAM: Peptidase M3A/M3B%2C thimet/oligopeptidase F%3B Peptidase M3B%2C oligopeptidase F%2C N-terminal~SPTR: Oligoendopeptidase F%3B~TIGRFAM: Peptidase M3B%2C oligoendopeptidase F~IMG reference gene:2504785020~PFAM: Oligopeptidase F%3B Peptidase family M3~TIGRFAM: oligoendopeptidase F gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1604 Thena_1605 Thena_1605 Thena_1605 1657399 1657950 - hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain~InterPro IPR004647~KEGG: cbi:CLJ_B3749 hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta region~PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region~PRIAM: Fumarate hydratase~SPTR: Hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta region%3B~TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region~IMG reference gene:2504785021~PFAM: Fumarase C-terminus~TIGRFAM: hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta region gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1605 Thena_1606 Thena_1606 Thena_1606 1657952 1658362 - hemerythrin-like metal-binding protein COGs: COG2703 Hemerythrin~InterPro IPR012827:IPR012312~KEGG: toc:Toce_0471 hemerythrin-like metal-binding protein~PFAM: Haemerythrin/HHE cation-binding motif~SPTR: Hemerythrin-like metal-binding protein%3B~TIGRFAM: Haemerythrin-like%2C metal-binding~IMG reference gene:2504785022~PFAM: Hemerythrin HHE cation binding domain~TIGRFAM: hemerythrin-like metal-binding domain gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1606 Thena_1607 Thena_1607 Thena_1607 1658493 1658849 - Dinitrogenase iron-molybdenum cofactor biosynthesis protein COGs: COG1433 conserved hypothetical protein~InterPro IPR003731~KEGG: dat:HRM2_42460 hypothetical protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis%3B~IMG reference gene:2504785023~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1607 Thena_1608 Thena_1608 Thena_1608 1658857 1660050 - ATPase-like%2C ParA/MinD COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR019591:IPR003731~KEGG: drt:Dret_0440 ATPase-like%2C ParA/MinD~PFAM: ATPase-like%2C ParA/MinD%3B Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Dinitrogenase iron-molybdenum cofactor%3B~IMG reference gene:2504785024~PFAM: ParA/MinD ATPase like%3B Anion-transporting ATPase%3B Dinitrogenase iron-molybdenum cofactor gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1608 Thena_1609 Thena_1609 Thena_1609 1660054 1660443 - protein of unknown function DUF134 COGs: COG1342 DNA-binding protein~InterPro IPR002852~KEGG: tit:Thit_1659 protein of unknown function DUF134~PFAM: Uncharacterised protein family UPF0251~SPTR: UPF0251 protein Thit_1659%3B~manually curated~IMG reference gene:2504785025~PFAM: Protein of unknown function DUF134 gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1609 Thena_1610 Thena_1610 Thena_1610 1660535 1661758 - diguanylate phosphodiesterase metal dependent hydrolase domain protein COGs: COG3434 signal transduction protein containing EAL and modified HD-GYP domains~InterPro IPR001633:IPR013976~KEGG: dhd:Dhaf_3594 diguanylate phosphodiesterase~PFAM: Diguanylate phosphodiesterase%2C predicted%3B Metal-dependent hydrolase HDOD~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785026~PFAM: EAL domain%3B HDOD domain gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1610 Thena_1611 Thena_1611 Thena_1611 1661875 1663065 - chromate transporter%2C chromate ion transporter (CHR) family COGs: COG2059 Chromate transport protein ChrA~InterPro IPR014047:IPR003370~KEGG: mfe:Mefer_1074 chromate transporter%2C chromate ion transporter (CHR) family~PFAM: Chromate transporter region~SPTR: Chromate transporter%2C chromate ion transporter (CHR) family%3B~TIGRFAM: Chromate transporter~IMG reference gene:2504785027~PFAM: Chromate transporter~TIGRFAM: chromate transporter%2C chromate ion transporter (CHR) family gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1611 Thena_1612 Thena_1612 Thena_1612 1663077 1663457 - HEPN domain protein InterPro IPR007842~PFAM: HEPN~IMG reference gene:2504785028~PFAM: HEPN domain gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1612 Thena_1613 Thena_1613 Thena_1613 1663529 1664113 + selenium metabolism protein YedF InterPro IPR019870~KEGG: ipo:Ilyop_2302 selenium metabolism protein YedF~SPTR: Selenium metabolism protein YedF%3B~TIGRFAM: SirA-related%2C selenium metabolism~IMG reference gene:2504785029~PFAM: SirA-like protein%3B DsrE/DsrF-like family~TIGRFAM: selenium metabolism protein YedF gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1613 Thena_1614 Thena_1614 Thena_1614 1664118 1664867 - methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: chy:CHY_0134 signal tranducer domain-containing protein~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Signal tranducer domain protein%3B~IMG reference gene:2504785030~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1614 Thena_1615 Thena_1615 Thena_1615 1664961 1665851 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: chy:CHY_0469 hypothetical protein~PFAM: Protein of unknown function DUF6%2C transmembrane~SPTR: Putative membrane protein%3B~IMG reference gene:2504785031~PFAM: EamA-like transporter family gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1615 Thena_1616 Thena_1616 Thena_1616 1665848 1666711 + Xylose isomerase domain-containing protein TIM barrel COGs: COG0648 Endonuclease IV~InterPro IPR001719:IPR012307~KEGG: cow:Calow_1439 xylose isomerase domain-containing protein tim barrel~PFAM: Xylose isomerase%2C TIM barrel domain~SMART: Endodeoxyribonuclease IV~SPTR: Xylose isomerase domain protein TIM barrel%3B~IMG reference gene:2504785032~PFAM: Xylose isomerase-like TIM barrel gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1616 Thena_1617 Thena_1617 Thena_1617 1666683 1667057 + hypothetical protein KEGG: dhd:Dhaf_4083 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785033~PFAM: Protein of unknown function (DUF964) gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1617 Thena_1618 Thena_1618 Thena_1618 1667065 1667406 - rubredoxin COGs: COG4802 Ferredoxin-thioredoxin reductase catalytic subunit~KEGG: tye:THEYE_A1879 rubredoxin~SPTR: Rubredoxin%3B~IMG reference gene:2504785034~PFAM: Ferredoxin thioredoxin reductase catalytic beta chain gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1618 Thena_1619 Thena_1619 Thena_1619 1667410 1667670 - glutaredoxin InterPro IPR002109~KEGG: dal:Dalk_2923 glutaredoxin~PFAM: Glutaredoxin~SPTR: Glutaredoxin%3B~IMG reference gene:2504785035~PFAM: Glutaredoxin gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1619 Thena_1620 Thena_1620 Thena_1620 1667684 1667977 - hypothetical protein IMG reference gene:2504785036 gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1620 Thena_1621 Thena_1621 Thena_1621 1668061 1668228 - hypothetical protein IMG reference gene:2504785037 gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1621 Thena_1622 Thena_1622 Thena_1622 1668521 1671070 + UTP-GlnB uridylyltransferase%2C GlnD COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase~HAMAP: Protein-PII uridylyltransferase~InterPro IPR010043:IPR013546:IPR006674:IPR002912~KEGG: gbm:Gbem_1877 GlnB (protein PII) uridylyltransferase%2C GlnD~PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase%3B Metal-dependent phosphohydrolase%2C HD region%2C subdomain%3B Amino acid-binding ACT~PRIAM: [Protein-PII] uridylyltransferase~SPTR: GlnB (Protein PII) uridylyltransferase%2C GlnD%3B~IMG reference gene:2504785038~PFAM: GlnD PII-uridylyltransferase%3B HD domain~TIGRFAM: [Protein-PII] uridylyltransferase gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1622 Thena_1623 Thena_1623 Thena_1623 1671195 1672328 + hypothetical protein KEGG: sdl:Sdel_0746 amidase%2C hydantoinase/carbamoylase family~SPTR: N-carbamoyl-L-amino acid hydrolase (L-carbamoylase)%3B~IMG reference gene:2504785039 gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1623 Thena_1624 Thena_1624 Thena_1624 1672325 1673203 + UPF0042 nucleotide-binding protein yhbJ COGs: COG1660 P-loop-containing kinase~HAMAP: ATPase%2C P-loop-containing~InterPro IPR005337~KEGG: ckn:Calkro_2300 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785040~PFAM: P-loop ATPase protein family gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1624 Thena_1625 Thena_1625 Thena_1625 1673204 1674508 + Uncharacterized protein family UPF0052 COGs: COG0391 conserved hypothetical protein~InterPro IPR010119:IPR002882~KEGG: aar:Acear_0318 protein of unknown function UPF0052 and CofD~PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Uncharacterised protein family UPF0052~IMG reference gene:2504785041~PFAM: Uncharacterised protein family UPF0052~TIGRFAM: conserved hypothetical protein%2C cofD-related gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1625 Thena_1626 Thena_1626 Thena_1626 1674657 1675520 + Sporulation regulator WhiA COGs: COG1481 conserved hypothetical protein~InterPro IPR003802~KEGG: ccb:Clocel_0377 hypothetical protein~PFAM: Sporulation regulator WhiA~SPTR: Putative sporulation transcription regulator whiA%3B~TIGRFAM: Sporulation regulator WhiA~IMG reference gene:2504785042~PFAM: Sporulation Regulator WhiA C terminal domain~TIGRFAM: conserved hypothetical protein gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1626 Thena_1627 Thena_1627 Thena_1627 1675531 1676538 + glyceraldehyde-3-phosphate dehydrogenase%2C type I COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase~InterPro IPR006424:IPR020828:IPR020829~KEGG: cpc:Cpar_1570 glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)~SPTR: Glyceraldehyde-3-phosphate dehydrogenase%2C type I%3B~TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase%2C type I~IMG reference gene:2504785043~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1627 Thena_1628 Thena_1628 Thena_1628 1676630 1677820 + Phosphoglycerate kinase COGs: COG0126 3-phosphoglycerate kinase~HAMAP: Phosphoglycerate kinase~InterPro IPR001576~KEGG: tnp:Tnap_0485 phosphoglycerate kinase~PFAM: Phosphoglycerate kinase~PRIAM: Phosphoglycerate kinase~SPTR: Phosphoglycerate kinase%3B~IMG reference gene:2504785044~PFAM: Phosphoglycerate kinase gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1628 Thena_1629 Thena_1629 Thena_1629 1677822 1678520 + triosephosphate isomerase COGs: COG0149 Triosephosphate isomerase~InterPro IPR000652~KEGG: aae:aq_360 triosephosphate isomerase~PFAM: Triosephosphate isomerase~PRIAM: Triose-phosphate isomerase~SPTR: Triosephosphate isomerase%3B~TIGRFAM: Triosephosphate isomerase~IMG reference gene:2504785045~PFAM: Triosephosphate isomerase~TIGRFAM: triosephosphate isomerase gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1629 Thena_1630 Thena_1630 Thena_1630 1678562 1680067 + 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase COGs: COG0696 Phosphoglyceromutase~HAMAP: Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~InterPro IPR005995:IPR011258:IPR006124~KEGG: clj:CLJU_c39120 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase~PFAM: BPG-independent PGAM%2C N-terminal%3B Metalloenzyme~PRIAM: Phosphoglycerate mutase~SPTR: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase%3B~TIGRFAM: Phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~IMG reference gene:2504785046~PFAM: Metalloenzyme superfamily%3B BPG-independent PGAM N-terminus (iPGM_N)~TIGRFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1630 Thena_1631 Thena_1631 Thena_1631 1680088 1681014 + hypothetical protein KEGG: mfe:Mefer_0504 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785047~PFAM: Uncharacterised protein family (UPF0104)~TIGRFAM: conserved hypothetical protein gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1631 Thena_1632 Thena_1632 Thena_1632 1681101 1682120 - (S)-2-hydroxy-acid oxidase COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase~InterPro IPR000262~KEGG: drm:Dred_1257 FMN-dependent alpha-hydroxy acid dehydrogenase~PFAM: FMN-dependent dehydrogenase~PRIAM: (S)-2-hydroxy-acid oxidase~SPTR: FMN-dependent alpha-hydroxy acid dehydrogenase%3B~IMG reference gene:2504785048~PFAM: FMN-dependent dehydrogenase gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1632 Thena_1633 Thena_1633 Thena_1633 1682249 1683544 - Na+/solute symporter COGs: COG4147 symporter~InterPro IPR001734~KEGG: cja:CJA_1085 sodium:solute symporter family protein~PFAM: Sodium/solute symporter~SPTR: Acetate permease%3B~IMG reference gene:2504785049~PFAM: Sodium:solute symporter family gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1633 Thena_1634 Thena_1634 Thena_1634 1683579 1683842 - protein of unknown function DUF485 InterPro IPR007436~KEGG: hth:HTH_1562 hypothetical protein~PFAM: Protein of unknown function DUF485~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785050~PFAM: Protein of unknown function%2C DUF485 gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1634 Thena_1635 Thena_1635 Thena_1635 1683930 1684268 - alkylhydroperoxidase like protein%2C AhpD family COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit~InterPro IPR004675:IPR003779~KEGG: smr:Smar_0119 alkylhydroperoxidase~PFAM: Carboxymuconolactone decarboxylase~SPTR: Alkylhydroperoxidase like protein%2C AhpD family%3B~TIGRFAM: Alkylhydroperoxidase AhpD core~IMG reference gene:2504785051~PFAM: Carboxymuconolactone decarboxylase family~TIGRFAM: alkylhydroperoxidase AhpD family core domain gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1635 Thena_1636 Thena_1636 Thena_1636 1684517 1685071 - GPR1/FUN34/yaaH family protein COGs: COG1584 membrane protein~InterPro IPR000791~KEGG: rci:RCIX138 hypothetical protein~PFAM: GPR1/FUN34/yaaH~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785052~PFAM: GPR1/FUN34/yaaH family gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1636 Thena_1637 Thena_1637 Thena_1637 1685096 1687141 - Acetate--CoA ligase COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase~InterPro IPR000873~KEGG: reh:H16_A1616 acetyl-coenzyme A synthetase~PFAM: AMP-dependent synthetase/ligase~PRIAM: Acetate--CoA ligase~SPTR: Acetyl-coenzyme A synthetase%3B~IMG reference gene:2504785053~PFAM: Domain of unknown function (DUF3448)%3B AMP-binding enzyme~TIGRFAM: acetate--CoA ligase gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1637 Thena_1638 Thena_1638 Thena_1638 1687394 1688443 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR000587:IPR000994~KEGG: peptidase M24~PFAM: Peptidase M24%2C structural domain%3B Creatinase~SPTR: Peptidase M24%3B~IMG reference gene:2504785054~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1638 Thena_1639 Thena_1639 Thena_1639 1688427 1689137 - Sulfate-transporting ATPase COGs: COG1137 ABC-type (unclassified) transport system ATPase component~InterPro IPR003593:IPR003439~KEGG: cpi:Cpin_0868 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Sulfate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related protein%3B~IMG reference gene:2504785055~PFAM: ABC transporter gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1639 Thena_1640 Thena_1640 Thena_1640 1689130 1689816 - Ribonuclease 3 COGs: COG0571 dsRNA-specific ribonuclease~HAMAP: Ribonuclease III%2C bacterial~InterPro IPR011907:IPR000999:IPR001159~KEGG: ddf:DEFDS_0155 ribonuclease III~PFAM: Ribonuclease III%3B Double-stranded RNA binding~PRIAM: Ribonuclease III~SMART: Ribonuclease III%3B Double-stranded RNA binding~SPTR: Ribonuclease 3%3B~TIGRFAM: Ribonuclease III%2C bacterial~IMG reference gene:2504785056~PFAM: RNase3 domain%3B Double-stranded RNA binding motif~TIGRFAM: ribonuclease III%2C bacterial gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1640 Thena_1641 Thena_1641 Thena_1641 1689842 1690900 - Allophanate hydrolase COGs: COG1984 Allophanate hydrolase subunit 2~InterPro IPR003778~KEGG: aar:Acear_0492 UreA amidolyase related protein~PFAM: Allophanate hydrolase subunit 2~PRIAM: Allophanate hydrolase~SMART: Allophanate hydrolase subunit 2~SPTR: Urea amidolyase related protein%3B~IMG reference gene:2504785057~PFAM: Allophanate hydrolase subunit 2~TIGRFAM: biotin-dependent carboxylase uncharacterized domain gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1641 Thena_1642 Thena_1642 Thena_1642 1690884 1691549 - Conserved hypothetical protein CHP00370 COGs: COG2049 Allophanate hydrolase subunit 1~InterPro IPR010016:IPR003833~KEGG: tba:TERMP_01041 allophanate hydrolase 2 subunit 1~PFAM: Allophanate hydrolase subunit 1~SMART: Allophanate hydrolase subunit 1~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Conserved hypothetical protein CHP00370~IMG reference gene:2504785058~PFAM: Allophanate hydrolase subunit 1~TIGRFAM: TIGR00370 family protein gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1642 Thena_1643 Thena_1643 Thena_1643 1691540 1692301 - LamB/YcsF family protein COGs: COG1540 conserved hypothetical protein~InterPro IPR005501~KEGG: pfu:PF1272 LamB/YcsF family protein~PFAM: LamB/YcsF~SPTR: UPF0271 protein PF1272%3B~IMG reference gene:2504785059~PFAM: LamB/YcsF family gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1643 Thena_1644 Thena_1644 Thena_1644 1692295 1693575 - Seryl-tRNA synthetase COGs: COG0172 Seryl-tRNA synthetase~HAMAP: Seryl-tRNA synthetase~InterPro IPR002317:IPR015866:IPR002314~KEGG: gwc:GWCH70_0014 seryl-tRNA synthetase~PFAM: Aminoacyl-tRNA synthetase%2C class II (G/ H/ P/ S)%2C conserved region%3B Seryl-tRNA synthetase%2C class IIa%2C N-terminal~PRIAM: Serine--tRNA ligase~SPTR: Seryl-tRNA synthetase%3B~TIGRFAM: Seryl-tRNA synthetase%2C class IIa~IMG reference gene:2504785060~PFAM: Seryl-tRNA synthetase N-terminal domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: seryl-tRNA synthetase gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1644 Thena_1645 Thena_1645 Thena_1645 1693568 1694416 - Prephenate dehydratase COGs: COG0077 Prephenate dehydratase~InterPro IPR001086:IPR002912~KEGG: mpd:MCP_1674 prephenate dehydratase~PFAM: Prephenate dehydratase%3B Amino acid-binding ACT~PRIAM: Prephenate dehydratase~SPTR: Prephenate dehydratase%3B~IMG reference gene:2504785061~PFAM: Prephenate dehydratase%3B ACT domain gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1645 Thena_1646 Thena_1646 Thena_1646 1694701 1695894 + major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: sat:SYN_01220 macrolide-efflux protein~PFAM: Major facilitator superfamily MFS-1~SPTR: Macrolide-efflux protein%3B~IMG reference gene:2504785062~PFAM: Bacterial protein of unknown function (DUF894) gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1646 Thena_1647 Thena_1647 Thena_1647 1696015 1696599 + hypothetical protein KEGG: pca:Pcar_1581 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785063 gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1647 Thena_1648 Thena_1648 Thena_1648 1696631 1696840 + hypothetical protein IMG reference gene:2504785064 gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1648 Thena_1649 Thena_1649 Thena_1649 1696862 1697167 + hypothetical protein KEGG: hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785065 gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1649 Thena_1650 Thena_1650 Thena_1650 1697248 1697610 + Dinitrogenase iron-molybdenum cofactor biosynthesis protein COGs: COG1433 conserved hypothetical protein~InterPro IPR003731~KEGG: dat:HRM2_42460 hypothetical protein~PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785066~PFAM: Dinitrogenase iron-molybdenum cofactor gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1650 Thena_1651 Thena_1651 Thena_1651 1697607 1698461 + Cobyrinic acid ac-diamide synthase COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain~InterPro IPR002586:IPR001450~KEGG: ppd:Ppro_1954 cobyrinic acid a%2Cc-diamide synthase~PFAM: Cobyrinic acid a%2Cc-diamide synthase%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~IMG reference gene:2504785067~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B 4Fe-4S binding domain gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1651 Thena_1652 Thena_1652 Thena_1652 1698451 1699326 + Cobyrinic acid ac-diamide synthase COGs: COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain~InterPro IPR002586:IPR001450~KEGG: ppd:Ppro_1951 cobyrinic acid a%2Cc-diamide synthase~PFAM: Cobyrinic acid a%2Cc-diamide synthase%3B 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~IMG reference gene:2504785068~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1652 Thena_1653 Thena_1653 Thena_1653 1699342 1700595 + sigma54 specific transcriptional regulator with PAS/PAC sensor%2C Fis family COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR000014:IPR013656:IPR002078:IPR002197~KEGG: pca:Pcar_1580 transcriptional regulator~PFAM: RNA polymerase sigma factor 54%2C interaction%3B PAS fold-4%3B Helix-turn-helix%2C Fis-type~SMART: PAS~SPTR: Transcriptional regulator%3B~TIGRFAM: PAS~IMG reference gene:2504785069~PFAM: Bacterial regulatory protein%2C Fis family%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1653 Thena_1654 Thena_1654 Thena_1654 1700676 1701113 + hypothetical protein IMG reference gene:2504785070 gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1654 Thena_1655 Thena_1655 Thena_1655 1701114 1702253 + glycosyl transferase family 19 COGs: COG0763 Lipid A disaccharide synthetase~InterPro IPR003835~KEGG: nhl:Nhal_1230 lipid-A-disaccharide synthase~PFAM: Glycosyl transferase%2C family 19~SPTR: Lipid-A-disaccharide synthase%3B~IMG reference gene:2504785071~PFAM: Lipid-A-disaccharide synthetase gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1655 Thena_1656 Thena_1656 Thena_1656 1702231 1702917 - Endonuclease V COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V)~HAMAP: Endonuclease V~InterPro IPR007581~KEGG: rmr:Rmar_0625 deoxyribonuclease V~PFAM: Endonuclease V~PRIAM: Deoxyribonuclease V~SPTR: Endonuclease V%3B~IMG reference gene:2504785072~PFAM: Endonuclease V gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1656 Thena_1657 Thena_1657 Thena_1657 1702935 1703573 - molybdopterin-guanine dinucleotide biosynthesis protein B COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein~InterPro IPR004435~KEGG: sfu:Sfum_3074 molybdopterin-guanine dinucleotide biosynthesis MobB region~PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region~SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B%3B~TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region~IMG reference gene:2504785073~PFAM: Molybdopterin guanine dinucleotide synthesis protein B~TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1657 Thena_1658 Thena_1658 Thena_1658 1703592 1704578 - hypothetical protein IMG reference gene:2504785074 gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1658 Thena_1659 Thena_1659 Thena_1659 1704615 1705421 - Shikimate dehydrogenase COGs: COG0169 Shikimate 5-dehydrogenase~HAMAP: Shikimate dehydrogenase~InterPro IPR011342:IPR013708:IPR006151~KEGG: fpl:Ferp_0898 shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding%2C N-terminal%3B Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase~SPTR: Shikimate dehydrogenase%3B~TIGRFAM: Quinate/shikimate 5-dehydrogenase~IMG reference gene:2504785075~PFAM: Shikimate dehydrogenase substrate binding domain%3B Shikimate / quinate 5-dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1659 Thena_1660 Thena_1660 Thena_1660 1705408 1706469 - 3-dehydroquinate synthase COGs: COG0337 3-dehydroquinate synthetase~HAMAP: 3-dehydroquinate synthase~InterPro IPR016037:IPR002658~KEGG: nam:NAMH_0479 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase AroB~PRIAM: 3-dehydroquinate synthase~SPTR: 3-dehydroquinate synthase%3B~TIGRFAM: 3-dehydroquinate synthase AroB%2C subgroup~IMG reference gene:2504785076~PFAM: 3-dehydroquinate synthase~TIGRFAM: 3-dehydroquinate synthase gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1660 Thena_1661 Thena_1661 Thena_1661 1706494 1707018 - Shikimate kinase COGs: COG0703 Shikimate kinase~HAMAP: Shikimate kinase~InterPro IPR000623~KEGG: shikimate kinase~PFAM: Shikimate kinase~PRIAM: Shikimate kinase~SPTR: Shikimate kinase%3B~IMG reference gene:2504785077~PFAM: Shikimate kinase gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1661 Thena_1662 Thena_1662 Thena_1662 1707015 1708220 - chorismate synthase COGs: COG0082 Chorismate synthase~InterPro IPR000453~KEGG: dth:DICTH_0913 chorismate synthase~PFAM: Chorismate synthase~PRIAM: Chorismate synthase~SPTR: Chorismate synthase%3B~TIGRFAM: Chorismate synthase~IMG reference gene:2504785078~PFAM: Chorismate synthase~TIGRFAM: chorismate synthase gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1662 Thena_1663 Thena_1663 Thena_1663 1708204 1709223 - glycosyl transferase family 9 COGs: COG0859 ADP-heptose:LPS heptosyltransferase~InterPro IPR002201~KEGG: str:Sterm_3089 glycosyl transferase family 9~PFAM: Glycosyl transferase%2C family 9~SPTR: Glycosyl transferase family 9%3B~IMG reference gene:2504785079~PFAM: Glycosyltransferase family 9 (heptosyltransferase) gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1663 Thena_1664 Thena_1664 Thena_1664 1709213 1710238 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: mpl:Mpal_0362 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~IMG reference gene:2504785080~PFAM: Glycosyl transferases group 1 gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1664 Thena_1665 Thena_1665 Thena_1665 1710380 1711351 - protein of unknown function DUF1022 COGs: COG3660 nucleoside-diphosphate-sugar epimerase~InterPro IPR009367~KEGG: cha:CHAB381_0656 hypothetical protein~PFAM: Protein of unknown function DUF1022~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785081~PFAM: Protein of unknown function (DUF1022) gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1665 Thena_1666 Thena_1666 Thena_1666 1711355 1712992 - peptidase S55 SpoIVB KEGG: aar:Acear_2203 peptidase S55 SpoIVB~SPTR: Peptidase S55 SpoIVB%3B~IMG reference gene:2504785082~PFAM: SpoIVB peptidase S55 gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1666 Thena_1667 Thena_1667 Thena_1667 1713290 1713718 + UspA domain-containing protein InterPro IPR006016~KEGG: iho:Igni_0456 UspA domain-containing protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504785083~PFAM: Universal stress protein family gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1667 Thena_1668 Thena_1668 Thena_1668 1713767 1714009 + hypothetical protein KEGG: dma:DMR_10840 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785084 gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1668 Thena_1669 Thena_1669 Thena_1669 1714011 1715090 + protein of unknown function DUF81 COGs: COG0730 permease~InterPro IPR002781~KEGG: dba:Dbac_2673 protein of unknown function DUF81~PFAM: Protein of unknown function DUF81~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785085~PFAM: Sulfite exporter TauE/SafE gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1669 Thena_1670 Thena_1670 Thena_1670 1715100 1716044 + UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: hla:Hlac_1706 UspA domain protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504785086~PFAM: Universal stress protein family gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1670 Thena_1671 Thena_1671 Thena_1671 1716052 1717017 + phosphonate ABC transporter%2C periplasmic phosphonate-binding protein COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component~InterPro IPR005770~KEGG: cni:Calni_0643 phosphonate abc transporter%2C periplasmic phosphonate-binding protein~SPTR: Phosphonate ABC transporter%2C periplasmic phosphonate-binding protein%3B~TIGRFAM: Phosphonate-binding periplasmic protein~IMG reference gene:2504785087~PFAM: NMT1/THI5 like~TIGRFAM: phosphate/phosphite/phosphonate ABC transporters%2C periplasmic binding protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1671 Thena_1672 Thena_1672 Thena_1672 1717001 1718407 + putative signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterPro IPR003660:IPR003594~KEGG: ATPase ATP-binding domain-containing protein~PFAM: ATP-binding region%2C ATPase-like%3B HAMP linker domain~SMART: HAMP linker domain%3B ATP-binding region%2C ATPase-like~SPTR: Histidine kinase%3B~IMG reference gene:2504785088~PFAM: Histidine kinase%3B HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1672 Thena_1673 Thena_1673 Thena_1673 1718367 1719062 + two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789:IPR000792~KEGG: dhd:Dhaf_1230 two component transcriptional regulator%2C LuxR family~PFAM: Signal transduction response regulator%2C receiver region%3B Transcription regulator LuxR%2C C-terminal~SMART: Signal transduction response regulator%2C receiver region%3B Transcription regulator LuxR%2C C-terminal~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785089~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1673 Thena_1674 Thena_1674 Thena_1674 1719059 1721665 - putative PAS/PAC sensor protein COGs: COG2202 FOG: PAS/PAC domain~InterPro IPR000014:IPR001610:IPR013767:IPR013656~KEGG: tye:THEYE_A0373 sensory box histidine kinase%2C putative~PFAM: PAS fold-4%3B PAS fold~SMART: PAS%3B PAC motif~SPTR: Sensory box histidine kinase%2C putative%3B~TIGRFAM: PAS~IMG reference gene:2504785090~PFAM: PAS fold~TIGRFAM: PAS domain S-box gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1674 Thena_1675 Thena_1675 Thena_1675 1721717 1722106 - thioesterase superfamily protein COGs: COG5496 thioesterase~InterPro IPR006683~KEGG: amt:Amet_0908 thioesterase family protein~PFAM: Thioesterase superfamily~SPTR: Thioesterase family protein%3B~IMG reference gene:2504785091~PFAM: Thioesterase superfamily gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1675 Thena_1676 Thena_1676 Thena_1676 1722176 1723477 - hypothetical protein KEGG: sun:SUN_0884 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785092 gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1676 Thena_1677 Thena_1677 Thena_1677 1723572 1724228 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 1 COGs: COG0546 phosphatase~InterPro IPR006439:IPR005834~KEGG: HAD-superfamily hydrolase~PFAM: Haloacid dehalogenase-like hydrolase~PRIAM: Inorganic diphosphatase~SPTR: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1%3B~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 1~IMG reference gene:2504785093~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 1 with third motif having Dx(3-4)D or Dx(3-4)E gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1677 Thena_1678 Thena_1678 Thena_1678 1724253 1725041 + Enoyl-(acyl-carrier-protein) reductase (NADH) COGs: COG0623 Enoyl-(acyl-carrier-protein)~KEGG: tal:Thal_0538 short-chain dehydrogenase/reductase SDR~PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH)~SPTR: Short-chain dehydrogenase/reductase SDR%3B~IMG reference gene:2504785094~PFAM: short chain dehydrogenase gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1678 Thena_1679 Thena_1679 Thena_1679 1725121 1726401 - ammonium transporter COGs: COG0004 Ammonia permease~InterPro IPR001905~KEGG: mmg:MTBMA_c10420 ammonium transporter~PFAM: Ammonium transporter~SPTR: Ammonium transporter%3B~TIGRFAM: Ammonium transporter~IMG reference gene:2504785095~PFAM: Ammonium Transporter Family~TIGRFAM: ammonium transporter gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1679 Thena_1680 Thena_1680 Thena_1680 1726523 1727941 - ammonium transporter COGs: COG0004 Ammonia permease~InterPro IPR001905~KEGG: mth:MTH663 ammonium transporter~PFAM: Ammonium transporter~SPTR: Putative ammonium transporter MTH_663%3B~TIGRFAM: Ammonium transporter~IMG reference gene:2504785096~PFAM: Ammonium Transporter Family~TIGRFAM: ammonium transporter gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1680 Thena_1681 Thena_1681 Thena_1681 1727961 1728305 - nitrogen regulatory protein P-II COGs: COG0347 Nitrogen regulatory protein PII~InterPro IPR002187~KEGG: dal:Dalk_5099 nitrogen regulatory protein P-II~PFAM: Nitrogen regulatory protein PII~SPTR: Nitrogen regulatory protein P-II%3B~IMG reference gene:2504785097~PFAM: Nitrogen regulatory protein P-II gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1681 Thena_1682 Thena_1682 Thena_1682 1728573 1729814 - (Uracil-5)-methyltransferase COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase~InterPro IPR010280~KEGG: taf:THA_1877 23S rRNA (uracil-5-)-methyltransferase RumA~PFAM: (Uracil-5)-methyltransferase~SPTR: 23S rRNA (Uracil-5-)-methyltransferase RumA%3B~IMG reference gene:2504785098~PFAM: tRNA (Uracil-5-)-methyltransferase gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1682 Thena_1683 Thena_1683 Thena_1683 1729814 1731841 - flagellar biosynthesis protein FlhA COGs: COG1298 Flagellar biosynthesis pathway component FlhA~InterPro IPR006301:IPR001712~KEGG: swo:Swol_0869 flagellar biosynthesis protein FlhA~PFAM: Type III secretion system FHIPEP~SPTR: Flagella-associated protein%3B~TIGRFAM: Flagellar biosynthesis protein FlhA~IMG reference gene:2504785099~PFAM: FHIPEP family~TIGRFAM: flagellar biosynthesis protein FlhA gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1683 Thena_1684 Thena_1684 Thena_1684 1731842 1732294 - hypothetical protein KEGG: nth:Nther_1395 flagellar export protein FliJ~SPTR: Flagellar export protein FliJ%3B~IMG reference gene:2504785100~PFAM: Flagellar FliJ protein~TIGRFAM: flagellar export protein FliJ gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1684 Thena_1685 Thena_1685 Thena_1685 1732294 1733301 - flagellar motor switch protein FliG COGs: COG1536 Flagellar motor switch protein~InterPro IPR000090~KEGG: tjr:TherJR_1541 flagellar motor switch protein FliG~PFAM: Flagellar motor switch protein FliG~SPTR: Flagellar motor switch protein FliG%3B~TIGRFAM: Flagellar motor switch protein FliG~IMG reference gene:2504785101~PFAM: FliG C-terminal domain~TIGRFAM: flagellar motor switch protein FliG gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1685 Thena_1686 Thena_1686 Thena_1686 1733302 1734849 - flagellar M-ring protein FliF COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein~InterPro IPR000067:IPR006182:IPR013556~KEGG: tjr:TherJR_1542 flagellar M-ring protein FliF~PFAM: Secretory protein YscJ/FliF%3B Flagellar M-ring C-terminal~SPTR: Flagellar M-ring protein FliF%3B~TIGRFAM: Flagellar FliF M-ring protein~manually curated~IMG reference gene:2504785102~PFAM: Secretory protein of YscJ/FliF family%3B Flagellar M-ring protein C-terminal~TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1686 Thena_1687 Thena_1687 Thena_1687 1734854 1735138 - flagellar hook-basal body complex protein FliE InterPro IPR001624~KEGG: chy:CHY_0992 flagellar hook-basal body complex protein FliE~PFAM: Flagellar hook-basal body complex protein FliE~SPTR: Flagellar hook-basal body complex protein fliE%3B~IMG reference gene:2504785103~PFAM: Flagellar hook-basal body complex protein FliE~TIGRFAM: flagellar hook-basal body complex protein FliE gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1687 Thena_1688 Thena_1688 Thena_1688 1735135 1735539 - flagellar basal-body rod protein FlgC COGs: COG1558 Flagellar basal body rod protein~InterPro IPR006299:IPR001444:IPR010930~KEGG: pmo:Pmob_1685 flagellar basal-body rod protein FlgC~PFAM: Flagellar basal body rod protein%2C N-terminal%3B Protein of unknown function DUF1078%2C C-terminal~SPTR: Flagellar basal-body rod protein FlgC%3B~TIGRFAM: Flagellar basal-body rod protein FlgC~IMG reference gene:2504785104~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgC gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1688 Thena_1689 Thena_1689 Thena_1689 1735614 1736036 - Flagellar assembly factor fliW COGs: COG1699 conserved hypothetical protein~HAMAP: Flagellar assembly factor FliW~InterPro IPR003775~KEGG: dsy:DSY3025 hypothetical protein~PFAM: Flagellar assembly factor FliW~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785105~PFAM: FliW protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1689 Thena_1690 Thena_1690 Thena_1690 1736070 1736945 - flagellar hook-associated protein 3 COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR013384:IPR001492~KEGG: ttm:Tthe_2194 flagellar hook-associated protein 3~PFAM: Flagellin%2C N-terminal~SPTR: Flagellar hook-associated protein 3%3B~TIGRFAM: Flagellar hook-associated protein 3~IMG reference gene:2504785106~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region~TIGRFAM: flagellar hook-associated protein 3 gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1690 Thena_1691 Thena_1691 Thena_1691 1736962 1739772 - flagellar hook-associated protein FlgK COGs: COG1256 Flagellar hook-associated protein~InterPro IPR002371:IPR001444:IPR010930~KEGG: tjr:TherJR_2798 flagellar hook-associated protein FlgK~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar hook-associated protein FlgK%3B~TIGRFAM: Flagellar hook-associated protein%2C FlgK~IMG reference gene:2504785107~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar hook-associated protein FlgK gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1691 Thena_1692 Thena_1692 Thena_1692 1739772 1740098 - hypothetical protein IMG reference gene:2504785108~PFAM: FlgN protein gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1692 Thena_1693 Thena_1693 Thena_1693 1740095 1740361 - hypothetical protein IMG reference gene:2504785109 gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1693 Thena_1694 Thena_1694 Thena_1694 1740413 1740769 - hypothetical protein KEGG: aac:Aaci_2567 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated~IMG reference gene:2504785110 gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1694 Thena_1695 Thena_1695 Thena_1695 1740771 1741091 - pseudogene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1695 Thena_1696 Thena_1696 Thena_1696 1741126 1742229 - Flagellar P-ring protein COGs: COG1706 Flagellar basal-body P-ring protein~HAMAP: Flagellar P-ring protein~InterPro IPR001782~KEGG: flagellar P-ring protein~PFAM: Flagellar P-ring protein~SPTR: Flagellar P-ring protein%3B~IMG reference gene:2504785112~PFAM: Flagellar P-ring protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1696 Thena_1697 Thena_1697 Thena_1697 1742239 1742847 - flagellar L-ring protein COGs: COG2063 Flagellar basal body L-ring protein~InterPro IPR000527~KEGG: flagellar L-ring protein~PFAM: Flagellar L-ring protein~SPTR: Flagellar L-ring protein (Basal body L-ring protein)%3B~IMG reference gene:2504785113~PFAM: Flagellar L-ring protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1697 Thena_1698 Thena_1698 Thena_1698 1742840 1743517 - flagella basal body P-ring formation protein FlgA COGs: COG1261 Flagellar basal body P-ring biosynthesis protein~InterPro IPR017585:IPR013974~KEGG: tye:THEYE_A2060 flagella basal body P-ring formation protein FlgA~PFAM: SAF domain~SPTR: Flagellar basal-body P-ring formation protein FlgA%3B~TIGRFAM: Flagella basal body P-ring formation protein FlgA~IMG reference gene:2504785114~PFAM: SAF domain~TIGRFAM: flagella basal body P-ring formation protein FlgA gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1698 Thena_1699 Thena_1699 Thena_1699 1743529 1744317 - flagellar basal-body rod protein FlgG COGs: COG4786 Flagellar basal body rod protein~InterPro IPR020013:IPR012834:IPR001444:IPR010930~KEGG: cni:Calni_0447 flagellar basal-body rod protein FlgG~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar basal-body rod protein FlgG%3B~TIGRFAM: Flagellar basal-body rod FlgG%3B Fagellar hook-basal body protein%2C FlgE/F/G~manually curated~IMG reference gene:2504785115~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgF%3B fagellar hook-basal body proteins%3B flagellar basal-body rod protein FlgG%2C Gram-negative bacteria gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1699 Thena_1700 Thena_1700 Thena_1700 1744372 1745127 - flagellar hook-basal body protein COGs: COG4786 Flagellar basal body rod protein~InterPro IPR020013:IPR001444:IPR010930~KEGG: hor:Hore_16580 flagellar basal body rod protein~PFAM: Flagellar basal body rod protein%2C N-terminal%3B Protein of unknown function DUF1078%2C C-terminal~SPTR: Flagellar basal body rod protein%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~IMG reference gene:2504785116~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: fagellar hook-basal body proteins gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1700 Thena_1701 Thena_1701 Thena_1701 1745340 1747322 + PAS sensor protein InterPro IPR000014:IPR013655:IPR013767~KEGG: ppn:Palpr_2639 pas/pac sensor hybrid histidine kinase~PFAM: PAS fold-3%3B PAS fold~SMART: PAS~SPTR: PAS/PAC sensor hybrid histidine kinase%3B~TIGRFAM: PAS~IMG reference gene:2504785117~PFAM: PAS fold~TIGRFAM: PAS domain S-box gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1701 Thena_1702 Thena_1702 Thena_1702 1747360 1748520 + putative signal transduction protein COGs: COG3434 signal transduction protein containing EAL and modified HD-GYP domains~InterPro IPR013976~KEGG: cbe:Cbei_2184 diguanylate phosphodiesterase~PFAM: Metal-dependent hydrolase HDOD~SPTR: Diguanylate phosphodiesterase%3B~IMG reference gene:2504785118~PFAM: HDOD domain gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1702 Thena_1703 Thena_1703 Thena_1703 1748624 1750357 + Aldehyde ferredoxin oxidoreductase COGs: COG2414 Aldehyde:ferredoxin oxidoreductase~InterPro IPR013983:IPR001203~KEGG: putative aldehyde ferredoxin oxidoreductase~PFAM: Aldehyde ferredoxin oxidoreductase%2C C-terminal%3B Aldehyde ferredoxin oxidoreductase%2C N-terminal~PRIAM: Aldehyde ferredoxin oxidoreductase~SMART: Aldehyde ferredoxin oxidoreductase%2C N-terminal~SPTR: Aldehyde:ferredoxin oxidoreductase%2C tungsten-containing%3B~IMG reference gene:2504785119~PFAM: Aldehyde ferredoxin oxidoreductase%2C N-terminal domain%3B Aldehyde ferredoxin oxidoreductase%2C domains 2 %26 3 gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1703 Thena_1704 Thena_1704 Thena_1704 1750357 1750599 + thiamineS protein InterPro IPR003749~PFAM: ThiamineS~IMG reference gene:2504785120~PFAM: ThiS family gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1704 Thena_1705 Thena_1705 Thena_1705 1750560 1751936 - integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003660:IPR003661:IPR003594~KEGG: tte:TTE1017 sensory transduction histidine kinase~PFAM: ATP-binding region%2C ATPase-like%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor region%3B HAMP linker domain~SMART: ATP-binding region%2C ATPase-like%3B Signal transduction histidine kinase%2C subgroup 1%2C dimerisation/phosphoacceptor region%3B HAMP linker domain~SPTR: Sensory transduction histidine kinases%3B~IMG reference gene:2504785121~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1705 Thena_1706 Thena_1706 Thena_1706 1751923 1752615 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: has:Halsa_1753 two component transcriptional regulator%2C winged helix family~PFAM: Signal transduction response regulator%2C receiver region%3B Signal transduction response regulator%2C C-terminal~SMART: Signal transduction response regulator%2C receiver region~SPTR: Two component transcriptional regulator%2C winged helix family%3B~IMG reference gene:2504785122~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1706 Thena_1707 Thena_1707 Thena_1707 1753064 1755232 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR003660:IPR004089~KEGG: tjr:TherJR_0843 methyl-accepting chemotaxis sensory transducer~PFAM: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SMART: Chemotaxis methyl-accepting receptor%2C signalling%3B HAMP linker domain~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~IMG reference gene:2504785123~PFAM: HAMP domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1707 Thena_1708 Thena_1708 Thena_1708 1755283 1755477 - hypothetical protein IMG reference gene:2504785124 gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1708 Thena_1709 Thena_1709 Thena_1709 1755477 1756859 - Uncharacterized protein family UPF0324 COGs: COG2855 membrane protein~InterPro IPR018383~KEGG: chy:CHY_2400 hypothetical protein~PFAM: Uncharacterised protein family UPF0324%2C prokaryote~SPTR: Putative membrane protein%3B~IMG reference gene:2504785125~PFAM: Conserved hypothetical protein 698 gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1709 Thena_1710 Thena_1710 Thena_1710 1757228 1758379 + Quinolinate synthase COGs: COG0379 Quinolinate synthase~InterPro IPR003473~KEGG: tne:Tneu_0531 quinolinate synthetase~PFAM: Quinolinate synthetase A~PRIAM: Quinolinate synthase~SPTR: Quinolinate synthase A%3B~IMG reference gene:2504785126~PFAM: Quinolinate synthetase A protein~TIGRFAM: quinolinate synthetase complex%2C A subunit gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1710 Thena_1711 Thena_1711 Thena_1711 1758376 1759932 + L-aspartate oxidase COGs: COG0029 Aspartate oxidase~InterPro IPR003953~KEGG: rrs:RoseRS_0437 L-aspartate oxidase~PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein%2C N-terminal~PRIAM: L-aspartate oxidase~SPTR: L-aspartate oxidase%3B~IMG reference gene:2504785127~PFAM: domain%3B FAD binding domain~TIGRFAM: L-aspartate oxidase gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1711 Thena_1712 Thena_1712 Thena_1712 1759932 1760783 + Nicotinate-nucleotide diphosphorylase (carboxylating) COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase~InterPro IPR002638~KEGG: dth:DICTH_0588 nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase~PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating)~SPTR: Nicotinate-nucleotide pyrophosphorylase%3B~IMG reference gene:2504785128~PFAM: Quinolinate phosphoribosyl transferase%2C C-terminal domain%3B Quinolinate phosphoribosyl transferase%2C N-terminal domain~TIGRFAM: nicotinate-nucleotide pyrophosphorylase gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1712 Thena_1713 Thena_1713 Thena_1713 1760849 1761415 + intracellular protease%2C PfpI family COGs: COG0693 Putative intracellular protease/amidase~InterPro IPR006286:IPR002818~KEGG: mba:Mbar_A3696 putative intracellular protease~PFAM: ThiJ/PfpI~SPTR: Putative intracellular protease%3B~TIGRFAM: Peptidase C56%2C PfpI~IMG reference gene:2504785129~PFAM: DJ-1/PfpI family~TIGRFAM: intracellular protease%2C PfpI family gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1713 Thena_1714 Thena_1714 Thena_1714 1761627 1761956 - regulatory protein ArsR InterPro IPR001845~KEGG: tmt:Tmath_0944 transcriptional regulator%2C ArsR family~PFAM: HTH transcriptional regulator%2C ArsR~SMART: HTH transcriptional regulator%2C ArsR~SPTR: Transcriptional regulator%2C ArsR family%3B~IMG reference gene:2504785130~PFAM: Bacterial regulatory protein%2C arsR family gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1714 Thena_1715 Thena_1715 Thena_1715 1762212 1763507 + MgtE intracellular region COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)~InterPro IPR000644:IPR006668~KEGG: dae:Dtox_1738 MgtE intracellular region~PFAM: Magnesium transporter%2C MgtE intracellular region%3B Cystathionine beta-synthase%2C core~SPTR: MgtE intracellular region%3B~IMG reference gene:2504785131~PFAM: MgtE intracellular N domain%3B CBS domain~TIGRFAM: Mg2+ transporter (mgtE) gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1715 Thena_1716 Thena_1716 Thena_1716 1763527 1764768 + natural resistance-associated macrophage protein COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family~InterPro IPR001046~KEGG: dae:Dtox_1739 natural resistance-associated macrophage protein~PFAM: Natural resistance-associated macrophage protein~SPTR: Natural resistance-associated macrophage protein%3B~IMG reference gene:2504785132~PFAM: Natural resistance-associated macrophage protein~TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1716 Thena_1717 Thena_1717 Thena_1717 1764818 1765762 - Biotin synthase COGs: COG0502 Biotin synthase~HAMAP: Biotin synthase~InterPro IPR002684:IPR006638:IPR007197:IPR010722~KEGG: pth:PTH_0521 biotin synthase and related enzymes~PFAM: Biotin/thiamin synthesis-associated protein%3B Radical SAM~PRIAM: Biotin synthase~SMART: Elongator protein 3/MiaB/NifB~SPTR: Biotin synthase%3B~TIGRFAM: Biotin synthase~IMG reference gene:2504785133~PFAM: Radical SAM superfamily%3B Biotin and Thiamin Synthesis associated domain~TIGRFAM: biotin synthetase gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1717 Thena_1718 Thena_1718 Thena_1718 1765879 1766769 + hypothetical protein KEGG: saf:SULAZ_0685 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785134 gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1718 Thena_1719 Thena_1719 Thena_1719 1766762 1767421 - NADPH-dependent FMN reductase COGs: COG0655 Multimeric flavodoxin WrbA~InterPro IPR005025~KEGG: cac:CA_C2520 multimeric flavodoxin domain-containing protein~PFAM: NADPH-dependent FMN reductase~SPTR: Multimeric flavodoxin (WrbA) domain containing protein%3B~IMG reference gene:2504785135~PFAM: NADPH-dependent FMN reductase gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1719 Thena_1720 Thena_1720 Thena_1720 1767637 1768386 + metallo-beta-lactamase family protein KEGG: tye:THEYE_A1635 metallo-beta-lactamase family protein~SPTR: Metallo-beta-lactamase family protein%3B~IMG reference gene:2504785136~PFAM: Metallo-beta-lactamase superfamily gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1720 Thena_1721 Thena_1721 Thena_1721 1768437 1768700 - hypothetical protein IMG reference gene:2504785137 gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1721 Thena_1722 Thena_1722 Thena_1722 1769000 1769353 - pseudogene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1722 Thena_1723 Thena_1723 Thena_1723 1769322 1769675 - pseudogene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1723 Thena_1724 Thena_1724 Thena_1724 1777147 1777836 - hypothetical protein KEGG: mru:mru_1184 ATP-dependent DNA helicase UvrD/REP family~SPTR: ATP-dependent DNA helicase UvrD/REP family%3B~IMG reference gene:2504785140~PFAM: Domain of unknown function DUF83 gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1724 Thena_1725 Thena_1725 Thena_1725 1777863 1778111 - hypothetical protein KEGG: hso:HS_1224 hypothetical protein~IMG reference gene:2504785141 gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1725 Thena_1726 Thena_1726 Thena_1726 1778159 1778452 - CRISPR-associated protein Cas2 COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR003799~KEGG: cni:Calni_1597 crispr-associated protein cas2~SPTR: CRISPR-associated protein Cas2%3B~TIGRFAM: Protein of unknown function DUF196~IMG reference gene:2504785142~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated endoribonuclease Cas2 gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1726 Thena_1727 Thena_1727 Thena_1727 1778449 1779483 - CRISPR-associated protein Cas1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR002729~KEGG: aar:Acear_0821 CRISPR-associated protein Cas1~PFAM: CRISPR-associated protein Cas1~SPTR: CRISPR-associated protein Cas1%3B~TIGRFAM: CRISPR-associated protein Cas1~IMG reference gene:2504785143~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated endonuclease Cas1 gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1727 Thena_1728 Thena_1728 Thena_1728 1779480 1781342 - DNA primase small subunit COGs: COG4951 conserved hypothetical protein~KEGG: cni:Calni_1598 DNA primase small subunit~SPTR: DNA primase small subunit%3B~IMG reference gene:2504785144 gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1728 Thena_1729 Thena_1729 Thena_1729 1781320 1782390 - CRISPR-associated RAMP protein%2C Csm5 family InterPro IPR010173:IPR005537~KEGG: cni:Calni_1609 crispr-associated RAMP protein%2C csm5 family~PFAM: Protein of unknown function DUF324~SPTR: CRISPR-associated RAMP protein%2C Csm5 family%3B~TIGRFAM: CRISPR-associated protein%2C TM1807~IMG reference gene:2504785145~PFAM: RAMP superfamily~TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm5 gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1729 Thena_1730 Thena_1730 Thena_1730 1782383 1783315 - hypothetical protein KEGG: drm:Dred_1630 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785146~TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm4 gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1730 Thena_1731 Thena_1731 Thena_1731 1783360 1784037 - CRISPR-associated RAMP protein%2C Csm3 family COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR013412:IPR005537~KEGG: fno:Fnod_1390 CRISPR-associated RAMP Csm3 family protein~PFAM: Protein of unknown function DUF324~SPTR: CRISPR-associated ramp protein%3B~TIGRFAM: CRISPR-associated RAMP Csm3~IMG reference gene:2504785147~PFAM: RAMP superfamily~TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm3%3B CRISPR type III-B/RAMP module RAMP protein Cmr6 gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1731 Thena_1732 Thena_1732 Thena_1732 1784056 1784634 - hypothetical protein IMG reference gene:2504785148~PFAM: Protein of unknown function (DUF310) gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1732 Thena_1733 Thena_1733 Thena_1733 1784637 1787360 - CRISPR-associated protein%2C Csm1 family COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs)~InterPro IPR013408:IPR006674~KEGG: cni:Calni_1613 crispr-associated protein%2C csm1 family~PFAM: Metal-dependent phosphohydrolase%2C HD region%2C subdomain~SPTR: CRISPR-associated protein%3B~TIGRFAM: CRISPR-associated protein Csm1~IMG reference gene:2504785149~PFAM: HD domain~TIGRFAM: CRISPR-associated protein Cas10/Csm1%2C subtype III-A/MTUBE gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1733 Thena_1734 Thena_1734 Thena_1734 1787459 1788709 + CRISPR-associated protein%2C TIGR02710 family InterPro IPR014082~KEGG: dol:Dole_0739 CRISPR-associated TIGR02710 family~PFAM: CRISPR-associated protein%2C Cas02710~SPTR: CRISPR-associated protein Cas02710%3B~TIGRFAM: CRISPR-associated protein%2C Cas02710~IMG reference gene:2504785150~PFAM: CRISPR-associated protein (Cas_Cas02710)~TIGRFAM: CRISPR-associated protein%2C TIGR02710 family gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1734 Thena_1735 Thena_1735 Thena_1735 1788706 1790157 - CRISPR-associated protein%2C TM1812 family InterPro IPR011742~KEGG: cya:CYA_2548 CRISPR-associated TM1812 family protein~PFAM: CRISPR-associated protein%2C TM1812~SPTR: CRISPR-associated protein%2C TM1812 family%3B~TIGRFAM: CRISPR-associated protein%2C TM1812~IMG reference gene:2504785151~PFAM: CRISPR-associated protein (Cas_csx3)%3B CRISPR-associated protein (cas_TM1812)~TIGRFAM: CRISPR-associated protein%2C TM1812 family gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1735 Thena_1736 Thena_1736 Thena_1736 1790186 1791118 - CRISPR-associated protein Cas6 KEGG: tye:THEYE_A0068 CRISPR-associated protein Cas6~SPTR: CRISPR-associated protein Cas6%3B~IMG reference gene:2504785152~PFAM: Uncharacterized conserved protein (DUF2276) gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1736 Thena_1737 Thena_1737 Thena_1737 1791273 1792556 + hypothetical protein KEGG: bbe:BBR47_39300 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785153 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1737 Thena_1738 Thena_1738 Thena_1738 1792537 1793337 + hypothetical protein KEGG: gym:GYMC10_5299 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785154 gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1738 Thena_1739 Thena_1739 Thena_1739 1793342 1794079 - TraT complement resistance family protein InterPro IPR008874:IPR008816~KEGG: hya:HY04AAS1_0798 TraT complement resistance family protein~PFAM: Enterobacterial TraT complement resistance%3B Rickettsia 17kDa surface antigen~SPTR: TraT complement resistance family protein%3B~IMG reference gene:2504785155~PFAM: Enterobacterial TraT complement resistance protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1739 Thena_1740 Thena_1740 Thena_1740 1794214 1794438 - pseudogene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1740 Thena_1741 Thena_1741 Thena_1741 1794572 1795336 - MORN repeat-containing protein COGs: COG4642 conserved hypothetical protein~InterPro IPR003409~KEGG: tet:TTHERM_00584930 hypothetical protein~PFAM: MORN motif~SMART: MORN motif~SPTR: Morn motif-containing protein%3B~IMG reference gene:2504785157~PFAM: MORN repeat gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1741 Thena_1742 Thena_1742 Thena_1742 1795502 1796221 + iron (metal) dependent repressor%2C DtxR family COGs: COG1321 Mn-dependent transcriptional regulator protein~InterPro IPR001367:IPR007167~KEGG: adg:Adeg_0633 iron (metal) dependent repressor%2C DtxR family~PFAM: Iron dependent repressor%3B Ferrous iron transporter%2C FeoA subunit~SMART: Iron dependent repressor~SPTR: Iron (Metal) dependent repressor%2C DtxR family%3B~IMG reference gene:2504785158~PFAM: Iron dependent repressor%2C metal binding and dimerisation domain%3B Iron dependent repressor%2C N-terminal DNA binding domain gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1742 Thena_1743 Thena_1743 Thena_1743 1796274 1797650 - NAD(P)H-quinone oxidoreductase subunit 2 COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N)~HAMAP: NAD(P)H-quinone oxidoreductase subunit 2~InterPro IPR010096:IPR001750~KEGG: tye:THEYE_A0921 NADH-quinone oxidoreductase chain N~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-quinone oxidoreductase subunit N 1%3B~TIGRFAM: NADH-quinone oxidoreductase%2C chain N~IMG reference gene:2504785159~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1743 Thena_1744 Thena_1744 Thena_1744 1797647 1799152 - proton-translocating NADH-quinone oxidoreductase%2C chain M COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M)~InterPro IPR010227:IPR001750~KEGG: tye:THEYE_A0920 NADH-quinone oxidoreductase chain M~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-quinone oxidoreductase chain m%3B~TIGRFAM: NADH-quinone oxidoreductase%2C chain M~IMG reference gene:2504785160~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1744 Thena_1745 Thena_1745 Thena_1745 1799153 1800931 - NADH dehydrogenase (quinone) COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit~InterPro IPR001750~KEGG: dal:Dalk_4926 putative monovalent cation/H+ antiporter subunit D~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase (Quinone)%3B~IMG reference gene:2504785161~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1745 Thena_1746 Thena_1746 Thena_1746 1800921 1801166 - hypothetical protein KEGG: dat:HRM2_35340 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785162 gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1746 Thena_1747 Thena_1747 Thena_1747 1801190 1801342 - hypothetical protein IMG reference gene:2504785163 gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1747 Thena_1748 Thena_1748 Thena_1748 1801382 1802860 - NADH dehydrogenase (quinone) COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit~InterPro IPR001750~KEGG: tye:THEYE_A1118 NADH dehydrogenase I L subunit~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase i l subunit%3B~IMG reference gene:2504785164~PFAM: NADH-Ubiquinone/plastoquinone (complex I)%2C various chains%3B NADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1748 Thena_1749 Thena_1749 Thena_1749 1802864 1803166 - NAD(P)H-quinone oxidoreductase subunit 4L COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K)~HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L~InterPro IPR001133~KEGG: NADH dehydrogenase subunit K~PFAM: NADH:ubiquinone/quinone oxidoreductase%2C chain 4L~SPTR: NADH-ubiquinone oxidoreductase chain 4L%3B~IMG reference gene:2504785165~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1749 Thena_1750 Thena_1750 Thena_1750 1803167 1803682 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6 COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J)~InterPro IPR001457~KEGG: tye:THEYE_A1120 NADH-quinone oxidoreductase chain J~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase%2C chain 6~SPTR: NADH-quinone oxidoreductase chain j%3B~IMG reference gene:2504785166~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1750 Thena_1751 Thena_1751 Thena_1751 1803679 1804680 - NAD(P)H-quinone oxidoreductase subunit 1 COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H)~HAMAP: NAD(P)H-quinone oxidoreductase subunit 1~InterPro IPR001694~KEGG: tye:THEYE_A1121 NADH-quinone oxidoreductase chain H~PFAM: NADH:ubiquinone oxidoreductase%2C subunit 1~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-quinone oxidoreductase chain h%3B~IMG reference gene:2504785167~PFAM: NADH dehydrogenase gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1751 Thena_1752 Thena_1752 Thena_1752 1804683 1805219 - NAD(P)H-quinone oxidoreductase subunit J COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit~HAMAP: NAD(P)H-quinone oxidoreductase subunit J~InterPro IPR010218:IPR001268~KEGG: tye:THEYE_A1122 NADH-quinone oxidoreductase chain c 2~PFAM: NADH:ubiquinone oxidoreductase%2C 30kDa subunit~SPTR: NADH-quinone oxidoreductase subunit C 2%3B~TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C~IMG reference gene:2504785168~PFAM: Respiratory-chain NADH dehydrogenase%2C 30 Kd subunit~TIGRFAM: NADH (or F420H2) dehydrogenase%2C subunit C gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1752 Thena_1753 Thena_1753 Thena_1753 1805216 1805608 - NAD(P)H-quinone oxidoreductase subunit 3 COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A)~HAMAP: NAD(P)H-quinone oxidoreductase subunit 3~InterPro IPR000440~KEGG: NADH dehydrogenase subunit A~PFAM: NADH:ubiquinone/plastoquinone oxidoreductase%2C chain 3~SPTR: NADH-ubiquinone/plastoquinone oxidoreductase chain 3%3B~IMG reference gene:2504785169~PFAM: NADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1753 Thena_1754 Thena_1754 Thena_1754 1805605 1806183 - NAD(P)H-quinone oxidoreductase subunit I COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)~HAMAP: NADH-quinone oxidoreductase%2C chain I~InterPro IPR010226:IPR001450~KEGG: tye:THEYE_A0916 NADH-ubiquinone oxidoreductase 23 kda subunit~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-quinone oxidoreductase subunit I 1%3B~TIGRFAM: NADH-quinone oxidoreductase%2C chain I~IMG reference gene:2504785170~PFAM: 4Fe-4S binding domain~TIGRFAM: NADH-quinone oxidoreductase%2C chain I gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1754 Thena_1755 Thena_1755 Thena_1755 1806180 1807439 - NAD(P)H-quinone oxidoreductase subunit H COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7~HAMAP: NAD(P)H-quinone oxidoreductase subunit H~InterPro IPR010219:IPR001135~KEGG: NADH dehydrogenase subunit D~PFAM: NADH-quinone oxidoreductase%2C subunit D~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase I%2C D subunit%3B~TIGRFAM: NADH dehydrogenase I%2C D subunit~IMG reference gene:2504785171~PFAM: Respiratory-chain NADH dehydrogenase%2C 49 Kd subunit~TIGRFAM: NADH dehydrogenase I%2C D subunit gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1755 Thena_1756 Thena_1756 Thena_1756 1807421 1807957 - NAD(P)H-quinone oxidoreductase subunit K COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase~HAMAP: NAD(P)H-quinone oxidoreductase subunit K~InterPro IPR006138:IPR006137~KEGG: NADH dehydrogenase subunit B~PFAM: NADH:ubiquinone oxidoreductase-like%2C 20kDa subunit~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH-quinone oxidoreductase subunit B%3B~TIGRFAM: NADH:ubiquinone oxidoreductase%2C 20kDa subunit~IMG reference gene:2504785172~PFAM: NADH ubiquinone oxidoreductase%2C 20 Kd subunit~TIGRFAM: NADH-quinone oxidoreductase%2C B subunit gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1756 Thena_1757 Thena_1757 Thena_1757 1808059 1808565 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~InterPro IPR001450~KEGG: tye:THEYE_A1127 anaerobic dimethyl sulfoxide reductase chain B~PFAM: 4Fe-4S ferredoxin%2C iron-sulphur binding%2C subgroup~SPTR: Anaerobic dimethyl sulfoxide reductase chain B%3B~IMG reference gene:2504785173~PFAM: 4Fe-4S binding domain gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1757 Thena_1758 Thena_1758 Thena_1758 1808601 1810685 - Trimethylamine-N-oxide reductase (cytochrome c) COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterPro IPR006963:IPR006656:IPR006657~KEGG: dbr:Deba_2842 molybdopterin oxidoreductase~PFAM: Molybdopterin oxidoreductase%3B Molybdopterin oxidoreductase Fe4S4 region%3B Molydopterin dinucleotide-binding region~PRIAM: Trimethylamine-N-oxide reductase (cytochrome c)~SPTR: Molybdopterin oxidoreductase%3B~IMG reference gene:2504785174~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1758 Thena_1759 Thena_1759 Thena_1759 1810884 1811267 + NADPH-dependent 7-cyano-7-deazaguanine reductase COGs: COG0780 Enzyme related to GTP cyclohydrolase I~HAMAP: Nitrile oxidoreductase%2C NADPH-dependent%2C QueF~InterPro IPR016856:IPR020602~KEGG: tnp:Tnap_0139 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase~SPTR: NADPH-dependent 7-cyano-7-deazaguanine reductase%3B~TIGRFAM: Nitrile oxidoreductase%2C NADPH-dependent%2C QueF~IMG reference gene:2504785175~PFAM: GTP cyclohydrolase I~TIGRFAM: 7-cyano-7-deazaguanine reductase gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1759 Thena_1760 Thena_1760 Thena_1760 1811404 1813563 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089~KEGG: dma:DMR_01390 methyl-accepting chemotaxis protein~PFAM: Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis protein%3B~IMG reference gene:2504785176~PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1760 Thena_1761 Thena_1761 Thena_1761 1813711 1814271 + nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: dae:Dtox_0893 nitroreductase~PFAM: Nitroreductase-like~SPTR: Nitroreductase%3B~IMG reference gene:2504785177~PFAM: Nitroreductase family gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1761 Thena_1762 Thena_1762 Thena_1762 1814288 1815463 + flavodoxin/nitric oxide synthase COGs: COG0426 flavoprotein~InterPro IPR008254~KEGG: mba:Mbar_A3353 flavoprotein A~PFAM: Flavodoxin/nitric oxide synthase~SPTR: Flavoprotein A%3B~IMG reference gene:2504785178~PFAM: Flavodoxin%3B Metallo-beta-lactamase superfamily gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1762 Thena_1763 Thena_1763 Thena_1763 1815466 1817088 + 2-isopropylmalate synthase/homocitrate synthase family protein COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR005675:IPR000891:IPR013709~KEGG: dth:DICTH_1068 putative alpha-isopropylmalate/homocitrate synthase family transferase~PFAM: Pyruvate carboxyltransferase%3B 2-isopropylmalate synthase LeuA%2C allosteric (dimerisation) domain~PRIAM: (R)-citramalate synthase~SPTR: 2-isopropylmalate synthase/homocitrate synthase family protein%3B~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related~IMG reference gene:2504785179~PFAM: HMGL-like%3B LeuA allosteric (dimerisation) domain~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1763 Thena_1764 Thena_1764 Thena_1764 1817085 1817630 + Abortive infection protein InterPro IPR003675~KEGG: bsu:BSU23010 putative membrane protease~PFAM: Abortive infection protein~SPTR: Putative uncharacterized protein ypbD%3B~IMG reference gene:2504785180~PFAM: CAAX amino terminal protease family gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1764 Thena_1765 Thena_1765 Thena_1765 1817826 1818881 - hypothetical protein KEGG: gvi:glr4348 hypothetical protein~SPTR: Glr4348 protein%3B~IMG reference gene:2504785181 gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1765 Thena_1766 Thena_1766 Thena_1766 1818966 1819391 - hypothetical protein IMG reference gene:2504785182 gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1766 Thena_1767 Thena_1767 Thena_1767 1819620 1820168 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG1225 Peroxiredoxin~InterPro IPR000866~KEGG: aar:Acear_0009 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen~PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B~IMG reference gene:2504785183~PFAM: AhpC/TSA family gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1767 Thena_1768 Thena_1768 Thena_1768 1820152 1821006 + protease htpX COGs: COG0501 Zn-dependent protease with chaperone function~HAMAP: protease htpX~InterPro IPR001915~KEGG: chy:CHY_0108 M48 family peptidase~PFAM: Peptidase M48%2C Ste24p~SPTR: Protease HtpX homolog%3B~IMG reference gene:2504785184~PFAM: Peptidase family M48 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1768 Thena_1769 Thena_1769 Thena_1769 1821053 1821619 + GTP cyclohydrolase 1 COGs: COG0302 GTP cyclohydrolase I~HAMAP: GTP cyclohydrolase I~InterPro IPR001474:IPR020602~KEGG: ttm:Tthe_0381 GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase~PRIAM: GTP cyclohydrolase I~SPTR: GTP cyclohydrolase 1%3B~TIGRFAM: GTP cyclohydrolase I~IMG reference gene:2504785185~PFAM: GTP cyclohydrolase I~TIGRFAM: GTP cyclohydrolase I gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1769 Thena_1770 Thena_1770 Thena_1770 1821616 1822455 + dihydropteroate synthase COGs: COG0294 Dihydropteroate synthase~InterPro IPR006390:IPR000489~KEGG: kol:Kole_0275 dihydropteroate synthase~PFAM: Dihydropteroate synthase%2C DHPS~PRIAM: Dihydropteroate synthase~SPTR: Dihydropteroate synthase%3B~TIGRFAM: Dihydropteroate synthase~IMG reference gene:2504785186~PFAM: Pterin binding enzyme~TIGRFAM: dihydropteroate synthase gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1770 Thena_1771 Thena_1771 Thena_1771 1822455 1822961 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase~InterPro IPR000550~KEGG: bld:BLi00095 hypothetical protein~PFAM: 7%2C8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C HPPK~PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase~SPTR: 7%2C8-dihydro-6-hydroxymethylpterin pyrophosphokinase (2-amino-4-hydroxy-6-hydroxymethyldihydropteridine)%3B~TIGRFAM: 7%2C8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase%2C HPPK~IMG reference gene:2504785187~PFAM: 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)~TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1771 Thena_1772 Thena_1772 Thena_1772 1822936 1823436 + protein of unknown function DUF151 COGs: COG1259 conserved hypothetical protein~InterPro IPR003729~KEGG: aae:aq_283 hypothetical protein~PFAM: Protein of unknown function DUF151~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785188~PFAM: Uncharacterised ACR%2C COG1259 gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1772 Thena_1773 Thena_1773 Thena_1773 1823427 1826963 + protein of unknown function DUF490 COGs: COG2911 conserved hypothetical protein~InterPro IPR007452~KEGG: sul:SYO3AOP1_1462 hypothetical protein~PFAM: Protein of unknown function DUF490~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785189~PFAM: Family of unknown function (DUF490) gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1773 Thena_1774 Thena_1774 Thena_1774 1826991 1828862 - amino acid permease-associated region InterPro IPR004841~KEGG: hya:HY04AAS1_0920 amino acid transporter-like~PFAM: Amino acid permease-associated region~SPTR: Amino acid transporter-like%3B~IMG reference gene:2504785190 gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1774 Thena_1775 Thena_1775 Thena_1775 1828975 1830660 - ABC-1 domain-containing protein COGs: COG0661 unusual protein kinase~InterPro IPR004147~KEGG: gur:Gura_1388 hypothetical protein~PFAM: ABC-1~SPTR: 2-octaprenylphenol hydroxylase%3B~IMG reference gene:2504785191~PFAM: ABC1 family gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1775 Thena_1776 Thena_1776 Thena_1776 1830677 1830967 - hypothetical protein KEGG: slp:Slip_1400 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785192 gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1776 Thena_1777 Thena_1777 Thena_1777 1831477 1831869 + thioesterase superfamily protein COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism~InterPro IPR006683~KEGG: aac:Aaci_2418 thioesterase superfamily protein~PFAM: Thioesterase superfamily~SPTR: Thioesterase superfamily protein%3B~IMG reference gene:2504785194~PFAM: Thioesterase superfamily~TIGRFAM: uncharacterized domain 1 gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1777 Thena_1778 Thena_1778 Thena_1778 1831866 1832312 + SsrA-binding protein COGs: COG0691 tmRNA-binding protein~HAMAP: SsrA-binding protein~InterPro IPR000037~KEGG: dau:Daud_0256 SsrA-binding protein~PFAM: SsrA-binding protein~SPTR: SsrA-binding protein%3B~TIGRFAM: SsrA-binding protein~IMG reference gene:2504785195~PFAM: SmpB protein~TIGRFAM: SsrA-binding protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1778 Thena_1779 Thena_1779 Thena_1779 1832332 1833201 + signal peptide peptidase SppA%2C 36K type COGs: COG0616 Periplasmic serine protease (ClpP class)~InterPro IPR004635:IPR002142~KEGG: hth:HTH_0236 signal peptide peptidase~PFAM: Peptidase S49~SPTR: Signal peptide peptidase%3B~TIGRFAM: Peptidase S49%2C SppA~IMG reference gene:2504785196~PFAM: Peptidase family S49~TIGRFAM: signal peptide peptidase SppA%2C 36K type gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1779 Thena_1780 Thena_1780 Thena_1780 1833225 1833575 + Cupin 2 conserved barrel domain protein COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain~InterPro IPR013096~KEGG: tba:TERMP_01771 putative carbohydrate binding protein~PFAM: Cupin 2%2C conserved barrel~SPTR: Cupin region%3B~IMG reference gene:2504785197~PFAM: Cupin domain gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1780 Thena_1781 Thena_1781 Thena_1781 1833586 1833966 + Cupin 2 conserved barrel domain protein InterPro IPR013096~PFAM: Cupin 2%2C conserved barrel~IMG reference gene:2504785198~PFAM: Cupin domain gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1781 Thena_1782 Thena_1782 Thena_1782 1833977 1834570 + riboflavin synthase%2C alpha subunit COGs: COG0307 Riboflavin synthase alpha chain~InterPro IPR001783~KEGG: bpo:BP951000_1423 riboflavin synthase subunit alpha~PFAM: Lumazine-binding protein~PRIAM: Riboflavin synthase~SPTR: Riboflavin synthase subunit alpha%3B~TIGRFAM: Lumazine-binding protein~IMG reference gene:2504785199~PFAM: Lumazine binding domain~TIGRFAM: riboflavin synthase%2C alpha subunit gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1782 Thena_1783 Thena_1783 Thena_1783 1834571 1835236 + HhH-GPD family protein COGs: COG2231 Uncharacterized protein related to Endonuclease III~InterPro IPR003265~KEGG: mfe:Mefer_1171 HhH-GPD family protein~PFAM: HhH-GPD domain~SMART: HhH-GPD domain~SPTR: HhH-GPD family protein%3B~IMG reference gene:2504785200~PFAM: HhH-GPD superfamily base excision DNA repair protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1783 Thena_1784 Thena_1784 Thena_1784 1835211 1836842 - drug resistance transporter%2C EmrB/QacA subfamily COGs: COG2814 Arabinose efflux permease~InterPro IPR004638:IPR011701~KEGG: gur:Gura_2706 EmrB/QacA family drug resistance transporter~PFAM: Major facilitator superfamily MFS-1~SPTR: Drug resistance transporter%2C EmrB/QacA subfamily%3B~TIGRFAM: Drug resistance transporter EmrB/QacA subfamily~IMG reference gene:2504785201~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily%3B Multidrug resistance protein gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1784 Thena_1785 Thena_1785 Thena_1785 1836973 1838058 - secretion protein HlyD family protein COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143~KEGG: tye:THEYE_A0118 multidrug resistance protein A~PFAM: Secretion protein HlyD~SPTR: Multidrug resistance protein A%3B~IMG reference gene:2504785202~PFAM: HlyD family secretion protein~TIGRFAM: efflux pump membrane protein (multidrug resistance protein A) gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1785 Thena_1786 Thena_1786 Thena_1786 1838321 1838737 + UspA domain-containing protein COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein~InterPro IPR006016~KEGG: iho:Igni_0456 UspA domain-containing protein~PFAM: UspA~SPTR: UspA domain protein%3B~IMG reference gene:2504785203~PFAM: Universal stress protein family gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1786 Thena_1787 Thena_1787 Thena_1787 1838797 1841361 - alanyl-tRNA synthetase COGs: COG0013 Alanyl-tRNA synthetase~InterPro IPR002318:IPR018164:IPR012947:IPR003156~KEGG: alanyl-tRNA synthetase~PFAM: Alanyl-tRNA synthetase%2C class IIc%2C N-terminal%3B Threonyl/alanyl tRNA synthetase%2C SAD%3B Phosphoesterase%2C DHHA1~SPTR: Alanyl-tRNA synthetase%3B~TIGRFAM: Alanyl-tRNA synthetase%2C class IIc~IMG reference gene:2504785204~PFAM: DHHA1 domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetases class II (A)~TIGRFAM: alanine--tRNA ligase gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1787 Thena_1788 Thena_1788 Thena_1788 1841439 1842077 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: afu:AF0131 NAD(P)H-flavin oxidoreductase%2C putative~PFAM: Nitroreductase-like~SPTR: Nitroreductase%3B~IMG reference gene:2504785205~PFAM: Nitroreductase family gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1788 Thena_1789 Thena_1789 Thena_1789 1842148 1842954 - band 7 protein COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs~InterPro IPR001107~KEGG: sti:Sthe_1856 band 7 protein~PFAM: Band 7 protein~SMART: Band 7 protein~SPTR: Band 7 protein%3B~IMG reference gene:2504785206~PFAM: SPFH domain / Band 7 family gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1789 Thena_1790 Thena_1790 Thena_1790 1843004 1844305 - protein of unknown function DUF107 COGs: COG1030 Membrane-bound serine protease (ClpP class)~InterPro IPR002810~KEGG: tye:THEYE_A0592 membrane-bound serine protease~PFAM: Nodulation efficiency%2C NfeD~SPTR: Membrane-bound serine protease%3B~IMG reference gene:2504785207~PFAM: NfeD-like gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1790 Thena_1791 Thena_1791 Thena_1791 1844308 1845501 - hypothetical protein COGs: COG4372 Uncharacterized protein with the myosin-like domain~KEGG: dth:DICTH_0671 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785208~PFAM: Protein of unknown function (DUF3084) gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1791 Thena_1792 Thena_1792 Thena_1792 1845489 1846586 - permease YjgP/YjgQ family protein COGs: COG0795 permease~InterPro IPR005495~KEGG: afn:Acfer_1675 permease YjgP/YjgQ family protein~PFAM: Permease YjgP/YjgQ%2C predicted~SPTR: Permease%2C YjgP/YjgQ family%3B~IMG reference gene:2504785209~PFAM: Predicted permease YjgP/YjgQ family gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1792 Thena_1793 Thena_1793 Thena_1793 1846583 1847146 - OstA family protein InterPro IPR005653~PFAM: OstA-like protein~IMG reference gene:2504785210 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1793 Thena_1794 Thena_1794 Thena_1794 1847373 1847549 + hypothetical protein IMG reference gene:2504785211 gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1794 Thena_1795 Thena_1795 Thena_1795 1847536 1847763 + FeoA family protein COGs: COG1918 Fe2+ transport system protein A~InterPro IPR007167~KEGG: cac:CA_C0447 FeoA protein%2C involved in Fe2+ transport~PFAM: Ferrous iron transporter%2C FeoA subunit~SPTR: FeoA family protein%3B~IMG reference gene:2504785212~PFAM: FeoA domain gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1795 Thena_1796 Thena_1796 Thena_1796 1847730 1849892 + ferrous iron transport protein B COGs: COG0370 Fe2+ transport system protein B~InterProIPR005225:IPR003373:IPR002917:IPR011619:IPR 011642:IPR011640~KEGG: ipo:Ilyop_0309 ferrous iron transport protein B~PFAM: GTP-binding protein%2C HSR1-related%3B Ferrous iron transport protein B%2C N-terminal%3B Nucleoside recognition%3B Ferrous iron transport protein B%2C C-terminal~SPTR: Ferrous iron transporter B%3B~TIGRFAM: Ferrous iron transport protein B%3B Small GTP-binding protein~IMG reference gene:2504785213~PFAM: Ferrous iron transport protein B%3B Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB%3B small GTP-binding protein domain gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1796 Thena_1797 Thena_1797 Thena_1797 1849878 1850504 - phosphoribosyltransferase COGs: COG1040 amidophosphoribosyltransferase~InterPro IPR000836~KEGG: apr:Apre_0759 hypothetical protein~PFAM: Phosphoribosyltransferase~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785214~PFAM: Phosphoribosyl transferase domain gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1797 Thena_1798 Thena_1798 Thena_1798 1850527 1851720 - S-adenosylmethionine synthase COGs: COG0192 S-adenosylmethionine synthetase~HAMAP: S-adenosylmethionine synthase~InterPro IPR002133~KEGG: tit:Thit_0464 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase~PRIAM: Methionine adenosyltransferase~SPTR: S-adenosylmethionine synthase%3B~TIGRFAM: S-adenosylmethionine synthetase~IMG reference gene:2504785215~PFAM: S-adenosylmethionine synthetase%2C C-terminal domain%3B S-adenosylmethionine synthetase%2C central domain%3B S-adenosylmethionine synthetase%2C N-terminal domain~TIGRFAM: S-adenosylmethionine synthetase gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1798 Thena_1799 Thena_1799 Thena_1799 1851836 1853086 - hypothetical protein IMG reference gene:2504785216 gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1799 Thena_1800 Thena_1800 Thena_1800 1853257 1854354 + methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089:IPR018771~KEGG: amt:Amet_3759 methyl-accepting chemotaxis sensory transducer~PFAM: Transcriptional regulator%2C histidine kinase sensor%2C N-terminal%3B Chemotaxis methyl-accepting receptor%2C signalling~SMART: Chemotaxis methyl-accepting receptor%2C signalling~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~IMG reference gene:2504785217~PFAM: Predicted histidine kinase sensor domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1800 Thena_1801 Thena_1801 Thena_1801 1854355 1854957 - hypothetical protein IMG reference gene:2504785218 gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1801 Thena_1802 Thena_1802 Thena_1802 1854978 1855328 - hypothetical protein COGs: COG1416 conserved hypothetical protein~InterPro IPR014865~KEGG: chd:Calhy_1533 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785219~PFAM: DsrE/DsrF-like family gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1802 Thena_1803 Thena_1803 Thena_1803 1855325 1856305 - molybdopterin binding domain protein COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR001453~KEGG: mta:Moth_0932 molybdopterin binding domain-containing protein~PFAM: Molybdopterin binding~SPTR: Molybdopterin binding domain%3B~IMG reference gene:2504785220~PFAM: Probable molybdopterin binding domain gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1803 Thena_1804 Thena_1804 Thena_1804 1856308 1857471 - MoeA domain protein domain I and II COGs: COG0303 Molybdopterin biosynthesis enzyme~InterPro IPR005110:IPR001453:IPR005111~KEGG: amt:Amet_0996 molybdenum cofactor synthesis domain-containing protein~PFAM: MoeA%2C N-terminal region%2C domain I/II%3B Molybdopterin binding%3B MoeA%2C C-terminal%2C domain IV~SPTR: Molybdenum cofactor synthesis domain%3B~IMG reference gene:2504785221~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II) gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1804 Thena_1805 Thena_1805 Thena_1805 1857502 1858068 - Methyltransferase type 11 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: cst:CLOST_0716 hypothetical protein~PFAM: Methyltransferase type 11~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785222~PFAM: Methyltransferase domain gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1805 Thena_1806 Thena_1806 Thena_1806 1858276 1859085 + Hydroxyethylthiazole kinase COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family~HAMAP: Hydroxyethylthiazole kinase~InterPro IPR000417~KEGG: ctc:CTC01752 hydroxyethylthiazole kinase~PFAM: Hydroxyethylthiazole kinase~PRIAM: Hydroxyethylthiazole kinase~SPTR: Hydroxyethylthiazole kinase%3B~TIGRFAM: hydroxyethylthiazole kinase~IMG reference gene:2504785223~PFAM: Hydroxyethylthiazole kinase family~TIGRFAM: hydroxyethylthiazole kinase gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1806 Thena_1807 Thena_1807 Thena_1807 1859082 1859351 + Acylphosphatase COGs: COG1254 Acylphosphatase~HAMAP: Acylphosphatase~InterPro IPR001792~KEGG: acylphosphatase~PFAM: Acylphosphatase-like~SPTR: Acylphosphatase%3B~IMG reference gene:2504785224~PFAM: Acylphosphatase gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1807 Thena_1808 Thena_1808 Thena_1808 1859364 1860524 - CheC%2C inhibitor of MCP methylation / FliN fusion protein COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation~InterPro IPR012826:IPR007597:IPR001543~KEGG: dhd:Dhaf_4142 CheC%2C inhibitor of MCP methylation / FliN fusion protein~PFAM: Surface presentation of antigen (SpoA)%3B CheC-like protein~SPTR: CheC%2C inhibitor of MCP methylation / FliN fusion protein%3B~TIGRFAM: Flagellar motor switch FliN~IMG reference gene:2504785225~PFAM: Surface presentation of antigens (SPOA)%3B CheC-like family~TIGRFAM: flagellar motor switch protein FliN gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1808 Thena_1809 Thena_1809 Thena_1809 1860529 1861500 - flagellar motor switch protein FliM COGs: COG1868 Flagellar motor switch protein~InterPro IPR001689:IPR001543~KEGG: sta:STHERM_c09230 hypothetical protein~PFAM: Flagellar motor switch protein FliM%3B Surface presentation of antigen (SpoA)~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar motor switch protein FliM~IMG reference gene:2504785226~PFAM: Surface presentation of antigens (SPOA)%3B Flagellar motor switch protein FliM~TIGRFAM: flagellar motor switch protein FliM gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1809 Thena_1810 Thena_1810 Thena_1810 1861500 1862294 - MotA/TolQ/ExbB proton channel COGs: COG1291 Flagellar motor component~InterPro IPR002898~KEGG: sti:Sthe_0579 MotA/TolQ/ExbB proton channel~PFAM: MotA/TolQ/ExbB proton channel~SPTR: MotA/TolQ/ExbB proton channel%3B~IMG reference gene:2504785227~PFAM: MotA/TolQ/ExbB proton channel family gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1810 Thena_1811 Thena_1811 Thena_1811 1862298 1862525 - flagellar FlbD family protein COGs: COG1582 Uncharacterized protein possibly involved in motility~InterPro IPR009384~KEGG: tte:TTE1432 hypothetical protein~PFAM: Flagellar~SPTR: Uncharacterized protein%2C possibly involved in motility%3B~IMG reference gene:2504785228~PFAM: Flagellar protein (FlbD) gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1811 Thena_1812 Thena_1812 Thena_1812 1862522 1863289 - flagellar hook-basal body protein COGs: COG4786 Flagellar basal body rod protein~InterPro IPR020013:IPR001444:IPR010930~KEGG: bmq:BMQ_4185 flagellar hook protein FlgE~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal~SPTR: Flagellar hook protein FlgE%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~IMG reference gene:2504785229~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgF%3B fagellar hook-basal body proteins gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1812 Thena_1813 Thena_1813 Thena_1813 1863319 1864998 - flagellar hook-basal body protein COGs: COG1749 Flagellar hook protein FlgE~InterPro IPR020013:IPR001444:IPR011491:IPR010930~KEGG: hor:Hore_16800 flagellar hook protein FlgE~PFAM: Protein of unknown function DUF1078%2C C-terminal%3B Flagellar basal body rod protein%2C N-terminal%3B Flagellar basal body FlaE~SPTR: Flagellar hook protein FlgE%2C epsilon proteobacterial%3B~TIGRFAM: Fagellar hook-basal body protein%2C FlgE/F/G~IMG reference gene:2504785230~PFAM: Flagella basal body rod protein%3B Domain of unknown function (DUF1078)%3B Flagellar basal body protein FlaE~TIGRFAM: fagellar hook-basal body proteins gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1813 Thena_1814 Thena_1814 Thena_1814 1865051 1865404 - flagellar operon protein InterPro IPR013367~KEGG: toc:Toce_1103 flagellar operon protein~SPTR: Flagellar operon protein%3B~TIGRFAM: Flagellar%2C putative~IMG reference gene:2504785231~PFAM: Protein of unknown function (DUF3766)~TIGRFAM: flagellar operon protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1814 Thena_1815 Thena_1815 Thena_1815 1865401 1865820 - flagellar hook capping protein InterPro IPR005648~KEGG: bja:bll6853 flagellar basal body rod modification protein~PFAM: Flagellar hook capping protein~SPTR: Hook formation protein%3B~IMG reference gene:2504785232~PFAM: Flagellar hook capping protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1815 Thena_1816 Thena_1816 Thena_1816 1865838 1867580 - hypothetical protein KEGG: ljo:LJ1711 hypothetical protein~SPTR: SrpA%3B~IMG reference gene:2504785233~PFAM: Flagellar hook-length control protein FliK gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1816 Thena_1817 Thena_1817 Thena_1817 1867686 1868276 - Phosphoheptose isomerase COGs: COG0279 Phosphoheptose isomerase~HAMAP: Phosphoheptose isomerase~InterPro IPR020620:IPR001347~KEGG: cjj:CJJ81176_1423 phosphoheptose isomerase~PFAM: Sugar isomerase (SIS)~SPTR: Phosphoheptose isomerase%3B~IMG reference gene:2504785234~PFAM: SIS domain~TIGRFAM: phosphoheptose isomerase gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1817 Thena_1818 Thena_1818 Thena_1818 1868273 1870660 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: vap:Vapar_0763 glycosyl transferase group 1~PFAM: Glycosyl transferase%2C group 1~SPTR: Glycosyl transferase group 1%3B~IMG reference gene:2504785235~PFAM: Glycosyl transferases group 1 gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1818 Thena_1819 Thena_1819 Thena_1819 1870662 1870829 - hypothetical protein IMG reference gene:2504785236 gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1819 Thena_1820 Thena_1820 Thena_1820 1870842 1870937 - hypothetical protein IMG reference gene:2504785237 gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1820 Thena_1821 Thena_1821 Thena_1821 1870930 1871067 - hypothetical protein IMG reference gene:2504785238 gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1821 Thena_1822 Thena_1822 Thena_1822 1871367 1872236 + Tetratricopeptide TPR_1 repeat-containing protein InterPro IPR019734:IPR001440~KEGG: mac:MA3293 hypothetical protein~PFAM: Tetratricopeptide TPR-1~SMART: Tetratricopeptide repeat~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785239 gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1822 Thena_1823 Thena_1823 Thena_1823 1872376 1873050 + hypothetical protein KEGG: mth:MTH1437 hypothetical protein~SPTR: Conserved protein%3B~IMG reference gene:2504785240 gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1823 Thena_1824 Thena_1824 Thena_1824 1873241 1874557 - Na+/H+ antiporter NhaC COGs: COG1757 Na+/H+ antiporter~InterPro IPR018461~KEGG: bse:Bsel_1008 Na+/H+ antiporter NhaC-like protein~PFAM: Na+/H+ antiporter NhaC-like~SPTR: Na+/H+ antiporter%3B~IMG reference gene:2504785241~PFAM: Na+/H+ antiporter family gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1824 Thena_1825 Thena_1825 Thena_1825 1874606 1875928 + Adenosylmethionine--8-amino-7-oxononanoate transaminase COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase~InterPro IPR005814~KEGG: ddf:DEFDS_1299 adenosylmethionine--8-amino-7-oxononanoate transaminase~PFAM: Aminotransferase class-III~PRIAM: Adenosylmethionine--8-amino-7-oxononanoate transaminase~SPTR: Adenosylmethionine--8-amino-7-oxononanoate transaminase%3B~IMG reference gene:2504785242~PFAM: Aminotransferase class-III~TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1825 Thena_1826 Thena_1826 Thena_1826 1875925 1876491 + dethiobiotin synthase COGs: COG0132 Dethiobiotin synthetase~InterPro IPR004472~KEGG: dap:Dacet_1108 dethiobiotin synthase~PRIAM: Dethiobiotin synthase~SPTR: Dethiobiotin synthetase%3B~TIGRFAM: Dethiobiotin synthase~IMG reference gene:2504785243~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: dethiobiotin synthase gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1826 Thena_1827 Thena_1827 Thena_1827 1876503 1877126 + putative antibiotic resistance protein COGs: COG3467 flavin-nucleotide-binding protein~KEGG: abu:Abu_0989 putative antibiotic resistance protein~SPTR: Putative antibiotic resistance protein%3B~IMG reference gene:2504785244~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1827 Thena_1828 Thena_1828 Thena_1828 1877117 1877884 - Methyltransferase type 12 InterPro IPR013217~KEGG: ddf:DEFDS_1303 biotin biosynthesis protein BioC~PFAM: Methyltransferase type 12~SPTR: Biotin biosynthesis protein BioC%3B~IMG reference gene:2504785245~PFAM: Methyltransferase domain gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1828 Thena_1829 Thena_1829 Thena_1829 1877881 1877982 - hypothetical protein IMG reference gene:2504785246 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1829 Thena_1830 Thena_1830 Thena_1830 1878085 1879452 - Integrase catalytic region InterPro IPR001584~KEGG: dau:Daud_1501 integrase catalytic subunit~PFAM: Integrase%2C catalytic core~SPTR: Integrase%2C catalytic region%3B~IMG reference gene:2504785247~PFAM: Integrase core domain gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1830 Thena_1831 Thena_1831 Thena_1831 1879518 1879958 - hypothetical protein KEGG: ddf:DEFDS_1302 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785248 gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1831 Thena_1832 Thena_1832 Thena_1832 1879955 1881106 - 8-amino-7-oxononanoate synthase COGs: COG0156 7-keto-8-aminopelargonate synthetase~InterPro IPR004839~KEGG: ddf:DEFDS_1301 8-amino-7-oxononanoate synthase~PFAM: Aminotransferase%2C class I/II~PRIAM: 8-amino-7-oxononanoate synthase~SPTR: 8-amino-7-oxononanoate synthase%3B~IMG reference gene:2504785249~PFAM: Aminotransferase class I and II~TIGRFAM: 8-amino-7-oxononanoate synthase gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1832 Thena_1833 Thena_1833 Thena_1833 1881110 1881568 - Nucleoside diphosphate kinase COGs: COG0105 Nucleoside diphosphate kinase~HAMAP: Nucleoside diphosphate kinase~InterPro IPR001564~KEGG: fpl:Ferp_0618 nucleoside-diphosphate kinase~PFAM: Nucleoside diphosphate kinase%2C core~PRIAM: Nucleoside-diphosphate kinase~SMART: Nucleoside diphosphate kinase%2C core~SPTR: Nucleoside diphosphate kinase%3B~IMG reference gene:2504785250~PFAM: Nucleoside diphosphate kinase gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1833 Thena_1834 Thena_1834 Thena_1834 1881613 1882512 - parB-like partition protein COGs: COG1475 transcriptional regulator protein~InterPro IPR004437:IPR003115~KEGG: mcl:MCCL_1950 chromosome partitioning protein ParB homolog~PFAM: ParB-like nuclease~SMART: ParB-like nuclease~SPTR: Chromosome partitioning protein ParB homolog%3B~TIGRFAM: ParB-like partition protein~IMG reference gene:2504785251~PFAM: ParB-like nuclease domain%3B KorB domain~TIGRFAM: ParB-like partition proteins gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1834 Thena_1835 Thena_1835 Thena_1835 1882505 1883257 - Cobyrinic acid ac-diamide synthase COGs: COG1192 ATPase involved in chromosome partitioning~InterPro IPR002586~KEGG: cth:Cthe_2377 chromosome segregation ATPase~PFAM: Cobyrinic acid a%2Cc-diamide synthase~SPTR: Chromosome segregation ATPase%3B~IMG reference gene:2504785252~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1835 Thena_1836 Thena_1836 Thena_1836 1883254 1884204 - hypothetical protein KEGG: chy:CHY_1566 hypothetical protein~SPTR: Putative uncharacterized protein%3B~IMG reference gene:2504785253~PFAM: NIF3 (NGG1p interacting factor 3) gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1836 Thena_1837 Thena_1837 Thena_1837 1884262 1885086 - UspA domain-containing protein InterPro IPR006016~KEGG: mma:MM_0741 universal stress protein~PFAM: UspA~SPTR: Universal stress protein%3B~IMG reference gene:2504785254~PFAM: Universal stress protein family gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1837 Thena_1838 Thena_1838 Thena_1838 1885285 1886730 + Anthranilate synthase COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I~InterPro IPR006805:IPR015890~KEGG: sul:SYO3AOP1_1246 anthranilate synthase component I~PFAM: Chorismate binding%2C C-terminal%3B Anthranilate synthase component I%2C N-terminal~PRIAM: Anthranilate synthase~SPTR: Anthranilate synthase component I%3B~IMG reference gene:2504785255~PFAM: Anthranilate synthase component I%2C N terminal region%3B chorismate binding enzyme~TIGRFAM: anthranilate synthase component I%2C non-proteobacterial lineages gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1838 Thena_1839 Thena_1839 Thena_1839 1886727 1887317 + glutamine amidotransferase of anthranilate synthase COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II~InterPro IPR006221:IPR000991~KEGG: aae:aq_549 anthranilate synthase component II~PFAM: Glutamine amidotransferase class-I%2C C-terminal~PRIAM: Anthranilate synthase~SPTR: Anthranilate synthase component II%3B~TIGRFAM: Glutamine amidotransferase of anthranilate synthase~IMG reference gene:2504785256~PFAM: Glutamine amidotransferase class-I~TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1839 Thena_1840 Thena_1840 Thena_1840 1887357 1888370 + Anthranilate phosphoribosyltransferase COGs: COG0547 Anthranilate phosphoribosyltransferase~HAMAP: Anthranilate phosphoribosyl transferase~InterPro IPR005940:IPR017459:IPR000312~KEGG: pth:PTH_1626 anthranilate phosphoribosyltransferase~PFAM: Glycosyl transferase%2C family 3%3B Glycosyl transferase%2C family 3%2C N-terminal~PRIAM: Anthranilate phosphoribosyltransferase~SPTR: Anthranilate phosphoribosyltransferase%3B~TIGRFAM: Anthranilate phosphoribosyl transferase~IMG reference gene:2504785257~PFAM: Glycosyl transferase family%2C a/b domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: anthranilate phosphoribosyltransferase gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1840 Thena_1841 Thena_1841 Thena_1841 1888367 1889161 + Indole-3-glycerol-phosphate synthase COGs: COG0134 Indole-3-glycerol phosphate synthase~InterPro IPR013798~KEGG: ttm:Tthe_1228 indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase~PRIAM: Indole-3-glycerol-phosphate synthase~SPTR: Indole-3-glycerol phosphate synthase%3B~IMG reference gene:2504785258~PFAM: Indole-3-glycerol phosphate synthase gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1841 Thena_1842 Thena_1842 Thena_1842 1889151 1889774 + Phosphoribosylanthranilate isomerase COGs: COG0135 Phosphoribosylanthranilate isomerase~InterPro IPR001240~KEGG: tmt:Tmath_1419 phosphoribosylanthranilate isomerase~PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)~PRIAM: Phosphoribosylanthranilate isomerase~SPTR: N-(5'-phosphoribosyl)anthranilate isomerase%3B~IMG reference gene:2504785259~PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1842 Thena_1843 Thena_1843 Thena_1843 1889767 1890960 + Tryptophan synthase beta chain COGs: COG0133 Tryptophan synthase beta chain~HAMAP: Tryptophan synthase beta chain~InterPro IPR006654:IPR001926~KEGG: tro:trd_0107 tryptophan synthase subunit beta~PFAM: Pyridoxal phosphate-dependent enzyme%2C beta subunit~PRIAM: Tryptophan synthase~SPTR: Tryptophan synthase beta chain 1%3B~TIGRFAM: Tryptophan synthase%2C beta chain~IMG reference gene:2504785260~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: tryptophan synthase%2C beta subunit gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1843 Thena_1844 Thena_1844 Thena_1844 1890947 1891705 + Tryptophan synthase alpha chain COGs: COG0159 Tryptophan synthase alpha chain~HAMAP: Tryptophan synthase%2C alpha chain~InterPro IPR002028~KEGG: pmo:Pmob_1207 tryptophan synthase%2C alpha subunit~PFAM: Tryptophan synthase%2C alpha chain~PRIAM: Tryptophan synthase~SPTR: Tryptophan synthase alpha chain%3B~TIGRFAM: Tryptophan synthase%2C alpha chain~IMG reference gene:2504785261~PFAM: Tryptophan synthase alpha chain~TIGRFAM: tryptophan synthase%2C alpha subunit gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1844 Thena_1845 Thena_1845 Thena_1845 1891900 1893738 + Cl- channel voltage-gated family protein COGs: COG0038 Chloride channel protein EriC~InterPro IPR000644:IPR001807~KEGG: hth:HTH_1798 putative chloride channel~PFAM: Chloride channel%2C voltage gated%3B Cystathionine beta-synthase%2C core~SMART: Cystathionine beta-synthase%2C core~SPTR: tRNA (Uracil-5-)-methyltransferase Gid%3B~IMG reference gene:2504785262~PFAM: CBS domain%3B Voltage gated chloride channel gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1845 Thena_1846 Thena_1846 Thena_1846 1893748 1894404 - Molybdate-transporting ATPase COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterPro IPR003593:IPR003439~KEGG: gwc:GWCH70_1739 ABC transporter related~PFAM: ABC transporter-like~PRIAM: Molybdate-transporting ATPase~SMART: ATPase%2C AAA+ type%2C core~SPTR: ABC transporter related%3B~IMG reference gene:2504785263~PFAM: ABC transporter gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1846 Thena_1847 Thena_1847 Thena_1847 1894404 1895084 - molybdate ABC transporter%2C inner membrane subunit COGs: COG4149 ABC-type molybdate transport system permease component~InterPro IPR011867:IPR000515~KEGG: bbe:BBR47_22870 molybdenum ABC transporter permease protein~PFAM: Binding-protein-dependent transport systems inner membrane component~SPTR: Probable molybdenum ABC transporter permease protein%3B~TIGRFAM: Molybdate ABC transporter%2C permease protein~IMG reference gene:2504785264~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: molybdate ABC transporter%2C permease protein gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1847 Thena_1848 Thena_1848 Thena_1848 1895101 1895892 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein COGs: COG0725 ABC-type molybdate transport system periplasmic component~InterPro IPR006059:IPR005950~KEGG: gct:GC56T3_0789 molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: Bacterial extracellular solute-binding%2C family 1~SPTR: Molybdenum ABC transporter%2C periplasmic molybdate-binding protein%3B~TIGRFAM: Molybdenum ABC transporter%2C periplasmic binding protein~IMG reference gene:2504785265~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1848 Thena_1849 Thena_1849 Thena_1849 1896211 1896834 - Ribosomal RNA small subunit methyltransferase G COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division~HAMAP: rRNA small subunit methyltransferase G~InterPro IPR003682~KEGG: nis:NIS_0358 16S rRNA methyltransferase GidB~PFAM: rRNA small subunit methyltransferase G~SPTR: Ribosomal RNA small subunit methyltransferase G%3B~IMG reference gene:2504785268~PFAM: rRNA small subunit methyltransferase G~TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1849 Thena_1850 Thena_1850 Thena_1850 1896821 1897456 - single-stranded nucleic acid binding R3H domain-containing protein COGs: COG1847 RNA-binding protein~InterPro IPR001374~KEGG: bbe:BBR47_59440 Jag protein~PFAM: Single-stranded nucleic acid binding R3H~SMART: Single-stranded nucleic acid binding R3H~SPTR: Probable Jag protein%3B~IMG reference gene:2504785269~PFAM: R3H domain gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1850 Thena_1851 Thena_1851 Thena_1851 1897456 1898100 - membrane protein insertase%2C YidC/Oxa1 family COGs: COG0706 Preprotein translocase subunit YidC~InterPro IPR001708:IPR020001~KEGG: cni:Calni_1028 membrane protein insertase%2C YidC/oxa1 family~PFAM: Membrane insertion protein%2C OxaA/YidC~SPTR: Membrane protein insertase%2C YidC/Oxa1 family%3B~TIGRFAM: Membrane insertion protein%2C OxaA/YidC%2C core~IMG reference gene:2504785270~PFAM: 60Kd inner membrane protein~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family%2C C-terminal domain gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1851 Thena_1852 Thena_1852 Thena_1852 1898100 1898354 - UPF0161 protein yidD COGs: COG0759 conserved hypothetical protein~HAMAP: Protein of unknown function DUF37~InterPro IPR002696~KEGG: cst:CLOST_2588 hypothetical protein~PFAM: Protein of unknown function DUF37~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Protein of unknown function DUF37~IMG reference gene:2504785271~PFAM: Domain of unknown function DUF37~TIGRFAM: conserved hypothetical protein YidD gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1852 Thena_1853 Thena_1853 Thena_1853 1898339 1898626 - hypothetical protein SPTR: Ribonuclease P protein component%3B~IMG reference gene:2504785272~PFAM: Ribonuclease P~TIGRFAM: ribonuclease P protein component%2C eubacterial gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1853 Thena_1854 Thena_1854 Thena_1854 1898661 1898804 - 50S ribosomal protein L34 HAMAP: 50S ribosomal protein L34~InterPro IPR000271~KEGG: msy:MS53_0601 50S ribosomal protein L34~PFAM: Ribosomal protein L34~SPTR: 50S ribosomal protein L34%3B~TIGRFAM: Ribosomal protein L34~IMG reference gene:2504785273~PFAM: Ribosomal protein L34~TIGRFAM: ribosomal protein L34%2C bacterial type gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_1854 Thena_R0001 Thena_R0001 Thena_R0001 119925 120000 - tRNA-Glu IMG reference gene:2504783476 tRNA gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0001 Thena_R0002 Thena_R0002 Thena_R0002 120011 120084 - tRNA-Gln IMG reference gene:2504783477 tRNA gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0002 Thena_R0003 Thena_R0003 Thena_R0003 120091 120166 - tRNA-Phe IMG reference gene:2504783478 tRNA gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0003 Thena_R0004 Thena_R0004 Thena_R0004 229874 229948 + tRNA-Pro IMG reference gene:2504783581 tRNA gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0004 Thena_R0005 Thena_R0005 Thena_R0005 244503 244577 + tRNA-Gln IMG reference gene:2504783599 tRNA gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0005 Thena_R0006 Thena_R0006 Thena_R0006 245597 245690 + tRNA-Sec IMG reference gene:2504783601 tRNA gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0006 Thena_R0007 Thena_R0007 Thena_R0007 285575 285667 + tRNA-Ser IMG reference gene:2504783636 tRNA gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0007 Thena_R0008 Thena_R0008 Thena_R0008 310145 310221 - tRNA-Lys IMG reference gene:2504783666 tRNA gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0008 Thena_R0009 Thena_R0009 Thena_R0009 334025 335532 + 16S ribosomal RNA IMG reference gene:2504783692 rRNA gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0009 Thena_R0010 Thena_R0010 Thena_R0010 335582 335658 + tRNA-Ile IMG reference gene:2504783693 tRNA gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0010 Thena_R0011 Thena_R0011 Thena_R0011 335679 335754 + tRNA-Ala IMG reference gene:2504783694 tRNA gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0011 Thena_R0012 Thena_R0012 Thena_R0012 335811 338814 + 23S ribosomal RNA IMG reference gene:2504783695 rRNA gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0012 Thena_R0013 Thena_R0013 Thena_R0013 338854 338958 + 5S ribosomal RNA IMG reference gene:2504783696 rRNA gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0013 Thena_R0014 Thena_R0014 Thena_R0014 352277 352368 - tRNA-Ser IMG reference gene:2504783706 tRNA gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0014 Thena_R0015 Thena_R0015 Thena_R0015 385254 385330 + tRNA-Met IMG reference gene:2504783744 tRNA gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0015 Thena_R0016 Thena_R0016 Thena_R0016 472372 472448 - tRNA-Arg IMG reference gene:2504783847 tRNA gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0016 Thena_R0017 Thena_R0017 Thena_R0017 537675 537749 + tRNA-Trp IMG reference gene:2504783932 tRNA gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0017 Thena_R0018 Thena_R0018 Thena_R0018 629435 629509 + tRNA-Met IMG reference gene:2504784034 tRNA gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0018 Thena_R0019 Thena_R0019 Thena_R0019 684663 684738 + tRNA-Gly IMG reference gene:2504784087 tRNA gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0019 Thena_R0020 Thena_R0020 Thena_R0020 684750 684826 + tRNA-Arg IMG reference gene:2504784088 tRNA gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0020 Thena_R0021 Thena_R0021 Thena_R0021 689130 689205 + tRNA-Glu IMG reference gene:2504784095 tRNA gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0021 Thena_R0022 Thena_R0022 Thena_R0022 689233 689307 + tRNA-Val IMG reference gene:2504784096 tRNA gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0022 Thena_R0023 Thena_R0023 Thena_R0023 710930 711004 + tRNA-Met IMG reference gene:2504784115 tRNA gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0023 Thena_R0024 Thena_R0024 Thena_R0024 741010 741100 + tRNA-Ser IMG reference gene:2504784147 tRNA gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0024 Thena_R0025 Thena_R0025 Thena_R0025 744234 744320 + tRNA-Leu IMG reference gene:2504784150 tRNA gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0025 Thena_R0026 Thena_R0026 Thena_R0026 778319 778394 + tRNA-Lys IMG reference gene:2504784183 tRNA gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0026 Thena_R0027 Thena_R0027 Thena_R0027 778407 778481 + tRNA-Asn IMG reference gene:2504784184 tRNA gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0027 Thena_R0028 Thena_R0028 Thena_R0028 780210 780294 + tRNA-Tyr IMG reference gene:2504784187 tRNA gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0028 Thena_R0029 Thena_R0029 Thena_R0029 780298 780373 + tRNA-Thr IMG reference gene:2504784188 tRNA gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0029 Thena_R0030 Thena_R0030 Thena_R0030 793639 793986 - component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 263.96~IMG reference gene:2504784201 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0030 Thena_R0031 Thena_R0031 Thena_R0031 906381 906456 + tRNA-Thr IMG reference gene:2504784301 tRNA gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0031 Thena_R0032 Thena_R0032 Thena_R0032 925708 925783 - tRNA-Thr IMG reference gene:2504784322 tRNA gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0032 Thena_R0033 Thena_R0033 Thena_R0033 934018 934101 + tRNA-Leu IMG reference gene:2504784331 tRNA gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0033 Thena_R0034 Thena_R0034 Thena_R0034 934115 934189 + tRNA-Gly IMG reference gene:2504784332 tRNA gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0034 Thena_R0035 Thena_R0035 Thena_R0035 1058750 1058826 - tRNA-Arg IMG reference gene:2504784446 tRNA gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0035 Thena_R0036 Thena_R0036 Thena_R0036 1069695 1069799 - 5S ribosomal RNA IMG reference gene:2504784457 rRNA gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0036 Thena_R0037 Thena_R0037 Thena_R0037 1069839 1072842 - 23S ribosomal RNA IMG reference gene:2504784458 rRNA gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0037 Thena_R0038 Thena_R0038 Thena_R0038 1072899 1072974 - tRNA-Ala IMG reference gene:2504784459 tRNA gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0038 Thena_R0039 Thena_R0039 Thena_R0039 1072995 1073071 - tRNA-Ile IMG reference gene:2504784460 tRNA gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0039 Thena_R0040 Thena_R0040 Thena_R0040 1073121 1074628 - 16S ribosomal RNA IMG reference gene:2504784461 rRNA gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0040 Thena_R0041 Thena_R0041 Thena_R0041 1127303 1127378 - tRNA-Ala IMG reference gene:2504784505 tRNA gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0041 Thena_R0042 Thena_R0042 Thena_R0042 1155315 1155401 + tRNA-Leu IMG reference gene:2504784529 tRNA gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0042 Thena_R0043 Thena_R0043 Thena_R0043 1155765 1155851 + tRNA-Leu IMG reference gene:2504784531 tRNA gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0043 Thena_R0044 Thena_R0044 Thena_R0044 1161324 1161399 - tRNA-Val IMG reference gene:2504784534 tRNA gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0044 Thena_R0045 Thena_R0045 Thena_R0045 1192050 1192124 - tRNA-Pro IMG reference gene:2504784563 tRNA gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0045 Thena_R0046 Thena_R0046 Thena_R0046 1205160 1205573 - CoA-binding domain protein COGs: COG1832 CoA-binding protein~InterPro IPR003781~KEGG: kcr:Kcr_0283 CoA-binding domain-containing protein~PFAM: CoA-binding~SPTR: CoA-binding domain protein%3B~tmRNA as predicted by Rfam (RF00023)%2C score 218.46~IMG reference gene:2504784578~PFAM: CoA binding domain gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0046 Thena_R0047 Thena_R0047 Thena_R0047 1270649 1270723 - tRNA-Pro IMG reference gene:2504784640 tRNA gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0047 Thena_R0048 Thena_R0048 Thena_R0048 1349717 1349791 - tRNA-Val IMG reference gene:2504784711 tRNA gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0048 Thena_R0049 Thena_R0049 Thena_R0049 1412201 1412292 - tRNA-Ser IMG reference gene:2504784774 tRNA gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0049 Thena_R0050 Thena_R0050 Thena_R0050 1554968 1555139 - 6S RNA 6S / SsrS RNA as predicted by Rfam (RF00013)%2C score 44.38~IMG reference gene:2504784917 ncRNA gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0050 Thena_R0051 Thena_R0051 Thena_R0051 1574160 1574236 + tRNA-Asp IMG reference gene:2504784933 tRNA gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0051 Thena_R0052 Thena_R0052 Thena_R0052 1626886 1626960 + tRNA-Gly IMG reference gene:2504784992 tRNA gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0052 Thena_R0053 Thena_R0053 Thena_R0053 1626971 1627045 + tRNA-Cys IMG reference gene:2504784993 tRNA gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0053 Thena_R0054 Thena_R0054 Thena_R0054 1627054 1627138 + tRNA-Leu IMG reference gene:2504784994 tRNA gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0054 Thena_R0055 Thena_R0055 Thena_R0055 1831268 1831378 + RNA component of signal recognition particle IMG reference gene:2504785193 gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0055 Thena_R0056 Thena_R0056 Thena_R0056 1896011 1896087 - tRNA-Arg IMG reference gene:2504785266 tRNA gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0056 Thena_R0057 Thena_R0057 Thena_R0057 1896094 1896168 - tRNA-His IMG reference gene:2504785267 tRNA gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Thena_R0057