locus-tag class description MA03_00025 PF03104 DNA polymerase family B, exonuclease domain MA03_00025 PF00136 DNA polymerase family B MA03_00050 PF00118 TCP-1/cpn60 chaperonin family MA03_00085 PF03129 Anticodon binding domain MA03_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MA03_00095 PF10385 RNA polymerase beta subunit external 1 domain MA03_00095 PF04565 RNA polymerase Rpb2, domain 3 MA03_00095 PF04561 RNA polymerase Rpb2, domain 2 MA03_00095 PF04563 RNA polymerase beta subunit MA03_00095 PF04560 RNA polymerase Rpb2, domain 7 MA03_00095 PF00562 RNA polymerase Rpb2, domain 6 MA03_00100 PF04997 RNA polymerase Rpb1, domain 1 MA03_00100 PF00623 RNA polymerase Rpb1, domain 2 MA03_00100 PF04983 RNA polymerase Rpb1, domain 3 MA03_00100 PF05000 RNA polymerase Rpb1, domain 4 MA03_00100 PF04998 RNA polymerase Rpb1, domain 5 MA03_00130 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MA03_00135 PF00572 Ribosomal protein L13 MA03_00140 PF00380 Ribosomal protein S9/S16 MA03_00155 PF00318 Ribosomal protein S2 MA03_00160 PF01875 Memo-like protein MA03_00165 PF01070 FMN-dependent dehydrogenase MA03_00180 PF01139 tRNA-splicing ligase RtcB MA03_00185 PF00177 Ribosomal protein S7p/S5e MA03_00190 PF05496 Holliday junction DNA helicase RuvB P-loop domain MA03_00190 PF05491 RuvB C-terminal winged helix domain MA03_00190 PF17864 RuvB AAA lid domain MA03_00195 PF05496 Holliday junction DNA helicase RuvB P-loop domain MA03_00195 PF12002 MgsA AAA+ ATPase C terminal MA03_00195 PF01661 Macro domain MA03_00195 PF16193 AAA C-terminal domain MA03_00210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MA03_00210 PF13378 Enolase C-terminal domain-like MA03_00225 PF00416 Ribosomal protein S13/S18 MA03_00235 PF00411 Ribosomal protein S11 MA03_00300 PF01008 Initiation factor 2 subunit family MA03_00310 PF00467 KOW motif MA03_00310 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MA03_00320 PF00281 Ribosomal protein L5 MA03_00320 PF00673 ribosomal L5P family C-terminus MA03_00325 PF00410 Ribosomal protein S8 MA03_00345 PF03719 Ribosomal protein S5, C-terminal domain MA03_00345 PF00333 Ribosomal protein S5, N-terminal domain MA03_00375 PF00297 Ribosomal protein L3 MA03_00385 PF00276 Ribosomal protein L23 MA03_00390 PF03947 Ribosomal Proteins L2, C-terminal domain MA03_00390 PF00181 Ribosomal Proteins L2, RNA binding domain MA03_00395 PF07992 Pyridine nucleotide-disulphide oxidoreductase MA03_00405 PF00298 Ribosomal protein L11, RNA binding domain MA03_00405 PF03946 Ribosomal protein L11, N-terminal domain MA03_00410 PF00687 Ribosomal protein L1p/L10e family MA03_00415 PF00466 Ribosomal protein L10 MA03_00420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MA03_00420 PF01411 tRNA synthetases class II (A) MA03_00420 PF02272 DHHA1 domain MA03_00430 PF01066 CDP-alcohol phosphatidyltransferase MA03_00435 PF01137 RNA 3'-terminal phosphate cyclase MA03_00435 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain MA03_00460 PF00005 ABC transporter MA03_00475 PF05161 MOFRL family MA03_00475 PF13660 Domain of unknown function (DUF4147) MA03_00505 PF00459 Inositol monophosphatase family MA03_00535 PF17863 AAA lid domain MA03_00535 PF07726 ATPase family associated with various cellular activities (AAA) MA03_00550 PF05191 Adenylate kinase, active site lid MA03_00575 PF00696 Amino acid kinase family MA03_00585 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 MA03_00585 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain MA03_00600 PF12804 MobA-like NTP transferase domain MA03_00610 PF12002 MgsA AAA+ ATPase C terminal MA03_00610 PF01661 Macro domain MA03_00610 PF05496 Holliday junction DNA helicase RuvB P-loop domain MA03_00610 PF16193 AAA C-terminal domain MA03_00620 PF01950 Fructose-1,6-bisphosphatase MA03_00625 PF00690 Cation transporter/ATPase, N-terminus MA03_00625 PF00689 Cation transporting ATPase, C-terminus MA03_00630 PF02374 Anion-transporting ATPase MA03_00640 PF01037 Lrp/AsnC ligand binding domain MA03_00665 PF01039 Carboxyl transferase domain MA03_00675 PF00534 Glycosyl transferases group 1 MA03_00675 PF00535 Glycosyl transferase family 2 MA03_00695 PF00528 Binding-protein-dependent transport system inner membrane component MA03_00705 PF00005 ABC transporter MA03_00705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MA03_00710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MA03_00710 PF00005 ABC transporter MA03_00725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MA03_00730 PF00528 Binding-protein-dependent transport system inner membrane component MA03_00740 PF00005 ABC transporter MA03_00740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MA03_00745 PF00005 ABC transporter MA03_00745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MA03_00775 PF00719 Inorganic pyrophosphatase MA03_00780 PF03144 Elongation factor Tu domain 2 MA03_00780 PF00009 Elongation factor Tu GTP binding domain MA03_00780 PF03143 Elongation factor Tu C-terminal domain MA03_00790 PF00692 dUTPase MA03_00795 PF10576 Iron-sulfur binding domain of endonuclease III MA03_00795 PF00633 Helix-hairpin-helix motif MA03_00795 PF00730 HhH-GPD superfamily base excision DNA repair protein MA03_00805 PF07992 Pyridine nucleotide-disulphide oxidoreductase MA03_00805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MA03_00815 PF08264 Anticodon-binding domain of tRNA MA03_00815 PF00133 tRNA synthetases class I (I, L, M and V) MA03_00825 PF00902 Sec-independent protein translocase protein (TatC) MA03_00845 PF01048 Phosphorylase superfamily MA03_00855 PF08753 NikR C terminal nickel binding domain MA03_00855 PF01402 Ribbon-helix-helix protein, copG family MA03_00865 PF00005 ABC transporter MA03_00875 PF17284 Spermidine synthase tetramerisation domain MA03_00880 PF00289 Biotin carboxylase, N-terminal domain MA03_00880 PF02785 Biotin carboxylase C-terminal domain MA03_00880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MA03_00885 PF01026 TatD related DNase MA03_00890 PF00348 Polyprenyl synthetase MA03_00905 PF01494 FAD binding domain MA03_00910 PF00483 Nucleotidyl transferase MA03_00915 PF00113 Enolase, C-terminal TIM barrel domain MA03_00915 PF03952 Enolase, N-terminal domain MA03_00925 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family MA03_00945 PF02577 Bifunctional nuclease MA03_00950 PF00589 Phage integrase family MA03_00950 PF02899 Phage integrase, N-terminal SAM-like domain MA03_00955 PF00857 Isochorismatase family MA03_00965 PF01588 Putative tRNA binding domain MA03_00965 PF09334 tRNA synthetases class I (M) MA03_00965 PF08264 Anticodon-binding domain of tRNA MA03_01005 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 MA03_01005 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain MA03_01040 PF02464 Competence-damaged protein MA03_01040 PF18146 Damage-inducible protein CinA KH domain MA03_01040 PF00994 Probable molybdopterin binding domain MA03_01045 PF00535 Glycosyl transferase family 2 MA03_01045 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MA03_01055 PF01380 SIS domain MA03_01120 PF04055 Radical SAM superfamily MA03_01120 PF02310 B12 binding domain MA03_01140 PF00005 ABC transporter MA03_01165 PF01048 Phosphorylase superfamily MA03_01175 PF01048 Phosphorylase superfamily MA03_01180 PF01979 Amidohydrolase family MA03_01205 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MA03_01205 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MA03_01215 PF00248 Aldo/keto reductase family MA03_01225 PF13520 Amino acid permease MA03_01255 PF01523 Putative modulator of DNA gyrase MA03_01260 PF01523 Putative modulator of DNA gyrase MA03_01275 PF13192 Thioredoxin domain MA03_01275 PF07992 Pyridine nucleotide-disulphide oxidoreductase MA03_01330 PF00155 Aminotransferase class I and II MA03_01340 PF07155 ECF-type riboflavin transporter, S component MA03_01350 PF00920 Dehydratase family MA03_01370 PF05014 Nucleoside 2-deoxyribosyltransferase MA03_01380 PF00005 ABC transporter MA03_01400 PF05191 Adenylate kinase, active site lid MA03_01410 PF00083 Sugar (and other) transporter MA03_01410 PF07690 Major Facilitator Superfamily MA03_01425 PF05343 M42 glutamyl aminopeptidase MA03_01435 PF14748 Pyrroline-5-carboxylate reductase dimerisation MA03_01435 PF03807 NADP oxidoreductase coenzyme F420-dependent MA03_01440 PF01569 PAP2 superfamily MA03_01475 PF01880 Desulfoferrodoxin MA03_01480 PF00483 Nucleotidyl transferase MA03_01505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MA03_01505 PF07992 Pyridine nucleotide-disulphide oxidoreductase MA03_01525 PF00899 ThiF family MA03_01540 PF03749 Sugar fermentation stimulation protein RE domain MA03_01540 PF17746 SfsA N-terminal OB domain MA03_01555 PF01738 Dienelactone hydrolase family MA03_01555 PF00156 Phosphoribosyl transferase domain MA03_01560 PF01300 Telomere recombination MA03_01560 PF03481 Putative GTP-binding controlling metal-binding MA03_01570 PF00578 AhpC/TSA family MA03_01570 PF10417 C-terminal domain of 1-Cys peroxiredoxin MA03_01595 PF02502 Ribose/Galactose Isomerase MA03_01615 PF01547 Bacterial extracellular solute-binding protein MA03_01620 PF00528 Binding-protein-dependent transport system inner membrane component MA03_01625 PF00528 Binding-protein-dependent transport system inner membrane component MA03_01635 PF00534 Glycosyl transferases group 1 MA03_01655 PF09163 Formate dehydrogenase N, transmembrane MA03_01655 PF12800 4Fe-4S binding domain MA03_01655 PF13247 4Fe-4S dicluster domain MA03_01660 PF01568 Molydopterin dinucleotide binding domain MA03_01660 PF00384 Molybdopterin oxidoreductase MA03_01660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MA03_01670 PF00753 Metallo-beta-lactamase superfamily MA03_01670 PF16123 Hydroxyacylglutathione hydrolase C-terminus MA03_01680 PF00291 Pyridoxal-phosphate dependent enzyme MA03_01720 PF00004 ATPase family associated with various cellular activities (AAA) MA03_01720 PF05362 Lon protease (S16) C-terminal proteolytic domain MA03_01735 PF00881 Nitroreductase family MA03_01750 PF00005 ABC transporter MA03_01755 PF12704 MacB-like periplasmic core domain MA03_01755 PF02687 FtsX-like permease family MA03_01760 PF00005 ABC transporter MA03_01765 PF00005 ABC transporter MA03_01795 PF02913 FAD linked oxidases, C-terminal domain MA03_01795 PF01565 FAD binding domain MA03_01800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MA03_01800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MA03_01810 PF01266 FAD dependent oxidoreductase MA03_01825 PF00924 Mechanosensitive ion channel MA03_01825 PF05552 Conserved TM helix MA03_01845 PF00152 tRNA synthetases class II (D, K and N) MA03_01845 PF01336 OB-fold nucleic acid binding domain MA03_01860 PF02769 AIR synthase related protein, C-terminal domain MA03_01860 PF00586 AIR synthase related protein, N-terminal domain MA03_01875 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 MA03_01875 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain MA03_01880 PF00106 short chain dehydrogenase MA03_01885 PF00005 ABC transporter MA03_01920 PF00528 Binding-protein-dependent transport system inner membrane component MA03_01960 PF00005 ABC transporter MA03_01975 PF00005 ABC transporter MA03_01975 PF02687 FtsX-like permease family MA03_01975 PF12704 MacB-like periplasmic core domain MA03_01980 PF00005 ABC transporter MA03_01990 PF01924 Hydrogenase formation hypA family MA03_01995 PF07992 Pyridine nucleotide-disulphide oxidoreductase MA03_01995 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MA03_01995 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MA03_01995 PF04324 BFD-like [2Fe-2S] binding domain MA03_01995 PF18267 Rubredoxin NAD+ reductase C-terminal domain MA03_02000 PF00583 Acetyltransferase (GNAT) family MA03_02040 PF01568 Molydopterin dinucleotide binding domain MA03_02040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MA03_02040 PF00384 Molybdopterin oxidoreductase MA03_02050 PF00293 NUDIX domain MA03_02055 PF00881 Nitroreductase family MA03_02065 PF00294 pfkB family carbohydrate kinase MA03_02075 PF01979 Amidohydrolase family MA03_02095 PF03853 YjeF-related protein N-terminus MA03_02095 PF01256 Carbohydrate kinase MA03_02100 PF01554 MatE MA03_02150 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02155 PF08402 TOBE domain MA03_02155 PF00005 ABC transporter MA03_02175 PF13520 Amino acid permease MA03_02190 PF01206 Sulfurtransferase TusA MA03_02190 PF11823 Protein of unknown function (DUF3343) MA03_02205 PF08240 Alcohol dehydrogenase GroES-like domain MA03_02205 PF00107 Zinc-binding dehydrogenase MA03_02210 PF01791 DeoC/LacD family aldolase MA03_02215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MA03_02215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MA03_02225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MA03_02225 PF00326 Prolyl oligopeptidase family MA03_02255 PF03600 Citrate transporter MA03_02260 PF01925 Sulfite exporter TauE/SafE MA03_02305 PF00701 Dihydrodipicolinate synthetase family MA03_02330 PF02245 Methylpurine-DNA glycosylase (MPG) MA03_02370 PF00939 Sodium:sulfate symporter transmembrane region MA03_02375 PF00005 ABC transporter MA03_02375 PF08402 TOBE domain MA03_02380 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02390 PF13416 Bacterial extracellular solute-binding protein MA03_02420 PF00005 ABC transporter MA03_02420 PF08402 TOBE domain MA03_02425 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02455 PF13439 Glycosyltransferase Family 4 MA03_02485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MA03_02490 PF10609 NUBPL iron-transfer P-loop NTPase MA03_02490 PF01883 Iron-sulfur cluster assembly protein MA03_02500 PF03600 Citrate transporter MA03_02535 PF01032 FecCD transport family MA03_02540 PF00005 ABC transporter MA03_02545 PF13419 Haloacid dehalogenase-like hydrolase MA03_02560 PF00005 ABC transporter MA03_02560 PF17912 MalK OB fold domain MA03_02560 PF03459 TOBE domain MA03_02565 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02570 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02600 PF01588 Putative tRNA binding domain MA03_02600 PF08264 Anticodon-binding domain of tRNA MA03_02600 PF09334 tRNA synthetases class I (M) MA03_02610 PF00689 Cation transporting ATPase, C-terminus MA03_02610 PF00690 Cation transporter/ATPase, N-terminus MA03_02615 PF05175 Methyltransferase small domain MA03_02615 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus MA03_02630 PF00561 alpha/beta hydrolase fold MA03_02650 PF00005 ABC transporter MA03_02650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MA03_02655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MA03_02655 PF00005 ABC transporter MA03_02660 PF12911 N-terminal TM domain of oligopeptide transport permease C MA03_02660 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02665 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MA03_02675 PF01470 Pyroglutamyl peptidase MA03_02680 PF01545 Cation efflux family MA03_02685 PF00005 ABC transporter MA03_02685 PF08402 TOBE domain MA03_02690 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02695 PF00528 Binding-protein-dependent transport system inner membrane component MA03_02735 PF00171 Aldehyde dehydrogenase family MA03_02760 PF13520 Amino acid permease MA03_02890 PF18019 HD domain MA03_02990 PF13614 AAA domain MA03_03015 PF00082 Subtilase family MA03_03015 PF05922 Peptidase inhibitor I9 MA03_03020 PF02634 FdhD/NarQ family MA03_03025 PF00005 ABC transporter MA03_03025 PF13732 Domain of unknown function (DUF4162) MA03_03045 PF02310 B12 binding domain MA03_03045 PF02607 B12 binding domain MA03_03080 PF00005 ABC transporter MA03_03095 PF00478 IMP dehydrogenase / GMP reductase domain MA03_03095 PF00571 CBS domain MA03_03130 PF00005 ABC transporter MA03_03130 PF13732 Domain of unknown function (DUF4162) MA03_03140 PF00902 Sec-independent protein translocase protein (TatC) MA03_03170 PF00005 ABC transporter MA03_03175 PF01040 UbiA prenyltransferase family MA03_03180 PF11838 ERAP1-like C-terminal domain MA03_03180 PF01433 Peptidase family M1 domain MA03_03185 PF09261 Alpha mannosidase middle domain MA03_03185 PF07748 Glycosyl hydrolases family 38 C-terminal domain MA03_03185 PF01074 Glycosyl hydrolases family 38 N-terminal domain MA03_03195 PF00107 Zinc-binding dehydrogenase MA03_03195 PF08240 Alcohol dehydrogenase GroES-like domain MA03_03200 PF00005 ABC transporter MA03_03205 PF02653 Branched-chain amino acid transport system / permease component MA03_03220 PF01458 Uncharacterized protein family (UPF0051) MA03_03225 PF00005 ABC transporter MA03_03240 PF07690 Major Facilitator Superfamily MA03_03250 PF01914 MarC family integral membrane protein MA03_03285 PF03916 Polysulphide reductase, NrfD MA03_03290 PF13247 4Fe-4S dicluster domain MA03_03295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MA03_03295 PF00384 Molybdopterin oxidoreductase MA03_03295 PF01568 Molydopterin dinucleotide binding domain MA03_03295 PF10518 TAT (twin-arginine translocation) pathway signal sequence MA03_03325 PF13298 DNA polymerase Ligase (LigD) MA03_03325 PF01068 ATP dependent DNA ligase domain MA03_03325 PF04679 ATP dependent DNA ligase C terminal region MA03_03330 PF01048 Phosphorylase superfamily MA03_03340 PF13732 Domain of unknown function (DUF4162) MA03_03340 PF00005 ABC transporter MA03_03350 PF00596 Class II Aldolase and Adducin N-terminal domain MA03_03365 PF00005 ABC transporter MA03_03365 PF00664 ABC transporter transmembrane region MA03_03375 PF00528 Binding-protein-dependent transport system inner membrane component MA03_03380 PF00528 Binding-protein-dependent transport system inner membrane component MA03_03385 PF01547 Bacterial extracellular solute-binding protein MA03_03395 PF01370 NAD dependent epimerase/dehydratase family MA03_03410 PF00690 Cation transporter/ATPase, N-terminus MA03_03410 PF00689 Cation transporting ATPase, C-terminus MA03_03440 PF00291 Pyridoxal-phosphate dependent enzyme MA03_03455 PF00795 Carbon-nitrogen hydrolase MA03_03475 PF01209 ubiE/COQ5 methyltransferase family MA03_03480 PF13186 Iron-sulfur cluster-binding domain MA03_03480 PF04055 Radical SAM superfamily MA03_03490 PF04073 Aminoacyl-tRNA editing domain MA03_03505 PF00293 NUDIX domain MA03_03530 PF00005 ABC transporter MA03_03535 PF12399 Branched-chain amino acid ATP-binding cassette transporter MA03_03535 PF00005 ABC transporter MA03_03595 PF02535 ZIP Zinc transporter MA03_03620 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain MA03_03620 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain MA03_03625 PF13180 PDZ domain MA03_03630 PF11975 Family 4 glycosyl hydrolase C-terminal domain MA03_03630 PF02056 Family 4 glycosyl hydrolase MA03_03645 PF01658 Myo-inositol-1-phosphate synthase MA03_03650 PF01966 HD domain MA03_03675 PF13186 Iron-sulfur cluster-binding domain MA03_03675 PF04055 Radical SAM superfamily MA03_03685 PF00271 Helicase conserved C-terminal domain MA03_03685 PF00176 SNF2 family N-terminal domain MA03_03740 PF00210 Ferritin-like domain MA03_03760 PF01980 tRNA-methyltransferase O MA03_03800 PF00437 Type II/IV secretion system protein MA03_03855 PF08402 TOBE domain MA03_03855 PF00005 ABC transporter MA03_03860 PF00528 Binding-protein-dependent transport system inner membrane component MA03_03880 PF00005 ABC transporter MA03_03895 PF01370 NAD dependent epimerase/dehydratase family MA03_03910 PF00578 AhpC/TSA family MA03_03915 PF01906 Putative heavy-metal-binding MA03_03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MA03_03920 PF03466 LysR substrate binding domain MA03_03935 PF12800 4Fe-4S binding domain MA03_03935 PF13247 4Fe-4S dicluster domain MA03_03940 PF01568 Molydopterin dinucleotide binding domain MA03_03940 PF00384 Molybdopterin oxidoreductase MA03_03940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MA03_03975 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MA03_03975 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MA03_03980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MA03_03980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MA03_03985 PF00156 Phosphoribosyl transferase domain MA03_04005 PF01979 Amidohydrolase family MA03_04010 PF01180 Dihydroorotate dehydrogenase MA03_04015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MA03_04020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MA03_04020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MA03_04020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MA03_04035 PF00403 Heavy-metal-associated domain MA03_04040 PF00117 Glutamine amidotransferase class-I MA03_04040 PF06418 CTP synthase N-terminus MA03_04050 PF17912 MalK OB fold domain MA03_04050 PF00005 ABC transporter MA03_04050 PF03459 TOBE domain MA03_04080 PF00005 ABC transporter MA03_04090 PF03956 Lysine exporter LysO MA03_04095 PF00106 short chain dehydrogenase MA03_04105 PF09335 SNARE associated Golgi protein MA03_04110 PF00085 Thioredoxin MA03_04120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MA03_04120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MA03_04125 PF04324 BFD-like [2Fe-2S] binding domain MA03_04125 PF01266 FAD dependent oxidoreductase MA03_04130 PF13085 2Fe-2S iron-sulfur cluster binding domain MA03_04130 PF13183 4Fe-4S dicluster domain MA03_04160 PF07664 Ferrous iron transport protein B C terminus MA03_04160 PF17910 FeoB cytosolic helical domain MA03_04160 PF02421 Ferrous iron transport protein B MA03_04160 PF07670 Nucleoside recognition MA03_04160 PF04023 FeoA domain MA03_04175 PF01325 Iron dependent repressor, N-terminal DNA binding domain MA03_04175 PF02742 Iron dependent repressor, metal binding and dimerisation domain MA03_04185 PF10509 Galactokinase galactose-binding signature MA03_04185 PF08544 GHMP kinases C terminal MA03_04185 PF00288 GHMP kinases N terminal domain MA03_04200 PF00232 Glycosyl hydrolase family 1 MA03_04220 PF00005 ABC transporter MA03_04235 PF00156 Phosphoribosyl transferase domain MA03_04235 PF09182 Bacterial purine repressor, N-terminal MA03_04245 PF03613 PTS system mannose/fructose/sorbose family IID component MA03_04265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MA03_04265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MA03_04275 PF01380 SIS domain MA03_04280 PF01979 Amidohydrolase family MA03_04285 PF02896 PEP-utilising enzyme, TIM barrel domain MA03_04285 PF05524 PEP-utilising enzyme, N-terminal MA03_04285 PF00391 PEP-utilising enzyme, mobile domain MA03_04290 PF00381 PTS HPr component phosphorylation site MA03_04295 PF13580 SIS domain MA03_04300 PF00361 Proton-conducting membrane transporter MA03_04310 PF00361 Proton-conducting membrane transporter MA03_04315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MA03_04330 PF00146 NADH dehydrogenase MA03_04335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MA03_04340 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MA03_04345 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MA03_04355 PF00361 Proton-conducting membrane transporter MA03_04375 PF00146 NADH dehydrogenase MA03_04385 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MA03_04390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MA03_04415 PF00571 CBS domain MA03_04415 PF00478 IMP dehydrogenase / GMP reductase domain MA03_04425 PF00958 GMP synthase C terminal domain MA03_04425 PF02540 NAD synthase MA03_04425 PF00117 Glutamine amidotransferase class-I MA03_04430 PF04055 Radical SAM superfamily MA03_04430 PF00919 Uncharacterized protein family UPF0004 MA03_04430 PF01938 TRAM domain MA03_04445 PF03099 Biotin/lipoate A/B protein ligase family MA03_04445 PF02237 Biotin protein ligase C terminal domain MA03_04445 PF08279 HTH domain MA03_04450 PF16363 GDP-mannose 4,6 dehydratase MA03_04455 PF06745 KaiC MA03_04465 PF00528 Binding-protein-dependent transport system inner membrane component MA03_04475 PF00005 ABC transporter MA03_04480 PF03453 MoeA N-terminal region (domain I and II) MA03_04480 PF00994 Probable molybdopterin binding domain MA03_04480 PF03454 MoeA C-terminal region (domain IV) MA03_04490 PF00708 Acylphosphatase MA03_04510 PF01676 Metalloenzyme superfamily MA03_04510 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase MA03_04520 PF02540 NAD synthase MA03_04525 PF07690 Major Facilitator Superfamily MA03_04535 PF01040 UbiA prenyltransferase family MA03_04545 PF01891 Cobalt uptake substrate-specific transmembrane region MA03_04560 PF00005 ABC transporter MA03_04580 PF01494 FAD binding domain MA03_04590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MA03_04590 PF01411 tRNA synthetases class II (A) MA03_04590 PF02272 DHHA1 domain MA03_04610 PF02223 Thymidylate kinase MA03_04635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MA03_04635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MA03_04640 PF00270 DEAD/DEAH box helicase MA03_04640 PF00271 Helicase conserved C-terminal domain MA03_04640 PF08494 DEAD/H associated MA03_04700 PF02310 B12 binding domain MA03_04700 PF02607 B12 binding domain MA03_04715 PF01230 HIT domain MA03_04730 PF01975 Survival protein SurE MA03_04735 PF03266 NTPase MA03_04740 PF00465 Iron-containing alcohol dehydrogenase MA03_04760 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MA03_04760 PF03484 tRNA synthetase B5 domain MA03_04770 PF00266 Aminotransferase class-V MA03_04775 PF00303 Thymidylate synthase MA03_04780 PF00248 Aldo/keto reductase family MA03_04790 PF00005 ABC transporter MA03_04795 PF00005 ABC transporter MA03_04800 PF02361 Cobalt transport protein MA03_04810 PF00571 CBS domain MA03_04810 PF03448 MgtE intracellular N domain MA03_04810 PF01769 Divalent cation transporter MA03_04840 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MA03_04840 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MA03_04840 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MA03_04845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MA03_04860 PF01939 Endonuclease NucS MA03_04865 PF01435 Peptidase family M48 MA03_04895 PF00152 tRNA synthetases class II (D, K and N) MA03_04895 PF01336 OB-fold nucleic acid binding domain MA03_04905 PF00271 Helicase conserved C-terminal domain MA03_04905 PF00270 DEAD/DEAH box helicase MA03_04905 PF08494 DEAD/H associated MA03_04925 PF06480 FtsH Extracellular MA03_04925 PF01434 Peptidase family M41 MA03_04925 PF00004 ATPase family associated with various cellular activities (AAA) MA03_04925 PF17862 AAA+ lid domain MA03_04935 PF00271 Helicase conserved C-terminal domain MA03_04935 PF00270 DEAD/DEAH box helicase MA03_04935 PF08494 DEAD/H associated MA03_04970 PF01266 FAD dependent oxidoreductase MA03_04985 PF07992 Pyridine nucleotide-disulphide oxidoreductase MA03_04985 PF17806 Sarcosine oxidase A3 domain MA03_05055 PF00480 ROK family MA03_05060 PF01406 tRNA synthetases class I (C) catalytic domain MA03_05060 PF09190 DALR domain MA03_05070 PF00005 ABC transporter MA03_05080 PF00497 Bacterial extracellular solute-binding proteins, family 3 MA03_05090 PF10609 NUBPL iron-transfer P-loop NTPase MA03_05100 PF13416 Bacterial extracellular solute-binding protein MA03_05115 PF00005 ABC transporter MA03_05115 PF08402 TOBE domain MA03_05130 PF01725 Ham1 family MA03_05180 PF00368 Hydroxymethylglutaryl-coenzyme A reductase MA03_05220 PF05175 Methyltransferase small domain MA03_05220 PF17827 PrmC N-terminal domain MA03_05225 PF01883 Iron-sulfur cluster assembly protein MA03_05240 PF02562 PhoH-like protein MA03_05280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MA03_05280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MA03_05280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MA03_05280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MA03_05290 PF01926 50S ribosome-binding GTPase MA03_05295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MA03_05295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MA03_05305 PF00107 Zinc-binding dehydrogenase MA03_05305 PF08240 Alcohol dehydrogenase GroES-like domain MA03_05310 PF01261 Xylose isomerase-like TIM barrel MA03_05320 PF00583 Acetyltransferase (GNAT) family MA03_05335 PF09180 Prolyl-tRNA synthetase, C-terminal MA03_05335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MA03_05335 PF03129 Anticodon binding domain MA03_05340 PF00288 GHMP kinases N terminal domain MA03_05340 PF08544 GHMP kinases C terminal MA03_05340 PF10509 Galactokinase galactose-binding signature MA03_05345 PF00291 Pyridoxal-phosphate dependent enzyme MA03_05400 PF01145 SPFH domain / Band 7 family MA03_05420 PF01791 DeoC/LacD family aldolase MA03_05450 PF02416 mttA/Hcf106 family MA03_05460 PF01467 Cytidylyltransferase-like MA03_05465 PF01351 Ribonuclease HII MA03_05470 PF00132 Bacterial transferase hexapeptide (six repeats) MA03_05485 PF00501 AMP-binding enzyme MA03_05485 PF13193 AMP-binding enzyme C-terminal domain MA03_05485 PF16177 Acetyl-coenzyme A synthetase N-terminus MA03_05525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MA03_05525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MA03_05525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MA03_05525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MA03_05530 PF03966 Trm112p-like protein MA03_05535 PF00749 tRNA synthetases class I (E and Q), catalytic domain MA03_05535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MA03_05585 PF01921 tRNA synthetases class I (K) MA03_05615 PF03167 Uracil DNA glycosylase superfamily MA03_05640 PF06745 KaiC MA03_05650 PF00534 Glycosyl transferases group 1 MA03_05650 PF08323 Starch synthase catalytic domain MA03_05655 PF09095 Domain of unknown function (DUF1926) MA03_05655 PF09094 Domain of unknown function (DUF1925) MA03_05655 PF03065 Glycosyl hydrolase family 57 MA03_05695 PF01255 Putative undecaprenyl diphosphate synthase MA03_05700 PF01791 DeoC/LacD family aldolase MA03_05705 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MA03_05705 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MA03_05710 PF00108 Thiolase, N-terminal domain MA03_05710 PF02803 Thiolase, C-terminal domain MA03_05725 PF01189 16S rRNA methyltransferase RsmB/F MA03_05725 PF01029 NusB family MA03_05725 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MA03_05750 PF00162 Phosphoglycerate kinase MA03_05770 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MA03_05770 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MA03_05785 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MA03_05785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MA03_05785 PF03129 Anticodon binding domain MA03_05790 PF00294 pfkB family carbohydrate kinase MA03_05800 PF04679 ATP dependent DNA ligase C terminal region MA03_05800 PF01068 ATP dependent DNA ligase domain MA03_05800 PF04675 DNA ligase N terminus MA03_05810 PF01871 AMMECR1 MA03_05910 PF00338 Ribosomal protein S10p/S20e MA03_05915 PF03143 Elongation factor Tu C-terminal domain MA03_05915 PF00009 Elongation factor Tu GTP binding domain MA03_05915 PF03144 Elongation factor Tu domain 2 MA03_05920 PF02224 Cytidylate kinase MA03_05930 PF00152 tRNA synthetases class II (D, K and N) MA03_05930 PF01336 OB-fold nucleic acid binding domain MA03_05950 PF01884 PcrB family MA03_06005 PF04055 Radical SAM superfamily MA03_06005 PF06463 Molybdenum Cofactor Synthesis C MA03_06010 PF03129 Anticodon binding domain MA03_06010 PF13393 Histidyl-tRNA synthetase MA03_06015 PF01380 SIS domain MA03_06015 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain MA03_06020 PF01904 Protein of unknown function DUF72 MA03_06025 PF04493 Endonuclease V MA03_06035 PF00557 Metallopeptidase family M24 MA03_06050 PF00294 pfkB family carbohydrate kinase MA03_06050 PF01467 Cytidylyltransferase-like MA03_06085 PF12706 Beta-lactamase superfamily domain MA03_06100 PF00118 TCP-1/cpn60 chaperonin family MA03_06125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MA03_06180 PF00437 Type II/IV secretion system protein MA03_06260 PF01507 Phosphoadenosine phosphosulfate reductase family MA03_06265 PF00528 Binding-protein-dependent transport system inner membrane component MA03_06270 PF00528 Binding-protein-dependent transport system inner membrane component MA03_06280 PF00128 Alpha amylase, catalytic domain MA03_06280 PF02903 Alpha amylase, N-terminal ig-like domain MA03_06280 PF16657 Maltogenic Amylase, C-terminal domain MA03_06295 PF00672 HAMP domain MA03_06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MA03_06295 PF00512 His Kinase A (phospho-acceptor) domain MA03_06295 PF13426 PAS domain MA03_06295 PF14827 Double sensory domain of two-component sensor kinase MA03_06405 PF01142 tRNA pseudouridine synthase D (TruD) MA03_06420 PF01434 Peptidase family M41 MA03_06420 PF00004 ATPase family associated with various cellular activities (AAA) MA03_06420 PF17862 AAA+ lid domain MA03_06420 PF06480 FtsH Extracellular MA03_06445 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) MA03_06470 PF02361 Cobalt transport protein MA03_06480 PF00005 ABC transporter MA03_06485 PF06071 Protein of unknown function (DUF933) MA03_06485 PF01926 50S ribosome-binding GTPase MA03_06515 PF01048 Phosphorylase superfamily MA03_06525 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MA03_06525 PF05221 S-adenosyl-L-homocysteine hydrolase MA03_06530 PF04055 Radical SAM superfamily MA03_06530 PF01938 TRAM domain MA03_06530 PF00919 Uncharacterized protein family UPF0004 MA03_06540 PF00009 Elongation factor Tu GTP binding domain MA03_06540 PF03144 Elongation factor Tu domain 2 MA03_06540 PF14492 Elongation Factor G, domain II MA03_06540 PF03764 Elongation factor G, domain IV MA03_06540 PF00679 Elongation factor G C-terminus MA03_06550 PF00347 Ribosomal protein L6 MA03_06565 PF01042 Endoribonuclease L-PSP MA03_06570 PF13291 ACT domain MA03_06570 PF00291 Pyridoxal-phosphate dependent enzyme MA03_06580 PF00348 Polyprenyl synthetase MA03_06590 PF01894 Uncharacterised protein family UPF0047 MA03_06595 PF13380 CoA binding domain MA03_06595 PF13607 Succinyl-CoA ligase like flavodoxin domain MA03_06595 PF00583 Acetyltransferase (GNAT) family MA03_06600 PF02653 Branched-chain amino acid transport system / permease component MA03_06600 PF11862 Domain of unknown function (DUF3382) MA03_06610 PF08402 TOBE domain MA03_06610 PF00005 ABC transporter MA03_06615 PF00005 ABC transporter MA03_06615 PF12399 Branched-chain amino acid ATP-binding cassette transporter MA03_06625 PF06463 Molybdenum Cofactor Synthesis C MA03_06625 PF04055 Radical SAM superfamily MA03_06640 PF00374 Nickel-dependent hydrogenase MA03_06660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MA03_06660 PF00391 PEP-utilising enzyme, mobile domain MA03_06660 PF02896 PEP-utilising enzyme, TIM barrel domain MA03_06670 PF00437 Type II/IV secretion system protein MA03_06710 PF00312 Ribosomal protein S15 MA03_06730 PF01037 Lrp/AsnC ligand binding domain MA03_06730 PF13404 AsnC-type helix-turn-helix domain MA03_06735 PF01380 SIS domain MA03_06820 PF00301 Rubredoxin MA03_06820 PF00753 Metallo-beta-lactamase superfamily MA03_06820 PF00258 Flavodoxin MA03_06825 PF02881 SRP54-type protein, helical bundle domain MA03_06825 PF02978 Signal peptide binding domain MA03_06825 PF00448 SRP54-type protein, GTPase domain MA03_06850 PF01253 Translation initiation factor SUI1 MA03_06855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MA03_06860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MA03_06860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MA03_06950 PF13476 AAA domain MA03_06970 PF06745 KaiC MA03_06985 PF00013 KH domain MA03_06985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MA03_06985 PF00575 S1 RNA binding domain MA03_06985 PF03725 3' exoribonuclease family, domain 2 MA03_06985 PF01138 3' exoribonuclease family, domain 1 MA03_07010 PF00696 Amino acid kinase family MA03_07015 PF02629 CoA binding domain MA03_07015 PF00549 CoA-ligase MA03_07020 PF00549 CoA-ligase MA03_07020 PF08442 ATP-grasp domain MA03_07030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MA03_07030 PF10996 Beta-Casp domain MA03_07030 PF00753 Metallo-beta-lactamase superfamily MA03_07035 PF00011 Hsp20/alpha crystallin family MA03_07050 PF00814 Glycoprotease family MA03_07090 PF00750 tRNA synthetases class I (R) MA03_07090 PF03485 Arginyl tRNA synthetase N terminal domain MA03_07090 PF05746 DALR anticodon binding domain MA03_07095 PF09105 Elongation factor SelB, winged helix MA03_07095 PF09106 Elongation factor SelB, winged helix MA03_07095 PF03144 Elongation factor Tu domain 2 MA03_07095 PF09107 Elongation factor SelB, winged helix MA03_07095 PF00009 Elongation factor Tu GTP binding domain MA03_07100 PF01230 HIT domain MA03_07205 PF17762 HTH domain found in ParB protein MA03_07205 PF02195 ParB-like nuclease domain MA03_07345 PF00252 Ribosomal protein L16p/L10e MA03_07395 PF00237 Ribosomal protein L22p/L17e MA03_07400 PF00189 Ribosomal protein S3, C-terminal domain MA03_07400 PF07650 KH domain MA03_07405 PF00831 Ribosomal L29 protein MA03_07415 PF00366 Ribosomal protein S17 MA03_07420 PF00238 Ribosomal protein L14p/L23e MA03_07435 PF00579 tRNA synthetases class I (W and Y) MA03_07475 PF00145 C-5 cytosine-specific DNA methylase MA03_07475 PF01381 Helix-turn-helix MA03_07495 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 MA03_07495 PF00953 Glycosyl transferase family 4 MA03_07555 PF00535 Glycosyl transferase family 2 MA03_07565 PF13439 Glycosyltransferase Family 4 MA03_07565 PF00534 Glycosyl transferases group 1 MA03_07635 PF02403 Seryl-tRNA synthetase N-terminal domain MA03_07635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MA03_07660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MA03_07670 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MA03_07670 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MA03_07675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MA03_07680 PF00270 DEAD/DEAH box helicase MA03_07680 PF01751 Toprim domain MA03_07680 PF17915 Reverse gyrase zinc finger MA03_07680 PF01131 DNA topoisomerase MA03_07685 PF01467 Cytidylyltransferase-like MA03_07685 PF00293 NUDIX domain MA03_07715 PF00398 Ribosomal RNA adenine dimethylase MA03_07720 PF01138 3' exoribonuclease family, domain 1 MA03_07720 PF03725 3' exoribonuclease family, domain 2 MA03_07725 PF03725 3' exoribonuclease family, domain 2 MA03_07725 PF01138 3' exoribonuclease family, domain 1 MA03_07745 PF01189 16S rRNA methyltransferase RsmB/F MA03_07745 PF01029 NusB family MA03_07770 PF00270 DEAD/DEAH box helicase MA03_07770 PF08148 DSHCT (NUC185) domain MA03_07770 PF00271 Helicase conserved C-terminal domain MA03_07780 PF00009 Elongation factor Tu GTP binding domain MA03_07780 PF03144 Elongation factor Tu domain 2 MA03_07780 PF11987 Translation-initiation factor 2 MA03_07780 PF04760 Translation initiation factor IF-2, N-terminal region MA03_07790 PF01966 HD domain MA03_07795 PF04055 Radical SAM superfamily MA03_07795 PF01938 TRAM domain MA03_07795 PF00919 Uncharacterized protein family UPF0004 MA03_07800 PF06745 KaiC MA03_07845 PF09281 Taq polymerase, exonuclease MA03_07845 PF01367 5'-3' exonuclease, C-terminal SAM fold MA03_07845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MA03_07845 PF00476 DNA polymerase family A MA03_07890 PF00448 SRP54-type protein, GTPase domain MA03_07890 PF02881 SRP54-type protein, helical bundle domain MA03_07895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MA03_07895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MA03_07925 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MA03_08040 PF14572 Phosphoribosyl synthetase-associated domain MA03_08040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MA03_08045 PF01008 Initiation factor 2 subunit family MA03_08050 PF01008 Initiation factor 2 subunit family MA03_08075 PF01728 FtsJ-like methyltransferase MA03_08115 PF02834 LigT like Phosphoesterase MA03_08155 PF02637 GatB domain MA03_08155 PF02934 GatB/GatE catalytic domain MA03_08235 PF01435 Peptidase family M48 MA03_08255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MA03_08255 PF02874 ATP synthase alpha/beta family, beta-barrel domain MA03_08255 PF16886 ATPsynthase alpha/beta subunit N-term extension MA03_08260 PF02874 ATP synthase alpha/beta family, beta-barrel domain MA03_08260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MA03_08280 PF01496 V-type ATPase 116kDa subunit family MA03_08290 PF13597 Anaerobic ribonucleoside-triphosphate reductase MA03_08290 PF03477 ATP cone domain MA03_08310 PF02568 Thiamine biosynthesis protein (ThiI) MA03_08310 PF02926 THUMP domain MA03_08330 PF04389 Peptidase family M28 MA03_08330 PF04151 Bacterial pre-peptidase C-terminal domain MA03_08335 PF00708 Acylphosphatase MA03_08335 PF17788 HypF Kae1-like domain MA03_08335 PF01300 Telomere recombination MA03_08335 PF07503 HypF finger MA03_08350 PF08264 Anticodon-binding domain of tRNA MA03_08350 PF00133 tRNA synthetases class I (I, L, M and V) MA03_08350 PF10458 Valyl tRNA synthetase tRNA binding arm MA03_08365 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MA03_08415 PF07687 Peptidase dimerisation domain MA03_08415 PF01546 Peptidase family M20/M25/M40 MA03_08425 PF01967 MoaC family MA03_08430 PF00994 Probable molybdopterin binding domain MA03_08440 PF00696 Amino acid kinase family MA03_08440 PF01472 PUA domain MA03_08445 PF00753 Metallo-beta-lactamase superfamily MA03_08445 PF10996 Beta-Casp domain MA03_08445 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MA03_08450 PF00227 Proteasome subunit MA03_08460 PF06480 FtsH Extracellular MA03_08460 PF17862 AAA+ lid domain MA03_08460 PF00004 ATPase family associated with various cellular activities (AAA) MA03_08460 PF01434 Peptidase family M41