locus_tag	old_locus_tag	gene	Name	start	end	strand	product	note	type	ID	NCBI
THEYE_A0001	THEYE_A0001	cobB	cobB	14	1387	+	cobyrinic Acid a%2Cc-diamide synthase	identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379	gene	gene0	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0001
THEYE_A0002	THEYE_A0002		THEYE_A0002	1380	2354	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0002
THEYE_A0003	THEYE_A0003		THEYE_A0003	2495	2830	+	sulfite reductase%2C dissimilatory-type gamma subunit	identified by match to protein family HMM PF04358%3B match to protein family HMM TIGR03342	gene	gene2	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0003
THEYE_A0004	THEYE_A0004		THEYE_A0004	2912	3430	+	conserved hypothetical protein		gene	gene3	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0004
THEYE_A0005	THEYE_A0005		THEYE_A0005	3456	4445	+	DsrM protein	identified by match to protein family HMM PF02665	gene	gene4	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0005
THEYE_A0006	THEYE_A0006		THEYE_A0006	4450	6063	+	DsrK protein	identified by match to protein family HMM PF00037	gene	gene5	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0006
THEYE_A0007	THEYE_A0007		THEYE_A0007	6065	6466	+	cytochrome c family protein		gene	gene6	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0007
THEYE_A0008	THEYE_A0008		THEYE_A0008	6463	7233	+	tetrathionate reductase%2C subunit B	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01409	gene	gene7	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0008
THEYE_A0009	THEYE_A0009		THEYE_A0009	7247	8437	+	polysulfide reductase%2C subunit C%2C putative	identified by match to protein family HMM PF03916	gene	gene8	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0009
THEYE_A0010	THEYE_A0010	pyrG	pyrG	8544	10190	-	CTP synthase	identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337	gene	gene9	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0010
THEYE_A0011	THEYE_A0011	kdsB	kdsB	10169	10936	-	3-deoxy-D-manno-octulosonate cytidylyltransferase	identified by match to protein family HMM PF02348%3B match to protein family HMM TIGR00466	gene	gene10	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0011
THEYE_A0012	THEYE_A0012	lnt	lnt	10969	12558	+	apolipoprotein N-acyltransferase	identified by match to protein family HMM PF00795%3B match to protein family HMM TIGR00546	gene	gene11	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0012
THEYE_A0013	THEYE_A0013		THEYE_A0013	12787	13650	+	peptide chain release factor 2	identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020	gene	gene12	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0013
THEYE_A0014	THEYE_A0014		THEYE_A0014	13686	13805	+	hypothetical protein	identified by glimmer%3B putative	gene	gene13	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0014
THEYE_A0015	THEYE_A0015	dnaA	dnaA	13985	15301	+	chromosomal replication initiator protein DnaA	identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362	gene	gene14	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0015
THEYE_A0016	THEYE_A0016	dnaN	dnaN	15325	16431	+	DNA polymerase III%2C beta subunit	identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663	gene	gene15	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0016
THEYE_A0017	THEYE_A0017	gyrB	gyrB	16436	18715	+	DNA gyrase%2C B subunit	identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059	gene	gene16	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0017
THEYE_A0018	THEYE_A0018	serS	serS	18724	19998	+	seryl-tRNA synthetase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414	gene	gene17	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0018
THEYE_A0019	THEYE_A0019		THEYE_A0019	19995	21182	+	hypothetical protein	identified by glimmer%3B putative	gene	gene18	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0019
THEYE_A0020	THEYE_A0020		THEYE_A0020	21179	21445	+	flagellar biosynthetic protein FlhB		gene	gene19	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0020
THEYE_A0021	THEYE_A0021	trpC	trpC	21442	22233	+	indole-3-glycerol phosphate synthase	identified by match to protein family HMM PF00218	gene	gene20	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0021
THEYE_A0022	THEYE_A0022		THEYE_A0022	22304	24094	+	indolepyruvate oxidoreductase subunit IorA	identified by match to protein family HMM PF00037%3B match to protein family HMM PF01855%3B match to protein family HMM PF02775	gene	gene21	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0022
THEYE_A0023	THEYE_A0023		THEYE_A0023	24104	24547	+	indolepyruvate oxidoreductase subunit IorB		gene	gene22	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0023
THEYE_A0024	THEYE_A0024		THEYE_A0024	24534	25811	+	phenylacetate-coenzyme A ligase		gene	gene23	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0024
THEYE_A0025	THEYE_A0025		THEYE_A0025	25850	26746	-	universal stress protein%2C putative	identified by match to protein family HMM PF00582	gene	gene24	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0025
THEYE_A0026	THEYE_A0026		THEYE_A0026	26757	27806	-	arsenic oxyanion-translocation pump	identified by match to protein family HMM PF01758	gene	gene25	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0026
THEYE_A0027	THEYE_A0027		THEYE_A0027	27818	28246	-	conserved hypothetical protein		gene	gene26	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0027
THEYE_A0028	THEYE_A0028		THEYE_A0028	28473	29459	+	galactose-1-phosphate uridylyltransferase		gene	gene27	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0028
THEYE_A0029	THEYE_A0029	acsA	acsA	29534	31501	-	acetate--CoA ligase	identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR02188	gene	gene28	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0029
THEYE_A0030	THEYE_A0030		THEYE_A0030	31548	33086	-	cation/acetate symporter ActP	identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813	gene	gene29	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0030
THEYE_A0031	THEYE_A0031		THEYE_A0031	33089	33385	-	inner membrane protein YjcH	identified by match to protein family HMM PF04341	gene	gene30	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0031
THEYE_A0032	THEYE_A0032		THEYE_A0032	33397	34089	-	DNA polymerase III alpha subunit	identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573	gene	gene31	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0032
THEYE_A0033	THEYE_A0033		THEYE_A0033	34092	35993	-	putative nucleotidyltransferase family	identified by match to protein family HMM PF00027%3B match to protein family HMM PF00571%3B match to protein family HMM PF03445	gene	gene32	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0033
THEYE_A0034	THEYE_A0034		THEYE_A0034	36117	37958	-	putative nucleotidyltransferase family	identified by match to protein family HMM PF00027%3B match to protein family HMM PF00571%3B match to protein family HMM PF03445	gene	gene33	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0034
THEYE_A0035	THEYE_A0035		THEYE_A0035	38193	40202	-	sodium/solute symporter%2C putative	identified by match to protein family HMM PF00474%3B match to protein family HMM TIGR00813	gene	gene34	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0035
THEYE_A0036	THEYE_A0036		THEYE_A0036	40205	40462	-	membrane protein		gene	gene35	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0036
THEYE_A0037	THEYE_A0037		THEYE_A0037	40474	41151	-	DNA polymerase III PolC-type%2C putative	identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573	gene	gene36	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0037
THEYE_A0038	THEYE_A0038		THEYE_A0038	41304	42539	-	oxalate/formate antiporter	identified by match to protein family HMM PF07690	gene	gene37	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0038
THEYE_A0039	THEYE_A0039		THEYE_A0039	42653	44002	-	acetoacetate metabolism regulatory protein AtoC	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF07728	gene	gene38	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0039
THEYE_A0040	THEYE_A0040		THEYE_A0040	43999	46695	-	acetyl-CoA synthetase	identified by match to protein family HMM PF00583%3B match to protein family HMM PF02629	gene	gene39	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0040
THEYE_A0041	THEYE_A0041	gyrA	gyrA	46682	49162	-	DNA gyrase%2C A subunit	identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063	gene	gene40	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0041
THEYE_A0042	THEYE_A0042		THEYE_A0042	49229	49429	-	putative regulatory protein%2C FmdB family	identified by match to protein family HMM TIGR02605	gene	gene41	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0042
THEYE_A0043	THEYE_A0043		THEYE_A0043	49542	50132	+	conserved hypothetical protein		gene	gene42	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0043
THEYE_A0044	THEYE_A0044		THEYE_A0044	50134	50901	+	conserved hypothetical protein	identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159	gene	gene43	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0044
THEYE_A0045	THEYE_A0045		THEYE_A0045	50898	51551	+	conserved hypothetical protein	identified by match to protein family HMM PF07949	gene	gene44	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0045
THEYE_A0046	THEYE_A0046	glmM	glmM	51551	52906	+	phosphoglucosamine mutase	identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455	gene	gene45	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0046
THEYE_A0047	THEYE_A0047		THEYE_A0047	52928	53602	-	phosphate import ATP-binding protein PstB 1	identified by match to protein family HMM PF00005	gene	gene46	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0047
THEYE_A0048	THEYE_A0048		THEYE_A0048	53593	54306	-	permease component of tungstate ABC transporter	identified by match to protein family HMM PF00528	gene	gene47	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0048
THEYE_A0049	THEYE_A0049		THEYE_A0049	54310	55116	-	extracellular tungstate binding protein		gene	gene48	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0049
THEYE_A0050	THEYE_A0050		THEYE_A0050	55404	55808	-	molybdenum transport regulatory protein ModE	identified by match to protein family HMM PF00126	gene	gene49	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0050
THEYE_A0051	THEYE_A0051		THEYE_A0051	55914	56270	-	protein of unknown function	identified by match to protein family HMM PF04519	gene	gene50	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0051
THEYE_A0052	THEYE_A0052		THEYE_A0052	56270	57106	-	membrane protein	identified by match to protein family HMM PF01551	gene	gene51	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0052
THEYE_A0053	THEYE_A0053		THEYE_A0053	57226	58032	+	conserved hypothetical protein		gene	gene52	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0053
THEYE_A0054	THEYE_A0054	xerD	xerD	57998	58882	+	tyrosine recombinase XerD	identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02225	gene	gene53	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0054
THEYE_A0055	THEYE_A0055		THEYE_A0055	58905	59024	+	hypothetical protein	identified by glimmer%3B putative	gene	gene54	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0055
THEYE_A0056	THEYE_A0056		THEYE_A0056	59109	59867	+	conjugative transfer: surface exclusion	identified by match to protein family HMM PF05818	gene	gene55	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0056
THEYE_A0057	THEYE_A0057		THEYE_A0057	59998	60714	+	hypothetical protein	identified by glimmer%3B putative	gene	gene56	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0057
THEYE_A0058	THEYE_A0058		THEYE_A0058	61809	61922	+	hypothetical protein	identified by glimmer%3B putative	gene	gene58	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0058
THEYE_A0059	THEYE_A0059		THEYE_A0059	60750	61820	-	CRISPR-associated protein%2C NE0113 family	identified by match to protein family HMM TIGR02584	gene	gene57	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0059
THEYE_A0060	THEYE_A0060	csm1_1	csm1_1	62669	64978	+	CRISPR-associated protein%2C Csm1 family	identified by match to protein family HMM TIGR02578	gene	gene59	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0060
THEYE_A0061	THEYE_A0061	csm2_1	csm2_1	64971	65420	+	CRISPR-associated protein%2C Csm2 family	identified by match to protein family HMM TIGR01870	gene	gene60	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0061
THEYE_A0062	THEYE_A0062	csm3_1	csm3_1	65420	66205	+	CRISPR-associated RAMP protein%2C Csm3 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR02582	gene	gene61	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0062
THEYE_A0063	THEYE_A0063	csm4	csm4	66218	67201	+	CRISPR-associated RAMP protein%2C Csm4 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR01903	gene	gene62	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0063
THEYE_A0064	THEYE_A0064	csm5_1	csm5_1	67206	68357	+	CRISPR-associated RAMP protein%2C Csm5 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR01899	gene	gene63	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0064
THEYE_A0065	THEYE_A0065		THEYE_A0065	68361	69107	+	hypothetical protein	identified by glimmer%3B putative	gene	gene64	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0065
THEYE_A0066	THEYE_A0066		THEYE_A0066	69137	70288	+	hypothetical protein	identified by glimmer%3B putative	gene	gene65	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0066
THEYE_A0067	THEYE_A0067		THEYE_A0067	70291	70539	+	hypothetical protein	identified by glimmer%3B putative	gene	gene66	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0067
THEYE_A0068	THEYE_A0068	cas6_1	cas6_1	70542	71480	+	CRISPR-associated protein Cas6	identified by match to protein family HMM TIGR01877	gene	gene67	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0068
THEYE_A0069	THEYE_A0069		THEYE_A0069	71533	73782	+	DNA internalization-related competence protein ComEC/Rec2	identified by match to protein family HMM PF00753%3B match to protein family HMM PF03772%3B match to protein family HMM TIGR00360%3B match to protein family HMM TIGR00361	gene	gene68	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0069
THEYE_A0070	THEYE_A0070	hisH	hisH	73792	74403	+	imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit	identified by match to protein family HMM PF00117%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR01855	gene	gene69	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0070
THEYE_A0071	THEYE_A0071	selB	selB	74400	76271	+	selenocysteine-specific translation elongation factor	identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM PF09107%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00475	gene	gene70	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0071
THEYE_A0072	THEYE_A0072		THEYE_A0072	76273	77703	+	MucD	identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02037	gene	gene71	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0072
THEYE_A0073	THEYE_A0073		THEYE_A0073	77790	78704	+	pili retraction protein PilT	identified by match to protein family HMM PF01850%3B match to protein family HMM PF01938	gene	gene72	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0073
THEYE_A0074	THEYE_A0074		THEYE_A0074	78706	79869	+	IspD/IspF bifunctional enzyme	identified by match to protein family HMM PF01128%3B match to protein family HMM PF02542%3B match to protein family HMM TIGR00151%3B match to protein family HMM TIGR00453	gene	gene73	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0074
THEYE_A0075	THEYE_A0075		THEYE_A0075	79858	80874	-	hydroxyacid oxidase 1	identified by match to protein family HMM PF01070%3B match to protein family HMM PF01180	gene	gene74	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0075
THEYE_A0076	THEYE_A0076		THEYE_A0076	80924	80999	+	tRNA-Ala		tRNA	gene75	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0076
THEYE_A0077	THEYE_A0077		THEYE_A0077	81341	81425	-	tRNA-Leu		tRNA	gene76	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0077
THEYE_A0078	THEYE_A0078		THEYE_A0078	81657	82595	+	radical SAM protein%2C family	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212	gene	gene77	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0078
THEYE_A0079	THEYE_A0079		THEYE_A0079	82540	84066	+	putative Mg chelatase	identified by match to protein family HMM PF01078%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00368	gene	gene78	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0079
THEYE_A0080	THEYE_A0080		THEYE_A0080	84067	84708	+	conserved protein	identified by match to protein family HMM PF01810	gene	gene79	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0080
THEYE_A0081	THEYE_A0081	glgB	glgB	84760	86670	+	1%2C4-alpha-glucan branching enzyme	identified by match to protein family HMM PF00128%3B match to protein family HMM PF02806%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR01515	gene	gene80	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0081
THEYE_A0082	THEYE_A0082		THEYE_A0082	86829	87641	+	methyltransferase	identified by match to protein family HMM PF02390%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene81	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0082
THEYE_A0083	THEYE_A0083		THEYE_A0083	87813	89015	+	Na/H+ antiporter	identified by match to protein family HMM PF00999	gene	gene82	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0083
THEYE_A0084	THEYE_A0084		THEYE_A0084	89005	90357	-	conserved hypothetical protein	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01415	gene	gene83	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0084
THEYE_A0085	THEYE_A0085		THEYE_A0085	90463	90879	+	hypothetical protein	identified by glimmer%3B putative	gene	gene84	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0085
THEYE_A0086	THEYE_A0086		THEYE_A0086	90872	91063	+	conserved hypothetical protein		gene	gene85	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0086
THEYE_A0087	THEYE_A0087		THEYE_A0087	91085	91867	+	lipoate protein ligase%2C putative	identified by match to protein family HMM PF03099	gene	gene86	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0087
THEYE_A0088	THEYE_A0088		THEYE_A0088	92461	92658	+	hypothetical protein	identified by glimmer%3B putative	gene	gene87	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0088
THEYE_A0089	THEYE_A0089		THEYE_A0089	92708	93517	-	conserved hypothetical protein	identified by match to protein family HMM PF06230	gene	gene88	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0089
THEYE_A0090	THEYE_A0090	lpxA	lpxA	93508	94284	-	acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01852	gene	gene89	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0090
THEYE_A0091	THEYE_A0091	fabZ	fabZ	94297	94719	-	beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ	identified by match to protein family HMM PF07977%3B match to protein family HMM TIGR01750	gene	gene90	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0091
THEYE_A0092	THEYE_A0092	lpxD	lpxD	94737	95765	-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	identified by match to protein family HMM PF00132%3B match to protein family HMM PF04613%3B match to protein family HMM TIGR01853	gene	gene91	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0092
THEYE_A0093	THEYE_A0093		THEYE_A0093	95762	96298	-	outer membrane protein%2C putative	identified by match to protein family HMM PF03938	gene	gene92	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0093
THEYE_A0094	THEYE_A0094		THEYE_A0094	96313	98559	-	outer membrane protein%2C putative	identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244%3B match to protein family HMM TIGR03303	gene	gene93	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0094
THEYE_A0095	THEYE_A0095		THEYE_A0095	98593	99972	-	phosphomannomutase/phosphoglucomutase	identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880	gene	gene94	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0095
THEYE_A0096	THEYE_A0096		THEYE_A0096	99953	101374	-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	identified by match to protein family HMM PF00483%3B match to protein family HMM PF01050%3B match to protein family HMM PF07883%3B match to protein family HMM TIGR01479	gene	gene95	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0096
THEYE_A0097	THEYE_A0097	ribE	ribE	101384	102034	-	riboflavin synthase%2C alpha subunit	identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187	gene	gene96	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0097
THEYE_A0098	THEYE_A0098	lepB	lepB	102034	102639	-	signal peptidase I	identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227	gene	gene97	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0098
THEYE_A0099	THEYE_A0099	lepA	lepA	102650	104431	-	GTP-binding protein LepA	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393	gene	gene98	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0099
THEYE_A0100	THEYE_A0100		THEYE_A0100	104438	105391	-	transcriptional regulator	identified by match to protein family HMM PF00480	gene	gene99	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0100
THEYE_A0101	THEYE_A0101	fabG	fabG	105525	106262	+	3-oxoacyl-(acyl-carrier-protein) reductase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830	gene	gene100	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0101
THEYE_A0102	THEYE_A0102	acpP	acpP	106286	106522	+	acyl carrier protein	identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517	gene	gene101	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0102
THEYE_A0103	THEYE_A0103		THEYE_A0103	106529	107776	+	beta-ketoacyl-acyl carrier protein synthase II	identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150	gene	gene102	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0103
THEYE_A0104	THEYE_A0104		THEYE_A0104	107773	107934	-	hypothetical protein	identified by glimmer%3B putative	gene	gene103	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0104
THEYE_A0105	THEYE_A0105		THEYE_A0105	108194	108559	+	hypothetical protein	identified by glimmer%3B putative	gene	gene104	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0105
THEYE_A0106	THEYE_A0106		THEYE_A0106	108592	109008	+	hypothetical protein	identified by glimmer%3B putative	gene	gene105	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0106
THEYE_A0107	THEYE_A0107		THEYE_A0107	109018	109587	+	hypothetical protein	identified by glimmer%3B putative	gene	gene106	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0107
THEYE_A0108	THEYE_A0108		THEYE_A0108	109694	109936	-	conserved domain protein	identified by match to protein family HMM PF02597	gene	gene107	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0108
THEYE_A0109	THEYE_A0109		THEYE_A0109	109988	111718	-	tungsten-containing aldehyde ferredoxin oxidoreductase	identified by match to protein family HMM PF01314%3B match to protein family HMM PF02730	gene	gene108	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0109
THEYE_A0110	THEYE_A0110		THEYE_A0110	111759	113033	-	radical SAM domain protein%2C putative	identified by match to protein family HMM PF04055	gene	gene109	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0110
THEYE_A0111	THEYE_A0111	ahcY	ahcY	113030	114289	-	adenosylhomocysteinase	identified by match to protein family HMM PF00670%3B match to protein family HMM PF02826%3B match to protein family HMM PF05221%3B match to protein family HMM TIGR00936	gene	gene110	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0111
THEYE_A0112	THEYE_A0112	metK	metK	114283	115443	-	S-adenosylmethionine synthetase	identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034	gene	gene111	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0112
THEYE_A0113	THEYE_A0113	asd	asd	115479	116501	-	aspartate-semialdehyde dehydrogenase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296	gene	gene112	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0113
THEYE_A0114	THEYE_A0114		THEYE_A0114	116504	117622	-	3-isopropylmalate dehydrogenase	identified by match to protein family HMM PF00180	gene	gene113	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0114
THEYE_A0115	THEYE_A0115	leuD	leuD	117619	118125	-	3-isopropylmalate dehydratase%2C small subunit	identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR02084%3B match to protein family HMM TIGR02087	gene	gene114	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0115
THEYE_A0116	THEYE_A0116		THEYE_A0116	118358	118936	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene115	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0116
THEYE_A0117	THEYE_A0117		THEYE_A0117	118933	120249	+	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene116	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0117
THEYE_A0118	THEYE_A0118		THEYE_A0118	120246	121340	+	multidrug resistance protein A	identified by match to protein family HMM PF00529	gene	gene117	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0118
THEYE_A0119	THEYE_A0119		THEYE_A0119	121337	122596	+	outer membrane efflux protein	identified by match to protein family HMM PF02321	gene	gene118	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0119
THEYE_A0120	THEYE_A0120		THEYE_A0120	122593	123753	+	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730	gene	gene119	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0120
THEYE_A0121	THEYE_A0121		THEYE_A0121	123756	124439	+	ABC transporter ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene120	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0121
THEYE_A0122	THEYE_A0122		THEYE_A0122	124436	125665	+	ABC transporter permease protein	identified by match to protein family HMM PF02687	gene	gene121	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0122
THEYE_A0123	THEYE_A0123		THEYE_A0123	125685	125776	+	tRNA-Ser		tRNA	gene122	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0123
THEYE_A0124	THEYE_A0124		THEYE_A0124	125844	127211	-	acetoacetate metabolism regulatory protein AtoC	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene123	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0124
THEYE_A0125	THEYE_A0125		THEYE_A0125	127208	129142	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448	gene	gene124	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0125
THEYE_A0126	THEYE_A0126		THEYE_A0126	129275	131161	+	sensor histidine kinase/response regulator	identified by match to protein family HMM PF02518	gene	gene125	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0126
THEYE_A0127	THEYE_A0127		THEYE_A0127	131556	133913	-	MutS2 family protein	identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713	gene	gene126	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0127
THEYE_A0128	THEYE_A0128		THEYE_A0128	133910	134245	-	general stress protein		gene	gene127	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0128
THEYE_A0129	THEYE_A0129		THEYE_A0129	134360	134653	+	methyltransferase		gene	gene128	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0129
THEYE_A0130	THEYE_A0130		THEYE_A0130	134654	135661	-	Ca2+/Na+ antiporter	identified by match to protein family HMM PF01699	gene	gene129	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0130
THEYE_A0131	THEYE_A0131		THEYE_A0131	135727	137952	+	ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent	identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM TIGR02504	gene	gene130	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0131
THEYE_A0132	THEYE_A0132	groS1	groS1	137967	138356	+	chaperonin GroS	identified by match to protein family HMM PF00166	gene	gene131	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0132
THEYE_A0133	THEYE_A0133		THEYE_A0133	138340	139008	+	conserved hypothetical protein	identified by match to protein family HMM PF03641%3B match to protein family HMM TIGR00730	gene	gene132	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0133
THEYE_A0134	THEYE_A0134		THEYE_A0134	139008	140036	+	radical SAM enzyme%2C Cfr family	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048	gene	gene133	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0134
THEYE_A0135	THEYE_A0135		THEYE_A0135	140037	140801	-	lipoprotein%2C putative	identified by match to protein family HMM PF03692	gene	gene134	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0135
THEYE_A0136	THEYE_A0136		THEYE_A0136	140801	141202	-	conserved hypothetical protein	identified by match to protein family HMM PF01894%3B match to protein family HMM TIGR00149	gene	gene135	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0136
THEYE_A0137	THEYE_A0137		THEYE_A0137	141202	142362	-	aminotransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR03540	gene	gene136	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0137
THEYE_A0138	THEYE_A0138		THEYE_A0138	142438	143088	-	TonB domain protein%2C putative	identified by match to protein family HMM PF03544%3B match to protein family HMM TIGR01352	gene	gene137	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0138
THEYE_A0139	THEYE_A0139		THEYE_A0139	143265	144305	-	ATPase		gene	gene138	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0139
THEYE_A0140	THEYE_A0140	mtgA	mtgA	144375	145190	+	monofunctional biosynthetic peptidoglycan transglycosylase	identified by match to protein family HMM PF00912%3B match to protein family HMM TIGR02070	gene	gene139	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0140
THEYE_A0141	THEYE_A0141	malQ	malQ	145150	147177	-	4-alpha-glucanotransferase	identified by match to protein family HMM PF02446%3B match to protein family HMM TIGR00217	gene	gene140	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0141
THEYE_A0142	THEYE_A0142		THEYE_A0142	147167	148459	-	ABC transporter ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene141	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0142
THEYE_A0143	THEYE_A0143		THEYE_A0143	148462	150174	-	ABC transporter permease protein	identified by match to protein family HMM PF00528	gene	gene142	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0143
THEYE_A0144	THEYE_A0144		THEYE_A0144	150363	151406	+	lipoprotein%2C putative		gene	gene143	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0144
THEYE_A0145	THEYE_A0145		THEYE_A0145	151403	153955	+	conserved hypothetical protein	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene144	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0145
THEYE_A0146	THEYE_A0146		THEYE_A0146	153941	154318	-	sensory box histidine kinase/response regulator	identified by match to protein family HMM PF00072	gene	gene145	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0146
THEYE_A0147	THEYE_A0147	hemL	hemL	154397	155680	+	glutamate-1-semialdehyde-2%2C1-aminomutase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00713	gene	gene146	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0147
THEYE_A0148	THEYE_A0148		THEYE_A0148	155677	156201	+	conserved hypothetical protein		gene	gene147	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0148
THEYE_A0149	THEYE_A0149		THEYE_A0149	156194	156454	+	conserved hypothetical protein		gene	gene148	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0149
THEYE_A0150	THEYE_A0150		THEYE_A0150	156423	156788	+	hypothetical protein	identified by glimmer%3B putative	gene	gene149	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0150
THEYE_A0151	THEYE_A0151		THEYE_A0151	156785	156943	+	hypothetical protein	identified by glimmer%3B putative	gene	gene150	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0151
THEYE_A0152	THEYE_A0152	pgi	pgi	156930	158252	+	glucose-6-phosphate isomerase	identified by match to protein family HMM PF00342	gene	gene151	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0152
THEYE_A0153	THEYE_A0153		THEYE_A0153	158249	158800	-	thermonuclease	identified by match to protein family HMM PF00565	gene	gene152	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0153
THEYE_A0154	THEYE_A0154	aroK	aroK	158815	159336	+	shikimate kinase	identified by match to protein family HMM PF01202	gene	gene153	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0154
THEYE_A0155	THEYE_A0155	aroB	aroB	159323	160402	+	3-dehydroquinate synthase	identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357	gene	gene154	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0155
THEYE_A0156	THEYE_A0156		THEYE_A0156	160395	161084	+	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene155	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0156
THEYE_A0157	THEYE_A0157		THEYE_A0157	161090	162268	+	alkaline phosphatase synthesis sensor protein PhoR	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene156	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0157
THEYE_A0158	THEYE_A0158		THEYE_A0158	162291	162794	+	Fe2+/Zn2+ uptake regulation protein	identified by match to protein family HMM PF01475	gene	gene157	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0158
THEYE_A0159	THEYE_A0159		THEYE_A0159	162837	163253	+	bacterioferritin	identified by match to protein family HMM PF00210%3B match to protein family HMM PF02915	gene	gene158	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0159
THEYE_A0160	THEYE_A0160		THEYE_A0160	163256	164470	+	rubredoxin-oxygen oxidoreductase	identified by match to protein family HMM PF00258%3B match to protein family HMM PF00753	gene	gene159	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0160
THEYE_A0161	THEYE_A0161		THEYE_A0161	164485	164979	+	rubrerythrin	identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915	gene	gene160	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0161
THEYE_A0162	THEYE_A0162		THEYE_A0162	165023	165595	+	NADPH-dependent fmn reductase	identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358	gene	gene161	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0162
THEYE_A0163	THEYE_A0163		THEYE_A0163	165588	166496	+	coenzyme PQQ synthesis protein%2C putative	identified by match to protein family HMM PF04055	gene	gene162	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0163
THEYE_A0164	THEYE_A0164		THEYE_A0164	166493	167266	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene163	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0164
THEYE_A0165	THEYE_A0165		THEYE_A0165	167257	168507	+	SufB/sufD domain protein	identified by match to protein family HMM PF01458	gene	gene164	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0165
THEYE_A0166	THEYE_A0166		THEYE_A0166	168569	170026	-	MucD	identified by match to protein family HMM PF00089%3B match to protein family HMM PF00595%3B match to protein family HMM TIGR02037	gene	gene165	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0166
THEYE_A0167	THEYE_A0167		THEYE_A0167	170057	170701	-	transaldolase%2C putative	identified by match to protein family HMM PF00923%3B match to protein family HMM TIGR00875	gene	gene166	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0167
THEYE_A0168	THEYE_A0168		THEYE_A0168	170698	171495	-	conserved hypothetical protein	identified by match to protein family HMM PF03692	gene	gene167	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0168
THEYE_A0169	THEYE_A0169		THEYE_A0169	171470	172636	-	anaerobic glycerol-3-phosphate dehydrogenase%2C subunit C%2C putative	identified by match to protein family HMM PF02754	gene	gene168	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0169
THEYE_A0170	THEYE_A0170		THEYE_A0170	172639	174183	-	ribonuclease G	identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR00757	gene	gene169	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0170
THEYE_A0171	THEYE_A0171		THEYE_A0171	174180	176597	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene170	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0171
THEYE_A0172	THEYE_A0172		THEYE_A0172	176634	177248	-	LssE protein	identified by match to protein family HMM PF00563	gene	gene171	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0172
THEYE_A0173	THEYE_A0173		THEYE_A0173	177515	179761	-		PAS domain S-box/GAF domain/cyclic diguanylate phosphodiesterase%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to GB:AAU92273.1%3B match to protein family HMM PF00989%3B match to protein family HMM PF00990%3B match to protein family HMM PF01590%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	pseudogene	gene172	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0173
THEYE_A0174	THEYE_A0174		THEYE_A0174	179763	180638	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene173	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0174
THEYE_A0175	THEYE_A0175		THEYE_A0175	180651	181439	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene174	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0175
THEYE_A0176	THEYE_A0176		THEYE_A0176	181493	184144	-	cytochrome c family protein		gene	gene175	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0176
THEYE_A0177	THEYE_A0177		THEYE_A0177	184141	185187	-	membrane protein%2C putative		gene	gene176	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0177
THEYE_A0178	THEYE_A0178		THEYE_A0178	185460	186704	-	conserved hypothetical protein		gene	gene177	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0178
THEYE_A0179	THEYE_A0179		THEYE_A0179	186952	187158	+	hypothetical protein	identified by glimmer%3B putative	gene	gene178	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0179
THEYE_A0180	THEYE_A0180		THEYE_A0180	187136	187342	+	conserved hypothetical protein		gene	gene179	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0180
THEYE_A0181	THEYE_A0181		THEYE_A0181	187356	188858	-	response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277	gene	gene180	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0181
THEYE_A0182	THEYE_A0182		THEYE_A0182	188855	189232	-	response regulator receiver	identified by match to protein family HMM PF00072	gene	gene181	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0182
THEYE_A0183	THEYE_A0183		THEYE_A0183	189234	191090	-	two component system histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene182	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0183
THEYE_A0184	THEYE_A0184		THEYE_A0184	191178	191513	-	hypothetical protein	identified by glimmer%3B putative	gene	gene183	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0184
THEYE_A0185	THEYE_A0185		THEYE_A0185	191510	191962	-	conserved hypothetical protein		gene	gene184	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0185
THEYE_A0186	THEYE_A0186	lgt	lgt	191959	192732	-	prolipoprotein diacylglyceryl transferase	identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544	gene	gene185	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0186
THEYE_A0187	THEYE_A0187		THEYE_A0187	192711	193058	-	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene186	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0187
THEYE_A0188	THEYE_A0188		THEYE_A0188	193099	194496	+	sensory box histidine kinase	identified by match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene187	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0188
THEYE_A0189	THEYE_A0189		THEYE_A0189	194493	195164	-	menaquinone biosynthesis methyltransferase UbiE	identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR01934	gene	gene188	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0189
THEYE_A0190	THEYE_A0190	tgt	tgt	196009	197160	-	queuine tRNA-ribosyltransferase	identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449	gene	gene189	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0190
THEYE_A0191	THEYE_A0191		THEYE_A0191	197274	198893	-	hybrid cluster protein	identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703	gene	gene190	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0191
THEYE_A0192	THEYE_A0192		THEYE_A0192	199051	199488	+	quinol oxidase	identified by match to protein family HMM TIGR03153	gene	gene191	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0192
THEYE_A0193	THEYE_A0193	nrfA	nrfA	199501	200967	+	nitrite reductase (cytochrome%3B ammonia-forming)	identified by match to protein family HMM PF02335	gene	gene192	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0193
THEYE_A0194	THEYE_A0194		THEYE_A0194	201055	201723	+	transcriptional regulator%2C putative	identified by match to protein family HMM PF00027%3B match to protein family HMM PF00325	gene	gene193	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0194
THEYE_A0195	THEYE_A0195		THEYE_A0195	201748	201948	+	conserved hypothetical protein		gene	gene194	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0195
THEYE_A0196	THEYE_A0196		THEYE_A0196	201926	202789	-	serine/threonine phosphatase type 1%2C putative	identified by match to protein family HMM PF00149	gene	gene195	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0196
THEYE_A0197	THEYE_A0197		THEYE_A0197	202773	203408	-	conserved hypothetical protein	identified by match to protein family HMM PF03130	gene	gene196	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0197
THEYE_A0198	THEYE_A0198		THEYE_A0198	203450	204025	+	L-fuculose phosphate aldolase	identified by match to protein family HMM PF00596	gene	gene197	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0198
THEYE_A0199	THEYE_A0199	rfaD	rfaD	204028	204993	-	ADP-L-glycero-D-manno-heptose-6-epimerase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM TIGR02197	gene	gene198	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0199
THEYE_A0200	THEYE_A0200		THEYE_A0200	205192	205536	+	heavy metal resistance transcription regulator	identified by match to protein family HMM PF01022	gene	gene199	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0200
THEYE_A0201	THEYE_A0201		THEYE_A0201	205552	206721	+	permease	identified by match to protein family HMM PF03773	gene	gene200	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0201
THEYE_A0202	THEYE_A0202		THEYE_A0202	206789	207529	-	hemolysin A	identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478	gene	gene201	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0202
THEYE_A0203	THEYE_A0203		THEYE_A0203	207532	208419	-	geranylgeranyl pyrophosphate synthetase%2C (ggppsynthetase) (ggps)	identified by match to protein family HMM PF00348	gene	gene202	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0203
THEYE_A0204	THEYE_A0204		THEYE_A0204	208424	208936	-	paREP15%2C putative coiled-coil protein		gene	gene203	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0204
THEYE_A0205	THEYE_A0205		THEYE_A0205	209016	210548	-	GMP synthase (glutamine-hydrolyzing)	identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888	gene	gene204	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0205
THEYE_A0206	THEYE_A0206	guaB	guaB	210550	212010	-	inosine-5'-monophosphate dehydrogenase	identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM PF03060%3B match to protein family HMM TIGR01302	gene	gene205	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0206
THEYE_A0207	THEYE_A0207		THEYE_A0207	212073	212148	+	tRNA-Arg		tRNA	gene206	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0207
THEYE_A0208	THEYE_A0208		THEYE_A0208	212146	213369	-	riboflavin biosynthesis protein RibA	identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506	gene	gene207	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0208
THEYE_A0209	THEYE_A0209		THEYE_A0209	213517	214836	+	hypothetical protein	identified by glimmer%3B putative	gene	gene208	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0209
THEYE_A0210	THEYE_A0210		THEYE_A0210	214802	215371	+	hypothetical protein	identified by glimmer%3B putative	gene	gene209	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0210
THEYE_A0211	THEYE_A0211		THEYE_A0211	215355	215786	+	hypothetical protein	identified by glimmer%3B putative	gene	gene210	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0211
THEYE_A0212	THEYE_A0212		THEYE_A0212	215762	217378	+	type II protein secretion protein-like protein	identified by match to protein family HMM PF00263%3B match to protein family HMM TIGR02519	gene	gene211	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0212
THEYE_A0213	THEYE_A0213		THEYE_A0213	217375	219015	+	type IV pilin	identified by match to protein family HMM PF00437%3B match to protein family HMM PF05157	gene	gene212	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0213
THEYE_A0214	THEYE_A0214		THEYE_A0214	219012	220223	+	pilin secretion/fimbrial assembly system protein%2C PilC%2C putative	identified by match to protein family HMM PF00482	gene	gene213	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0214
THEYE_A0215	THEYE_A0215		THEYE_A0215	220225	221049	+	general secretion pathway protein A		gene	gene214	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0215
THEYE_A0216	THEYE_A0216		THEYE_A0216	221072	221623	+	hypothetical protein	identified by glimmer%3B putative	gene	gene215	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0216
THEYE_A0217	THEYE_A0217		THEYE_A0217	221620	223284	-	ATP-dependent DNA helicase PcrA	identified by match to protein family HMM PF00580	gene	gene216	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0217
THEYE_A0218	THEYE_A0218		THEYE_A0218	223285	224547	-	DNA and RNA helicase		gene	gene217	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0218
THEYE_A0219	THEYE_A0219		THEYE_A0219	224550	225257	-	1-acyl-sn-glycerol-3-phosphate acyltransferase%2C putative	identified by match to protein family HMM PF01553	gene	gene218	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0219
THEYE_A0220	THEYE_A0220		THEYE_A0220	225254	225928	-	ExsB protein	identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364	gene	gene219	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0220
THEYE_A0221	THEYE_A0221		THEYE_A0221	225925	226518	-	conserved hypothetical protein	identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023	gene	gene220	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0221
THEYE_A0222	THEYE_A0222	pgsA	pgsA	226515	227051	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560	gene	gene221	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0222
THEYE_A0223	THEYE_A0223		THEYE_A0223	227032	228030	-	bifunctional protein HldE	identified by match to protein family HMM PF01467%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01670%3B match to protein family HMM TIGR02199	gene	gene222	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0223
THEYE_A0224	THEYE_A0224		THEYE_A0224	228023	228433	-	AP4A hydrolase	identified by match to protein family HMM PF00293	gene	gene223	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0224
THEYE_A0225	THEYE_A0225		THEYE_A0225	228433	229497	-	membrane-associated zinc metalloprotease%2C putative	identified by match to protein family HMM PF00595%3B match to protein family HMM PF02163%3B match to protein family HMM TIGR00054	gene	gene224	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0225
THEYE_A0226	THEYE_A0226	dxr	dxr	229494	230639	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase	identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243	gene	gene225	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0226
THEYE_A0227	THEYE_A0227	cdsA	cdsA	230649	231437	-	phosphatidate cytidylyltransferase	identified by match to protein family HMM PF01148	gene	gene226	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0227
THEYE_A0228	THEYE_A0228	uppS	uppS	231418	232125	-	di-trans%2Cpoly-cis-decaprenylcistransferase	identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055	gene	gene227	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0228
THEYE_A0229	THEYE_A0229		THEYE_A0229	232128	233795	-	hypothetical protein	identified by glimmer%3B putative	gene	gene228	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0229
THEYE_A0230	THEYE_A0230		THEYE_A0230	233941	234459	+	hypothetical protein	identified by glimmer%3B putative	gene	gene229	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0230
THEYE_A0231	THEYE_A0231		THEYE_A0231	234440	234922	+	conserved hypothetical protein	identified by match to protein family HMM PF03968%3B match to protein family HMM TIGR03002	gene	gene230	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0231
THEYE_A0232	THEYE_A0232		THEYE_A0232	234919	235656	+	unclassified ABC-type transport system%2C ATPase component	identified by match to protein family HMM PF00005	gene	gene231	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0232
THEYE_A0233	THEYE_A0233	rpoN	rpoN	235656	237071	+	RNA polymerase sigma-54 factor	identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395	gene	gene232	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0233
THEYE_A0234	THEYE_A0234		THEYE_A0234	237083	237604	+	SSU ribosomal protein S30P	identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741	gene	gene233	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0234
THEYE_A0235	THEYE_A0235		THEYE_A0235	237617	238468	+	conserved hypothetical protein	identified by match to protein family HMM PF03668	gene	gene234	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0235
THEYE_A0236	THEYE_A0236		THEYE_A0236	238595	239014	+	ATP synthase B' chain%2C putative	identified by match to protein family HMM PF00430	gene	gene235	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0236
THEYE_A0237	THEYE_A0237	atpF	atpF	239026	239592	+	ATP synthase F0%2C B subunit	identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144	gene	gene236	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0237
THEYE_A0238	THEYE_A0238	atpH	atpH	239589	240134	+	ATP synthase F1%2C delta subunit	identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145	gene	gene237	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0238
THEYE_A0239	THEYE_A0239	atpA	atpA	240141	241649	+	ATP synthase F1%2C alpha subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR00962	gene	gene238	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0239
THEYE_A0240	THEYE_A0240	atpG	atpG	241681	242568	+	ATP synthase F1%2C gamma subunit	identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146	gene	gene239	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0240
THEYE_A0241	THEYE_A0241	atpD	atpD	242605	244026	+	ATP synthase F1%2C beta subunit	identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039	gene	gene240	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0241
THEYE_A0242	THEYE_A0242	atpC	atpC	244043	244465	+	ATP synthase F1%2C epsilon subunit	identified by match to protein family HMM PF00401%3B match to protein family HMM PF02823%3B match to protein family HMM TIGR01216	gene	gene241	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0242
THEYE_A0243	THEYE_A0243		THEYE_A0243	244911	245078	-	hypothetical protein	identified by glimmer%3B putative	gene	gene242	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0243
THEYE_A0244	THEYE_A0244		THEYE_A0244	245091	246833	-	hypothetical membrane protein	identified by match to protein family HMM PF03601	gene	gene243	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0244
THEYE_A0245	THEYE_A0245		THEYE_A0245	247409	247816	+	S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC)	identified by match to protein family HMM PF02675	gene	gene244	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0245
THEYE_A0246	THEYE_A0246		THEYE_A0246	247791	248690	+	spermidine synthase 1	identified by match to protein family HMM PF01564	gene	gene245	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0246
THEYE_A0247	THEYE_A0247	pgk	pgk	248687	249901	-	phosphoglycerate kinase	identified by match to protein family HMM PF00162	gene	gene246	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0247
THEYE_A0248	THEYE_A0248	gap	gap	249912	250916	-	glyceraldehyde-3-phosphate dehydrogenase%2C type I	identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534	gene	gene247	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0248
THEYE_A0249	THEYE_A0249		THEYE_A0249	250926	252161	-	conserved hypothetical protein	identified by match to protein family HMM PF06245	gene	gene248	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0249
THEYE_A0250	THEYE_A0250		THEYE_A0250	252230	252892	+	hypothetical protein	identified by glimmer%3B putative	gene	gene249	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0250
THEYE_A0251	THEYE_A0251		THEYE_A0251	253055	255505	+	ClpC ATPase	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728	gene	gene250	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0251
THEYE_A0252	THEYE_A0252		THEYE_A0252	255514	256038	+	thiol-disulfide oxidoreductase ResA	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene251	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0252
THEYE_A0253	THEYE_A0253		THEYE_A0253	256038	256568	+	conserved hypothetical protein		gene	gene252	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0253
THEYE_A0254	THEYE_A0254	tig	tig	256624	257859	+	trigger factor	identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115	gene	gene253	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0254
THEYE_A0255	THEYE_A0255	clpP	clpP	257856	258443	+	ATP-dependent Clp protease%2C proteolytic subunit ClpP	identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493	gene	gene254	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0255
THEYE_A0256	THEYE_A0256	clpX	clpX	258453	259682	+	ATP-dependent Clp protease%2C ATP-binding subunit ClpX	identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382	gene	gene255	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0256
THEYE_A0257	THEYE_A0257		THEYE_A0257	259675	260049	+	conserved hypothetical protein		gene	gene256	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0257
THEYE_A0258	THEYE_A0258		THEYE_A0258	260099	260656	+	conserved hypothetical protein	identified by match to protein family HMM PF03692	gene	gene257	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0258
THEYE_A0259	THEYE_A0259		THEYE_A0259	260704	261678	+	AdnA	identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene258	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0259
THEYE_A0260	THEYE_A0260		THEYE_A0260	262508	263257	+	tetratricopeptide repeat domain protein		gene	gene260	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0260
THEYE_A0261	THEYE_A0261		THEYE_A0261	262180	262255	+	Small nucleolar RNA SNORD19		snoRNA	gene259	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0261
THEYE_A0262	THEYE_A0262		THEYE_A0262	263254	264345	+	sensory box histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229	gene	gene261	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0262
THEYE_A0263	THEYE_A0263		THEYE_A0263	264342	265616	+	transcriptional activator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene262	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0263
THEYE_A0264	THEYE_A0264	flgB	flgB	265756	266091	+	flagellar basal-body rod protein FlgB	identified by match to protein family HMM TIGR01396	gene	gene263	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0264
THEYE_A0265	THEYE_A0265	flgC	flgC	266091	266498	+	flagellar basal-body rod protein FlgC	identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR01395	gene	gene264	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0265
THEYE_A0266	THEYE_A0266	fliE	fliE	266512	266805	+	flagellar hook-basal body complex protein (FliE)	identified by match to protein family HMM PF02049%3B match to protein family HMM TIGR00205	gene	gene265	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0266
THEYE_A0267	THEYE_A0267	fliF	fliF	266812	268329	+	flagellar M-ring protein FliF	identified by match to protein family HMM PF01514%3B match to protein family HMM PF08345%3B match to protein family HMM TIGR00206	gene	gene266	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0267
THEYE_A0268	THEYE_A0268	fliG	fliG	268368	269348	+	flagellar motor switch protein FliG	identified by match to protein family HMM PF01706%3B match to protein family HMM TIGR00207	gene	gene267	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0268
THEYE_A0269	THEYE_A0269	fliH	fliH	269338	269991	+	flagellar assembly protein FliH	identified by match to protein family HMM PF02108	gene	gene268	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0269
THEYE_A0270	THEYE_A0270	fliI	fliI	269957	271270	+	flagellar protein export ATPase FliI	identified by match to protein family HMM PF00006%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01026%3B match to protein family HMM TIGR02545%3B match to protein family HMM TIGR03496	gene	gene269	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0270
THEYE_A0271	THEYE_A0271		THEYE_A0271	271270	271689	+	conserved hypothetical protein		gene	gene270	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0271
THEYE_A0272	THEYE_A0272		THEYE_A0272	271689	272141	+	conserved hypothetical protein		gene	gene271	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0272
THEYE_A0273	THEYE_A0273		THEYE_A0273	272261	273292	+	flagellar hook-length control protein%2C putative	identified by match to protein family HMM PF02120	gene	gene272	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0273
THEYE_A0274	THEYE_A0274	flgD	flgD	273302	273715	+	flagellar hook capping protein	identified by match to protein family HMM PF03963	gene	gene273	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0274
THEYE_A0275	THEYE_A0275		THEYE_A0275	273727	275031	+	flagellar hook protein FlgE	identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM PF07559	gene	gene274	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0275
THEYE_A0276	THEYE_A0276	tyrS	tyrS	275258	276472	-	tyrosyl-tRNA synthetase	identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234	gene	gene275	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0276
THEYE_A0277	THEYE_A0277	panB	panB	276484	277278	-	3-methyl-2-oxobutanoate hydroxymethyltransferase	identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222	gene	gene276	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0277
THEYE_A0278	THEYE_A0278	recJ	recJ	277275	278948	-	single-stranded-DNA-specific exonuclease RecJ	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644	gene	gene277	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0278
THEYE_A0279	THEYE_A0279	secF	secF	278950	279855	-	protein-export membrane protein SecF	identified by match to protein family HMM PF02355%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966	gene	gene278	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0279
THEYE_A0280	THEYE_A0280	secD	secD	279852	281474	-	protein-export membrane protein SecD	identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129	gene	gene279	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0280
THEYE_A0281	THEYE_A0281	yajC	yajC	281484	281834	-	preprotein translocase%2C YajC subunit	identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739	gene	gene280	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0281
THEYE_A0282	THEYE_A0282		THEYE_A0282	281930	282733	-	metal dependent hydrolase	identified by match to protein family HMM PF00753	gene	gene281	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0282
THEYE_A0283	THEYE_A0283		THEYE_A0283	282854	283249	-	membrane protein	identified by match to protein family HMM PF02656	gene	gene282	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0283
THEYE_A0284	THEYE_A0284		THEYE_A0284	283602	283868	-	PZ12b	identified by match to protein family HMM TIGR02385	gene	gene283	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0284
THEYE_A0285	THEYE_A0285		THEYE_A0285	283875	284096	-	DNA-damage-inducible protein J%2C putative	identified by match to protein family HMM PF04221	gene	gene284	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0285
THEYE_A0286	THEYE_A0286		THEYE_A0286	284165	285193	-	exonuclease sbcc%2C putative	identified by match to protein family HMM PF01381	gene	gene285	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0286
THEYE_A0287	THEYE_A0287		THEYE_A0287	285341	285910	+	hypothetical protein	identified by glimmer%3B putative	gene	gene286	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0287
THEYE_A0288	THEYE_A0288		THEYE_A0288	285957	286124	+	ribbon-helix-helix protein%2C CopG family	identified by match to protein family HMM PF01402	gene	gene287	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0288
THEYE_A0289	THEYE_A0289		THEYE_A0289	286147	287361	+	pyocin R2_PP%2C TraC domain protein	identified by match to protein family HMM PF05272	gene	gene288	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0289
THEYE_A0290	THEYE_A0290		THEYE_A0290	287316	287435	+	hypothetical protein	identified by glimmer%3B putative	gene	gene289	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0290
THEYE_A0291	THEYE_A0291		THEYE_A0291	288209	289819	+	putative transposase DNA-binding domain family	identified by match to protein family HMM PF07282%3B match to protein family HMM TIGR01765%3B match to protein family HMM TIGR01766	gene	gene290	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0291
THEYE_A0292	THEYE_A0292		THEYE_A0292	290172	295703	+	hypothetical protein	identified by glimmer%3B putative	gene	gene291	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0292
THEYE_A0293	THEYE_A0293		THEYE_A0293	296248	296655	+	hypothetical protein	identified by glimmer%3B putative	gene	gene292	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0293
THEYE_A0294	THEYE_A0294		THEYE_A0294	296694	296876	+	hypothetical protein	identified by glimmer%3B putative	gene	gene293	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0294
THEYE_A0295	THEYE_A0295		THEYE_A0295	296878	297063	+	hypothetical protein	identified by glimmer%3B putative	gene	gene294	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0295
THEYE_A0296	THEYE_A0296		THEYE_A0296	297070	298782	+	putative conjugative transfer protein TraD		gene	gene295	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0296
THEYE_A0297	THEYE_A0297		THEYE_A0297	298852	299208	+	hypothetical protein	identified by glimmer%3B putative	gene	gene296	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0297
THEYE_A0298	THEYE_A0298		THEYE_A0298	299189	299467	+	hypothetical protein	identified by glimmer%3B putative	gene	gene297	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0298
THEYE_A0299	THEYE_A0299		THEYE_A0299	299464	299781	+	hypothetical protein	identified by glimmer%3B putative	gene	gene298	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0299
THEYE_A0300	THEYE_A0300		THEYE_A0300	299778	299984	+	hypothetical protein	identified by glimmer%3B putative	gene	gene299	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0300
THEYE_A0301	THEYE_A0301		THEYE_A0301	300049	300216	+	cytoChrome c oxidase%2C subunit II%2C putative		gene	gene300	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0301
THEYE_A0302	THEYE_A0302		THEYE_A0302	300213	300398	+	hypothetical protein	identified by glimmer%3B putative	gene	gene301	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0302
THEYE_A0303	THEYE_A0303		THEYE_A0303	300415	300711	+	hypothetical protein	identified by glimmer%3B putative	gene	gene302	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0303
THEYE_A0304	THEYE_A0304		THEYE_A0304	300770	302029	+	hypothetical protein	identified by glimmer%3B putative	gene	gene303	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0304
THEYE_A0305	THEYE_A0305		THEYE_A0305	302034	302984	+	hypothetical protein	identified by glimmer%3B putative	gene	gene304	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0305
THEYE_A0306	THEYE_A0306		THEYE_A0306	303396	304010	+	molybdenum-pterin binding domain protein/site-specific recombinase%2C phage integrase family	identified by match to protein family HMM PF00589	gene	gene305	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0306
THEYE_A0307	THEYE_A0307		THEYE_A0307	304038	304385	+	conserved hypothetical protein		gene	gene306	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0307
THEYE_A0308	THEYE_A0308		THEYE_A0308	304405	304707	+	hypothetical protein	identified by glimmer%3B putative	gene	gene307	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0308
THEYE_A0309	THEYE_A0309		THEYE_A0309	304704	304913	-	conserved hypothetical protein	identified by match to protein family HMM PF03681	gene	gene308	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0309
THEYE_A0310	THEYE_A0310		THEYE_A0310	304906	305172	-	conserved hypothetical protein		gene	gene309	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0310
THEYE_A0311	THEYE_A0311		THEYE_A0311	305256	305723	+	hypothetical protein	identified by glimmer%3B putative	gene	gene310	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0311
THEYE_A0312	THEYE_A0312		THEYE_A0312	305720	306049	+	hypothetical protein	identified by glimmer%3B putative	gene	gene311	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0312
THEYE_A0313	THEYE_A0313		THEYE_A0313	306114	306353	+	hypothetical protein	identified by glimmer%3B putative	gene	gene312	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0313
THEYE_A0314	THEYE_A0314		THEYE_A0314	306354	306587	+	hypothetical protein	identified by match to protein family HMM PF00376%3B match to protein family HMM PF05930%3B match to protein family HMM TIGR01764	gene	gene313	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0314
THEYE_A0315	THEYE_A0315		THEYE_A0315	306672	307709	+	site specific recombinase	identified by match to protein family HMM PF00589	gene	gene314	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0315
THEYE_A0316	THEYE_A0316		THEYE_A0316	307739	307814	-	tRNA-Ala		tRNA	gene315	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0316
THEYE_A0317	THEYE_A0317		THEYE_A0317	307921	309234	+	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene316	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0317
THEYE_A0318	THEYE_A0318		THEYE_A0318	309231	309821	+	conserved hypothetical protein		gene	gene317	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0318
THEYE_A0319	THEYE_A0319	accA	accA	309801	310787	-	acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit	identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513	gene	gene318	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0319
THEYE_A0320	THEYE_A0320		THEYE_A0320	310784	314191	-	DNA polymerase III alpha subunit	identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594	gene	gene319	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0320
THEYE_A0321	THEYE_A0321		THEYE_A0321	314220	315506	-	PDZ domain protein	identified by match to protein family HMM PF04459	gene	gene320	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0321
THEYE_A0322	THEYE_A0322		THEYE_A0322	315496	316035	-	phosphatidylglycerophosphate synthase	identified by match to protein family HMM PF01066	gene	gene321	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0322
THEYE_A0323	THEYE_A0323		THEYE_A0323	316046	317068	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene322	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0323
THEYE_A0324	THEYE_A0324	rpe	rpe	317058	317717	-	ribulose-phosphate 3-epimerase	identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163	gene	gene323	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0324
THEYE_A0325	THEYE_A0325		THEYE_A0325	317714	318211	-	probable serine/threonine protein kinase	identified by match to protein family HMM PF03793	gene	gene324	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0325
THEYE_A0326	THEYE_A0326		THEYE_A0326	318208	319533	-	Sun protein	identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189	gene	gene325	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0326
THEYE_A0327	THEYE_A0327		THEYE_A0327	319506	320045	-	protein of unknown function	identified by match to protein family HMM PF01976	gene	gene326	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0327
THEYE_A0328	THEYE_A0328	fmt	fmt	320020	320946	-	methionyl-tRNA formyltransferase	identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460	gene	gene327	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0328
THEYE_A0329	THEYE_A0329	def	def	320955	321452	-	peptide deformylase	identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079	gene	gene328	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0329
THEYE_A0330	THEYE_A0330		THEYE_A0330	321465	322415	-	mce-related protein	identified by match to protein family HMM PF02470	gene	gene329	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0330
THEYE_A0331	THEYE_A0331		THEYE_A0331	322408	322887	-	flavodoxin family protein	identified by match to protein family HMM PF00258%3B match to protein family HMM PF03358	gene	gene330	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0331
THEYE_A0332	THEYE_A0332		THEYE_A0332	323013	324557	+	YjeF family protein	identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197	gene	gene331	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0332
THEYE_A0333	THEYE_A0333		THEYE_A0333	324535	325320	+	RNA methyltransferase%2C TrmH family	identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032	gene	gene332	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0333
THEYE_A0334	THEYE_A0334		THEYE_A0334	325718	326041	+	DNA binding protein	identified by match to protein family HMM PF01381	gene	gene333	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0334
THEYE_A0335	THEYE_A0335		THEYE_A0335	326096	327307	+	pilin inverting protein%2C putative	identified by match to protein family HMM PF01548%3B match to protein family HMM PF02371	gene	gene334	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0335
THEYE_A0336	THEYE_A0336	rplI	rplI	327699	328142	+	ribosomal protein L9	identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158	gene	gene335	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0336
THEYE_A0337	THEYE_A0337	dnaB	dnaB	328142	329524	+	replicative DNA helicase	identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665	gene	gene336	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0337
THEYE_A0338	THEYE_A0338		THEYE_A0338	329525	330334	+	conserved protein	identified by match to protein family HMM PF01875	gene	gene337	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0338
THEYE_A0339	THEYE_A0339		THEYE_A0339	330324	330926	+	molybdopterin-guanine dinucleotide biosynthesis protein A		gene	gene338	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0339
THEYE_A0340	THEYE_A0340		THEYE_A0340	330914	331102	+	conserved domain protein	identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411	gene	gene339	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0340
THEYE_A0341	THEYE_A0341	alr	alr	331105	332196	+	alanine racemase	identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492	gene	gene340	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0341
THEYE_A0342	THEYE_A0342		THEYE_A0342	332193	333383	+	aspartate aminotransferase	identified by match to protein family HMM PF00155	gene	gene341	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0342
THEYE_A0343	THEYE_A0343	era	era	333380	334249	+	GTP-binding protein Era	identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436%3B match to protein family HMM TIGR00650	gene	gene342	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0343
THEYE_A0344	THEYE_A0344		THEYE_A0344	334251	334703	+	conserved hypothetical protein	identified by match to protein family HMM PF02577	gene	gene343	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0344
THEYE_A0345	THEYE_A0345	recO	recO	334707	335459	+	DNA repair protein RecO	identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613	gene	gene344	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0345
THEYE_A0346	THEYE_A0346		THEYE_A0346	335426	335629	+	hypothetical protein	identified by glimmer%3B putative	gene	gene345	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0346
THEYE_A0347	THEYE_A0347		THEYE_A0347	335759	335923	+	conserved hypothetical protein		gene	gene346	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0347
THEYE_A0348	THEYE_A0348		THEYE_A0348	335924	336514	+	conserved hypothetical protein	identified by match to protein family HMM PF01914%3B match to protein family HMM TIGR00427	gene	gene347	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0348
THEYE_A0349	THEYE_A0349		THEYE_A0349	336515	337015	+	cob(I)alamin adenosyltransferase	identified by match to protein family HMM PF02572	gene	gene348	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0349
THEYE_A0350	THEYE_A0350		THEYE_A0350	337015	337653	+	phosphoglycerate mutase	identified by match to protein family HMM PF00300	gene	gene349	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0350
THEYE_A0351	THEYE_A0351	lpxK	lpxK	337640	338608	+	tetraacyldisaccharide 4'-kinase	identified by match to protein family HMM PF02606%3B match to protein family HMM TIGR00682	gene	gene350	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0351
THEYE_A0352	THEYE_A0352		THEYE_A0352	338743	339132	+	conserved hypothetical protein		gene	gene351	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0352
THEYE_A0353	THEYE_A0353		THEYE_A0353	339316	339906	+	prepilin-type N-terminal cleavage/methylation domain protein	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene352	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0353
THEYE_A0354	THEYE_A0354		THEYE_A0354	340008	340616	+	prepilin-type N-terminal cleavage/methylation domain protein	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene353	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0354
THEYE_A0355	THEYE_A0355		THEYE_A0355	340633	342504	+	O-Antigen Polymerase family	identified by match to protein family HMM PF04932	gene	gene354	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0355
THEYE_A0356	THEYE_A0356		THEYE_A0356	342537	342941	-	hypothetical protein	identified by glimmer%3B putative	gene	gene355	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0356
THEYE_A0357	THEYE_A0357		THEYE_A0357	342922	343332	-	nucleotidyltransferase domain%2C putative	identified by match to protein family HMM PF01909	gene	gene356	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0357
THEYE_A0358	THEYE_A0358		THEYE_A0358	343638	344576	+	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene357	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0358
THEYE_A0359	THEYE_A0359		THEYE_A0359	344550	345029	-	phosphodiesterase	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040	gene	gene358	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0359
THEYE_A0360	THEYE_A0360	scpA	scpA	345007	345732	-	segregation and condensation protein A	identified by match to protein family HMM PF02616	gene	gene359	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0360
THEYE_A0361	THEYE_A0361		THEYE_A0361	345750	346985	+	molybdenum cofactor biosynthesis protein	identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177	gene	gene360	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0361
THEYE_A0362	THEYE_A0362		THEYE_A0362	346982	347848	-	NADH dehydrogenase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF05368%3B match to protein family HMM PF07993	gene	gene361	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0362
THEYE_A0363	THEYE_A0363		THEYE_A0363	347885	348364	-	heat shock protein%2C Hsp20 family	identified by match to protein family HMM PF00011%3B match to protein family HMM PF04969	gene	gene362	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0363
THEYE_A0364	THEYE_A0364	selD	selD	348473	349327	-	selenide%2C water dikinase	identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR00476	gene	gene363	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0364
THEYE_A0365	THEYE_A0365		THEYE_A0365	349604	350599	+	conserved hypothetical protein	identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247	gene	gene364	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0365
THEYE_A0366	THEYE_A0366	ispG	ispG	350592	351641	+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612	gene	gene365	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0366
THEYE_A0367	THEYE_A0367	rpmE	rpmE	351707	351907	+	ribosomal protein L31	identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105	gene	gene366	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0367
THEYE_A0368	THEYE_A0368		THEYE_A0368	351992	352882	+	conserved protein	identified by match to protein family HMM PF07136	gene	gene367	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0368
THEYE_A0369	THEYE_A0369	prfA	prfA	352875	353936	+	peptide chain release factor 1	identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019	gene	gene368	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0369
THEYE_A0370	THEYE_A0370		THEYE_A0370	353933	354772	+	HemK family protein	identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03387	gene	gene369	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0370
THEYE_A0371	THEYE_A0371		THEYE_A0371	354779	355312	+	peptidase%2C C39 family	identified by match to protein family HMM PF03412	gene	gene370	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0371
THEYE_A0372	THEYE_A0372		THEYE_A0372	355327	356562	+	glucose-1-phosphate adenylyltransferase	identified by match to protein family HMM PF00483	gene	gene371	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0372
THEYE_A0373	THEYE_A0373		THEYE_A0373	356531	358711	+	sensory box histidine kinase%2C putative	identified by match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF07730%3B match to protein family HMM PF08447%3B match to protein family HMM TIGR00229	gene	gene372	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0373
THEYE_A0374	THEYE_A0374		THEYE_A0374	358704	359345	+	response regulator UvrY	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196%3B match to protein family HMM PF08281	gene	gene373	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0374
THEYE_A0375	THEYE_A0375		THEYE_A0375	359323	360474	-	putative transport protein	identified by match to protein family HMM PF07690	gene	gene374	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0375
THEYE_A0376	THEYE_A0376	glpX	glpX	360575	361540	-	fructose-1%2C6-bisphosphatase%2C class II	identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330	gene	gene375	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0376
THEYE_A0377	THEYE_A0377		THEYE_A0377	361826	362737	-	conserved hypothetical protein		gene	gene376	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0377
THEYE_A0378	THEYE_A0378		THEYE_A0378	362721	363737	-	modification methylase BamHI	identified by match to protein family HMM PF01170%3B match to protein family HMM PF01555	gene	gene377	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0378
THEYE_A0379	THEYE_A0379		THEYE_A0379	363765	364739	-	putative type II restriction enzyme		gene	gene378	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0379
THEYE_A0380	THEYE_A0380		THEYE_A0380	364739	366166	-	DNA methyltransferase C1		gene	gene379	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0380
THEYE_A0381	THEYE_A0381		THEYE_A0381	366163	366837	-	DNA repair protein	identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608	gene	gene380	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0381
THEYE_A0382	THEYE_A0382	metG	metG	366834	368762	-	methionyl-tRNA synthetase	identified by match to protein family HMM PF01406%3B match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399	gene	gene381	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0382
THEYE_A0383	THEYE_A0383		THEYE_A0383	368749	369513	-	Tpl protein	identified by match to protein family HMM PF04468	gene	gene382	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0383
THEYE_A0384	THEYE_A0384		THEYE_A0384	369533	370492	-	DNA polymerase III%2C subunits gamma and tau		gene	gene383	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0384
THEYE_A0385	THEYE_A0385	tmk	tmk	370482	371111	-	thymidylate kinase	identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041	gene	gene384	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0385
THEYE_A0386	THEYE_A0386		THEYE_A0386	371104	372099	-	conserved hypothetical protein		gene	gene385	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0386
THEYE_A0387	THEYE_A0387		THEYE_A0387	372105	372320	-	hypothetical protein	identified by glimmer%3B putative	gene	gene386	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0387
THEYE_A0388	THEYE_A0388		THEYE_A0388	372510	376685	-	(R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein	identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241	gene	gene387	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0388
THEYE_A0389	THEYE_A0389		THEYE_A0389	376669	378114	-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	identified by match to protein family HMM PF01977%3B match to protein family HMM TIGR00148	gene	gene388	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0389
THEYE_A0390	THEYE_A0390		THEYE_A0390	378311	379735	+	methyl-accepting chemotaxis protein%2C putative	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene389	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0390
THEYE_A0391	THEYE_A0391		THEYE_A0391	379768	381996	-	chemotaxis protein histidine kinase CheA%2C putative	identified by match to protein family HMM PF00072%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518	gene	gene390	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0391
THEYE_A0392	THEYE_A0392		THEYE_A0392	381986	382396	-	chemotaxis protein CheW		gene	gene391	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0392
THEYE_A0393	THEYE_A0393		THEYE_A0393	382381	382746	-	CheY subfamily	identified by match to protein family HMM PF00072	gene	gene392	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0393
THEYE_A0394	THEYE_A0394		THEYE_A0394	382775	384034	-	transcriptional regulatory protein	identified by match to protein family HMM PF00072	gene	gene393	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0394
THEYE_A0395	THEYE_A0395		THEYE_A0395	384045	385175	-	methyl-accepting chemotaxis protein%2C putative	identified by match to protein family HMM PF00672	gene	gene394	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0395
THEYE_A0396	THEYE_A0396		THEYE_A0396	385176	385730	-	hypothetical protein	identified by glimmer%3B putative	gene	gene395	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0396
THEYE_A0397	THEYE_A0397	thiE1	thiE1	385735	386337	-	thiamine-phosphate pyrophosphorylase	identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693	gene	gene396	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0397
THEYE_A0398	THEYE_A0398	accC1	accC1	386324	387679	-	acetyl-CoA carboxylase%2C biotin carboxylase	identified by match to protein family HMM PF00289%3B match to protein family HMM PF02222%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR00514	gene	gene397	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0398
THEYE_A0399	THEYE_A0399	accB	accB	387682	388125	-	acetyl-CoA carboxylase%2C biotin carboxyl carrier protein	identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531	gene	gene398	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0399
THEYE_A0400	THEYE_A0400	efp	efp	388129	388692	-	translation elongation factor P	identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038	gene	gene399	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0400
THEYE_A0401	THEYE_A0401		THEYE_A0401	388705	389769	-	aminopeptidase P	identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321	gene	gene400	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0401
THEYE_A0402	THEYE_A0402	coaBC	coaBC	389759	390958	-	phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase	identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521	gene	gene401	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0402
THEYE_A0403	THEYE_A0403		THEYE_A0403	390977	391393	-	hyaluronan receptor rhamm	identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690	gene	gene402	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0403
THEYE_A0404	THEYE_A0404		THEYE_A0404	391407	392021	-	guanylate kinase	identified by match to protein family HMM PF00625	gene	gene403	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0404
THEYE_A0405	THEYE_A0405		THEYE_A0405	392008	392265	-	conserved hypothetical protein	identified by match to protein family HMM PF04025	gene	gene404	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0405
THEYE_A0406	THEYE_A0406		THEYE_A0406	392268	393119	-	conserved hypothetical protein	identified by match to protein family HMM PF03755%3B match to protein family HMM TIGR00255	gene	gene405	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0406
THEYE_A0407	THEYE_A0407		THEYE_A0407	393116	393379	-	conserved hypothetical protein	identified by match to protein family HMM PF02594	gene	gene406	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0407
THEYE_A0408	THEYE_A0408		THEYE_A0408	393354	394238	-	PAP2 superfamily protein	identified by match to protein family HMM PF01569	gene	gene407	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0408
THEYE_A0409	THEYE_A0409		THEYE_A0409	394238	394684	-	conserved hypothetical protein		gene	gene408	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0409
THEYE_A0410	THEYE_A0410		THEYE_A0410	395141	395980	-	methyltransferase%2C FkbM family protein	identified by match to protein family HMM TIGR01444	gene	gene409	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0410
THEYE_A0411	THEYE_A0411		THEYE_A0411	395986	396690	-	glycosyl transferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene410	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0411
THEYE_A0412	THEYE_A0412		THEYE_A0412	396687	397715	-	ADP-heptose:LPS heptosyltransferase II%2C putative	identified by match to protein family HMM PF01075	gene	gene411	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0412
THEYE_A0413	THEYE_A0413		THEYE_A0413	397719	398333	-	hypothetical protein	identified by glimmer%3B putative	gene	gene412	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0413
THEYE_A0414	THEYE_A0414		THEYE_A0414	398320	400209	-	conserved hypothetical protein		gene	gene413	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0414
THEYE_A0415	THEYE_A0415		THEYE_A0415	400281	400715	-	prokaryotic N-terminal methylation motif domain protein	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene414	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0415
THEYE_A0416	THEYE_A0416		THEYE_A0416	401108	401938	-	hypothetical protein	identified by glimmer%3B putative	gene	gene415	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0416
THEYE_A0417	THEYE_A0417		THEYE_A0417	401935	402579	-	cell cycle transcriptional regulator CtrA	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene416	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0417
THEYE_A0418	THEYE_A0418		THEYE_A0418	402579	404570	-	PilQ	identified by match to protein family HMM PF00263%3B match to protein family HMM PF03958%3B match to protein family HMM PF07660%3B match to protein family HMM TIGR02515	gene	gene417	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0418
THEYE_A0419	THEYE_A0419		THEYE_A0419	404567	405049	-	hypothetical protein	identified by glimmer%3B putative	gene	gene418	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0419
THEYE_A0420	THEYE_A0420		THEYE_A0420	405046	405633	-	putative fimbrial assembly protein PilO-like protein		gene	gene419	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0420
THEYE_A0421	THEYE_A0421		THEYE_A0421	405636	406190	-	probable fimbrial type-4 assembly membrane transmembrane protein%2C putative	identified by match to protein family HMM PF05137	gene	gene420	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0421
THEYE_A0422	THEYE_A0422		THEYE_A0422	406187	407125	-	hypothetical protein	identified by glimmer%3B putative	gene	gene421	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0422
THEYE_A0423	THEYE_A0423	aroE	aroE	407147	407974	-	shikimate 5-dehydrogenase	identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501%3B match to protein family HMM TIGR00507	gene	gene422	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0423
THEYE_A0424	THEYE_A0424		THEYE_A0424	408455	409768	+	VI polysaccharide biosynthesis protein VipA/tviB	identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene423	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0424
THEYE_A0425	THEYE_A0425		THEYE_A0425	409763	410857	-	glycosyl transferase%2C group 1	identified by match to protein family HMM PF00534	gene	gene424	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0425
THEYE_A0426	THEYE_A0426		THEYE_A0426	410858	411904	-	glycosyl transferase%2C family 9	identified by match to protein family HMM PF01075	gene	gene425	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0426
THEYE_A0427	THEYE_A0427		THEYE_A0427	411901	413163	-	O-Antigen Polymerase family	identified by match to protein family HMM PF04932	gene	gene426	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0427
THEYE_A0428	THEYE_A0428		THEYE_A0428	413150	414289	-	glycosyl transferase%2C family 9	identified by match to protein family HMM PF01075	gene	gene427	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0428
THEYE_A0429	THEYE_A0429		THEYE_A0429	414286	415500	-	glycosyl transferase%2C group 1	identified by match to protein family HMM PF00534	gene	gene428	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0429
THEYE_A0430	THEYE_A0430		THEYE_A0430	415497	416612	-	glycosyl transferase%2C family 9	identified by match to protein family HMM PF01075	gene	gene429	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0430
THEYE_A0431	THEYE_A0431		THEYE_A0431	416719	417165	-	nucleotidyltransferase domain protein	identified by match to protein family HMM PF01909	gene	gene430	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0431
THEYE_A0432	THEYE_A0432	proB	proB	417571	418668	-	glutamate 5-kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027	gene	gene431	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0432
THEYE_A0433	THEYE_A0433		THEYE_A0433	418653	419666	-	GTP-binding protein Obg/CgtA	identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729	gene	gene432	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0433
THEYE_A0434	THEYE_A0434	rpmA	rpmA	419702	419971	-	ribosomal protein L27	identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062	gene	gene433	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0434
THEYE_A0435	THEYE_A0435	rplU	rplU	419974	420288	-	ribosomal protein L21	identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061	gene	gene434	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0435
THEYE_A0436	THEYE_A0436	hisG	hisG	420300	421178	-	ATP phosphoribosyltransferase	identified by match to protein family HMM PF01634%3B match to protein family HMM PF08029%3B match to protein family HMM TIGR00070%3B match to protein family HMM TIGR03455	gene	gene435	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0436
THEYE_A0437	THEYE_A0437		THEYE_A0437	421618	421706	-	tRNA-Leu		tRNA	gene436	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0437
THEYE_A0438	THEYE_A0438		THEYE_A0438	421938	423551	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene437	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0438
THEYE_A0439	THEYE_A0439		THEYE_A0439	423708	425957	+	dead/deah box helicase domain protein	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271	gene	gene438	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0439
THEYE_A0440	THEYE_A0440		THEYE_A0440	426512	428131	+	methyl-accepting chemotaxis transducer	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene439	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0440
THEYE_A0442	THEYE_A0442	thiS	thiS	428347	428544	+	thiamine biosynthesis protein ThiS	identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683	gene	gene440	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0442
THEYE_A0443	THEYE_A0443	thiG	thiG	428546	429319	+	thiazole biosynthesis protein ThiG	identified by match to protein family HMM PF05690	gene	gene441	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0443
THEYE_A0444	THEYE_A0444	thiE2	thiE2	429316	429936	+	thiamine-phosphate pyrophosphorylase	identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693	gene	gene442	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0444
THEYE_A0445	THEYE_A0445	thiC	thiC	429933	431213	+	thiamine biosynthesis protein ThiC	identified by match to protein family HMM PF01964%3B match to protein family HMM TIGR00190	gene	gene443	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0445
THEYE_A0446	THEYE_A0446		THEYE_A0446	431193	432161	-	oxidoreductase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF07992	gene	gene444	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0446
THEYE_A0447	THEYE_A0447		THEYE_A0447	432569	433129	+	conserved hypothetical protein		gene	gene445	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0447
THEYE_A0448	THEYE_A0448		THEYE_A0448	433126	434841	+	NAD+ synthetase	identified by match to protein family HMM PF00795%3B match to protein family HMM PF02540%3B match to protein family HMM TIGR00552	gene	gene446	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0448
THEYE_A0449	THEYE_A0449		THEYE_A0449	434843	436459	+	modification methylase MjaII		gene	gene447	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0449
THEYE_A0450	THEYE_A0450		THEYE_A0450	436462	437235	+	type II restriction endonuclease TdeIII		gene	gene448	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0450
THEYE_A0451	THEYE_A0451		THEYE_A0451	437245	438096	+	DNA methylase	identified by match to protein family HMM PF01555	gene	gene449	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0451
THEYE_A0452	THEYE_A0452		THEYE_A0452	438080	439147	+	conserved hypothetical protein		gene	gene450	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0452
THEYE_A0453	THEYE_A0453		THEYE_A0453	439157	439423	+	hypothetical protein	identified by glimmer%3B putative	gene	gene451	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0453
THEYE_A0454	THEYE_A0454		THEYE_A0454	439424	440254	+	conserved hypothetical protein	identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096	gene	gene452	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0454
THEYE_A0455	THEYE_A0455		THEYE_A0455	440254	441261	+	sorbitol dehydrogenase	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene453	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0455
THEYE_A0456	THEYE_A0456		THEYE_A0456	441258	442100	+	fumarate hydratase%2C subunit alpha	identified by match to protein family HMM PF05681%3B match to protein family HMM TIGR00722	gene	gene454	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0456
THEYE_A0457	THEYE_A0457		THEYE_A0457	442097	442648	+	hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily	identified by match to protein family HMM PF05683%3B match to protein family HMM TIGR00723	gene	gene455	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0457
THEYE_A0458	THEYE_A0458		THEYE_A0458	442687	443931	-	tRNA nucleotidyltransferase/poly(A) polymerase	identified by match to protein family HMM PF01743	gene	gene456	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0458
THEYE_A0459	THEYE_A0459	dtd	dtd	443935	444375	-	D-tyrosyl-tRNA(Tyr) deacylase	identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256	gene	gene457	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0459
THEYE_A0460	THEYE_A0460		THEYE_A0460	444397	445461	+	response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF01966	gene	gene458	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0460
THEYE_A0461	THEYE_A0461	panC	panC	445465	446307	-	pantoate--beta-alanine ligase	identified by match to protein family HMM PF02569%3B match to protein family HMM TIGR00018%3B match to protein family HMM TIGR00125	gene	gene459	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0461
THEYE_A0462	THEYE_A0462		THEYE_A0462	446366	447073	+	conserved hypothetical protein	identified by match to protein family HMM PF02698	gene	gene460	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0462
THEYE_A0463	THEYE_A0463		THEYE_A0463	447083	448153	-	undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase	identified by match to protein family HMM PF00953	gene	gene461	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0463
THEYE_A0464	THEYE_A0464		THEYE_A0464	448523	449101	+	transcriptional regulator%2C MarR family	identified by match to protein family HMM PF01047	gene	gene462	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0464
THEYE_A0465	THEYE_A0465		THEYE_A0465	449089	449598	+	transcription termination factor NusG domain protein	identified by match to protein family HMM PF02357	gene	gene463	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0465
THEYE_A0466	THEYE_A0466		THEYE_A0466	449883	450101	+	conserved hypothetical protein	identified by match to protein family HMM PF03681	gene	gene464	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0466
THEYE_A0467	THEYE_A0467		THEYE_A0467	450111	450320	+	conserved domain protein	identified by match to protein family HMM PF07927	gene	gene465	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0467
THEYE_A0468	THEYE_A0468	galE	galE	450317	451303	+	UDP-glucose 4-epimerase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179	gene	gene466	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0468
THEYE_A0469	THEYE_A0469	gmd	gmd	451665	452819	+	GDP-mannose 4%2C6-dehydratase	identified by match to protein family HMM PF01370%3B match to protein family HMM TIGR01472	gene	gene467	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0469
THEYE_A0470	THEYE_A0470		THEYE_A0470	452830	453243	+	hypothetical protein	identified by glimmer%3B putative	gene	gene468	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0470
THEYE_A0471	THEYE_A0471		THEYE_A0471	453391	454590	+	GDP-L-fucose synthetase	identified by match to protein family HMM PF01370	gene	gene469	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0471
THEYE_A0472	THEYE_A0472		THEYE_A0472	454806	455753	+	NAD-dependent epimerase/dehydratase family protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993	gene	gene470	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0472
THEYE_A0473	THEYE_A0473		THEYE_A0473	455758	456828	+	putative CDP tyvulose epimerase	identified by match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene471	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0473
THEYE_A0474	THEYE_A0474		THEYE_A0474	456846	457907	+	CDP-tyvelose epimerase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370	gene	gene472	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0474
THEYE_A0475	THEYE_A0475		THEYE_A0475	457916	459352	+	hypothetical protein	identified by glimmer%3B putative	gene	gene473	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0475
THEYE_A0476	THEYE_A0476	cysC	cysC	459339	459941	+	adenylylsulfate kinase	identified by match to protein family HMM PF01583%3B match to protein family HMM TIGR00455	gene	gene474	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0476
THEYE_A0477	THEYE_A0477		THEYE_A0477	459938	461008	+	hypothetical protein	identified by glimmer%3B putative	gene	gene475	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0477
THEYE_A0478	THEYE_A0478		THEYE_A0478	461022	462311	+	hypothetical protein	identified by glimmer%3B putative	gene	gene476	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0478
THEYE_A0479	THEYE_A0479		THEYE_A0479	462322	463359	+	CMP-NeuNAc synthetase	identified by match to protein family HMM PF03102%3B match to protein family HMM PF08666	gene	gene477	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0479
THEYE_A0480	THEYE_A0480		THEYE_A0480	463359	464504	+	UDP-N-acetylglucosamine 2-epimerase	identified by match to protein family HMM PF02350	gene	gene478	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0480
THEYE_A0481	THEYE_A0481		THEYE_A0481	464516	464881	+	CBS domain pair%2C putative	identified by match to protein family HMM PF00571	gene	gene479	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0481
THEYE_A0482	THEYE_A0482		THEYE_A0482	464871	465566	+	N-acylneuraminate cytidylyltransferase	identified by match to protein family HMM PF02348	gene	gene480	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0482
THEYE_A0483	THEYE_A0483		THEYE_A0483	465547	467208	+	hypothetical protein	identified by glimmer%3B putative	gene	gene481	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0483
THEYE_A0484	THEYE_A0484	asnB	asnB	467208	469034	+	asparagine synthase (glutamine-hydrolyzing)	identified by match to protein family HMM PF00310%3B match to protein family HMM PF00733%3B match to protein family HMM TIGR01536	gene	gene482	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0484
THEYE_A0485	THEYE_A0485		THEYE_A0485	469036	469782	+	hypothetical protein	identified by glimmer%3B putative	gene	gene483	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0485
THEYE_A0486	THEYE_A0486		THEYE_A0486	469779	471038	+	glycosyl transferase%2C group 1/2 family protein	identified by match to protein family HMM PF00534	gene	gene484	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0486
THEYE_A0487	THEYE_A0487		THEYE_A0487	471019	471972	+	glycosyltransferase involved in cell wall biogenesis	identified by match to protein family HMM PF00535	gene	gene485	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0487
THEYE_A0488	THEYE_A0488		THEYE_A0488	471962	473407	+	hypothetical protein	identified by glimmer%3B putative	gene	gene486	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0488
THEYE_A0489	THEYE_A0489		THEYE_A0489	473380	475179	+	hypothetical protein	identified by glimmer%3B putative	gene	gene487	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0489
THEYE_A0490	THEYE_A0490		THEYE_A0490	475169	475669	+	hypothetical protein	identified by glimmer%3B putative	gene	gene488	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0490
THEYE_A0491	THEYE_A0491		THEYE_A0491	475939	476637	+	putative methyltransferase	identified by match to protein family HMM PF08241	gene	gene489	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0491
THEYE_A0492	THEYE_A0492		THEYE_A0492	476647	477585	+	putative glycosyl transferase CsbB	identified by match to protein family HMM PF00535	gene	gene490	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0492
THEYE_A0493	THEYE_A0493		THEYE_A0493	477591	478817	+	glycosyltransferase	identified by match to protein family HMM PF00534	gene	gene491	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0493
THEYE_A0494	THEYE_A0494		THEYE_A0494	478834	479922	+	mannosyltransferase%2C putative	identified by match to protein family HMM PF00534	gene	gene492	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0494
THEYE_A0495	THEYE_A0495		THEYE_A0495	479930	480943	+	NDP-sugar dehydratase or epimerase%2C putative	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene493	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0495
THEYE_A0496	THEYE_A0496		THEYE_A0496	480988	483099	+	oxidoreductase	identified by match to protein family HMM PF00107%3B match to protein family HMM PF01408%3B match to protein family HMM PF08240	gene	gene494	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0496
THEYE_A0497	THEYE_A0497		THEYE_A0497	483096	484304	+	lipopolysaccharide biosynthesis protein	identified by match to protein family HMM PF00534	gene	gene495	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0497
THEYE_A0498	THEYE_A0498		THEYE_A0498	484317	485417	+	UDP-glucose 4-epimerase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993	gene	gene496	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0498
THEYE_A0499	THEYE_A0499		THEYE_A0499	485483	486610	+	UDP-N-acetylglucosamine 2-epimerase	identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236	gene	gene497	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0499
THEYE_A0500	THEYE_A0500		THEYE_A0500	486882	487649	+	putative protein	identified by match to protein family HMM PF02706	gene	gene498	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0500
THEYE_A0501	THEYE_A0501		THEYE_A0501	487624	487740	+	hypothetical protein	identified by glimmer%3B putative	gene	gene499	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0501
THEYE_A0502	THEYE_A0502		THEYE_A0502	487733	488275	+	conserved Crenarchaeal protein		gene	gene500	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0502
THEYE_A0504	THEYE_A0504	metE	metE	489113	491350	+	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	identified by match to protein family HMM PF01717%3B match to protein family HMM PF08267%3B match to protein family HMM TIGR01371	gene	gene501	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0504
THEYE_A0505	THEYE_A0505	nrdD	nrdD	491352	495509	+	anaerobic ribonucleoside-triphosphate reductase	identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR02487	gene	gene502	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0505
THEYE_A0506	THEYE_A0506	trpE	trpE	495555	497045	+	anthranilate synthase component I	identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00564	gene	gene503	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0506
THEYE_A0507	THEYE_A0507		THEYE_A0507	497042	497605	+	para-aminobenzoate/anthranilate synthase glutamine amidotransferasecomponent II	identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566	gene	gene504	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0507
THEYE_A0508	THEYE_A0508	trpD	trpD	497602	498612	+	anthranilate phosphoribosyltransferase	identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245	gene	gene505	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0508
THEYE_A0509	THEYE_A0509		THEYE_A0509	498615	499226	+	hypothetical protein	identified by glimmer%3B putative	gene	gene506	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0509
THEYE_A0510	THEYE_A0510		THEYE_A0510	499273	499370	+	tRNA-Sec		tRNA	gene507	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0510
THEYE_A0511	THEYE_A0511		THEYE_A0511	499394	499738	+	conserved hypothetical protein	identified by match to protein family HMM PF04430	gene	gene508	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0511
THEYE_A0512	THEYE_A0512		THEYE_A0512	499757	499936	+	hypothetical protein	identified by glimmer%3B putative	gene	gene509	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0512
THEYE_A0513	THEYE_A0513	fhs	fhs	499965	501734	+	formate--tetrahydrofolate ligase	identified by match to protein family HMM PF01268	gene	gene510	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0513
THEYE_A0514	THEYE_A0514		THEYE_A0514	501948	502547	-	putative protein		gene	gene511	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0514
THEYE_A0515	THEYE_A0515		THEYE_A0515	502549	503325	-	type II restriction enzyme TaqI		gene	gene512	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0515
THEYE_A0516	THEYE_A0516		THEYE_A0516	503322	504731	-	modification methylase TaqI	identified by match to protein family HMM PF02384%3B match to protein family HMM PF07669	gene	gene513	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0516
THEYE_A0517	THEYE_A0517		THEYE_A0517	504910	505494	-	type II restriction enzyme MjaI		gene	gene514	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0517
THEYE_A0518	THEYE_A0518		THEYE_A0518	505496	506836	-	modification methylase MjaI	identified by match to protein family HMM PF01555	gene	gene515	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0518
THEYE_A0519	THEYE_A0519		THEYE_A0519	507063	508820	-	hypothetical protein	identified by glimmer%3B putative	gene	gene516	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0519
THEYE_A0520	THEYE_A0520		THEYE_A0520	508840	509595	-	conserved hypothetical protein		gene	gene517	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0520
THEYE_A0521	THEYE_A0521		THEYE_A0521	509734	510579	-	conserved hypothetical protein		gene	gene518	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0521
THEYE_A0522	THEYE_A0522		THEYE_A0522	510619	510939	-	hypothetical protein	identified by glimmer%3B putative	gene	gene519	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0522
THEYE_A0523	THEYE_A0523		THEYE_A0523	511109	512629	-	conserved hypothetical protein	conserverd within P. aerophilum	gene	gene520	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0523
THEYE_A0524	THEYE_A0524		THEYE_A0524	512763	513488	+	hypothetical protein	identified by glimmer%3B putative	gene	gene521	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0524
THEYE_A0525	THEYE_A0525		THEYE_A0525	513485	516088	+	sodium/potassium-transporting ATPase%2C alpha subunit	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494	gene	gene522	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0525
THEYE_A0526	THEYE_A0526		THEYE_A0526	516199	516744	+	conserved Archaeal protein	identified by match to protein family HMM PF07998	gene	gene523	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0526
THEYE_A0527	THEYE_A0527		THEYE_A0527	516749	517141	+	conserved hypothetical protein	identified by match to protein family HMM PF06935	gene	gene524	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0527
THEYE_A0528	THEYE_A0528		THEYE_A0528	517109	517432	-	hypothetical protein	identified by glimmer%3B putative	gene	gene525	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0528
THEYE_A0529	THEYE_A0529		THEYE_A0529	517429	518310	-	peptidase%2C M28 family	identified by match to protein family HMM PF04389	gene	gene526	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0529
THEYE_A0530	THEYE_A0530		THEYE_A0530	518312	518782	-	conserved Archaeal protein	identified by match to protein family HMM PF06571	gene	gene527	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0530
THEYE_A0531	THEYE_A0531		THEYE_A0531	518905	519342	+	phosphatidylglycerophosphatase A	identified by match to protein family HMM PF04608	gene	gene528	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0531
THEYE_A0532	THEYE_A0532		THEYE_A0532	519350	519910	+	2'-5' RNA ligase	identified by match to protein family HMM PF02834%3B match to protein family HMM TIGR02258	gene	gene529	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0532
THEYE_A0533	THEYE_A0533	recA	recA	519949	520977	+	RecA protein	identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012	gene	gene530	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0533
THEYE_A0534	THEYE_A0534	recX	recX	520958	521458	+	regulatory protein RecX	identified by match to protein family HMM PF02631	gene	gene531	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0534
THEYE_A0535	THEYE_A0535		THEYE_A0535	521455	521790	+	lipoprotein%2C putative		gene	gene532	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0535
THEYE_A0536	THEYE_A0536	alaS	alaS	521794	524421	+	alanyl-tRNA synthetase	identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344	gene	gene533	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0536
THEYE_A0537	THEYE_A0537		THEYE_A0537	524432	524743	+	conserved hypothetical protein		gene	gene534	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0537
THEYE_A0538	THEYE_A0538	selA	selA	524743	526116	+	L-seryl-tRNA selenium transferase	identified by match to protein family HMM PF03841%3B match to protein family HMM TIGR00474	gene	gene535	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0538
THEYE_A0539	THEYE_A0539		THEYE_A0539	526113	527132	+	dNTP triphosphohydrolase	identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR01353	gene	gene536	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0539
THEYE_A0540	THEYE_A0540	acpS	acpS	527129	527470	+	holo-(acyl-carrier-protein) synthase	identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556	gene	gene537	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0540
THEYE_A0541	THEYE_A0541		THEYE_A0541	527535	528011	+	transcription elongation factor GreA	identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462	gene	gene538	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0541
THEYE_A0542	THEYE_A0542		THEYE_A0542	528004	528750	+	dihydroorotate dehydrogenase electron transfer subunit	identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970	gene	gene539	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0542
THEYE_A0543	THEYE_A0543		THEYE_A0543	528750	529661	+	dihydroorotate dehydrogenase%2C catalytic subunit	identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037	gene	gene540	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0543
THEYE_A0544	THEYE_A0544		THEYE_A0544	529642	530415	+	conserved Archaeal protein	identified by match to protein family HMM PF01887	gene	gene541	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0544
THEYE_A0545	THEYE_A0545	hslO	hslO	530408	531271	+	chaperonin HslO	identified by match to protein family HMM PF01430	gene	gene542	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0545
THEYE_A0546	THEYE_A0546	ligD	ligD	531258	531674	-	DNA ligase D%2C 3'-phosphoesterase domain	identified by match to protein family HMM TIGR02777	gene	gene543	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0546
THEYE_A0547	THEYE_A0547	truD	truD	531683	532855	-	tRNA pseudouridine synthase D	identified by match to protein family HMM PF01142	gene	gene544	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0547
THEYE_A0548	THEYE_A0548		THEYE_A0548	532873	533331	+	endoribonuclease L-PSP	identified by match to protein family HMM PF01042	gene	gene545	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0548
THEYE_A0549	THEYE_A0549		THEYE_A0549	533351	534064	-	ribosomal large subunit pseudouridine synthase B	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093	gene	gene546	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0549
THEYE_A0550	THEYE_A0550		THEYE_A0550	534068	535093	-	PpiC-type peptidyl-prolyl cis-trans isomerase%2C putative	identified by match to protein family HMM PF00639%3B match to protein family HMM PF09312	gene	gene547	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0550
THEYE_A0551	THEYE_A0551	hypE	hypE	535105	536103	-	hydrogenase expression/formation protein HypE	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR02124	gene	gene548	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0551
THEYE_A0552	THEYE_A0552		THEYE_A0552	536096	537217	-	fibronectin type III domain protein	identified by match to protein family HMM PF00041	gene	gene549	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0552
THEYE_A0553	THEYE_A0553	argH	argH	537214	538590	-	argininosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838	gene	gene550	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0553
THEYE_A0554	THEYE_A0554	fusA1	fusA1	539115	541211	-	translation elongation factor G	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484	gene	gene551	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0554
THEYE_A0555	THEYE_A0555	purB	purB	541241	542533	-	adenylosuccinate lyase	identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928	gene	gene552	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0555
THEYE_A0556	THEYE_A0556		THEYE_A0556	542536	543444	-	tRNA pseudouridine synthase B	identified by match to protein family HMM PF01509%3B match to protein family HMM PF09157%3B match to protein family HMM TIGR00431	gene	gene553	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0556
THEYE_A0557	THEYE_A0557		THEYE_A0557	543422	545521	-	organic solvent tolerance protein	identified by match to protein family HMM PF03968%3B match to protein family HMM PF04453	gene	gene554	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0557
THEYE_A0558	THEYE_A0558		THEYE_A0558	545518	546834	-	folylpolyglutamate synthase	identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499	gene	gene555	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0558
THEYE_A0559	THEYE_A0559	accD	accD	546831	547805	-	acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit	identified by match to protein family HMM TIGR00515	gene	gene556	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0559
THEYE_A0560	THEYE_A0560	trpA	trpA	547805	548584	-	tryptophan synthase%2C alpha subunit	identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262	gene	gene557	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0560
THEYE_A0561	THEYE_A0561	trpB	trpB	548581	549780	-	tryptophan synthase%2C beta subunit	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263	gene	gene558	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0561
THEYE_A0562	THEYE_A0562		THEYE_A0562	549865	551562	+	ABC transporter	identified by match to protein family HMM PF03109	gene	gene559	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0562
THEYE_A0563	THEYE_A0563		THEYE_A0563	551605	552282	+	lytic transglycosylase	identified by match to protein family HMM PF01464	gene	gene560	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0563
THEYE_A0564	THEYE_A0564	nadA	nadA	552264	553175	+	quinolinate synthetase complex%2C A subunit	identified by match to protein family HMM PF02445%3B match to protein family HMM TIGR00550	gene	gene561	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0564
THEYE_A0565	THEYE_A0565		THEYE_A0565	553182	554228	+	conserved hypothetical protein	identified by match to protein family HMM PF02636	gene	gene562	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0565
THEYE_A0566	THEYE_A0566		THEYE_A0566	554225	554773	-	SCP-like extracellular protein	identified by match to protein family HMM PF00188	gene	gene563	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0566
THEYE_A0567	THEYE_A0567		THEYE_A0567	554773	555933	-	acyl-CoA dehydrogenase%2C short-chain specific	identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028	gene	gene564	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0567
THEYE_A0568	THEYE_A0568		THEYE_A0568	555946	557271	-	PmbA protein%2C putative	identified by match to protein family HMM PF01523	gene	gene565	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0568
THEYE_A0569	THEYE_A0569		THEYE_A0569	557246	557614	-	6-pyruvoyl-tetrahydropterin synthase	identified by match to protein family HMM PF01242%3B match to protein family HMM TIGR03367	gene	gene566	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0569
THEYE_A0570	THEYE_A0570	hpt	hpt	557614	558138	-	hypoxanthine phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203	gene	gene567	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0570
THEYE_A0571	THEYE_A0571		THEYE_A0571	558335	559465	-	peptidase%2C M50 family protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF02163	gene	gene568	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0571
THEYE_A0572	THEYE_A0572		THEYE_A0572	559462	562137	-	cation-transporting ATPase%2C E1-E2 family	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494	gene	gene569	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0572
THEYE_A0573	THEYE_A0573		THEYE_A0573	562140	562544	-	conserved hypothetical protein		gene	gene570	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0573
THEYE_A0574	THEYE_A0574		THEYE_A0574	562627	563691	+	hypothetical protein	identified by glimmer%3B putative	gene	gene571	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0574
THEYE_A0575	THEYE_A0575		THEYE_A0575	563812	564033	+	conserved hypothetical protein		gene	gene572	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0575
THEYE_A0576	THEYE_A0576		THEYE_A0576	564023	564409	+	PIN domain%2C putative	identified by match to protein family HMM PF01850	gene	gene573	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0576
THEYE_A0577	THEYE_A0577		THEYE_A0577	564431	565540	-	conserved hypothetical protein		gene	gene574	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0577
THEYE_A0578	THEYE_A0578		THEYE_A0578	565632	566810	-	hypothetical protein	identified by glimmer%3B putative	gene	gene575	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0578
THEYE_A0579	THEYE_A0579		THEYE_A0579	567002	567127	-	hypothetical protein	identified by glimmer%3B putative	gene	gene576	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0579
THEYE_A0580	THEYE_A0580		THEYE_A0580	567353	568966	+	SA protein	identified by match to protein family HMM PF00501	gene	gene577	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0580
THEYE_A0581	THEYE_A0581		THEYE_A0581	568972	569964	+	glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependentdihydroxyacetone-phosphate reductase)	identified by match to protein family HMM PF01210%3B match to protein family HMM PF02558%3B match to protein family HMM PF03807%3B match to protein family HMM PF07479	gene	gene578	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0581
THEYE_A0582	THEYE_A0582	rimI	rimI	569993	570433	-	ribosomal-protein-alanine acetyltransferase	identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575	gene	gene579	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0582
THEYE_A0583	THEYE_A0583		THEYE_A0583	570442	571143	-	glycoprotein endopeptidase	identified by match to protein family HMM PF00814	gene	gene580	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0583
THEYE_A0584	THEYE_A0584	gidB	gidB	571131	571802	-	methyltransferase GidB	identified by match to protein family HMM PF02527%3B match to protein family HMM PF08241%3B match to protein family HMM TIGR00138	gene	gene581	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0584
THEYE_A0585	THEYE_A0585	gidA1	gidA1	571807	573681	-	glucose-inhibited division protein A	identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136	gene	gene582	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0585
THEYE_A0586	THEYE_A0586		THEYE_A0586	573726	575288	+	sigma-54 interaction domain family	identified by match to protein family HMM PF00158%3B match to protein family HMM PF08668	gene	gene583	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0586
THEYE_A0587	THEYE_A0587		THEYE_A0587	575250	576140	-	membrane protein%2C putative	identified by match to protein family HMM PF03706%3B match to protein family HMM TIGR00374	gene	gene584	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0587
THEYE_A0588	THEYE_A0588		THEYE_A0588	576137	577081	-	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	identified by match to protein family HMM PF00535	gene	gene585	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0588
THEYE_A0589	THEYE_A0589		THEYE_A0589	577093	579111	-	putative protein	identified by match to protein family HMM PF01569%3B match to protein family HMM PF02366	gene	gene586	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0589
THEYE_A0590	THEYE_A0590		THEYE_A0590	579148	579543	+	formate dehydrogenase iron-sulfur subunit	identified by match to protein family HMM PF00037	gene	gene587	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0590
THEYE_A0591	THEYE_A0591		THEYE_A0591	579540	581300	+	aldehyde ferredoxin oxidoreductase	identified by match to protein family HMM PF02730	gene	gene588	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0591
THEYE_A0592	THEYE_A0592		THEYE_A0592	581307	582617	+	membrane-bound serine protease	identified by match to protein family HMM PF01957	gene	gene589	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0592
THEYE_A0593	THEYE_A0593		THEYE_A0593	582614	583576	+	NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF05368%3B match to protein family HMM PF07993	gene	gene590	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0593
THEYE_A0594	THEYE_A0594	glyA1	glyA1	583537	584757	+	serine hydroxymethyltransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00202%3B match to protein family HMM PF00266%3B match to protein family HMM PF00464%3B match to protein family HMM PF01212	gene	gene591	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0594
THEYE_A0595	THEYE_A0595		THEYE_A0595	584872	585363	-	hypothetical protein	identified by glimmer%3B putative	gene	gene592	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0595
THEYE_A0596	THEYE_A0596		THEYE_A0596	585318	586241	-	prepilin-type N-terminal cleavage/methylation domain protein	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene593	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0596
THEYE_A0597	THEYE_A0597		THEYE_A0597	586238	586858	-	prepilin-type N-terminal cleavage/methylation domain protein	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene594	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0597
THEYE_A0598	THEYE_A0598		THEYE_A0598	586836	587291	-	hypothetical protein	identified by glimmer%3B putative	gene	gene595	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0598
THEYE_A0599	THEYE_A0599		THEYE_A0599	587276	591016	-	conserved hypothetical protein		gene	gene596	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0599
THEYE_A0600	THEYE_A0600		THEYE_A0600	591024	591314	-	hypothetical protein	identified by glimmer%3B putative	gene	gene597	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0600
THEYE_A0601	THEYE_A0601		THEYE_A0601	591389	591814	-	protein of unknown function	identified by match to protein family HMM PF01934	gene	gene598	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0601
THEYE_A0602	THEYE_A0602		THEYE_A0602	591818	592231	-	nucleotidyltransferase%2C putative	identified by match to protein family HMM PF01909	gene	gene599	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0602
THEYE_A0603	THEYE_A0603		THEYE_A0603	592497	593390	-	hypothetical protein	identified by glimmer%3B putative	gene	gene600	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0603
THEYE_A0604	THEYE_A0604		THEYE_A0604	593387	594031	-	two-component response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene601	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0604
THEYE_A0605	THEYE_A0605	groL	groL	594121	595743	-	chaperonin GroL	identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348	gene	gene602	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0605
THEYE_A0606	THEYE_A0606	groS2	groS2	595760	596026	-	chaperonin GroS	identified by match to protein family HMM PF00166	gene	gene603	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0606
THEYE_A0607	THEYE_A0607		THEYE_A0607	596360	597571	+	transglycosylase%2C Slt family	identified by match to protein family HMM PF01464%3B match to protein family HMM PF01476	gene	gene604	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0607
THEYE_A0608	THEYE_A0608		THEYE_A0608	597568	598170	-	tetratricopeptide repeat domain protein		gene	gene605	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0608
THEYE_A0609	THEYE_A0609		THEYE_A0609	598167	598817	-	PHP domain protein	identified by match to protein family HMM PF02811	gene	gene606	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0609
THEYE_A0610	THEYE_A0610		THEYE_A0610	598814	599374	-	isochorismatase family protein	identified by match to protein family HMM PF00857	gene	gene607	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0610
THEYE_A0611	THEYE_A0611		THEYE_A0611	599375	599749	-	two-component response regulator	identified by match to protein family HMM PF00072	gene	gene608	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0611
THEYE_A0612	THEYE_A0612		THEYE_A0612	599730	601592	-	two-component hybrid sensor and regulator	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene609	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0612
THEYE_A0613	THEYE_A0613		THEYE_A0613	601589	602791	-	conserved hypothetical protein		gene	gene610	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0613
THEYE_A0614	THEYE_A0614		THEYE_A0614	602830	603054	-	conserved protein	identified by match to protein family HMM PF01206	gene	gene611	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0614
THEYE_A0615	THEYE_A0615		THEYE_A0615	603035	604861	-	CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2%2C putative	identified by match to protein family HMM PF00037	gene	gene612	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0615
THEYE_A0616	THEYE_A0616		THEYE_A0616	604910	605137	-	conserved domain protein	identified by match to protein family HMM PF00037	gene	gene613	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0616
THEYE_A0617	THEYE_A0617	aspS	aspS	605240	607024	+	aspartyl-tRNA synthetase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459	gene	gene614	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0617
THEYE_A0618	THEYE_A0618		THEYE_A0618	607038	607328	+	hypothetical protein	identified by glimmer%3B putative	gene	gene615	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0618
THEYE_A0619	THEYE_A0619		THEYE_A0619	607325	608161	+	HD domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277	gene	gene616	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0619
THEYE_A0620	THEYE_A0620		THEYE_A0620	608154	609083	+	ggdef domain protein	identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254	gene	gene617	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0620
THEYE_A0621	THEYE_A0621		THEYE_A0621	609080	609355	-	conserved hypothetical protein		gene	gene618	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0621
THEYE_A0622	THEYE_A0622		THEYE_A0622	609348	609554	-	hypothetical protein	identified by glimmer%3B putative	gene	gene619	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0622
THEYE_A0623	THEYE_A0623		THEYE_A0623	609551	611461	-	soluble lytic murein transglycosylase	identified by match to protein family HMM PF01464%3B match to protein family HMM PF07719	gene	gene620	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0623
THEYE_A0624	THEYE_A0624	aroC	aroC	611468	612679	-	chorismate synthase	identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033	gene	gene621	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0624
THEYE_A0625	THEYE_A0625		THEYE_A0625	612730	613266	-	flavin reductase domain protein	identified by match to protein family HMM PF01613	gene	gene622	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0625
THEYE_A0626	THEYE_A0626		THEYE_A0626	613346	615157	+	metalloprotease FtsH	identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR01241	gene	gene623	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0626
THEYE_A0627	THEYE_A0627	folP	folP	615154	615990	+	dihydropteroate synthase	identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496	gene	gene624	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0627
THEYE_A0628	THEYE_A0628	argS	argS	615992	617608	-	arginyl-tRNA synthetase	identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456	gene	gene625	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0628
THEYE_A0629	THEYE_A0629	purL	purL	617601	621512	-	phosphoribosylformylglycinamidine synthase	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR01735	gene	gene626	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0629
THEYE_A0630	THEYE_A0630		THEYE_A0630	621509	621907	-	conserved hypothetical protein%2C putative	identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369	gene	gene627	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0630
THEYE_A0631	THEYE_A0631	rho	rho	621904	623175	-	transcription termination factor Rho	identified by match to protein family HMM PF00006%3B match to protein family HMM PF07497%3B match to protein family HMM PF07498%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00767	gene	gene628	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0631
THEYE_A0632	THEYE_A0632		THEYE_A0632	623754	624863	+	CRISPR-associated protein%2C NE0113 family	identified by match to protein family HMM TIGR02584	gene	gene629	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0632
THEYE_A0633	THEYE_A0633	csm1_2	csm1_2	624968	627553	+	CRISPR-associated protein%2C Csm1 family	identified by match to protein family HMM TIGR02578	gene	gene630	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0633
THEYE_A0634	THEYE_A0634	csm2_2	csm2_2	627550	627981	+	CRISPR-associated protein%2C Csm2 family	identified by match to protein family HMM TIGR01870	gene	gene631	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0634
THEYE_A0635	THEYE_A0635	csm3_2	csm3_2	627985	628719	+	CRISPR-associated RAMP protein%2C Csm3 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR02582	gene	gene632	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0635
THEYE_A0636	THEYE_A0636		THEYE_A0636	628723	629637	+	CRISPR-associated protein%2C Csm4 family		gene	gene633	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0636
THEYE_A0637	THEYE_A0637	csm5_2	csm5_2	629639	630724	+	CRISPR-associated RAMP protein%2C Csm5 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR01899	gene	gene634	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0637
THEYE_A0638	THEYE_A0638	cas6_2	cas6_2	630726	631622	+	CRISPR-associated protein Cas6	identified by match to protein family HMM TIGR01877	gene	gene635	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0638
THEYE_A0639	THEYE_A0639		THEYE_A0639	634162	634512	+	hypothetical protein	identified by glimmer%3B putative	gene	gene636	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0639
THEYE_A0640	THEYE_A0640		THEYE_A0640	634544	636166	+	swi/snf family helicase_2	identified by match to protein family HMM PF00176	gene	gene637	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0640
THEYE_A0641	THEYE_A0641		THEYE_A0641	636316	637479	+	exonuclease SbcD	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619	gene	gene638	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0641
THEYE_A0642	THEYE_A0642		THEYE_A0642	637466	640561	+	ATPase involved in DNA repair%2C putative		gene	gene639	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0642
THEYE_A0643	THEYE_A0643	cas2_1	cas2_1	640571	640849	+	CRISPR-associated protein Cas2	identified by match to protein family HMM TIGR01573	gene	gene640	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0643
THEYE_A0644	THEYE_A0644		THEYE_A0644	640854	641810	+	crispr-associated protein Cas1	identified by match to protein family HMM PF01867%3B match to protein family HMM TIGR00287	gene	gene641	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0644
THEYE_A0645	THEYE_A0645		THEYE_A0645	641767	642585	+	hypothetical protein	identified by glimmer%3B putative	gene	gene642	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0645
THEYE_A0646	THEYE_A0646	cas2_2	cas2_2	642582	642857	+	CRISPR-associated protein Cas2	identified by match to protein family HMM PF02647%3B match to protein family HMM TIGR01573	gene	gene643	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0646
THEYE_A0647	THEYE_A0647		THEYE_A0647	643012	643089	-	tRNA-Lys		tRNA	gene644	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0647
THEYE_A0648	THEYE_A0648		THEYE_A0648	643178	643651	+	methylated-DNA--protein-cysteine methyltransferase	identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589	gene	gene645	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0648
THEYE_A0649	THEYE_A0649		THEYE_A0649	643659	644396	+	intermediate filament protein:ATP/GTP-binding site motif A (P-loop):AAA ATPase	identified by match to protein family HMM PF05673	gene	gene646	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0649
THEYE_A0650	THEYE_A0650	leuA	leuA	644376	645890	-	2-isopropylmalate synthase	identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00973	gene	gene647	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0650
THEYE_A0651	THEYE_A0651		THEYE_A0651	645868	646653	-	CDP-diacylglycerol--serine O-phosphatidyltransferase	identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00473	gene	gene648	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0651
THEYE_A0652	THEYE_A0652		THEYE_A0652	646659	647276	-	putative phosphatidylserine decarboxylase	identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00164	gene	gene649	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0652
THEYE_A0653	THEYE_A0653	ilvC	ilvC	647273	648286	-	ketol-acid reductoisomerase	identified by match to protein family HMM PF01450%3B match to protein family HMM PF02629%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465	gene	gene650	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0653
THEYE_A0654	THEYE_A0654	ileS	ileS	648417	651164	+	isoleucyl-tRNA synthetase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392	gene	gene651	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0654
THEYE_A0655	THEYE_A0655	lspA	lspA	651145	651588	+	signal peptidase II	identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077	gene	gene652	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0655
THEYE_A0656	THEYE_A0656		THEYE_A0656	651585	651992	+	conserved hypothetical protein	identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150	gene	gene653	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0656
THEYE_A0657	THEYE_A0657		THEYE_A0657	651993	652844	+	probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)	identified by match to protein family HMM PF01513	gene	gene654	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0657
THEYE_A0658	THEYE_A0658		THEYE_A0658	652829	653542	+	uracil-DNA glycosylase%2C family 4	identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00758	gene	gene655	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0658
THEYE_A0659	THEYE_A0659		THEYE_A0659	653539	654024	+	hit histidine triad protein	identified by match to protein family HMM PF01230	gene	gene656	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0659
THEYE_A0660	THEYE_A0660	gmhA	gmhA	654024	654629	+	phosphoheptose isomerase	identified by match to protein family HMM PF01380%3B match to protein family HMM TIGR00441	gene	gene657	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0660
THEYE_A0661	THEYE_A0661	ruvC	ruvC	654626	655096	+	crossover junction endodeoxyribonuclease RuvC	identified by match to protein family HMM PF02075%3B match to protein family HMM TIGR00228	gene	gene658	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0661
THEYE_A0662	THEYE_A0662		THEYE_A0662	655176	656090	+	acetoin utilization protein	identified by match to protein family HMM PF00850	gene	gene659	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0662
THEYE_A0663	THEYE_A0663		THEYE_A0663	656087	656509	-	conserved hypothetical protein	identified by match to protein family HMM PF03479	gene	gene660	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0663
THEYE_A0664	THEYE_A0664		THEYE_A0664	656506	657738	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene661	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0664
THEYE_A0665	THEYE_A0665		THEYE_A0665	657784	659907	-	iron-sulfur cluster-binding protein	identified by match to protein family HMM PF00037%3B match to protein family HMM PF02589%3B match to protein family HMM PF02754	gene	gene662	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0665
THEYE_A0666	THEYE_A0666		THEYE_A0666	659918	660454	-	YvbY	identified by match to protein family HMM PF02589	gene	gene663	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0666
THEYE_A0667	THEYE_A0667		THEYE_A0667	660447	661763	-	iron-sulfur cluster-binding protein	identified by match to protein family HMM PF00037%3B match to protein family HMM PF02754	gene	gene664	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0667
THEYE_A0668	THEYE_A0668		THEYE_A0668	661765	663156	-	glycolate oxidase subunit	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913	gene	gene665	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0668
THEYE_A0669	THEYE_A0669		THEYE_A0669	663153	664919	-	glycolate permease GlcA	identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795	gene	gene666	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0669
THEYE_A0670	THEYE_A0670	argF	argF	665016	665915	-	ornithine carbamoyltransferase	identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658	gene	gene667	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0670
THEYE_A0671	THEYE_A0671		THEYE_A0671	665912	667117	-	acetylornithine aminotransferase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00707	gene	gene668	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0671
THEYE_A0672	THEYE_A0672		THEYE_A0672	667283	667834	+	5%2C10-methenyltetrahydrofolate synthetase	identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727	gene	gene669	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0672
THEYE_A0673	THEYE_A0673	folE	folE	667827	668393	+	GTP cyclohydrolase I	identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR00063	gene	gene670	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0673
THEYE_A0674	THEYE_A0674		THEYE_A0674	668394	669254	+	FolD bifunctional protein	identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882	gene	gene671	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0674
THEYE_A0675	THEYE_A0675		THEYE_A0675	669251	669898	+	conserved hypothetical protein		gene	gene672	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0675
THEYE_A0676	THEYE_A0676		THEYE_A0676	669901	670788	+	methylenetetrahydrofolate reductase family protein	identified by match to protein family HMM PF02219	gene	gene673	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0676
THEYE_A0677	THEYE_A0677	pilB1	pilB1	670789	672495	+	type IV-A pilus assembly ATPase PilB	identified by match to protein family HMM PF00437%3B match to protein family HMM PF05157%3B match to protein family HMM TIGR02538	gene	gene674	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0677
THEYE_A0678	THEYE_A0678	nadB	nadB	672497	674074	+	L-aspartate oxidase	identified by match to protein family HMM PF00890%3B match to protein family HMM PF02910%3B match to protein family HMM TIGR00551	gene	gene675	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0678
THEYE_A0679	THEYE_A0679	pyk	pyk	674086	675504	+	pyruvate kinase	identified by match to protein family HMM PF00224%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064	gene	gene676	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0679
THEYE_A0680	THEYE_A0680		THEYE_A0680	675499	676407	-	transcriptional regulator	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene677	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0680
THEYE_A0681	THEYE_A0681		THEYE_A0681	676528	676791	+	conserved protein	identified by match to protein family HMM PF02583	gene	gene678	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0681
THEYE_A0682	THEYE_A0682		THEYE_A0682	676805	676987	+	putative regulatory protein%2C FmdB family	identified by match to protein family HMM TIGR02605	gene	gene679	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0682
THEYE_A0683	THEYE_A0683		THEYE_A0683	677028	678005	+	iron-sulfur protein	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01409	gene	gene680	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0683
THEYE_A0684	THEYE_A0684		THEYE_A0684	677995	678651	+	lipoprotein%2C putative		gene	gene681	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0684
THEYE_A0685	THEYE_A0685		THEYE_A0685	678763	679008	-	hypothetical protein	identified by glimmer%3B putative	gene	gene682	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0685
THEYE_A0686	THEYE_A0686		THEYE_A0686	679117	679887	-	NAD-dependent deacetylase	identified by match to protein family HMM PF02146	gene	gene683	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0686
THEYE_A0687	THEYE_A0687	uvrB	uvrB	679929	681944	-	excinuclease ABC%2C B subunit	identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00631	gene	gene684	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0687
THEYE_A0688	THEYE_A0688		THEYE_A0688	681955	682287	-	nucleotidyltransferase	identified by match to protein family HMM PF01934	gene	gene685	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0688
THEYE_A0689	THEYE_A0689		THEYE_A0689	682284	682577	-	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene686	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0689
THEYE_A0690	THEYE_A0690	hemB	hemB	682583	683551	-	delta-aminolevulinic acid dehydratase	identified by match to protein family HMM PF00490	gene	gene687	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0690
THEYE_A0691	THEYE_A0691		THEYE_A0691	683555	683875	-	HesB/YadR/YfhF family protein	identified by match to protein family HMM PF01521%3B match to protein family HMM TIGR00049	gene	gene688	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0691
THEYE_A0692	THEYE_A0692	fdhD	fdhD	683965	684726	+	formate dehydrogenase family accessory protein FdhD	identified by match to protein family HMM PF02634%3B match to protein family HMM TIGR00129	gene	gene689	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0692
THEYE_A0693	THEYE_A0693	nth	nth	684723	685355	-	endonuclease III	identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083	gene	gene690	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0693
THEYE_A0694	THEYE_A0694		THEYE_A0694	685357	686373	-	alcohol dehydrogenase	identified by match to protein family HMM PF08240	gene	gene691	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0694
THEYE_A0695	THEYE_A0695		THEYE_A0695	686547	687305	+	diguanylate cyclase	identified by match to protein family HMM PF00990%3B match to protein family HMM TIGR00254	gene	gene692	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0695
THEYE_A0696	THEYE_A0696	recG	recG	687302	689374	-	ATP-dependent DNA helicase RecG	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF01336%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00643	gene	gene693	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0696
THEYE_A0697	THEYE_A0697	nusA	nusA	689380	690477	-	transcription termination factor NusA	identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953	gene	gene694	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0697
THEYE_A0698	THEYE_A0698		THEYE_A0698	690482	690976	-	YlxS	identified by match to protein family HMM PF02576	gene	gene695	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0698
THEYE_A0699	THEYE_A0699		THEYE_A0699	691103	691345	-	lipoprotein%2C putative		gene	gene696	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0699
THEYE_A0700	THEYE_A0700		THEYE_A0700	691459	691830	-	conserved hypothetical protein		gene	gene697	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0700
THEYE_A0701	THEYE_A0701		THEYE_A0701	691957	692394	-	conserved hypothetical protein	identified by match to protein family HMM PF02566	gene	gene698	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0701
THEYE_A0702	THEYE_A0702		THEYE_A0702	692396	692806	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene699	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0702
THEYE_A0703	THEYE_A0703	priA	priA	692897	694774	+	primosomal protein N'	identified by match to protein family HMM TIGR00595	gene	gene700	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0703
THEYE_A0704	THEYE_A0704	ribF	ribF	694763	695716	-	riboflavin biosynthesis protein RibF	identified by match to protein family HMM PF01467%3B match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083%3B match to protein family HMM TIGR00125	gene	gene701	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0704
THEYE_A0705	THEYE_A0705	coaE	coaE	695703	696314	-	dephospho-CoA kinase	identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152	gene	gene702	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0705
THEYE_A0706	THEYE_A0706	mutS	mutS	696307	698865	-	DNA mismatch repair protein MutS	identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070	gene	gene703	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0706
THEYE_A0707	THEYE_A0707		THEYE_A0707	698957	700222	+	response regulator HsfA	identified by match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene704	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0707
THEYE_A0708	THEYE_A0708		THEYE_A0708	700392	700538	+	hypothetical protein	identified by glimmer%3B putative	gene	gene705	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0708
THEYE_A0709	THEYE_A0709		THEYE_A0709	700610	701878	+	membrane protein%2C putative	identified by match to protein family HMM PF01925	gene	gene706	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0709
THEYE_A0710	THEYE_A0710		THEYE_A0710	701880	702626	+	conserved hypothetical protein		gene	gene707	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0710
THEYE_A0711	THEYE_A0711		THEYE_A0711	702629	703459	+	universal stress protein	identified by match to protein family HMM PF00582	gene	gene708	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0711
THEYE_A0712	THEYE_A0712		THEYE_A0712	703643	705082	+	sensory box sensor histidine kianse/response regulator	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene709	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0712
THEYE_A0713	THEYE_A0713		THEYE_A0713	705517	705654	+	hypothetical protein	identified by glimmer%3B putative	gene	gene710	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0713
THEYE_A0714	THEYE_A0714		THEYE_A0714	705751	706431	+	hypothetical protein	identified by glimmer%3B putative	gene	gene711	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0714
THEYE_A0715	THEYE_A0715		THEYE_A0715	706431	707237	+	cytochrome c biogenesis protein%2C CcmF/CcyK/CcsA family	identified by match to protein family HMM PF01578	gene	gene712	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0715
THEYE_A0716	THEYE_A0716	hemA	hemA	707234	708523	+	glutamyl-tRNA reductase	identified by match to protein family HMM PF00745%3B match to protein family HMM PF01488%3B match to protein family HMM PF05201%3B match to protein family HMM TIGR01035	gene	gene713	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0716
THEYE_A0717	THEYE_A0717	hemC	hemC	708504	709439	+	porphobilinogen deaminase	identified by match to protein family HMM PF01379%3B match to protein family HMM PF03900%3B match to protein family HMM TIGR00212	gene	gene714	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0717
THEYE_A0718	THEYE_A0718		THEYE_A0718	709452	710981	+	uroporphyrinogen III synthase/methyltransferase	identified by match to protein family HMM PF00590%3B match to protein family HMM PF02602%3B match to protein family HMM TIGR01469	gene	gene715	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0718
THEYE_A0719	THEYE_A0719	hemG	hemG	710963	712315	+	protoporphyrinogen oxidase	identified by match to protein family HMM PF01266%3B match to protein family HMM PF01593%3B match to protein family HMM TIGR00562	gene	gene716	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0719
THEYE_A0720	THEYE_A0720		THEYE_A0720	712359	712553	-	hypothetical protein	identified by glimmer%3B putative	gene	gene717	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0720
THEYE_A0721	THEYE_A0721		THEYE_A0721	712537	713046	-	hypothetical protein	identified by glimmer%3B putative	gene	gene718	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0721
THEYE_A0722	THEYE_A0722		THEYE_A0722	713259	713384	+	hypothetical protein	identified by glimmer%3B putative	gene	gene719	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0722
THEYE_A0723	THEYE_A0723		THEYE_A0723	713455	714429	+	transporter%2C auxin efflux carrier (AEC) family	identified by match to protein family HMM PF03547	gene	gene720	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0723
THEYE_A0724	THEYE_A0724		THEYE_A0724	714504	716693	+	sensory box sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene721	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0724
THEYE_A0725	THEYE_A0725		THEYE_A0725	716708	717127	+	FrgC	identified by match to protein family HMM PF00072	gene	gene722	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0725
THEYE_A0726	THEYE_A0726		THEYE_A0726	717199	719748	-	probable phosphoenolpyruvate synthase	identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326	gene	gene723	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0726
THEYE_A0727	THEYE_A0727		THEYE_A0727	719888	720628	+	transcriptional regulator%2C putative	identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702	gene	gene724	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0727
THEYE_A0728	THEYE_A0728		THEYE_A0728	720646	721167	+	CBS domain pair%2C putative	identified by match to protein family HMM PF00571	gene	gene725	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0728
THEYE_A0729	THEYE_A0729		THEYE_A0729	721177	722688	+	transmembrane transport protein-like protein	identified by match to protein family HMM PF00939%3B match to protein family HMM PF03600	gene	gene726	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0729
THEYE_A0730	THEYE_A0730		THEYE_A0730	722699	723409	+	low-co2 inducible protein lcib		gene	gene727	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0730
THEYE_A0731	THEYE_A0731		THEYE_A0731	723419	725155	+	arsenical pump membrane protein	identified by match to protein family HMM PF02040%3B match to protein family HMM PF03600	gene	gene728	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0731
THEYE_A0732	THEYE_A0732		THEYE_A0732	725171	726100	+	universal stress protein family	identified by match to protein family HMM PF00582	gene	gene729	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0732
THEYE_A0733	THEYE_A0733		THEYE_A0733	726110	726490	+	sporulation initiation phosphotransferase F	identified by match to protein family HMM PF00072	gene	gene730	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0733
THEYE_A0734	THEYE_A0734		THEYE_A0734	726497	726940	+	FrgC	identified by match to protein family HMM PF00072	gene	gene731	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0734
THEYE_A0735	THEYE_A0735		THEYE_A0735	727148	728317	+	DNA methylase domain protein	identified by match to protein family HMM PF01555%3B match to protein family HMM PF08241	gene	gene732	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0735
THEYE_A0736	THEYE_A0736		THEYE_A0736	728304	728990	+	putative type II restriction enzyme MjaVIP		gene	gene733	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0736
THEYE_A0737	THEYE_A0737		THEYE_A0737	729305	729718	-	conserved hypothetical protein		gene	gene734	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0737
THEYE_A0738	THEYE_A0738		THEYE_A0738	729732	730676	-	conserved hypothetical protein	identified by match to protein family HMM PF01925	gene	gene735	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0738
THEYE_A0739	THEYE_A0739		THEYE_A0739	731079	731537	+	response regulator	identified by match to protein family HMM PF00072	gene	gene736	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0739
THEYE_A0740	THEYE_A0740		THEYE_A0740	731539	732168	-	hypothetical protein	identified by glimmer%3B putative	gene	gene737	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0740
THEYE_A0741	THEYE_A0741		THEYE_A0741	732165	732542	-	sporulation initiation phosphotransferase F	identified by match to protein family HMM PF00072	gene	gene738	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0741
THEYE_A0742	THEYE_A0742		THEYE_A0742	732539	734242	-	sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene739	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0742
THEYE_A0743	THEYE_A0743		THEYE_A0743	734280	735626	-	response regulator HsfA	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene740	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0743
THEYE_A0744	THEYE_A0744		THEYE_A0744	735619	737088	-	sensory Transduction Protein Kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene741	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0744
THEYE_A0745	THEYE_A0745		THEYE_A0745	737138	737251	+	hypothetical protein	identified by glimmer%3B putative	gene	gene742	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0745
THEYE_A0746	THEYE_A0746		THEYE_A0746	737285	738913	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene743	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0746
THEYE_A0747	THEYE_A0747		THEYE_A0747	738917	740752	+	sensor histidine kinase%2C putative	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene744	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0747
THEYE_A0748	THEYE_A0748		THEYE_A0748	741069	741383	+	hypothetical protein	identified by glimmer%3B putative	gene	gene745	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0748
THEYE_A0749	THEYE_A0749		THEYE_A0749	741600	742211	+	DedA protein%2C putative	identified by match to protein family HMM PF09335	gene	gene746	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0749
THEYE_A0750	THEYE_A0750		THEYE_A0750	742208	742780	-	conserved hypothetical protein		gene	gene747	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0750
THEYE_A0751	THEYE_A0751		THEYE_A0751	742764	744137	-	sensor histidine kinase%2C putative	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene748	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0751
THEYE_A0752	THEYE_A0752		THEYE_A0752	744140	744808	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene749	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0752
THEYE_A0753	THEYE_A0753		THEYE_A0753	744812	745339	-	hypothetical protein	identified by glimmer%3B putative	gene	gene750	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0753
THEYE_A0754	THEYE_A0754		THEYE_A0754	745348	746097	-	heme exporter protein B%2C putative	identified by match to protein family HMM PF01061	gene	gene751	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0754
THEYE_A0755	THEYE_A0755		THEYE_A0755	746094	746804	-	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene752	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0755
THEYE_A0756	THEYE_A0756		THEYE_A0756	746853	747269	-	peptidase propeptide and ypeb domain protein	identified by match to protein family HMM PF03413	gene	gene753	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0756
THEYE_A0757	THEYE_A0757		THEYE_A0757	747427	747660	+	hypothetical protein	identified by glimmer%3B putative	gene	gene754	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0757
THEYE_A0758	THEYE_A0758		THEYE_A0758	747699	749702	-	ATP-dependent protease La 1	identified by match to protein family HMM PF00004%3B match to protein family HMM PF00072%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728	gene	gene755	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0758
THEYE_A0759	THEYE_A0759		THEYE_A0759	749857	750276	+	hypothetical protein	identified by glimmer%3B putative	gene	gene756	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0759
THEYE_A0760	THEYE_A0760		THEYE_A0760	750278	750568	+	conserved hypothetical protein		gene	gene757	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0760
THEYE_A0761	THEYE_A0761		THEYE_A0761	750811	751899	+	membrane protein%2C putative	identified by match to protein family HMM PF01925	gene	gene758	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0761
THEYE_A0762	THEYE_A0762		THEYE_A0762	751917	752768	+	universal stress protein%2C putative	identified by match to protein family HMM PF00582	gene	gene759	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0762
THEYE_A0763	THEYE_A0763		THEYE_A0763	752765	753373	+	hypothetical protein	identified by glimmer%3B putative	gene	gene760	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0763
THEYE_A0764	THEYE_A0764		THEYE_A0764	753358	754062	-	high-affinity branched-chain amino acid transport%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene761	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0764
THEYE_A0765	THEYE_A0765		THEYE_A0765	754062	754805	-	branched-chain amino acid ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene762	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0765
THEYE_A0766	THEYE_A0766		THEYE_A0766	754817	755773	-	high-affinity branched-chain amino acid transport system permease protein livm	identified by match to protein family HMM PF02653	gene	gene763	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0766
THEYE_A0767	THEYE_A0767		THEYE_A0767	755775	756653	-	branched-chain amino acid ABC transporter%2C permease protein	identified by match to protein family HMM PF02653	gene	gene764	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0767
THEYE_A0768	THEYE_A0768		THEYE_A0768	756711	757913	-	leu/ile/val-binding protein	identified by match to protein family HMM PF01094	gene	gene765	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0768
THEYE_A0769	THEYE_A0769		THEYE_A0769	757975	759378	-	NAD-dependent malic enzyme	identified by match to protein family HMM PF00390%3B match to protein family HMM PF01488%3B match to protein family HMM PF01842%3B match to protein family HMM PF03949	gene	gene766	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0769
THEYE_A0770	THEYE_A0770	sdhA	sdhA	759454	761187	+	succinate dehydrogenase%2C flavoprotein subunit	identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266%3B match to protein family HMM PF02910%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01812%3B match to protein family HMM TIGR01816	gene	gene767	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0770
THEYE_A0771	THEYE_A0771		THEYE_A0771	761187	761906	+	succinate dehydrogenase iron-sulfur protein	identified by match to protein family HMM PF00111%3B match to protein family HMM TIGR00384	gene	gene768	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0771
THEYE_A0772	THEYE_A0772		THEYE_A0772	761903	762247	+	succinate dehydrogenase%2C cytochrome B-556 subunit%2C putative	identified by match to protein family HMM TIGR02970	gene	gene769	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0772
THEYE_A0773	THEYE_A0773		THEYE_A0773	762247	762561	+	succinate dehydrogenase membrane subunit%2C putative	identified by match to protein family HMM PF01127%3B match to protein family HMM TIGR02968	gene	gene770	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0773
THEYE_A0774	THEYE_A0774		THEYE_A0774	762581	763792	+	type IV pilin	identified by match to protein family HMM PF00482	gene	gene771	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0774
THEYE_A0775	THEYE_A0775		THEYE_A0775	763802	764656	-	peptidase%2C M48 family	identified by match to protein family HMM PF01435	gene	gene772	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0775
THEYE_A0776	THEYE_A0776		THEYE_A0776	764653	765123	-	hypothetical protein	identified by glimmer%3B putative	gene	gene773	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0776
THEYE_A0777	THEYE_A0777		THEYE_A0777	765120	767216	-	adenylate/guanylate cyclase catalytic domain protein	identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226	gene	gene774	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0777
THEYE_A0778	THEYE_A0778		THEYE_A0778	767643	767797	-	tRNA-His		tRNA	gene775	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0778
THEYE_A0779	THEYE_A0779		THEYE_A0779	767878	768525	+	indolepyruvate oxidoreductase subunit IorB	identified by match to protein family HMM PF01558	gene	gene776	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0779
THEYE_A0780	THEYE_A0780		THEYE_A0780	768476	769771	+	PaaF		gene	gene777	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0780
THEYE_A0781	THEYE_A0781		THEYE_A0781	769781	770203	+	acetolactate synthase small subunit	identified by match to protein family HMM PF01842	gene	gene778	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0781
THEYE_A0782	THEYE_A0782		THEYE_A0782	770213	771517	+	aerobic phenylacetate-CoA ligase		gene	gene779	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0782
THEYE_A0783	THEYE_A0783		THEYE_A0783	771528	771959	+	ACT domain protein	identified by match to protein family HMM PF01842	gene	gene780	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0783
THEYE_A0784	THEYE_A0784		THEYE_A0784	771948	773498	-	indolepyruvate oxidoreductase subunit IorA	identified by match to protein family HMM PF02775	gene	gene781	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0784
THEYE_A0785	THEYE_A0785		THEYE_A0785	773580	775166	+	2-isopropylmalate synthase/homocitrate synthase family protein	identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502%3B match to protein family HMM TIGR00977	gene	gene782	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0785
THEYE_A0786	THEYE_A0786		THEYE_A0786	775163	775498	+	histidine biosynthesis bifunctional protein hisIE	identified by match to protein family HMM PF01502	gene	gene783	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0786
THEYE_A0787	THEYE_A0787		THEYE_A0787	775501	775842	+	diadenosine tetraphosphate (Ap4A) hydrolase	identified by match to protein family HMM PF01230	gene	gene784	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0787
THEYE_A0788	THEYE_A0788		THEYE_A0788	775852	776412	+	MutT/nudix family protein	identified by match to protein family HMM PF00293	gene	gene785	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0788
THEYE_A0789	THEYE_A0789		THEYE_A0789	776450	776632	-	conserved domain protein	identified by match to protein family HMM PF00037	gene	gene786	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0789
THEYE_A0790	THEYE_A0790	proA	proA	776721	777977	+	gamma-glutamyl phosphate reductase	identified by match to protein family HMM PF00171%3B match to protein family HMM TIGR00407	gene	gene787	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0790
THEYE_A0791	THEYE_A0791	nadD	nadD	777932	778591	+	nicotinate (nicotinamide) nucleotide adenylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482	gene	gene788	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0791
THEYE_A0792	THEYE_A0792		THEYE_A0792	778600	779502	+	transcriptional regulator	identified by match to protein family HMM PF02954	gene	gene789	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0792
THEYE_A0793	THEYE_A0793	rpsF	rpsF	779598	779960	+	ribosomal protein S6	identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166	gene	gene790	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0793
THEYE_A0794	THEYE_A0794		THEYE_A0794	779963	780349	+	single-strand binding protein family	identified by match to protein family HMM PF00436%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00621	gene	gene791	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0794
THEYE_A0795	THEYE_A0795	rpsR	rpsR	780361	780594	+	ribosomal protein S18	identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165	gene	gene792	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0795
THEYE_A0796	THEYE_A0796		THEYE_A0796	780681	780881	+	conserved hypothetical protein		gene	gene793	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0796
THEYE_A0797	THEYE_A0797		THEYE_A0797	780878	781156	+	conserved hypothetical protein		gene	gene794	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0797
THEYE_A0798	THEYE_A0798		THEYE_A0798	781156	781470	+	HNH endonuclease family protein	identified by match to protein family HMM PF01844	gene	gene795	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0798
THEYE_A0799	THEYE_A0799		THEYE_A0799	781467	782330	-	cation efflux system protein	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene796	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0799
THEYE_A0800	THEYE_A0800		THEYE_A0800	782309	783028	-	putative inner membrane protein	identified by match to protein family HMM PF07313	gene	gene797	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0800
THEYE_A0801	THEYE_A0801		THEYE_A0801	783044	783871	+	N-acetylglucosamine-6-phosphate deacetylase		gene	gene798	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0801
THEYE_A0802	THEYE_A0802	dksA	dksA	783858	784229	-	RNA polymerase-binding protein DksA	identified by match to protein family HMM PF01258%3B match to protein family HMM TIGR02420	gene	gene799	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0802
THEYE_A0803	THEYE_A0803	coaD	coaD	784337	784822	-	pantetheine-phosphate adenylyltransferase	identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510	gene	gene800	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0803
THEYE_A0804	THEYE_A0804		THEYE_A0804	784822	785337	-	N6-adenine-specific methylase	identified by match to protein family HMM PF03602	gene	gene801	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0804
THEYE_A0805	THEYE_A0805	purN	purN	785341	785991	-	phosphoribosylglycinamide formyltransferase	identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639	gene	gene802	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0805
THEYE_A0806	THEYE_A0806	hemE	hemE	785993	787009	-	uroporphyrinogen decarboxylase	identified by match to protein family HMM PF01208%3B match to protein family HMM TIGR01464	gene	gene803	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0806
THEYE_A0807	THEYE_A0807		THEYE_A0807	787006	788064	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene804	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0807
THEYE_A0808	THEYE_A0808		THEYE_A0808	788111	789652	+	sodium:neurotransmitter symporter family protein	identified by match to protein family HMM PF00209	gene	gene805	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0808
THEYE_A0809	THEYE_A0809	bioB	bioB	789665	790615	+	biotin synthase	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR00433	gene	gene806	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0809
THEYE_A0810	THEYE_A0810	bioW	bioW	790602	791339	+	6-carboxyhexanoate--CoA ligase	identified by match to protein family HMM PF03744%3B match to protein family HMM TIGR01204	gene	gene807	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0810
THEYE_A0811	THEYE_A0811		THEYE_A0811	791336	792229	+	conserved hypothetical protein	identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147	gene	gene808	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0811
THEYE_A0812	THEYE_A0812		THEYE_A0812	792201	792959	-	chemotaxis protein MotB	identified by match to protein family HMM PF00691	gene	gene809	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0812
THEYE_A0813	THEYE_A0813		THEYE_A0813	792949	793815	-	lateral flagellar motor protein MotA		gene	gene810	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0813
THEYE_A0814	THEYE_A0814		THEYE_A0814	793815	794351	-	type IV pilus assembly protein PilZ	identified by match to protein family HMM PF07238	gene	gene811	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0814
THEYE_A0815	THEYE_A0815		THEYE_A0815	794357	794998	-	chemotaxis protein MotB	identified by match to protein family HMM PF00691	gene	gene812	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0815
THEYE_A0816	THEYE_A0816		THEYE_A0816	794995	795756	-	chemotaxis MotA protein	identified by match to protein family HMM PF01618	gene	gene813	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0816
THEYE_A0817	THEYE_A0817	miaA	miaA	795813	796760	+	tRNA delta(2)-isopentenylpyrophosphate transferase	identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174	gene	gene814	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0817
THEYE_A0818	THEYE_A0818	rpsP	rpsP	796828	797064	+	ribosomal protein S16	identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002	gene	gene815	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0818
THEYE_A0819	THEYE_A0819		THEYE_A0819	797112	797348	+	conserved domain protein		gene	gene816	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0819
THEYE_A0820	THEYE_A0820	trmD	trmD	797407	798174	+	tRNA (guanine-N1)-methyltransferase	identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088	gene	gene817	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0820
THEYE_A0821	THEYE_A0821	rplS	rplS	798155	798517	+	ribosomal protein L19	identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024	gene	gene818	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0821
THEYE_A0822	THEYE_A0822	rnhB	rnhB	798514	799119	+	ribonuclease HII	identified by match to protein family HMM PF01351	gene	gene819	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0822
THEYE_A0823	THEYE_A0823	hypF	hypF	799123	801615	+	[NiFe] hydrogenase maturation protein HypF	identified by match to protein family HMM PF00708%3B match to protein family HMM PF01300%3B match to protein family HMM PF07503%3B match to protein family HMM TIGR00143	gene	gene820	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0823
THEYE_A0824	THEYE_A0824		THEYE_A0824	801612	802265	-	hypothetical protein	identified by glimmer%3B putative	gene	gene821	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0824
THEYE_A0825	THEYE_A0825		THEYE_A0825	802326	803348	+	potassium uptake protein%2C TrkA family	identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254%3B match to protein family HMM PF07885	gene	gene822	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0825
THEYE_A0826	THEYE_A0826		THEYE_A0826	803338	804594	-	3-deoxy-D-manno-octulosonic-acid transferase	identified by match to protein family HMM PF04413	gene	gene823	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0826
THEYE_A0827	THEYE_A0827	lpxB	lpxB	804576	805721	-	lipid-A-disaccharide synthase	identified by match to protein family HMM PF02684%3B match to protein family HMM TIGR00215	gene	gene824	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0827
THEYE_A0828	THEYE_A0828		THEYE_A0828	805703	806803	-	aminotransferase%2C DegT/DnrJ/EryC1/StrS family	identified by match to protein family HMM PF01041%3B match to protein family HMM PF01212	gene	gene825	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0828
THEYE_A0829	THEYE_A0829		THEYE_A0829	806809	807738	-	oxidoreductase%2C Gfo/Idh/MocA family	identified by match to protein family HMM PF01408	gene	gene826	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0829
THEYE_A0830	THEYE_A0830		THEYE_A0830	807728	808363	-	siroheme synthase	identified by match to protein family HMM TIGR01470	gene	gene827	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0830
THEYE_A0831	THEYE_A0831		THEYE_A0831	808364	809110	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM TIGR03302	gene	gene828	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0831
THEYE_A0832	THEYE_A0832		THEYE_A0832	809268	809774	-	conserved hypothetical protein		gene	gene829	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0832
THEYE_A0833	THEYE_A0833		THEYE_A0833	809747	810907	-	DNA-binding protein	identified by match to protein family HMM PF06114	gene	gene830	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0833
THEYE_A0834	THEYE_A0834		THEYE_A0834	811000	811557	-	hypothetical protein	identified by glimmer%3B putative	gene	gene831	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0834
THEYE_A0835	THEYE_A0835		THEYE_A0835	811636	813141	-	hypothetical conserved protein		gene	gene832	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0835
THEYE_A0836	THEYE_A0836		THEYE_A0836	813499	814329	-	putative transposase	identified by match to protein family HMM PF00665	gene	gene833	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0836
THEYE_A0837	THEYE_A0837		THEYE_A0837	814366	814653	-	ISCc3%2C transposase OrfA	identified by match to protein family HMM PF01527	gene	gene834	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0837
THEYE_A0838	THEYE_A0838		THEYE_A0838	814835	816046	-	pilin inverting protein%2C putative	identified by match to protein family HMM PF01548%3B match to protein family HMM PF02371	gene	gene835	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0838
THEYE_A0839	THEYE_A0839	moaE	moaE	816262	816612	+	molybdopterin converting factor%2C subunit 2	identified by match to protein family HMM PF02391	gene	gene836	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0839
THEYE_A0840	THEYE_A0840		THEYE_A0840	816593	817876	+	peptidase%2C M48 family	identified by match to protein family HMM PF00515%3B match to protein family HMM PF01435%3B match to protein family HMM PF07719	gene	gene837	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0840
THEYE_A0841	THEYE_A0841		THEYE_A0841	817889	818167	+	acylphosphatase	identified by match to protein family HMM PF00708	gene	gene838	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0841
THEYE_A0842	THEYE_A0842		THEYE_A0842	818471	818842	+	hypothetical conserved protein		gene	gene839	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0842
THEYE_A0843	THEYE_A0843		THEYE_A0843	818917	819204	+	ISCc3%2C transposase OrfA	identified by match to protein family HMM PF01527	gene	gene840	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0843
THEYE_A0844	THEYE_A0844		THEYE_A0844	819207	820067	+	putative transposase	identified by match to protein family HMM PF00665	gene	gene841	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0844
THEYE_A0845	THEYE_A0845		THEYE_A0845	820151	820678	+	conserved protein	identified by match to protein family HMM PF01661	gene	gene842	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0845
THEYE_A0846	THEYE_A0846		THEYE_A0846	820683	820759	+	tRNA-Thr		tRNA	gene843	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0846
THEYE_A0847	THEYE_A0847		THEYE_A0847	820757	821251	-	conserved hypothetical protein	identified by match to protein family HMM PF04308	gene	gene844	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0847
THEYE_A0848	THEYE_A0848		THEYE_A0848	821356	821430	+	tRNA-Gly		tRNA	gene845	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0848
THEYE_A0849	THEYE_A0849		THEYE_A0849	821447	822232	+	tRNA (Adenine-N(1)-)-methyltransferase (tRNA(m1A58)-methyltransferase) (tRNA(m1A58)MTase)	identified by match to protein family HMM PF08704	gene	gene846	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0849
THEYE_A0850	THEYE_A0850		THEYE_A0850	822229	823533	+	methyltransferase%2C putative	identified by match to protein family HMM PF04055	gene	gene847	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0850
THEYE_A0851	THEYE_A0851		THEYE_A0851	823543	823662	+	hypothetical protein	identified by glimmer%3B putative	gene	gene848	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0851
THEYE_A0852	THEYE_A0852		THEYE_A0852	823664	824329	+	MTA/SAH nucleosidase	identified by match to protein family HMM PF01048	gene	gene849	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0852
THEYE_A0853	THEYE_A0853		THEYE_A0853	824298	824804	-	O-linked GlcNAc transferase	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene850	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0853
THEYE_A0854	THEYE_A0854		THEYE_A0854	824825	825238	-	hypothetical protein	identified by glimmer%3B putative	gene	gene851	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0854
THEYE_A0855	THEYE_A0855		THEYE_A0855	825235	826137	-	tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase)	identified by match to protein family HMM PF02390	gene	gene852	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0855
THEYE_A0856	THEYE_A0856		THEYE_A0856	826141	826968	-	metalloprotease	identified by match to protein family HMM PF02163	gene	gene853	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0856
THEYE_A0857	THEYE_A0857		THEYE_A0857	826968	828245	-	conserved hypothetical protein	identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125	gene	gene854	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0857
THEYE_A0858	THEYE_A0858	thiL	thiL	828245	829246	-	thiamine-monophosphate kinase	identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01379	gene	gene855	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0858
THEYE_A0859	THEYE_A0859	lon	lon	829255	831669	-	ATP-dependent protease La	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763	gene	gene856	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0859
THEYE_A0860	THEYE_A0860	galU	galU	831754	832623	-	UTP-glucose-1-phosphate uridylyltransferase	identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099	gene	gene857	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0860
THEYE_A0861	THEYE_A0861		THEYE_A0861	832644	832732	-	tRNA-Leu		tRNA	gene858	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0861
THEYE_A0862	THEYE_A0862	ilvD	ilvD	832762	834414	-	dihydroxy-acid dehydratase	identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110	gene	gene859	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0862
THEYE_A0863	THEYE_A0863		THEYE_A0863	834411	834650	-	conserved hypothetical protein		gene	gene860	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0863
THEYE_A0864	THEYE_A0864		THEYE_A0864	834768	836171	+	hypothetical protein	identified by glimmer%3B putative	gene	gene861	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0864
THEYE_A0865	THEYE_A0865		THEYE_A0865	836186	836974	+	conserved hypothetical protein		gene	gene862	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0865
THEYE_A0866	THEYE_A0866		THEYE_A0866	836958	837731	-	conserved hypothetical protein	identified by match to protein family HMM TIGR02757	gene	gene863	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0866
THEYE_A0867	THEYE_A0867	leuC	leuC	837814	839079	+	3-isopropylmalate dehydratase%2C large subunit	identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR01343%3B match to protein family HMM TIGR02083%3B match to protein family HMM TIGR02086	gene	gene864	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0867
THEYE_A0868	THEYE_A0868		THEYE_A0868	839068	839547	-	conserved hypothetical protein%2C putative	identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043	gene	gene865	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0868
THEYE_A0869	THEYE_A0869		THEYE_A0869	839544	841055	-	HD domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM PF07698%3B match to protein family HMM TIGR00277	gene	gene866	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0869
THEYE_A0870	THEYE_A0870		THEYE_A0870	841024	841929	-	phosphate starvation-inducible protein	identified by match to protein family HMM PF02562	gene	gene867	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0870
THEYE_A0871	THEYE_A0871		THEYE_A0871	841989	842606	-	conserved hypothetical protein	identified by match to protein family HMM PF05036	gene	gene868	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0871
THEYE_A0872	THEYE_A0872		THEYE_A0872	842603	843640	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	identified by match to protein family HMM PF02547	gene	gene869	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0872
THEYE_A0873	THEYE_A0873		THEYE_A0873	843627	844613	-	cytoplasmic membrane protein	identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669%3B match to protein family HMM TIGR02870	gene	gene870	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0873
THEYE_A0874	THEYE_A0874		THEYE_A0874	844619	844834	-	conserved hypothetical protein		gene	gene871	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0874
THEYE_A0875	THEYE_A0875		THEYE_A0875	844827	845372	-	ncharacterized conserved protein	identified by match to protein family HMM PF02677	gene	gene872	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0875
THEYE_A0876	THEYE_A0876	ruvB	ruvB	845372	846349	-	holliday junction DNA helicase RuvB	identified by match to protein family HMM PF00004%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635	gene	gene873	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0876
THEYE_A0877	THEYE_A0877	ruvA	ruvA	846339	846911	-	holliday junction DNA helicase RuvA	identified by match to protein family HMM PF00633%3B match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084	gene	gene874	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0877
THEYE_A0878	THEYE_A0878		THEYE_A0878	847088	847858	+	toluene tolerance protein Ttg2B	identified by match to protein family HMM PF02405%3B match to protein family HMM TIGR00056	gene	gene875	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0878
THEYE_A0879	THEYE_A0879		THEYE_A0879	847855	848610	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene876	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0879
THEYE_A0880	THEYE_A0880		THEYE_A0880	848591	849034	+	ABC transporter substrate binding protein	identified by match to protein family HMM PF02470	gene	gene877	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0880
THEYE_A0881	THEYE_A0881		THEYE_A0881	849015	850376	+	outer membrane efflux protein%2C putative	identified by match to protein family HMM PF02321	gene	gene878	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0881
THEYE_A0882	THEYE_A0882		THEYE_A0882	850378	850986	+	toluene tolerance%2C Ttg2 superfamily	identified by match to protein family HMM PF05494	gene	gene879	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0882
THEYE_A0883	THEYE_A0883		THEYE_A0883	850987	851484	+	response regulator receiver domain protein	identified by match to protein family HMM PF00072	gene	gene880	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0883
THEYE_A0884	THEYE_A0884	valS	valS	851477	854308	+	valyl-tRNA synthetase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422	gene	gene881	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0884
THEYE_A0885	THEYE_A0885		THEYE_A0885	854318	854797	+	hypothetical protein	identified by glimmer%3B putative	gene	gene882	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0885
THEYE_A0886	THEYE_A0886	nadC	nadC	854797	855654	+	nicotinate-nucleotide pyrophosphorylase	identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078	gene	gene883	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0886
THEYE_A0887	THEYE_A0887	purM	purM	855651	856682	+	phosphoribosylformylglycinamidine cyclo-ligase	identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878	gene	gene884	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0887
THEYE_A0888	THEYE_A0888		THEYE_A0888	856679	857842	+	sensory box histidine kinase	identified by match to protein family HMM PF02518	gene	gene885	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0888
THEYE_A0889	THEYE_A0889		THEYE_A0889	857829	859238	+	response regulator HsfA	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene886	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0889
THEYE_A0890	THEYE_A0890		THEYE_A0890	859312	859479	-	hypothetical protein	identified by glimmer%3B putative	gene	gene887	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0890
THEYE_A0891	THEYE_A0891		THEYE_A0891	859480	862542	+	formate dehydrogenase%2C alpha subunit%2C selenocysteine-containing	Selenoprotein. identified by match to protein family HMM PF04879%3B match to protein family HMM TIGR01409	gene	gene888	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0891
THEYE_A0893	THEYE_A0893		THEYE_A0893	862553	863284	+	nitrate-inducible formate dehydrogenase%2C beta subunit	identified by match to protein family HMM PF00037	gene	gene889	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0893
THEYE_A0894	THEYE_A0894		THEYE_A0894	863327	864307	-	cofactor modifying protein%2C putative	identified by match to protein family HMM PF04055	gene	gene890	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0894
THEYE_A0895	THEYE_A0895		THEYE_A0895	865400	866569	-	periplasmic serine protease%2C putative	identified by match to protein family HMM PF00595	gene	gene891	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0895
THEYE_A0896	THEYE_A0896		THEYE_A0896	866536	867918	-	tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase)	identified by match to protein family HMM PF01171%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433	gene	gene892	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0896
THEYE_A0897	THEYE_A0897		THEYE_A0897	868159	868890	+	thiol:disulfide interchange protein%2C putative		gene	gene893	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0897
THEYE_A0898	THEYE_A0898		THEYE_A0898	868880	869770	-	transcriptional regulator	identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466	gene	gene894	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0898
THEYE_A0899	THEYE_A0899		THEYE_A0899	869802	870629	+	hypothetical protein	identified by glimmer%3B putative	gene	gene895	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0899
THEYE_A0900	THEYE_A0900	tatB	tatB	870645	870965	+	twin arginine-targeting protein translocase TatB	identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01410	gene	gene896	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0900
THEYE_A0901	THEYE_A0901	tatC	tatC	870972	871763	+	twin arginine-targeting protein translocase TatC	identified by match to protein family HMM PF00902%3B match to protein family HMM TIGR00945	gene	gene897	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0901
THEYE_A0902	THEYE_A0902		THEYE_A0902	871747	872010	+	hypothetical protein	identified by glimmer%3B putative	gene	gene898	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0902
THEYE_A0903	THEYE_A0903		THEYE_A0903	872007	873056	+	GTP-dependent nucleic acid-binding protein EngD	identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071	gene	gene899	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0903
THEYE_A0904	THEYE_A0904		THEYE_A0904	873067	874698	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene900	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0904
THEYE_A0905	THEYE_A0905		THEYE_A0905	874722	874817	+	tRNA-Ser		tRNA	gene901	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0905
THEYE_A0906	THEYE_A0906		THEYE_A0906	874829	875440	+	conserved hypothetical protein	identified by match to protein family HMM PF09335	gene	gene902	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0906
THEYE_A0907	THEYE_A0907		THEYE_A0907	875496	876068	+	pyruvate synthase subunit PorC	identified by match to protein family HMM PF01558%3B match to protein family HMM TIGR02175	gene	gene903	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0907
THEYE_A0908	THEYE_A0908		THEYE_A0908	876065	876352	+	pyruvate synthase subunit PorD	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR02179	gene	gene904	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0908
THEYE_A0909	THEYE_A0909		THEYE_A0909	876352	877533	+	pyruvate synthase subunit PorA	identified by match to protein family HMM PF01855	gene	gene905	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0909
THEYE_A0910	THEYE_A0910		THEYE_A0910	877535	878488	+	pyruvate synthase subunit PorB	identified by match to protein family HMM PF02775	gene	gene906	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0910
THEYE_A0911	THEYE_A0911		THEYE_A0911	878582	878959	+	NAD(P)H-quinone oxidoreductase chain 3%2C (NAD(P)H dehydrogenase%2C chain 3)	identified by match to protein family HMM PF00507	gene	gene907	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0911
THEYE_A0912	THEYE_A0912		THEYE_A0912	878956	879555	+	NADH-quinone oxidoreductase chain b 2	identified by match to protein family HMM PF01058%3B match to protein family HMM TIGR01957	gene	gene908	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0912
THEYE_A0913	THEYE_A0913		THEYE_A0913	879524	880057	+	NADH-quinone oxidoreductase chain c	identified by match to protein family HMM PF00329%3B match to protein family HMM TIGR01961	gene	gene909	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0913
THEYE_A0914	THEYE_A0914	nuoD1	nuoD1	880047	881240	+	NADH dehydrogenase i%2C d subunit	identified by match to protein family HMM PF00346%3B match to protein family HMM TIGR01962	gene	gene910	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0914
THEYE_A0915	THEYE_A0915		THEYE_A0915	881240	882241	+	NADH-quinone oxidoreductase chain h	identified by match to protein family HMM PF00146	gene	gene911	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0915
THEYE_A0916	THEYE_A0916		THEYE_A0916	882248	882844	+	NADH-ubiquinone oxidoreductase 23 kda subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01971	gene	gene912	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0916
THEYE_A0917	THEYE_A0917		THEYE_A0917	882828	883340	+	NADH-ubiquinone oxidoreductase chain 6	identified by match to protein family HMM PF00499	gene	gene913	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0917
THEYE_A0918	THEYE_A0918		THEYE_A0918	883337	883639	+	NADH-quinone oxidoreductase chain k	identified by match to protein family HMM PF00420	gene	gene914	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0918
THEYE_A0919	THEYE_A0919		THEYE_A0919	883641	885533	+	NADH-quinone oxidoreductase chain l	identified by match to protein family HMM PF00361%3B match to protein family HMM PF00662%3B match to protein family HMM TIGR01974	gene	gene915	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0919
THEYE_A0920	THEYE_A0920		THEYE_A0920	885543	887159	+	NADH-quinone oxidoreductase chain m	identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01972	gene	gene916	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0920
THEYE_A0921	THEYE_A0921		THEYE_A0921	887156	888532	+	NADH-quinone oxidoreductase chain n	identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01770	gene	gene917	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0921
THEYE_A0922	THEYE_A0922		THEYE_A0922	888613	889701	+	efflux transporter%2C RND family%2C MFP subunit	identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730	gene	gene918	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0922
THEYE_A0923	THEYE_A0923		THEYE_A0923	889703	892786	+	AcrB/AcrD/AcrF family protein	identified by match to protein family HMM PF00873	gene	gene919	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0923
THEYE_A0924	THEYE_A0924		THEYE_A0924	892824	893306	+	conserved protein	identified by match to protein family HMM PF04008	gene	gene920	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0924
THEYE_A0925	THEYE_A0925		THEYE_A0925	893303	894313	-	MoaA/nifB/pqqE family protein	identified by match to protein family HMM PF04055	gene	gene921	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0925
THEYE_A0926	THEYE_A0926		THEYE_A0926	894310	894558	-	hypothetical protein	identified by glimmer%3B putative	gene	gene922	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0926
THEYE_A0927	THEYE_A0927		THEYE_A0927	894951	895667	+	SAM-dependent methyltransferase	identified by match to protein family HMM PF05175	gene	gene923	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0927
THEYE_A0928	THEYE_A0928		THEYE_A0928	895712	896692	+	oligopeptide transport system permease protein AppB	identified by match to protein family HMM PF00528	gene	gene924	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0928
THEYE_A0929	THEYE_A0929		THEYE_A0929	896685	897524	+	oligopeptide transport system permease protein AppC	identified by match to protein family HMM PF00528	gene	gene925	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0929
THEYE_A0930	THEYE_A0930	lpxC	lpxC	897538	898416	-	UDP-3-0-acyl N-acetylglucosamine deacetylase	identified by match to protein family HMM PF03331%3B match to protein family HMM TIGR00325	gene	gene926	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0930
THEYE_A0931	THEYE_A0931		THEYE_A0931	898528	899883	-	protein TldD	identified by match to protein family HMM PF01523	gene	gene927	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0931
THEYE_A0932	THEYE_A0932	recN	recN	899919	901562	-	DNA repair protein RecN	identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634	gene	gene928	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0932
THEYE_A0933	THEYE_A0933	dapA	dapA	901595	902470	-	dihydrodipicolinate synthase	identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674	gene	gene929	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0933
THEYE_A0934	THEYE_A0934		THEYE_A0934	902557	903066	+	NADPH-flavin oxidoreductase	identified by match to protein family HMM PF00881	gene	gene930	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0934
THEYE_A0935	THEYE_A0935		THEYE_A0935	903126	903371	-	hypothetical protein	identified by glimmer%3B putative	gene	gene931	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0935
THEYE_A0936	THEYE_A0936		THEYE_A0936	903630	904784	+	soluble hydrogenase 42 kDa subunit	identified by match to protein family HMM PF00266	gene	gene932	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0936
THEYE_A0937	THEYE_A0937	serA	serA	904781	906370	+	D-3-phosphoglycerate dehydrogenase	identified by match to protein family HMM PF00389%3B match to protein family HMM PF01842%3B match to protein family HMM PF02826%3B match to protein family HMM TIGR01327	gene	gene933	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0937
THEYE_A0938	THEYE_A0938	purA	purA	906395	907672	+	adenylosuccinate synthetase	identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184	gene	gene934	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0938
THEYE_A0939	THEYE_A0939		THEYE_A0939	907641	908300	+	phosphoribosyltransferase		gene	gene935	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0939
THEYE_A0940	THEYE_A0940		THEYE_A0940	908297	909211	-	membrane protein%2C putative	identified by match to protein family HMM PF01925	gene	gene936	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0940
THEYE_A0941	THEYE_A0941		THEYE_A0941	909274	909522	-	redox-active disulfide protein 2	identified by match to protein family HMM TIGR00412	gene	gene937	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0941
THEYE_A0942	THEYE_A0942		THEYE_A0942	909558	911351	-	conserved protein		gene	gene938	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0942
THEYE_A0943	THEYE_A0943	trpF	trpF	911344	911997	-	N-(5'phosphoribosyl)anthranilate isomerase	identified by match to protein family HMM PF00697	gene	gene939	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0943
THEYE_A0944	THEYE_A0944		THEYE_A0944	911997	912431	-	conserved hypothetical protein		gene	gene940	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0944
THEYE_A0945	THEYE_A0945	rfaF	rfaF	912444	913442	-	lipopolysaccharide heptosyltransferase II	identified by match to protein family HMM PF01075%3B match to protein family HMM TIGR02195	gene	gene941	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0945
THEYE_A0946	THEYE_A0946		THEYE_A0946	913435	914874	-	ADP-heptose--LPS heptosyltransferase II	identified by match to protein family HMM PF01075%3B match to protein family HMM PF08645%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662%3B match to protein family HMM TIGR02195	gene	gene942	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0946
THEYE_A0947	THEYE_A0947		THEYE_A0947	914927	915166	+	hypothetical protein	identified by glimmer%3B putative	gene	gene943	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0947
THEYE_A0948	THEYE_A0948		THEYE_A0948	915167	916099	+	DppF	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene944	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0948
THEYE_A0949	THEYE_A0949		THEYE_A0949	916134	916280	-	hypothetical protein	identified by glimmer%3B putative	gene	gene945	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0949
THEYE_A0950	THEYE_A0950	rrs	rrs	916471	917963	+	16S ribosomal RNA		rRNA	gene946	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0950
THEYE_A0951	THEYE_A0951	rrl	rrl	918073	921028	+	23S ribosomal RNA		rRNA	gene947	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0951
THEYE_A0953	THEYE_A0953		THEYE_A0953	921190	922629	+	RNA polymerase sigma factor RpoD	identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937	gene	gene948	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0953
THEYE_A0954	THEYE_A0954		THEYE_A0954	922626	924452	+	transketolase	identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene949	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0954
THEYE_A0955	THEYE_A0955		THEYE_A0955	926497	927678	-	conserved hypothetical protein	identified by match to protein family HMM PF07075	gene	gene950	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0955
THEYE_A0956	THEYE_A0956		THEYE_A0956	927675	928862	-	protein TolB%2C putative	identified by match to protein family HMM PF07676	gene	gene951	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0956
THEYE_A0957	THEYE_A0957		THEYE_A0957	928859	929491	-	hypothetical protein	identified by glimmer%3B putative	gene	gene952	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0957
THEYE_A0958	THEYE_A0958		THEYE_A0958	929488	929892	-	TolR protein	identified by match to protein family HMM PF02472%3B match to protein family HMM TIGR02801	gene	gene953	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0958
THEYE_A0959	THEYE_A0959		THEYE_A0959	929880	930509	-	TolQ protein	identified by match to protein family HMM PF01618%3B match to protein family HMM TIGR02796	gene	gene954	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0959
THEYE_A0960	THEYE_A0960		THEYE_A0960	930644	931492	+	peptidase%2C M48 family	identified by match to protein family HMM PF01435	gene	gene955	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0960
THEYE_A0961	THEYE_A0961	purE	purE	931492	931989	+	phosphoribosylaminoimidazole carboxylase%2C catalytic subunit	identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162	gene	gene956	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0961
THEYE_A0962	THEYE_A0962		THEYE_A0962	932195	932500	+	conserved hypothetical protein		gene	gene957	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0962
THEYE_A0963	THEYE_A0963		THEYE_A0963	932497	933636	+	carbohydrate-selective porin%2C OprB family	identified by match to protein family HMM PF04966	gene	gene958	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0963
THEYE_A0964	THEYE_A0964		THEYE_A0964	933656	933883	+	FeoA family protein	identified by match to protein family HMM PF04023	gene	gene959	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0964
THEYE_A0965	THEYE_A0965		THEYE_A0965	933880	934107	+	conserved domain protein		gene	gene960	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0965
THEYE_A0966	THEYE_A0966	feoB1	feoB1	934104	936302	+	ferrous iron transport protein B	identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437	gene	gene961	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0966
THEYE_A0967	THEYE_A0967		THEYE_A0967	936729	937127	+	manganese-dependent transcription regulator	identified by match to protein family HMM PF01047%3B match to protein family HMM PF01325	gene	gene962	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0967
THEYE_A0968	THEYE_A0968		THEYE_A0968	937156	938064	-	cysteine synthase B (O-acetylserine sulfhydrylase B) (O-acetylserine (Thiol)-lyase B)	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136	gene	gene963	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0968
THEYE_A0969	THEYE_A0969	thyX	thyX	938078	938806	-	thymidylate synthase%2C flavin-dependent	identified by match to protein family HMM PF02511%3B match to protein family HMM TIGR02170	gene	gene964	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0969
THEYE_A0970	THEYE_A0970	hisB	hisB	938803	939378	-	imidazoleglycerol-phosphate dehydratase	identified by match to protein family HMM PF00475	gene	gene965	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0970
THEYE_A0971	THEYE_A0971	hisC1	hisC1	939381	940439	-	histidinol-phosphate aminotransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141	gene	gene966	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0971
THEYE_A0972	THEYE_A0972		THEYE_A0972	940508	941296	+	probable inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase)	identified by match to protein family HMM PF00459	gene	gene967	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0972
THEYE_A0973	THEYE_A0973		THEYE_A0973	941300	942199	+	cation efflux family protein	identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297	gene	gene968	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0973
THEYE_A0974	THEYE_A0974		THEYE_A0974	942713	943579	+	tetratricopeptide repeat domain protein		gene	gene969	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0974
THEYE_A0975	THEYE_A0975		THEYE_A0975	943581	945131	-	TPR domain protein		gene	gene970	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0975
THEYE_A0976	THEYE_A0976		THEYE_A0976	945128	945610	-	ErfK/YbiS/YcfS/YnhG	identified by match to protein family HMM PF03734	gene	gene971	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0976
THEYE_A0977	THEYE_A0977		THEYE_A0977	945597	946394	-	S-methyl-5-thioadenosine phosphorylase	identified by match to protein family HMM PF00896	gene	gene972	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0977
THEYE_A0978	THEYE_A0978		THEYE_A0978	946402	946478	-	tRNA-Arg		tRNA	gene973	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0978
THEYE_A0979	THEYE_A0979		THEYE_A0979	946499	946867	-	GTP cyclohydrolase I family enzyme	identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139	gene	gene974	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0979
THEYE_A0980	THEYE_A0980	hemH	hemH	946880	947803	-	ferrochelatase	identified by match to protein family HMM PF00762%3B match to protein family HMM TIGR00109	gene	gene975	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0980
THEYE_A0981	THEYE_A0981		THEYE_A0981	947796	948365	-	phenylacrylic acid decarboxylase	identified by match to protein family HMM PF02441%3B match to protein family HMM TIGR00421	gene	gene976	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0981
THEYE_A0982	THEYE_A0982		THEYE_A0982	948442	949299	+	3-hydroxyisobutyrate dehydrogenase	identified by match to protein family HMM PF03446	gene	gene977	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0982
THEYE_A0983	THEYE_A0983		THEYE_A0983	949312	950163	-	2-oxoacid:ferredoxin oxidoreductase subunit beta	identified by match to protein family HMM PF02775%3B match to protein family HMM TIGR02177	gene	gene978	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0983
THEYE_A0984	THEYE_A0984		THEYE_A0984	950141	951856	-	2-oxoglutarate ferredoxin oxidoreductase alpha subunit	identified by match to protein family HMM PF01558%3B match to protein family HMM PF01855	gene	gene979	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0984
THEYE_A0985	THEYE_A0985		THEYE_A0985	951856	952479	-	dissimilatory siroheme-sulfite reductase%2C gamma subunit-like protein	identified by match to protein family HMM TIGR03342	gene	gene980	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0985
THEYE_A0986	THEYE_A0986		THEYE_A0986	952489	953067	-	superoxide dismutase	identified by match to protein family HMM PF02777	gene	gene981	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0986
THEYE_A0987	THEYE_A0987		THEYE_A0987	953440	953907	-	hydrogenase maturation protease HycI	identified by match to protein family HMM PF01750%3B match to protein family HMM TIGR00072	gene	gene982	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0987
THEYE_A0988	THEYE_A0988		THEYE_A0988	953894	954364	-	hydrogenase-4 component I	identified by match to protein family HMM PF01058	gene	gene983	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0988
THEYE_A0989	THEYE_A0989		THEYE_A0989	954375	955832	-	Na+/H+ antiporter subunit%2C putative	identified by match to protein family HMM PF00361	gene	gene984	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0989
THEYE_A0990	THEYE_A0990		THEYE_A0990	955829	956473	-	hypothetical protein	identified by glimmer%3B putative	gene	gene985	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0990
THEYE_A0991	THEYE_A0991		THEYE_A0991	956475	957389	-	hydrogenase 4%2C component C or formate hydrogen lyase%2C subunit 4	identified by match to protein family HMM PF00146	gene	gene986	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0991
THEYE_A0992	THEYE_A0992		THEYE_A0992	957389	959449	-	hydrogenase 4%2C component B or formate hydrogen lyase%2C subunit 3%2C putative	identified by match to protein family HMM PF00361	gene	gene987	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0992
THEYE_A0993	THEYE_A0993		THEYE_A0993	959450	960901	-	hydrogenase-4 component D	identified by match to protein family HMM PF00361%3B match to protein family HMM PF00662	gene	gene988	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0993
THEYE_A0994	THEYE_A0994		THEYE_A0994	960911	961399	-	NAD(P)H-quinone oxidoreductase chain I%2C (NAD(P)H dehydrogenase%2C chain I)	identified by match to protein family HMM PF00037	gene	gene989	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0994
THEYE_A0995	THEYE_A0995		THEYE_A0995	961392	963017	-	hydrogenase-4 component G	identified by match to protein family HMM PF00329%3B match to protein family HMM PF00346	gene	gene990	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0995
THEYE_A0996	THEYE_A0996		THEYE_A0996	963395	963979	+	conserved hypothetical protein	identified by match to protein family HMM PF01206%3B match to protein family HMM TIGR03527	gene	gene991	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0996
THEYE_A0997	THEYE_A0997		THEYE_A0997	964022	964615	+	tetratricopeptide repeat family protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene992	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0997
THEYE_A0998	THEYE_A0998		THEYE_A0998	964612	965916	-	UDP-glucose 6-dehydrogenase	identified by match to protein family HMM PF00984%3B match to protein family HMM PF01210%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721%3B match to protein family HMM TIGR03026	gene	gene993	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0998
THEYE_A0999	THEYE_A0999		THEYE_A0999	966350	966429	-	tRNA-Glu		tRNA	gene994	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A0999
THEYE_A1000	THEYE_A1000		THEYE_A1000	966432	966509	-	tRNA-Lys		tRNA	gene995	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1000
THEYE_A1001	THEYE_A1001		THEYE_A1001	966576	966653	-	tRNA-Phe		tRNA	gene996	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1001
THEYE_A1002	THEYE_A1002		THEYE_A1002	966868	969000	-	amylopullulanase	identified by match to protein family HMM PF03065	gene	gene997	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1002
THEYE_A1003	THEYE_A1003		THEYE_A1003	968997	969326	-	septum formation initiator family protein	identified by match to protein family HMM PF04977	gene	gene998	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1003
THEYE_A1004	THEYE_A1004	eno	eno	969328	970608	-	phosphopyruvate hydratase	identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060	gene	gene999	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1004
THEYE_A1005	THEYE_A1005		THEYE_A1005	970634	971833	-	membrane protein%2C putative	identified by match to protein family HMM PF03600%3B match to protein family HMM PF04165	gene	gene1000	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1005
THEYE_A1006	THEYE_A1006	lpdA	lpdA	971830	973197	-	dihydrolipoamide dehydrogenase	identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350	gene	gene1001	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1006
THEYE_A1007	THEYE_A1007	gcvH	gcvH	973194	973586	-	glycine cleavage system H protein	identified by match to protein family HMM PF01597%3B match to protein family HMM TIGR00527	gene	gene1002	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1007
THEYE_A1008	THEYE_A1008	murA	murA	973706	974956	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072	gene	gene1003	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1008
THEYE_A1009	THEYE_A1009		THEYE_A1009	974995	977103	+	GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase)	identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691	gene	gene1004	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1009
THEYE_A1010	THEYE_A1010		THEYE_A1010	977089	977688	-	Sua5/YciO/YrdC/YwlC family protein	identified by match to protein family HMM PF01300%3B match to protein family HMM TIGR00057	gene	gene1005	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1010
THEYE_A1011	THEYE_A1011		THEYE_A1011	977669	979522	-	putative protein	identified by match to protein family HMM PF01841	gene	gene1006	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1011
THEYE_A1012	THEYE_A1012		THEYE_A1012	979494	980267	-	protein of unknown function	identified by match to protein family HMM PF01882	gene	gene1007	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1012
THEYE_A1013	THEYE_A1013		THEYE_A1013	980348	981277	-	MoxR family protein	identified by match to protein family HMM PF07726%3B match to protein family HMM PF07728	gene	gene1008	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1013
THEYE_A1014	THEYE_A1014		THEYE_A1014	981308	982207	-	manganese-dependent inorganic pyrophosphatase	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833	gene	gene1009	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1014
THEYE_A1015	THEYE_A1015	folK	folK	982307	982759	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498	gene	gene1010	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1015
THEYE_A1016	THEYE_A1016		THEYE_A1016	982854	983117	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1011	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1016
THEYE_A1017	THEYE_A1017		THEYE_A1017	983104	983313	+	conserved hypothetical protein		gene	gene1012	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1017
THEYE_A1018	THEYE_A1018		THEYE_A1018	983517	983939	+	OsmC/Ohr family protein	identified by match to protein family HMM PF02566	gene	gene1013	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1018
THEYE_A1019	THEYE_A1019	hypD	hypD	983936	984994	-	hydrogenase expression/formation protein HypD	identified by match to protein family HMM PF01924%3B match to protein family HMM TIGR00075	gene	gene1014	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1019
THEYE_A1020	THEYE_A1020		THEYE_A1020	984991	986037	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1015	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1020
THEYE_A1021	THEYE_A1021	secA	secA	986105	988747	+	preprotein translocase%2C SecA subunit	identified by match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963	gene	gene1016	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1021
THEYE_A1022	THEYE_A1022		THEYE_A1022	988744	989187	-	cupin domain protein	identified by match to protein family HMM PF07883	gene	gene1017	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1022
THEYE_A1023	THEYE_A1023		THEYE_A1023	989250	991232	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672%3B match to protein family HMM PF08269	gene	gene1018	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1023
THEYE_A1024	THEYE_A1024		THEYE_A1024	991233	992264	+	sorbitol dehydrogenase	identified by match to protein family HMM PF00107%3B match to protein family HMM PF08240	gene	gene1019	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1024
THEYE_A1025	THEYE_A1025		THEYE_A1025	992288	993490	-	radical SAM domain protein	identified by match to protein family HMM PF00633%3B match to protein family HMM PF04055	gene	gene1020	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1025
THEYE_A1026	THEYE_A1026	rpsU	rpsU	993596	993793	+	ribosomal protein S21	identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030	gene	gene1021	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1026
THEYE_A1027	THEYE_A1027		THEYE_A1027	993869	994825	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1022	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1027
THEYE_A1028	THEYE_A1028	dnaG	dnaG	994835	996535	+	DNA primase	identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391	gene	gene1023	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1028
THEYE_A1029	THEYE_A1029		THEYE_A1029	996528	997811	+	RNA polymerase sigma 70 factor	identified by match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02937	gene	gene1024	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1029
THEYE_A1030	THEYE_A1030		THEYE_A1030	997860	997936	+	tRNA-Met		tRNA	gene1025	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1030
THEYE_A1031	THEYE_A1031		THEYE_A1031	997957	998694	+	putative protein	identified by match to protein family HMM PF02591	gene	gene1026	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1031
THEYE_A1032	THEYE_A1032	rnhA	rnhA	998695	999093	+	RNase H	identified by match to protein family HMM PF00075	gene	gene1027	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1032
THEYE_A1033	THEYE_A1033		THEYE_A1033	999075	999989	+	ATPase%2C PP-loop superfamily	identified by match to protein family HMM PF01171	gene	gene1028	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1033
THEYE_A1034	THEYE_A1034		THEYE_A1034	999982	1000503	+	nitroreductase family protein	identified by match to protein family HMM PF00881	gene	gene1029	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1034
THEYE_A1035	THEYE_A1035		THEYE_A1035	1000500	1001291	+	inositol-1-monophosphatase	identified by match to protein family HMM PF00459	gene	gene1030	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1035
THEYE_A1036	THEYE_A1036		THEYE_A1036	1001284	1001646	-	conserved hypothetical protein		gene	gene1031	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1036
THEYE_A1037	THEYE_A1037		THEYE_A1037	1001633	1002580	-	pseudouridylate synthase%2C 23S RNA-specific	identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005	gene	gene1032	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1037
THEYE_A1038	THEYE_A1038	uvrA1	uvrA1	1002577	1005078	-	excinuclease ABC%2C A subunit	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630	gene	gene1033	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1038
THEYE_A1039	THEYE_A1039		THEYE_A1039	1005081	1006067	-	conserved hypothetical protein		gene	gene1034	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1039
THEYE_A1040	THEYE_A1040		THEYE_A1040	1006144	1010076	+	conserved hypothetical protein	identified by match to protein family HMM PF04357	gene	gene1035	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1040
THEYE_A1041	THEYE_A1041		THEYE_A1041	1010045	1012681	+	outer membrane protein%2C OMP85 family%2C putative	identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244%3B match to protein family HMM TIGR03303	gene	gene1036	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1041
THEYE_A1042	THEYE_A1042		THEYE_A1042	1012644	1013132	+	conserved hypothetical protein		gene	gene1037	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1042
THEYE_A1043	THEYE_A1043		THEYE_A1043	1013122	1013580	-	bifunctional protein argHA	identified by match to protein family HMM PF00583	gene	gene1038	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1043
THEYE_A1044	THEYE_A1044		THEYE_A1044	1013570	1014109	-	ketoisovalerate oxidoreductase subunit VorA	identified by match to protein family HMM PF01558	gene	gene1039	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1044
THEYE_A1045	THEYE_A1045		THEYE_A1045	1014094	1014840	-	ketoisovalerate oxidoreductase subunit VorA	identified by match to protein family HMM PF02775	gene	gene1040	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1045
THEYE_A1046	THEYE_A1046		THEYE_A1046	1014837	1015772	-	bifunctional 3-dehydroquinate synthase/phosphatase	identified by match to protein family HMM PF02541	gene	gene1041	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1046
THEYE_A1047	THEYE_A1047	proS	proS	1015759	1017474	-	prolyl-tRNA synthetase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409	gene	gene1042	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1047
THEYE_A1048	THEYE_A1048		THEYE_A1048	1017719	1018942	-	conserved hypothetical protein	identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579	gene	gene1043	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1048
THEYE_A1049	THEYE_A1049	miaB	miaB	1018939	1020234	-	tRNA-I(6)A37 thiotransferase enzyme MiaB	identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574	gene	gene1044	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1049
THEYE_A1050	THEYE_A1050		THEYE_A1050	1020318	1022303	+	sodium/hydrogen exchanger family/TrkA domain protein	identified by match to protein family HMM PF00999%3B match to protein family HMM PF02080%3B match to protein family HMM PF02254	gene	gene1045	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1050
THEYE_A1051	THEYE_A1051		THEYE_A1051	1022319	1022951	-	NADPH-dependent fmn reductase domain protein	identified by match to protein family HMM PF03358	gene	gene1046	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1051
THEYE_A1052	THEYE_A1052		THEYE_A1052	1023053	1024186	-	ser/thr protein phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene1047	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1052
THEYE_A1053	THEYE_A1053		THEYE_A1053	1024341	1024982	+	probable peroxiredoxin 2	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene1048	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1053
THEYE_A1054	THEYE_A1054		THEYE_A1054	1025070	1025165	-	tRNA-Ser		tRNA	gene1049	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1054
THEYE_A1055	THEYE_A1055		THEYE_A1055	1025187	1025504	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1050	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1055
THEYE_A1056	THEYE_A1056		THEYE_A1056	1025572	1025943	-	chain A%2C Cytochrome C3 From Desulfomicrobium Baculatus	identified by match to protein family HMM PF02085	gene	gene1051	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1056
THEYE_A1057	THEYE_A1057		THEYE_A1057	1025976	1026608	-	hydrogen sulfide production: membrane anchoring protein	identified by match to protein family HMM PF01292	gene	gene1052	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1057
THEYE_A1058	THEYE_A1058		THEYE_A1058	1026608	1028608	-	cytochrome c family protein%2C putative		gene	gene1053	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1058
THEYE_A1059	THEYE_A1059		THEYE_A1059	1028724	1029083	-	membrane protein%2C putative		gene	gene1054	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1059
THEYE_A1060	THEYE_A1060		THEYE_A1060	1029209	1030615	+	conserved hypothetical protein	identified by match to protein family HMM PF05140	gene	gene1055	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1060
THEYE_A1061	THEYE_A1061		THEYE_A1061	1030612	1031670	+	cytochrome c biogenesis protein%2C CcmF/CcyK/CcsA family	identified by match to protein family HMM PF01578%3B match to protein family HMM TIGR03144	gene	gene1056	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1061
THEYE_A1062	THEYE_A1062		THEYE_A1062	1031675	1032676	+	O-sialoglycoprotein endopeptidase	identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329	gene	gene1057	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1062
THEYE_A1063	THEYE_A1063	argG	argG	1032937	1034124	+	argininosuccinate synthase	identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032	gene	gene1058	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1063
THEYE_A1064	THEYE_A1064		THEYE_A1064	1034117	1035223	+	DNA processing protein DprA	identified by match to protein family HMM PF00633%3B match to protein family HMM PF02481%3B match to protein family HMM TIGR00732	gene	gene1059	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1064
THEYE_A1065	THEYE_A1065		THEYE_A1065	1035224	1035499	+	serine/threonine protein kinase		gene	gene1060	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1065
THEYE_A1066	THEYE_A1066	topA	topA	1035490	1037823	+	DNA topoisomerase I	identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051	gene	gene1061	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1066
THEYE_A1067	THEYE_A1067	srpB	srpB	1037762	1037861	+	Bacterial signal recognition particle RNA		gene	gene1062	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1067
THEYE_A1068	THEYE_A1068		THEYE_A1068	1037877	1039415	+	DNA polymerase III subunit gamma/tau	identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397	gene	gene1063	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1068
THEYE_A1069	THEYE_A1069		THEYE_A1069	1039408	1039752	+	conserved hypothetical protein	identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103	gene	gene1064	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1069
THEYE_A1070	THEYE_A1070	recR	recR	1039749	1040342	+	recombination protein RecR	identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615	gene	gene1065	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1070
THEYE_A1071	THEYE_A1071		THEYE_A1071	1040335	1041108	+	conserved hypothetical protein		gene	gene1066	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1071
THEYE_A1072	THEYE_A1072	rnr	rnr	1041105	1043192	+	ribonuclease R	identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063	gene	gene1067	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1072
THEYE_A1073	THEYE_A1073		THEYE_A1073	1043152	1043922	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1068	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1073
THEYE_A1074	THEYE_A1074		THEYE_A1074	1043941	1045785	-	magnesium-chelatase subunit ChlD	identified by match to protein family HMM PF00092%3B match to protein family HMM PF01078%3B match to protein family HMM PF07728	gene	gene1069	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1074
THEYE_A1075	THEYE_A1075		THEYE_A1075	1045763	1046773	-	magnesium-chelatase subunit ChlI		gene	gene1070	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1075
THEYE_A1077	THEYE_A1077		THEYE_A1077	1046770	1050704	-		putative cobalamin biosynthesis protein%2C authentic frameshift%3B this gene contains a frame shift which is not the result of sequencing error%3B identified by similarity to GB:AAM04311.1%3B match to protein family HMM PF02514	pseudogene	gene1071	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1077
THEYE_A1078	THEYE_A1078		THEYE_A1078	1050778	1050999	+	conserved domain protein	identified by match to protein family HMM PF03681	gene	gene1072	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1078
THEYE_A1079	THEYE_A1079		THEYE_A1079	1050992	1051234	+	conserved domain protein	identified by match to protein family HMM PF07927	gene	gene1073	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1079
THEYE_A1080	THEYE_A1080		THEYE_A1080	1051240	1052010	-	iron ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1074	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1080
THEYE_A1081	THEYE_A1081		THEYE_A1081	1052103	1053104	-	iron(III) ABC transporter%2C permease protein	identified by match to protein family HMM PF01032	gene	gene1075	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1081
THEYE_A1082	THEYE_A1082		THEYE_A1082	1053091	1054038	-	periplasmic binding protein	identified by match to protein family HMM PF01497	gene	gene1076	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1082
THEYE_A1083	THEYE_A1083		THEYE_A1083	1054056	1056272	-	TonB-dependent receptor	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene1077	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1083
THEYE_A1084	THEYE_A1084		THEYE_A1084	1056556	1057014	-	protein of unknown function	identified by match to protein family HMM PF01934	gene	gene1078	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1084
THEYE_A1085	THEYE_A1085		THEYE_A1085	1057007	1057411	-	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene1079	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1085
THEYE_A1086	THEYE_A1086		THEYE_A1086	1057541	1057930	-	conserved hypothetical protein	identified by match to protein family HMM PF01980%3B match to protein family HMM TIGR00104	gene	gene1080	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1086
THEYE_A1087	THEYE_A1087	cas6_3	cas6_3	1058213	1058947	+	CRISPR-associated protein Cas6	identified by match to protein family HMM PF01881%3B match to protein family HMM TIGR01877	gene	gene1081	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1087
THEYE_A1088	THEYE_A1088	cas3_1	cas3_1	1058944	1060575	+	CRISPR-associated helicase Cas3	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR01587	gene	gene1082	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1088
THEYE_A1089	THEYE_A1089		THEYE_A1089	1060553	1061278	+	CRISPR-associated HD domain protein	identified by match to protein family HMM TIGR01596	gene	gene1083	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1089
THEYE_A1090	THEYE_A1090		THEYE_A1090	1061529	1062506	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1084	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1090
THEYE_A1091	THEYE_A1091		THEYE_A1091	1062521	1063612	+	crispr-associated ramp protein	identified by match to protein family HMM PF03787	gene	gene1085	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1091
THEYE_A1092	THEYE_A1092		THEYE_A1092	1063609	1066560	+	crispr-associated protein%2C Csx11 family	identified by match to protein family HMM TIGR02682	gene	gene1086	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1092
THEYE_A1093	THEYE_A1093	cmr4	cmr4	1066574	1067518	+	CRISPR-associated RAMP protein%2C Cmr4 family	identified by match to protein family HMM PF03787%3B match to protein family HMM TIGR02580	gene	gene1087	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1093
THEYE_A1094	THEYE_A1094		THEYE_A1094	1067534	1067953	+	conserved hypothetical protein		gene	gene1088	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1094
THEYE_A1095	THEYE_A1095		THEYE_A1095	1067966	1068868	+	conserved protein%2C putative		gene	gene1089	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1095
THEYE_A1096	THEYE_A1096	csa5	csa5	1068862	1070283	+	CRISPR-associated protein%2C Csa5 family	identified by match to protein family HMM TIGR01878	gene	gene1090	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1096
THEYE_A1097	THEYE_A1097		THEYE_A1097	1070446	1070562	+	nucleotidyltransferase		gene	gene1091	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1097
THEYE_A1098	THEYE_A1098		THEYE_A1098	1070611	1071603	+	crispr-associated autoregulator devr family	identified by match to protein family HMM PF01905%3B match to protein family HMM TIGR01875	gene	gene1092	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1098
THEYE_A1099	THEYE_A1099	cas5_1	cas5_1	1071606	1072379	+	CRISPR-associated protein Cas5	identified by match to protein family HMM TIGR01874%3B match to protein family HMM TIGR02593	gene	gene1093	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1099
THEYE_A1100	THEYE_A1100	cas4_1	cas4_1	1072376	1072879	+	CRISPR-associated protein Cas4	identified by match to protein family HMM PF01930%3B match to protein family HMM TIGR00372	gene	gene1094	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1100
THEYE_A1101	THEYE_A1101	cas1_1	cas1_1	1072894	1073886	+	CRISPR-associated protein Cas1%2C HMARI/TNEAP subtype	identified by match to protein family HMM PF01867%3B match to protein family HMM TIGR00287%3B match to protein family HMM TIGR03641	gene	gene1095	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1101
THEYE_A1102	THEYE_A1102		THEYE_A1102	1073994	1074122	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1096	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1102
THEYE_A1103	THEYE_A1103		THEYE_A1103	1074369	1074872	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1097	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1103
THEYE_A1104	THEYE_A1104		THEYE_A1104	1074826	1074981	-	conserved hypothetical protein		gene	gene1098	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1104
THEYE_A1105	THEYE_A1105		THEYE_A1105	1075334	1075570	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1099	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1105
THEYE_A1106	THEYE_A1106	mfd	mfd	1076977	1080105	+	transcription-repair coupling factor	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00580	gene	gene1100	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1106
THEYE_A1107	THEYE_A1107		THEYE_A1107	1080102	1080830	+	TPR repeat	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1101	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1107
THEYE_A1108	THEYE_A1108	mviN	mviN	1080832	1082388	+	integral membrane protein MviN	identified by match to protein family HMM PF03023%3B match to protein family HMM TIGR01695	gene	gene1102	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1108
THEYE_A1109	THEYE_A1109		THEYE_A1109	1082385	1083014	+	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene1103	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1109
THEYE_A1110	THEYE_A1110		THEYE_A1110	1083001	1084647	+	phosphonate ABC transporter%2C periplasmic phosphonate-binding protein%2C putative	identified by match to protein family HMM TIGR01098	gene	gene1104	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1110
THEYE_A1111	THEYE_A1111		THEYE_A1111	1084610	1086220	+	two-component sensor histidine kinase	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1105	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1111
THEYE_A1112	THEYE_A1112		THEYE_A1112	1086223	1087563	+	acetoacetate metabolism regulatory protein AtoC	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene1106	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1112
THEYE_A1113	THEYE_A1113		THEYE_A1113	1087639	1089222	-	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015	gene	gene1107	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1113
THEYE_A1114	THEYE_A1114		THEYE_A1114	1089250	1090608	-	NAD(P)H-quinone oxidoreductase chain 2%2C (NAD(P)H dehydrogenase%2C chain 2)	identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01770	gene	gene1108	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1114
THEYE_A1115	THEYE_A1115		THEYE_A1115	1090605	1092044	-	NADH-quinone oxidoreductase chain m%2C putative	identified by match to protein family HMM PF00361%3B match to protein family HMM TIGR01972	gene	gene1109	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1115
THEYE_A1116	THEYE_A1116		THEYE_A1116	1092054	1093823	-	NADH-ubiquinone/plastoquinone	identified by match to protein family HMM PF00361	gene	gene1110	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1116
THEYE_A1117	THEYE_A1117		THEYE_A1117	1093816	1094031	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1111	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1117
THEYE_A1118	THEYE_A1118		THEYE_A1118	1094028	1095494	-	NADH dehydrogenase i l subunit	identified by match to protein family HMM PF00361	gene	gene1112	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1118
THEYE_A1119	THEYE_A1119		THEYE_A1119	1095498	1095803	-	NAD(P)H-quinone oxidoreductase chain 4L (NAD(P)Hdehydrogenase I%2C chain 4L)	identified by match to protein family HMM PF00420	gene	gene1113	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1119
THEYE_A1120	THEYE_A1120		THEYE_A1120	1095790	1096305	-	NADH-quinone oxidoreductase chain j	identified by match to protein family HMM PF00499	gene	gene1114	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1120
THEYE_A1121	THEYE_A1121		THEYE_A1121	1096302	1097297	-	NADH-quinone oxidoreductase chain h	identified by match to protein family HMM PF00146	gene	gene1115	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1121
THEYE_A1122	THEYE_A1122		THEYE_A1122	1097294	1097899	-	NADH-quinone oxidoreductase chain c 2	identified by match to protein family HMM PF00329%3B match to protein family HMM TIGR01961	gene	gene1116	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1122
THEYE_A1123	THEYE_A1123		THEYE_A1123	1097884	1098264	-	NADH-quinone oxidoreductase chain a	identified by match to protein family HMM PF00507	gene	gene1117	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1123
THEYE_A1124	THEYE_A1124		THEYE_A1124	1098264	1098827	-	NADH-quinone oxidoreductase%2C chain i subfamily%2C putative	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01971	gene	gene1118	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1124
THEYE_A1125	THEYE_A1125	nuoD2	nuoD2	1098824	1100029	-	NADH dehydrogenase i%2C d subunit	identified by match to protein family HMM PF00346%3B match to protein family HMM TIGR01962	gene	gene1119	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1125
THEYE_A1126	THEYE_A1126		THEYE_A1126	1100011	1100535	-	NADH-quinone oxidoreductase chain b 2	identified by match to protein family HMM PF01058%3B match to protein family HMM TIGR01957	gene	gene1120	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1126
THEYE_A1127	THEYE_A1127		THEYE_A1127	1100519	1101025	-	anaerobic dimethyl sulfoxide reductase chain B	identified by match to protein family HMM PF00037	gene	gene1121	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1127
THEYE_A1128	THEYE_A1128		THEYE_A1128	1101038	1103125	-	thiosulfate reductase	identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879	gene	gene1122	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1128
THEYE_A1129	THEYE_A1129		THEYE_A1129	1103138	1103527	-	conserved hypothetical protein		gene	gene1123	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1129
THEYE_A1130	THEYE_A1130		THEYE_A1130	1103530	1104774	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1124	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1130
THEYE_A1131	THEYE_A1131		THEYE_A1131	1104793	1105206	-	universal stress protein family	identified by match to protein family HMM PF00582	gene	gene1125	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1131
THEYE_A1132	THEYE_A1132		THEYE_A1132	1105364	1107307	-	aconitate hydratase%2C putative	identified by match to protein family HMM PF00330%3B match to protein family HMM PF00694%3B match to protein family HMM TIGR01342	gene	gene1126	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1132
THEYE_A1133	THEYE_A1133	lysA	lysA	1107506	1108762	+	diaminopimelate decarboxylase	identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784%3B match to protein family HMM TIGR01048	gene	gene1127	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1133
THEYE_A1134	THEYE_A1134	dapF	dapF	1108762	1109601	+	diaminopimelate epimerase	identified by match to protein family HMM PF01678%3B match to protein family HMM TIGR00652	gene	gene1128	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1134
THEYE_A1135	THEYE_A1135		THEYE_A1135	1109556	1112327	-	conserved hypothetical protein		gene	gene1129	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1135
THEYE_A1136	THEYE_A1136		THEYE_A1136	1115228	1115347	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1131	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1136
THEYE_A1137	THEYE_A1137		THEYE_A1137	1112332	1115379	-	UvrD/REP helicase domain protein%2C putative	identified by match to protein family HMM PF00580	gene	gene1130	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1137
THEYE_A1138	THEYE_A1138	ppdK	ppdK	1115423	1118143	-	pyruvate%2C phosphate dikinase	identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326%3B match to protein family HMM PF02896%3B match to protein family HMM TIGR01828	gene	gene1132	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1138
THEYE_A1139	THEYE_A1139		THEYE_A1139	1118260	1119420	+	methyltransferase small domain family	identified by match to protein family HMM PF01170%3B match to protein family HMM PF05175	gene	gene1133	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1139
THEYE_A1140	THEYE_A1140		THEYE_A1140	1119585	1120853	+	2-hydroxyglutaryl-CoA dehydratase%2C beta subunit-like protein	identified by match to protein family HMM PF06050	gene	gene1134	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1140
THEYE_A1141	THEYE_A1141		THEYE_A1141	1120850	1121641	+	activator of (R)-2-hydroxyglutaryl-CoA dehydratase	identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241	gene	gene1135	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1141
THEYE_A1142	THEYE_A1142		THEYE_A1142	1121622	1122425	+	sulfur transferase%2C putative	identified by match to protein family HMM PF00581	gene	gene1136	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1142
THEYE_A1143	THEYE_A1143		THEYE_A1143	1122479	1122688	+	molybdenum-binding protein	identified by match to protein family HMM PF03459	gene	gene1137	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1143
THEYE_A1144	THEYE_A1144	tpiA	tpiA	1122803	1123543	+	triosephosphate isomerase	identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419	gene	gene1138	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1144
THEYE_A1145	THEYE_A1145		THEYE_A1145	1123565	1123888	+	preprotein translocase%2C SecG subunit	identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810	gene	gene1139	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1145
THEYE_A1146	THEYE_A1146		THEYE_A1146	1123889	1125475	+	oligopeptide-binding protein AppA	identified by match to protein family HMM PF00496	gene	gene1140	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1146
THEYE_A1147	THEYE_A1147		THEYE_A1147	1125480	1126091	+	outer membrane lipoprotein carrier protein LolA	identified by match to protein family HMM PF03548	gene	gene1141	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1147
THEYE_A1148	THEYE_A1148	pdxA	pdxA	1126120	1127070	+	4-hydroxythreonine-4-phosphate dehydrogenase	identified by match to protein family HMM PF04166%3B match to protein family HMM TIGR00557	gene	gene1142	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1148
THEYE_A1149	THEYE_A1149		THEYE_A1149	1127070	1128170	+	NADH oxidase	identified by match to protein family HMM PF00724	gene	gene1143	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1149
THEYE_A1150	THEYE_A1150		THEYE_A1150	1128690	1130144	+	glutamyl-tRNA(Gln) amidotransferase subunit A	identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132	gene	gene1144	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1150
THEYE_A1151	THEYE_A1151		THEYE_A1151	1130155	1131582	+	glu-trnagln amidotransferase suBunit b	identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133	gene	gene1145	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1151
THEYE_A1152	THEYE_A1152		THEYE_A1152	1131587	1131826	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1146	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1152
THEYE_A1153	THEYE_A1153	ilvE	ilvE	1131831	1132745	-	branched-chain amino acid aminotransferase	identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01122	gene	gene1147	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1153
THEYE_A1154	THEYE_A1154		THEYE_A1154	1132891	1133190	-	conserved hypothetical protein		gene	gene1148	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1154
THEYE_A1155	THEYE_A1155		THEYE_A1155	1133442	1134428	-	NrfD	identified by match to protein family HMM PF03916	gene	gene1149	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1155
THEYE_A1156	THEYE_A1156		THEYE_A1156	1134428	1134985	-	NrfC protein	identified by match to protein family HMM PF00037	gene	gene1150	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1156
THEYE_A1157	THEYE_A1157		THEYE_A1157	1134987	1137179	-	thiosulfate reductase	identified by match to protein family HMM PF00384%3B match to protein family HMM PF01568%3B match to protein family HMM PF04879%3B match to protein family HMM TIGR01409	gene	gene1151	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1157
THEYE_A1158	THEYE_A1158		THEYE_A1158	1137283	1137747	+	cytochrome b6-F complex iron-sulfur subunit	identified by match to protein family HMM PF00355	gene	gene1152	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1158
THEYE_A1159	THEYE_A1159		THEYE_A1159	1137744	1138388	+	menaquinol-Cytochrome c reductase cytochrome b subunit	identified by match to protein family HMM PF00033	gene	gene1153	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1159
THEYE_A1160	THEYE_A1160		THEYE_A1160	1138385	1138744	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1154	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1160
THEYE_A1161	THEYE_A1161		THEYE_A1161	1139206	1140519	-	deoxyribodipyrimidine photo-lyase	identified by match to protein family HMM PF00875%3B match to protein family HMM PF03441	gene	gene1155	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1161
THEYE_A1162	THEYE_A1162		THEYE_A1162	1140512	1141426	-	conserved protein	identified by match to protein family HMM PF04463%3B match to protein family HMM PF08349	gene	gene1156	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1162
THEYE_A1163	THEYE_A1163		THEYE_A1163	1141450	1142265	+	GufA protein	identified by match to protein family HMM PF02535	gene	gene1157	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1163
THEYE_A1164	THEYE_A1164		THEYE_A1164	1142266	1142874	-	flavoprotein WrbA%2C protein	identified by match to protein family HMM PF00258%3B match to protein family HMM PF03358	gene	gene1158	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1164
THEYE_A1165	THEYE_A1165		THEYE_A1165	1142923	1144809	-	cytochrome c family protein		gene	gene1159	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1165
THEYE_A1167	THEYE_A1167		THEYE_A1167	1144861	1146213	-	putative sulfur transferase%2C selenocysteine-containing protein	Selenoprotein. identified by similarity to GB:AAR34257.1	gene	gene1160	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1167
THEYE_A1168	THEYE_A1168		THEYE_A1168	1146388	1146852	+	conserved hypothetical protein	identified by match to protein family HMM PF00581	gene	gene1161	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1168
THEYE_A1169	THEYE_A1169		THEYE_A1169	1146865	1147335	+	putative protein		gene	gene1162	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1169
THEYE_A1170	THEYE_A1170		THEYE_A1170	1147456	1147535	+	tRNA-Ile		tRNA	gene1163	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1170
THEYE_A1171	THEYE_A1171		THEYE_A1171	1147541	1147618	+	tRNA-Ala		tRNA	gene1164	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1171
THEYE_A1172	THEYE_A1172	cbiX	cbiX	1147640	1148017	-	sirohydrochlorin cobaltochelatase	identified by match to protein family HMM PF01903	gene	gene1165	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1172
THEYE_A1173	THEYE_A1173		THEYE_A1173	1148005	1148796	-	ABC-type Fe3+-siderophores transport system%2C periplasmic component%2C putative	identified by match to protein family HMM PF01497	gene	gene1166	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1173
THEYE_A1174	THEYE_A1174		THEYE_A1174	1148793	1149302	-	bifunctional adenosylcobalamin biosynthesis protein CobP	identified by match to protein family HMM PF02283	gene	gene1167	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1174
THEYE_A1175	THEYE_A1175		THEYE_A1175	1149304	1150344	-	probable Thr-phospho decarboxylase	identified by match to protein family HMM PF00155	gene	gene1168	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1175
THEYE_A1176	THEYE_A1176	cobD	cobD	1150372	1151349	-	cobalamin biosynthesis protein CobD	identified by match to protein family HMM PF03186%3B match to protein family HMM TIGR00380	gene	gene1169	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1176
THEYE_A1177	THEYE_A1177	cobQ	cobQ	1151346	1152827	-	cobyric acid synthase CobQ	identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313	gene	gene1170	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1177
THEYE_A1178	THEYE_A1178	cobS	cobS	1152812	1153594	-	cobalamin 5'-phosphate synthase	identified by match to protein family HMM PF02654%3B match to protein family HMM TIGR00317	gene	gene1171	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1178
THEYE_A1179	THEYE_A1179		THEYE_A1179	1153584	1154627	-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase)	identified by match to protein family HMM PF02277%3B match to protein family HMM TIGR03160	gene	gene1172	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1179
THEYE_A1180	THEYE_A1180		THEYE_A1180	1154765	1154887	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1173	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1180
THEYE_A1181	THEYE_A1181		THEYE_A1181	1155004	1155663	-	domain of unknown function%2C putative	identified by match to protein family HMM PF01902%3B match to protein family HMM TIGR00290	gene	gene1174	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1181
THEYE_A1182	THEYE_A1182		THEYE_A1182	1155651	1157615	-	TonB-dependent receptor-related protein	identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715	gene	gene1175	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1182
THEYE_A1183	THEYE_A1183		THEYE_A1183	1158342	1158653	+	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene1176	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1183
THEYE_A1184	THEYE_A1184		THEYE_A1184	1158650	1159000	+	nucleotidyltransferase	identified by match to protein family HMM PF01934	gene	gene1177	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1184
THEYE_A1185	THEYE_A1185		THEYE_A1185	1159204	1159416	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1178	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1185
THEYE_A1186	THEYE_A1186		THEYE_A1186	1159779	1160447	+	DNA repair protein RadC	identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608	gene	gene1179	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1186
THEYE_A1187	THEYE_A1187		THEYE_A1187	1160633	1160932	+	conserved hypothetical protein		gene	gene1180	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1187
THEYE_A1188	THEYE_A1188		THEYE_A1188	1160934	1161140	+	conserved hypothetical protein		gene	gene1181	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1188
THEYE_A1189	THEYE_A1189		THEYE_A1189	1161183	1163237	+	modification methylase	identified by match to protein family HMM PF01555	gene	gene1182	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1189
THEYE_A1190	THEYE_A1190		THEYE_A1190	1163240	1165819	+	type III restriction enzyme%2C res subunit family	identified by match to protein family HMM PF04851	gene	gene1183	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1190
THEYE_A1191	THEYE_A1191	ssrA	ssrA	1165827	1166175	-			tmRNA	gene1184	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1191
THEYE_A1193	THEYE_A1193	smpB	smpB	1166186	1166635	-	SsrA-binding protein	identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086	gene	gene1185	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1193
THEYE_A1194	THEYE_A1194		THEYE_A1194	1166673	1166858	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1186	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1194
THEYE_A1195	THEYE_A1195		THEYE_A1195	1166867	1167994	-	aminopeptidase		gene	gene1187	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1195
THEYE_A1196	THEYE_A1196	purF	purF	1167991	1169403	-	amidophosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134	gene	gene1188	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1196
THEYE_A1197	THEYE_A1197		THEYE_A1197	1169476	1173567	+	probable phosphoenolpyruvate synthase/pyruvate phosphate dikinase	identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326	gene	gene1189	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1197
THEYE_A1198	THEYE_A1198		THEYE_A1198	1173588	1174814	+	glyceraldehyde-3-phosphate dehydrogenase 2 (gapdh)(nad(p)-dependent glyceraldehyde-3-phosphate dehydrogenase)	identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800	gene	gene1190	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1198
THEYE_A1199	THEYE_A1199		THEYE_A1199	1174846	1175151	+	conserved hypothetical protein	identified by match to protein family HMM PF01910%3B match to protein family HMM TIGR00106	gene	gene1191	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1199
THEYE_A1200	THEYE_A1200		THEYE_A1200	1175148	1175984	+	universal stress protein%2C putative	identified by match to protein family HMM PF00582	gene	gene1192	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1200
THEYE_A1201	THEYE_A1201		THEYE_A1201	1176006	1176440	+	mosc domain protein	identified by match to protein family HMM PF03473	gene	gene1193	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1201
THEYE_A1202	THEYE_A1202		THEYE_A1202	1176437	1176919	+	molybdopterin biosynthesis mog protein	identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177	gene	gene1194	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1202
THEYE_A1203	THEYE_A1203		THEYE_A1203	1176916	1177593	+	C-type cytochrome biogenesis protein	identified by match to protein family HMM PF02683	gene	gene1195	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1203
THEYE_A1204	THEYE_A1204	leuS	leuS	1177649	1180255	+	leucyl-tRNA synthetase	identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396	gene	gene1196	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1204
THEYE_A1205	THEYE_A1205		THEYE_A1205	1180252	1180536	+	conserved hypothetical protein		gene	gene1197	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1205
THEYE_A1206	THEYE_A1206		THEYE_A1206	1180521	1180754	+	conserved hypothetical protein		gene	gene1198	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1206
THEYE_A1207	THEYE_A1207		THEYE_A1207	1180759	1181205	+	conserved hypothetical protein		gene	gene1199	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1207
THEYE_A1208	THEYE_A1208		THEYE_A1208	1181168	1181620	+	protein of unknown function	identified by match to protein family HMM PF01934	gene	gene1200	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1208
THEYE_A1209	THEYE_A1209		THEYE_A1209	1181617	1182147	+	lipoprotein%2C putative		gene	gene1201	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1209
THEYE_A1210	THEYE_A1210		THEYE_A1210	1182153	1183004	+	DNA polymerase III%2C delta subunit superfamily	identified by match to protein family HMM PF06144	gene	gene1202	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1210
THEYE_A1211	THEYE_A1211		THEYE_A1211	1183025	1183417	+	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene1203	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1211
THEYE_A1212	THEYE_A1212		THEYE_A1212	1183638	1183799	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1204	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1212
THEYE_A1213	THEYE_A1213		THEYE_A1213	1183786	1185105	-	chlorohydrolase family protein	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969	gene	gene1205	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1213
THEYE_A1214	THEYE_A1214		THEYE_A1214	1185115	1186011	-	4-hydroxybenzoate polyprenyltransferase%2C putative	identified by match to protein family HMM PF01040%3B match to protein family HMM TIGR01475	gene	gene1206	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1214
THEYE_A1215	THEYE_A1215		THEYE_A1215	1186545	1186670	+	conserved hypothetical protein		gene	gene1207	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1215
THEYE_A1216	THEYE_A1216		THEYE_A1216	1186881	1188344	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1208	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1216
THEYE_A1217	THEYE_A1217		THEYE_A1217	1188710	1189438	-	putative transposase	identified by match to protein family HMM PF00665	gene	gene1209	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1217
THEYE_A1218	THEYE_A1218		THEYE_A1218	1189441	1189728	-	ISCc3%2C transposase OrfA	identified by match to protein family HMM PF01527	gene	gene1210	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1218
THEYE_A1219	THEYE_A1219		THEYE_A1219	1189764	1190357	-	probable transposase%2C putative		gene	gene1211	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1219
THEYE_A1220	THEYE_A1220		THEYE_A1220	1190517	1190593	+	tRNA-Val		tRNA	gene1212	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1220
THEYE_A1221	THEYE_A1221		THEYE_A1221	1190968	1191846	+	foldase protein PrsA 1%2C putative	identified by match to protein family HMM PF00639	gene	gene1213	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1221
THEYE_A1222	THEYE_A1222		THEYE_A1222	1193120	1193242	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1215	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1222
THEYE_A1223	THEYE_A1223	trmE	trmE	1191847	1193229	-	tRNA modification GTPase TrmE	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450%3B match to protein family HMM TIGR00650	gene	gene1214	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1223
THEYE_A1224	THEYE_A1224		THEYE_A1224	1193226	1194767	-	inner membrane protein OxaA	identified by match to protein family HMM PF02096	gene	gene1216	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1224
THEYE_A1225	THEYE_A1225		THEYE_A1225	1194772	1194996	-	conserved hypothetical protein	identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278	gene	gene1217	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1225
THEYE_A1226	THEYE_A1226	rpmH	rpmH	1194978	1195118	-	ribosomal protein L34	identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030	gene	gene1218	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1226
THEYE_A1227	THEYE_A1227	rpmI	rpmI	1195132	1195332	-	ribosomal protein L35	identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001	gene	gene1219	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1227
THEYE_A1228	THEYE_A1228		THEYE_A1228	1195389	1195715	-	translation initiation factor IF-3%2C C-terminal domain	identified by match to protein family HMM PF00707	gene	gene1220	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1228
THEYE_A1229	THEYE_A1229	thrS	thrS	1195913	1197766	-	threonyl-tRNA synthetase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418	gene	gene1221	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1229
THEYE_A1230	THEYE_A1230		THEYE_A1230	1197864	1198565	-	lipoprotein-releasing system ATP-binding protein LolD	identified by match to protein family HMM PF00005	gene	gene1222	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1230
THEYE_A1231	THEYE_A1231		THEYE_A1231	1198531	1198782	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1223	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1231
THEYE_A1232	THEYE_A1232		THEYE_A1232	1198783	1199988	-	ABC transporter%2C permease protein	identified by match to protein family HMM PF02687%3B match to protein family HMM TIGR02212	gene	gene1224	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1232
THEYE_A1233	THEYE_A1233	lysS	lysS	1199985	1201469	-	lysyl-tRNA synthetase	identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499	gene	gene1225	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1233
THEYE_A1234	THEYE_A1234		THEYE_A1234	1201509	1201588	-	tRNA-Pro		tRNA	gene1226	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1234
THEYE_A1235	THEYE_A1235		THEYE_A1235	1201590	1201931	-	transcription regulator protein	identified by match to protein family HMM PF00376	gene	gene1227	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1235
THEYE_A1236	THEYE_A1236		THEYE_A1236	1201933	1202217	-	integration host factor alpha-subunit	identified by match to protein family HMM PF00216	gene	gene1228	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1236
THEYE_A1237	THEYE_A1237		THEYE_A1237	1202439	1202969	+	PyrR bifunctional protein	identified by match to protein family HMM PF00156	gene	gene1229	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1237
THEYE_A1238	THEYE_A1238	pyrB	pyrB	1202966	1203874	+	aspartate carbamoyltransferase	identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670	gene	gene1230	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1238
THEYE_A1239	THEYE_A1239		THEYE_A1239	1203875	1205182	+	dihydroorotase	identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857	gene	gene1231	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1239
THEYE_A1240	THEYE_A1240	carA	carA	1205182	1206273	+	carbamoyl-phosphate synthase%2C small subunit	identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368	gene	gene1232	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1240
THEYE_A1241	THEYE_A1241		THEYE_A1241	1206326	1206565	+	Wsv483%2C putative		gene	gene1233	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1241
THEYE_A1242	THEYE_A1242	carB	carB	1206567	1209884	+	carbamoyl-phosphate synthase%2C large subunit	identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01369	gene	gene1234	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1242
THEYE_A1243	THEYE_A1243	purH	purH	1209881	1211449	+	bifunctional purine biosynthesis protein PurH	identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355	gene	gene1235	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1243
THEYE_A1244	THEYE_A1244		THEYE_A1244	1211451	1212341	+	conserved hypothetical protein		gene	gene1236	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1244
THEYE_A1245	THEYE_A1245	purD	purD	1212338	1213603	+	phosphoribosylamine--glycine ligase	identified by match to protein family HMM PF01071%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877	gene	gene1237	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1245
THEYE_A1246	THEYE_A1246		THEYE_A1246	1213625	1213710	+	tRNA-Leu		tRNA	gene1238	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1246
THEYE_A1247	THEYE_A1247		THEYE_A1247	1213688	1214473	-	cell cycle histidine kinase CckA	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1239	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1247
THEYE_A1248	THEYE_A1248		THEYE_A1248	1214382	1214852	-	sensor histidine kinase%2C putative		gene	gene1240	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1248
THEYE_A1249	THEYE_A1249		THEYE_A1249	1215103	1215861	-	nodulation protein J	identified by match to protein family HMM PF01061	gene	gene1241	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1249
THEYE_A1250	THEYE_A1250		THEYE_A1250	1215863	1216585	-	Nod factor export ATP-binding protein I	identified by match to protein family HMM PF00005	gene	gene1242	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1250
THEYE_A1251	THEYE_A1251		THEYE_A1251	1216650	1217114	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1243	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1251
THEYE_A1252	THEYE_A1252	moaC	moaC	1217111	1217581	-	molybdenum cofactor biosynthesis protein C	identified by match to protein family HMM PF01967%3B match to protein family HMM TIGR00581	gene	gene1244	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1252
THEYE_A1253	THEYE_A1253		THEYE_A1253	1217611	1218345	-	clavaldehyde dehydrogenase	identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659	gene	gene1245	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1253
THEYE_A1254	THEYE_A1254		THEYE_A1254	1218332	1219858	-	multidrug resistance protein B	identified by match to protein family HMM PF07690%3B match to protein family HMM TIGR00711	gene	gene1246	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1254
THEYE_A1255	THEYE_A1255	rpsT	rpsT	1219987	1220295	-	ribosomal protein S20	identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029	gene	gene1247	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1255
THEYE_A1256	THEYE_A1256		THEYE_A1256	1220478	1221284	+	conserved hypothetical protein	identified by match to protein family HMM PF02642	gene	gene1248	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1256
THEYE_A1257	THEYE_A1257		THEYE_A1257	1221275	1222969	+	alpha-glucan phosphorylase	identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02094	gene	gene1249	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1257
THEYE_A1258	THEYE_A1258		THEYE_A1258	1222973	1223716	-	bacterial Peptidase A24 N-terminal domain family	identified by match to protein family HMM PF01478%3B match to protein family HMM PF06750	gene	gene1250	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1258
THEYE_A1259	THEYE_A1259		THEYE_A1259	1223704	1224024	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1251	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1259
THEYE_A1260	THEYE_A1260		THEYE_A1260	1224025	1225374	-	deoxyribonuclease%2C TatD family	identified by match to protein family HMM PF01026%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00010	gene	gene1252	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1260
THEYE_A1261	THEYE_A1261		THEYE_A1261	1225371	1226573	-	2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase	identified by match to protein family HMM PF01676%3B match to protein family HMM TIGR00306	gene	gene1253	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1261
THEYE_A1262	THEYE_A1262		THEYE_A1262	1226692	1227486	+	amidohydrolase family protein%2C putative	identified by match to protein family HMM PF04909	gene	gene1254	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1262
THEYE_A1263	THEYE_A1263	yihY	yihY	1227477	1228274	+	YihY family protein	identified by match to protein family HMM PF03631%3B match to protein family HMM TIGR00765	gene	gene1255	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1263
THEYE_A1264	THEYE_A1264	thiD	thiD	1228271	1229035	+	phosphomethylpyrimidine kinase	identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097	gene	gene1256	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1264
THEYE_A1265	THEYE_A1265	purC	purC	1229048	1229926	+	phosphoribosylaminoimidazole-succinocarboxamide synthase	identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081	gene	gene1257	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1265
THEYE_A1266	THEYE_A1266		THEYE_A1266	1229907	1230749	-	DNA-(Apurinic or apyrimidinic site) lyase	identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00587	gene	gene1258	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1266
THEYE_A1267	THEYE_A1267		THEYE_A1267	1230912	1230987	-	tRNA-Cys		tRNA	gene1259	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1267
THEYE_A1268	THEYE_A1268		THEYE_A1268	1230993	1231068	-	tRNA-Gly		tRNA	gene1260	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1268
THEYE_A1269	THEYE_A1269		THEYE_A1269	1231070	1231303	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1261	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1269
THEYE_A1270	THEYE_A1270		THEYE_A1270	1231437	1232210	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1262	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1270
THEYE_A1271	THEYE_A1271		THEYE_A1271	1232182	1232940	-	DUF72	identified by match to protein family HMM PF01904	gene	gene1263	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1271
THEYE_A1272	THEYE_A1272		THEYE_A1272	1232913	1233905	-	dTDP-glucose 4%2C6-dehydratase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene1264	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1272
THEYE_A1273	THEYE_A1273		THEYE_A1273	1234012	1234260	+	type I antifreeze protein	identified by match to protein family HMM TIGR02605	gene	gene1265	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1273
THEYE_A1274	THEYE_A1274		THEYE_A1274	1234261	1235019	+	AP endonuclease%2C family 2	identified by match to protein family HMM PF01261	gene	gene1266	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1274
THEYE_A1275	THEYE_A1275	ilvB	ilvB	1235071	1236801	+	acetolactate synthase%2C large subunit%2C biosynthetic type	identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118	gene	gene1267	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1275
THEYE_A1276	THEYE_A1276	ilvN	ilvN	1236811	1237302	+	acetolactate synthase%2C small subunit	identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119	gene	gene1268	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1276
THEYE_A1277	THEYE_A1277		THEYE_A1277	1237326	1238567	+	2-isopropylmalate synthase 2	identified by match to protein family HMM PF00682	gene	gene1269	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1277
THEYE_A1278	THEYE_A1278		THEYE_A1278	1238582	1239664	+	isocitrate dehydrogenase [NADP] (oxalosuccinatedecarboxylase) (idh) (nadp(+)-specific icdh)	identified by match to protein family HMM PF00180	gene	gene1270	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1278
THEYE_A1279	THEYE_A1279		THEYE_A1279	1239791	1241089	+	CBS domain protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471	gene	gene1271	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1279
THEYE_A1280	THEYE_A1280		THEYE_A1280	1241076	1242257	-	polysulphide reductase%2C NrfD superfamily	identified by match to protein family HMM PF03916	gene	gene1272	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1280
THEYE_A1281	THEYE_A1281		THEYE_A1281	1242244	1243212	-	iron-sulfur protein	identified by match to protein family HMM PF00037	gene	gene1273	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1281
THEYE_A1282	THEYE_A1282		THEYE_A1282	1243221	1243337	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1274	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1282
THEYE_A1283	THEYE_A1283		THEYE_A1283	1243324	1244895	-	high-molecular-weight cytochrome C	identified by match to protein family HMM PF02085	gene	gene1275	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1283
THEYE_A1284	THEYE_A1284		THEYE_A1284	1244892	1246232	-	ferredoxin%2C 4Fe-4S%2C putative	identified by match to protein family HMM PF00037%3B match to protein family HMM PF02754	gene	gene1276	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1284
THEYE_A1285	THEYE_A1285		THEYE_A1285	1246234	1246911	-	membrane protein%2C putative		gene	gene1277	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1285
THEYE_A1286	THEYE_A1286		THEYE_A1286	1246911	1248164	-	conserved hypothetical protein		gene	gene1278	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1286
THEYE_A1287	THEYE_A1287		THEYE_A1287	1248346	1248495	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1279	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1287
THEYE_A1288	THEYE_A1288		THEYE_A1288	1248965	1250383	+	heme biosynthesis (NirJ-2) family protein%2C putative	identified by match to protein family HMM PF04055	gene	gene1280	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1288
THEYE_A1289	THEYE_A1289		THEYE_A1289	1250423	1250743	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1281	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1289
THEYE_A1290	THEYE_A1290		THEYE_A1290	1251122	1251352	+	conserved domain protein	identified by match to protein family HMM PF04023	gene	gene1282	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1290
THEYE_A1291	THEYE_A1291	feoB2	feoB2	1251349	1253259	+	ferrous iron transport protein B	identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437	gene	gene1283	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1291
THEYE_A1292	THEYE_A1292		THEYE_A1292	1253416	1254945	+	GTP-binding protein	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03156	gene	gene1284	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1292
THEYE_A1293	THEYE_A1293		THEYE_A1293	1254923	1255432	-	conserved hypothetical protein	identified by match to protein family HMM PF01871%3B match to protein family HMM TIGR00296	gene	gene1285	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1293
THEYE_A1294	THEYE_A1294		THEYE_A1294	1255526	1255601	+	tRNA-Gln		tRNA	gene1286	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1294
THEYE_A1295	THEYE_A1295		THEYE_A1295	1255608	1255685	+	tRNA-Glu		tRNA	gene1287	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1295
THEYE_A1296	THEYE_A1296		THEYE_A1296	1255710	1256639	+	LysM domain protein	identified by match to protein family HMM PF03734	gene	gene1288	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1296
THEYE_A1297	THEYE_A1297		THEYE_A1297	1256651	1256959	-	lipoprotein%2C putative		gene	gene1289	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1297
THEYE_A1298	THEYE_A1298	ribD	ribD	1257015	1258127	-	riboflavin biosynthesis protein RibD	identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326	gene	gene1290	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1298
THEYE_A1299	THEYE_A1299	scpB	scpB	1258222	1258773	+	segregation and condensation protein B	identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281	gene	gene1291	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1299
THEYE_A1300	THEYE_A1300		THEYE_A1300	1258787	1259725	+	probable endopeptidase LytE	identified by match to protein family HMM PF00877%3B match to protein family HMM PF01476	gene	gene1292	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1300
THEYE_A1301	THEYE_A1301		THEYE_A1301	1259722	1261653	-	molybdenum cofactor biosynthesis protein	identified by match to protein family HMM PF00994%3B match to protein family HMM PF03453%3B match to protein family HMM PF03454%3B match to protein family HMM TIGR00177	gene	gene1293	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1301
THEYE_A1302	THEYE_A1302		THEYE_A1302	1261653	1262390	-	formate dehydrogenase accessory protein FdhE%2C putative		gene	gene1294	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1302
THEYE_A1303	THEYE_A1303		THEYE_A1303	1262413	1263492	-	cytochrome c551 peroxidase	identified by match to protein family HMM PF03150	gene	gene1295	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1303
THEYE_A1305	THEYE_A1305		THEYE_A1305	1263476	1264078	-	disulfide bond formation protein D%2C selenocysteine-containing	Selenoprotein. identified by similarity to SP:O32218	gene	gene1296	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1305
THEYE_A1306	THEYE_A1306		THEYE_A1306	1264166	1264242	-	tRNA-Arg		tRNA	gene1297	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1306
THEYE_A1307	THEYE_A1307		THEYE_A1307	1264364	1265668	+	cytochrome D ubiquinol oxidase subunit I	identified by match to protein family HMM PF01654	gene	gene1298	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1307
THEYE_A1308	THEYE_A1308	cydB	cydB	1265671	1266693	+	cytochrome D ubiquinol oxidase%2C subunit II	identified by match to protein family HMM PF02322%3B match to protein family HMM TIGR00203	gene	gene1299	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1308
THEYE_A1309	THEYE_A1309		THEYE_A1309	1266611	1267105	+	Rrf2 family protein	identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738	gene	gene1300	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1309
THEYE_A1310	THEYE_A1310		THEYE_A1310	1267100	1267645	-	HD domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277	gene	gene1301	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1310
THEYE_A1311	THEYE_A1311		THEYE_A1311	1267658	1268860	-	permeases of the major facilitator superfamily	identified by match to protein family HMM PF05977%3B match to protein family HMM PF07690	gene	gene1302	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1311
THEYE_A1312	THEYE_A1312		THEYE_A1312	1270054	1271433	+	metallo-beta-lactamase superfamily	identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521	gene	gene1304	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1312
THEYE_A1313	THEYE_A1313		THEYE_A1313	1268949	1270055	-	cysteine desulfurase	identified by match to protein family HMM PF00266	gene	gene1303	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1313
THEYE_A1314	THEYE_A1314		THEYE_A1314	1271420	1272637	+	AstB/chuR-related protein	identified by match to protein family HMM PF04055	gene	gene1305	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1314
THEYE_A1315	THEYE_A1315		THEYE_A1315	1272609	1274252	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene1306	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1315
THEYE_A1316	THEYE_A1316	ftsZ	ftsZ	1274236	1275618	-	cell division protein FtsZ	identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065	gene	gene1307	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1316
THEYE_A1317	THEYE_A1317	ftsA	ftsA	1275642	1276928	-	cell division protein FtsA	identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174	gene	gene1308	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1317
THEYE_A1318	THEYE_A1318		THEYE_A1318	1276941	1277675	-	cell division protein FtsQ%2C putative	identified by match to protein family HMM PF08478	gene	gene1309	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1318
THEYE_A1319	THEYE_A1319		THEYE_A1319	1277665	1278579	-	D-alanine--D-alanine ligase B	identified by match to protein family HMM PF01071%3B match to protein family HMM PF01820%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF07478%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01205	gene	gene1310	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1319
THEYE_A1320	THEYE_A1320	murB	murB	1278581	1279468	-	UDP-N-acetylenolpyruvoylglucosamine reductase	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179	gene	gene1311	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1320
THEYE_A1321	THEYE_A1321	murC	murC	1279465	1280835	-	UDP-N-acetylmuramate--alanine ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082	gene	gene1312	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1321
THEYE_A1322	THEYE_A1322	murG	murG	1280836	1281936	-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133	gene	gene1313	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1322
THEYE_A1323	THEYE_A1323	ftsW	ftsW	1281933	1283111	-	cell division protein FtsW	identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02614	gene	gene1314	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1323
THEYE_A1324	THEYE_A1324	murD	murD	1283108	1284556	-	UDP-N-acetylmuramoylalanine--D-glutamate ligase	identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087	gene	gene1315	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1324
THEYE_A1325	THEYE_A1325		THEYE_A1325	1284528	1285556	-	D-alanyl-D-alanine carboxypeptidase	identified by match to protein family HMM PF00768	gene	gene1316	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1325
THEYE_A1326	THEYE_A1326	mraY	mraY	1285561	1286646	-	phospho-N-acetylmuramoyl-pentapeptide-transferase	identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445	gene	gene1317	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1326
THEYE_A1327	THEYE_A1327	murF	murF	1286649	1287983	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143	gene	gene1318	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1327
THEYE_A1328	THEYE_A1328		THEYE_A1328	1287990	1289468	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase	identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085	gene	gene1319	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1328
THEYE_A1329	THEYE_A1329		THEYE_A1329	1289465	1291195	-	stage V sporulation protein D	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717	gene	gene1320	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1329
THEYE_A1330	THEYE_A1330		THEYE_A1330	1291197	1291490	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1321	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1330
THEYE_A1331	THEYE_A1331	mraW	mraW	1291487	1292365	-	S-adenosyl-methyltransferase MraW	identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006	gene	gene1322	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1331
THEYE_A1332	THEYE_A1332	mraZ	mraZ	1292355	1292810	-	MraZ protein	identified by match to protein family HMM PF02381%3B match to protein family HMM TIGR00242	gene	gene1323	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1332
THEYE_A1333	THEYE_A1333	bioF	bioF	1292881	1294047	+	8-amino-7-oxononanoate synthase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR00858	gene	gene1324	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1333
THEYE_A1334	THEYE_A1334		THEYE_A1334	1294093	1295526	+	beta-glucosidase	identified by match to protein family HMM PF00933	gene	gene1325	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1334
THEYE_A1335	THEYE_A1335		THEYE_A1335	1295519	1296730	+	protein AmpG	identified by match to protein family HMM PF07690	gene	gene1326	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1335
THEYE_A1336	THEYE_A1336		THEYE_A1336	1296830	1297642	-	chain A%2C A Novel Iron Centre In The Split-Soret Cytochrome C From Desulfovibrio Desulfuricans Atcc 27774		gene	gene1327	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1336
THEYE_A1337	THEYE_A1337		THEYE_A1337	1297950	1299020	-	two-component hybrid sensor and regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1328	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1337
THEYE_A1338	THEYE_A1338		THEYE_A1338	1299017	1299385	-	two-component response regulator	identified by match to protein family HMM PF00072	gene	gene1329	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1338
THEYE_A1339	THEYE_A1339		THEYE_A1339	1299388	1302060	-	two-component system sensory histidine kinase	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1330	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1339
THEYE_A1340	THEYE_A1340		THEYE_A1340	1302060	1302497	-	cytochrome c family protein		gene	gene1331	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1340
THEYE_A1341	THEYE_A1341		THEYE_A1341	1302581	1303381	-	conserved hypothetical protein	identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00282	gene	gene1332	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1341
THEYE_A1342	THEYE_A1342		THEYE_A1342	1303371	1304930	-	hydrolase%2C HAD superfamily	identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319	gene	gene1333	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1342
THEYE_A1343	THEYE_A1343		THEYE_A1343	1305077	1305253	-	6S / SsrS RNA		ncRNA	gene1334	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1343
THEYE_A1344	THEYE_A1344		THEYE_A1344	1305339	1307678	+	DNA polymerase	identified by match to protein family HMM PF00136%3B match to protein family HMM PF03104%3B match to protein family HMM TIGR00592	gene	gene1335	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1344
THEYE_A1345	THEYE_A1345		THEYE_A1345	1307670	1308146	-	conserved Archaeal protein	identified by match to protein family HMM PF01927	gene	gene1336	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1345
THEYE_A1346	THEYE_A1346	rpoC	rpoC	1308143	1312258	-	DNA-directed RNA polymerase%2C beta' subunit	identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386	gene	gene1337	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1346
THEYE_A1347	THEYE_A1347	rpoB	rpoB	1312290	1316228	-	DNA-directed RNA polymerase%2C beta subunit	identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013	gene	gene1338	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1347
THEYE_A1348	THEYE_A1348	rplL	rplL	1316261	1316647	-	ribosomal protein L7/L12	identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855	gene	gene1339	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1348
THEYE_A1349	THEYE_A1349		THEYE_A1349	1316665	1317111	-	50S ribosomal protein L10	identified by match to protein family HMM PF00466	gene	gene1340	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1349
THEYE_A1350	THEYE_A1350	rplA	rplA	1317326	1318012	-	ribosomal protein L1	identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169	gene	gene1341	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1350
THEYE_A1351	THEYE_A1351	rplK	rplK	1318018	1318446	-	ribosomal protein L11	identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632	gene	gene1342	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1351
THEYE_A1352	THEYE_A1352	nusG	nusG	1318461	1318985	-	transcription termination/antitermination factor NusG	identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922	gene	gene1343	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1352
THEYE_A1353	THEYE_A1353	secE	secE	1318991	1319176	-	preprotein translocase%2C SecE subunit	identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964	gene	gene1344	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1353
THEYE_A1354	THEYE_A1354		THEYE_A1354	1319198	1319276	-	tRNA-Trp		tRNA	gene1345	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1354
THEYE_A1355	THEYE_A1355	tuf1	tuf1	1319436	1320635	-	translation elongation factor Tu	identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485	gene	gene1346	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1355
THEYE_A1356	THEYE_A1356		THEYE_A1356	1320683	1320758	-	tRNA-Thr		tRNA	gene1347	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1356
THEYE_A1357	THEYE_A1357		THEYE_A1357	1320763	1320837	-	tRNA-Gly		tRNA	gene1348	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1357
THEYE_A1358	THEYE_A1358		THEYE_A1358	1320840	1320925	-	tRNA-Tyr		tRNA	gene1349	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1358
THEYE_A1359	THEYE_A1359		THEYE_A1359	1320960	1321035	-	tRNA-Thr		tRNA	gene1350	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1359
THEYE_A1360	THEYE_A1360		THEYE_A1360	1321136	1321537	+	CBS domain protein	identified by match to protein family HMM PF00571	gene	gene1351	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1360
THEYE_A1361	THEYE_A1361		THEYE_A1361	1321538	1322170	+	conserved hypothetical protein	identified by match to protein family HMM PF01865%3B match to protein family HMM TIGR00153	gene	gene1352	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1361
THEYE_A1362	THEYE_A1362		THEYE_A1362	1322207	1323142	+	sodium/phosphate symporter	identified by match to protein family HMM PF01384	gene	gene1353	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1362
THEYE_A1363	THEYE_A1363		THEYE_A1363	1323128	1323568	-	hydrogenase expression/formation protein	identified by match to protein family HMM PF01750%3B match to protein family HMM TIGR00072	gene	gene1354	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1363
THEYE_A1365	THEYE_A1365		THEYE_A1365	1323636	1325156	-	F420-non-reducing hydrogenase subunit A%2C selenocysteine-containing	Selenoprotein. identified by similarity to SP:Q58592	gene	gene1355	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1365
THEYE_A1366	THEYE_A1366		THEYE_A1366	1325160	1326116	-	F420-non-reducing hydrogenase subunit G	identified by match to protein family HMM PF01058	gene	gene1356	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1366
THEYE_A1367	THEYE_A1367	vhuD	vhuD	1326113	1326529	-	methyl viologen-reducing hydrogenase%2C subunit delta	identified by match to protein family HMM PF02662	gene	gene1357	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1367
THEYE_A1368	THEYE_A1368		THEYE_A1368	1326531	1327427	-	CoB--CoM heterodisulfide reductase subunit B	identified by match to protein family HMM PF02754	gene	gene1358	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1368
THEYE_A1369	THEYE_A1369		THEYE_A1369	1327439	1327975	-	heterodisulfide reductase subunit C		gene	gene1359	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1369
THEYE_A1371	THEYE_A1371		THEYE_A1371	1327995	1329995	-	CoB--CoM heterodisulfide reductase iron-sulfur subunit A%2C selenocysteine-containing	Selenoprotein.	gene	gene1360	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1371
THEYE_A1372	THEYE_A1372		THEYE_A1372	1330131	1330218	+	tRNA-Leu		tRNA	gene1361	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1372
THEYE_A1373	THEYE_A1373		THEYE_A1373	1330409	1331482	+	sensor histidine kinase/response regulator%2C putative	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF08448	gene	gene1362	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1373
THEYE_A1374	THEYE_A1374		THEYE_A1374	1331454	1331873	-	conserved protein	identified by match to protein family HMM PF00582	gene	gene1363	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1374
THEYE_A1375	THEYE_A1375		THEYE_A1375	1331886	1332857	-	WbnF	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993	gene	gene1364	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1375
THEYE_A1376	THEYE_A1376	engA	engA	1332882	1334228	-	ribosome-associated GTPase EngA	identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00650%3B match to protein family HMM TIGR03594	gene	gene1365	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1376
THEYE_A1377	THEYE_A1377		THEYE_A1377	1334241	1335614	-	nitrogen assimilation regulatory protein NtrX	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene1366	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1377
THEYE_A1378	THEYE_A1378		THEYE_A1378	1335611	1337608	-	nitrogen regulation protein NtrY%2C putative	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229	gene	gene1367	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1378
THEYE_A1379	THEYE_A1379		THEYE_A1379	1337605	1338159	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1368	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1379
THEYE_A1380	THEYE_A1380		THEYE_A1380	1338241	1338588	+	lipoprotein%2C putative		gene	gene1369	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1380
THEYE_A1381	THEYE_A1381		THEYE_A1381	1338628	1339395	+	putative permease	identified by match to protein family HMM PF01925	gene	gene1370	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1381
THEYE_A1382	THEYE_A1382		THEYE_A1382	1339392	1340357	+	N-acetylmuramoyl-L-alanine amidase domain protein	identified by match to protein family HMM PF01520	gene	gene1371	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1382
THEYE_A1383	THEYE_A1383		THEYE_A1383	1340350	1340865	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1372	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1383
THEYE_A1384	THEYE_A1384	murI	murI	1340865	1341677	+	glutamate racemase	identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067	gene	gene1373	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1384
THEYE_A1385	THEYE_A1385	rph	rph	1341674	1342384	+	ribonuclease PH	identified by match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM TIGR01966	gene	gene1374	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1385
THEYE_A1386	THEYE_A1386	rpiB	rpiB	1342595	1343047	+	ribose 5-phosphate isomerase B	identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120	gene	gene1375	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1386
THEYE_A1387	THEYE_A1387	glyA2	glyA2	1343044	1344282	+	serine hydroxymethyltransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM PF00266%3B match to protein family HMM PF00464%3B match to protein family HMM PF01212%3B match to protein family HMM PF01276	gene	gene1376	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1387
THEYE_A1388	THEYE_A1388		THEYE_A1388	1344279	1344743	-	cytosine deaminase	identified by match to protein family HMM PF00383	gene	gene1377	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1388
THEYE_A1389	THEYE_A1389	hypB	hypB	1344710	1345354	-	hydrogenase accessory protein HypB	identified by match to protein family HMM PF02492%3B match to protein family HMM TIGR00073	gene	gene1378	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1389
THEYE_A1390	THEYE_A1390	hypA	hypA	1345351	1345701	-	hydrogenase nickel insertion protein HypA	identified by match to protein family HMM PF01155%3B match to protein family HMM TIGR00100	gene	gene1379	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1390
THEYE_A1391	THEYE_A1391		THEYE_A1391	1345701	1346018	-	conserved hypothetical protein		gene	gene1380	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1391
THEYE_A1392	THEYE_A1392		THEYE_A1392	1346021	1346428	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1381	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1392
THEYE_A1393	THEYE_A1393		THEYE_A1393	1346468	1347043	-	CDP-alcohol phosphatidyltransferase family protein	identified by match to protein family HMM PF01066	gene	gene1382	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1393
THEYE_A1394	THEYE_A1394		THEYE_A1394	1347045	1348142	-	conserved protein	identified by match to protein family HMM PF01658%3B match to protein family HMM PF07994	gene	gene1383	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1394
THEYE_A1395	THEYE_A1395	xerC	xerC	1348730	1349635	+	tyrosine recombinase XerC	identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899%3B match to protein family HMM TIGR02224	gene	gene1384	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1395
THEYE_A1396	THEYE_A1396		THEYE_A1396	1349635	1350168	+	ATP-dependent protease HslV	identified by match to protein family HMM PF00227	gene	gene1385	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1396
THEYE_A1397	THEYE_A1397	hslU	hslU	1350168	1351505	+	heat shock protein HslVU%2C ATPase subunit HslU	identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390	gene	gene1386	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1397
THEYE_A1398	THEYE_A1398		THEYE_A1398	1351549	1352193	+	lipoprotein%2C RlpA family	identified by match to protein family HMM PF03330%3B match to protein family HMM PF05036%3B match to protein family HMM TIGR00413	gene	gene1387	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1398
THEYE_A1399	THEYE_A1399		THEYE_A1399	1352183	1352773	+	conserved protein	identified by match to protein family HMM PF02663	gene	gene1388	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1399
THEYE_A1400	THEYE_A1400	rumA	rumA	1352770	1353939	+	23S rRNA (uracil-5-)-methyltransferase RumA	identified by match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479	gene	gene1389	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1400
THEYE_A1401	THEYE_A1401		THEYE_A1401	1353955	1354290	+	cupin domain protein	identified by match to protein family HMM PF07883	gene	gene1390	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1401
THEYE_A1402	THEYE_A1402		THEYE_A1402	1354545	1355228	-	DNA-binding response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486	gene	gene1391	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1402
THEYE_A1403	THEYE_A1403		THEYE_A1403	1355225	1356598	-	sensor protein BaeS	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1392	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1403
THEYE_A1404	THEYE_A1404		THEYE_A1404	1356792	1357496	+	calcium-binding EF-hand%2C putative	identified by match to protein family HMM PF00036	gene	gene1393	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1404
THEYE_A1405	THEYE_A1405		THEYE_A1405	1357750	1359054	+	RND efflux system%2C outer membrane lipoprotein%2C NodT	identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01845	gene	gene1394	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1405
THEYE_A1406	THEYE_A1406		THEYE_A1406	1359065	1360336	+	secretion protein HlyD	identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730	gene	gene1395	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1406
THEYE_A1407	THEYE_A1407		THEYE_A1407	1360336	1361043	+	ATP-binding protein of ABC transporter	identified by match to protein family HMM PF00005	gene	gene1396	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1407
THEYE_A1408	THEYE_A1408		THEYE_A1408	1361045	1362250	+	permease protein of ABC transporter	identified by match to protein family HMM PF02687	gene	gene1397	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1408
THEYE_A1409	THEYE_A1409		THEYE_A1409	1362508	1362582	-	tRNA-Val		tRNA	gene1398	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1409
THEYE_A1410	THEYE_A1410		THEYE_A1410	1362929	1363144	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1400	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1410
THEYE_A1411	THEYE_A1411		THEYE_A1411	1362719	1362934	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1399	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1411
THEYE_A1412	THEYE_A1412		THEYE_A1412	1363198	1364046	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1401	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1412
THEYE_A1413	THEYE_A1413		THEYE_A1413	1364036	1364857	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1402	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1413
THEYE_A1414	THEYE_A1414		THEYE_A1414	1364872	1365699	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1403	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1414
THEYE_A1415	THEYE_A1415		THEYE_A1415	1365801	1366001	+	conserved domain protein	identified by match to protein family HMM PF00403	gene	gene1404	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1415
THEYE_A1416	THEYE_A1416	pheT	pheT	1365998	1368076	-	phenylalanyl-tRNA synthetase%2C beta subunit	identified by match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472	gene	gene1405	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1416
THEYE_A1417	THEYE_A1417	pheS	pheS	1368076	1369080	-	phenylalanyl-tRNA synthetase%2C alpha subunit	identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468	gene	gene1406	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1417
THEYE_A1418	THEYE_A1418	rplT	rplT	1369081	1369443	-	ribosomal protein L20	identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032	gene	gene1407	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1418
THEYE_A1419	THEYE_A1419		THEYE_A1419	1369511	1369588	-	tRNA-Asn		tRNA	gene1408	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1419
THEYE_A1420	THEYE_A1420	rplQ	rplQ	1369627	1370028	-	ribosomal protein L17	identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059	gene	gene1409	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1420
THEYE_A1421	THEYE_A1421	rpoA	rpoA	1370032	1371063	-	DNA-directed RNA polymerase%2C alpha subunit	identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027	gene	gene1410	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1421
THEYE_A1422	THEYE_A1422	rpsD	rpsD	1371095	1371721	-	ribosomal protein S4	identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017	gene	gene1411	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1422
THEYE_A1423	THEYE_A1423	rpsK	rpsK	1371722	1372108	-	ribosomal protein S11	identified by match to protein family HMM PF00411	gene	gene1412	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1423
THEYE_A1424	THEYE_A1424	rpsM	rpsM	1372136	1372501	-	ribosomal protein S13p/S18e	identified by match to protein family HMM PF00416	gene	gene1413	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1424
THEYE_A1425	THEYE_A1425	infA	infA	1372640	1372858	-	translation initiation factor IF-1	identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008	gene	gene1414	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1425
THEYE_A1426	THEYE_A1426	map	map	1372884	1373633	-	methionine aminopeptidase%2C type I	identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500	gene	gene1415	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1426
THEYE_A1427	THEYE_A1427		THEYE_A1427	1373641	1374948	-	preprotein translocase%2C SecY subunit	identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967	gene	gene1416	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1427
THEYE_A1428	THEYE_A1428	rplO	rplO	1374948	1375394	-	ribosomal protein L15	identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071	gene	gene1417	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1428
THEYE_A1429	THEYE_A1429	rpsE	rpsE	1375391	1375936	-	ribosomal protein S5	identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021	gene	gene1418	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1429
THEYE_A1430	THEYE_A1430	rplR	rplR	1375946	1376305	-	ribosomal protein L18	identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060	gene	gene1419	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1430
THEYE_A1431	THEYE_A1431		THEYE_A1431	1376318	1376860	-	50S ribosomal protein L6	identified by match to protein family HMM PF00347	gene	gene1420	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1431
THEYE_A1432	THEYE_A1432	rpsH	rpsH	1376872	1377267	-	ribosomal protein S8	identified by match to protein family HMM PF00410	gene	gene1421	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1432
THEYE_A1433	THEYE_A1433	rpsN	rpsN	1377280	1377465	-	ribosomal protein S14p/S29e	identified by match to protein family HMM PF00253	gene	gene1422	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1433
THEYE_A1434	THEYE_A1434		THEYE_A1434	1377475	1378041	-	50S ribosomal protein L5	identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673	gene	gene1423	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1434
THEYE_A1435	THEYE_A1435	rplX	rplX	1378041	1378358	-	ribosomal protein L24	identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079	gene	gene1424	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1435
THEYE_A1436	THEYE_A1436	rplN	rplN	1378372	1378740	-	ribosomal protein L14	identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067	gene	gene1425	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1436
THEYE_A1437	THEYE_A1437	rpsQ	rpsQ	1378737	1378988	-	ribosomal protein S17	identified by match to protein family HMM PF00366	gene	gene1426	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1437
THEYE_A1438	THEYE_A1438	rpmC	rpmC	1379016	1379234	-	ribosomal protein L29	identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012	gene	gene1427	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1438
THEYE_A1439	THEYE_A1439	rplP	rplP	1379231	1379650	-	ribosomal protein L16	identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164	gene	gene1428	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1439
THEYE_A1440	THEYE_A1440	rpsC	rpsC	1379671	1380321	-	ribosomal protein S3	identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009	gene	gene1429	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1440
THEYE_A1441	THEYE_A1441	rplV	rplV	1380337	1380678	-	ribosomal protein L22	identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044	gene	gene1430	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1441
THEYE_A1442	THEYE_A1442	rpsS	rpsS	1380682	1380969	-	ribosomal protein S19	identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050	gene	gene1431	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1442
THEYE_A1443	THEYE_A1443	rplB	rplB	1380982	1381800	-	ribosomal protein L2	identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171	gene	gene1432	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1443
THEYE_A1444	THEYE_A1444	rplW	rplW	1381801	1382088	-	ribosomal protein L23	identified by match to protein family HMM PF00276	gene	gene1433	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1444
THEYE_A1445	THEYE_A1445	rplD	rplD	1382088	1382720	-	ribosomal protein L4/L1 family	identified by match to protein family HMM PF00573	gene	gene1434	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1445
THEYE_A1446	THEYE_A1446	rplC	rplC	1382717	1383334	-	ribosomal protein L3	identified by match to protein family HMM PF00297	gene	gene1435	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1446
THEYE_A1447	THEYE_A1447	rpsJ	rpsJ	1383331	1383636	-	ribosomal protein S10	identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049	gene	gene1436	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1447
THEYE_A1448	THEYE_A1448	tuf2	tuf2	1383638	1384837	-	translation elongation factor Tu	identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485	gene	gene1437	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1448
THEYE_A1449	THEYE_A1449	fusA2	fusA2	1384869	1386953	-	translation elongation factor G	identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484	gene	gene1438	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1449
THEYE_A1450	THEYE_A1450	rpsG	rpsG	1386967	1387437	-	ribosomal protein S7	identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029	gene	gene1439	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1450
THEYE_A1451	THEYE_A1451	rpsL	rpsL	1387451	1387822	-	ribosomal protein S12	identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981	gene	gene1440	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1451
THEYE_A1452	THEYE_A1452		THEYE_A1452	1388046	1388711	-	conserved hypothetical protein		gene	gene1441	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1452
THEYE_A1453	THEYE_A1453	pth	pth	1388726	1389289	-	peptidyl-tRNA hydrolase	identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447	gene	gene1442	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1453
THEYE_A1454	THEYE_A1454		THEYE_A1454	1389298	1389942	-	ribosomal protein L25%2C Ctc-form	identified by match to protein family HMM PF01386%3B match to protein family HMM TIGR00731	gene	gene1443	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1454
THEYE_A1455	THEYE_A1455		THEYE_A1455	1389957	1390901	-	ribose-phosphate pyrophosphokinase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251	gene	gene1444	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1455
THEYE_A1456	THEYE_A1456		THEYE_A1456	1390946	1391022	-	tRNA-Gln		tRNA	gene1445	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1456
THEYE_A1457	THEYE_A1457	ispE	ispE	1391049	1391906	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase	identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00154	gene	gene1446	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1457
THEYE_A1458	THEYE_A1458		THEYE_A1458	1391906	1393534	-	TPR domain protein%2C putative	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1447	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1458
THEYE_A1459	THEYE_A1459		THEYE_A1459	1393797	1393988	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1448	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1459
THEYE_A1460	THEYE_A1460		THEYE_A1460	1394010	1394552	-	conserved protein		gene	gene1449	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1460
THEYE_A1461	THEYE_A1461	uvrA2	uvrA2	1394611	1397358	+	excinuclease ABC%2C A subunit	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630	gene	gene1450	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1461
THEYE_A1462	THEYE_A1462		THEYE_A1462	1397347	1398465	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1451	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1462
THEYE_A1463	THEYE_A1463		THEYE_A1463	1398458	1399531	-	membrane protein%2C putative	identified by match to protein family HMM PF01594	gene	gene1452	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1463
THEYE_A1464	THEYE_A1464		THEYE_A1464	1399535	1400176	-	anthranilate synthase component II	identified by match to protein family HMM PF00117%3B match to protein family HMM PF07722	gene	gene1453	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1464
THEYE_A1465	THEYE_A1465		THEYE_A1465	1400173	1401090	-	N-acyl-D-aspartate deacylase	identified by match to protein family HMM PF07908	gene	gene1454	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1465
THEYE_A1466	THEYE_A1466		THEYE_A1466	1401120	1401725	-	N-acyl-D-glutamate deacylase		gene	gene1455	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1466
THEYE_A1467	THEYE_A1467		THEYE_A1467	1401726	1402952	-	N-acetylmuramoyl-L-alanine amidase%2C family 3	identified by match to protein family HMM PF01520	gene	gene1456	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1467
THEYE_A1468	THEYE_A1468		THEYE_A1468	1402957	1403181	-	thioredoxin family protein	identified by match to protein family HMM PF01106	gene	gene1457	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1468
THEYE_A1469	THEYE_A1469		THEYE_A1469	1403292	1403368	+	tRNA-Met		tRNA	gene1458	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1469
THEYE_A1470	THEYE_A1470		THEYE_A1470	1403370	1405508	-	carbon monoxide dehydrogenase/acetyl CoA synthase alpha subunit	identified by match to protein family HMM PF03598%3B match to protein family HMM TIGR00316	gene	gene1459	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1470
THEYE_A1471	THEYE_A1471		THEYE_A1471	1405505	1406851	-	acetyl-CoA decarbonylase/synthase complex gamma subunit	identified by match to protein family HMM PF03599%3B match to protein family HMM PF04060	gene	gene1460	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1471
THEYE_A1472	THEYE_A1472		THEYE_A1472	1406864	1407802	-	corrinoid/iron-sulfur protein%2C small subunit		gene	gene1461	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1472
THEYE_A1473	THEYE_A1473		THEYE_A1473	1407813	1408595	-	5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase	identified by match to protein family HMM PF00809	gene	gene1462	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1473
THEYE_A1474	THEYE_A1474		THEYE_A1474	1409180	1410799	+	methyl-accepting chemotaxis protein	identified by match to protein family HMM PF00015%3B match to protein family HMM PF00672	gene	gene1463	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1474
THEYE_A1475	THEYE_A1475		THEYE_A1475	1410863	1411636	+	spfh/band 7 domain protein	identified by match to protein family HMM PF01145	gene	gene1464	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1475
THEYE_A1476	THEYE_A1476		THEYE_A1476	1411623	1412339	+	conserved hypothetical protein	identified by match to protein family HMM PF09335	gene	gene1465	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1476
THEYE_A1477	THEYE_A1477		THEYE_A1477	1412340	1413317	-	3-oxoacyl-[acyl-carrier-protein] synthase III protein 1	identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747	gene	gene1466	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1477
THEYE_A1478	THEYE_A1478	plsX	plsX	1413277	1414314	-	fatty acid/phospholipid synthesis protein PlsX	identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182	gene	gene1467	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1478
THEYE_A1479	THEYE_A1479	rpmF	rpmF	1414323	1414502	-	ribosomal protein L32	identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031	gene	gene1468	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1479
THEYE_A1480	THEYE_A1480		THEYE_A1480	1414495	1415013	-	conserved hypothetical protein	identified by match to protein family HMM PF02620	gene	gene1469	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1480
THEYE_A1481	THEYE_A1481		THEYE_A1481	1415092	1416363	-	carboxy-terminal processing protease	identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225	gene	gene1470	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1481
THEYE_A1482	THEYE_A1482		THEYE_A1482	1416385	1417539	-	peptidase M23B%2C putative	identified by match to protein family HMM PF01551	gene	gene1471	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1482
THEYE_A1483	THEYE_A1483		THEYE_A1483	1417542	1418405	-	efflux ABC transporter%2C permease protein	identified by match to protein family HMM PF02687	gene	gene1472	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1483
THEYE_A1484	THEYE_A1484	ftsE	ftsE	1418377	1419048	-	cell division ATP-binding protein FtsE	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02673	gene	gene1473	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1484
THEYE_A1485	THEYE_A1485		THEYE_A1485	1419045	1420028	-	transketolase domain protein	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene1474	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1485
THEYE_A1486	THEYE_A1486		THEYE_A1486	1420015	1420839	-	transketolase	identified by match to protein family HMM PF00456	gene	gene1475	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1486
THEYE_A1487	THEYE_A1487		THEYE_A1487	1420923	1423439	+	DNA polymerase I%2C thermostable	identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593	gene	gene1476	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1487
THEYE_A1488	THEYE_A1488		THEYE_A1488	1423452	1424765	-	insulinase family%2C putative	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene1477	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1488
THEYE_A1489	THEYE_A1489		THEYE_A1489	1424762	1426057	-	peptidase%2C M16 family	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene1478	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1489
THEYE_A1490	THEYE_A1490		THEYE_A1490	1426054	1426413	-	response regulator	identified by match to protein family HMM PF00072	gene	gene1479	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1490
THEYE_A1491	THEYE_A1491		THEYE_A1491	1426394	1429048	-	sensor histidine kinase%2C putative	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00989%3B match to protein family HMM PF01590%3B match to protein family HMM PF02518%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene1480	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1491
THEYE_A1492	THEYE_A1492		THEYE_A1492	1429017	1430510	-	glycogen synthase	identified by match to protein family HMM PF00534%3B match to protein family HMM PF08323%3B match to protein family HMM TIGR02095	gene	gene1481	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1492
THEYE_A1493	THEYE_A1493	galT	galT	1430507	1431505	-	galactose-1-phosphate uridylyltransferase	identified by match to protein family HMM TIGR00209	gene	gene1482	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1493
THEYE_A1494	THEYE_A1494		THEYE_A1494	1431559	1432578	+	conserved hypothetical protein		gene	gene1483	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1494
THEYE_A1495	THEYE_A1495		THEYE_A1495	1432584	1433804	+	sporulation kinase C	identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518	gene	gene1484	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1495
THEYE_A1496	THEYE_A1496		THEYE_A1496	1433783	1435075	+	FrgC	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954	gene	gene1485	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1496
THEYE_A1497	THEYE_A1497	pcm	pcm	1435076	1435726	-	protein-L-isoaspartate O-methyltransferase	identified by match to protein family HMM PF01135%3B match to protein family HMM TIGR00080	gene	gene1486	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1497
THEYE_A1498	THEYE_A1498	gidA2	gidA2	1435723	1437105	-	glucose inhibited division protein A	identified by match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF07992	gene	gene1487	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1498
THEYE_A1499	THEYE_A1499	surE	surE	1437095	1437844	-	5'/3'-nucleotidase SurE	identified by match to protein family HMM PF01975%3B match to protein family HMM TIGR00087	gene	gene1488	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1499
THEYE_A1500	THEYE_A1500		THEYE_A1500	1437844	1438812	-	octaprenyl-diphosphate synthase	identified by match to protein family HMM PF00348	gene	gene1489	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1500
THEYE_A1501	THEYE_A1501		THEYE_A1501	1438809	1439846	-	methylthioribose-1-phosphate isomerase	identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00524	gene	gene1490	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1501
THEYE_A1502	THEYE_A1502		THEYE_A1502	1440319	1441779	+	putative hemagglutinin-related protein	identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532	gene	gene1491	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1502
THEYE_A1503	THEYE_A1503		THEYE_A1503	1442120	1443040	+	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1492	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1503
THEYE_A1504	THEYE_A1504		THEYE_A1504	1443056	1443907	-	conserved hypothetical protein		gene	gene1493	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1504
THEYE_A1505	THEYE_A1505		THEYE_A1505	1443892	1444434	-	conserved hypothetical protein		gene	gene1494	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1505
THEYE_A1506	THEYE_A1506		THEYE_A1506	1444476	1444694	-	conserved hypothetical protein	identified by match to protein family HMM PF01206	gene	gene1495	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1506
THEYE_A1507	THEYE_A1507		THEYE_A1507	1444697	1445788	-	conserved hypothetical protein		gene	gene1496	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1507
THEYE_A1508	THEYE_A1508		THEYE_A1508	1446459	1446623	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1497	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1508
THEYE_A1509	THEYE_A1509	fliS	fliS	1446691	1447116	-	flagellar protein FliS	identified by match to protein family HMM PF02561%3B match to protein family HMM TIGR00208	gene	gene1498	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1509
THEYE_A1510	THEYE_A1510		THEYE_A1510	1447119	1448441	-	flagellar hook-associated protein 2	identified by match to protein family HMM PF02465%3B match to protein family HMM PF07195%3B match to protein family HMM PF07196	gene	gene1499	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1510
THEYE_A1511	THEYE_A1511	flaG	flaG	1448444	1448836	-	FlaG protein	identified by match to protein family HMM PF03646	gene	gene1500	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1511
THEYE_A1512	THEYE_A1512		THEYE_A1512	1448888	1450423	-	flagellin	identified by match to protein family HMM PF00669%3B match to protein family HMM PF00700	gene	gene1501	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1512
THEYE_A1513	THEYE_A1513		THEYE_A1513	1450846	1451688	+	lipopolysaccharide biosynthesis protein RfbH		gene	gene1502	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1513
THEYE_A1514	THEYE_A1514		THEYE_A1514	1451914	1452969	+	glycosyl transferase%2C group 2 family protein	identified by match to protein family HMM PF00535	gene	gene1503	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1514
THEYE_A1515	THEYE_A1515	rfbF	rfbF	1452966	1453736	+	glucose-1-phosphate cytidylyltransferase	identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02623	gene	gene1504	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1515
THEYE_A1516	THEYE_A1516		THEYE_A1516	1453721	1454731	+	CDP-glucose 4%2C6-dehydratase	identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993	gene	gene1505	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1516
THEYE_A1517	THEYE_A1517		THEYE_A1517	1454709	1455908	+	methyltransferase%2C putative	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM PF08484	gene	gene1506	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1517
THEYE_A1518	THEYE_A1518		THEYE_A1518	1455905	1456837	+	CDP-abequose synthase	identified by match to protein family HMM PF01370	gene	gene1507	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1518
THEYE_A1519	THEYE_A1519		THEYE_A1519	1456819	1457616	+	transketolase subunit A	identified by match to protein family HMM PF00456	gene	gene1508	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1519
THEYE_A1520	THEYE_A1520		THEYE_A1520	1457639	1458574	+	1-deoxy-xylulose 5-phosphate synthase	identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780	gene	gene1509	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1520
THEYE_A1521	THEYE_A1521		THEYE_A1521	1458624	1459298	-	conserved hypothetical protein		gene	gene1510	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1521
THEYE_A1522	THEYE_A1522		THEYE_A1522	1459515	1460732	+	asparate kinase%2C monofunctional class	identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657	gene	gene1511	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1522
THEYE_A1523	THEYE_A1523	argJ	argJ	1460732	1461910	+	arginine biosynthesis bifunctional protein ArgJ	identified by match to protein family HMM PF01960%3B match to protein family HMM TIGR00120	gene	gene1512	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1523
THEYE_A1524	THEYE_A1524	clpS	clpS	1461921	1462226	+	ATP-dependent Clp protease adaptor protein ClpS	identified by match to protein family HMM PF02617	gene	gene1513	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1524
THEYE_A1525	THEYE_A1525	clpA	clpA	1462216	1464438	+	ATP-dependent Clp protease ATP-binding subunit ClpA	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02639	gene	gene1514	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1525
THEYE_A1526	THEYE_A1526	aat	aat	1464416	1465150	+	leucyl/phenylalanyl-tRNA--protein transferase	identified by match to protein family HMM PF03588%3B match to protein family HMM TIGR00667	gene	gene1515	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1526
THEYE_A1527	THEYE_A1527		THEYE_A1527	1465154	1465828	+	conserved hypothetical protein%2C putative	identified by match to protein family HMM PF00702	gene	gene1516	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1527
THEYE_A1528	THEYE_A1528		THEYE_A1528	1465830	1466174	+	peptide chain release factor	identified by match to protein family HMM PF00472	gene	gene1517	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1528
THEYE_A1529	THEYE_A1529		THEYE_A1529	1466272	1466604	-	ATP synthase C chain	identified by match to protein family HMM PF00137	gene	gene1518	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1529
THEYE_A1530	THEYE_A1530	atpB	atpB	1466633	1467286	-	ATP synthase F0%2C A subunit	identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131	gene	gene1519	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1530
THEYE_A1531	THEYE_A1531		THEYE_A1531	1467461	1468363	+	conserved hypothetical protein	identified by match to protein family HMM PF04307	gene	gene1520	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1531
THEYE_A1532	THEYE_A1532		THEYE_A1532	1468360	1468986	+	radical activating enzyme	identified by match to protein family HMM PF04055	gene	gene1521	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1532
THEYE_A1533	THEYE_A1533		THEYE_A1533	1468983	1470227	-	ATP/GTP-binding domain protein	identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728	gene	gene1522	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1533
THEYE_A1534	THEYE_A1534		THEYE_A1534	1470224	1471468	-	HD domain protein	identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277	gene	gene1523	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1534
THEYE_A1535	THEYE_A1535		THEYE_A1535	1471535	1472194	+	conserved hypothetical protein	identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726	gene	gene1524	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1535
THEYE_A1536	THEYE_A1536	fabD1	fabD1	1472204	1472280	+	tRNA-Pro		tRNA	gene1525	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1536
THEYE_A1537	THEYE_A1537	aroF1	aroF1	1472475	1473488	+	phospho-2-dehydro-3-deoxyheptonate aldolase	identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01361	gene	gene1526	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1537
THEYE_A1538	THEYE_A1538		THEYE_A1538	1473485	1473751	-	MtN3/saliva family	identified by match to protein family HMM PF03083	gene	gene1527	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1538
THEYE_A1539	THEYE_A1539		THEYE_A1539	1473798	1474640	+	HD domain protein%2C putative	identified by match to protein family HMM PF08668	gene	gene1528	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1539
THEYE_A1540	THEYE_A1540		THEYE_A1540	1474637	1475881	+	sensory box/ggdef domain protein	identified by match to protein family HMM PF00990%3B match to protein family HMM PF01590%3B match to protein family HMM TIGR00254	gene	gene1529	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1540
THEYE_A1541	THEYE_A1541	rpsB	rpsB	1476015	1476800	+	ribosomal protein S2	identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011	gene	gene1530	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1541
THEYE_A1542	THEYE_A1542	tsf	tsf	1476813	1477412	+	translation elongation factor Ts	identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116	gene	gene1531	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1542
THEYE_A1543	THEYE_A1543	pyrH	pyrH	1477405	1478157	+	uridylate kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075	gene	gene1532	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1543
THEYE_A1544	THEYE_A1544	frr	frr	1478129	1478686	+	ribosome recycling factor	identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496	gene	gene1533	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1544
THEYE_A1545	THEYE_A1545		THEYE_A1545	1478687	1479076	+	DnaK suppressor protein	identified by match to protein family HMM PF01258	gene	gene1534	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1545
THEYE_A1546	THEYE_A1546	truA	truA	1479073	1479837	-	tRNA pseudouridine synthase A	identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071	gene	gene1535	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1546
THEYE_A1547	THEYE_A1547		THEYE_A1547	1480025	1481107	+	conserved protein	identified by match to protein family HMM PF05559	gene	gene1536	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1547
THEYE_A1548	THEYE_A1548		THEYE_A1548	1481102	1482325	-	lipopolysaccharide heptosyltransferase III%2C putative	identified by match to protein family HMM PF01075%3B match to protein family HMM TIGR02201	gene	gene1537	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1548
THEYE_A1549	THEYE_A1549		THEYE_A1549	1482304	1483407	-	WabG	identified by match to protein family HMM PF00534	gene	gene1538	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1549
THEYE_A1550	THEYE_A1550		THEYE_A1550	1483407	1484195	-	xylanase/chitin deacetylase	identified by match to protein family HMM PF01522	gene	gene1539	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1550
THEYE_A1551	THEYE_A1551		THEYE_A1551	1484197	1485105	-	conserved Crenarchaeal protein%2C putative		gene	gene1540	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1551
THEYE_A1552	THEYE_A1552		THEYE_A1552	1485131	1487755	-	polyA polymerase family protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01368%3B match to protein family HMM PF01743	gene	gene1541	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1552
THEYE_A1553	THEYE_A1553		THEYE_A1553	1487756	1488736	-	conserved protein	identified by match to protein family HMM PF08461	gene	gene1542	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1553
THEYE_A1554	THEYE_A1554		THEYE_A1554	1488866	1490059	-	transposase%2C putative	identified by match to protein family HMM PF02371	gene	gene1543	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1554
THEYE_A1555	THEYE_A1555		THEYE_A1555	1490060	1490287	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1544	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1555
THEYE_A1556	THEYE_A1556		THEYE_A1556	1490297	1491883	+	L-lactate permease%2C putative		gene	gene1545	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1556
THEYE_A1557	THEYE_A1557	radA	radA	1492127	1493503	+	DNA repair protein RadA	identified by match to protein family HMM TIGR00416	gene	gene1546	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1557
THEYE_A1558	THEYE_A1558		THEYE_A1558	1493493	1494107	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1547	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1558
THEYE_A1559	THEYE_A1559	ksgA	ksgA	1494100	1494891	+	dimethyladenosine transferase	identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755	gene	gene1548	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1559
THEYE_A1560	THEYE_A1560		THEYE_A1560	1495024	1495398	+	conserved hypothetical protein		gene	gene1549	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1560
THEYE_A1561	THEYE_A1561		THEYE_A1561	1495447	1495803	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1550	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1561
THEYE_A1562	THEYE_A1562		THEYE_A1562	1495867	1496256	+	OB-fold nucleic acid binding domain protein	identified by match to protein family HMM PF01336	gene	gene1551	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1562
THEYE_A1563	THEYE_A1563		THEYE_A1563	1496243	1496761	-	chemotaxis protein CheW	identified by match to protein family HMM PF01584	gene	gene1552	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1563
THEYE_A1564	THEYE_A1564		THEYE_A1564	1497184	1498002	+	conserved hypothetical protein	identified by match to protein family HMM PF02596	gene	gene1553	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1564
THEYE_A1565	THEYE_A1565		THEYE_A1565	1498019	1498645	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1554	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1565
THEYE_A1566	THEYE_A1566		THEYE_A1566	1498715	1499860	+	acriflavine resistance protein A	identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730	gene	gene1555	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1566
THEYE_A1567	THEYE_A1567		THEYE_A1567	1499860	1502991	+	AcrB protein	identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915	gene	gene1556	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1567
THEYE_A1568	THEYE_A1568		THEYE_A1568	1503042	1504439	+	outer membrane protein OprM	identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01845	gene	gene1557	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1568
THEYE_A1569	THEYE_A1569		THEYE_A1569	1504442	1505386	+	universal stress protein family		gene	gene1558	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1569
THEYE_A1570	THEYE_A1570		THEYE_A1570	1505597	1505992	+	conserved hypothetical protein	identified by match to protein family HMM PF01850%3B match to protein family HMM TIGR00305	gene	gene1559	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1570
THEYE_A1571	THEYE_A1571		THEYE_A1571	1505995	1507119	-	ABC-2 type transporter	identified by match to protein family HMM PF01061	gene	gene1560	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1571
THEYE_A1572	THEYE_A1572		THEYE_A1572	1507116	1508249	-	ATPase component ABC-type multidrug transport system	identified by match to protein family HMM PF01061	gene	gene1561	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1572
THEYE_A1573	THEYE_A1573		THEYE_A1573	1508395	1508790	+	nucleotidyltransferase%2C putative	identified by match to protein family HMM PF01909	gene	gene1562	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1573
THEYE_A1574	THEYE_A1574		THEYE_A1574	1508783	1509205	+	protein of unknown function	identified by match to protein family HMM PF01934	gene	gene1563	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1574
THEYE_A1575	THEYE_A1575		THEYE_A1575	1509202	1510956	-	ABC transporter ATP-binding component	identified by match to protein family HMM PF00005	gene	gene1564	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1575
THEYE_A1576	THEYE_A1576		THEYE_A1576	1511086	1512036	-	HlyD family secretion protein%2C putative	identified by match to protein family HMM PF00529	gene	gene1565	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1576
THEYE_A1577	THEYE_A1577		THEYE_A1577	1512116	1512487	+	conserved hypothetical protein		gene	gene1566	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1577
THEYE_A1578	THEYE_A1578		THEYE_A1578	1512484	1512575	-	tRNA-Ser		tRNA	gene1567	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1578
THEYE_A1579	THEYE_A1579	trmU1	trmU1	1512614	1513642	+	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	identified by match to protein family HMM PF02568%3B match to protein family HMM PF03054%3B match to protein family HMM TIGR00420	gene	gene1568	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1579
THEYE_A1580	THEYE_A1580	argC1	argC1	1513617	1514657	-	N-acetyl-gamma-glutamyl-phosphate reductase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01850	gene	gene1569	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1580
THEYE_A1581	THEYE_A1581	rplI1	rplI1	1514659	1515045	-	ribosomal protein S9	identified by match to protein family HMM PF00380	gene	gene1570	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1581
THEYE_A1582	THEYE_A1582	rplM1	rplM1	1515063	1515494	-	ribosomal protein L13	identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066	gene	gene1571	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1582
THEYE_A1583	THEYE_A1583		THEYE_A1583	1515642	1516382	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene1572	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1583
THEYE_A1584	THEYE_A1584		THEYE_A1584	1516623	1517405	+	electron transfer flavoprotein beta-subunit	identified by match to protein family HMM PF01012	gene	gene1573	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1584
THEYE_A1585	THEYE_A1585		THEYE_A1585	1517396	1518577	+	electron transfer flavoprotein alpha-subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00766%3B match to protein family HMM PF01012	gene	gene1574	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1585
THEYE_A1586	THEYE_A1586	fabD	fabD	1518574	1519491	+	malonyl CoA-acyl carrier protein transacylase	identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128	gene	gene1575	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1586
THEYE_A1587	THEYE_A1587	mdh1	mdh1	1519510	1520448	+	malate dehydrogenase%2C NAD-dependent	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01763	gene	gene1576	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1587
THEYE_A1588	THEYE_A1588		THEYE_A1588	1520448	1520861	+	nucleoside diphosphate kinase	identified by match to protein family HMM PF00334	gene	gene1577	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1588
THEYE_A1589	THEYE_A1589		THEYE_A1589	1520847	1521431	-	nudix hydrolase 3	identified by match to protein family HMM PF00293	gene	gene1578	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1589
THEYE_A1590	THEYE_A1590		THEYE_A1590	1521561	1523384	-	carbon starvation protein%2C CstA family	identified by match to protein family HMM PF02554	gene	gene1579	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1590
THEYE_A1591	THEYE_A1591		THEYE_A1591	1523741	1524514	-	sensory transduction protein LytT	identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397	gene	gene1580	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1591
THEYE_A1592	THEYE_A1592		THEYE_A1592	1524489	1526195	-	sensor protein LytS	identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694	gene	gene1581	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1592
THEYE_A1593	THEYE_A1593		THEYE_A1593	1526238	1526981	-	ABC-2 type transporter superfamily	identified by match to protein family HMM PF01061	gene	gene1582	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1593
THEYE_A1594	THEYE_A1594		THEYE_A1594	1526978	1527829	-	ABC-type multidrug transport system%2C ATPase component	identified by match to protein family HMM PF00005	gene	gene1583	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1594
THEYE_A1595	THEYE_A1595		THEYE_A1595	1527826	1529580	-	ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent	identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM TIGR02504	gene	gene1584	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1595
THEYE_A1596	THEYE_A1596		THEYE_A1596	1529639	1529857	+	putative zinc-binding protein	identified by match to protein family HMM PF03884	gene	gene1585	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1596
THEYE_A1597	THEYE_A1597	dapB1	dapB1	1529811	1530614	+	dihydrodipicolinate reductase	identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036	gene	gene1586	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1597
THEYE_A1598	THEYE_A1598		THEYE_A1598	1530640	1531125	-	rubrerythrin subfamily	identified by match to protein family HMM PF02915	gene	gene1587	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1598
THEYE_A1599	THEYE_A1599		THEYE_A1599	1531140	1531301	-	rubredoxin	identified by match to protein family HMM PF00301	gene	gene1588	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1599
THEYE_A1600	THEYE_A1600		THEYE_A1600	1531396	1533606	+	penicillin-binding protein 1	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene1589	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1600
THEYE_A1601	THEYE_A1601	panE1	panE1	1533609	1534547	+	2-dehydropantoate 2-reductase	identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745	gene	gene1590	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1601
THEYE_A1602	THEYE_A1602		THEYE_A1602	1534599	1536686	+	acetyl-CoA synthetase	identified by match to protein family HMM PF02629	gene	gene1591	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1602
THEYE_A1603	THEYE_A1603		THEYE_A1603	1536710	1537765	+	cobyrinic Acid a%2Cc-diamide synthase family protein%2C putative	identified by match to protein family HMM PF07085	gene	gene1592	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1603
THEYE_A1604	THEYE_A1604	argB1	argB1	1537762	1538637	+	acetylglutamate kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00761	gene	gene1593	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1604
THEYE_A1605	THEYE_A1605		THEYE_A1605	1538637	1539347	+	conserved hypothetical protein	identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046	gene	gene1594	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1605
THEYE_A1606	THEYE_A1606		THEYE_A1606	1539385	1539762	+	conserved hypothetical protein	identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090	gene	gene1595	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1606
THEYE_A1607	THEYE_A1607		THEYE_A1607	1539728	1540477	-	protein TonB%2C putative	identified by match to protein family HMM TIGR01352	gene	gene1596	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1607
THEYE_A1608	THEYE_A1608		THEYE_A1608	1540482	1541618	-	geranylgeranyl hydrogenase%2C putative	identified by match to protein family HMM PF01494%3B match to protein family HMM TIGR02032	gene	gene1597	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1608
THEYE_A1609	THEYE_A1609		THEYE_A1609	1541624	1542064	-	universal stress protein family	identified by match to protein family HMM PF00582	gene	gene1598	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1609
THEYE_A1610	THEYE_A1610		THEYE_A1610	1542074	1542835	-	transcriptional regulator	identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671	gene	gene1599	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1610
THEYE_A1611	THEYE_A1611		THEYE_A1611	1542835	1543635	-	biotin-[acetyl-CoA-carboxylase] ligase	identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM TIGR00121	gene	gene1600	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1611
THEYE_A1612	THEYE_A1612		THEYE_A1612	1543639	1544259	-	metal dependent hydrolase		gene	gene1601	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1612
THEYE_A1613	THEYE_A1613		THEYE_A1613	1544357	1544436	+	tRNA-Pro		tRNA	gene1602	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1613
THEYE_A1614	THEYE_A1614		THEYE_A1614	1544788	1546749	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1603	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1614
THEYE_A1615	THEYE_A1615		THEYE_A1615	1546938	1548149	+	pilin inverting protein%2C putative	identified by match to protein family HMM PF01548%3B match to protein family HMM PF02371	gene	gene1604	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1615
THEYE_A1616	THEYE_A1616		THEYE_A1616	1548387	1549205	+	conserved hypothetical protein	identified by match to protein family HMM PF02596	gene	gene1605	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1616
THEYE_A1617	THEYE_A1617		THEYE_A1617	1549222	1549848	+	transcriptional regulator%2C TetR family	identified by match to protein family HMM PF00440	gene	gene1606	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1617
THEYE_A1618	THEYE_A1618		THEYE_A1618	1549918	1551063	+	acriflavine resistance protein A	identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730	gene	gene1607	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1618
THEYE_A1619	THEYE_A1619		THEYE_A1619	1551063	1554194	+	AcrB protein	identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915	gene	gene1608	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1619
THEYE_A1620	THEYE_A1620		THEYE_A1620	1554245	1555642	+	outer membrane protein OprM	identified by match to protein family HMM PF02321%3B match to protein family HMM TIGR01845	gene	gene1609	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1620
THEYE_A1621	THEYE_A1621		THEYE_A1621	1555645	1556589	+	universal stress protein family		gene	gene1610	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1621
THEYE_A1622	THEYE_A1622		THEYE_A1622	1556800	1557195	+	conserved hypothetical protein	identified by match to protein family HMM PF01850%3B match to protein family HMM TIGR00305	gene	gene1611	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1622
THEYE_A1623	THEYE_A1623		THEYE_A1623	1557198	1558322	-	ABC-2 type transporter	identified by match to protein family HMM PF01061	gene	gene1612	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1623
THEYE_A1624	THEYE_A1624		THEYE_A1624	1558319	1559452	-	ATPase component ABC-type multidrug transport system	identified by match to protein family HMM PF01061	gene	gene1613	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1624
THEYE_A1625	THEYE_A1625		THEYE_A1625	1559598	1559993	+	nucleotidyltransferase%2C putative	identified by match to protein family HMM PF01909	gene	gene1614	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1625
THEYE_A1626	THEYE_A1626		THEYE_A1626	1559986	1560408	+	protein of unknown function	identified by match to protein family HMM PF01934	gene	gene1615	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1626
THEYE_A1627	THEYE_A1627		THEYE_A1627	1560405	1562159	-	ABC transporter ATP-binding component	identified by match to protein family HMM PF00005	gene	gene1616	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1627
THEYE_A1628	THEYE_A1628		THEYE_A1628	1562289	1563239	-	HlyD family secretion protein%2C putative	identified by match to protein family HMM PF00529	gene	gene1617	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1628
THEYE_A1629	THEYE_A1629		THEYE_A1629	1563319	1563690	+	conserved hypothetical protein		gene	gene1618	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1629
THEYE_A1630	THEYE_A1630		THEYE_A1630	1563687	1563778	-	tRNA-Ser		tRNA	gene1619	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1630
THEYE_A1631	THEYE_A1631	trmU2	trmU2	1563817	1564845	+	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	identified by match to protein family HMM PF02568%3B match to protein family HMM PF03054%3B match to protein family HMM TIGR00420	gene	gene1620	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1631
THEYE_A1632	THEYE_A1632	argC2	argC2	1564820	1565860	-	N-acetyl-gamma-glutamyl-phosphate reductase	identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01850	gene	gene1621	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1632
THEYE_A1633	THEYE_A1633	rplI2	rplI2	1565862	1566248	-	ribosomal protein S9	identified by match to protein family HMM PF00380	gene	gene1622	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1633
THEYE_A1634	THEYE_A1634	rplM2	rplM2	1566266	1566697	-	ribosomal protein L13	identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066	gene	gene1623	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1634
THEYE_A1635	THEYE_A1635		THEYE_A1635	1566845	1567585	-	metallo-beta-lactamase family protein	identified by match to protein family HMM PF00753	gene	gene1624	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1635
THEYE_A1636	THEYE_A1636		THEYE_A1636	1567826	1568608	+	electron transfer flavoprotein beta-subunit	identified by match to protein family HMM PF01012	gene	gene1625	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1636
THEYE_A1637	THEYE_A1637		THEYE_A1637	1568599	1569780	+	electron transfer flavoprotein alpha-subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00766%3B match to protein family HMM PF01012	gene	gene1626	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1637
THEYE_A1638	THEYE_A1638	fabD2	fabD2	1569777	1570694	+	malonyl CoA-acyl carrier protein transacylase	identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128	gene	gene1627	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1638
THEYE_A1639	THEYE_A1639	mdh2	mdh2	1570713	1571651	+	malate dehydrogenase%2C NAD-dependent	identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01763	gene	gene1628	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1639
THEYE_A1640	THEYE_A1640		THEYE_A1640	1571651	1572064	+	nucleoside diphosphate kinase	identified by match to protein family HMM PF00334	gene	gene1629	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1640
THEYE_A1641	THEYE_A1641		THEYE_A1641	1572050	1572634	-	nudix hydrolase 3	identified by match to protein family HMM PF00293	gene	gene1630	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1641
THEYE_A1642	THEYE_A1642		THEYE_A1642	1572764	1574587	-	putative Carbon starvation protein A	identified by match to protein family HMM PF02554	gene	gene1631	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1642
THEYE_A1643	THEYE_A1643		THEYE_A1643	1574944	1575717	-	sensory transduction protein LytT	identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397	gene	gene1632	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1643
THEYE_A1644	THEYE_A1644		THEYE_A1644	1575692	1577398	-	sensor protein LytS	identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694	gene	gene1633	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1644
THEYE_A1645	THEYE_A1645		THEYE_A1645	1577441	1578184	-	ABC-2 type transporter superfamily	identified by match to protein family HMM PF01061	gene	gene1634	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1645
THEYE_A1646	THEYE_A1646		THEYE_A1646	1578181	1579032	-	ABC-type multidrug transport system%2C ATPase component	identified by match to protein family HMM PF00005	gene	gene1635	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1646
THEYE_A1647	THEYE_A1647		THEYE_A1647	1579029	1580783	-	ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent	identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM TIGR02504	gene	gene1636	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1647
THEYE_A1648	THEYE_A1648		THEYE_A1648	1580842	1581060	+	putative zinc-binding protein	identified by match to protein family HMM PF03884	gene	gene1637	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1648
THEYE_A1649	THEYE_A1649	dapB2	dapB2	1581014	1581817	+	dihydrodipicolinate reductase	identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036	gene	gene1638	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1649
THEYE_A1650	THEYE_A1650		THEYE_A1650	1581843	1582328	-	rubrerythrin subfamily	identified by match to protein family HMM PF02915	gene	gene1639	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1650
THEYE_A1651	THEYE_A1651		THEYE_A1651	1582343	1582504	-	rubredoxin	identified by match to protein family HMM PF00301	gene	gene1640	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1651
THEYE_A1652	THEYE_A1652		THEYE_A1652	1582599	1584809	+	penicillin-binding protein 1	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene1641	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1652
THEYE_A1653	THEYE_A1653	panE2	panE2	1584812	1585750	+	2-dehydropantoate 2-reductase	identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745	gene	gene1642	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1653
THEYE_A1654	THEYE_A1654		THEYE_A1654	1585802	1587889	+	acetyl-CoA synthetase	identified by match to protein family HMM PF02629	gene	gene1643	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1654
THEYE_A1655	THEYE_A1655		THEYE_A1655	1587913	1588968	+	cobyrinic Acid a%2Cc-diamide synthase family protein%2C putative	identified by match to protein family HMM PF07085	gene	gene1644	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1655
THEYE_A1656	THEYE_A1656	argB2	argB2	1588965	1589840	+	acetylglutamate kinase	identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00761	gene	gene1645	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1656
THEYE_A1657	THEYE_A1657		THEYE_A1657	1589840	1590550	+	conserved hypothetical protein	identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046	gene	gene1646	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1657
THEYE_A1658	THEYE_A1658		THEYE_A1658	1590588	1590965	+	conserved hypothetical protein	identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090	gene	gene1647	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1658
THEYE_A1659	THEYE_A1659		THEYE_A1659	1590931	1591680	-	protein TonB%2C putative	identified by match to protein family HMM TIGR01352	gene	gene1648	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1659
THEYE_A1661	THEYE_A1661		THEYE_A1661	1592827	1593267	-	universal stress protein family	identified by match to protein family HMM PF00582	gene	gene1649	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1661
THEYE_A1662	THEYE_A1662		THEYE_A1662	1593277	1594038	-	transcriptional regulator	identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671	gene	gene1650	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1662
THEYE_A1663	THEYE_A1663		THEYE_A1663	1594038	1594838	-	biotin-[acetyl-CoA-carboxylase] ligase	identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM TIGR00121	gene	gene1651	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1663
THEYE_A1664	THEYE_A1664		THEYE_A1664	1594842	1595462	-	metal dependent hydrolase		gene	gene1652	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1664
THEYE_A1665	THEYE_A1665		THEYE_A1665	1595560	1595639	+	tRNA-Pro		tRNA	gene1653	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1665
THEYE_A1666	THEYE_A1666		THEYE_A1666	1595991	1597952	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1654	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1666
THEYE_A1667	THEYE_A1667		THEYE_A1667	1598141	1599352	+	pilin inverting protein%2C putative	identified by match to protein family HMM PF01548%3B match to protein family HMM PF02371	gene	gene1655	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1667
THEYE_A1668	THEYE_A1668		THEYE_A1668	1599593	1599796	+	conserved hypothetical protein		gene	gene1656	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1668
THEYE_A1669	THEYE_A1669		THEYE_A1669	1599790	1600200	+	PIN domain protein	identified by match to protein family HMM PF01850	gene	gene1657	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1669
THEYE_A1670	THEYE_A1670		THEYE_A1670	1600542	1600706	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1658	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1670
THEYE_A1671	THEYE_A1671	pdxJ	pdxJ	1600846	1601574	+	pyridoxal phosphate biosynthetic protein PdxJ	identified by match to protein family HMM PF03740%3B match to protein family HMM TIGR00559	gene	gene1659	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1671
THEYE_A1672	THEYE_A1672	xseA	xseA	1601567	1603033	+	exodeoxyribonuclease VII%2C large subunit	identified by match to protein family HMM PF02601%3B match to protein family HMM TIGR00237	gene	gene1660	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1672
THEYE_A1673	THEYE_A1673		THEYE_A1673	1603011	1603232	+	conserved hypothetical protein		gene	gene1661	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1673
THEYE_A1674	THEYE_A1674		THEYE_A1674	1603233	1603991	+	RNA methyltransferase%2C TrmH family%2C group 1	identified by match to protein family HMM PF00588%3B match to protein family HMM TIGR00050	gene	gene1662	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1674
THEYE_A1675	THEYE_A1675		THEYE_A1675	1604026	1605126	-	radical SAM domain protein	identified by match to protein family HMM PF04055	gene	gene1663	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1675
THEYE_A1676	THEYE_A1676		THEYE_A1676	1605245	1606021	+	toluene tolerance protein Ttg2B	identified by match to protein family HMM PF02405	gene	gene1664	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1676
THEYE_A1677	THEYE_A1677		THEYE_A1677	1606018	1606761	+	ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005	gene	gene1665	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1677
THEYE_A1678	THEYE_A1678	thrC1	thrC1	1606840	1608087	+	threonine synthase	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260	gene	gene1666	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1678
THEYE_A1679	THEYE_A1679		THEYE_A1679	1608090	1608368	+	PdtH	identified by match to protein family HMM PF02597	gene	gene1667	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1679
THEYE_A1680	THEYE_A1680		THEYE_A1680	1608380	1608628	+	ferredoxin		gene	gene1668	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1680
THEYE_A1681	THEYE_A1681	thrC2	thrC2	1608631	1609704	+	threonine synthase	identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260	gene	gene1669	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1681
THEYE_A1682	THEYE_A1682		THEYE_A1682	1609701	1610912	+	proposed homoserine kinase	identified by match to protein family HMM PF01676%3B match to protein family HMM TIGR00306%3B match to protein family HMM TIGR02535	gene	gene1670	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1682
THEYE_A1683	THEYE_A1683		THEYE_A1683	1610905	1611540	+	DedA protein	identified by match to protein family HMM PF09335	gene	gene1671	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1683
THEYE_A1684	THEYE_A1684		THEYE_A1684	1611537	1612259	+	rhomboid family protein	identified by match to protein family HMM PF01694	gene	gene1672	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1684
THEYE_A1685	THEYE_A1685	glnA	glnA	1612300	1613634	-	glutamine synthetase%2C type I	identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951%3B match to protein family HMM TIGR00653	gene	gene1673	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1685
THEYE_A1686	THEYE_A1686		THEYE_A1686	1614289	1615398	+	conserved hypothetical protein		gene	gene1674	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1686
THEYE_A1687	THEYE_A1687		THEYE_A1687	1615377	1617044	+	glutamate synthase%2C iron-sulfur cluster-binding subunit%2C putative	identified by match to protein family HMM PF00037%3B match to protein family HMM PF01645	gene	gene1675	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1687
THEYE_A1688	THEYE_A1688		THEYE_A1688	1617034	1619451	+	pyridine nucleotide-disulfide oxidoreductase	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF01493%3B match to protein family HMM PF07992	gene	gene1676	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1688
THEYE_A1689	THEYE_A1689		THEYE_A1689	1619457	1620914	-	type I restriction enzyme EcoKI M protein	identified by match to protein family HMM PF01170%3B match to protein family HMM PF02384	gene	gene1677	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1689
THEYE_A1690	THEYE_A1690		THEYE_A1690	1620936	1621247	-	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene1678	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1690
THEYE_A1691	THEYE_A1691		THEYE_A1691	1621226	1621606	-	hepn domain%2C putative	identified by match to protein family HMM PF05168	gene	gene1679	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1691
THEYE_A1692	THEYE_A1692		THEYE_A1692	1621599	1621946	-	type I restriction enzyme EcoAI specificity protein		gene	gene1680	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1692
THEYE_A1693	THEYE_A1693		THEYE_A1693	1621807	1623021	-	restriction endonuclease S subunit	identified by match to protein family HMM PF01420	gene	gene1681	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1693
THEYE_A1694	THEYE_A1694		THEYE_A1694	1622981	1626004	-	ATPase involved in DNA repair%2C putative		gene	gene1682	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1694
THEYE_A1695	THEYE_A1695		THEYE_A1695	1626017	1626781	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1683	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1695
THEYE_A1696	THEYE_A1696		THEYE_A1696	1626778	1627251	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1684	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1696
THEYE_A1697	THEYE_A1697		THEYE_A1697	1627258	1630008	-	type I site-specific deoxyribonuclease	identified by match to protein family HMM PF00270%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851	gene	gene1685	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1697
THEYE_A1698	THEYE_A1698		THEYE_A1698	1630135	1630809	+	iron-sulfur cluster-binding protein	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR01409	gene	gene1686	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1698
THEYE_A1699	THEYE_A1699		THEYE_A1699	1630820	1632628	+	tungsten-containing aldehyde ferredoxin oxidoreductase	identified by match to protein family HMM PF01314%3B match to protein family HMM PF02730	gene	gene1687	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1699
THEYE_A1700	THEYE_A1700		THEYE_A1700	1632756	1633130	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1688	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1700
THEYE_A1701	THEYE_A1701		THEYE_A1701	1633123	1633512	+	PIN domain%2C putative	identified by match to protein family HMM PF01850	gene	gene1689	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1701
THEYE_A1702	THEYE_A1702		THEYE_A1702	1633516	1634205	-	conserved protein	identified by match to protein family HMM PF00117	gene	gene1690	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1702
THEYE_A1703	THEYE_A1703		THEYE_A1703	1634189	1635724	-	transcriptional regulator	identified by match to protein family HMM PF00158%3B match to protein family HMM PF01590%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene1691	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1703
THEYE_A1704	THEYE_A1704		THEYE_A1704	1635820	1635960	-	conserved hypothetical protein		gene	gene1692	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1704
THEYE_A1705	THEYE_A1705		THEYE_A1705	1636034	1636147	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1693	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1705
THEYE_A1706	THEYE_A1706		THEYE_A1706	1636242	1636580	-	nitrogen regulatory protein P-II	identified by match to protein family HMM PF00543	gene	gene1694	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1706
THEYE_A1707	THEYE_A1707	amt	amt	1636595	1637938	-	ammonium transporter	identified by match to protein family HMM PF00909%3B match to protein family HMM TIGR00836	gene	gene1695	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1707
THEYE_A1708	THEYE_A1708		THEYE_A1708	1637951	1638787	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1696	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1708
THEYE_A1709	THEYE_A1709		THEYE_A1709	1639137	1640483	-	methyl-accepting chemotaxis protein%2C putative	identified by match to protein family HMM PF00015	gene	gene1697	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1709
THEYE_A1710	THEYE_A1710		THEYE_A1710	1640712	1641593	-	nitrogen fixation protein	identified by match to protein family HMM PF04055	gene	gene1698	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1710
THEYE_A1711	THEYE_A1711		THEYE_A1711	1641574	1641993	-	nitrogen regulatory protein P-II	identified by match to protein family HMM PF00543	gene	gene1699	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1711
THEYE_A1712	THEYE_A1712		THEYE_A1712	1641990	1642307	-	nitrogen regulatory protein P-II	identified by match to protein family HMM PF00543	gene	gene1700	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1712
THEYE_A1713	THEYE_A1713	nifX	nifX	1642310	1642711	-	nitrogen fixation protein NifX	identified by match to protein family HMM PF02579%3B match to protein family HMM TIGR02663	gene	gene1701	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1713
THEYE_A1714	THEYE_A1714		THEYE_A1714	1642711	1645266	-	NifEN2	identified by match to protein family HMM PF00148%3B match to protein family HMM TIGR01283%3B match to protein family HMM TIGR01285	gene	gene1702	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1714
THEYE_A1715	THEYE_A1715	nifK	nifK	1645276	1646787	-	nitrogenase molybdenum-iron protein beta chain	identified by match to protein family HMM PF00148%3B match to protein family HMM TIGR01286	gene	gene1703	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1715
THEYE_A1716	THEYE_A1716	nifD	nifD	1646784	1648223	-	nitrogenase molybdenum-iron protein alpha chain	identified by match to protein family HMM PF00148%3B match to protein family HMM TIGR01282%3B match to protein family HMM TIGR01862	gene	gene1704	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1716
THEYE_A1717	THEYE_A1717	nifH	nifH	1648241	1649065	-	nitrogenase iron protein	identified by match to protein family HMM PF00142%3B match to protein family HMM TIGR01287	gene	gene1705	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1717
THEYE_A1718	THEYE_A1718		THEYE_A1718	1649457	1650449	-	biotin synthase family enzyme	identified by match to protein family HMM PF04055	gene	gene1706	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1718
THEYE_A1719	THEYE_A1719		THEYE_A1719	1650442	1651713	-	GTP-binding protein	identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231	gene	gene1707	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1719
THEYE_A1720	THEYE_A1720		THEYE_A1720	1651710	1652042	-	conserved hypothetical protein		gene	gene1708	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1720
THEYE_A1721	THEYE_A1721		THEYE_A1721	1652017	1653522	-	thiamine biosynthesis enzyme	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968	gene	gene1709	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1721
THEYE_A1722	THEYE_A1722		THEYE_A1722	1653519	1654937	-	aspartate ammonia-lyase	identified by match to protein family HMM PF00206	gene	gene1710	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1722
THEYE_A1723	THEYE_A1723		THEYE_A1723	1654934	1655194	-	conserved hypothetical protein		gene	gene1711	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1723
THEYE_A1724	THEYE_A1724		THEYE_A1724	1655285	1655566	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1712	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1724
THEYE_A1725	THEYE_A1725		THEYE_A1725	1655609	1655935	-	periplasmic Fe hydrogenase%2C small subunit	identified by match to protein family HMM PF02256%3B match to protein family HMM TIGR01409	gene	gene1713	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1725
THEYE_A1726	THEYE_A1726		THEYE_A1726	1655932	1657329	-	hydrogenase	identified by match to protein family HMM PF00037%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512	gene	gene1714	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1726
THEYE_A1727	THEYE_A1727		THEYE_A1727	1657348	1659117	-	hydrogenase-1	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00111%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512	gene	gene1715	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1727
THEYE_A1728	THEYE_A1728		THEYE_A1728	1659136	1659960	-	F420-non-reducing hydrogenase vhc iron-sulfur subunit D	identified by match to protein family HMM PF02662	gene	gene1716	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1728
THEYE_A1729	THEYE_A1729	kdsA	kdsA	1660216	1661031	-	3-deoxy-8-phosphooctulonate synthase	identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01362	gene	gene1717	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1729
THEYE_A1730	THEYE_A1730		THEYE_A1730	1661028	1662008	-	lipoprotein%2C putative		gene	gene1718	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1730
THEYE_A1731	THEYE_A1731	bioA	bioA	1662031	1663386	-	adenosylmethionine-8-amino-7-oxononanoate transaminase	identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508	gene	gene1719	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1731
THEYE_A1732	THEYE_A1732		THEYE_A1732	1663456	1663782	+	conserved hypothetical protein	identified by match to protein family HMM PF02635	gene	gene1720	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1732
THEYE_A1733	THEYE_A1733		THEYE_A1733	1663786	1664229	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1721	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1733
THEYE_A1734	THEYE_A1734		THEYE_A1734	1664230	1664949	-	4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate synthesis protein ThiF	identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237	gene	gene1722	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1734
THEYE_A1735	THEYE_A1735	trpS	trpS	1664937	1665923	-	tryptophanyl-tRNA synthetase	identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233	gene	gene1723	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1735
THEYE_A1736	THEYE_A1736		THEYE_A1736	1665933	1666589	-	transmembrane protein	identified by match to protein family HMM PF02163	gene	gene1724	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1736
THEYE_A1737	THEYE_A1737	oadA	oadA	1666589	1668415	-	oxaloacetate decarboxylase alpha subunit	identified by match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02436%3B match to protein family HMM TIGR01108	gene	gene1725	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1737
THEYE_A1738	THEYE_A1738	accC2	accC2	1668437	1669852	-	acetyl-CoA carboxylase%2C biotin carboxylase	identified by match to protein family HMM PF00289%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR00514	gene	gene1726	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1738
THEYE_A1739	THEYE_A1739		THEYE_A1739	1670000	1670899	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1727	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1739
THEYE_A1740	THEYE_A1740		THEYE_A1740	1670910	1671983	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1728	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1740
THEYE_A1741	THEYE_A1741		THEYE_A1741	1671986	1674112	+	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF00595%3B match to protein family HMM PF07719	gene	gene1729	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1741
THEYE_A1742	THEYE_A1742		THEYE_A1742	1674136	1675209	+	conserved hypothetical protein	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00423	gene	gene1730	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1742
THEYE_A1743	THEYE_A1743		THEYE_A1743	1675231	1675494	+	conserved hypothetical protein		gene	gene1731	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1743
THEYE_A1744	THEYE_A1744		THEYE_A1744	1675469	1675816	+	conserved protein		gene	gene1732	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1744
THEYE_A1745	THEYE_A1745		THEYE_A1745	1675826	1676869	+	conserved hypothetical protein	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00423	gene	gene1733	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1745
THEYE_A1746	THEYE_A1746		THEYE_A1746	1676869	1677132	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1734	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1746
THEYE_A1747	THEYE_A1747	gidA3	gidA3	1677146	1678084	+	glucose inhibited division protein A	identified by match to protein family HMM PF01134%3B match to protein family HMM PF03486%3B match to protein family HMM PF07723%3B match to protein family HMM PF07992	gene	gene1735	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1747
THEYE_A1748	THEYE_A1748		THEYE_A1748	1678077	1678505	+	heat repeat domain protein	identified by match to protein family HMM PF02985	gene	gene1736	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1748
THEYE_A1749	THEYE_A1749		THEYE_A1749	1678502	1678912	+	protein of unknown function	identified by match to protein family HMM PF01951	gene	gene1737	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1749
THEYE_A1750	THEYE_A1750		THEYE_A1750	1679238	1680686	+	replication factor C subunit	identified by match to protein family HMM PF01139	gene	gene1738	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1750
THEYE_A1751	THEYE_A1751		THEYE_A1751	1680683	1681468	+	conserved hypothetical protein	identified by match to protein family HMM PF02621	gene	gene1739	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1751
THEYE_A1752	THEYE_A1752		THEYE_A1752	1681460	1683088	-	phosphoglucomutase/phosphomannomutase family protein	identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880	gene	gene1740	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1752
THEYE_A1753	THEYE_A1753		THEYE_A1753	1683510	1685921	+	ATP-dependent protease La		gene	gene1741	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1753
THEYE_A1754	THEYE_A1754		THEYE_A1754	1685929	1686732	-	probable ABC transporter%2C putative	identified by match to protein family HMM PF00950	gene	gene1742	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1754
THEYE_A1755	THEYE_A1755		THEYE_A1755	1686725	1687438	-	ABC transporter	identified by match to protein family HMM PF00005	gene	gene1743	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1755
THEYE_A1756	THEYE_A1756		THEYE_A1756	1687435	1688316	-	high-affinity zinc uptake system protein ZnuA%2C putative	identified by match to protein family HMM PF01297	gene	gene1744	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1756
THEYE_A1757	THEYE_A1757	dnaJ1	dnaJ1	1688340	1689440	-	chaperone protein DnaJ	identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349	gene	gene1745	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1757
THEYE_A1758	THEYE_A1758	dnaK	dnaK	1689437	1691335	-	chaperone protein DnaK	identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350	gene	gene1746	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1758
THEYE_A1759	THEYE_A1759	grpE	grpE	1691338	1691961	-	co-chaperone GrpE	identified by match to protein family HMM PF01025	gene	gene1747	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1759
THEYE_A1760	THEYE_A1760	hrcA	hrcA	1691975	1693021	-	heat-inducible transcription repressor HrcA	identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331	gene	gene1748	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1760
THEYE_A1761	THEYE_A1761	speE	speE	1693091	1693927	-	spermidine synthase	identified by match to protein family HMM PF01564%3B match to protein family HMM TIGR00417	gene	gene1749	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1761
THEYE_A1762	THEYE_A1762		THEYE_A1762	1693938	1695056	-	ornithine decarboxylase	identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784	gene	gene1750	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1762
THEYE_A1763	THEYE_A1763		THEYE_A1763	1695096	1696169	+	P-protein	identified by match to protein family HMM PF00800%3B match to protein family HMM PF01817%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR01807	gene	gene1751	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1763
THEYE_A1764	THEYE_A1764	hisC2	hisC2	1696184	1697293	+	histidinol-phosphate aminotransferase	identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01141	gene	gene1752	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1764
THEYE_A1765	THEYE_A1765	aroF2	aroF2	1697297	1698322	+	phospho-2-dehydro-3-deoxyheptonate aldolase	identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01361	gene	gene1753	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1765
THEYE_A1766	THEYE_A1766		THEYE_A1766	1698325	1699179	+	prephenate dehydrogenase	identified by match to protein family HMM PF01210%3B match to protein family HMM PF02153%3B match to protein family HMM PF03446	gene	gene1754	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1766
THEYE_A1767	THEYE_A1767	aroA	aroA	1699176	1700468	+	3-phosphoshikimate 1-carboxyvinyltransferase	identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356	gene	gene1755	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1767
THEYE_A1768	THEYE_A1768	cmk	cmk	1700465	1701133	+	cytidylate kinase	identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017	gene	gene1756	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1768
THEYE_A1769	THEYE_A1769	ispH	ispH	1701157	1702026	+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	identified by match to protein family HMM PF02401%3B match to protein family HMM TIGR00216	gene	gene1757	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1769
THEYE_A1770	THEYE_A1770		THEYE_A1770	1702041	1703645	+	30S ribosomal protein S1	identified by match to protein family HMM PF00575	gene	gene1758	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1770
THEYE_A1771	THEYE_A1771	sppA	sppA	1703635	1704492	+	signal peptide peptidase SppA%2C 36K type	identified by match to protein family HMM PF00574%3B match to protein family HMM PF01343%3B match to protein family HMM TIGR00706	gene	gene1759	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1771
THEYE_A1772	THEYE_A1772		THEYE_A1772	1704507	1704785	+	DNA-binding protein HU 1	identified by match to protein family HMM PF00216	gene	gene1760	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1772
THEYE_A1773	THEYE_A1773		THEYE_A1773	1704787	1705707	+	oligopeptide transport ATP-binding protein OppD	identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727	gene	gene1761	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1773
THEYE_A1774	THEYE_A1774	phoU	phoU	1705712	1706416	-	phosphate transport system regulatory protein PhoU	identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135	gene	gene1762	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1774
THEYE_A1775	THEYE_A1775	pstS1	pstS1	1706652	1707683	+	phosphate ABC transporter%2C phosphate-binding protein PstS	identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR00975	gene	gene1763	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1775
THEYE_A1776	THEYE_A1776		THEYE_A1776	1707817	1709421	-	reductase%2C iron-sulfur binding subunit	identified by match to protein family HMM PF00037	gene	gene1764	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1776
THEYE_A1777	THEYE_A1777		THEYE_A1777	1709432	1710316	-	conserved hypothetical protein		gene	gene1765	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1777
THEYE_A1778	THEYE_A1778	pstS2	pstS2	1710547	1711557	+	phosphate ABC transporter%2C phosphate-binding protein PstS	identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR00975	gene	gene1766	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1778
THEYE_A1779	THEYE_A1779	aroD	aroD	1711593	1712273	-	3-dehydroquinate dehydratase%2C type I	identified by match to protein family HMM PF01487%3B match to protein family HMM TIGR01093	gene	gene1767	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1779
THEYE_A1780	THEYE_A1780		THEYE_A1780	1712379	1712762	-	regulatory components of sensory transduction system	identified by match to protein family HMM PF00072	gene	gene1768	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1780
THEYE_A1781	THEYE_A1781		THEYE_A1781	1712784	1712990	-	serine/threonine protein phosphatase		gene	gene1769	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1781
THEYE_A1782	THEYE_A1782		THEYE_A1782	1713009	1714559	-	alkaline phosphatase	identified by match to protein family HMM PF00245	gene	gene1770	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1782
THEYE_A1783	THEYE_A1783		THEYE_A1783	1714573	1715745	-	ceramide glucosyltransferase%2C putative	identified by match to protein family HMM PF00535	gene	gene1771	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1783
THEYE_A1784	THEYE_A1784		THEYE_A1784	1715750	1716439	-	PHP domain%2C putative	identified by match to protein family HMM PF02811	gene	gene1772	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1784
THEYE_A1785	THEYE_A1785		THEYE_A1785	1716609	1717358	+	EAL domain%2C putative	identified by match to protein family HMM PF00563	gene	gene1773	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1785
THEYE_A1786	THEYE_A1786		THEYE_A1786	1717345	1718370	+	signaling protein	identified by match to protein family HMM PF00571%3B match to protein family HMM PF00990	gene	gene1774	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1786
THEYE_A1787	THEYE_A1787		THEYE_A1787	1718363	1718566	+	nitrogen assimilation sensor kinase		gene	gene1775	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1787
THEYE_A1788	THEYE_A1788		THEYE_A1788	1718802	1719059	+	sensory transduction histidine kinase	identified by match to protein family HMM PF02518	gene	gene1776	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1788
THEYE_A1789	THEYE_A1789		THEYE_A1789	1719049	1720290	+	chain A%2C Beta-Glycosidase From Pyrococcus Horikoshii	identified by match to protein family HMM PF00232	gene	gene1777	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1789
THEYE_A1790	THEYE_A1790	pstC	pstC	1720330	1721259	+	phosphate ABC transporter%2C permease protein PstC	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138	gene	gene1778	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1790
THEYE_A1791	THEYE_A1791	pstA	pstA	1721256	1722095	+	phosphate ABC transporter%2C permease protein PstA	identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974	gene	gene1779	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1791
THEYE_A1792	THEYE_A1792	pstB	pstB	1722092	1722850	+	phosphate ABC transporter%2C ATP-binding protein	identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972	gene	gene1780	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1792
THEYE_A1793	THEYE_A1793		THEYE_A1793	1722847	1723266	-	lipoprotein%2C putative		gene	gene1781	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1793
THEYE_A1794	THEYE_A1794		THEYE_A1794	1723286	1724248	-	conserved protein		gene	gene1782	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1794
THEYE_A1795	THEYE_A1795	rfaE	rfaE	1724241	1725236	-	RfaE bifunctional protein%2C domain I	identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR02198	gene	gene1783	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1795
THEYE_A1796	THEYE_A1796	hisS	hisS	1725223	1726485	-	histidyl-tRNA synthetase	identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442	gene	gene1784	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1796
THEYE_A1797	THEYE_A1797		THEYE_A1797	1726475	1726945	-	cell-division initiation protein	identified by match to protein family HMM PF05103	gene	gene1785	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1797
THEYE_A1798	THEYE_A1798		THEYE_A1798	1726942	1727250	-	yggt family protein	identified by match to protein family HMM PF02325	gene	gene1786	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1798
THEYE_A1799	THEYE_A1799	proC	proC	1727280	1728065	-	pyrroline-5-carboxylate reductase	identified by match to protein family HMM PF01210%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112	gene	gene1787	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1799
THEYE_A1800	THEYE_A1800		THEYE_A1800	1728067	1728777	-	conserved hypothetical protein	identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044	gene	gene1788	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1800
THEYE_A1801	THEYE_A1801		THEYE_A1801	1728795	1730207	+	sensor protein AtoS	identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518	gene	gene1789	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1801
THEYE_A1802	THEYE_A1802		THEYE_A1802	1730217	1731605	+	SasR	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00158%3B match to protein family HMM PF02954%3B match to protein family HMM PF07728	gene	gene1790	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1802
THEYE_A1803	THEYE_A1803		THEYE_A1803	1731746	1732192	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1791	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1803
THEYE_A1804	THEYE_A1804		THEYE_A1804	1732242	1732625	-	conserved hypothetical protein		gene	gene1792	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1804
THEYE_A1805	THEYE_A1805		THEYE_A1805	1732647	1733174	-	ChrB domain protein		gene	gene1793	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1805
THEYE_A1806	THEYE_A1806		THEYE_A1806	1733182	1734330	-	conserved protein	identified by match to protein family HMM PF07690	gene	gene1794	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1806
THEYE_A1807	THEYE_A1807		THEYE_A1807	1734483	1735331	-	universal stress protein%2C putative	identified by match to protein family HMM PF00582	gene	gene1795	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1807
THEYE_A1808	THEYE_A1808		THEYE_A1808	1735348	1736304	-	sodium/phosphate symporter	identified by match to protein family HMM PF01384	gene	gene1796	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1808
THEYE_A1809	THEYE_A1809		THEYE_A1809	1736436	1736792	+	nucleotidyltransferase domain%2C putative	identified by match to protein family HMM PF01909	gene	gene1797	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1809
THEYE_A1810	THEYE_A1810		THEYE_A1810	1736777	1737181	+	protein of unknown function		gene	gene1798	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1810
THEYE_A1811	THEYE_A1811		THEYE_A1811	1737317	1738477	+	Kef-type K+ transport system%2C membrane component	identified by match to protein family HMM PF00999	gene	gene1799	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1811
THEYE_A1812	THEYE_A1812		THEYE_A1812	1738480	1738905	+	universal stress protein	identified by match to protein family HMM PF00582	gene	gene1800	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1812
THEYE_A1813	THEYE_A1813		THEYE_A1813	1739008	1739202	+	conserved domain protein	identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411	gene	gene1801	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1813
THEYE_A1814	THEYE_A1814		THEYE_A1814	1739199	1739801	-	lipid A 1-phosphatase	identified by match to protein family HMM PF01569	gene	gene1802	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1814
THEYE_A1815	THEYE_A1815		THEYE_A1815	1739779	1741296	-	dolichyl-phosphate-mannose-protein mannosyltransferase family protein	identified by match to protein family HMM PF02366	gene	gene1803	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1815
THEYE_A1816	THEYE_A1816		THEYE_A1816	1741356	1743146	-	potassium uptake protein Kup	identified by match to protein family HMM PF02705	gene	gene1804	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1816
THEYE_A1817	THEYE_A1817	hisD	hisD	1743202	1744473	+	histidinol dehydrogenase	identified by match to protein family HMM PF00815%3B match to protein family HMM TIGR00069	gene	gene1805	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1817
THEYE_A1818	THEYE_A1818		THEYE_A1818	1744466	1744648	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1806	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1818
THEYE_A1819	THEYE_A1819		THEYE_A1819	1744664	1744969	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1807	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1819
THEYE_A1820	THEYE_A1820		THEYE_A1820	1744966	1745280	-	divalent-cation tolerance protein CutA	identified by match to protein family HMM PF03091	gene	gene1808	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1820
THEYE_A1821	THEYE_A1821		THEYE_A1821	1745344	1745631	+	conserved hypothetical protein	identified by match to protein family HMM PF08734	gene	gene1809	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1821
THEYE_A1822	THEYE_A1822		THEYE_A1822	1745667	1746833	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1810	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1822
THEYE_A1823	THEYE_A1823		THEYE_A1823	1746886	1747158	-	DNA-binding protein HU 1	identified by match to protein family HMM PF00216	gene	gene1811	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1823
THEYE_A1824	THEYE_A1824		THEYE_A1824	1747255	1748394	+	Ser/Thr protein phosphatase family protein	identified by match to protein family HMM PF00149	gene	gene1812	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1824
THEYE_A1825	THEYE_A1825		THEYE_A1825	1748384	1750411	+	DNA double-strand break repair Rad50 ATPase%2C putative		gene	gene1813	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1825
THEYE_A1826	THEYE_A1826	rpsO	rpsO	1750481	1750750	+	ribosomal protein S15	identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952	gene	gene1814	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1826
THEYE_A1827	THEYE_A1827		THEYE_A1827	1750771	1752903	+	polyribonucleotide nucleotidyltransferase	identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726	gene	gene1815	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1827
THEYE_A1828	THEYE_A1828		THEYE_A1828	1752909	1754144	+	peptidase%2C M16 family	identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193	gene	gene1816	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1828
THEYE_A1829	THEYE_A1829		THEYE_A1829	1754180	1755328	-	QmoC		gene	gene1817	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1829
THEYE_A1830	THEYE_A1830		THEYE_A1830	1755340	1757574	-	heterodisulfide reductase%2C subunit A/methylviologen reducing hydrogenase%2C subunit delta	identified by match to protein family HMM PF00037%3B match to protein family HMM PF00070%3B match to protein family HMM PF02662%3B match to protein family HMM PF07992	gene	gene1818	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1830
THEYE_A1831	THEYE_A1831		THEYE_A1831	1757577	1758824	-	CoB--CoM heterodisulfide reductase iron-sulfur subunit A 2	identified by match to protein family HMM PF00037%3B match to protein family HMM PF07992	gene	gene1819	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1831
THEYE_A1832	THEYE_A1832	aprA	aprA	1758963	1760951	-	adenylylsulfate reductase%2C alpha subunit	identified by match to protein family HMM PF00890%3B match to protein family HMM TIGR02061	gene	gene1820	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1832
THEYE_A1833	THEYE_A1833	aprB	aprB	1760976	1761404	-	adenylylsulfate reductase%2C beta subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM TIGR02060	gene	gene1821	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1833
THEYE_A1834	THEYE_A1834		THEYE_A1834	1761431	1761832	-	conserved hypothetical protein		gene	gene1822	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1834
THEYE_A1835	THEYE_A1835	sat	sat	1761845	1763230	-	sulfate adenylyltransferase	identified by match to protein family HMM PF01747%3B match to protein family HMM TIGR00339	gene	gene1823	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1835
THEYE_A1836	THEYE_A1836		THEYE_A1836	1763249	1763896	-	adenylate kinase	identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351	gene	gene1824	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1836
THEYE_A1837	THEYE_A1837	rdgB	rdgB	1763983	1764597	-	non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family	identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042	gene	gene1825	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1837
THEYE_A1838	THEYE_A1838		THEYE_A1838	1764642	1764720	+	tRNA-Met		tRNA	gene1826	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1838
THEYE_A1839	THEYE_A1839	ftsY	ftsY	1764720	1765625	-	signal recognition particle-docking protein FtsY	identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064	gene	gene1827	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1839
THEYE_A1840	THEYE_A1840		THEYE_A1840	1765625	1767373	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1828	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1840
THEYE_A1841	THEYE_A1841		THEYE_A1841	1767513	1767920	+	RDD family%2C putative	identified by match to protein family HMM PF06271	gene	gene1829	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1841
THEYE_A1842	THEYE_A1842		THEYE_A1842	1767969	1769000	+	rod shape-determining protein MreB	identified by match to protein family HMM PF02491%3B match to protein family HMM PF06723%3B match to protein family HMM TIGR00904	gene	gene1830	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1842
THEYE_A1843	THEYE_A1843	mreC	mreC	1769000	1769764	+	rod shape-determining protein MreC	identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219	gene	gene1831	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1843
THEYE_A1844	THEYE_A1844		THEYE_A1844	1769761	1770249	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1832	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1844
THEYE_A1845	THEYE_A1845		THEYE_A1845	1770246	1771997	+	penicillin-binding protein 2	identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM TIGR03423	gene	gene1833	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1845
THEYE_A1846	THEYE_A1846	mrdB	mrdB	1771984	1773111	+	rod shape-determining protein RodA	identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02210	gene	gene1834	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1846
THEYE_A1847	THEYE_A1847	ribH	ribH	1773125	1773589	+	6%2C7-dimethyl-8-ribityllumazine synthase	identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114	gene	gene1835	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1847
THEYE_A1848	THEYE_A1848	nusB	nusB	1773620	1774075	+	transcription antitermination factor NusB	identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951	gene	gene1836	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1848
THEYE_A1849	THEYE_A1849		THEYE_A1849	1774440	1775699	+	helix-turn-helix domain protein	identified by match to protein family HMM PF01381%3B match to protein family HMM PF07883	gene	gene1837	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1849
THEYE_A1850	THEYE_A1850		THEYE_A1850	1775821	1777404	+	glutamate synthase-related protein	identified by match to protein family HMM PF01645	gene	gene1838	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1850
THEYE_A1851	THEYE_A1851		THEYE_A1851	1777539	1778606	+	hydrogenase		gene	gene1839	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1851
THEYE_A1852	THEYE_A1852		THEYE_A1852	1778588	1779424	+	NiFe hydrogenase gamma subunit	identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970%3B match to protein family HMM PF08022	gene	gene1840	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1852
THEYE_A1853	THEYE_A1853		THEYE_A1853	1779424	1780170	+	F420-non-reducing hydrogenase vhu subunit G	identified by match to protein family HMM PF01058	gene	gene1841	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1853
THEYE_A1854	THEYE_A1854		THEYE_A1854	1780167	1781495	+	hydrogenase/sulfur reductase%2C alpha subunit	identified by match to protein family HMM PF00374	gene	gene1842	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1854
THEYE_A1855	THEYE_A1855		THEYE_A1855	1781478	1781870	-	helix-turn-helix domain protein	identified by match to protein family HMM PF01381	gene	gene1843	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1855
THEYE_A1856	THEYE_A1856		THEYE_A1856	1781867	1782181	-	conserved hypothetical protein	identified by match to protein family HMM PF05973	gene	gene1844	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1856
THEYE_A1857	THEYE_A1857		THEYE_A1857	1782349	1783197	-	MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	identified by match to protein family HMM PF00037%3B match to protein family HMM PF01656	gene	gene1845	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1857
THEYE_A1858	THEYE_A1858		THEYE_A1858	1783194	1783844	-	SAM-dependent methyltransferase%2C UbiE/COQ5 family	identified by match to protein family HMM PF08241%3B match to protein family HMM PF08242	gene	gene1846	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1858
THEYE_A1859	THEYE_A1859		THEYE_A1859	1783834	1784565	-	metal dependent hydrolase	identified by match to protein family HMM PF00753	gene	gene1847	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1859
THEYE_A1860	THEYE_A1860		THEYE_A1860	1784567	1785409	-	ParA family protein	identified by match to protein family HMM PF01656	gene	gene1848	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1860
THEYE_A1861	THEYE_A1861		THEYE_A1861	1785702	1786004	-	conserved protein	identified by match to protein family HMM PF02579	gene	gene1849	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1861
THEYE_A1862	THEYE_A1862		THEYE_A1862	1786028	1786396	-	iron-molybdenum cofactor-binding protein	identified by match to protein family HMM PF02579	gene	gene1850	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1862
THEYE_A1863	THEYE_A1863		THEYE_A1863	1786407	1786784	-	conserved hypothetical protein	identified by match to protein family HMM PF08821	gene	gene1851	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1863
THEYE_A1864	THEYE_A1864		THEYE_A1864	1786827	1787135	-	conserved protein		gene	gene1852	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1864
THEYE_A1865	THEYE_A1865		THEYE_A1865	1787845	1788318	+	ferric uptake regulation protein	identified by match to protein family HMM PF01475	gene	gene1853	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1865
THEYE_A1866	THEYE_A1866		THEYE_A1866	1788337	1789080	-	hypothetical membrane protein%2C conserved%2C DUF81 family	identified by match to protein family HMM PF01925	gene	gene1854	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1866
THEYE_A1867	THEYE_A1867		THEYE_A1867	1789077	1789718	-	formylmethanofuran dehydrogenase subunit E	identified by match to protein family HMM PF02663	gene	gene1855	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1867
THEYE_A1868	THEYE_A1868		THEYE_A1868	1790310	1791065	+	conserved hypothetical protein	identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033	gene	gene1856	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1868
THEYE_A1869	THEYE_A1869		THEYE_A1869	1791067	1791678	+	conserved hypothetical protein	identified by match to protein family HMM PF04367	gene	gene1857	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1869
THEYE_A1870	THEYE_A1870	glmU	glmU	1791678	1793036	+	UDP-N-acetylglucosamine pyrophosphorylase	identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR01173	gene	gene1858	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1870
THEYE_A1871	THEYE_A1871	glmS	glmS	1793036	1794865	+	glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing	identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135	gene	gene1859	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1871
THEYE_A1872	THEYE_A1872		THEYE_A1872	1794902	1797001	+	ATP-dependent DNA helicase PcrA	identified by match to protein family HMM PF00580	gene	gene1860	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1872
THEYE_A1873	THEYE_A1873	gatC	gatC	1797004	1797291	+	glutamyl-tRNA(Gln) amidotransferase%2C C subunit	identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135	gene	gene1861	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1873
THEYE_A1874	THEYE_A1874	panD	panD	1797295	1797678	+	aspartate 1-decarboxylase	identified by match to protein family HMM PF02261%3B match to protein family HMM TIGR00223	gene	gene1862	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1874
THEYE_A1875	THEYE_A1875	bioD	bioD	1797681	1798403	-	dethiobiotin synthase	identified by match to protein family HMM TIGR00347	gene	gene1863	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1875
THEYE_A1876	THEYE_A1876		THEYE_A1876	1798486	1799064	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1864	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1876
THEYE_A1877	THEYE_A1877		THEYE_A1877	1799051	1799704	+	HAD-superfamily hydrolase	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509	gene	gene1865	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1877
THEYE_A1878	THEYE_A1878		THEYE_A1878	1799699	1800070	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1866	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1878
THEYE_A1879	THEYE_A1879		THEYE_A1879	1800088	1800405	-	rubredoxin		gene	gene1867	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1879
THEYE_A1880	THEYE_A1880		THEYE_A1880	1800408	1800662	-	glutaredoxin	identified by match to protein family HMM PF00462	gene	gene1868	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1880
THEYE_A1881	THEYE_A1881		THEYE_A1881	1800655	1801002	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1869	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1881
THEYE_A1882	THEYE_A1882		THEYE_A1882	1801024	1801470	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1870	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1882
THEYE_A1883	THEYE_A1883	rpmB	rpmB	1801473	1801661	-	ribosomal protein L28	identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009	gene	gene1871	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1883
THEYE_A1884	THEYE_A1884	infB	infB	1801745	1804003	+	translation initiation factor IF-2	identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487	gene	gene1872	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1884
THEYE_A1885	THEYE_A1885	rbfA	rbfA	1804005	1804361	+	ribosome-binding factor A	identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082	gene	gene1873	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1885
THEYE_A1886	THEYE_A1886		THEYE_A1886	1804358	1805383	+	exopolyphosphatase-related protein	identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272	gene	gene1874	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1886
THEYE_A1887	THEYE_A1887		THEYE_A1887	1805384	1806154	+	sporulation initiation inhibitor protein soj	identified by match to protein family HMM PF01656	gene	gene1875	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1887
THEYE_A1888	THEYE_A1888		THEYE_A1888	1806240	1806899	+	iron-sulfur cluster-binding protein	identified by match to protein family HMM PF00037	gene	gene1876	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1888
THEYE_A1889	THEYE_A1889	uvrC	uvrC	1806883	1808652	-	excinuclease ABC%2C C subunit	identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194	gene	gene1877	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1889
THEYE_A1890	THEYE_A1890		THEYE_A1890	1808670	1810649	-	adenylate cyclase	identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226	gene	gene1878	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1890
THEYE_A1891	THEYE_A1891		THEYE_A1891	1810741	1811790	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1879	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1891
THEYE_A1892	THEYE_A1892		THEYE_A1892	1811806	1812669	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515	gene	gene1880	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1892
THEYE_A1893	THEYE_A1893		THEYE_A1893	1812659	1813549	-	mce related protein	identified by match to protein family HMM PF02470	gene	gene1881	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1893
THEYE_A1894	THEYE_A1894		THEYE_A1894	1813536	1814165	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1882	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1894
THEYE_A1895	THEYE_A1895		THEYE_A1895	1814162	1814833	-	ABC transporter permease protein	identified by match to protein family HMM PF02405	gene	gene1883	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1895
THEYE_A1896	THEYE_A1896		THEYE_A1896	1814833	1816476	-	conserved hypothetical protein	identified by match to protein family HMM PF01841	gene	gene1884	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1896
THEYE_A1897	THEYE_A1897		THEYE_A1897	1816521	1816763	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1885	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1897
THEYE_A1898	THEYE_A1898		THEYE_A1898	1816854	1817696	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1886	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1898
THEYE_A1899	THEYE_A1899		THEYE_A1899	1817705	1817983	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1887	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1899
THEYE_A1900	THEYE_A1900		THEYE_A1900	1817985	1818311	-	conserved hypothetical protein		gene	gene1888	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1900
THEYE_A1901	THEYE_A1901		THEYE_A1901	1818325	1820601	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00041%3B match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1889	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1901
THEYE_A1902	THEYE_A1902		THEYE_A1902	1820764	1821225	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1890	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1902
THEYE_A1903	THEYE_A1903		THEYE_A1903	1821244	1822122	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1891	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1903
THEYE_A1904	THEYE_A1904		THEYE_A1904	1822184	1822300	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1892	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1904
THEYE_A1905	THEYE_A1905		THEYE_A1905	1822323	1823297	-	polysaccharide deacetylase%2C putative	identified by match to protein family HMM PF00656	gene	gene1893	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1905
THEYE_A1906	THEYE_A1906		THEYE_A1906	1823313	1823912	-	lipoprotein%2C putative		gene	gene1894	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1906
THEYE_A1907	THEYE_A1907		THEYE_A1907	1823958	1824809	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1895	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1907
THEYE_A1908	THEYE_A1908		THEYE_A1908	1824875	1825201	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1896	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1908
THEYE_A1909	THEYE_A1909		THEYE_A1909	1825251	1827206	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF00595	gene	gene1897	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1909
THEYE_A1910	THEYE_A1910		THEYE_A1910	1827217	1828245	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1898	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1910
THEYE_A1911	THEYE_A1911		THEYE_A1911	1828255	1830246	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1899	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1911
THEYE_A1912	THEYE_A1912		THEYE_A1912	1830266	1830808	-	lipoprotein%2C putative		gene	gene1900	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1912
THEYE_A1913	THEYE_A1913		THEYE_A1913	1830831	1834001	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene1901	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1913
THEYE_A1914	THEYE_A1914		THEYE_A1914	1833992	1834708	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1902	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1914
THEYE_A1915	THEYE_A1915		THEYE_A1915	1834719	1835645	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1903	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1915
THEYE_A1916	THEYE_A1916		THEYE_A1916	1835659	1836867	-	tetratricopeptide repeat domain protein		gene	gene1904	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1916
THEYE_A1917	THEYE_A1917		THEYE_A1917	1836972	1837646	-	catabolite gene activator	identified by match to protein family HMM PF00027	gene	gene1905	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1917
THEYE_A1918	THEYE_A1918		THEYE_A1918	1837811	1838941	+	carbohydrate-selective porin%2C OprB family	identified by match to protein family HMM PF04966	gene	gene1906	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1918
THEYE_A1919	THEYE_A1919		THEYE_A1919	1838959	1839729	+	conserved hypothetical protein		gene	gene1907	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1919
THEYE_A1920	THEYE_A1920		THEYE_A1920	1839729	1840325	+	CbiM	identified by match to protein family HMM PF01891	gene	gene1908	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1920
THEYE_A1921	THEYE_A1921		THEYE_A1921	1840319	1841047	+	conserved hypothetical protein		gene	gene1909	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1921
THEYE_A1922	THEYE_A1922	cbiQ	cbiQ	1841037	1841780	+	cobalt ABC transporter%2C permease protein CbiQ	identified by match to protein family HMM PF02361%3B match to protein family HMM TIGR02454	gene	gene1910	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1922
THEYE_A1923	THEYE_A1923		THEYE_A1923	1841777	1842427	+	cobalt import ATP-binding protein CbiO	identified by match to protein family HMM PF00005%3B match to protein family HMM PF02463	gene	gene1911	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1923
THEYE_A1924	THEYE_A1924	ffh	ffh	1842431	1843753	-	signal recognition particle protein	identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959	gene	gene1912	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1924
THEYE_A1925	THEYE_A1925		THEYE_A1925	1843754	1844206	-	cytochrome c biogenesis protein%2C putative	identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534	gene	gene1913	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1925
THEYE_A1926	THEYE_A1926	trx	trx	1844255	1844587	-	thioredoxin	identified by match to protein family HMM PF00085%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR01068	gene	gene1914	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1926
THEYE_A1927	THEYE_A1927		THEYE_A1927	1844696	1845145	-	heat shock protein%2C Hsp20 family	identified by match to protein family HMM PF00011	gene	gene1915	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1927
THEYE_A1928	THEYE_A1928		THEYE_A1928	1845167	1847797	-	chaperone ClpB 1	identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728	gene	gene1916	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1928
THEYE_A1929	THEYE_A1929		THEYE_A1929	1847811	1848149	-	transcriptional regulator	identified by match to protein family HMM PF00376	gene	gene1917	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1929
THEYE_A1930	THEYE_A1930	dnaJ2	dnaJ2	1848152	1849219	-	chaperone protein DnaJ	identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349	gene	gene1918	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1930
THEYE_A1931	THEYE_A1931		THEYE_A1931	1849291	1850055	-	conserved hypothetical protein		gene	gene1919	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1931
THEYE_A1932	THEYE_A1932	pyrE	pyrE	1850052	1850621	-	orotate phosphoribosyltransferase	identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336	gene	gene1920	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1932
THEYE_A1933	THEYE_A1933		THEYE_A1933	1850637	1851068	-	lipoprotein%2C putative		gene	gene1921	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1933
THEYE_A1934	THEYE_A1934		THEYE_A1934	1851343	1851744	-	ggdef domain protein	identified by match to protein family HMM PF00990	gene	gene1922	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1934
THEYE_A1935	THEYE_A1935		THEYE_A1935	1851732	1851875	-	hypothetical protein	identified by glimmer%3B putative	gene	gene1923	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1935
THEYE_A1936	THEYE_A1936	pyrF	pyrF	1851907	1852605	-	orotidine 5'-phosphate decarboxylase	identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740	gene	gene1924	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1936
THEYE_A1937	THEYE_A1937	dcd	dcd	1852602	1853150	-	deoxycytidine triphosphate deaminase	identified by match to protein family HMM TIGR02274	gene	gene1925	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1937
THEYE_A1938	THEYE_A1938		THEYE_A1938	1853156	1855057	-	sensory box histidine kinase/response regulator	identified by match to protein family HMM PF00072%3B match to protein family HMM PF00512%3B match to protein family HMM PF02518%3B match to protein family HMM PF08447%3B match to protein family HMM PF08448%3B match to protein family HMM TIGR00229	gene	gene1926	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1938
THEYE_A1939	THEYE_A1939		THEYE_A1939	1855060	1855281	-	conserved domain protein	identified by match to protein family HMM PF01206	gene	gene1927	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1939
THEYE_A1940	THEYE_A1940	hypC	hypC	1855263	1855517	-	hydrogenase assembly chaperone HypC/HupF	identified by match to protein family HMM PF01455%3B match to protein family HMM TIGR00074	gene	gene1928	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1940
THEYE_A1941	THEYE_A1941		THEYE_A1941	1855490	1855990	-	hydrogenase 2 maturation protease	identified by match to protein family HMM PF01750%3B match to protein family HMM TIGR00072%3B match to protein family HMM TIGR00141	gene	gene1929	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1941
THEYE_A1942	THEYE_A1942		THEYE_A1942	1856042	1857712	-	hydrogenase-2 large chain	identified by match to protein family HMM PF00374	gene	gene1930	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1942
THEYE_A1943	THEYE_A1943		THEYE_A1943	1857728	1858756	-	uptake hydrogenase small subunit	identified by match to protein family HMM PF01058%3B match to protein family HMM PF08425%3B match to protein family HMM TIGR00391%3B match to protein family HMM TIGR01409	gene	gene1931	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1943
THEYE_A1944	THEYE_A1944		THEYE_A1944	1858938	1859354	-	lipoprotein%2C putative		gene	gene1932	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1944
THEYE_A1945	THEYE_A1945		THEYE_A1945	1859550	1860893	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1933	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1945
THEYE_A1946	THEYE_A1946		THEYE_A1946	1860898	1861194	+	nucleotidyltransferase	identified by match to protein family HMM PF01909	gene	gene1934	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1946
THEYE_A1947	THEYE_A1947		THEYE_A1947	1861187	1861534	+	nucleotidyltransferase	identified by match to protein family HMM PF01934	gene	gene1935	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1947
THEYE_A1948	THEYE_A1948		THEYE_A1948	1861545	1862780	+	6-phosphofructokinase%2C pyrophosphate-dependent	identified by match to protein family HMM PF00365	gene	gene1936	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1948
THEYE_A1949	THEYE_A1949		THEYE_A1949	1862767	1863225	+	conserved hypothetical protein		gene	gene1937	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1949
THEYE_A1950	THEYE_A1950		THEYE_A1950	1863213	1863551	+	conserved hypothetical protein	identified by match to protein family HMM PF02021	gene	gene1938	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1950
THEYE_A1951	THEYE_A1951		THEYE_A1951	1863553	1864662	-	putative permease%2C YjgP/YjgQ family	identified by match to protein family HMM PF03739	gene	gene1939	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1951
THEYE_A1952	THEYE_A1952		THEYE_A1952	1864667	1865722	-	putative permease%2C YjgP/YjgQ family	identified by match to protein family HMM PF03739	gene	gene1940	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1952
THEYE_A1953	THEYE_A1953		THEYE_A1953	1865722	1866690	-	arabinose 5-phosphate isomerase	identified by match to protein family HMM PF00571%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR00393	gene	gene1941	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1953
THEYE_A1954	THEYE_A1954		THEYE_A1954	1866735	1867331	-	conserved hypothetical protein		gene	gene1942	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1954
THEYE_A1955	THEYE_A1955	hisA	hisA	1867353	1868087	+	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00007	gene	gene1943	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1955
THEYE_A1956	THEYE_A1956		THEYE_A1956	1868353	1869060	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1944	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1956
THEYE_A1957	THEYE_A1957		THEYE_A1957	1869057	1869170	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1945	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1957
THEYE_A1958	THEYE_A1958	hisF	hisF	1869174	1870010	+	imidazoleglycerol phosphate synthase%2C cyclase subunit	identified by match to protein family HMM PF00977%3B match to protein family HMM TIGR00735	gene	gene1946	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1958
THEYE_A1959	THEYE_A1959		THEYE_A1959	1870164	1871918	+	carbon starvation-induced protein	identified by match to protein family HMM PF02554	gene	gene1948	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1959
THEYE_A1960	THEYE_A1960		THEYE_A1960	1870055	1870201	-	conserved hypothetical protein		gene	gene1947	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1960
THEYE_A1961	THEYE_A1961		THEYE_A1961	1871915	1873099	+	FAD-dependent oxidoreductase	identified by match to protein family HMM PF01266	gene	gene1949	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1961
THEYE_A1962	THEYE_A1962		THEYE_A1962	1873096	1874649	+	Uma3		gene	gene1950	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1962
THEYE_A1963	THEYE_A1963		THEYE_A1963	1874704	1874916	+	conserved domain protein	identified by match to protein family HMM PF03681	gene	gene1951	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1963
THEYE_A1964	THEYE_A1964		THEYE_A1964	1875118	1876032	-	Mrr restriction system protein	identified by match to protein family HMM PF04471	gene	gene1952	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1964
THEYE_A1965	THEYE_A1965		THEYE_A1965	1876247	1876513	-	probable endonuclease IV%2C putative		gene	gene1953	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1965
THEYE_A1966	THEYE_A1966		THEYE_A1966	1876838	1877104	+	SpoVT / AbrB like domain protein	identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439	gene	gene1954	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1966
THEYE_A1967	THEYE_A1967		THEYE_A1967	1877101	1877514	+	PIN domain%2C putative	identified by match to protein family HMM PF01850	gene	gene1955	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1967
THEYE_A1968	THEYE_A1968		THEYE_A1968	1877515	1878537	-	P-aminobenzoate synthetase	identified by match to protein family HMM PF00425	gene	gene1956	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1968
THEYE_A1969	THEYE_A1969		THEYE_A1969	1878538	1879278	-	aminodeoxychorismate lyase	identified by match to protein family HMM PF01063	gene	gene1957	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1969
THEYE_A1970	THEYE_A1970		THEYE_A1970	1879407	1880432	-	putative integral membrane protein	identified by match to protein family HMM PF00924	gene	gene1958	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1970
THEYE_A1971	THEYE_A1971		THEYE_A1971	1880442	1881518	-	ketoisovalerate oxidoreductase subunit VorB	identified by match to protein family HMM PF01855%3B match to protein family HMM PF02780	gene	gene1959	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1971
THEYE_A1972	THEYE_A1972		THEYE_A1972	1881634	1882329	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1960	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1972
THEYE_A1973	THEYE_A1973		THEYE_A1973	1882298	1883116	-	putative protein		gene	gene1961	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1973
THEYE_A1974	THEYE_A1974		THEYE_A1974	1883133	1884944	+	iron-sulfur cluster binding protein	identified by match to protein family HMM PF00111	gene	gene1962	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1974
THEYE_A1975	THEYE_A1975	cysS	cysS	1884976	1886439	+	cysteinyl-tRNA synthetase	identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435	gene	gene1963	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1975
THEYE_A1976	THEYE_A1976		THEYE_A1976	1886418	1887164	+	RNA methyltransferase%2C TrmH family%2C group 3	identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186	gene	gene1964	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1976
THEYE_A1977	THEYE_A1977		THEYE_A1977	1887180	1889552	+	copper-translocating P-type ATPase	identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525	gene	gene1965	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1977
THEYE_A1978	THEYE_A1978		THEYE_A1978	1889589	1891592	+	conserved hypothetical protein		gene	gene1966	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1978
THEYE_A1979	THEYE_A1979		THEYE_A1979	1891912	1892685	+	undecaprenol kinase%2C putative	identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753	gene	gene1967	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1979
THEYE_A1980	THEYE_A1980		THEYE_A1980	1892685	1894805	+	DNA translocase cell division protein FtsK	identified by match to protein family HMM PF01580	gene	gene1968	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1980
THEYE_A1981	THEYE_A1981	rrf	rrf	1894845	1894961	+	5S ribosomal RNA		rRNA	gene1969	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1981
THEYE_A1982	THEYE_A1982		THEYE_A1982	1895139	1895342	+	conserved domain protein	identified by match to protein family HMM PF00313	gene	gene1970	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1982
THEYE_A1983	THEYE_A1983	lipA	lipA	1895386	1896246	+	lipoic acid synthetase	identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00510	gene	gene1971	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1983
THEYE_A1984	THEYE_A1984		THEYE_A1984	1896233	1897384	+	NADH-dependent butanol dehydrogenase a	identified by match to protein family HMM PF00465	gene	gene1972	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1984
THEYE_A1985	THEYE_A1985		THEYE_A1985	1897405	1898613	+	hypothetical aminotransferase YfdZ	identified by match to protein family HMM PF00155	gene	gene1973	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1985
THEYE_A1986	THEYE_A1986		THEYE_A1986	1898623	1899903	+	homoserine dehydrogenase (HDH): ThrA%2C metL	identified by match to protein family HMM PF00742%3B match to protein family HMM PF01408%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447	gene	gene1974	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1986
THEYE_A1987	THEYE_A1987		THEYE_A1987	1899884	1900621	+	molybdopterin biosynthesis protein MoeB	identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237	gene	gene1975	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1987
THEYE_A1988	THEYE_A1988		THEYE_A1988	1900597	1901004	+	conserved hypothetical protein		gene	gene1976	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1988
THEYE_A1989	THEYE_A1989		THEYE_A1989	1901007	1902788	+	penicillin-binding protein 1	identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074	gene	gene1977	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1989
THEYE_A1990	THEYE_A1990		THEYE_A1990	1902792	1903562	+	sporulation initiation inhibitor protein soj	identified by match to protein family HMM PF01656	gene	gene1978	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1990
THEYE_A1991	THEYE_A1991		THEYE_A1991	1903543	1904397	+	stage 0 sporulation protein J	identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180	gene	gene1979	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1991
THEYE_A1992	THEYE_A1992		THEYE_A1992	1904372	1905730	-	D-lactate dehydrogenase	identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913	gene	gene1980	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1992
THEYE_A1993	THEYE_A1993		THEYE_A1993	1905727	1909173	-	chromosome segregation SMC protein%2C putative		gene	gene1981	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1993
THEYE_A1994	THEYE_A1994	dsrA	dsrA	1909322	1910530	+	sulfite reductase%2C dissimilatory-type alpha subunit	identified by match to protein family HMM PF01077%3B match to protein family HMM TIGR02064	gene	gene1982	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1994
THEYE_A1995	THEYE_A1995	dsrB	dsrB	1910565	1911665	+	sulfite reductase%2C dissimilatory-type beta subunit	identified by match to protein family HMM PF00037%3B match to protein family HMM PF01077%3B match to protein family HMM PF03460%3B match to protein family HMM TIGR02066	gene	gene1983	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1995
THEYE_A1996	THEYE_A1996		THEYE_A1996	1911723	1911947	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1984	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1996
THEYE_A1997	THEYE_A1997		THEYE_A1997	1912024	1912494	+	competence/damage-inducible protein CinA C-terminal domain	identified by match to protein family HMM PF02464%3B match to protein family HMM TIGR00199	gene	gene1985	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1997
THEYE_A1998	THEYE_A1998		THEYE_A1998	1912510	1912779	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1986	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1998
THEYE_A1999	THEYE_A1999		THEYE_A1999	1912779	1913108	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1987	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A1999
THEYE_A2000	THEYE_A2000	ligA	ligA	1913129	1915141	+	DNA ligase%2C NAD-dependent	identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575	gene	gene1988	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2000
THEYE_A2001	THEYE_A2001		THEYE_A2001	1915144	1915584	+	conserved protein	identified by match to protein family HMM PF02590	gene	gene1989	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2001
THEYE_A2002	THEYE_A2002		THEYE_A2002	1915578	1915754	-	conserved domain protein	identified by match to protein family HMM PF03966%3B match to protein family HMM PF08792	gene	gene1990	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2002
THEYE_A2003	THEYE_A2003	gltX	gltX	1915744	1917141	-	glutamyl-tRNA synthetase	identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464	gene	gene1991	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2003
THEYE_A2004	THEYE_A2004	pilB2	pilB2	1917453	1919171	+	type IV-A pilus assembly ATPase PilB	identified by match to protein family HMM PF00437%3B match to protein family HMM PF05157%3B match to protein family HMM TIGR02538	gene	gene1992	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2004
THEYE_A2005	THEYE_A2005		THEYE_A2005	1919171	1920247	+	HD domain protein	identified by match to protein family HMM PF01590%3B match to protein family HMM PF01966	gene	gene1993	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2005
THEYE_A2006	THEYE_A2006		THEYE_A2006	1920247	1921332	+	hamp domain/gaf domain/hd domain protein	identified by match to protein family HMM PF01590%3B match to protein family HMM PF01966	gene	gene1994	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2006
THEYE_A2007	THEYE_A2007		THEYE_A2007	1921329	1922093	+	cAMP phosphodiesterases class-II:metallo-beta-lactamase superfamily	identified by match to protein family HMM PF00753	gene	gene1995	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2007
THEYE_A2008	THEYE_A2008		THEYE_A2008	1922093	1924003	+	adenylate cyclase	identified by match to protein family HMM PF00211%3B match to protein family HMM PF05226	gene	gene1996	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2008
THEYE_A2009	THEYE_A2009		THEYE_A2009	1924072	1924147	+	tRNA-Val		tRNA	gene1997	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2009
THEYE_A2010	THEYE_A2010		THEYE_A2010	1924153	1924232	+	tRNA-Asp		tRNA	gene1998	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2010
THEYE_A2011	THEYE_A2011		THEYE_A2011	1925188	1925430	+	hypothetical protein	identified by glimmer%3B putative	gene	gene1999	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2011
THEYE_A2012	THEYE_A2012		THEYE_A2012	1925561	1926259	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2000	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2012
THEYE_A2013	THEYE_A2013		THEYE_A2013	1926408	1926839	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2001	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2013
THEYE_A2014	THEYE_A2014		THEYE_A2014	1926861	1929077	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2002	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2014
THEYE_A2015	THEYE_A2015		THEYE_A2015	1929249	1929482	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2003	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2015
THEYE_A2016	THEYE_A2016		THEYE_A2016	1930268	1930381	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2004	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2016
THEYE_A2017	THEYE_A2017		THEYE_A2017	1930631	1930783	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2005	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2017
THEYE_A2018	THEYE_A2018		THEYE_A2018	1931088	1931375	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2006	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2018
THEYE_A2019	THEYE_A2019		THEYE_A2019	1931393	1931512	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2007	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2019
THEYE_A2020	THEYE_A2020		THEYE_A2020	1931506	1931631	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2008	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2020
THEYE_A2021	THEYE_A2021		THEYE_A2021	1931794	1931958	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2009	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2021
THEYE_A2022	THEYE_A2022		THEYE_A2022	1932163	1932354	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2010	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2022
THEYE_A2023	THEYE_A2023		THEYE_A2023	1932539	1932694	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2011	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2023
THEYE_A2024	THEYE_A2024		THEYE_A2024	1932739	1932879	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2012	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2024
THEYE_A2025	THEYE_A2025		THEYE_A2025	1932931	1933074	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2013	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2025
THEYE_A2026	THEYE_A2026		THEYE_A2026	1933457	1933705	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2014	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2026
THEYE_A2027	THEYE_A2027		THEYE_A2027	1934149	1934283	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2015	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2027
THEYE_A2028	THEYE_A2028		THEYE_A2028	1934322	1934615	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2016	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2028
THEYE_A2029	THEYE_A2029		THEYE_A2029	1934979	1935251	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2017	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2029
THEYE_A2030	THEYE_A2030		THEYE_A2030	1935262	1935396	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2018	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2030
THEYE_A2031	THEYE_A2031		THEYE_A2031	1935833	1936006	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2019	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2031
THEYE_A2032	THEYE_A2032		THEYE_A2032	1935977	1936183	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2020	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2032
THEYE_A2033	THEYE_A2033		THEYE_A2033	1936225	1936692	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2021	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2033
THEYE_A2034	THEYE_A2034	cas2_3	cas2_3	1937715	1937981	-	CRISPR-associated protein Cas2	identified by match to protein family HMM PF02647%3B match to protein family HMM TIGR01573	gene	gene2022	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2034
THEYE_A2035	THEYE_A2035		THEYE_A2035	1937999	1938139	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2023	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2035
THEYE_A2036	THEYE_A2036	cas1_2	cas1_2	1938114	1939091	-	CRISPR-associated protein Cas1%2C HMARI/TNEAP subtype	identified by match to protein family HMM PF01867%3B match to protein family HMM TIGR00287%3B match to protein family HMM TIGR03641	gene	gene2024	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2036
THEYE_A2037	THEYE_A2037	cas4_2	cas4_2	1939095	1939616	-	CRISPR-associated protein Cas4	identified by match to protein family HMM PF01930%3B match to protein family HMM TIGR00372	gene	gene2025	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2037
THEYE_A2038	THEYE_A2038		THEYE_A2038	1939623	1940834	-	ATPase		gene	gene2026	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2038
THEYE_A2039	THEYE_A2039	cas3_2	cas3_2	1940909	1943095	-	CRISPR-associated helicase Cas3	identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM TIGR01587%3B match to protein family HMM TIGR01596	gene	gene2027	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2039
THEYE_A2040	THEYE_A2040	cas5_2	cas5_2	1943098	1943817	-	CRISPR-associated protein Cas5	identified by match to protein family HMM TIGR02593	gene	gene2028	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2040
THEYE_A2041	THEYE_A2041	cst2	cst2	1943814	1944713	-	CRISPR-associated regulatory protein%2C DevR family	identified by match to protein family HMM TIGR01875%3B match to protein family HMM TIGR02585	gene	gene2029	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2041
THEYE_A2042	THEYE_A2042	cst1	cst1	1944716	1946380	-	CRISPR-associated CXXC_CXXC protein Cst1	identified by match to protein family HMM TIGR01908	gene	gene2030	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2042
THEYE_A2043	THEYE_A2043	cas6_4	cas6_4	1946537	1947325	-	CRISPR-associated protein Cas6	identified by match to protein family HMM PF01881%3B match to protein family HMM TIGR01877	gene	gene2031	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2043
THEYE_A2044	THEYE_A2044		THEYE_A2044	1947480	1948820	+	Trk system potassium uptake protein TrkA (K(+)-uptake protein trkA)	identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254	gene	gene2032	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2044
THEYE_A2045	THEYE_A2045		THEYE_A2045	1948817	1950262	+	Trk system potassium uptake protein TrkH	identified by match to protein family HMM PF02386%3B match to protein family HMM TIGR00933	gene	gene2033	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2045
THEYE_A2046	THEYE_A2046		THEYE_A2046	1950237	1951079	-	periplasmic serine protease	identified by match to protein family HMM PF00574%3B match to protein family HMM PF01972	gene	gene2034	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2046
THEYE_A2047	THEYE_A2047		THEYE_A2047	1951101	1953245	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2035	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2047
THEYE_A2048	THEYE_A2048		THEYE_A2048	1953242	1953631	-	conserved hypothetical protein		gene	gene2036	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2048
THEYE_A2049	THEYE_A2049		THEYE_A2049	1953615	1953956	-	nucleotidyltransferase domain protein	identified by match to protein family HMM PF01909	gene	gene2037	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2049
THEYE_A2050	THEYE_A2050		THEYE_A2050	1953975	1954385	-	conserved hypothetical protein	identified by match to protein family HMM PF02623	gene	gene2038	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2050
THEYE_A2051	THEYE_A2051	csrA	csrA	1954372	1954656	-	carbon storage regulator	identified by match to protein family HMM PF02599%3B match to protein family HMM TIGR00202	gene	gene2039	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2051
THEYE_A2052	THEYE_A2052		THEYE_A2052	1954919	1955086	+	hypothetical protein	identified by glimmer%3B putative	gene	gene2040	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2052
THEYE_A2053	THEYE_A2053	flgL	flgL	1955099	1956526	-	flagellar hook-associated protein 3	identified by match to protein family HMM PF07196%3B match to protein family HMM TIGR02550	gene	gene2041	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2053
THEYE_A2054	THEYE_A2054	flgK	flgK	1956568	1958232	-	flagellar hook-associated protein FlgK	identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02492	gene	gene2042	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2054
THEYE_A2055	THEYE_A2055		THEYE_A2055	1958233	1958673	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2043	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2055
THEYE_A2056	THEYE_A2056		THEYE_A2056	1958657	1958956	-	negative regulator of flagellin synthesis	identified by match to protein family HMM PF04316	gene	gene2044	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2056
THEYE_A2057	THEYE_A2057		THEYE_A2057	1958983	1959711	-	peptidase%2C family M23/M37 domain protein	identified by match to protein family HMM PF01551	gene	gene2045	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2057
THEYE_A2058	THEYE_A2058	flgI	flgI	1959719	1960930	-	flagellar P-ring protein FlgI	identified by match to protein family HMM PF02119	gene	gene2046	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2058
THEYE_A2059	THEYE_A2059	flgH	flgH	1960943	1961659	-	flagellar L-ring protein FlgH	identified by match to protein family HMM PF02107	gene	gene2047	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2059
THEYE_A2060	THEYE_A2060		THEYE_A2060	1961656	1962351	-	flagella basal body P-ring formation protein FlgA	identified by match to protein family HMM PF08666%3B match to protein family HMM TIGR03170	gene	gene2048	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2060
THEYE_A2061	THEYE_A2061	flgG	flgG	1962374	1963162	-	flagellar basal-body rod protein FlgG	identified by match to protein family HMM PF00460%3B match to protein family HMM PF06429%3B match to protein family HMM TIGR02488	gene	gene2049	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2061
THEYE_A2062	THEYE_A2062		THEYE_A2062	1963175	1963894	-	flagellar hook basal-body protein FlgG	identified by match to protein family HMM PF00460	gene	gene2050	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2062
THEYE_A2063	THEYE_A2063		THEYE_A2063	1964018	1964203	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2051	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2063
THEYE_A2064	THEYE_A2064		THEYE_A2064	1964204	1965043	-	HD domain protein%2C putative	identified by match to protein family HMM PF01966%3B match to protein family HMM PF08668%3B match to protein family HMM TIGR00277	gene	gene2052	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2064
THEYE_A2065	THEYE_A2065		THEYE_A2065	1965053	1966108	-	chemotaxis response regulator protein-glutamate methylesterase	identified by match to protein family HMM PF00072%3B match to protein family HMM PF01339	gene	gene2053	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2065
THEYE_A2066	THEYE_A2066		THEYE_A2066	1966118	1967302	-	chemotaxis protein CheZ	identified by match to protein family HMM PF01584%3B match to protein family HMM PF04344	gene	gene2054	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2066
THEYE_A2067	THEYE_A2067		THEYE_A2067	1967321	1969018	-	CheA	identified by match to protein family HMM PF01584%3B match to protein family HMM PF01627%3B match to protein family HMM PF02518%3B match to protein family HMM PF02895	gene	gene2055	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2067
THEYE_A2068	THEYE_A2068		THEYE_A2068	1969018	1969422	-	chemotaxis protein CheY	identified by match to protein family HMM PF00072	gene	gene2056	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2068
THEYE_A2069	THEYE_A2069		THEYE_A2069	1969432	1969806	-	putative Chemotaxis protein CheY	identified by match to protein family HMM PF00072	gene	gene2057	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2069
THEYE_A2070	THEYE_A2070		THEYE_A2070	1969820	1970671	-	chemotaxis protein methyltransferase 2	identified by match to protein family HMM PF01739%3B match to protein family HMM PF03705	gene	gene2058	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2070
THEYE_A2071	THEYE_A2071		THEYE_A2071	1970668	1972551	-	conserved hypothetical protein	identified by match to protein family HMM PF02985%3B match to protein family HMM PF03130	gene	gene2059	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2071
THEYE_A2072	THEYE_A2072		THEYE_A2072	1972599	1973309	-	RNA polymerase sigma factor for flagellar operon	identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02479%3B match to protein family HMM TIGR02937	gene	gene2060	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2072
THEYE_A2073	THEYE_A2073		THEYE_A2073	1973314	1974132	-	flagellar biosynthesis protein FlhG	identified by match to protein family HMM PF01656	gene	gene2061	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2073
THEYE_A2074	THEYE_A2074		THEYE_A2074	1974122	1975165	-	flagellar GTP-binding protein%2C putative	identified by match to protein family HMM PF00448%3B match to protein family HMM TIGR03499	gene	gene2062	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2074
THEYE_A2075	THEYE_A2075	flhA	flhA	1975176	1977227	-	flagellar biosynthesis protein FlhA	identified by match to protein family HMM PF00771%3B match to protein family HMM TIGR01398	gene	gene2063	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2075
THEYE_A2076	THEYE_A2076	flhB	flhB	1977224	1978285	-	flagellar biosynthetic protein FlhB	identified by match to protein family HMM PF01312%3B match to protein family HMM TIGR00328	gene	gene2064	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2076
THEYE_A2077	THEYE_A2077		THEYE_A2077	1978289	1979020	-	putative flagellar biosynthetic protein-like protein	identified by match to protein family HMM PF01311	gene	gene2065	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2077
THEYE_A2078	THEYE_A2078	fliQ	fliQ	1979017	1979286	-	flagellar biosynthetic protein FliQ	identified by match to protein family HMM PF01313%3B match to protein family HMM TIGR01402	gene	gene2066	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2078
THEYE_A2079	THEYE_A2079		THEYE_A2079	1979283	1980290	-	flagellar biosynthetic protein FliP	identified by match to protein family HMM PF00813%3B match to protein family HMM TIGR01103%3B match to protein family HMM TIGR03500	gene	gene2067	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2079
THEYE_A2080	THEYE_A2080		THEYE_A2080	1980300	1980719	-	flagellar motor switch protein FliN	identified by match to protein family HMM PF01052%3B match to protein family HMM TIGR02480	gene	gene2068	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2080
THEYE_A2081	THEYE_A2081	fliM	fliM	1980721	1981689	-	flagellar motor switch protein FliM	identified by match to protein family HMM PF01052%3B match to protein family HMM PF02154%3B match to protein family HMM TIGR01397	gene	gene2069	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2081
THEYE_A2082	THEYE_A2082	fliL	fliL	1981692	1982204	-	flagellar basal body-associated protein FliL	identified by match to protein family HMM PF03748	gene	gene2070	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2082
THEYE_A2083	THEYE_A2083		THEYE_A2083	1982512	1984146	-	DNA mismatch repair protein MutL	identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585	gene	gene2071	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2083
THEYE_A2084	THEYE_A2084		THEYE_A2084	1984153	1984704	-	outer membrane lipoprotein Slp family	identified by match to protein family HMM PF03843	gene	gene2072	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2084
THEYE_A2085	THEYE_A2085		THEYE_A2085	1984750	1985145	-	two-component hybrid sensor and regulator%2C putative		gene	gene2073	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2085
THEYE_A2086	THEYE_A2086		THEYE_A2086	1985157	1986320	-	twitching motility protein PilT	identified by match to protein family HMM PF00437%3B match to protein family HMM TIGR01420	gene	gene2074	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2086
THEYE_A2087	THEYE_A2087		THEYE_A2087	1986317	1987396	-	twitching mobility protein	identified by match to protein family HMM PF00437%3B match to protein family HMM TIGR01420	gene	gene2075	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2087
THEYE_A2088	THEYE_A2088		THEYE_A2088	1987458	1988102	+	phosphoglycolate phosphatase	identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01509%3B match to protein family HMM TIGR01549	gene	gene2076	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2088
THEYE_A2089	THEYE_A2089		THEYE_A2089	1988104	1988847	+	carbon monoxide dehydrogenase nickel-insertion accessory protein	identified by match to protein family HMM PF01656	gene	gene2077	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2089
THEYE_A2090	THEYE_A2090		THEYE_A2090	1988840	1989610	+	conserved protein	identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444	gene	gene2078	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2090
THEYE_A2091	THEYE_A2091		THEYE_A2091	1989655	1993329	-	hypothetical protein	identified by glimmer%3B putative	gene	gene2079	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2091
THEYE_A2092	THEYE_A2092		THEYE_A2092	1993341	1994867	-	tetratricopeptide repeat domain protein	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719	gene	gene2080	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2092
THEYE_A2093	THEYE_A2093		THEYE_A2093	1995045	1995914	+	lipid A lauroyl acyltransferase%2C putative	identified by match to protein family HMM PF03279	gene	gene2081	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2093
THEYE_A2094	THEYE_A2094		THEYE_A2094	1995892	1997661	-	ABC transporter%2C ATP-binding protein%2C MsbA family	identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664	gene	gene2082	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2094
THEYE_A2095	THEYE_A2095		THEYE_A2095	1997652	1998404	-	lipopolysaccharide biosynthesis glycosyltransferase	identified by match to protein family HMM PF00535	gene	gene2083	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2095
THEYE_A2096	THEYE_A2096	moaA	moaA	1998410	1999378	-	molybdenum cofactor biosynthesis protein A	identified by match to protein family HMM PF04055%3B match to protein family HMM PF06463%3B match to protein family HMM TIGR02666	gene	gene2084	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2096
THEYE_A2097	THEYE_A2097		THEYE_A2097	1999375	2000238	-	TPR domain protein%2C putative	identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719%3B match to protein family HMM TIGR02795	gene	gene2085	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2097
THEYE_A2098	THEYE_A2098		THEYE_A2098	2000235	2000783	-	peptidoglycan-associated lipoprotein	identified by match to protein family HMM PF00691%3B match to protein family HMM TIGR02802	gene	gene2086	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2098
THEYE_A2099	THEYE_A2099	glyS	glyS	2000889	2002928	-	glycyl-tRNA synthetase%2C beta subunit	identified by match to protein family HMM PF02092%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00211	gene	gene2087	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2099
THEYE_A2100	THEYE_A2100	glyQ	glyQ	2002921	2003778	-	glycyl-tRNA synthetase%2C alpha subunit	identified by match to protein family HMM PF02091%3B match to protein family HMM TIGR00388	gene	gene2088	http://www.ncbi.nlm.nih.gov/gene/?term=THEYE_A2100