    trd_0004    2056 ..    2070 +  -3.4  -2.62184   TAACGGGCGGCTCGA               CCGCGG GTG TCACGG               TCGTCTCCAGCGCCC  39 280
   trd_A0003    3118 ..    3142 +  -5.5  -3.56092   GTCCAGCGATCAGCT          CGAACAGGGGG CGC CCCCCACCTCG          TTTCGCCACTCGTGG  57 330
    trd_0007 NONE
        pdxH NONE
   trd_A0008    8729 ..    8745 +  -9.4  -3.08679   CCGTCCGGTGACCAG              GCGAGC CCCCT GCTCGC              TCTTCCCTCGGCGAG  60 113
   trd_A0009    9826 ..    9851 +  -3.9  -4.13767   CCGAAGCACGGTTCC         CGGCGAGC-TCG GCA CGACGATCGCGG         TTTTGCCCTCCAGGG  62 244
   trd_A0011 NONE
        pyrF   12457 ..   12478 +  -5.9  -3.31144   CGCATCGAACTCCTC           GACGGTC-AC CTC GTCGATCGTC           TTGTCCGGCTGCAGC  53 406
   trd_A0013   12945 ..   12962 +  -2.5   -3.5774   CAGGAGCGCGAGTCC             GCCGACG ATCC CGGCTGC              TTTGGAGCGTTCGCT  50 368
    trd_0015   16090 ..   16112 +  -7.6  -2.94726   GCGCCAGGGGCGCAG           CAGCCGGCGT GGT ACCGCGGCTG           TATGGTGTTCTCGGG  54 357
        cas6 NONE
   trd_A0020 NONE
   trd_A0021 NONE
    trd_0017 NONE
   trd_A0022 NONE
        cst2 NONE
   trd_A0023 NONE
       cas5t NONE
   trd_A0024 NONE
        cas3 NONE
   trd_A0025 NONE
        cas4 NONE
   trd_A0026 NONE
        cas1   25037 ..   25064 +  -2.6  -3.08464   GGGTGAGCAAGCGTA        CGTTC-CCTTCGC CCT GCGCGGTTGAACG        TTCGCTGCATCCTGC  42 1
    trd_0024   25449 ..   25466 +  -4.7   -3.9392   GAACGGGTCGACCCG             CGGGTGC TCGA GCGGCCG              TTCTTTCCCGTCCAC  60 85
        fliP   30034 ..   30054 +  -4.7  -3.05463   GCGTGAGCAGCCTCG           CCGGA-CG GAGGCG CGATCCGG            TTCGATCGACCAGGT  47 2
        fliQ NONE
    trd_0029 NONE
        fliR NONE
        flhB NONE
        flhA NONE
   trd_A0039 NONE
   trd_A0040 NONE
   trd_A0041 NONE
   trd_A0042 NONE
   trd_A0043 NONE
   trd_A0044 NONE
    trd_0031 NONE
   trd_A0045 NONE
    trd_0032 NONE
   trd_A0046 NONE
   trd_A0047 NONE
    trd_0033 NONE
    trd_0035 NONE
        flgK NONE
        flgL NONE
   trd_A0050 NONE
    trd_0036 NONE
        csrA   43049 ..   43066 +  -2.5  -3.78775   ACGCTCGCAGCGGTG             CCGTGGC TCCT GGCTCGG              TTTCGTGCTCGAGAA  53 2
   trd_A0052 NONE
    trd_0038   43457 ..   43470 +  -3.8  -3.18044   GTGCCAGGGGAGCAT               CGAG CGGAAA CTCG                TGGTTTTGTCGACTG  47 43
   trd_A0053 NONE
    trd_0039   44916 ..   44946 +  -3.1  -3.12351   GATACGAGACGGTCG       TGGCGCGGGGGTG AGATG CGTCCGCTCGTCA       TTCCCTATCGGGGAA  43 12
    trd_0040 NONE
   trd_A0056 NONE
    trd_0041 NONE
    trd_0042 NONE
    trd_0043 NONE
   trd_A0057 NONE
    trd_0044 NONE
   trd_A0058 NONE
    trd_0045 NONE
   trd_A0059 NONE
    trd_0046 NONE
   trd_A0060 NONE
   trd_A0061 NONE
   trd_A0062   51917 ..   51952 +  -5.5  -3.27774   CCAGCGTTCCAGCGC   CAGC-GCTGCGAGCTGCG TGG CG-AGCTCG-AGCAGCCG   TTCCTCGTTCGGCTG  51 15
   trd_A0065   54448 ..   54465 + -12.7  -2.66733   CGCGGAGCGCTTCCT             CGGCTCG CTTG CGAGCCG              TGATGTCGGTTAACA  68 67
    trd_0049   58994 ..   59005 +  -5.8  -2.54193   CTGACAACTGGTCGT                GTCG CGCT CGAC                 TCCGTTCCCGTGCTC  45 37
    trd_0050 NONE
    trd_0051   60627 ..   60640 +  -3.1  -3.28712   AACCGCTGGGCAATA               CG-GTC GGC GACACG               TTCTGCCCACGGGGC  45 287
    trd_0052 NONE
        mraZ NONE
        mraW NONE
    trd_0057 NONE
    trd_0058 NONE
    trd_0059 NONE
        mraY NONE
        murD NONE
        ftsW NONE
        murC NONE
   trd_A0085 NONE
   trd_A0086 NONE
        murB NONE
   trd_A0087 NONE
    trd_0065   75734 ..   75792 +    -8  -2.51312   GACCCAGCCGTTCTC CGGTTGAGTCGCCGGCGCCGCGCCCGGC GCGCG GTCGTCCGCGGCGTCG-TGAC-CGGCCA GTTCCTGGCTGCGTT  50 19
    trd_0066 NONE
    trd_0067 NONE
        ftsZ NONE
        nrdR NONE
    trd_0070 NONE
   trd_A0091 NONE
    trd_0072 NONE
    trd_0073   82915 ..   82935 +  -6.2  -3.03124   CGTTCGAGGCCGAGG           TGGCGGATG AATC CATC-GCCA            TATTCGGCGATGAAG  48 484
   trd_A0096 NONE
    trd_0075 NONE
   trd_A0097 NONE
    trd_0076 NONE
    trd_0077 NONE
   trd_A0098 NONE
   trd_A0099 NONE
    trd_0080   89902 ..   89912 +  -4.6  -2.88544   GCACGTCGCGGAGAC                 CGGT CCA GCCG                 TGTGTCACCATGGCG  45 113
   trd_A0102 NONE
   trd_A0103 NONE
   trd_A0104 NONE
   trd_A0105 NONE
        recG NONE
    trd_0086 NONE
        rpmB NONE
   trd_A0106  101001 ..  101027 +  -2.8  -3.05463   TCGCGAGGCGTAGCC         CCTGCCTCGGCA GGC TGCCCGATCAGG         TTGGATCGGGCAGCT  43 24
   trd_A0107 NONE
    trd_0094 NONE
   trd_A0108 NONE
    trd_0095 NONE
   trd_A0109 NONE
    trd_0096 NONE
        coaD NONE
    trd_0098  107446 ..  107472 +  -2.2  -3.29263   TCTCGGAGCAGCTGC         TGGGCGAGCT GGAACAG GGCTTGCGCA         TTGTGAGCCACCTCT  44 470
        trpE NONE
    trd_0103 NONE
        trpD NONE
        trpC NONE
        trpF NONE
   trd_A0119 NONE
        trpB NONE
        trpA NONE
        aroH NONE
   trd_A0121 NONE
        aroF NONE
   trd_A0122 NONE
    trd_0112 NONE
   trd_A0123  121373 ..  121400 +  -5.6  -2.62184   GTGGCGAGTCCTCGT        CGATCC-TCTTAC CGA GTGAGGCGGGTCG        TCATCTGCACAGGCC  45 409
   trd_A0126  123006 ..  123018 +  -9.1  -3.06183   GACCAGCCAGCAGGG                CTGCG CCC CGCAG                TTCGCTGAGCATCCG  60 342
   trd_A0128 NONE
   trd_A0129  124574 ..  124595 +  -7.9  -2.98493   CCACAGACGGCGATG           CCGCGGTCG CGGG CGATGGCGG            TGATTTCCTGCTGAA  54 389
   trd_A0132 NONE
   trd_A0133  128095 ..  128107 +  -4.8  -3.05384   CCGGCCCAGTAGCGC                TCGC AAACG GCGA                TTCGATGCAGACCGC  47 257
   trd_A0135 NONE
   trd_A0136 NONE
   trd_A0137 NONE
   trd_A0138 NONE
   trd_A0140  131141 ..  131179 +  -9.4  -3.33261   GAGCCCAGGACTCGA   GACCGTGAGCGTGTAGCG GAT CGCCGTTCGCTCGCCGTC   TTCTCGAAGTTCGGC  64 44
    trd_0125 NONE
   trd_A0143  133602 ..  133621 +  -6.4  -3.50853   TGGGGGTGCGCACTG            CCGCTC AGAAGAAC GAGCGG             TTATACTTACAAGGA  57 186
    trd_0126 NONE
   trd_A0145  134179 ..  134194 +    -6  -3.08679   GACAGGGGAACGCGC              CGGCGG GAGG CCGCGG               TCTTCGGTGGCACCA  49 114
    trd_0128  135332 ..  135348 +  -6.5  -2.62616   GATGGCCTGGACAAT              CGCTCGA TGC TCGATCG              TACTGTCGAGCATCC  47 392
   trd_A0147  138471 ..  138483 +  -3.3  -3.08812   CGGACGACACTGTCG                TCCGG CTC CCAGA                ATTTGTTGGCGAGCC  43 102
   trd_A0148  139258 ..  139282 +  -6.3  -3.75332   CGATCAGTTCGATTC          GCTCGATACGG GCG CGGTAGCGGGC          TTTGAGTTCCGCCGT  60 24
   trd_A0150 NONE
        rsgA NONE
   trd_A0152  142902 ..  142937 +    -4  -3.90112   CCATGTACCACAGGA    TGATGGCGA-CGTCATT CGC GAAGACGGTCTCCATCG    TTTGATTCCAGGAGA  58 368
   trd_A0157  148133 ..  148156 +  -5.2  -2.53213   CCTGTCCTGTTCTCT          CCCAGTTGGA AGCC TCCGATCGGG           TCCGTTCCGAGATTG  43 149
   trd_A0159  150003 ..  150022 +   -10  -3.28712   TCGCTGGCACCGAAT            CGCTGGAG ACGT TTCCAGCG             TTGTCGCGGGCGCGG  65 412
   trd_A0161  151497 ..  151510 +  -2.4  -2.52896   GGATCTCGTACGATG               TGAC GGCATA GTCA                TCCGTTGCAGCGTCC  38 104
   trd_A0162  153477 ..  153489 +  -4.7  -3.14848   TCTTGATTCCCGATT                GGCGG AGC CCACC                CTTTTGGTACAACCA  47 501
   trd_A0164 NONE
        lysX NONE
   trd_A0166 NONE
   trd_A0167  155723 ..  155748 +  -5.4  -3.07113   ATGGGGTCGCTCGCT         GCACGCAGTGC CTGGA GCAC-GAGTGC         TTCGCTGGCATCCTG  47 22
   trd_A0169  157669 ..  157687 +  -4.5  -3.01791   GTGAAGCCGGTGAAT             CCCTCGA GGATA TCGAGGA             TATTGACCAGGCCGT  44 68
   trd_A0175 NONE
        prpD  163226 ..  163242 +  -7.9  -3.29144   GCTGTTCAGCGTCTT              GCCAGGT CAG ACCCGGC              TTCTCACCGCGCTCG  57 22
        prpB NONE
   trd_A0178 NONE
   trd_A0179  164782 ..  164804 +  -2.6  -3.61398   CAGCGACTTCGCGCA           TCAGGGTG ACCAGCC CGCCCGGA           TTGTTGCCACGCGGG  50 4
   trd_A0180  165544 ..  165574 +  -3.8  -3.19602   CGATAGGGACTACGG       TTGACCAGCTCCGG ATC CTCGAGCAGGGCAG       TATTGGTCTCGAGCA  47 404
   trd_A0182 NONE
   trd_A0183 NONE
    trd_0162 NONE
   trd_A0184 NONE
   trd_A0185  169459 ..  169491 +  -3.1  -3.23447   CGACCGGCCCACTTC      CCGGGCCGCCACCGC CGT GCGGTGTCGAGAAGG      TCTTGTGCAAGTTGA  45 136
   trd_A0187  170031 ..  170045 +  -7.1  -3.37959   GCGAAACCGGGAAAG               CGAGC CACCA GCTCG               TTGATCTTCGGGTTG  55 15
   trd_A0189 NONE
    trd_0165 NONE
        argH NONE
        argA NONE
        lipA NONE
        lipB  175430 ..  175443 +  -3.7  -3.14344   TTTCGAGACGGCGTC               GCAGG AGGA CCAGC                TTCGTCGGCAACGTA  45 320
    trd_0171 NONE
        thiL NONE
   trd_A0197 NONE
   trd_A0198 NONE
    trd_0173 NONE
   trd_A0199 NONE
    trd_0174 NONE
    trd_0175 NONE
    trd_0176 NONE
    trd_0177 NONE
    trd_0178 NONE
    trd_0179 NONE
   trd_A0203 NONE
        hisH NONE
   trd_A0204  187098 ..  187113 +  -4.6  -2.83715   ACGCGTGGCGGTTTA              CCGTTG GAGG CACCGG               TGTGATCGTCATCCC  45 4
        hisA NONE
    trd_0182 NONE
   trd_A0205 NONE
        hisF  189887 ..  189899 +  -6.2  -2.82834   GGGGGATCGCAGGAA                GCCG TCTCT CGGC                TCTCCTGATACGGTG  47 166
    trd_0184  191283 ..  191308 + -16.9  -3.27525   AACAGCCGATCCGGA         CGGCCAGGTGG GATC TCACCTGGCCG          TTCCATTTCGGCGCA  89 53
   trd_A0208 NONE
   trd_A0209  193820 ..  193831 +  -2.2   -3.9461   TCGGCCTGGCGGAAC                GG-CG GGG CGACC                TTGTTCTTGACGACC  57 114
   trd_A0210 NONE
   trd_A0211 NONE
   trd_A0212 NONE
   trd_A0213  198741 ..  198754 +  -3.7  -2.74523   GCGGGTAACCGAAGA               CGGCG AGAC CACCG                TACTGTTCCCAATAG  42 311
   trd_A0214 NONE
   trd_A0215 NONE
   trd_A0216 NONE
    trd_0199 NONE
   trd_A0217  207387 ..  207398 +  -2.2  -3.63515   CCGCAGGACGTATAC                CG-GG ATG CCACG                TTGTTCGGCCTCGCG  50 62
   trd_A0218  207638 ..  207660 +  -2.6  -2.56715   CTGGTCGAGTCGGGG           CCGGCGTA CCGGGAA TCCGCTGG           TAGGTTCGTCGCGGT  38 46
   trd_A0219 NONE
   trd_A0220 NONE
        fliS NONE
   trd_A0222 NONE
   trd_A0223  211989 ..  212040 +  -3.7  -3.57144   ACGGGCGTTCGGCGC CCACGCGAACGG-C-TCGCTGGTGTG TGG CGTGTC-GCGATGACCGGTCGCGTCG TTTCGCGCTGGACGG  53 483
   trd_A0226 NONE
   trd_A0227 NONE
        ligA NONE
   trd_A0228  217820 ..  217842 +  -4.7  -2.71712   CAACGATCTCGACTG           GATGCTCGC CCACC GCGCGCAGC           GTTTCGCGGAGCGAG  44 207
   trd_A0232 NONE
   trd_A0233 NONE
        modA NONE
        modB NONE
   trd_A0236  224792 ..  224812 +  -6.7  -3.14132   CGCTCCGGCTTCAGC            CATGCCGAC GAG GTCGGCCAG            TTCCTCCCCACGACG  51 354
   trd_A0237  226524 ..  226564 +  -5.9  -3.29144   GCCGAACGGCCAACT  TGCCGAGCACGTGCTCGAC CTT GGCTTGCACGTACTCGACG  TTGTCGAAGGGATCG  51 206
    trd_0217 NONE
   trd_A0240 NONE
        speE  229209 ..  229239 +   -27  -4.07647   GACCATCGCTTTCGA       CGGGGGTACGGTGC GAC GCACCGTACCCCCG       TTTCGTTTGCGCTCT 100 46
   trd_A0241  229584 ..  229600 +  -2.9  -3.63515   ACTGTTGCACTGTCG              GGTTCGC GAG GTGGATC              TTGTTCGGGATACGA  51 1
   trd_A0243  230158 ..  230187 +  -2.9  -3.41961   GATCTGATCCAGCAC       GCTCTCGGTG AAGACCAGTGG C-CCGAGAGC       TTCCTTGATCATCCT  47 181
   trd_A0244  231562 ..  231579 +    -4  -2.52464   GGCACCTCGACGGAA             GCGGTC AAGTCA GCCCGC              TGGGTTACCCAGACC  41 155
   trd_A0246  233199 ..  233216 +  -3.4  -3.02144   GGGGGCGTTCCTCCG             TGACCA GCCCGA TGGTCG              TGTTGGCGACGATGA  42 502
   trd_A0247 NONE
    trd_0222 NONE
   trd_A0248 NONE
   trd_A0249 NONE
    trd_0223 NONE
   trd_A0250 NONE
   trd_A0251  238087 ..  238109 +  -3.2  -3.63744   AGCGGCTCAGGAAAC           CGGCGCACTC ATG GAGGGGGCGG           TCTTTTCGCGAACGG  51 223
   trd_A0255 NONE
        rfbB NONE
    trd_0230 NONE
   trd_A0256 NONE
    trd_0231 NONE
   trd_A0257 NONE
    trd_0232 NONE
   trd_A0258 NONE
    trd_0233 NONE
   trd_A0260 NONE
        aroC  246098 ..  246119 + -10.9  -2.70932   GGCTCGATGCGCAGT           CCGTCG-GGA AAC TCCTCGACGG           TGATTCCCAAGCGGC  62 217
        smpB  249269 ..  249290 +  -2.8   -3.0263   GGCGAGCGCCCGGCT           GGGCCGCC GGACAG GGCTGACC            TCTTGGCAGAATACT  42 129
    trd_0239  249707 ..  249731 + -15.7   -3.1733   CATCTCCACCAGAAA          GCGCCTCGGCA GCT TGTCGGGGCGC          TCGTTTTCTGCACCC  86 30
   trd_A0264  250799 ..  250812 +  -4.5  -3.88291   AAGGCTAATCGCCAA               TGGTC TTTT GGCCA                TTTCTGGACATGATG  58 496
   trd_A0266 NONE
   trd_A0267 NONE
   trd_A0268 NONE
   trd_A0269  255303 ..  255313 +  -8.2  -3.32844   ACCACCACTGTGGAC                 CGCG CGT CGCG                 TTCTGCGCTGCCACG  60 70
   trd_A0270 NONE
   trd_A0275  259917 ..  259957 +    -4  -3.37493   CGGTCGTGACACAGC GCGTGCCGGGATCGTGCTGG GGG CCGGGATGATC--GGCAGGC TTCGTATCTTGGCCA  49 126
    trd_0253  260480 ..  260492 +  -3.3  -3.13403   ACTGCGCCGGCGGAG                GCTGG TGG CAAGC                TCTTCCTCGGAGCGG  43 381
    trd_0257 NONE
    trd_0259 NONE
   trd_A0278 NONE
   trd_A0279 NONE
    trd_0260 NONE
    trd_0261 NONE
    trd_0262 NONE
   trd_A0280 NONE
    trd_0263 NONE
   trd_A0281 NONE
    trd_0264  271820 ..  271830 +  -8.2  -3.16177   AGTTCGACGCGGGGA                 CGCG CGA CGCG                 TTCGGTCTGTACCGT  57 195
    trd_0267 NONE
    trd_0268  277594 ..  277629 +  -4.5  -4.71426   GCCCAGTCGACGTCC    AGGTCAGCTCGGAGC GAGCTG GCTCCGAGGAGTCCG     TTTTCTTCCTGCACG  75 414
    trd_0270 NONE
    trd_0271 NONE
    trd_0272 NONE
   trd_A0294 NONE
    trd_0273 NONE
   trd_A0295 NONE
   trd_A0297 NONE
   trd_A0298 NONE
    trd_0274 NONE
    trd_0275 NONE
    trd_0276 NONE
   trd_A0299  285567 ..  285597 +  -8.2  -2.50994   CCTTGGCGGGTTTCC       TCTTGCGCTTGCTC GGC GAGCAGACGCCGGA       ATTCGTGAACTTCGC  52 183
    trd_0279 NONE
   trd_A0303  286010 ..  286040 +  -3.8  -3.33815   ACGGTCTCGGGATCC       GGGTGACTCGTCGC ATC GCGAAGAGTGCCGC       TTGATTGGGACGGCT  49 43
        menB NONE
        menA NONE
    trd_0284 NONE
        menC NONE
   trd_A0307 NONE
    trd_0286 NONE
        menE NONE
    trd_0287 NONE
    trd_0288 NONE
   trd_A0309 NONE
    trd_0289  295463 ..  295479 +  -2.1  -2.56596   CAACCGGCTTGGGAA              GCCGGCA CTC TACCAGC              TGAGTTACTCCCGCG  38 259
    trd_0291 NONE
    trd_0292  296430 ..  296478 + -14.6  -2.70932   ATGAGCGCGCCTGAC TCCAAGCACAGCGGAGGGGGCTCG GTG CAAGCCCCCTCCGC-GAGCT-GAA TGATTGCCCGAAACG  75 27
   trd_A0313  300506 ..  300543 + -11.2  -2.64416   CGACTCGTACCACCA   GGCCGAGTTCGCTGCC CAAGGC GATAGCGCGCTCGGCC    ATTGTGCTGGAGCTC  62 43
   trd_A0315  301787 ..  301799 +  -4.8  -3.18274   GCGTGCGATGACCGA                CGAG ACCAG CTCG                TTCGCTTGCCGTGGA  49 240
   trd_A0316  303189 ..  303199 +  -8.2  -3.04144   CCTGTGCTGAGCAGA                 GCGG TTT CCGC                 TCTTCACGATGGAAC  56 90
    trd_0304 NONE
   trd_A0321 NONE
   trd_A0322 NONE
    trd_0305 NONE
        ppdK  312035 ..  312061 + -10.1  -3.50869   TGGGATGGCTTGGAT         CGCTGGAGCAA ATCCC TTGCACCGGCG         TTCTGTACACTCGTC  69 191
    trd_0307  313527 ..  313540 +  -3.1  -3.61398   AAATGGTATGGTTGG               C-GTGG CCT CCACCG               TTGTTGCGGACAGCG  51 483
    trd_0311  316509 ..  316526 +  -5.5  -3.17763   GAATTGCTCCGTTTT             CTCGCGA AGGC TCGCCAG              TTGCTCGGGTGTCGC  51 106
    trd_0313 NONE
    trd_0314 NONE
    trd_0315 NONE
    trd_0316  322799 ..  322823 +  -4.9  -4.12188   TCGGAGAAGAGCATC          GGCTGCCTACT GAG AGTGGTCATCC          TTTTCCAGGTGGTAC  64 274
    trd_0317 NONE
    trd_0318 NONE
    trd_0319  325323 ..  325343 +  -3.8  -4.09511   ACGAATCACCTCCGC            CCGAGAGC TGCAC GCGCCCGG            TTTTCGGAGGCTGTT  62 281
    trd_0328  331785 ..  331812 + -15.6  -4.07568   GCGATCGGCCCGATC        GACGACGGGGAC GCAA GTCCCCTTCGTC         TTTTACCGGGGGGCA  95 163
   trd_A0345  334772 ..  334804 + -11.3  -2.52543   CAAGTCGAGGAGCGT     CGGGGCGTAGCGCT CCATGA AGCGCT-CGCCCAG      TCCGTTGCGCAAGAT  61 93
   trd_A0346 NONE
   trd_A0347 NONE
    trd_0334 NONE
   trd_A0348 NONE
   trd_A0349 NONE
   trd_A0350 NONE
    trd_0335 NONE
   trd_A0351 NONE
        glpX NONE
   trd_A0353 NONE
         rho  343378 ..  343389 +  -2.2  -2.79796   GACGTCGGACCCGAT                GGTT CGCG AGCC                 TCTCGTGCGCTCACC  40 49
    trd_0338  344040 ..  344068 +  -2.1  -2.81547   GCGACTCGACCCCAG        CCTGCCACTCGCG CAT CTCGGGCGGCTGC        TCCTTGCTATCGCGA  40 249
    trd_0340 NONE
    trd_0342 NONE
   trd_A0356 NONE
        glpK  349258 ..  349274 +  -8.7  -2.79501   TCGAACCCGCGATCT              CCACCTT GAA AGGGTGG              TGTCCTGGGCCTCTA  55 83
    trd_0346 NONE
       coaBC NONE
    trd_0348 NONE
    trd_0349  351768 ..  351788 +  -8.3  -2.78596   GTCAGCGAGCATTCC            TGAACGATC GCG GATCGATCA            TCTGATCGACGGGTA  53 23
    trd_0350 NONE
   trd_A0363 NONE
    trd_0351 NONE
   trd_A0364 NONE
   trd_A0365 NONE
        trpS NONE
   trd_A0367 NONE
   trd_A0368 NONE
        miaB NONE
    trd_0355  358075 ..  358102 +   -17  -4.14511   GCCGCAGATCCGCGA        GCCCTCGTCCCC TCGA GAGGACGAGGGC         TTTTCGCGTCGGGTT  95 48
    trd_0360  362266 ..  362277 +  -3.6  -2.78384   CGGTCGAAGACGCCG                TCCG GGTG CGGG                 TGTGCTCGGCAGAGA  40 90
    trd_0361 NONE
   trd_A0377  363872 ..  363893 +  -7.3   -2.8092   GTGATGTGTCTGCAA           CCGGCGTCGA GTC TCGA-GTCGG           TCTGGTCGAATCTTG  52 332
   trd_A0378 NONE
   trd_A0379 NONE
    trd_0363  365928 ..  365944 +  -2.9  -2.87132   TCGATTTTCCACTCG              GTGCGTG AAG CGTGTAC              TGTATCCGGCGGAAC  41 18
    trd_0364 NONE
   trd_A0382 NONE
    trd_0365 NONE
   trd_A0383  368243 ..  368263 +  -3.2  -2.53876   GCTCACGGTCTCCAG            GTGTCCGT CGCGC ACGGGGAC            TCGATTGCAGTGCGC  39 100
   trd_A0384 NONE
    trd_0367  370333 ..  370359 +   -10  -3.72989   GGGCGCGTCGCGATG         CTGCTCGCGGGC AGC GCGCGCAGGCAG         TTTCGGTATAGCTTT  74 101
   trd_A0387 NONE
   trd_A0388  372846 ..  372869 + -14.6  -2.64616   GCTGGTCGCGGGCTG          GCTGATGGGG TCGG CCCCATCGGC           TCCTGTGACTGCGGC  74 7
   trd_A0389  374380 ..  374392 +  -3.3  -3.14132   CTGCATCCGCGAGAT                CGTGC GAG GCAAG                TTCCTCGCGGAAGCG  43 137
    trd_0372 NONE
   trd_A0390 NONE
    trd_0375 NONE
   trd_A0391  378925 ..  378935 +  -6.8  -2.71364   CGACGCCGAGCTCAG                 GGTC GAT GACC                 TGCTTCAGACGCTCG  48 350
   trd_A0392 NONE
   trd_A0393 NONE
   trd_A0394  381490 ..  381503 +  -9.5  -3.53012   CGTGTGCGCGAAGAT               CGCCG AGCC CGGCG                TTTCCGCCCAGACGA  65 114
   trd_A0395  383553 ..  383610 + -11.3  -4.21439   GCACGTTCCTCCTTA TGGTACGGCTCGGTCAGGAGGCCGCTTC CGC GAA-CTGCTCCTTGACCCAGTCGTACCC TTTCTCTTCGAGTTC  88 268
    trd_0384 NONE
   trd_A0397 NONE
   trd_A0398  387356 ..  387368 +  -9.1  -2.78384   CGACGAGGAGATCGG                CCAGG AAG CCTGG                TGTGATCCGACCCCG  56 359
   trd_A0401 NONE
    trd_0389 NONE
        pfkB  391233 ..  391255 + -10.6  -2.62184   GCGTGTAGATCTGGT           GATCCCAACC GTG GGTTGCGATC           TCGTGTCCGGCCGCG  58 247
   trd_A0403 NONE
   trd_A0404  392689 ..  392705 +  -2.2  -3.93236   ACCGCTGGCATGGCT             G-CGCGG ATCG CTGCGAC              TTTGTCGGATTCCTG  55 85
   trd_A0405  393715 ..  393760 +    -4  -2.62983   AGGATATCGACGAAC TCGACTCGCACCCCGAGCGATC CGAA GATCGTGCGGAG-GAGAGT-GA TAGTCTGACCATACA  41 40
    trd_0393 NONE
   trd_A0406 NONE
    trd_0394 NONE
   trd_A0407 NONE
   trd_A0408 NONE
   trd_A0409 NONE
    trd_0395 NONE
   trd_A0410 NONE
    trd_0396 NONE
        thiD NONE
        thiG NONE
   trd_A0412 NONE
   trd_A0413 NONE
        thiE NONE
        thiE NONE
        thiS  401654 ..  401685 +  -9.4  -2.90723   CCTCCGTTCAGGATC      TCTCGGAGAACTCG TCCT CGGGTTCCCAGAGA       TGTCGTTCGAGATCG  58 87
   trd_A0415 NONE
   trd_A0416 NONE
        secA NONE
    trd_0406 NONE
   trd_A0417  406484 ..  406503 +  -7.2  -3.04461   TGCAGGGATCCCAGG            GATCGCTGC CTT GCAG-GATC            TCTTCGAAGTCCGTG  51 112
   trd_A0418  407871 ..  407887 +  -5.1  -3.53012   ACCTACGTGCATCCG              GATCGCT CCG AGCAATC              TTTCAGCAAGCAGCG  53 163
   trd_A0420  408434 ..  408451 +  -3.3  -4.25104   TGGCGGGGATATCGA             TGCCGTC GACC GGCTGCA              TTTTCATGACACCGC  64 50
        thiI  409896 ..  409949 +  -3.2  -2.52464   CATGCTGAGCCAGCG TCTCGCTCAGCACAGCGAGCTGCT CGCGGGAA ACCGGCTCGCTG-GC-GATCCAGA TCAATTCCACGCGCC  39 237
   trd_A0422  410675 ..  410694 + -13.6  -2.92668   CTGCCGACCCTACCT            CGGTGCTG AACG CAGCACCG             TCTCATTCAATGGTA  75 14
   trd_A0424  411385 ..  411416 +    -5  -3.59979   CGCTCACCGGCACCG      CCGATCCA-CAGCGG CAG CCTCGGCTGGAGCGG      TTTGGGATAGACGCG  55 279
    trd_0416  413977 ..  413991 +  -2.1  -4.38712   TCTCCTGCATCCTTC              GGT-CG AGCC CGCACC               TTTTGTGAGAGTAGC  65 143
    trd_0420  416475 ..  416491 + -13.7   -5.4505   CTCCCCGACTGCGGG              GGCCGGT CGA ACCGGCC              TTTTTTGTTCCAGGC 100 33
   trd_A0431 NONE
        selA NONE
   trd_A0432 NONE
   trd_A0433 NONE
   trd_A0435  421197 ..  421210 +  -2.3  -2.70932   GCACCGTCGCCAGCG               AGAGC ACCC GCTCC                TCGTTCGAGGAGAAG  38 6
   trd_A0437  422354 ..  422393 +  -7.7  -3.69323   AGCAACTCCTGCACG  CTCGGTGCGCGCTCCAG TACCTC CTGCAGCGTGCGCGGTG   TTTCGCTGGTCATGA  65 21
    trd_0425 NONE
    trd_0426 NONE
   trd_A0438 NONE
   trd_A0439 NONE
        uvrC NONE
   trd_A0440 NONE
   trd_A0441 NONE
    trd_0428 NONE
    trd_0429 NONE
    trd_0430 NONE
        ftsH NONE
    trd_0431 NONE
   trd_A0443 NONE
    trd_0432 NONE
         rph  430398 ..  430433 +  -5.2  -3.18264   GTAGTGAAACGAGCC    GCGCCCGCTGAGATCG ACGG CTACCTGGGCGAGCGC     TTCGTCCATCGGCAC  49 296
   trd_A0445  431174 ..  431184 +  -2.4  -2.84051   GATGCGGAGCCCAGC                 GAGC CCG GCCC                 ATTTGCTGAACGTCC  40 23
        fabD NONE
    trd_0436 NONE
        fabF NONE
    trd_0437 NONE
         cmk NONE
    trd_0439  435410 ..  435428 + -10.2  -3.30771   ACATTACCCGTGTCC             GTGCCCGC GGC GCGAGCAC             TTCTGGCACCTCTGA  67 171
   trd_A0451 NONE
    trd_0441  438673 ..  438690 +  -4.1  -2.51173   TCGTCATCGGCCGGT             TCTCGCA GCGC TTCGAGA              CTTGATACGATTCGT  41 3
    trd_0442 NONE
   trd_A0452 NONE
   trd_A0453 NONE
    trd_0443 NONE
    trd_0444 NONE
    trd_0445 NONE
   trd_A0454 NONE
    trd_0446 NONE
   trd_A0455  443393 ..  443406 +  -5.2  -3.90588   TCTGGCGCTGTACCT               CCGG CGTAAT CCGG                TTTCCTTCCCAGGTC  60 17
   trd_A0456  444290 ..  444321 +  -4.2  -3.17075   CTTCTTGAAGCTGGA      TCGCCTCGTCGACC GCGC GGTCTTCGAGACGC       TTGAATTCGGCGGCA  45 42
   trd_A0457 NONE
    trd_0448  446178 ..  446202 + -20.1  -4.19735   AGCCAGTAACGCCGG          CGGGCAGAGGT GTC ACCTCTGCCCG          TTTCGTTTTGCAGCG 100 332
        aroF NONE
   trd_A0459 NONE
   trd_A0460 NONE
    trd_0452  449590 ..  449602 +  -7.7  -2.64099   GGGTAGTAGATCCAC                CCTTC GAT GAAGG                CTTCTGCTGGCAGGG  50 35
    trd_0455  451973 ..  451986 +  -9.5  -2.63715   GGCTGTGCGCCCGTG               CGGGC TTGC GCCCG                TCGTCTGGGATGACT  55 70
    trd_0456  452263 ..  452280 +  -4.7  -2.90901   GGTAGCCCGTGGGTC             CGGGCGG GAGG CCGTGCG              TGTCGTTCGACCTGT  45 50
    trd_0458  452962 ..  452972 +  -6.8  -2.56596   CGGTACGGCGATGAT                 TCCG ATA CGGA                 TGCCTTGCTCGCGGA  47 249
   trd_A0465  454284 ..  454294 +  -2.4  -4.08945   GCCGATCACGGCGGT                 GCGG AAT CCGG                 TTTTGCGCACATAGT  58 246
        recN NONE
    trd_0461 NONE
    trd_0462  458481 ..  458539 + -17.4   -4.1711   GCCCGCCGTCGCGGA CGCGGC--ATGACAGGCGGCGTGGGGGG CTGAT CCCCCCACGCCGCCCGAGATCGGCCGAG TTTATTCGAGGTGCT 100 16
   trd_A0475  464505 ..  464515 +  -4.6  -2.51464   CCCGTTCGCTCATCA                 GCGC TCA GTGC                 GTTGCTGCGTGCTCA  43 16
   trd_A0477  465410 ..  465420 +  -8.2  -3.15999   GCCCAGGCGAAGGTA                 CCGG TAT CCGG                 TTCGGTCTCTGGCGC  57 328
    trd_0472  469208 ..  469237 +  -8.5  -4.56597   AGCGACGAGCGTCGT       GTCGTCGAGAGGG GTGA TCGACTCGACGAC        TTTTTCGAGGAGCGC  84 178
   trd_A0483 NONE
    trd_0476 NONE
    trd_0477 NONE
        rpiA  476750 ..  476798 +  -8.1  -3.09327   GTGTCGGCCCCAACG GCTGCTGCGGCGCAGCGATCCGA ACAGC TTGGACCGC-G-GCCGCGGTCGC TCTTCCCTGAGGTCA  55 96
    trd_0480 NONE
    trd_0481  479020 ..  479034 +  -4.2  -2.66634   TGTGCTGCATGGAAT               AGGGAA TGG TTCCCA               TCGTATGGTCAACTC  42 24
    trd_0482 NONE
    trd_0483 NONE
    trd_0484  482339 ..  482362 +  -2.4  -3.55622   GCTCTATTCTCACTG          TGAGATGACGG GGA CGGTCA-CTCG          TTTGGGGCCGTTCGC  47 208
    trd_0486  483012 ..  483035 +    -3  -2.90723   GACTGACGAGTGGAT          GGCCT-CCGCG CGA CGCGGGAGAAC          TATGCTTACCGCTGA  41 35
   trd_A0493 NONE
    trd_0487 NONE
    trd_0488 NONE
    trd_0489  485662 ..  485686 +  -4.1   -4.7373   GAATGCTTCCTCTCG          CCAGCGGGGCG AAT CGCTTCGGTCG          TTTTTGCTCGCCTGG  78 152
    trd_0490 NONE
   trd_A0496 NONE
    trd_0491  488024 ..  488074 + -12.3  -2.84812   GCTGCCGAGGCCGGC AGCCAGGATGGTGCCGAGCAGTG CGATA CCCAGCGCGGCACCCACCTGGCG TGTCGTGCTCTGGGT  66 352
   trd_A0500 NONE
    trd_0494  490842 ..  490896 +   -28  -3.18274   CTCCTGACATTGGGG CACCGTCCGAGCGCGAGGGAGCTCGT GCA ACGAGCTCCTTCGCGCTCGGACTCTC TTGGCTTCGGATAAC 100 140
   trd_A0501  491638 ..  491650 +  -3.3  -3.72324   CAGGAGGAACTCCCG                GTGCC GGC GGAAC                TTCTTGATGACACTA  54 403
        citZ NONE
    trd_0497 NONE
   trd_A0504 NONE
   trd_A0505 NONE
    trd_0501 NONE
   trd_A0506 NONE
   trd_A0507 NONE
        ribD  499991 ..  500004 +  -4.5  -2.84801   TGCGTCCGATTTGGG               TGCCT GAGG GGGCA                TGATGTTTACCGGTA  43 9
        ribE NONE
   trd_A0510 NONE
    trd_0504 NONE
        ribH  502436 ..  502450 +    -7  -2.71144   CGCTCGAAGCGTGAG               GCTCGC CGA GCGTGC               TGATTCGACGCAGTC  48 27
   trd_A0512 NONE
   trd_A0513 NONE
    trd_0506 NONE
   trd_A0514 NONE
   trd_A0515 NONE
    trd_0510  508647 ..  508668 +  -6.6  -2.92192   GTAGCTCGCCTGGAC           GACCCGGAG GAGCG CTC-GGGTC           TCTGGTTGCGTCGGA  50 190
   trd_A0516  510363 ..  510384 +  -2.9  -3.44051   GTGGCAGGAGGAGTA           ACCGATGCT GAGG AGGATCGGC            TTGTCCTGCTCGCGG  49 156
    trd_0511  510992 ..  511023 +   -26  -4.41548   GGCGCCCACACCAAC      CACCGAGCCGGCCT CATC AGGCCGGCTCGGTG       TTTTCTCGGGTATCC 100 168
    trd_0512 NONE
   trd_A0519 NONE
    trd_0513 NONE
    trd_0514 NONE
    trd_0515 NONE
    trd_0517  514980 ..  515001 +  -5.1  -3.28712   CGTGAGCAAATCGCA           CG-CTGAGCG GTT CGATCAGGCG           TTGTGCCAGCCCCAG  49 151
   trd_A0524 NONE
    trd_0518 NONE
    trd_0519  516729 ..  516753 +  -9.3  -2.62184   TTAGAGGACAGACGA          GGGGCATTC CCTTGAA GGATGCCCC          TCGTGTCGCGACCGC  55 37
   trd_A0528  522504 ..  522514 +  -5.4  -3.28924   TAGACTGGATGTGGC                 TCGT CCG ACGA                 TTCTCGCAGCCGGTG  49 94
   trd_A0529 NONE
   trd_A0531 NONE
    trd_0525 NONE
    trd_0526 NONE
    trd_0527 NONE
    trd_0528  527354 ..  527373 +  -4.2  -2.66634   ATGACGCGCTGAGAT            GCACGAGG CCCT TCTCGTAC             TGGTGTGGTGAAGTC  42 29
    trd_0529 NONE
    trd_0530 NONE
   trd_A0536 NONE
   trd_A0537 NONE
   trd_A0538  531577 ..  531600 +  -6.7  -3.80893   GCGGGAAAGAGCGAG          CTTGGTCGG AAGGTA TCGACCGAG           TTTCCCTTGTCGGAT  62 103
    trd_0536 NONE
   trd_A0539 NONE
        rpsU NONE
   trd_A0540 NONE
    trd_0538  533356 ..  533366 +  -2.4  -3.54741   CCAGCCACCATAATC                 GAGC CAC GCGC                 TTTGCGGACCTGCTG  47 144
    trd_0541  535286 ..  535301 +  -3.2  -2.78384   GCGAGCGCGGAAGAA              GCG-CCG AAC TGGTCGC              TATACTAAGGCCGAG  40 89
    trd_0542 NONE
        argS  538366 ..  538399 +  -5.9  -2.91582   TCGCCTCGGGCGTGG     TCGATTCCG-CGGTCG GAA CGACCGTCGGTACTGG     TGTGTGCATCCCGTG  48 92
   trd_A0543 NONE
   trd_A0544 NONE
         dcd  540623 ..  540636 +  -8.1  -3.39327   GCCGGTTCAAATAGG               CGAGC AGAT GCTCG                TTGTGGATGTCCCCA  58 127
   trd_A0546  542790 ..  542833 +  -7.5  -3.18912   GGACAGGCGGGGAAG CCAGGGTGCGTCACCGGTCATC GAC GCTG-CCAGTG--GCACCCTGG TTGGTCGCTGGGTGC  57 323
   trd_A0550 NONE
   trd_A0551 NONE
   trd_A0552  545760 ..  545788 + -18.9  -3.10164   CCTCCTTTGGTTCGA        CCGACCCGGTGGT GGC AGCACCGGGTCGG        TTCAGTCATCCGTCC  93 49
   trd_A0555 NONE
   trd_A0557 NONE
   trd_A0558 NONE
   trd_A0560  548797 ..  548820 +   -11  -3.46602   GCTGGACAGCGTGAC          GCTGATGGGC GGGG GCGCATCAGC           TTCTGCTGTGGCAAG  72 23
    trd_0555 NONE
    trd_0556 NONE
    trd_0557 NONE
    trd_0558  551764 ..  551788 + -21.5  -4.43642   ACGTGCGACGGTCGA          GGGGCGGTGAG CAA CTCACCGCCCC          TTTCTTCATTATTTT 100 48
        mgtE NONE
    trd_0565 NONE
    trd_0566  564568 ..  564580 +  -3.3  -2.59748   AGCGTTTCCTGATTC                GATCG CTC CGCTC                TCGGTTCTCAGGATG  39 29
    trd_0568  564800 ..  564822 + -11.3  -2.53271   CCGCCCAACCGCGAC          GCGC-GGTCG CGAC CGACCAGCGC           ATATTGTCCAACTGG  62 95
   trd_A0571 NONE
   trd_A0572  566597 ..  566615 +  -2.2  -3.05844   ATCCAGAGCTGAAAG             GAGGTACG TTT CGCGCCAC             TGTTCGGGTAGCCGG  42 16
   trd_A0573 NONE
   trd_A0576  572370 ..  572402 +  -3.2  -3.02511   TGGGTCGGGGCGAGG     CGCGACCGCTCGGCG CGAA CGC-GGGCGAGCGCC      TCTTGGCGACGTGGC  42 453
   trd_A0578  572970 ..  572980 +  -2.4  -3.15663   AAGACGTGGCGATCA                 GCAC GCA GCGC                 TTCCTCGGCCTCGAT  42 14
   trd_A0579  573575 ..  573606 +    -8  -4.56597   GGACGTCGTCGGAAG      GC-AAGAGGAGCTCG CGG TGGGCTCCTCTCCGC      TTTTTCGGCACGGAA  81 279
    trd_0576 NONE
    trd_0577 NONE
    trd_0578 NONE
   trd_A0582 NONE
   trd_A0584 NONE
    trd_0579 NONE
    trd_0580  579414 ..  579432 +  -2.3   -2.7169   CTTTTGCCGTGTGGT             CGCCTTC GTCGA GGAAGCG             TGATCTCGTCTTTGC  38 4
    trd_0581 NONE
    trd_0582  581305 ..  581324 +  -3.4  -2.81072   ATCGACTAGGTCACC            CGCTCGGT TGGC GCCGGACG             ATTGTCTTCCATAGC  41 32
    trd_0586 NONE
    trd_0587  585510 ..  585520 +  -2.4  -5.72207   GCGCGCAGCCGGCAC                 AGCG TTT CGCG                 TTTTTTTGCTTTCAC 100 156
   trd_A0596  587003 ..  587023 +  -6.7  -3.29511   GGGGCGGATCTTCCG            CACGAGCAC AGC GCGCTCGGG            TTCTCACCGCATCAC  54 52
    trd_0592  587325 ..  587349 +  -5.5  -2.75074   GAATATGCGGACGTT          GGGGGTGTCGC AAT GCGTCGCCTAC          TCCTGTTCGGGTGCC  46 75
    trd_0594  587840 ..  587869 + -16.5  -2.71593   GCCTTCCCACAGTAC       GGGTGGCCAGC GCTTTCCA GCTGGCCACCC        TAAGTTTGTCGCTCT  81 109
        nadC NONE
   trd_A0598 NONE
        nadA NONE
   trd_A0599 NONE
   trd_A0601  592817 ..  592840 +  -5.3  -2.62184   GCCAGATCTCTCCGC          TCGTCGG-CT GCTCG AGACCGGCGA          TCATGTCGAGAAGCG  43 25
    trd_0600 NONE
   trd_A0602  594071 ..  594085 +    -7  -2.52676   GTGCGATCAGTGGTT               GGCTCG GGG CGCGCC               TCGGTTGCACGCATC  47 16
    trd_0601 NONE
        cbiQ NONE
   trd_A0604  595959 ..  595972 +  -2.3  -3.34398   TCGAGTTCGCTGGTC               CCGGA GAGC TCCAG                TGTTTCGACAGGAAA  45 252
         ggt  598142 ..  598155 +  -5.9  -3.10715   TGACTTGGGCGATCT               GGCGT GCGA GCGCC                TTCGCTGCTGGTAAG  49 142
    trd_0607  600272 ..  600293 + -12.3  -3.55444   TCGTGCTGCGCTAAA           GTGTCGAGC GCGT GCTCGACGC            TTTCCGGCGTGACGA  75 176
   trd_A0609 NONE
   trd_A0610 NONE
   trd_A0611 NONE
   trd_A0612 NONE
        proS  604390 ..  604414 + -10.8  -3.21099   CCCCTCCACATGCCA         G-ATGCAGGGC CGAA GCCCTGCATAC          TTACTGGTACGCCCG  65 524
    trd_0614 NONE
   trd_A0615 NONE
    trd_0615 NONE
   trd_A0616 NONE
   trd_A0617 NONE
    trd_0616 NONE
   trd_A0618 NONE
    trd_0617 NONE
    trd_0619 NONE
   trd_A0621 NONE
    trd_0622  612962 ..  612974 +  -3.4  -3.34013   GTCAATTCGGTTCGT                CTTC CCCCA GAAG                TTCCTTGAGGCGGTC  47 109
   trd_A0623  613574 ..  613602 +  -7.3  -3.39449   TGACTCGTCCGCCCG        GCCCGATCACTTC GCC GATCTGTTCGGGC        TTGATCTTGATCCGC  58 172
   trd_A0627  618501 ..  618521 +  -7.6  -3.67597   GACGGGAATCTGTGT           C-CGTTCGG CGAA CCGAACGAG            TTCTTCGGTGGCACC  63 208
    trd_0628  619860 ..  619876 +    -5   -3.5594   TGCCTCGGCATCCTT              GCGGGC AAGGC GCCCGA              TTTCGCGCGTCAGTT  55 371
    trd_0630  620810 ..  620833 +    -3  -2.52676   GCGGATCAGGTCGAC          AACGGGGACG ATCC TGTCCCGGTA           TCGATTGCCGGGGTG  39 75
    trd_0632  621689 ..  621699 +  -3.2  -4.31379   GCCACCCGTTCGAGC                 TGTG ACC CACG                 TTTTCCTCCATTCGT  64 148
   trd_A0632 NONE
    trd_0634 NONE
    trd_0635 NONE
   trd_A0634 NONE
        ruvA NONE
   trd_A0635 NONE
   trd_A0636 NONE
   trd_A0637 NONE
   trd_A0638  629472 ..  629489 +  -9.9  -3.55563   CCACGTCTGCGACGC             CGATCCT CGGC AGGATCG              TTTCGAGAATGCCCT  65 111
         eno  634020 ..  634046 + -12.3  -2.87132   GGACACGCCGGTCAG         CTAGCCCTGCA CGTCT TGCGGGGCTGG         TATGTGACCGCACAG  66 83
        ilvD  637546 ..  637575 + -19.4    -3.745   GATCGTGAAACGAGT       GGTGGGGCTGAG ACTACA CTCAGCCCCACC        TGTTTTGCTAGATCG 100 41
   trd_A0657 NONE
   trd_A0658  649555 ..  649577 +  -4.1  -3.21912   TAGTAGTTCATCACT          GCCGTGATGA AGAC TCG-CGCGGC           TTGGTGCGTTCGCCA  47 201
   trd_A0660 NONE
   trd_A0661 NONE
   trd_A0662  653422 ..  653454 +  -8.4  -3.14344   CGATGGGTACACGAA     GACCTCAGCCGCGCT ATAG AGCGCGGGA-AGGTC      TTCCTCCGCGACGTG  57 284
   trd_A0664  654828 ..  654844 +  -4.3  -2.88861   GGCCTCCGGTGCCAG              CGGGCGA GAA TCGTCGG              TGTATCCCAGTACTG  43 221
   trd_A0665 NONE
   trd_A0666 NONE
   trd_A0668  659155 ..  659171 +  -4.3   -4.1822   ATTTCCTTGAACTTC              TCCTCGG CGT CCGGTGA              TTTGTTGACGTCAGG  62 17
   trd_A0669  661052 ..  661062 +  -3.2  -4.26351   GGCAGTCGCTCGGAC                 TCTC CCA GAGG                 TTTCTTCAATTGGTC  64 336
   trd_A0670 NONE
    trd_0667 NONE
   trd_A0671 NONE
   trd_A0672 NONE
   trd_A0673 NONE
    trd_0668 NONE
    trd_0669 NONE
   trd_A0674  666699 ..  666726 +    -7  -4.07568   CCGTTATTGACCGCC        TTGAAGGCGGCGC GCA GCG-CGACTTCAG        TTTTGCCGAAACCGA  68 489
   trd_A0676  668690 ..  668707 +  -8.3  -3.03007   ACCAAACGCCCCAAT             CCCGGCC ACCG GGCGGGG              TGTTCGAGGCATCTT  56 146
    trd_0671 NONE
    trd_0672 NONE
    trd_0674 NONE
    trd_0675 NONE
   trd_A0679 NONE
         tuf NONE
        rpmG NONE
    trd_0678  672534 ..  672558 + -12.2  -4.67943   CTGGATCGAGCGGAA         GGGGCTGAGCA GGGC TGCTC-GCCCC          TTTTGTCTGTTCCCG 100 67
    trd_0679 NONE
        nusG NONE
        rplK NONE
        thiO NONE
        rplA  674851 ..  674883 + -15.6  -3.53224   GAAACCGCAGTCGCA     CGTG-CCCCCTGCGT TCCG ACGCAGGGGGTCTCG      TTTCGAGAGGAGGTG  90 133
    trd_0683 NONE
        rplL  675882 ..  675921 + -21.4  -2.87468   CGAGATCAAGTAGCG  ACGACGGGCCGGGACGCT CACT GGCGTCCCGGCCCGTCCC   TATGCTATACTGGCA 100 28
    trd_0685  676026 ..  676046 + -18.3  -3.28712   CGCCCCGACTGACTG            GGCCGCACC ATG GGTGCGGCC            TTCTCGCACGAGGGA  93 32
    trd_0686  676751 ..  676778 +  -2.6  -2.61274   TCATTTTCTCTCGTT        GCAGGTCGCTCAC GGT GTGGGAGACG-GC        GTTGGTTGCACTGAC  38 86
   trd_A0694  683440 ..  683457 + -10.5  -3.31144   ACGACCGTCACGAAG             TCGGCGG GTAC CCGCCGG              TTGTAAAGGTCGAGC  67 182
   trd_A0695 NONE
    trd_0695 NONE
   trd_A0696 NONE
   trd_A0697  688605 ..  688623 +    -3    -3.224   CAGGCCGAGTTCGTC             GAAGAGCA GGG TGCTCAAC             TGTTGTGGCGAGTTG  45 104
   trd_A0699  690402 ..  690412 +  -8.2  -3.32647   CAGGATCAGAGCTCG                 GCGG CGG CCGC                 TTGCTATAATTCGCA  60 25
   trd_A0700 NONE
    trd_0701 NONE
   trd_A0701 NONE
    trd_0702 NONE
   trd_A0702 NONE
   trd_A0704 NONE
    trd_0703 NONE
   trd_A0705 NONE
    trd_0704 NONE
   trd_A0706  697189 ..  697207 +  -2.3  -3.26947   CTACGGCGTCGAGAG             GGTCGGT GACCG ACCGGAC             TTCATCTGGAAGTTC  44 32
        nagA NONE
   trd_A0708 NONE
        anmK NONE
   trd_A0710 NONE
   trd_A0711  703001 ..  703030 + -11.5  -3.72027   CCACGACCATTCTAC       CCTGGATCGTGAT TGCT GTCACGATTCGGG        TTCTTCATGCGCAGT  77 116
        acsA NONE
   trd_A0715 NONE
    trd_0712  706947 ..  706965 +  -4.4  -3.65353   GGCCAGTCGTCGGTG             ACGCGGTG GAT CACGGCGA             TTTCGGCTAGTTTGG  53 244
   trd_A0717  709230 ..  709257 + -11.2  -2.83822   CGAGTATGAGGGGAC        CCCGACGCGGGA AGCT TACCGGGTCGGG         TGGTTGTGGCGTGAG  64 56
    trd_0715  710427 ..  710458 + -15.2  -3.75115   GCGATCCATGGTTCG      TATTCCCCCTGGGA TCGG TCCCAGGGGGAACG       TTCGTTTTGTGAGGG  89 60
    trd_0717  712161 ..  712180 +  -4.2  -3.06312   CCCAGCAGTCGGCGC            GGC-TACCG AGC CGGGATGCC            TTGCATAAACCGTTT  45 519
        alaS NONE
    trd_0727  720520 ..  720541 +  -2.1  -3.05384   TCGGCCCGCAAGACC           CGGCCTGGC AGAC GTCGGATCG            TTGCGTGGGCAGAGG  42 122
    trd_0728 NONE
    trd_0729 NONE
   trd_A0730 NONE
    trd_0731 NONE
   trd_A0732  723084 ..  723132 +  -7.6  -4.09685   CTTTCTGAAATCTTT GGAG-CGAGCCGGTCGACCGCTA CCGGTA TCGCGGTC-ACTGG-TCGCCTCC TTTTCGAGCGTACCG  71 173
   trd_A0733 NONE
    trd_0734 NONE
   trd_A0734  724301 ..  724347 +  -9.5  -3.57462   AGCGTGCACGCATGA TCCTCAGGC-CTGAGCG-TGCTC CGA GAGGAGCGCTCGGCGCTGGAGGA TTTCGCGCTGGAGTA  68 312
   trd_A0735 NONE
    trd_0736 NONE
    trd_0737 NONE
   trd_A0737 NONE
   trd_A0738 NONE
   trd_A0739 NONE
    trd_0738  729625 ..  729643 +  -6.7  -2.62396   GGGTGCTTTGGCGAA            CGCAACGC AGGA GCGT-GCG             TAATGTCCAAAGATC  47 370
   trd_A0744  733689 ..  733724 +  -4.7  -3.28924   GTTTGGCGTGCTCGC   CGGAATACGCCCAGCTC GCTT GAGCACGGCG-AT-CCG    TTCTCGGGCCAGGTC  49 249
    trd_0744  734315 ..  734349 +  -6.2  -3.62046   AGGAAGGGTATACTT     CGAGCGGATCGCGCCG ACG CGGTGCGAGGTGTGCG     TTCTTGCGCGGCTGG  57 92
        purB NONE
   trd_A0748 NONE
   trd_A0749 NONE
        purC NONE
        purS NONE
   trd_A0750 NONE
        purQ NONE
   trd_A0752 NONE
        purL NONE
        purF NONE
   trd_A0754 NONE
   trd_A0756 NONE
   trd_A0757 NONE
        gcvT NONE
   trd_A0758 NONE
        gcvH NONE
   trd_A0759 NONE
   trd_A0760 NONE
   trd_A0761 NONE
   trd_A0762 NONE
    trd_0753  744559 ..  744586 + -16.4  -4.65895   TGGGGCACAATGGAA        CCCGAGCA-CTCG GTG CGAGGTGCTCGGG        TTTTTGCGTAGGGGA 100 61
        engA NONE
         soj NONE
   trd_A0765 NONE
        glyA NONE
   trd_A0766 NONE
    trd_0756 NONE
    trd_0758  749149 ..  749172 +  -3.8  -2.55074   AGCGCTGCGTCGCGT          CCG-GCAGCTC AGC GAGGTGCATGG          TCACTTCGAGTTCGG  41 228
    trd_0760 NONE
    trd_0762  752230 ..  752242 +  -3.3  -2.78384   GAGTTGGCGCGCCTC                CTCGA TCG TCGTG                TCTGGTGGCGGCAGA  40 57
    trd_0764 NONE
    trd_0765 NONE
    trd_0766  754640 ..  754650 +  -3.2  -3.62354   AACGATGAACGCAAG                 TGGT CCA ACCG                 TGTTTCGTTTCGAGC  51 221
    trd_0767  756176 ..  756192 +  -4.3  -3.71848   CCCCGCCCTGCTGGA              CGAGTCG CCG TGCCTCG              TTGTTACTGCGGGCG  56 164
        accC  761598 ..  761613 +  -5.4  -3.78597   TGACCCCGATCGCGG              GCCGAT TCGG ATTGGC               TTTGAGTTCGTGCAT  58 141
    trd_0776 NONE
    trd_0777 NONE
   trd_A0782 NONE
         gap NONE
   trd_A0783 NONE
        panB NONE
         pgk NONE
        panC NONE
        tpiA NONE
        secG NONE
   trd_A0786 NONE
    trd_0782 NONE
    trd_0783 NONE
         lgt  771405 ..  771431 +  -5.1  -3.20435   TTCGGCGACGAACGG         GTCGTCGTTCA GGACA TGCGCGATGAC         TTGGTGCATGCTTCG  49 135
    trd_0785  772135 ..  772147 +  -4.7  -3.53012   AGTTTGGGATCGAAC                CGCCG GGA CGGGG                TTTGGGACAGCGAGA  53 268
    trd_0787 NONE
        lepB NONE
    trd_0789 NONE
    trd_0790  774663 ..  774685 +  -4.2  -3.61398   CCAATGATGGACAAC           GAAGATTG TGGAGAT CGATCTTC           TTGTTGACGGCGCGG  53 122
    trd_0792 NONE
   trd_A0791 NONE
    trd_0793 NONE
   trd_A0792  778174 ..  778195 +  -5.1  -2.61264   CTGCCGCGTGAATGG           TCG-GCTTGC TAT GCAGGCGCGG           GTTGTCAGTAAACAC  43 10
    trd_0795 NONE
   trd_A0793 NONE
    trd_0796 NONE
   trd_A0794 NONE
    trd_0797 NONE
    trd_0798 NONE
   trd_A0795 NONE
   trd_A0796 NONE
    trd_0800 NONE
        ruvC NONE
    trd_0802 NONE
   trd_A0798  785063 ..  785097 +  -6.3   -2.9155   TCGCCGGACTCGTCT    CCGTTCCGGTGATCGG CCTG CCGA-CTCCGGTAGGG     TATGGTGTTGGGGGG  48 446
   trd_A0799 NONE
   trd_A0800  786232 ..  786256 +  -3.5  -3.96148   CTCACTGGCTCACCA          ACATGCGTTTC GAT GAAGCGAATGA          TTTCTGATAGCGGCG  58 331
        cofD NONE
   trd_A0802 NONE
   trd_A0803 NONE
   trd_A0804 NONE
    trd_0809 NONE
   trd_A0805 NONE
         tgt NONE
    trd_0812 NONE
   trd_A0806 NONE
   trd_A0807 NONE
    trd_0813 NONE
        acpS NONE
   trd_A0809 NONE
    trd_0815 NONE
    trd_0816 NONE
   trd_A0810  796439 ..  796458 +  -6.4  -4.19704   CGATCGGGCTCGCTC            GGAGCTCT TCGA GGAGTTCC             TTTTCGCTCAGATTG  68 80
   trd_A0812  799635 ..  799646 +  -3.6  -3.19192   CCAGCGGGATCGTGG                GCGG AAAC CTGC                 TTCGATTCGCTCGAG  45 207
   trd_A0816 NONE
   trd_A0818 NONE
   trd_A0819 NONE
   trd_A0820 NONE
    trd_0825 NONE
   trd_A0821 NONE
    trd_0826  809813 ..  809827 + -11.4  -3.17723   CTACCATGGGGTGTG               CCACGC CGA GCGTGG               TTGAGTTGGGAATGG  68 60
        infC NONE
        rpmI NONE
        rplT  810994 ..  811021 +  -8.4  -2.62024   TCAGCTGGTCGAGGT        TGCCCGTCG-CGC TCT GTGACGACGGTCA        TCAGTTCTCGTCATC  53 7
    trd_0830 NONE
    trd_0831  812328 ..  812344 +  -5.1  -3.05521   CTTGCGCGGTGGGAC              AGCTGAT CCC ATCAGCA              TGTTGAACGTCTCAT  47 156
   trd_A0831 NONE
   trd_A0832  818578 ..  818596 +    -3  -2.60496   AGGTACTTGCCGAGA             AGAAGCGA GAA TCGCTGCC             GTATTTCGGGGGAAA  39 59
   trd_A0833  819040 ..  819061 +  -2.1  -2.78384   AACGGCTCATCCAGC           GTGACATGG ACAA CCAGGCCGC            TCTCATCGAAAAACG  38 27
    trd_0838 NONE
   trd_A0834 NONE
   trd_A0835 NONE
    trd_0839 NONE
    trd_0840 NONE
   trd_A0837 NONE
    trd_0841 NONE
    trd_0842 NONE
    trd_0843 NONE
    trd_0845 NONE
   trd_A0843  828263 ..  828274 +  -2.2  -3.35679   CGATGAGCAGAAGTC                GTGA TCCA TCGC                 TTGTCCATGCCAAGG  45 224
   trd_A0844  829597 ..  829621 +  -2.7  -3.06312   GAACACCCAAGAAAC          GAGGCTTGCGA GAA TGGCGGCCCTC          TTGAATACCCGGTTT  42 34
    trd_0847 NONE
   trd_A0847 NONE
        mviN  832891 ..  832903 +  -2.6  -3.65046   CTTGATCGGTGACAT                TGCC GCGGA GGCG                TTGTTCGGGTACCGA  50 29
   trd_A0851 NONE
        lepA NONE
         dcd NONE
    trd_0852 NONE
        aspS NONE
   trd_A0855  839067 ..  839094 +  -4.2  -3.28791   ACGTTCTGCCCCGCG        GTCATG-CTGG CCCCCTT CCAGTCGTGAC        TTCTCCACGCAACGT  47 337
    trd_0856 NONE
    trd_0857 NONE
    trd_0858  840136 ..  840155 +  -9.2   -5.0916   GGCACTAGAACAGTA            ACCGGCTC AGAT GAGCCGGC             TTTTTCTATTGAACG 100 34
    trd_0860 NONE
   trd_A0859 NONE
    trd_0861 NONE
    trd_0862 NONE
   trd_A0860 NONE
        purM NONE
    trd_0864  844979 ..  844991 +  -4.7  -2.53263   GTTGGAGCATACTAA                CCCCC GGA GGGAG                TCGCTTCGCGATGCG  43 47
    trd_0865 NONE
   trd_A0865 NONE
        purH NONE
        argG  848290 ..  848300 +  -6.8  -3.21276   GGATAACTGATGACC                 CCAG CCA CTGG                 TGTTCTCCGACGGCG  54 400
   trd_A0870 NONE
        aroE NONE
    trd_0871 NONE
    trd_0872 NONE
   trd_A0872 NONE
    trd_0873  853741 ..  853762 +  -2.3  -2.90227   CATCGAGTGATCGTG           CCAAAATCTC TTT GCG-TTTTGG           ATTTCATCCTTGCAG  40 31
        lysS  855584 ..  855601 +  -5.5  -3.22091   GTGCACCCGCGGAAC             CAGGAGA TTGT TCTCCAG              TTGCTGAATTACGAT  51 205
   trd_A0877 NONE
   trd_A0878  861830 ..  861867 +  -8.3  -2.94218   CAGCATCGAAGATCC   GCACGATCGCCTGCTCGC TCT GCGTGCCGCTGATCG-GC   TGTGTGATAGCCAGT  56 6
   trd_A0879  863039 ..  863064 +  -2.6  -3.75738   CCATCACGCATGACG         GCGAT-ACGAT CGGAC ATCGTCAACGC         TTCTTCCTGGTCATG  53 250
    trd_0883 NONE
   trd_A0882 NONE
    trd_0885  867359 ..  867375 +  -6.5  -3.23452   CCACGCCCGGTACCA              GCAGATC GGC GAGCTGC              TTCAGTTCTGGCGGT  54 90
   trd_A0885  867951 ..  867972 +  -5.8  -3.31144   GAGCAAGGCTCGGCG           GGCGACTG GATGGA CGGTTGCC            TTCTCAGGATCAGCG  53 79
   trd_A0887 NONE
    trd_0886 NONE
   trd_A0889  870264 ..  870293 +  -4.1  -2.92255   CGTGGCGACCAGATC       GCGCGTACC-CCCG TGA CGGCCGGTTCACGC       TCTCGTATCTCTTCC  44 91
    trd_0889  872558 ..  872571 +  -2.4  -2.80344   CGACTCATACAGGAA               CAGA ACGTAA TCTG                ATTCTTCGATCGGAA  40 11
    trd_0890  872921 ..  872931 +  -6.8  -2.72344   GTCGCGTCACTGTCG                 TCGC TGC GCGA                 TCATTGAACGTCGAG  48 57
   trd_A0894 NONE
    trd_0894 NONE
    trd_0895  877044 ..  877068 + -17.2   -3.1506   GCGATCTGCCGATCC          CCGGGAAGCG CTCAT CGCTTCCCGG          TTCCTGAACGCATTT  88 105
    trd_0897  877616 ..  877640 +  -4.1  -2.78384   GAAGACCGAACACCC          CCGCTAGCCGA GAC TCGACCAGCGA          TATGGTGCACAACAC  42 116
    trd_0898  878393 ..  878403 +  -6.8  -2.90075   CGGGGATGGCATCTG                 GTGG TGC CCAC                 TGTGGTTCGACAGGA  49 275
    trd_0899 NONE
         fhs NONE
   trd_A0898 NONE
    trd_0901  882476 ..  882506 + -12.5  -4.55295   CGGGCAAGTCACAGA       ATCCCCTGGGCCG ATTCG TGGCCCAGGGGGC       TTTCTTTCTGCCGGA 100 52
    trd_0902 NONE
    trd_0903 NONE
   trd_A0901 NONE
    trd_0904 NONE
   trd_A0903 NONE
    trd_0905 NONE
   trd_A0905 NONE
    trd_0906  887784 ..  887820 + -23.1  -4.60797   CGCAAAATCGACCTA    CCTGCGGAGGGTGAAGC CTG GCTCCATCCTCCGCAGG    TTTTCTCTATCGACC 100 48
    trd_0907  889760 ..  889772 +  -3.3  -2.57931   GCCGACGAGACGGAC                ACGAG CCA CTCGC                CTTCTGACCGCTACG  39 54
    trd_0908 NONE
        pepF NONE
    trd_0911  892575 ..  892592 +  -2.6  -5.22006   TCTGACACCAGAACA             GCTCGC TGCACT GCGAGA              TTTTTGTTGTCATGG  83 104
    trd_0912 NONE
   trd_A0912 NONE
    trd_0913 NONE
   trd_A0914 NONE
    trd_0915 NONE
         gmd  896904 ..  896922 +  -5.9  -3.59979   TGACGGGCAAATCCG             GAGAGCG CAAAT CGCTCGC             TTTGGCCTGGCCCGA  57 233
   trd_A0917  899151 ..  899163 +  -3.3  -3.14132   CCCCGCATTGCAGAC                GATCG CCC CGTTC                TTCATCACGAGAAAG  43 250
   trd_A0919 NONE
   trd_A0920 NONE
   trd_A0921 NONE
   trd_A0922 NONE
   trd_A0923 NONE
   trd_A0924 NONE
         mdh NONE
   trd_A0925 NONE
    trd_0923 NONE
   trd_A0926 NONE
   trd_A0927 NONE
    trd_0924 NONE
    trd_0925 NONE
    trd_0926 NONE
   trd_A0928 NONE
   trd_A0929 NONE
    trd_0927 NONE
   trd_A0930 NONE
    trd_0928 NONE
    trd_0929 NONE
   trd_A0931 NONE
   trd_A0932 NONE
    trd_0930 NONE
   trd_A0933 NONE
    trd_0931 NONE
    trd_0932 NONE
   trd_A0934 NONE
    trd_0933 NONE
    trd_0934 NONE
        hpaD  915379 ..  915405 +  -2.9  -3.22298   AGTGGGTCGGGGAAC        CTCGGCGGCTGC TGGC GC-GATGCTGAG         TTGCTGATCACTCAG  45 250
    trd_0939  916833 ..  916857 +  -6.4  -3.30635   GCCCGAACCCGCGAC          TCGTCTGAGA GGGCA TCTCAGCCGG          TTGTCGCGCCCTTTC  55 471
    trd_0941 NONE
    trd_0942  919161 ..  919173 +  -6.9  -2.53263   TCGTTGGCTTCGCCC                TCGGC ACA GCCGG                TGGATTAGGGGTGGG  47 101
    trd_0948  924072 ..  924106 + -14.4  -3.57808   ACGCTTCCGTACCAG    GGCGACCCCGCTCCTG CGATC CAGG--CGGGGTCGCC    TGTTTCTCCGTTCGG  84 50
    trd_0950 NONE
    trd_0951  927842 ..  927852 +  -3.2  -2.75769   TGACCCGGAGCAGCC                 TTCC GAT GGAG                 ATTCTCGTTTCGACA  40 98
    trd_0952  928699 ..  928721 +  -9.1  -3.59979   CCACCAACGAGAAGA           CGCTGAGGT TGCTC ACCCCAGCG           TTTCCCGTCACCGAC  68 20
    trd_0992 NONE
    trd_0993  959557 ..  959568 +  -2.2  -3.09635   TGCCATTTGGCGCCA                G-GCG TAT CGCTC                TTCCATACTGCCAGT  42 302
    trd_0995 NONE
    trd_0996 NONE
    trd_0997  961838 ..  961852 +  -3.4  -2.83012   GGACGAAACACGTAC               CTGGAC CGC GCCCGG               TGTGCTGGTAAGGTT  41 85
        rpsB  962830 ..  962855 + -10.3  -3.91897   CACTCTGCAGTGAGG         GAGGCCGGCAC GGGC GTGCCGGCCCG          TTTGTGCCTGACGAG  75 42
         tsf NONE
        pyrH NONE
         frr NONE
        uppS NONE
        cdsA NONE
         dxr  967777 ..  967787 +  -4.6  -3.08173   TCCGACTTGAGAAGC                 CGTG TCT CGCG                 TTCGCTGGAGTTGAT  47 235
    trd_1008  971017 ..  971061 + -11.3  -3.10715   CAGTTCCTGCGCGCG TTGCCTCCGGCGCAAGCGCAT CTG ATTCGCCTGCGCCCGAAGCAC TTGGCTGATGCTGAC  66 171
    trd_1022  985900 ..  985945 +  -5.9  -2.94747   CGAATCGACAGCGAA ACATGAGCGAGCGGGGCTGGTC GTT GTCC-GCCCCGCTCGTAGAAGG TCTGTGATCGACTCG  48 20
    trd_1027  993274 ..  993286 +  -4.7  -2.83715   AGATTGTCGCGCGAG                ACGCG TGT CGCGA                TGTCGTACTCCTGGC  45 283
    trd_1030 NONE
    trd_1039 NONE
    trd_1040 1011302 .. 1011345 + -29.8  -3.03619   CGATTGAGCACCGCA CGAGCGGAGAAGGGACGGTC GATC GACCGTCCCTTCTCCGCTCC TCTTCACGACTGATT 100 34
    trd_1050 1020828 .. 1020841 +  -2.4  -2.65774   AGGCACAGTCCGACT               GATG ACCCCC CATC                GTTGTCGTCGCTATC  38 24
    trd_1051 1022406 .. 1022419 +  -8.1  -3.04144   AGACACCGAGACTGA               CGAGC GAAA GCTCG                TATTGGACATGCAGC  54 163
    trd_1054 1024599 .. 1024618 +  -7.2  -3.15407   ACGCTCCTGATCGAA            GTAGGTGAG GTC CTCACC-AC            TGTATTCCTGATGTC  51 482
    trd_1057 1029376 .. 1029390 +  -2.1  -3.53224   CGCAGTCAGGCATCC               TTCAG GCATA CTGGA               TTTAAGCGAAGAATC  47 64
        ispG NONE
    trd_1059 NONE
    trd_1061 1033132 .. 1033143 +  -7.2  -3.04461   CCCCGCAGCCAGCGC                GCGC TCGA GCGC                 TGTTCCCAGTCCGTA  51 411
    trd_1062 1036880 .. 1036892 +  -3.4  -3.62597   CCATCTGCGCACCAC                GAAG ACCAA CTTC                TTCTTGAACCGTGAC  51 493
        fusA 1039821 .. 1039852 + -22.4  -3.35679   TGGAATCACGAGGAA      TCTGGGAGCTGGGC ACCG GCCCAGCTCCCAGG       TTGTCGATGAGGGGA 100 51
    trd_1065 1040489 .. 1040503 +  -4.2  -3.02144   GGCGGTCGGTAACTG               GACTGC GGA GCAATC               TCTTGCACGGAGTAA  44 213
    trd_1066 1040624 .. 1040652 + -20.4  -2.81208   TACTACCGCCCACTC        CGTACCCCTCGC CGCAA GCGAGGGGTACG        CTCTTTTCGGTCACG 100 28
        thrS 1043240 .. 1043256 + -10.1   -2.6563   ACAATTGCTGTGACT              TGCGACC ACC GGTCGCG              TCGATTCTTCCAGCA  58 426
    trd_1071 1046986 .. 1047004 +  -5.8  -3.02144   GAGCACTTCTTGCTC             GGCTGCGG CGA CCGCCACC             TCTTCCACGAGATGG  48 161
    trd_1077 NONE
    trd_1079 1052823 .. 1052868 +  -7.5  -2.78816   CCAGCCTTCTCGATC AGCTGGATACGGTCGATCG TCATACCC CGGTCGACCGCCTTCAGCA TGTCGTAGACCGTCA  52 83
    trd_1081 NONE
    trd_1082 1056550 .. 1056567 +  -5.5  -3.14468   TGTGATCGCCACCAC             GCCG-CGT TGT GCGACGGC             TTCGATCTCGTCACG  49 320
    trd_1090 NONE
    trd_1091 1065201 .. 1065229 +  -4.6  -2.60392   CAAGTGGAGTGTCCG       CCGCACGATG-TG CCGC CAGTATCGTTCGG        GTTGCTTCGCCCATC  43 377
        ileS NONE
    trd_1094 1071324 .. 1071337 +  -4.5  -3.14881   CACAGCAGGTGCTGC               TCTGC GACA GCGGA                TTCGTCGGCACGTTC  45 83
    trd_1095 NONE
    trd_1096 1073833 .. 1073858 +  -2.5  -3.71848   GCTTCACGGCTTTCC         CACCGCT-CG ACCCAAA CGTAGCGGAG         TTCTTCGTCGAGGCG  53 216
        murI 1075302 .. 1075313 +  -3.6   -3.6543   CAGCGAACTGGCTCA                CCGT CCAC GCGG                 TCTTTTGGAACGTTC  51 348
    trd_1099 1075913 .. 1075924 +  -5.8   -2.8474   CCACCACGACCAGAC                GTCG AGCC CGAC                 TCCTTCTCCCTGAGG  47 1
    trd_1100 NONE
    trd_1101 NONE
    trd_1102 1078997 .. 1079013 +  -2.2  -3.61517   GCACTAACCCTTCCC              GCTCGA AGATC TCGAGA              TTCTTCAGCGCGGCT  50 440
    trd_1104 1080748 .. 1080795 +  -2.1  -3.39187   GTAACGCGCTCGCTG CCGATCCTCGTGGC-GCACTGA TTCGCGC TC-GAGCAGCTGC-AGGATCGG TTCATCTTCGCTGTT  45 37
    trd_1105 1085449 .. 1085478 + -23.6  -3.18383   CATCCCATGCCACAA       CCGGCCCCCGGG AGCATC CCCGGGGGCCGG        TTGGTGGGTGGGGAT 100 50
    trd_1110 1089170 .. 1089200 +  -5.4  -2.70932   AAGTACTCCACCACT      GCACGAGCGATCG CCAAAC CG-TCGTACGTGC       TCGTTCCCCGACCGA  44 455
    trd_1111 1091627 .. 1091641 +   -10  -3.12999   CGGTCATTCGACTCT               CGAGGA ACC TCCTCG               TTACGTATAACCTGA  63 86
    trd_1112 NONE
    trd_1113 1094150 .. 1094181 + -25.2   -3.6502   GAAATCACCGGTCGC      GCCGGGGCCCAGGC GCGC GCTTGGGCCCCGGC       TTTCCGTCCCGGATC 100 42
    trd_1115 1094593 .. 1094609 +  -4.3  -2.87468   GGCCAAGGCATGATG              GCGAGCT GGT GGCTCGA              TCTCGTATGCTGCCA  43 138
    trd_1117 NONE
    trd_1118 NONE
    trd_1119 NONE
    trd_1126 1112816 .. 1112827 +  -5.8  -4.13995   CGAGCAGCTCGGCAA                TCGC TTCC GCGA                 TTTGGTTTGTCAAAC  66 221
    trd_1131 1117559 .. 1117569 +  -2.4  -2.62184   CCGCGAGCACTCGAC                 CTGG TGC CCCG                 TGCTCTCCCAAACGA  38 133
    trd_1132 1118459 .. 1118486 + -21.4  -3.32022   GGTCGAATCGTGCAA        CAGCGCTCGGTG CCTG CACCGAGCGCTG         TTCGTCTCTCGAAAG 100 58
    trd_1133 NONE
    trd_1134 1120281 .. 1120326 + -16.7  -3.59202   GAGTCAGTCGGATTC CGCGAACGGACGCGCGCCTCG TTGC TGCGGCGCGCGTCCGTCCCAG TTCTGTCTGGCGCTG  91 76
    trd_1139 NONE
    trd_1140 1127676 .. 1127691 +  -6.1  -2.71364   CGGCCGGTTCGGCTA              TCCGG CAGTCT CCGGA               TAGTTGGGAGGGTAG  46 107
    trd_1141 NONE
         gnd NONE
         zwf 1133032 .. 1133049 +  -3.3  -2.97747   TCCCTAGTCACCTTT             CGACCCG GAGG TGCGTCG              TGTCTACTGTCCCCC  42 34
    trd_1144 NONE
         pgl 1135387 .. 1135406 +  -5.6  -3.82824   CGATCACTGCTTCGC            CGGCGATC AGGA GCTCGTCG             TTGTTCTCGCTCGTG  62 411
    trd_1147 NONE
    trd_1148 NONE
    trd_1149 1138768 .. 1138782 +  -2.7  -3.08679   TGTGAGGGAGTGATC               GCGCG ATGCA CGCAC               TCTTGGCTCAAGCGC  42 28
    trd_1150 1139736 .. 1139750 +  -2.8  -3.53012   CACGCGGAGATCCTC               GTCC TTCGGGT GGAC               TTTCCAAAGCAGGCC  49 266
    trd_1154 NONE
    trd_1155 1143568 .. 1143578 +  -8.2  -3.82824   CGGGTCGCTTCCTCT                 GCCG CCT CGGC                 TTCTTCTGCCTCCTC  69 162
    trd_1158 1146955 .. 1146997 + -12.5  -2.71731   TCGCACGGCGTCGAA GAGCGAGCCGGGGTACAGG GTCGG CCAAAGCCCCGGCTCGCAC TCCTTCCCGACTCAG  65 52
    trd_1159 NONE
    trd_1160 NONE
    trd_1161 NONE
    trd_1162 NONE
    trd_1163 NONE
        ispH NONE
    trd_1165 NONE
    trd_1167 1157912 .. 1157933 +  -7.2  -3.22298   AGAGTCGCGCCCGAA           CGGCGAGC ACGTCC GCTCGCAG            TTGCTCATCGCTCCG  54 72
    trd_1168 NONE
    trd_1169 NONE
    trd_1170 1161895 .. 1161907 +  -7.7  -2.73875   GCCCTCGCAAAGGAG                TCGGT GGT ACCGA                TGCTGTTGCCGAACC  51 253
    trd_1171 NONE
    trd_1172 NONE
    trd_1173 NONE
    trd_1174 1165661 .. 1165691 + -22.6  -2.92026   TGACGCGACCGAACG       GGAGCGCCCCGCCA CTC TGGCGGGGCGCTCG       TCTCGTGTTCGGCTG 100 46
    trd_1175 1166786 .. 1166808 +  -4.1  -4.03078   ACAAAGGCACATCGA          CCGTCATCGG CTCG CCGA-GACGC           TTTGTGATCTCGTGC  60 424
    trd_1177 NONE
        glmM 1169551 .. 1169583 +    -7  -2.64472   AGAGGTGTTGTCTGT     CGTTCGCC-GAGC-CG CTG CGAGCTGAGGCGAGCG     TGCGTTTCCCGGCTG  47 1
    trd_1179 NONE
    trd_1180 1170826 .. 1170838 +  -7.7  -2.79302   GAACCAGATACCTCA                CTGAC GAG GTCAG                TGTCCTGACAGTCGT  52 5
    trd_1181 1171166 .. 1171176 +  -5.4  -3.06261   CTCCTCCCCGAACGA                 CGAA GAG TTCG                 TCTTGCAGGTTGACC  47 93
    trd_1184 NONE
        purD 1175945 .. 1175980 +  -7.6  -2.73221   CCAGAATGACATCCA    CG-CGATCCTGAGCG CCGAGCT TGCGCAGGATCGACG    TCATGTGATTCTTCA  51 68
    trd_1193 1181754 .. 1181782 +  -5.2  -2.92389   GCCTGGCCCAGCCTC       CTGAGAAGGAGCG GCAT CGCTCCGGC-CAG        TGTGTCGATGCCTTC  46 44
    trd_1196 NONE
    trd_1198 1186489 .. 1186521 +  -4.8  -3.28712   GCCCCAAGAGGACTA     GGCTTCG-CGCACGGG CAA TCCG-GCGACGAGCCC     TTGTAAAGAAGCAAC  49 25
    trd_1199 1188405 .. 1188436 + -12.3  -3.19602   GCAGGACGAAAGCAG      GGCGTCCGGAG CGTGAGCGTC CTCCGGGCGCC       TCTTCATCTCGAGCG  71 54
    trd_1200 1189044 .. 1189080 +  -9.5  -3.16683   TCGCGAAGGCAGGCA   TGCCGCGAGGCCCAGGT GAGGG ACC-G-GCCTTGCGGCG   TTCGTCCAGTCGCGT  60 62
    trd_1204 NONE
    trd_1205 1194316 .. 1194334 +    -3  -3.14132   ATGAGTGCGAGTTCC             TGATCGCG TTG CGAGGTCG             TTGATCGGAAGGGAA  43 23
    trd_1206 NONE
    trd_1207 NONE
    trd_1208 NONE
    trd_1209 NONE
    trd_1210 NONE
    trd_1211 NONE
    trd_1212 NONE
    trd_1213 NONE
    trd_1214 NONE
    trd_1215 1205178 .. 1205221 +  -9.4  -2.78384   CAGCCGACAAGATCA GCACATGACCCGAGCGACCC CCAA GGATCGCTCGGGTCACTCCC TGTGCTCGCACGACG  56 72
    trd_1239 1224963 .. 1225007 +  -8.3  -2.87132   CACGTGCTTGATCGT CCGGTGCACGAGCCGGCGCAA AGC TCGGGCCTGCTCGTCCTCCGC TGTGTCGACCGGCAC  55 504
    trd_1243 1229379 .. 1229390 +  -7.2  -3.62096   CGACCAGAAAGACGA                CCGG TGTG CCGG                 TTTGCAGTGCTCGGC  59 300
        accD NONE
        accA 1247861 .. 1247871 +  -2.4  -3.03159   ATCGCTCACCCCGTA                 GCCC ATA GGCC                 TGTTCCAAGAGTTCG  41 426
        pyrB 1250432 .. 1250462 +  -7.6  -4.56775   GCCGACTGGACTCCT      GA-TGC-CCCGCCC AGCGC GGGCGGGTGCGCTC      TTTTTCCCAGCAGCT  81 49
    trd_1266 1254305 .. 1254324 +  -4.9  -2.78384   ACTCCACGAGCCAAC            GCCGACC GACCCA GGTCGAC             TATACTCGGAGCAGG  44 46
    trd_1267 NONE
    trd_1268 1256848 .. 1256859 +  -5.8  -3.59979   GCCGAGTTCATCGAC                GAGC CCGA GCTC                 TTTCGCCTGGCGCCC  57 253
    trd_1271 NONE
    trd_1272 NONE
    trd_1273 1263504 .. 1263521 +  -4.1  -3.29324   TCGCTCTCAGTGAAT             CGTAAGC GTCC GGTTACG              TTCCGTTTACATCGC  47 21
    trd_1274 NONE
    trd_1275 1265772 .. 1265797 + -20.5  -3.00704   CCTTCTCACTCCGCC         CGGGGAGGAGG GTTC CCTCCTCCCCG          TCTCGTTTGCCGGAT 100 52
         dxs NONE
        gidB NONE
    trd_1278 1270101 .. 1270116 +  -3.2  -2.52543   CCGGTTCCCAGTGTG              CGACGA AGAC TGGTCG               TGCCTTGACAGCGCT  39 191
    trd_1279 NONE
    trd_1280 NONE
    trd_1281 1273991 .. 1274026 + -19.8  -4.25104   CGAGCGATCGCTGCG    AGCCTCGTGAGCGCCA CGTC TGGTGCTCACGAGGCA     TTTTGCTGAAGGGAG 100 43
    trd_1282 NONE
    trd_1284 1276402 .. 1276457 + -10.3  -3.01712   ACGAGTTCGGCGAGC GAGGTGGCGATTCTCTCCGGGCGACG CAAGT CG-CGCGCGGGGAAAGCCGGCGCCTC TCTTGCCAGGAGAAC  62 440
    trd_1285 NONE
    trd_1286 1279386 .. 1279403 +  -5.5  -2.62184   TCGAGAGACAGTACG             GAGGCTC AGCC GGGTCTC              TCCTCTCGCGAGCAG  45 81
    trd_1287 1279545 .. 1279572 + -21.4  -2.86071   TCCGAGGGTACTGGG        GAGCGAGCAGGG AAAT CCCTGCTCGCTC         GTTGTTCGTGTGGCA 100 29
    trd_1288 1281096 .. 1281112 +  -2.2  -3.59979   CGAATCAGGTGACGA              GCCG CAAAGAGAC CGGC              TTTCCCATCGCCACG  50 295
    trd_1292 NONE
    trd_1293 1285195 .. 1285225 + -16.3  -2.71011   GTATGCGCCACGGAG      C-AGTGCCCCGTTC GAAC GAACGGGGCACTCG       TCATTCGAGGACCGT  81 30
    trd_1303 1295051 .. 1295067 +    -5  -3.18264   CGAAATAGGCTTGCG              CGACGG ATGCA CCGCCG              TTGGTCCCTGCCCCA  49 219
        selD NONE
        ksgA NONE
        ispE 1298808 .. 1298846 +  -2.9  -3.37056   TCGCTGCTGCTCGAC   CCAGCCGACGACTCGCA AAGGC TGCCCGACCTCGACTGG   TTGTCGGTACGTGAT  47 203
    trd_1309 1300456 .. 1300493 + -11.3  -3.89346   ATCCCGACGGGAAAA  CC-AGACGGGGCCGGGC ATGACC GCCCGGCCC-GTCGCGG   TTTATGCACTCGAAC  79 51
    trd_1313 NONE
    trd_1314 1305072 .. 1305098 + -10.9  -3.05844   ACCTCGTCAGGGACG         CCGGATCGGTA ACCGG TACCGGTTCGG         TATTGCCCTCCCCCC  66 14
    trd_1315 1306944 .. 1306987 +  -7.5  -3.06492   CAGCAGACTGACATG TGACGCCGGCT-GAATGG CAACCGTCT CCAGTCCAGCCGGCTTCA TGTTCGCCTCACTCA  55 30
    trd_1322 1313770 .. 1313787 +  -3.4  -3.21099   GCCACGCCGTCCGTA             CAGCTC CTTGAC GAGTTG              TTCGTGATAGACGGC  45 112
    trd_1328 NONE
    trd_1330 1320809 .. 1320821 +  -6.9   -3.7282   GGATCGGCACGAGCC                GGTCC TGT GGGCC                TTCTTCCTCCACTAG  62 291
         ggt NONE
    trd_1332 NONE
    trd_1333 NONE
    trd_1334 NONE
    trd_1335 NONE
    trd_1337 1327518 .. 1327568 + -11.8  -3.07113   TAACCGAAACAGCAC CGTCGGC-CAGTCTGCTTGGCGC CAGAGC GCGCCGAGCAAGCAGCGCTGGCG TTGCATCCGGTCGTA  69 305
    trd_1338 1330224 .. 1330241 +  -3.3  -3.84422   GCGAGCGGGAACCGG             GTGGCTC GTCG GAACCGC              GTTTTTTGTCTCTCA  56 414
    trd_1341 1333537 .. 1333548 +  -3.6  -2.78384   TGCGTTCCCGATCGA                CCCG GCAA TGGG                 TATGATGCAGCCGAC  40 47
    trd_1342 NONE
    trd_1343 NONE
    trd_1344 1337214 .. 1337231 +  -8.4  -3.60627   GCCTCGATCTGCGGC             CCGAGC CCGCTC GCTCGG              TTTCCGGTGAAGTCG  65 399
    trd_1346 1339547 .. 1339589 + -22.1  -3.06796   CTGTAGGCAGCCGCT C-CTGACTGCCCGAGCCGGG CCAC TCCGGCGCGGGCAGTCAGCG TTGAGTCAGGTAGCG 100 21
    trd_1353 NONE
    trd_1354 1347660 .. 1347681 +  -6.5  -3.72576   CATCGGCCAGCTCAC           CGGCGAGTCG GAG CG-CTCGCGG           TTTGATCGCACCGAC  62 410
    trd_1362 NONE
    trd_1363 NONE
    trd_1365 1353654 .. 1353666 +  -6.9  -2.66316   TAGACGGCTCCCTGC                TGGCG CAT CGCCG                TGATCTCATCCGACG  48 38
    trd_1368 1356239 .. 1356281 +  -3.3  -2.71011   CCGGCTGCTGGTCGA CACGCCGCGTCG-TCAACTCG ATC CG-GTACAGCGACGAGGCGAG TCCTTGCAGGACCGT  40 524
    trd_1369 NONE
    trd_1370 NONE
    trd_1371 NONE
    trd_1372 NONE
    trd_1374 1365248 .. 1365260 +  -7.7  -2.68434   GCGTAATGCGGCTCG                GATCG TGT CGATC                TGCTCTGGTGTCAAC  51 289
    trd_1382 1372059 .. 1372075 +  -2.1  -3.71848   GCCCGAGATGTTCGG              GTGCGCG CGC CGGGAAC              TTGTTGGTCACCCAC  53 381
    trd_1385 NONE
    trd_1386 1378443 .. 1378453 +  -2.4  -3.82824   CGATTCCCTCGGTCG                 CGAC CTC GCCG                 TTCTTGTGGATGATC  55 243
    trd_1395 NONE
    trd_1396 NONE
    trd_1397 1388380 .. 1388424 + -16.4  -3.46647   CTCTCGTTCTAGTCC CTGGGTGCGGGTGACGCTCG CCCAT CGAGCGTCACCCGCAGTGCG TATTTGGTACCTGAA  91 29
    trd_1398 NONE
    trd_1399 NONE
    trd_1400 NONE
    trd_1401 1391935 .. 1391953 +  -5.8  -4.14739   GCGTCGAAGCGTGAC             CGCGTCCG TTT CGGCCGAG             TTTTGGCCTGCCTCG  66 27
    trd_1402 NONE
    trd_1403 1394746 .. 1394767 +  -2.3  -3.57039   GCTCGGGCCACTGAA           CTCCCTGC CGAGAAC GCAG-GAG           TTCTGGTTCTCACTG  50 104
    trd_1404 NONE
    trd_1405 NONE
    trd_1406 1398408 .. 1398432 +  -6.3  -2.80816   CCTCCCTCCTCCACC          ACCGAGGACGG TCA CCGTGTTCGGC          TATCCTGAATCGCCC  47 45
    trd_1407 1400025 .. 1400061 + -15.8  -3.14564   GAGATGCACCACACA    CACGAGCGGGGAGCGG CACGA CTGCTCCCCGCTCGCC    TTCGTCGGGCACTGC  82 39
    trd_1411 1405601 .. 1405619 +  -4.5  -3.15544   ACGCGCGGATGGAGC             GATGAGC CAGAC GCGCATC             TTCGTCGACCTCCCC  45 43
    trd_1412 NONE
    trd_1413 1408597 .. 1408614 +  -9.1  -2.98015   CGAGGACGCTACTCT             CCGCGCCG ATT CGGC-CGG             TCTCTCGTCCTTCCC  59 103
    trd_1416 1411685 .. 1411737 + -11.4  -2.60723   ACGGCAAGAGACGCA GC-CCGCC-GTTCG-CGAACTCGGC CCGCGT GCCGAGTTCGGCACACAGGCGGCGC ATTCGTTCGCACTGG  62 68
    trd_1420 1415640 .. 1415666 +  -6.4  -2.53876   AAAACTGCCCCCATC         GGCCCCCTTG ACAAGCC CCCGGGGGCC         TCGCTTACACTCGCC  47 70
    trd_1421 1417229 .. 1417282 + -23.1  -2.57795   AGTGAGTGCGCGTCA CGCATCCTGACGGAGCGGGCGGGGA GAGT TCCCCGCCCGCTCCGACGTGATCGG TGGCTTGATCGTCCA 100 36
        argF 1422423 .. 1422436 +  -5.9  -3.41878   CGAGCTATTGAGCGA               TGCCG GCCC CGGCG                TTCTCCGTTGAGCGC  53 1
    trd_1430 1422841 .. 1422851 +  -6.8  -3.12351   GCTCTGTCCATCAGC                 GAGG CAG CCTC                 TTCCCTCTGACCGGC  51 5
    trd_1433 1424991 .. 1425014 + -13.1   -3.4072   CCACGCACGAGAAAA          GCCCGGGCG TCGAGC TGCCCGGGC           TTGTCCTGCCGCGTG  77 61
    trd_1435 1427010 .. 1427031 +  -5.7  -2.78384   CACGATCCTGCCACA           GCCGGAGCA TGGC TGGACCGGC            TATACTCAACAGAAA  46 80
    trd_1436 NONE
    trd_1437 NONE
        guaB 1430714 .. 1430745 + -23.8  -2.72049   CACGCACGACGCGGA      GCGGGGGTCGTCGG TCGA CTGACGACCCCCGC       TCGTTGCCCGCTGTC 100 52
    trd_1440 1432896 .. 1432918 + -11.3  -2.58544   GTGCGCCGCGTCATC           GATCGGGCG TTCAT CGCCTGATC           CTTGTCACGCTGGCC  62 5
    trd_1441 NONE
    trd_1442 NONE
    trd_1443 1434665 .. 1434678 +  -2.3  -2.52464   TCGCCAAGACGGCCC               GGGTG CGAG CAGCC                TGAATTCACCGGAAG  37 9
    trd_1444 NONE
    trd_1446 1435622 .. 1435635 +  -5.2  -3.56092   AGAGCTGGCTGTGCA               CCGG TCGGCT CCGG                TTTCGCACATCGTCG  55 173
    trd_1447 NONE
    trd_1448 NONE
    trd_1449 1438154 .. 1438167 +  -2.3  -3.17212   GCACCGATCCGCATG               CGCCG CACA TGGTG                TTCCTCGGCTCGTCG  42 105
    trd_1451 1440238 .. 1440259 +  -7.1  -3.02144   ATCCACTCCGCCAAC           GCGCGCCCG ATCG CGGGAGCGG            TCTTGAACGACGTGC  50 125
    trd_1452 1442291 .. 1442301 +  -4.6  -3.31983   GCTGCCTGCGAAGAG                 GGCG TCT TGCC                 TTGCTATACTCTGTA  51 406
        dnaJ 1443632 .. 1443660 + -16.7  -3.17075   GCCAGGTCAGCAGAA        CGCCCTGCCTCGG CGA TCGAGACAGGGCG        TTCCGTTCACGAGCC  85 160
    trd_1463 1451565 .. 1451609 +  -5.7   -2.5007   TCCTTCGGCTTTTGG CCCGGTGAGG-CGATGGTGA GCGCGG TCATCTTCGACCTCGATGGG GTCTTGATCGATTCC  45 18
    trd_1464 1452565 .. 1452577 +  -7.7  -3.14132   CGCCGTAAGAAGCAG                CATCG CGC CGATG                TTCATGAACCCGAGC  55 354
    trd_1473 NONE
    trd_1474 NONE
    trd_1475 NONE
    trd_1476 1463825 .. 1463857 + -22.1  -2.81133   GCGCCTCGGCGTGCA      CCCCTCCGCTCGACA GGA TGTGGAGCGGAGGGG      TGTCGTGCCTCGCTC 100 61
    trd_1482 1467824 .. 1467839 +    -9  -4.18018   CACCGCTCGACGAGT              GTAGCG AGGG CGCTAC               TTTTCCATCACACGC  72 22
    trd_1483 1468702 .. 1468757 + -14.6   -2.7898   GGAGTTCGCCCTTCT GGA-AACGTGGAGCGAGCCGGCGATCG CGG TGAGCGCCGGCCCGCTCCACGGGGTAC TCGTTCGATGTTCCC  77 48
    trd_1484 1469270 .. 1469291 +  -5.1  -2.50113   CCGCTGTTCCTCGGA           GGATTGACG GATG CGTCAACTC            GTTCGTGCGCTGCTC  43 19
    trd_1485 NONE
    trd_1486 NONE
    trd_1488 1471204 .. 1471218 +  -2.1  -2.90496   CTGTCGCCACGAGTG              TCGCGC GAAT GC-CGA               TCGTTTCCGCCGCGA  40 139
    trd_1490 1472961 .. 1472976 +  -2.4  -3.01712   TCGCCAGTGCCAGCG              TCACCG AGCG CGGCGG               TGTTGCAAAAACCCC  41 247
    trd_1491 NONE
    trd_1492 NONE
    trd_1493 NONE
    trd_1494 NONE
    trd_1495 1478896 .. 1478910 +  -3.5  -3.65046   TCCTCCAGGAAGGCG              CGCAGG ACGA CC-GCG               TTGTTGCGCTCCGGG  51 48
    trd_1501 NONE
    trd_1502 1483633 .. 1483647 +  -4.9  -2.62396   CAGGCGCTGGCCATC               GCGCG TTCGC TGCGC               TGATGTCGACCACTC  43 8
    trd_1503 NONE
    trd_1504 NONE
    trd_1506 1486353 .. 1486378 +  -8.9  -3.14931   TGGATCTCCTCGCTG         GTGACCGCCCG AATG CGGGCGATGAC          TTCCTCAGGCGTCAG  57 134
    trd_1513 1495604 .. 1495621 +  -4.8  -3.75169   CCATGACGCCGAAAC             TGCGCA GGACGA TGCGCG              TTTGCTCGCCTGGTC  58 433
    trd_1523 1504664 .. 1504678 +  -2.1  -2.94099   CGAGCCGAGCGAGGG              TGCTCG ATGA CG-GCA               TATATCGTGCGGCGA  41 77
    trd_1524 NONE
    trd_1525 1506578 .. 1506602 +  -4.1  -3.46512   AATCGTCTCTGCTGA          GCGCAGGCCGA GTT TCTGCATGCAC          TGTTGTCTTCCTTCT  51 72
    trd_1526 1507768 .. 1507785 +  -5.5  -2.78547   ATCCCGACATCGGCC             TGGGCCA GCGC TGGCGCA              TCGTTGATACCGTCG  46 468
        metG 1512625 .. 1512654 +  -4.1  -3.62046   AGCCACGAAGAGATC       AGGGTCGCTGGTC GGTC GTTCAGCGAGCCA        TTGTTGGACGGCTCC  53 389
    trd_1532 1515176 .. 1515201 +  -3.9  -2.87132   AGGGGAGCCCCTGAA         CGC-GCTCGATA CTG TGGCGGGCGGCG         TCTCTCCGCCGCCCG  43 27
    trd_1533 1515597 .. 1515607 +  -3.2  -2.52516   GATGCGTCGGGATCT                 TCTC GGG GGGA                 GTTCGTCGTGAGCCG  39 4
    trd_1534 1516090 .. 1516109 +  -4.2  -2.62983   AAGCGCTCCCTTGAA            TGGCGATC GGGC GATCGCGG             TGCTCTACCGCTGAA  41 27
    trd_1535 NONE
    trd_1536 1518269 .. 1518288 +  -6.3  -3.09492   TCCGGCGATCCGGCC            GAGCGGC TCGAGC GCCGCGC             TGTTGGCATTCGGGA  49 272
    trd_1538 NONE
    trd_1539 1521712 .. 1521740 + -15.4  -2.57564   GCGGAGGATACCGCG       CGCTTGCGCGAGC ACCT GCTCGCG-AAGCG        ATTCTGGGCGGATCA  77 345
    trd_1541 NONE
    trd_1542 NONE
    trd_1544 1525448 .. 1525464 +  -2.1  -4.36914   CCAAGAAGAGGCGTG              CCAGGGC GAG GCGCTGC              TTTTCTCCACCAGAG  65 309
    trd_1547 NONE
        uvrB NONE
    trd_1553 1535831 .. 1535854 + -15.3  -3.11162   TCGAAGAGGCATGGG          CCGGCAGCC ACGTTC GGCTGCCGG           TATACTTTCTTCGGT  80 53
    trd_1555 1536004 .. 1536022 + -10.2  -2.88822   AAACCTGCGCTCGCC             GGGCGCTC GTC GAGCGACC             TCGTTGTCTCCACCG  60 53
    trd_1556 1536483 .. 1536518 + -20.4  -3.11569   TCGCGCGTGTGGATG    AAGAGCGACGCCCCGG CAAG CCGGGGCGTCGCTCGA     GTTTTCCGTCAATAG 100 48
    trd_1559 1543264 .. 1543284 +  -8.1  -2.78384   CTTCCAGGCGGTCGA            GCGCTCGGG CGA CCCGCTCGC            TGTCCTGCCGCGCCC  51 191
         lon 1547549 .. 1547597 +  -5.2  -3.66874   CGCAACGACGCGTAA CCGAACGGGCGGGCTGCCGAGA GCGCCTG TCTCGCC-GCCCGCCTAC-CGG TTTCGCTAGGATTGC  55 26
    trd_1563 NONE
    trd_1565 1550905 .. 1550935 +  -6.6  -2.71144   CCCAGTCTGCTCCAG       GAGTTCGCGCGCCG CTG CGTCGAGCGCACGC       TCGTTCGGCAAAATC  48 307
    trd_1570 1554453 .. 1554474 +  -5.7  -4.11216   CGACTGGCGGATCCT           GCCCTAGCG ATCG CGCTCCGGC            TTTTGCCGCTCACGC  66 19
    trd_1572 1557804 .. 1557838 +   -15  -3.76224   CCGAGCGGAACGATC    GC-GCGAGCCGGCTC CCCACC GAGCCGGCGCGCTGC     TTTCCTCACTGGACA  89 50
    trd_1576 1561432 .. 1561445 +  -3.7  -2.55999   TGGACACGGTGAACA               GGCAC CGGA GCGCC                ATTCCTCTCGGCTGG  41 121
    trd_1577 NONE
    trd_1578 NONE
    trd_1579 NONE
    trd_1580 NONE
    trd_1582 1568420 .. 1568430 +  -8.2  -2.57132   GGTATGTACCAGCGC                 CCCG TGA CGGG                 CTTGTCACCCCGGCG  53 490
    trd_1587 NONE
    trd_1590 1581185 .. 1581197 +  -4.7  -3.06796   GGGACGTCGCTCGAG                CGCGG CTG CGGCG                TTCCCTGGGGTCGGG  47 512
    trd_1592 NONE
    trd_1593 1584012 .. 1584032 +  -5.4  -3.13403   CCGTCAGTGAGCGGC           GCGCCATGC GTGG GCA-GGTGC            TCTTGGTCACCGGCG  47 31
    trd_1594 NONE
    trd_1595 NONE
    trd_1596 NONE
    trd_1601 NONE
    trd_1602 1595354 .. 1595364 +  -6.8  -2.87468   CGAGCAGCTCGGCCG                 GCAG GAT CTGC                 TCTGATCTCGTGCCG  49 10
        topA NONE
        hslV NONE
        hslU NONE
    trd_1606 NONE
    trd_1607 1601405 .. 1601417 +  -3.3  -2.77043   GCTAGCGAGCATGCG                GGAGC CGA GATCC                GTTTGCCCTGATCCG  40 2
    trd_1609 1603238 .. 1603253 + -11.8  -3.35679   CCGGGGCAGCTGAAG              GCGCGC CATC GCGCGC               TTCTCGGTCGAGCCG  73 28
        ilvE 1604574 .. 1604588 +  -5.6  -4.08216   GCGTCGTGGCGAGTG               CCGGTG ACA TGCCGG               TTTTCAGCACGATCG  66 217
    trd_1612 NONE
    trd_1613 1609322 .. 1609343 +  -5.8  -2.78384   ATCGTGGATGTCGAT           CCGGTGAG CTTGCT CTGACCGG            TATAATCGAGAGCCA  46 8
         def 1610186 .. 1610211 +    -4  -3.53091   GGCACGAGCCGCCGG         ATCGACGCTGC TCCCT GCA-CGTCGAC         TTTGACGACCACCGT  51 297
    trd_1616 1612851 .. 1612866 +  -3.2  -4.41494   TACGAAGGGCAGAGC              ACGGTA CAGG TACCGC               TTTTCCTTCCGCGTC  66 428
    trd_1626 NONE
        ilvE NONE
    trd_1628 1623509 .. 1623521 +  -3.3  -3.31144   TGGATGTAAGGAGGC                GCGAT GGA ACCGC                TTCTCGAGGTACGCG  47 214
    trd_1629 NONE
    trd_1630 NONE
    trd_1631 NONE
        scpA NONE
        scpB 1627758 .. 1627815 +  -2.4  -3.85698   ACCCCTACAAGACGG GGGGTCGCGCACCGCCGATGTGTGGT TGGTAC ACGCCAGGACGGTGATGGACGACCCC TTTGTCGGGGCGAGG  55 285
        prfB NONE
    trd_1637 1632839 .. 1632863 +  -2.7  -3.51825   CTTTCTCGCGCCGCG          ACCTTGACACG ATT CGTAGCAAGGC          TTATCCTTGCCGTAG  47 55
        hrcA NONE
        grpE NONE
        dnaK 1636694 .. 1636713 +  -6.4  -2.62263   CGGACGATGCTGTCG            CCACC-GTG TGA CGCCGGTGG            TGGTCTGCCAGCCCT  47 193
    trd_1641 NONE
    trd_1642 1640297 .. 1640315 +  -2.4  -3.38046   TCAGGGCCGCAGTGA            GCGGAGT GTCAGG AC-CCGC             TGTTTCCACTCGAAC  45 440
    trd_1644 1643684 .. 1643694 +  -3.2  -3.36694   TCCATAGCGGACCGT                 TCCT TCG AGGG                 TGTTTCGCGGTCGGT  47 222
    trd_1645 NONE
    trd_1646 NONE
    trd_1647 NONE
    trd_1648 1646840 .. 1646858 +  -4.5  -2.87132   GCTATGCGGCGCAAT             GGTGCTG GGCCG CACCACC             TGTGTCGGGGCGGGG  43 384
    trd_1649 1648386 .. 1648401 +  -4.6  -3.28712   CTCTCGCCGATCGGG              GATGGG TCGT CCCACC               TTGTCGGGGCGAGGC  49 339
    trd_1650 1649485 .. 1649510 +  -4.6  -3.18274   CCCGCGACTGGTTCC         G-GCGCCGGGG AACTA CTCCGGCACGC         TTCCCTTCGGATGCG  49 367
    trd_1651 1649707 .. 1649727 +  -6.8  -3.32993   TCGAGTAGCTCGTGT           TC-GCCGGG GCAA CCCGGCAGG            TTCGTGTGTCCGTAC  55 33
    trd_1655 NONE
    trd_1657 1655314 .. 1655333 +  -4.2  -2.71364   GGATTGCCGAGCGGG            C-CGGTCGG CTG CGGACCGAG            TCGTTCACCCGATAC  42 254
    trd_1658 NONE
    trd_1660 1657972 .. 1657997 +  -5.9  -2.72344   CGCGAACGCCGGCAC         GCAGCGCGCGG AGCG CCTCGCGCGGA          TCGTTCACGGTCCAC  46 135
    trd_1665 1663067 .. 1663086 +  -3.4  -3.67296   CCGTAGGCCGGTTGA            GCGACCAG TTGC CAGATCGC             TTTCGCTAGATCGTC  51 244
    trd_1666 NONE
    trd_1667 NONE
    trd_1669 1666959 .. 1666974 +  -5.4  -3.21099   AAAGCTCGAGCACCA              GCGGCTC CAA GAGC-GC              TTGCTGCTCGACACC  49 417
    trd_1670 1670014 .. 1670029 +    -9  -3.01791   CACATGCAACGTCGA              TCGGCA GCGC TGCCGA               TCTTCCACCGGAAGT  56 168
    trd_1671 NONE
    trd_1672 NONE
    trd_1673 1673802 .. 1673840 + -16.8  -2.87211   CGACTACCGGCCGCA   GGCTGCTGCGCCTGCT CTCGCTC AGCACGCGCAGTAGCC   TGTATCGCCGCCCCT  84 42
    trd_1674 NONE
    trd_1675 NONE
    trd_1676 NONE
    trd_1677 NONE
    trd_1678 1681340 .. 1681372 +  -6.9  -2.52464   CTCGAGTCAAAGCGC     CCCGAGCGAGCGGC CACCGA GCCGCT-GCGCGGA      TCGGTTCGCGAGAAG  47 62
    trd_1679 1681904 .. 1681953 +  -6.9  -2.56715   ACTGGTAAACGACTG GAGCGCCAGTCGCTCTGCAGAGC GCCC GGACTGCAGAGGGGAAAGCGCTC TCCCTTCGTCACGGT  47 45
    trd_1681 NONE
        accB NONE
    trd_1683 NONE
    trd_1684 NONE
    trd_1685 1688937 .. 1688956 +  -9.2   -3.6215   TGCTCGTCGCTGAAT            CGAGCGAG ACAT CCCGCTCG             TTTGCCGTCCGTTGC  68 468
    trd_1686 1689569 .. 1689607 +  -3.1  -3.14344   ACCTCCTCCCGCACT  CGCGCCAG-CGATGGCGAG TCG CTCGCGATCGACTC-CGAG  TTGCTCGGCGCGCTC  43 510
    trd_1689 1692250 .. 1692273 +  -9.5  -3.07935   GCTCGGAATGTGCCA          CCGGCCTCC CGCACA GGAAGCCGG           TTCCATGAATCCAGT  60 498
        leuA NONE
        leuC 1695177 .. 1695198 +  -2.1  -2.89742   AAGCGAGGAGGGCAG           TTCCCGTGC CGAT GCGTGGGCG            TGTCTGGAAGTTCGG  40 95
        leuD NONE
        leuB 1696899 .. 1696926 + -18.4  -2.66274   CATGAGCGTATTCGT        CCGCCCCCCGTG CATG CACGAGGGGCGG         CTTCGTTCTCCGACA  87 106
    trd_1694 NONE
    trd_1695 NONE
        aroQ NONE
    trd_1697 1701851 .. 1701868 +  -3.3   -2.7224   GGGAGGAACCGTGTA             CCCATCC GGAA GGGTGAG              TCGTATCTCGTATAC  40 41
         efp NONE
        accB NONE
        xseA NONE
        xseB 1704928 .. 1704966 + -10.9  -3.14132   CCTGTAGGGGCGACG  CGTGTGTCAGCCGCGGCG CCAT CGGCGCGGCA-ACACCCG   TTCGTGGCAGGCGAC  66 446
    trd_1702 1705660 .. 1705674 +  -3.5  -3.33162   GAGACCAGGAAAGAT               CGGTC AGCAC GATCG               TTCTGACCTCAGCTG  47 5
    trd_1703 1707767 .. 1707808 + -21.6  -3.53012   GAGCGCCTGCCACGA CCACACGGGCCGGCCGAG AGCGCG CTCCGCCGGCCCGTGTCG  TTTGGCACGACCGCA 100 47
    trd_1704 1708681 .. 1708722 + -28.1  -2.89683   GAACGAGCGCGACGA GCAGCCTGGGTAGCGCGCG TGGT CGCTCGCTACCCGGGCTGC  TGTGTGCCATCGCGT 100 39
    trd_1705 1709667 .. 1709679 +  -3.3  -2.71011   AGTCGGGTTCGCGCG                GCCAG CGA CTCGC                TGGTTGCACGAGCCT  40 163
    trd_1706 1709950 .. 1709960 +  -5.4  -2.78816   GGGGGTGCTGCTCTC                 TTCG GGG CGAA                 TCTGGTGAGCGGTGC  45 32
    trd_1707 NONE
    trd_1708 1711135 .. 1711157 +  -7.6  -3.01712   GACGGCCGAGAGCAA           GCGGGCCG ACGACTG CGGCCCGG           TATTGCGAGCGAACA  54 155
    trd_1711 1715108 .. 1715125 +    -2  -3.36515   TGGAAAAGTCGGTCA             TC-AGCG TGAGT CGCTCGA             TCTTTGGACCTCGCA  45 290
    trd_1715 NONE
        coaE 1722083 .. 1722093 +  -2.4  -3.01712   ACAGCCGCCGATCAC                 GAGC GGT GCGC                 TCTTCACCCCCCGCA  41 62
    trd_1717 NONE
    trd_1718 1724654 .. 1724674 +  -2.3  -2.52795   GCCGGAGATGCACCA            CCGCACCGG GAA CCAGCGCGA            TCGGTTGGAGAGGTT  37 203
    trd_1729 NONE
    trd_1730 1735244 .. 1735258 +  -5.6  -2.63913   CGCTCGCCCAGATCG               CCCAGG CAC CGTGGG               TCCTGTGGGATGGTC  45 220
    trd_1732 NONE
    trd_1733 NONE
    trd_1734 NONE
        aceF 1739367 .. 1739408 + -25.9  -3.90744   AGGGTTCGGGCACCT CGAGCGAGCCTGCCGGCTG TAAG CGGTCGGCAGGCTCGCGCG  TTGTTTCGGCAGAGC 100 43
    trd_1736 1741659 .. 1741701 + -19.2  -2.55987   GCACCAGGTGCATCG GCTCCCGCCCGGGACGAGC TGAAAC GCGC-TCTCGGGCGGGAGC GTCTGTCTTTTCGCT  89 41
        uvrA NONE
    trd_1741 1746673 .. 1746701 +    -3  -2.70932   TCGATAACTCGAGCA        GTCAGGCGGG AGCAGCTGA CCCGCCCGAA        TCATTGCCGAAGGGG  40 34
        serS NONE
    trd_1743 NONE
    trd_1744 NONE
    trd_1745 1751561 .. 1751590 +  -4.9  -2.52464   CAGCCTCGATCGTCA       CCCGGTTGTGCGT GATG ACGAGAAACTGGG        TGCGTTCCGCCAGCC  43 131
    trd_1753 NONE
    trd_1754 1761015 .. 1761047 +  -3.4  -4.11216   GTCAGGTTCAACTCG     CG-TCGAGCTGTCCGT TCG ACGTAC-GCACGATCG     TTTTCCCCCTGCAGA  60 185
    trd_1760 NONE
    trd_1761 NONE
         fad 1769627 .. 1769658 +  -8.6  -3.65046   CGAAGAGCGAGCGAG      CTGCCTCGGCAACC GTTC GGTCGGCGGGGTAG       TTGTTGCGCTGCAGC  65 488
    trd_1765 1771114 .. 1771130 +  -3.6  -3.05384   AAGAGGGCGAGAGTT              CACTGC CGGGA GCAGCG              TTGGGTGGAGAACCA  43 58
    trd_1766 1771630 .. 1771654 +  -4.1   -3.4072   CCAGTCGATCGCGTT          CTTGAGCGGCC CGG GTACGCTCCAG          TTGTACTCGGGAGTA  49 336
    trd_1768 NONE
    trd_1769 1773162 .. 1773200 + -13.9   -3.9392   GAGCGATAGCTGAAA  AGGGAGAGAGGCAGGAGG CACT CC-CCTGCCTCTCTCCGG   TTGTTTCACGTGAAA  88 28
    trd_1772 NONE
    trd_1774 1776370 .. 1776383 +  -3.1  -4.76644   GCTCCTCCCTATCAC               CG-GAC ACG GTCTCG               TTTTTACTGAGTCTT  75 2
    trd_1776 NONE
    trd_1778 NONE
    trd_1779 1784550 .. 1784566 +  -3.6  -3.61356   ACTCGGGAAGCGTTG              CCGGAG GATCG CTGCGG              TTTCCGGTGACTCGT  51 309
    trd_1780 NONE
        nuoB NONE
    trd_1782 NONE
        nuoD NONE
    trd_1784 NONE
    trd_1785 NONE
    trd_1786 NONE
    trd_1787 NONE
    trd_1788 NONE
    trd_1789 NONE
    trd_1790 NONE
    trd_1791 1797133 .. 1797156 +  -2.4  -3.94188   CGCTCGCTGGAGCAA          GCGGTCCGA CTGGATA TCGG-CTGC          TTCTTTGGCGTCGAT  55 450
    trd_1795 1801765 .. 1801777 +  -4.8  -3.70902   TCCACTCCTCGGGGA                CGCT GACCG AGCG                TTTGGGTGTGAGCAG  58 506
    trd_1798 NONE
        ychF NONE
    trd_1801 1806953 .. 1806966 +  -5.9  -2.72661   GCGGAGACTCGCCGA               CGGTG ACCA CGCCG                TGATTCGCCATGATG  46 377
    trd_1805 1809824 .. 1809846 +  -4.1  -3.05596   CCCCCCGGTGACCGG           ATGAGCGAT GCCGG ATCGCTCGA           TTGACTCCGCAACTA  45 151
    trd_1806 1811628 .. 1811646 +  -4.5  -2.74144   AAATGGCCGCTCGAC             CGAACAG GTGTG CTGTCCG             CTTTCGCCGTAAGAG  42 60
    trd_1807 NONE
    trd_1808 1813873 .. 1813904 + -20.9  -4.26188   GCGAGTCGGCACCAG      TGGGCGCCGGGGA AAAGCA TCCCCGGCGCCCG       TTTTCGCTCTCTCAG 100 41
    trd_1810 1816225 .. 1816241 +  -9.4  -3.14344   CCACCTTCCAACACC              CGGTCC CACAA GGACCG              TTGGTCAGCGAGATA  60 210
    trd_1820 1830104 .. 1830114 +  -2.4  -2.71712   AGAGGAGTTTCCCAT                 GGAG AGG CCCC                 CTTTGGACCGACCCG  38 115
    trd_1821 1830658 .. 1830682 +    -5  -4.32651   TTCCGCTCGAAGTAC         TGGACGAGGTA GCGT TGCC-CGTCCG          TTTTGCTCACTTCTT  68 153
    trd_1823 NONE
    trd_1824 1835667 .. 1835677 +  -2.4  -3.65351   GCCGGTGTCACCGTC                 CAGG TGG CCAG                 TTTCCGTACCAGTCG  50 48
    trd_1837 1846705 .. 1846727 +  -3.3  -3.42078   CGGTCAGAGCGGTGA           CGACTCCGG CGACC CCGAACTCG           TTCTGGTCCGCTCTC  47 407
    trd_1842 1852156 .. 1852166 +  -6.8  -3.73775   GTGAGTCCGGCTGCT                 TGCG CGG CGCA                 TTTCCTCCCGCTCAG  62 37
        mviN NONE
    trd_1844 NONE
    trd_1845 1855392 .. 1855415 +  -5.2  -3.79906   GAGGGGTTGAACGAT          CGATGAGCAC GCAC GTGCCTGTCG           TTCTTCTCGAGCTGG  58 20
    trd_1846 1856456 .. 1856472 +  -4.3  -3.44051   AGTCCATGAGCGTGC              CGGTGAG GAG CTGGCCG              TTCTCGTCGTAGCGG  51 376
    trd_1850 1863328 .. 1863349 +  -2.2  -2.77148   TCCAGCCTAAAGGCG           GCTGCC-CG CGCAC CGAGGAAGC           TGATCTCTTCCTGCG  38 438
    trd_1854 1865610 .. 1865647 +  -8.5  -3.31461   GGTCCGGGACGACCG   CGAGGACTTCACCG-TCG CGG CGAGCGATCAAGTTCTCG   TTCTGGAAATCGATG  60 269
    trd_1857 NONE
    trd_1859 1870412 .. 1870428 +    -5  -3.16564   GGGATCGGCCCGATC              CGGCCC GTCCA GGTCCG              TTCCTGGGGTGGGCG  47 205
    trd_1879 1890652 .. 1890682 + -22.7  -4.06055   CGCGCTAGCGAGTCC       GAGCCGGTACCCC GTTTG GGGGTACCGGCTC       TTTCGTTTGCGCGAT 100 33
    trd_1880 1891423 .. 1891451 + -13.9  -3.13504   TCACACTGAAGAGAG        TACCGCCCGGT TGCCCTC GCCGGGCGGTA        TCGTTTTGCTCAACG  76 49
    trd_1884 1895385 .. 1895419 +  -6.3  -3.28712   GCCGGAAGGTCGACC    G-GCTCTTCGCCGCGC AAGC GCGCGACGTACAGCGC     TTCTGCCCAGGCGAG  51 315
    trd_1889 1898071 .. 1898118 +  -4.7  -3.53012   GACGCTCCGTCCGGG CGCGACCCCGAGCCG-GCTGCA GGCGG TGCGATACGGCTCTGGGTCCGG TTTCCCGGCGCGGAC  53 199
        gltX NONE
    trd_1891 1900444 .. 1900460 +    -3  -4.86033   GCGGAGACTCATCGC             CGC-ACA AAAC TGTTGCG              TTTTTGTAACGCTTT  78 42
    trd_1893 1902622 .. 1902649 +  -5.5  -3.09505   GGCAGGAAGTGCGCT        TCGGCCCAGTCG CGGTC CG-CAGGGTCGA        TCTTGGCTCCGATCT  49 523
        thrC 1904898 .. 1904926 +    -3  -3.36878   CTCGTCCTTGACCGT        CGCGGTAATCGC GGATG GTGGTTCCGGCG        TTCTCGATCGCTGCC  47 219
    trd_1896 1906148 .. 1906164 +  -5.1  -3.29829   GGCTGAGCGCTGGGA              GTTCTTC GTC GAAGACC              TTCTGAACGCGTGTC  49 183
    trd_1898 1909440 .. 1909459 +  -8.6  -3.14132   CCGTCGGTTTCGGCG            CCA-GCGTG TCG CACGCGTGG            TTGCTCGCGCACCGG  57 173
    trd_1899 NONE
    trd_1900 NONE
    trd_1901 1910852 .. 1910862 +  -6.8  -3.64822   CCAGAGGCAGGCACA                 CGAC GGG GTCG                 TTTGGCTCGAACGGT  59 366
    trd_1903 NONE
    trd_1904 1912646 .. 1912691 + -12.6  -3.90291   TCCCGTTCGAGCGAC GCCGAGGAGACGACAGGGTGTC GACG GGCCCCCTTTCG-C-CCTCGGC TTTACTTGCCGACAT  81 304
    trd_1905 NONE
    trd_1910 NONE
    trd_1912 1922147 .. 1922190 +  -6.6  -3.17075   AGCGCATCGGCTGGA GCGGTTCGCTCCGCAGGCTGG CCA CCAGATTGCGG-GCCAAGAGC TTGGCTTGCCGGACC  51 355
    trd_1914 1924378 .. 1924404 +  -9.5  -3.53012   CGTGTCCTAGTTTGT        CGAGCG-CCTCGC GCA GCGAGGTCG-TCG        TTTCCGCCAGCGCAC  65 204
    trd_1918 NONE
    trd_1919 1929611 .. 1929627 +  -3.6  -3.72576   ACGATCTGTTCCGGT              GTGGCG AGGCC TGCCGC              TTTGGTACCGCGCGA  54 213
    trd_1921 1931619 .. 1931634 + -10.4  -2.52543   ACCCCGGGGCTCGCA              CGCTCC GGCC GGAGCG               TGACTTGACGAGGAT  58 241
    trd_1922 1933911 .. 1933949 +  -8.7  -4.08767   GGGTACCGCTCCGAT   CCCGCTCCTCGGTCGCT CGGCC GGCGGTCTGGGAGCTGG   TTTTGCCCGCATCAC  72 364
    trd_1930 NONE
    trd_1931 NONE
        treY NONE
        glgB NONE
    trd_1935 1952344 .. 1952401 + -10.7  -3.06315   CGGAACTCCGCGTTC GATCTCCGCC-CGCAGCG-TTTCGCC TTTGGGCCC GGCGAGGTCGC-GCGCGGCGGCGATC TGTTCGCGGTCTTGG  63 525
    trd_1940 NONE
    trd_1941 1960271 .. 1960293 +  -2.7  -3.72324   ACTCCATGGGCGATG          CTCGA-GGCA CGGA TGCCGTCCAG           TTCTTCCTCCGCATA  53 262
    trd_1947 NONE
    trd_1948 1967448 .. 1967464 +    -8  -2.62616   TCATGGTCGCTCCCC              GCTGAC ACACA GTCAGC              TCATGTACCGCGTAG  50 372
    trd_1954 NONE
    trd_1955 1974445 .. 1974470 +  -3.9  -3.05343   CGCCCATGCTGCGAC         TGTGCGCGCCTC GAG GAGGC-CACCCA         TCTTCGGGATGTCGG  45 330
    trd_1957 1976867 .. 1976878 +  -4.4  -3.36505   AAAGGTCCGAGTGGA                TGCA GCAA TGCA                 TTGTGGATAACCTCT  49 215
    trd_1966 1984995 .. 1985010 +    -6  -3.31144   ACGAGGTCATCGATC              CGGCGC AGGT GCTCCG               TTGTGGCAGTGGCCG  53 306
    trd_1968 1988172 .. 1988189 +  -6.9    -4.053   CTCCTCTGTCTCGAT             CCGGATG CCCC CAGCCGG              TTTCTCTGGCGTCGT  67 303
    trd_1971 1989471 .. 1989520 +  -6.4  -3.72241   CACCGACGATGCGCA CGATGGGGT-CTCCGCGGTGTCGC GATC GTG-CATCGCGCCGCACCGCATCG TTTCGGTCATTCGTC  62 45
    trd_1978 NONE
    trd_1979 1998296 .. 1998317 +  -7.9  -2.61264   GAGGCGCCAGTCGTA           CTGCGACGG CACC CCGCTGCAG            GTTCTCGGTCACGCG  50 421
    trd_1981 NONE
    trd_1982 2002507 .. 2002517 +  -2.4  -3.67597   ACGCCCTGCTCATCA                 CCGG CTT CCTG                 TTCTTCAATGCCGGC   0 233
    trd_1980 1997829 .. 1997869 - -16.2  -3.52652   TGGAGCGAAGCAGAA GTGGCAGCGAGTGCCGCGA GCGG TCGCGGC-CTGGCTGCCAA  TGTGCTCCCGCGAGC  90 87
        kefB NONE
    trd_1976 NONE
    trd_1975 NONE
    trd_1974 NONE
    trd_1973 NONE
    trd_1972 1989035 .. 1989064 -  -6.4  -2.92371   ATCGATGGAACGACA       CGGCGTCCCCGAT CGATC ATCGGCG-CGCCA       GGGGTGACTGGCTAC  50 488
    trd_1970 NONE
    trd_1969 1987767 .. 1987781 -  -3.4  -2.66602   CGAGCGAACAAGTGA               CTCCGA TCC CCGGCG               CTCCACCAGCTGGAT  40 211
    trd_1967 1984546 .. 1984570 -  -3.6  -2.69799   CCATTCGAGAGAGGA         GACCAT-GACC AGTT GGTCCATTGTC          CTCTTCGCGAGTGGA  40 176
    trd_1965 NONE
        pgsA NONE
    trd_1963 NONE
    trd_1962 1981598 .. 1981621 -  -3.7  -2.71416   CAGCAGCGACACAAC          GCCGAGACG CCACAT CGTCATGGC           TCCTCCTCACCGAAC  42 19
    trd_1961 1981105 .. 1981128 -  -3.7  -3.33696   CCGTTCCCCAAGCAA          GGCCAGGAC TGCAGG GTCCAGTCC           GTATCGCTGCGTGCC  49 144
    trd_1960 1979705 .. 1979715 -  -8.2  -3.95148   AGACAGCCAAGGAAA                 CGCG CCA CGCG                 GTACTGCTCCCCCGT  72 86
    trd_1959 NONE
        dgoA 1976819 .. 1976829 -  -3.2  -4.54047   TTATGGGAGATAAAA                 TGGC CAC ACCA                 CTTTCTTCACTCATG  69 212
    trd_1956 1974120 .. 1974133 -  -9.5  -3.13899   AACCGCGCAGGAACA               GGCGC AGAA GCGCC                GAACTGAGTGCGACG  60 46
    trd_1952 1970058 .. 1970114 -    -8  -4.32067   TACCTCAGAAAACAA TTGGACACCGCGCTGGGCAGCAAGCCGC GCA GCTGCTCG-TCCTCAGCGCGATG-CGAA ATCGTCTCATTGTGT  75 32
    trd_1951 NONE
    trd_1950 1968007 .. 1968025 -  -8.8  -2.70354   GCGTGGAGAAATGGA             GCGACCCC TTC AGGATCGC             TGGGCAAGGTCGTAA  53 161
    trd_1949 1967053 .. 1967084 - -19.6  -3.38768   GGATACGATGGAGAA      GCTCGGCTATCGTCC CGA GGACGAT-GCCGAGC      GCTACTTCATCGAGT 100 197
    trd_1946 1965129 .. 1965151 -  -3.2  -3.40403   CTTTGGCGATCAGAA           GCAGTCGGCC GAA GGCGCACAGC           GCGTCTTCACAACTG  47 32
    trd_1945 1963843 .. 1963857 -  -4.2  -3.19192   GCCGAGTCAATCGAA               GAAGCC TTG GTCTTC               CTCAGCGAGATACCG  47 2
    trd_1944 1963062 .. 1963072 -  -6.8  -3.14132   GCCTCGCTTCAGGAA                 GAGC GGT GCTC                 ACGCCACTGCTCGTA  51 8
    trd_1943 NONE
    trd_1942 1959947 .. 1959957 -  -5.4  -3.61715   GATCGGCCTCAAGAA                 TCAC GGG GTGA                 CGATCACCGGGCGGA  55 167
    trd_1939 NONE
    trd_1938 NONE
    trd_1937 NONE
    trd_1936 NONE
    trd_1934 1951743 .. 1951757 -  -5.6  -3.38046   GTCCGAGCCGAAACA               GGCGAC GCG GTTGCC               CAGAACTGGTTGACC  53 99
    trd_1929 NONE
    trd_1928 NONE
    trd_1927 NONE
        minC NONE
        minD NONE
    trd_1924 1934536 .. 1934551 -    -9  -2.90392   CAGGTTCGAAGTATA              GCAGTG AACT CACTGC               GTGGCGCCGCGACTC  55 19
    trd_1923 1933750 .. 1933793 -  -9.5  -3.70902   CGGCCGAGATCGAAA GCACAGAAGCG-GCGCCGGT TCGCT ACCGGCGAGCGCTCCCTCGC TGGACCGGTCCATCT  71 272
    trd_1920 1929660 .. 1929680 -  -6.7  -2.62184   CTCGGCTCGAGAGCA            GCTCCGCGC CGA GCGGGGAGT            GTCAGCTGGGCTGGC  47 132
    trd_1917 NONE
    trd_1916 NONE
    trd_1915 NONE
    trd_1913 1924090 .. 1924120 -  -3.1  -2.78384   CGGTTCTGGACGAGA      CGGTCGTCCGCGCG ATCA CGGCCGGT-GACCG       GCTGGATGAGGTGCT  40 71
    trd_1911 1921729 .. 1921747 -  -8.8  -3.06183   TCGATCGCGACGGAA             CGATCGTG CAC CGCGATCG             GGCACCGCTTCGCCA  57 78
        cysS 1919752 .. 1919779 - -11.2  -2.91264   CCGCGCACCGACAGA        CGTGGCATCCGCC TCC GGCGGGCGCC-CG        ATCGGCCGGGCGCAC  64 291
    trd_1908 NONE
    trd_1907 NONE
    trd_1906 1914265 .. 1914299 -  -5.6  -2.88579   GGAAGTGCCGACACA     CGCCCAGCGGCTCC TCCCGCC GGAGCCGGTTGACA     CCTGGTTCACCCCTG  47 180
    trd_1902 1910899 .. 1910927 -    -8  -3.74693   TGTGAGTCCAGGAAA        CGGTGCCGGCCG GGACG CGGTCGGCAGCA        GGTGTTCCGACCCGG  65 135
    trd_1897 1905785 .. 1905801 -  -4.3  -2.86164   TCCCCAACCAGCATA              TCCGGTC ACT GGCCGAA              GCGGAGGAGAGCGAT  43 295
        mutM 1904354 .. 1904369 -  -5.4  -2.71364   CGACCGTGGGAAGGA              GCGCAGA CGA TC-GCGC              CCGGCCTCCGTGTCC  44 399
    trd_1892 NONE
    trd_1888 1897717 .. 1897727 -  -5.4  -3.62046   CTACGTGTTCAAGAA                 CTTC CGG GAAG                 CCATGGCGTTCGTGA  55 192
    trd_1887 NONE
    trd_1886 NONE
    trd_1885 1894863 .. 1894891 -  -3.8  -3.53343   AAGGGCTGGCGGAAA       CTC-CTGGGATCG GCCT CGATCCCGCTGAG        GTGGAAACGAACATC  51 239
    trd_1883 NONE
    trd_1882 NONE
    trd_1881 1891420 .. 1891453 - -10.4  -3.12505   AGTTCACACTGAAGA     GAGTACCGCCCGG TTGCCCTCG CCGGGCGGTA-TC     GTTTTGCTCAACGCC  63 33
    trd_1878 NONE
    trd_1877 1885524 .. 1885550 -  -9.4  -2.62184   CCGGTGGGCAGAGCA         GCTCTCCCGGTT CCC AAGCTGGAGAGC         TGTTCTTAGATCTCT  55 31
    trd_1876 NONE
    trd_1875 NONE
    trd_1874 NONE
    trd_1873 NONE
    trd_1872 NONE
    trd_1871 NONE
        hypB NONE
        hypC NONE
    trd_1868 NONE
        hypD NONE
        hypE NONE
    trd_1865 NONE
    trd_1864 NONE
        hypF NONE
    trd_1862 1872474 .. 1872492 -    -3  -2.87051   GCCGCAGGACGAAAC             GGCCGAAC ATG GTCCAGGC             TCCTCGGGCGGCTGA  41 53
    trd_1861 1871475 .. 1871486 -  -7.2  -2.52464   TCGCTCCTCAACTGA                CGCG GATC CGCG                 GATCGAGCATGCCGT  47 6
    trd_1860 NONE
    trd_1858 1869944 .. 1869959 -  -6.1  -2.62184   TCTCTTCCCAGAGCA              GGCGA TGGCGC TCGCC               GCTGCCATCGTGCTC  45 273
    trd_1856 NONE
    trd_1855 NONE
    trd_1853 1865095 .. 1865108 -  -3.1  -3.52459   AGCAAGTTGAGAGAA               CTGGA GGAT TCCAA                ACTGTGACGCTGGTT  49 267
    trd_1852 NONE
    trd_1851 1862429 .. 1862461 -  -4.8  -3.01712   TCGGCCGCGCGAACA     GTGGCCGCG--CTCGC CGC GCGAGGTCGTGGCCAT     GACGACCGTGCCCTT  46 486
    trd_1849 NONE
    trd_1848 1858635 .. 1858665 - -13.2   -5.0925   GGGGAAAAGGAAAAA       TCGAGGGCCCCGTG TGT CGTGGGACCCTCGA       AGGCATCTTTCTCGT 100 51
    trd_1847 1856153 .. 1856186 - -21.1  -3.71672   GGCGAGGAAAAGCAA     GACCGGCAGCACCTA CCGG TGGGTGCTGCCGGTC      GGTCATCGCGTTCAT 100 44
    trd_1841 NONE
    trd_1840 NONE
    trd_1839 NONE
    trd_1838 1845879 .. 1845891 -  -7.7  -2.59431   CCTGGCCACAATCGA                GGAAC TCG GTTCC                TCTCGCGGCCCGCTC  50 477
    trd_1836 1844878 .. 1844888 -  -8.2  -2.78816   TCACCTTCCAGTATA                 CGCG CGA CGCG                 ATTCCATCATGGCGT  55 32
    trd_1835 1844444 .. 1844482 - -14.7  -2.52464   TGTCTCGTGAACGGA  CGAGAGCGGCCGCTCG AGGTAGGA CGAGCGACCGCTCT-G   CCATCCGGACACGAT  73 61
    trd_1834 NONE
    trd_1833 NONE
        pstS 1841960 .. 1841999 - -17.8  -2.70932   CTCGCTCGGCAACGA  CCGGCCGCGAGCAGGAGG ACTT CCTCCTGCTCGCGGATTG   TACCCGGTCTTCTCG  84 53
        pstC NONE
        pstA 1840075 .. 1840085 -  -2.4  -3.29144   GGACTCCCCTCAGAA                 GCGG ATG CGGC                 GCTGCAGCCGAGCGC  44 9
        pstB 1839243 .. 1839259 - -10.1  -2.71144   GATCCCTCCGAACTA              CTAGCCG ATG CGGCCAG              TGATATAGTCCTCGG  59 9
        pstB NONE
        phoU NONE
    trd_1826 1837200 .. 1837224 -  -4.9  -2.55392   AACCGAGTGAACGCA          TGCCGCTGC TGCCCTT GCGGCAGCA          CGATCGTAGCACGGC  43 53
    trd_1825 1835286 .. 1835297 -  -5.8  -3.01924   GACTGTGGGTGAAGA                CTCC GGTC GGAG                 GCATCGCCCGCTACG  48 387
    trd_1822 1830182 .. 1830204 -  -3.2  -4.21462   ACCCAGTACGGAAAA           CGATCGACTC GTC GCGGCGCTCG           GCTATGTCTTTTGGA  64 358
        ftsY NONE
         ffh NONE
    trd_1817 NONE
    trd_1816 1824795 .. 1824812 -  -2.6  -3.14564   CTAGCTGCCGAGGAA             CGTGGC TGTGTT GCCAGG              ATCCACGCTGGCTTC  42 73
    trd_1815 NONE
    trd_1814 NONE
    trd_1813 NONE
    trd_1812 NONE
    trd_1811 1816071 .. 1816087 -  -5.8  -3.63895   GCGAAGCACGGGAAA              CGAGCG CTTCT CGCTCA              GGTGCTCGGCTCACT  57 36
    trd_1809 1813829 .. 1813856 -  -3.4  -4.17023   TCAACGAGGCGAAAA        CATTGCTCGCG GCTGGTG CGCGAGCC-TG        AGCGAGTCGGCACCA  60 98
    trd_1804 NONE
    trd_1803 NONE
    trd_1802 NONE
    trd_1800 NONE
    trd_1797 NONE
    trd_1796 1801171 .. 1801186 -  -4.6   -4.8622   CTGGCCAAGCAAAAA              GGTGGC TTCA GCCACG               GCTACCTGGTCAGTC  81 137
    trd_1794 1798751 .. 1798769 -  -2.2  -2.71712   GCGGCCTCGTCAAAC             GGCCGGCG CTG CACCCGCA             TGGTGTACGACCGTC  38 101
    trd_1793 NONE
    trd_1792 NONE
    trd_1777 1781440 .. 1781477 -  -3.3  -2.71681   GAATTCCGGGAACGA   CGTGGCGGAATCTTCTGG GTA CCGGAA-ATGCTGCCGCG   TCAGGAGGTGATCCA  40 383
    trd_1775 1777627 .. 1777642 -  -2.4  -4.21142   AGCCCAAGAGAGAAA              CCGTCA TAGT CGTCGG               GCCGAGGATAGCGTG  63 13
    trd_1773 NONE
    trd_1771 1773695 .. 1773715 -   -14  -2.66274   CCTCCGACAACGAAC            GCGGGCGA TCCCC TCGCCCGC            CACCGCCACGTCCTT  71 56
    trd_1770 1773163 .. 1773199 - -18.8   -4.1721   AGCGATAGCTGAAAA    GGGAGAGAGGCAGGAG GCACT CCCCTGCCTCTCTCCG    GTTGTTTCACGTGAA 100 48
    trd_1767 1770911 .. 1770931 -  -5.3  -3.62096   TGCGACGAGGCGAAA            GCGAGTATG GCT CAGTCTCGC            ATTCTCGTGTTCTGA  55 436
    trd_1764 1770651 .. 1770665 -    -7   -3.6502   GAGTTTTGACGGAAA               GGCGGC TCT GTCGCC               TGAGCACAGTTCCGT  59 93
    trd_1763 1769273 .. 1769317 -  -8.4  -3.14132   CCGCCGGGCGAGGAA CCTCCCCCGCGGGTCGCACCG CCGA CGGCCCG-CCCGTGTGGAAGA CCGAAAAGCCGTGTT  57 204
    trd_1759 1764423 .. 1764440 -  -3.3  -2.72043   AACCGTGCGGGAAAC             GGGCCAC GCTC ATGGCTC              TCTCCTTTCTCGCTG  40 75
    trd_1758 NONE
        gatC NONE
    trd_1756 1761244 .. 1761258 -  -4.2  -2.50816   TGCGGAGCCAGGAAC               CGATCC AGA GCATCG               CTCAGCCCCCGAACA  41 27
    trd_1755 1760429 .. 1760442 -  -6.7  -3.57792   GTACGGATTGGGAAA               CGACA GCGA TGTCG                TCCTGGCCCTCGCCC  59 444
    trd_1752 NONE
    trd_1751 1758273 .. 1758302 -  -2.7  -2.69151   TCTCCGCAGAGATGA       CGAGCGAGAGGCA GTTT CGGTTCCCGCTCA        GCGACGCACGACCGG  38 23
    trd_1750 1757453 .. 1757483 - -14.1  -2.80816   CGCCCATGCACGAGA      CCGGCAAGG-GGAG ATGC CTCCTCCTTGCCAG       TCTCGATCATACCGA  73 45
    trd_1749 NONE
         ppa 1756035 .. 1756048 -  -3.1  -2.61912   GCAGCCATGGACAAT               CTCCT CCTC AGGAA                CGACGTGCGGCGTGG  39 19
        galE NONE
    trd_1746 1750963 .. 1750986 -  -6.6  -2.70932   CTTCCTGTTGAAGGA          GCAGGTACGG CCGG CCGCACTCGC           GCTGGTGCGCGATCC  48 499
    trd_1739 1742490 .. 1742515 - -11.9  -3.05816   CGACTGGCGAGCGAA         CGAC-GCGAGCC ACT GGCTCGCCATCG         CTTCCAGCTGCAGCT  69 81
    trd_1738 NONE
    trd_1737 1741283 .. 1741296 -  -4.5  -3.75024   CGCCATTACCAACAA               CGTCA ACTA CGACG                TGCAAGCTGATGGAT  56 508
    trd_1731 1735776 .. 1735791 -    -4  -2.81045   CGAGGGAGAAGAGGA              CAT-CGC CAA GCGGATG              AGTTTCCTCCGGCAG  43 54
         pyk 1732394 .. 1732407 -  -3.8  -4.42386   TCCGCAGCGAGAAAA               GTCG AGAAGG CGAC                GCCACGACGGGCAGG  69 238
    trd_1727 1731670 .. 1731707 - -17.7  -4.12188   CCATGAGCGGGAAAA   CGAACTGCCCCCAGCCA GTCC TGGCTGGGGGCAGCGAG    TTCTCAGCGCGGTTC 100 29
    trd_1726 1730753 .. 1730777 -  -4.9  -3.01712   CGTCTCTCGTGAAGA          TCCGACCACGA CCA TCGCGACCGCA          CCATCGCTCGCTGGC  46 49
    trd_1725 NONE
        ispD NONE
        ispF NONE
         dtd NONE
    trd_1721 NONE
    trd_1720 NONE
    trd_1719 1723981 .. 1723992 -  -4.4  -3.28712   CTGGTTTCTCCAGAA                TGCT GCTC AGCA                 GTCGTACCAGCAATT  47 517
        lysA 1717877 .. 1717890 -  -2.3  -3.72576   CGGCCTTCGAGGAAA               CCAGC GCCT GCTCG                TGCGGCATCCCAGTA  53 63
    trd_1713 1716311 .. 1716324 -  -3.1  -2.69151   TCCGTTGACACACGA               TCAAG CTTA CTCGA                GGAAATCGCGGAGTG  40 18
    trd_1712 1714687 .. 1714723 - -11.8  -3.14132   CTCCGTCCTCACCAA   CGTGCACGAGGATCG-CA CCG TGACGATCCTCATG-ACG   CTCGAAGTGACCAGC  69 153
    trd_1710 1712396 .. 1712409 -  -3.8   -3.1585   TCAGCGAAGCGAACA               GCAC CGGGGC GTGC                GACGTGGCCAGCGCT  45 111
    trd_1709 1710684 .. 1710699 -  -6.1  -2.74523   CTACCTCGAATACGA              GGCCT ATGCGG AGGCC               GCACTCGAAACGTTC  46 341
    trd_1688 NONE
    trd_1687 1688917 .. 1688927 -  -6.8  -3.92373   GATCTCACCGACAAA                 CGAG GTG CTCG                 TCGCTGAATCGAGCG  64 190
    trd_1680 1681898 .. 1681915 - -11.3  -3.57462   GAGTGCACTGGTAAA             CGACTGG AGCG CCAGTCG              CTCTGCAGAGCGCCC  74 296
        hexB 1666329 .. 1666341 -  -7.7  -3.53444   TGACCCCGCGCGAAA                TCGAG ATC CTCGA                TTGTGTGGCCCGCGG  60 248
        rfbD 1662559 .. 1662599 - -11.2  -2.73875   TTCTCGCCAATACCA GCGCGAGGCCA-CAGCGG ATCACCG CCGCAGCTGGCCTCGC-C GATAGCCCTCATACC  62 240
    trd_1663 NONE
        ispH NONE
    trd_1661 NONE
    trd_1659 1657787 .. 1657797 -  -4.6  -3.40403   CGCCTTCGACGAGAA                 GGAC CGC GCCC                 TGTTGGAATGGCTGG  51 66
    trd_1656 1654808 .. 1654829 -  -4.3  -3.79419   TCTGGGGAGAAAACA           GAGCCACCG AACT CGCTCGCTC            CCTGTTGGGCCCGCT  56 275
    trd_1654 1650130 .. 1650168 -  -9.4   -2.6891   GAGTATACCAGATCA   TCGGCGCACCCTTCCAGC AAG GCCGGAATGGTCCGGCGC   AGTCGGCCAGAACCA  56 423
    trd_1653 NONE
    trd_1652 1649500 .. 1649532 -   -12  -2.70932   GGCGCCGGGGAACTA     CTCCGGCACGCTTCC CTTC GGATGCGCGCCG-AG      CAACCGACTCCCTCG  65 360
    trd_1643 1639914 .. 1639936 - -16.3  -2.52464   CGGGGGCCTAATCGA           GCCCCGCTC GCGAT GAGCGGGGC           TCGAGTGGAACACCT  80 87
    trd_1635 NONE
    trd_1634 1628538 .. 1628557 - -10.6  -3.29511   GGTACTGCCCGATAA            GCACGGCG GCGT CGCCGGGC             AGAGACGGTAGGGGG  65 108
    trd_1625 1619097 .. 1619116 -  -6.4  -2.82623   GTTGTCGCACAATCA            CGCTCGTT CGTC AAGGAGCG             ACTGCAGGACAGCCA  49 3
    trd_1624 NONE
    trd_1623 NONE
        fabD NONE
        fabG NONE
        accC 1614670 .. 1614680 -  -6.8  -2.64616   GCGCCATCGAGAGGA                 CTGC CGA GCAG                 CCCCCACGGATCGAT  47 51
        nusB 1613742 .. 1613766 -  -4.3  -4.08767   GCGACCTCCCGAAAA         CGCAG-GCACG CGCAC CG-GCACTGCG         GACCCCAACCGATCG  62 380
        acpP 1613282 .. 1613315 -   -19  -3.09671   ACGCTAAGCGTAACA     GACAGGCGCGGGCAC GACGA GT-CCCGCGCCTGTC     TCTGCCGCGTCAGCT  93 46
        tatC 1612061 .. 1612100 -  -7.7  -3.16564   TGGCGAGCGGACGAA  GCGCGGCAGCCAG-CGCA AGCTG CGCGTCTGGCGGACGCTC  CGCGGGGACCGGATC  55 380
    trd_1615 1609887 .. 1609905 - -10.2  -3.45742   GGACGAGGAAGAAGA             GACCGCCG AAG CGGCGACC             GGGACGTGAACCTCA  69 38
    trd_1611 1604204 .. 1604221 -  -3.3  -3.88787   GGACAGCGGCAGAAA             TCACACC GATC GGCGAGA              TCGACCGGTACCCGA  56 205
    trd_1608 1603021 .. 1603047 -  -4.2  -3.53012   TCGCTCGCGGGGAAA         CCGCACTCACCC GCC GGCTGGGCGCGT         ACCGGCAGTGCGAAC  51 167
        phoP NONE
    trd_1599 1590908 .. 1590939 - -16.6   -4.1399   GGAGGTACAGAGAAA      CGGGCGATGCCG GTGGGGGA CGGCACCGCCCG       AGCGTGAGGAGGAGT  95 127
    trd_1598 1588193 .. 1588220 - -25.6   -4.3739   CACTCGCCGAGAAAA        CCGCCCCGGGGC CGTG GCCCCGGGGCGG         ATGCGCGAGGCGCTG 100 43
    trd_1597 1587710 .. 1587757 - -13.2  -4.07885   GACGGCGCGGCAAAA CGACACGGCGCGCTCGCCGCCCG GCA CGCTCAGCG-GCGCGCCAAGACG ACGCTGGCCAGGCTC  89 7
    trd_1591 1580467 .. 1580482 -  -5.4  -2.94099   CGCGCTCACCACACA              GGCCGAG TTC CT-GGCC              CAGGCCGGACTGGGC  46 360
    trd_1589 1578746 .. 1578779 -  -8.7  -2.94416   CACGTCGACGACACA     TCCGC-ACCGGCCGGA CCG CCCGGCCGGCCGCCGC     TCTTCCACCCGCTCG  56 505
    trd_1588 1576420 .. 1576449 - -21.5  -3.33696   CTCCTGCTGAACGAA       CGAGGGCGGGGTC GTGT GACCCCGCCCTCA        CCCAGTCACCCAGAC 100 55
    trd_1586 1572164 .. 1572185 - -10.9  -2.72344   TGCCATTGCCAACCA           CCGTG-TGGG GGA CCCAGCACGG           TGCACTGCCCCCCGT  62 175
    trd_1585 NONE
    trd_1584 1569326 .. 1569356 -  -2.6  -2.52516   TCCCCGAGCACCAAT       TCCGCACATA TGTTCGTATTC TACGCGCGGA       CAGGGGTGCCGTCAA  37 75
    trd_1583 1568126 .. 1568163 -  -9.7  -2.87564   GCATGTGCCGACACA   CCCGTGTCGGGGCGAGGC GGC GCCCCGCCC-GCCACGCC   TGTGGCGCGGCAATT  58 514
         cad 1565405 .. 1565429 -  -9.2  -3.03124   GGCCACGCTCGAAGA         GGCCG-GCGGC CGAC GCCGCACCGCC          ACCATGCTGCAGCTG  59 133
    trd_1575 1558930 .. 1558945 -  -2.5  -3.04398   GGTCTGCGGGAAAAC              CACGC CGATCC GCATG               ACCAGCCCCTTTCCG  42 103
    trd_1574 1558062 .. 1558072 -  -4.6  -3.05596   CACTGGCTCACCCAA                 CCGG CTA CCGA                 ATGGGCGTCAGCCCC  47 19
    trd_1573 1557802 .. 1557840 -    -8  -2.73364   TGCCGAGCGGAACGA  TCGC-GCGAGCCGGCTC CCCACC GAGCCGGCGCGCTGCTT   TCCTCACTGGACACA  51 29
    trd_1571 NONE
    trd_1569 1554110 .. 1554146 - -10.1  -2.78463   AGCTCCTCGACTACA    CGACCCCCTTCGACG CCGATTT CGTCGAAGGTGTCCG    GGCCGGATTGGCAGT  59 335
    trd_1568 NONE
    trd_1567 NONE
    trd_1566 1551074 .. 1551102 -  -5.9  -2.82491   TAGACATCGACGAGA        TCGGCCACGATGC GCG GCATCGTTCCCCA        TATCCTCCGCACTGG  47 103
    trd_1564 1550198 .. 1550208 -  -3.2   -3.6902   TACATCAAGAAAAAG                 CACA ACC TGCG                 GATCGGCGAACGCAC  54 437
    trd_1561 1544748 .. 1544788 -  -5.3  -2.78816   CGATTCCTCAGCACA CCGA-TGGGGGCGGGTGA TTCTGG CCTGCCGCCCCGAATCGG  CGACTTTCCAACTCT  45 39
    trd_1560 1542958 .. 1542969 -  -2.2  -3.09933   GCGGAAGGGATCGAA                TCGG CACG CCAA                 CTCGCTGTCCTGCGC  42 180
        glnA NONE
        glnA 1536485 .. 1536516 - -27.4  -3.14132   GCGCGTGTGGATGAA      GAGCGACGCCCCGG CAAG CCGGGGCGTCGCTC       GAGTTTTCCGTCAAT 100 36
    trd_1554 1535450 .. 1535473 -  -6.6  -2.83715   CTCATCACGATGACA          CCCGAGGCGG TGCG CCGCCTGAAG           CAGTTCATGGACGAG  49 482
    trd_1552 NONE
    trd_1551 1532952 .. 1532968 -  -9.5  -3.10537   CATGCGAAAAGGAGA              GAAAGTG GCG CACTTTC              CTAGGGGGCCCTGCC  60 138
    trd_1550 1532101 .. 1532127 - -11.6  -3.23853   CCCCCGGAACGAAGA         CGACTGGCCC AGACAGG GGACCAGTCG         CGCTGATCCTCGTCC  68 70
    trd_1548 1529194 .. 1529216 -  -6.8  -3.04792   GCACCACGGTCAATA           TCCCGCTCCC ACC GGGGACGGGC           AATCGCGGCTATCTG  51 446
    trd_1546 1527310 .. 1527333 -  -2.4  -3.65351   GGATCCCCATGGAAA          CCATCGCCGGA TTG TCCGCC-ATGA          CCGTGCTTCTCCTCC  50 92
    trd_1545 1527095 .. 1527116 - -13.7  -4.33417   GCGAGGGAGAAGAAA           CCGGCTGGA GCAT CCCAGCCGG            CGATCAGCTTCTGAC 100 55
    trd_1543 1524762 .. 1524792 -  -5.2  -3.15544   GGCGACGGTGATCAA       GTGCAACCGCGCCG AGG CGGAGCGTTTCCTC       GAACGCTCGCTCGCC  47 394
    trd_1540 1521558 .. 1521568 -  -2.4  -3.96327   AGCCTCGACCAGAAA                 CACC GAA GGAG                 GAACCTTGTTCCGAA  57 100
    trd_1537 1517625 .. 1517639 -  -2.1  -2.87931   GCGACGCCGGAGACA              CCT-GG CGCG CCGAGG               ACGAGGGAATCGACC  40 448
    trd_1531 1512449 .. 1512465 -  -4.3  -3.76402   AGCCGAGCGAGGAAA              GCCTCGA GAG CCGAGGA              CATCCGTCGACCGGC  56 83
    trd_1529 NONE
        cadA NONE
    trd_1527 1506837 .. 1506889 -  -6.2  -2.82516   GGCCTCATCACCACA TCGCTCCAGCGCCGCAGGATCGGGCG CCC CGCTCGCCTCTACCGC-CT-GAGCGA GCGTGCTGATGCGCT  47 466
        lysW NONE
    trd_1521 NONE
    trd_1520 NONE
        lysX NONE
        argC NONE
    trd_1517 NONE
        argB NONE
    trd_1515 NONE
    trd_1514 1494945 .. 1494960 - -10.4   -2.8742   CCCAAACACGAACCA              CCGTCC ACTG GGACGG               CCCTCGGCAAGGGTA  60 418
        valS NONE
    trd_1511 1491264 .. 1491284 -  -2.4  -3.85114   AAACTCCACATGAAA            CGGTCCGG TCCAG CAGGATCG            CCTGGTCCTGCTCTC  55 47
    trd_1510 NONE
    trd_1509 1489428 .. 1489451 -    -6  -3.43944   ACGAGCAAGCGAGAA          CTCATCCGTC GCTG GACAGACGAA           CGCCCTTTTCTTCGA  55 3
    trd_1508 NONE
    trd_1507 NONE
    trd_1505 1485828 .. 1485849 -  -8.7  -2.89564   TTGCGACGGGAGACA           GGCGCGCTGA TCG TC-GCGCACC           CGCAAGCGGTTCCAC  55 417
    trd_1500 1481358 .. 1481381 -    -8  -2.52623   TCCCTTCCAGAACAC          CGGCGGCCAG GTAT CCGGCAACCG           CGCCGACTGTACCAC  50 226
    trd_1499 1480677 .. 1480690 -  -2.3  -2.52464   CCTGCCGGTAAGCCA               GTGTC CAGC GCCAC                TGTTTCGACCGTTCA  37 38
    trd_1498 NONE
    trd_1497 1479921 .. 1479945 - -18.6  -2.66152   ACATCAACGCACAAC          GCGGGCAGCG CTGCT CGCTGCCCGC          TCGCTGTCTCCAGTG  87 51
    trd_1496 1479032 .. 1479073 -  -2.3  -3.57971   ATAGCGAGCCTGAAA CGCCGGCCACTTGGT-CGGG TCATG CCCGTACCA-GCGAC-GGAG CTCGTGGCTCGGCGC  50 177
    trd_1489 1472666 .. 1472680 -    -7  -3.14211   ATCTCCCGGCAGGAA               CCGTGC ACA GCGCGG               TCGTCGGCCCCCGTG  51 73
    trd_1487 1470848 .. 1470858 -  -6.8  -3.14881   GAAGGTGGGGACGAA                 CTCG ACA CGAG                 CCGCTGCTTCATGGG  51 240
    trd_1481 1466915 .. 1466938 -  -3.8  -2.70932   TCGTCTGGTGAACCA          CTCACCGGG ACGACCA CCCGGCG-G          TAGACTCGTGCCACG  42 71
    trd_1480 NONE
    trd_1479 1466028 .. 1466047 -  -4.3  -3.21099   CCTTTCCACCACCAA            CGACGATG ATGTA CATCG-CG            GACGCTCCCCACCCA  47 56
    trd_1478 1465313 .. 1465339 -  -6.5  -4.22214   AGGGAGCGAAAACAA         GGCATGCCTCG GTGGA CGAGGCACACT         CGTCGAGAACCTGTC  72 61
    trd_1477 1464086 .. 1464103 -  -6.3  -2.64933   TATCCACGCACATGA             TCCGGCTG CAC CA-CCGGA             TAGCGCGGCGAACAC  45 60
    trd_1472 1460695 .. 1460708 -  -9.5  -3.32109   GGATACAGGAGAACA               GGCCG AACT CGGCC                TCTTTCCGCTTCACC  64 51
    trd_1471 NONE
    trd_1470 NONE
    trd_1469 1456304 .. 1456320 -  -6.5  -3.06162   TACTGTATCCGAAGA              CAGCGCC GTC AGCACTG              GTTCGCGTCCGGATC  51 17
    trd_1468 1454422 .. 1454455 -   -11  -2.64099   TCGGCGCAGGAGAAC     GCACCGCAACCGTC GATCAT GCCGATTGCAGTGC      TGCAGTGTGCACGCA  62 331
    trd_1467 1453956 .. 1453975 -  -3.6  -2.54634   TGGCACAGCAGGAAG            GCT-TCATG AAC CACGATAGC            TGACTATGAGCGAAT  39 258
    trd_1466 1453273 .. 1453303 - -11.9  -2.92293   AAGCCGAAGAGCATA      CAG-GGGGGCACAT TTCA AGGTGCCCCCGCTG       TCTCGTCATCCAGAC  68 40
    trd_1465 1452221 .. 1452235 -  -5.6  -3.17075   CTGGTTGGAATCGAA               CGGCTG GTT CAGCTG               AGTACTGGTGGTGCC  49 211
    trd_1462 NONE
        dapB NONE
    trd_1460 NONE
    trd_1459 NONE
    trd_1458 1445684 .. 1445722 - -18.9  -4.25104   GCTCGGGCAGGAAAA   GCGCTCGCAGCGCTGAC TTCCC GCCAATGCTGCGAGCGC   TCCACCACTTCGGTG 100 54
    trd_1457 1445475 .. 1445485 -  -6.8  -3.30243   ATCGACCGCCGACAA                 GGCA GGG TGCC                 TAGGAAAGAAGTCCC  55 25
    trd_1456 NONE
    trd_1455 NONE
    trd_1454 1443584 .. 1443616 - -21.3  -3.20435   TCAAGCATGCACGAA      GAGAGAGCGGCGGGA TCT TCCCGCCGCTCCCGC      GCCAGGTCAGCAGAA 100 76
    trd_1450 NONE
    trd_1445 1434997 .. 1435009 -  -9.1  -3.28712   GTCGCCTGGGCACAA                GCACG CGA CGTGC                GGGCAGTGCGCACAC  62 471
    trd_1439 1430454 .. 1430474 -  -2.6   -3.5882   GACAGCATCGCCAAA           CTCG-TTCC GGAA GGAATCGAA            GGACGCGTCCCCTAT  50 312
    trd_1434 1424991 .. 1425014 - -12.4   -4.4767   CCACGCACGAGAAAA          GCCCGGGC GTCGAGCT GCCCGGGC           TTGTCCTGCCGCGTG 100 52
    trd_1431 1423059 .. 1423090 -  -9.4  -2.85351   GGTCGCGACAGTATA      GACCGAAAAGAAGC CCGA GCAGCCTTTCGGTC       GTGCAGCCACGAGAA  58 97
    trd_1428 NONE
    trd_1427 1419264 .. 1419277 -  -3.8  -3.72576   CGCGCTCCCAGGAAA               CCAC GACACG GTGG                GAAAGAGCTGCCCCC  56 173
        rplU NONE
        rpmA NONE
    trd_1424 1417996 .. 1418019 -   -11  -2.98072   CGCACCAGAAGTATA          GCAGAGAACC GCCC GGCTCTCCGC           TCAGGCCTCGCTGGC  65 26
    trd_1423 1417655 .. 1417675 - -16.1  -5.27335   GGGCGGAAACAAAAA            GCGGGGCGC AGG ACGCCCCGC            CCCGAGCGATCCCTC 100 46
    trd_1422 1416795 .. 1416807 -  -4.7   -3.2794   GCTGACCGAGATGAA                GACGC GCC GCGAC                GAACTCTGGGCCGTC  49 518
    trd_1419 NONE
    trd_1418 NONE
    trd_1417 1411505 .. 1411525 -    -4  -4.93365   GCCGACAACGAAAAA            CTCGAG GTGGACGCT CTCGAG            CGATATCCGACTGGC  79 168
    trd_1415 NONE
    trd_1414 1408137 .. 1408175 -  -5.3  -3.59979   CGCCCCGAGCGCAAA  TCCGTA-CGCTGCTCATCG ATG CGGTGCGCA-CGACACGGA  AGTACGGGGTCGGCT  55 421
    trd_1410 1403732 .. 1403743 -  -2.2  -3.84406   GCTGCACCACAAGAA                CAAG GGCT CCTG                 ATGTTCTCGTTCCCC  55 107
    trd_1409 NONE
    trd_1408 1400027 .. 1400059 - -21.3  -3.02947   GATGCACCACACACA      CGAGCGGGGAGCGGC ACG ACTGCTCCCCGCTCG      CCTTCGTCGGGCACT 100 52
    trd_1394 NONE
    trd_1393 NONE
    trd_1392 1381400 .. 1381413 -  -2.3  -2.70932   CTGGTTCGTCAATCA               GCTGA TCGC TCGGC                TGCGGCTGGTTCGCG  38 5
    trd_1391 NONE
    trd_1390 NONE
    trd_1389 NONE
    trd_1388 NONE
    trd_1387 1377829 .. 1377860 -  -3.6  -4.17023   GGAAGCACGCCAAAA      GCTCGC-CGCTTTCG CCG CCAAGGCGCGCGACC      TCACGAGCTGGCTAC  60 399
        hemE 1374047 .. 1374070 -  -4.4  -3.17229   AGGCCATGAGCAAGA          CAGCGACGCG CTCG CGTGTCACGG           TTTTCCTCCCTTCTC  45 45
        hemH 1373096 .. 1373114 -  -8.8  -2.83715   CCGATGACGACCACA             TGAGCGTG CAC CTCGCTCA             TCCTACCCCAACGCG  55 23
        hemG 1371509 .. 1371525 -  -3.5  -3.37796   GCGCACCATCCAGAA              TGGCGAG CAC CGCGCCT              GCGGCCGGCCTTCGA  47 200
    trd_1380 1370303 .. 1370332 - -11.5   -3.4878   CCAGACCACAAGGAA       GCCGAGCTTCT CATCGACC AGAAGCCCGGC        CTCACGAATTCCCGG  72 99
        crcB NONE
    trd_1378 1369515 .. 1369538 -    -3  -3.10164   GCAGGGAGGAGGGAA          CCGGGTA-CGC TCA GCTCTGCCCGG          AGACCCCCGATCGGC  43 12
    trd_1377 1369002 .. 1369018 -  -2.2  -2.50816   CCTCCATCGATCAAT              GAGCCT CGAGC ACGCTC              GCGAGATCCACCTGC  37 4
         rnc NONE
    trd_1375 1367133 .. 1367175 -  -4.7  -3.14132   CTCCGGCGCGACGAA CGGACCGTAGCGCGTGGCAT CCTC ACACCTCACGCAACTG-CCG TCCGGCTTCGTGCCC  47 106
    trd_1373 1364631 .. 1364645 -  -2.1  -3.12351   GCGCGCTATACCGAA               CGCAT GCTGG ATACG               GCAGCCCGTGCACTT  42 355
    trd_1367 1355730 .. 1355743 -  -5.9  -3.29144   CGATGGTGCTCACAA               CGCCC GCCT GAGCG                GCACCGTGCACGCGA  51 6
    trd_1366 1354868 .. 1354887 -   -15  -3.33605   AAAGACAACGACGAA            CGCCACCG ACAC CGGTGGCG             CACCTCATACTGTGC  84 66
    trd_1364 NONE
    trd_1361 1351341 .. 1351355 -    -5  -3.16742   CGCAATCCGTAGCAA               CTACGA CTA TCATAG               TGCTCGCGTGGCGGG  47 81
    trd_1360 1350692 .. 1350726 - -10.7  -3.65351   CGAGCTGCAGCGAAA    GC-GAAGCGGGGGC TTCTCGTT GCCCCCGCCCCTGC     TGTCTCACACCGCAT  71 30
    trd_1359 1350230 .. 1350252 -  -4.9  -3.49653   ACCATGCTCAGAGAA          CGTCGT-GAA AGAA CTCGACGACG           ATGGTCACGGTCAGC  53 36
    trd_1358 1349156 .. 1349166 -  -5.4  -3.49475   GCCAGCCGGAGAGAA                 CGAA AGC TTCG                 CTCAGCACCATGACT  53 472
    trd_1357 NONE
    trd_1356 1348374 .. 1348386 -  -4.7  -3.33162   GATCGGACTGGAGAA                CGCGC TCG GAGCG                AACGTTGGAGATACA  51 80
    trd_1355 1346796 .. 1346808 -  -3.4  -3.61398   GCTGCCGCTGAAGAA                CTTG GTGTG CAAG                GTGTGACGTTCTTGC  51 518
    trd_1352 1344444 .. 1344456 -  -3.3  -2.70932   TTTTCTTCCGAATCA                CTCTC CCT GAGTG                TTCTGTTCATCGATC  40 10
    trd_1351 NONE
    trd_1350 NONE
        metE NONE
    trd_1348 1340964 .. 1340988 -  -7.2  -3.22298   GCCACCTACCACCAA         GAGTCAGCCAA CCGA TCGGCTG-CTC          CTCGCTCCTCAGGCG  54 34
    trd_1347 NONE
    trd_1345 1336846 .. 1336862 -  -4.3  -3.46602   TCGGCGATAGGATAA              TCGACCC GTC GGGCGGA              CGTACGAGCACGACC  51 97
    trd_1340 1331577 .. 1331594 -  -4.1  -2.52464   GCTGCGGGCAACCTA             CCGATCA CGAG CGATCAG              GCGCCGCGGGCGACT  41 48
    trd_1339 1330112 .. 1330169 -   -15  -3.28924   GACCGTTCCGGACAA CCGGATCGGACGAT-GTCACGCACG GGTCTGGAA CGTGCGAGACGATCGCCGAATCCGG CGCCGAGTGAGGGGG  83 210
    trd_1336 1327213 .. 1327228 -    -6  -2.71268   TCCGACGACACAGCA              CGCGCC GGGG GGCGCC               ATCAGGGTGACCAGG  46 27
    trd_1329 1320442 .. 1320452 -  -4.6  -3.06796   GGTGAGCGGATGGAA                 CCGA TCC CCGG                 GCTACGCCATCTCGT  47 113
    trd_1327 NONE
        folB NONE
        folP NONE
        folK NONE
    trd_1323 NONE
    trd_1321 1313564 .. 1313575 -  -5.8  -3.21218   ACGCTCGAGGAGCAA                GAGC AGTT GCTC                 CACTTGCTCATGAAG  51 130
    trd_1320 NONE
    trd_1319 NONE
    trd_1318 NONE
    trd_1317 NONE
    trd_1316 1306901 .. 1306912 -  -7.2  -3.05384   CTGCTCCGCAGCGAA                CGCG CTGC CGCG                 TGGGCCCCAGGCCTG  51 109
    trd_1312 NONE
    trd_1311 NONE
    trd_1310 1300456 .. 1300493 - -14.2  -4.13945   ATCCCGACGGGAAAA  CCA-GACGGGGCCGGGCA TGAC CGCCCGGCC-CGTCGCGG   TTTATGCACTCGAAC  93 50
    trd_1308 1298604 .. 1298620 -  -3.5  -3.14931   CCGACCTGGCATGAA              GCGCTCG CTT CGCTCGC              ACTGGACTGAGTTTG  43 48
    trd_1304 NONE
    trd_1302 1294551 .. 1294561 -  -6.8  -3.03159   GGAAGGGCCGCAAGA                 CGTC ATC GACG                 CCATGGTCGCCGCCT  50 318
        groS NONE
        groL 1291441 .. 1291467 - -19.5   -4.7878   GAGGGAGAAAAGAAA         TCCGGGCGCAC TGCTC GTGCGCCCGGA         TCGGCATCCGATCGA 100 50
    trd_1299 NONE
    trd_1298 1289226 .. 1289240 -  -2.8  -2.87683   AGATGGTTCCAGATA               CCTGAT CGC ATCACG               GACGCGCTTCTCCTG  41 21
    trd_1297 NONE
    trd_1296 NONE
    trd_1295 NONE
    trd_1294 1284998 .. 1285027 - -14.3  -2.64274   ACTGCGTCAAATGCA       CCGG-ATCGGCACG ACT CGAGCCGATGCCGG       CGTCCTACTCGGCAC  70 224
    trd_1291 NONE
    trd_1290 NONE
    trd_1289 1281429 .. 1281445 -  -4.4   -5.1675   TCAGCGACGAAAAAA             CCAG-CG ACCA CGTCTGG              TGCGTCAGGTTCCTC  87 300
    trd_1283 1275477 .. 1275492 -  -6.1  -3.05343   TGGACATGGGGAATA              CGCGA TGGCGC TCGCG               CGACTCCATCCAGGC  49 478
    trd_1270 NONE
    trd_1269 1256172 .. 1256189 -  -5.5   -3.5936   CGCAAATCTCCCAAA             CGACGCT CCGG AGCGTCC              TCGGCCAGGTCGAGC  57 459
    trd_1265 1250266 .. 1250281 -    -4  -3.59979   CCCGCGTAGGGGAAA              TCGAGCC TAC GG-TCGA              CTCTGATCCGCGAGC  53 221
    trd_1263 NONE
    trd_1262 1247142 .. 1247154 -  -3.3  -4.09685   GCTGATGCTGGAAAA                CGCGA TTT TCGCC                GTCGCATCACCCGAA  60 376
        glgC NONE
    trd_1258 NONE
    trd_1257 1241566 .. 1241586 -  -3.1  -4.07568   TCCTCCCCTCCAAAA            CGGCAGCGC ATC ACTCTGCCT            TTGGGAAGCGTTGAC  60 173
    trd_1256 1241217 .. 1241246 -  -3.6  -2.52015   TCCATATCGACGAAC      GAT-TCGG-CTGCG CGAC CGCCGTCCGACATC       CGCGAACGGCGCCAT  39 64
    trd_1255 1239213 .. 1239240 - -20.6  -4.96848   CCTGTTAGAGAAAAA        GGGGACGGGGCG CGCT CACCCCGTCCCC         ACCACCCGCGCTAGC 100 36
    trd_1254 NONE
    trd_1253 NONE
        thrC NONE
        thrB 1234814 .. 1234837 -  -5.9  -2.68755   AGAATGAGTATAGTA          CGGGCTGCG ATCACG CGCAACGCG           ATTCCACCGCTGCCG  46 164
    trd_1250 1234397 .. 1234425 - -16.7  -2.87468   GGCGAGTATACCAGA        CGAGCCCCAGAGC AAT GCTCCAGGGCCCG        TACCTCGAGAAAGCC  84 56
        rpsF NONE
    trd_1248 1233459 .. 1233476 -  -3.4  -3.30159   CGAACGGTCTCAGAA             CGGAAC CTGATC GTTCCA              CGGATCATCGTCCAA  47 2
    trd_1247 NONE
    trd_1246 NONE
    trd_1245 NONE
    trd_1244 1229598 .. 1229609 -  -7.2  -2.88069   CCGAGACGAGAATGA                CCGG TGAA CCGG                 AAAGCGCGACCGGAG  49 335
    trd_1242 NONE
    trd_1241 1227018 .. 1227050 -  -9.1  -2.52464   GTCTCCTCGAACGGA     CAGC-GGCCCGTCC ACGAAG GGACGGGCCAGCCC      GCGGTACCACCCTCC  55 160
        leuS 1224046 .. 1224069 -  -3.6  -3.40403   TGCTGCCCAGTACAA          CGGTTGGCCC ACTC GCGCCTTCCG           CGCTCGTCTCGACCA  47 448
    trd_1238 1223012 .. 1223026 -  -6.4  -2.66316   TCCGCCACGAGAGCA               CTCGCT GCC AGCAAG               ATTGGAGGAAACGGC  48 123
    trd_1237 NONE
        pyrG 1220492 .. 1220502 -  -2.4  -2.72152   CCTATCACAAACCCA                 GCGG CAC CAGC                 AACACGGATCAGTCA  38 34
    trd_1235 NONE
        atpB 1219310 .. 1219326 -  -2.1  -3.07198   CGCTCAGAGACAAAG              CGTTCCG TAA CCGACCG              TCAATCGCCGCTGGC  42 26
        atpE 1219029 .. 1219041 -  -5.5  -3.25223   GATCTACAGCACGAA                GGCGA TGA TCACC                GCGACGACGAAGGCA  51 1
        atpF NONE
        atpH NONE
        atpA NONE
        atpG NONE
        atpD NONE
        atpC NONE
        murA NONE
    trd_1225 NONE
    trd_1224 NONE
    trd_1223 NONE
    trd_1222 NONE
    trd_1221 NONE
    trd_1220 NONE
        ccmA NONE
    trd_1218 NONE
    trd_1217 NONE
    trd_1216 1205183 .. 1205216 - -23.3  -2.87146   GACAAGATCAGCACA     TGACCCGAGCGACCC CCAA GGATCGCTCGGGTCA      CTCCCTGTGCTCGCA 100 91
         tig NONE
        clpP NONE
        clpX 1188971 .. 1188992 -  -2.2  -4.30576   TCTCGAGTACGAAAA           GCGGCG-CT CTCCC AGTCGGCGC           CTCAAGAAGGAATGA  63 129
    trd_1197 1185980 .. 1185992 -  -9.1  -3.05384   CTCCTGCGCATGCAA                GCCGT TCG ACGGC                AGGTTCCCGGCTGCG  60 519
    trd_1195 NONE
        recJ 1181672 .. 1181691 - -10.6  -3.42503   GGGGAAGATCGAGAA            CCCGGTCG ATCC CGCCCGGG             TTCAGCGACTCTGCC  67 190
    trd_1192 NONE
    trd_1191 NONE
         ade 1178111 .. 1178130 -  -4.9  -2.71011   AGCTTCTCGCAATCA            GCGCTCG GACTCA CGAGCTC             CTTGCTCGCAACCGC  44 109
    trd_1189 NONE
    trd_1188 1177634 .. 1177652 -  -5.3  -3.32268   GAAGCACTGGCAGAA            CAGGTCGA TCGG TCG-CCTG             CGACCACCGAGTACT  51 50
    trd_1187 1176657 .. 1176677 -  -2.5  -3.48276   TTCGCCGGGAGACAA            CGATTCGAC GAT GCGGAATCA            GTCACCCTTCTTCAA  47 103
    trd_1185 1175710 .. 1175725 -    -4  -3.12378   AACCAGACGAGCGAA              CGATCAC GTC GTGA-CG              GCCGGCGGCCGTGTG  45 171
        purN 1172205 .. 1172221 -    -3  -2.62396   GAGCGTTCGATACGA             CGGACTG TTCA CAGTC-G              TCCCTCCTCATGGAG  39 33
    trd_1182 1170892 .. 1170910 -  -3.9  -3.72231   CCATACATGCAAGAA             GAAGAAC AGCTG ATTCTTC             GTCATGAACTGCTCG  56 219
    trd_1176 NONE
        dnaA 1157527 .. 1157581 -  -8.5  -2.56596   TCGCGTAGCAAGCCA GCTCAGC-AGCTCGATCCGGCGCT GGTCGAGG AGCTCCGGATCGCGCTCGCCGCTC GACGCGAACTGGGCC  53 303
    trd_1157 1144901 .. 1144915 -  -7.1  -3.33087   AACACACCGTCATAA               CGCGA CTTCC TCGCG               GGTGCGTCGCTCGAG  55 5
    trd_1156 1143186 .. 1143200 -  -4.9  -2.98823   CTTCTCGCAGAGATA               CGGCA GCGTT CGCCG               GATCGAAGTTCTCCA  46 287
    trd_1153 NONE
    trd_1152 NONE
    trd_1151 1139248 .. 1139270 -  -3.4  -3.53224   CAGTTCGCGCCGAAA          CCACGCTCG CGCTTT CGAACG-GG           CTCTACCTGCTTCTC  49 254
    trd_1145 1134825 .. 1134844 -   -10  -2.79452   ACGGGTGAAGAGAAG            GC-TCCCGC AGT GCGGGATGC            GCTCGAGGGGCCGAT  60 179
    trd_1138 1123379 .. 1123395 -  -4.3  -2.78384   GGCTGGGGCAGTATA              CCGACTG CCC CAGCCCG              GACTCGCTCATCGAC  42 33
    trd_1137 NONE
    trd_1136 1121425 .. 1121440 -  -5.4  -2.79796   CGTCACGTGATCATA              GATGAC TTGG GCCATC               TGCACCCTCCGTCAT  45 115
    trd_1135 1120291 .. 1120316 - -13.2  -2.52676   GATTCCGCGAACGGA         CGCGCGCCTC GTTGCT GCGGCGCGCG          TCCGTCCCAGTTCTG  67 54
    trd_1130 NONE
    trd_1129 NONE
    trd_1128 1113634 .. 1113645 -  -3.6   -3.2614   CAGCGTGGAGACGAA                GCCG GACC CGAC                 GACCCGATCTATCGA  45 284
        folE 1112426 .. 1112436 -  -4.6  -2.73875   CTCGGTCGAACAGCA                 CCCG AAC CGGA                 GCTCCAGGCCTATGG  44 223
        hemD NONE
        hemB NONE
        hemL NONE
        hemA 1105944 .. 1105973 - -10.7  -2.93435   GCAATCATCGACAGA       GCGACGAGGGTCGC CGA GAGACCCCCGTC-C       TCATCGTGTCTGGTC  62 76
    trd_1121 1103961 .. 1103982 -  -2.2  -3.59979   GCGCGCCAGCTCAAA           TCGACGAG ACGGAG CTCGTCAC            TCGGCGGCGACGCTG  50 22
    trd_1120 1102456 .. 1102492 -  -5.8  -3.08798   ACTGGGTATGCAAGA   CGC-CCCGGTCACCGCT CGAG AACAGCGAGCAGGAGCG    AAGGACACGAAGCTG  49 65
    trd_1116 NONE
    trd_1114 1094319 .. 1094336 - -11.3  -3.53811   CTCACTCGCGGGAAA             TCGACCG TCAT CGGTCGA              CTCTTCCATCTGGCT  72 156
        mutS 1088690 .. 1088701 -  -3.6  -2.78816   CCATCCGCCACGACA                GCCG TGCA CAGC                 GATCACTCGGCTTCC  41 28
    trd_1108 NONE
         amt NONE
    trd_1106 1085449 .. 1085478 - -24.3  -3.33162   CATCCCATGCCACAA       CCGGCCCCCGGGA GCAT CCCCGGGGGCCGG        TTGGTGGGTGGGGAT 100 57
    trd_1103 1078608 .. 1078640 -  -8.4  -3.61178   GTGACCGATCGGAAA     CCGCGCTCGACGGTCA GGT CG-CCG-CGAGCGCGT     GACCGATCACTCCGC  65 32
    trd_1097 1073568 .. 1073592 -  -7.7  -2.78384   CGCCGGGCGACGACA          GCGTTCGCCCG CTA CGCGCGACCAC          TGGTTGGGGAATTCG  51 136
    trd_1092 1065402 .. 1065450 -  -2.2  -3.88291   CACCATCGCCAGAAA GGCGA-GGCCGCGCAACGCATCGA CTT CCCA-GCGGCGCGCGGCTACCGGC CGTTGCACCGAAGCA  55 42
    trd_1089 1059707 .. 1059735 -  -8.8  -5.36441   GTCCGACACAAAAAA       GT-CCGCGCCGGC GTTT GCCGTCACGGCAC        GCCCATTATAACACG 100 51
        rpmH NONE
        rnpA NONE
    trd_1086 1058851 .. 1058868 -  -2.5  -3.33037   ATCCCAAATGATCAA             GTCGACC TCCT GGACGTC              TCAGGCCTTCTCGTG  45 52
    trd_1085 NONE
    trd_1084 1057149 .. 1057184 -  -2.5   -4.2349   GCTGCACACCCAAAA    GAGG-GCATCCTTTCG AAAGA CAGCAGGACGCGCCTC    AGCGACGCGGGTAGA  63 24
    trd_1083 NONE
    trd_1080 1053557 .. 1053567 -  -8.2  -3.75437   AACCAGGGTAGCAAA                 GCCG TCA CGGC                 CTTCCGCCGGCCCGG  67 81
        moaC 1052317 .. 1052333 -  -5.7  -3.62275   AGCGACGACCGGAAA              CCAGCCG GCC CGGCCCG              CTCCTCGACGAGCGG  57 445
    trd_1076 1050254 .. 1050267 -  -3.7  -2.73364   CTTCGATTTCAACGA               GGTGC ATCG GCTCC                TGTGTCCTCCTGTTC  42 5
    trd_1075 NONE
    trd_1074 1048519 .. 1048533 -  -7.8  -3.46602   GTTCCCACAGCAGAA               GCGTCC TGC GGACAC               CGGTAATCGAAGTCG  60 144
    trd_1073 NONE
    trd_1072 1046563 .. 1046575 -  -4.7  -2.70932   GTCGTCGTCGAAGCA                GCCCC CGA GTGGC                CTGGCCGCCCAGCGA  44 304
    trd_1070 NONE
    trd_1069 NONE
    trd_1068 1042652 .. 1042672 -  -3.2  -4.28774   GGATGCAAGCCAAAA            TCCGGAGC GCCCA GCTACAGA            AGATTCCCTATATGC  64 212
    trd_1063 1036263 .. 1036274 -  -5.8  -3.06183   CGCATCCGGAGCGAA                CTCG GGCA CGAG                 GCTCCAGCGATCGCG  49 176
         ppc 1032333 .. 1032359 -  -7.9  -3.28791   ACCGCTGCCGCACAA         CGGGCTGACGA TCCGG TCGTCTTCCCG         GAACGCCTCGAGCAC  57 375
         ald NONE
    trd_1055 1025565 .. 1025594 - -13.6   -4.1891   CCTCCTGAAGACAAA       CACAGCCCCTCG TTCTGG CGAGGGGCTGTC        GAGCGATCACCAGTC  93 44
        glyS 1023970 .. 1023985 -    -9  -3.53224   CACTCTCCCCCGAAA              TCGAGC ACGT GCTCGA               TGCCCTCCGCTCACG  62 174
    trd_1052 1021859 .. 1021884 -  -9.7  -2.90194   ACTGGGGCAATCAGA         CGGTGCAGCAA CGAC TCGGTGCACCG          GTGTCGCCAGCCGTG  58 416
    trd_1049 1017849 .. 1017862 -  -6.7  -3.40522   AGCGTTCCACCAGAA               TCAGC GGGT GCTGA                CGCGCAATCTTTCGG  55 12
        rplS NONE
        rnhB NONE
    trd_1046 NONE
    trd_1045 NONE
    trd_1044 NONE
        hisS NONE
    trd_1042 1012507 .. 1012520 -  -2.4  -3.71627   CGACGAAGAGAAAGA               CAAC CGACTC GTTG                CAAATCCACGTCAGC  53 36
        moaA 1011313 .. 1011334 - -15.9  -3.34043   CGCACGAGCGGAGAA           GGGACGGTC GATC GACCGTCCC            TTCTCCGCTCCTCTT  88 51
    trd_1038 NONE
    trd_1037 NONE
    trd_1036 1004475 .. 1004509 -   -15  -3.19463   GCGAGGATCCAGGAA     GGCGAAGCCCCCAG CTCTGGC CTGGGGGCTCCTCC     CGAGCAATCGACGAT  83 85
    trd_1035 1001799 .. 1001835 - -18.2  -4.05714   AGTGGGAAGTATAAA   CGA-ACACGGCACTGGC CGGA ACCAGTGCCGTGTCTCG    CTGAGAAAACCGTCT 100 44
        radA 1000155 .. 1000174 -  -4.2  -3.81951   GCGGAGACGAGCAAA            CAGCCAAC GCAC GCTTGCTG             GCCGATCGCGGAGCC  58 189
        lspA NONE
    trd_1032 NONE
    trd_1031  996104 ..  996117 -  -2.3  -3.78934   GTTTTGGGAGAAGAA               TGGTG GACT CGCCA                TCTTCGGCTACCCGA  53 235
    trd_1029 NONE
    trd_1028  992795 ..  992830 -  -6.8  -3.69395   GCGACGAGCGAAGAA    CGCGCCTTCGTCGAACA AGT CATT-GCCGAGGGCGCG    CCGGACGACGACGCG  62 213
    trd_1026 NONE
    trd_1025 NONE
    trd_1024 NONE
         lon  985906 ..  985939 - -14.5  -2.86838   GACAGCGAAACATGA     GCGAGCGGGGCTGGTC GTT GTCC-GCCCCGCTCGT     AGAAGGTCTGTGATC  77 52
    trd_1021  984698 ..  984712 -  -2.8  -3.65812   GTCCTCCGAAGAGAA               CGAG CCAAACT CTCG               ATCGATCCGAGCTGT  51 317
        rrsG  982927 ..  982966 -  -4.9  -3.68886   ACCAACTGAGCTAAA CGCCCACG-CCAC-CCCGA CAAC TCGGGTGTGGTCGAGTGCC  AGCGACCGACCTCGA  58 194
    trd_1019  982851 ..  982863 -  -4.7  -2.59748   CAGCCCCATAATCGA                CGCAC GGT GGGCG                TTCCTGGATTCGAAC  43 17
    trd_1018  982682 ..  982704 -  -2.5  -2.61695   GCCACCGGCAAACAG           GCACAGCGG AACCA CCTCGGCGC           TTTCGAACCCGTCAG  38 89
        rrlG  979582 ..  979592 -  -2.4  -4.02108   GCGACGAGAAGGAAA                 GACG CTT CGAC                 GGACGGGCTCGATCG  57 102
        rrfG NONE
    trd_1014  976506 ..  976530 -  -2.9  -3.14745   CGGCGAGAAGATACA         GGCGACC-TGC TCGAC GCATGGT-GCC         TCCCGCCACGAACCA  43 146
    trd_1013 NONE
    trd_1012 NONE
    trd_1011 NONE
    trd_1010  971778 ..  971801 -    -3  -4.10161   CAGCAGCGGCCAAAA          CGAGACTTGC AGCA GCCAGCATCG           TCCACTCCGAACGCC  60 47
    trd_1009  970531 ..  970549 -  -9.6  -3.64703   GCCCTCCTACCGAAA             CGATCATC ATC GATGACCG             ACGATACGATCGTGC  68 364
    trd_1007  968277 ..  968290 -  -3.8  -3.41527   GAAGCGCCACTAGAA               CGGT TCGGTG ACCG                AGTTGTCTTGCCACG  49 6
    trd_1006 NONE
    trd_1004  967413 ..  967425 -  -5.5  -3.53012   TTCTCGCCGGCCAAA                TCCGC TTT ACGGA                GATCGTTCCGCTGAT  55 164
    trd_0994  958882 ..  958892 -  -4.6  -3.53012   CGTCGTCGCCCGAAA                 GCGG TCG CCAC                 CCTCGAAGGCCGCCC  53 432
        rpoB NONE
        rpoC  950663 ..  950702 - -27.4  -3.95324   TACGCTGAACAATAA  CACACCCTCGTGACCCGA GATC TCGGGTCACGAGGGTGTA   GTGTACAGGAATCAG 100 50
        rpsL  950080 ..  950130 -   -15  -2.78384   TTGCTCGGCATGAGA CAGACGAAGC-CGGCAATCCTGGAG CGTT CTCCCG-AT-GCCGCGCTTCGTCTG CCGACAACCACCCAG  75 68
        rpsG  949567 ..  949581 -  -4.2  -3.01924   CATCCTTTCTGAAGA               TCTACC ACC GGTAGT               GGGCGAACGCGCGGT  44 12
        fusA NONE
         tuf  946128 ..  946152 -  -2.8  -3.05963   AGTCGGATTCGAATA         CGCTG-CGTCGG TCT CCG-CGACATCG         CCGACCACCCCTCAC  43 37
        rpsJ  945778 ..  945805 -  -4.8  -2.87132   TGGTGGCTCCAGACA        CTC-CAGCGTGCC CTC GCCACTCTGCGAG        CATGATCTGGAGCGC  45 53
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV  942591 ..  942622 -  -4.2  -3.83502   GATCCCGAGACGAAA      GCCGATCGGGTTGA CTTT CCTACCCACGCGGC       GCTCCCTTCTCCGGC  58 13
        rpsC NONE
        rplP NONE
    trd_0976 NONE
    trd_0975 NONE
        rplN NONE
        rplX NONE
    trd_0972 NONE
        rpsH NONE
    trd_0970  938319 ..  938329 -  -2.4  -3.07113   GAGTAGCCCACTGAA                 CGCC CGA GGCT                 ACTTCTTACCCTTGG  42 24
        rplR  937882 ..  937895 -  -3.8  -3.40403   GCCCCTCGATCAGAA               CTGC AATCCG GCAG                CACGGGCACCGTCAG  49 6
        rpsE NONE
        rpmD NONE
        rplO NONE
    trd_0965 NONE
    trd_0964 NONE
         map NONE
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK NONE
        rpsD  931914 ..  931927 -  -3.8  -2.53012   AAGTCGAGCACGAAT               CTCG CCTCCC CGAG                CGTCCGATTTCTCTA  41 45
        rpoA NONE
        rplQ  930557 ..  930587 -    -6  -2.94099   TTGGCGCACCATACA       GCGGTCATCGCATG CAT CAGGCGACGAACTC       GATCAGCGCCAAGGG  48 11
        truA NONE
        rplM NONE
        rpsI  928691 ..  928728 - -13.6  -3.27298   GTCGCGAACCACCAA   CGAGAAGACGCTGAGGT TGCTC ACCCCAGCGT-TTCCCG   TCACCGACGTCAACG  78 59
    trd_0949  923986 ..  923998 -  -5.5  -3.60098   ACGGCGTACTCGAAA                TCCGG ATC CCGAA                GGCAGAGGCAGCCGA  57 150
    trd_0947 NONE
    trd_0946 NONE
        pncB NONE
    trd_0944 NONE
    trd_0943  918756 ..  918776 -  -8.2  -3.14931   TTGACTCCCCAGGAA            CTCGCCCG TCTGG CGGCCGAG            ACAGCGGCCGACGCG  57 515
   trd_A0937 NONE
    trd_0940 NONE
    trd_0938 NONE
    trd_0937 NONE
    trd_0936 NONE
   trd_A0936 NONE
    trd_0935  914623 ..  914656 - -11.1   -4.2828   CTGCATCCACGAAAA     CACCTCGCT-CGTTGA GCC TCAACCCAGCGAGGCG     GGTGTGCTAGACTGA  88 319
    trd_0922  904822 ..  904834 -  -2.6    -3.737   CAAGTGCGCATCAAA                CCGG GTAAG CCGA                TGGCATTCGGCTTCG  53 420
    trd_0920 NONE
    trd_0919 NONE
   trd_A0918 NONE
        ahcY NONE
        metK NONE
   trd_A0916 NONE
    trd_0916  896286 ..  896307 -  -6.5  -3.48276   GCCTTCTGGACACAA           GCTGGCCAGC CTG GCGGGC-AGC           TCACTTTCTGAACGG  57 174
    trd_0914  895155 ..  895179 -    -5  -3.70811   CTACAGAAGTCGAAA         CG-GCATTGCGC CTC GCGC-ACGCACG         CTTGCGGATCCGGCT  58 89
   trd_A0913  893958 ..  893987 -  -9.3  -2.87136   GTACGAACGAGCAGA       GCGAGGCGAGTCTC ATG GAGACT-GCTCCGC       GACGAGTCATGCTTC  58 123
   trd_A0911  893319 ..  893337 -    -3  -3.01791   ACCGGTCGCGGAAGA             GGCGGG AGTCCAA CTCGCC             CTGCATCCTGACGAT  42 3
   trd_A0910  892575 ..  892592 -  -2.6  -3.30651   TCTGACACCAGAACA             GCTCGC TGCACT GCGAGA              TTTTTGTTGTCATGG  45 47
   trd_A0909  891771 ..  891788 -  -6.3   -3.7941   CACGCCGGAGAAGAA             CCAACTC CCGA AAGTTGG              GCCATACGCGCACGG  60 52
    trd_0910  890285 ..  890303 -  -3.7  -3.68351   GCGCGAGCACGCAAA             GCACGAG TCCTC CGCGCGC             TAACCTCACAATCAG  53 150
    trd_0909  889986 ..  890006 -  -8.9  -3.05343   TGTAGAGGCCTAACA            CGCGGCCCT GTC AAGGCCGAG            ATCGCGGGTTCGAAT  57 103
   trd_A0907  889170 ..  889180 -  -2.4  -3.28712   CGGCGTGGGGGACAA                 CCTC GCC GCGG                 CCGTCCTACCGGCTG  44 200
   trd_A0906  887776 ..  887829 -  -8.1  -4.09511   AAGAGCCTCGCAAAA TCGA-CCTACCTGCGGAGGGTGAAGC CTG GCTCCATCCTCCGCAGGTTTTCTCTA TCGACCAGCAGTTCC  71 24
   trd_A0904  886558 ..  886600 -  -4.1  -3.05816   GGAGCGCGCATCGAA CCCCG-CGACATCATCGT GCTCGATG ACGACGGTGCCGTCGTGG TTCCCCGTGACCGCG  45 330
   trd_A0902  885607 ..  885625 -   -11   -2.5805   ACTATCCCCTAGAAG             TCGATCGC GAG GCGACCGA             GCGACTCGCCCAGCT  62 64
        cofG NONE
        cofH  881050 ..  881089 -  -7.7  -3.69323   CCATGACCAGCGAAA  CACCGCGCACGCTGCAG GAGGTA CTGGAGCGCGCACCGAG   CGTGCAGGAGTTGCT  65 209
   trd_A0897  878511 ..  878523 -  -5.5  -3.17212   GCACTACTCGAGGAA                CTCCG CAT CGAAG                TGCTCCCGACAGTGG  49 123
   trd_A0896  877653 ..  877685 -  -4.8  -3.30771   CGATATGGTGCACAA     CACTGGGAGCACCGG TGAG CCTG-GCTCTCAATG      GTCGAGTCTGGATAC  51 73
    trd_0896 NONE
   trd_A0895  876090 ..  876106 -  -6.5  -4.08767   CCGATCCGTGGAAAA              TTCGTCG CAG CGACGAT              TAACCGTGTATTCGA  68 381
   trd_A0893  875392 ..  875442 -  -8.9  -3.35073   AGCAGCCGGAACGAA CCGGTTGGTACGTTCGACGTGCTC TCAC GATCGCGACGAACGG-CCAACCCG GACCAGTTTATTTAG  60 17
    trd_0893 NONE
    trd_0892 NONE
   trd_A0892 NONE
    trd_0891 NONE
   trd_A0891  872876 ..  872890 -  -6.4  -2.55015   ATTCCACCGAACTCA               TCCACG TCT CGTGAA               CAGCAGGATTCGGCT  47 31
   trd_A0890 NONE
    trd_0888 NONE
        ftsH NONE
    trd_0887 NONE
   trd_A0886 NONE
   trd_A0884 NONE
        otsB  866840 ..  866863 -  -5.2  -3.38072   GCCACGGAATAGGAA          CGCCCATC GAACTCGA GCTGGGCG           GGAAAACCGATCACC  51 450
   trd_A0883  865940 ..  865990 - -10.5  -2.77999   TAGGCACGAACATCA TCCTG-CCAG-GGGTCGAGTTCGAC GGC ATCGAACTCGTCCCACTGGTCATGC CTGTTCACTCAGCCG  59 297
   trd_A0881 NONE
    trd_0882 NONE
   trd_A0880 NONE
    trd_0881  862564 ..  862576 -  -2.6  -4.07568   GCGTGGCTCGGAAAA                GGCA TCGAC CGCC                TCCTCTCAATGTCGT  58 31
    trd_0880 NONE
    trd_0879 NONE
   trd_A0876 NONE
    trd_0878  858354 ..  858387 - -18.9  -2.79915   ATCGATGCGATGACA     CGCTACCGGGGGAGC GAGC ACTCCCCCGGCAGCA      GCGTCACTGGACTGC  93 44
    trd_0876 NONE
    trd_0875 NONE
   trd_A0875  856259 ..  856277 -  -8.8  -2.87931   GGCAGCCGTGAGATA             GGTCGCGA GGA TGGCGACC             GTGCGGGCGAGTCCT  55 22
        yhbH NONE
   trd_A0873  853307 ..  853337 -  -6.9  -3.76393   ACACCCGAAGGGAAA      GCA-GCGCTCGAAC AAGA ACTCGAGCACCTGC       GCCAGCACAAGTTGC  62 414
    trd_0870 NONE
        miaA NONE
    trd_0869 NONE
   trd_A0868 NONE
   trd_A0867 NONE
    trd_0868 NONE
    trd_0866  846893 ..  846944 -    -3  -3.17075   CGGTGGCCAACCCAA TCGTG-TCGATGCGGTCCGGCTCGCC TTAT GGCGAGCCGG-C-G-AGCGAGCTCGG CAAGCCGTCCTCGCG  43 205
   trd_A0864  846344 ..  846357 -  -2.3  -3.28712   TGCGCTTTCCTACAA               CAACG TGCT CGATG                CTGTGGCCGCCTGGC  44 168
   trd_A0863 NONE
   trd_A0862 NONE
        wbbL NONE
   trd_A0858  842346 ..  842362 -  -5.8  -3.61356   ATCACTCACCCGAAA              GCAGCC GAGCA AGCTGC              TGCTGTTCGTCAGGT  57 25
    trd_0859 NONE
   trd_A0857 NONE
    trd_0855 NONE
        proC NONE
    trd_0854  838020 ..  838043 - -13.8  -3.30474   GGCGAGAACGAGGAA          GGGGCCTGTC CAAT GACCGGCCCC           TTCGACCGTGGTGAG  80 60
       dehII NONE
   trd_A0853  834779 ..  834796 -  -2.5  -2.78816   GCACGTCTGACCATA             GTCGGGC TCGG GCCAGGC              CCATTGGACGCATTG  40 409
   trd_A0850 NONE
   trd_A0849  832071 ..  832082 -  -5.8  -3.04501   ACGAATCGGTCAACA                GCAG ATCG CTGC                 CCTACAGTATGCCTA  49 289
   trd_A0848  831746 ..  831799 -    -6  -2.66272   CGGCAGCCAAAGCCA TGCTCGAGTCGGAGGCGCGCTTCACCG AAC CGGCGAT-CGCGCCCCTG-CTCTA-CA ACATCGGGATCATCC  46 97
    trd_0849 NONE
    trd_0848  830670 ..  830715 - -16.9   -3.1355   GTGATCGACAGCGAA GCCGCACTCGCTGT-CACACTC TTA GCGGGCGCACAACGAGTGCGGC CAGAGATTCGCCGTT  85 57
   trd_A0846 NONE
   trd_A0845  829701 ..  829719 -  -3.9  -3.25072   GCGATGAGAAGGGAA            GCACGAGT GCTG ACT-GTGC             TCCATGGCGAGAGCG  47 63
    trd_0846  828927 ..  828956 -  -4.1  -3.63991   CATCATCCCCAACAA       GAGCCCCGTCATG AATT CCTTACGGTGCCC        AAACGTCCTGCCACG  53 15
    trd_0844  827469 ..  827492 -  -6.7    -3.737   CAACCTCTTAGGAAA          CCTAACAGG TGTTCC CCTGTTCGG           CTATCGAGCAGCAGC  62 326
   trd_A0842 NONE
   trd_A0841 NONE
   trd_A0840 NONE
   trd_A0839 NONE
   trd_A0838  822283 ..  822301 -  -2.4  -3.16742   GGTAATCCTGACGAA             CGAACT ATTCTGG AGCTCG             CCTATCTCGTGAGAG  42 363
   trd_A0836  821030 ..  821046 -    -5  -2.72511   GGCAGCTGGGGAAAC              GGCGCC TGGCT GGCGCA              TTTCTTCTGACAGGA  44 65
        mtaP NONE
   trd_A0830 NONE
    trd_0836 NONE
    trd_0835 NONE
   trd_A0829 NONE
    trd_0834 NONE
    trd_0833 NONE
   trd_A0828 NONE
        gyrB NONE
   trd_A0827  811483 ..  811531 -  -2.9  -3.66178   CCGTTCAATCCCAAA GTGGTGCGGGCAGCAGCCGGA GCGCACT TCCATCTGCCGATCGCAACGC TCGATCCCGTTGCGA  51 31
   trd_A0826  810222 ..  810232 -  -5.4  -3.66999   ACTGACGGAGCGAAA                 GTCA AAG TGAC                 TGTCCTGTTCCGCGG  55 491
   trd_A0825 NONE
   trd_A0824 NONE
   trd_A0823 NONE
   trd_A0822  808067 ..  808082 - -11.8  -2.80354   GATACGGAGCCAAAG              CCCGCG TTCT CGCGGG               AGTCCTCGCACTCTT  66 246
   trd_A0817 NONE
         fmt NONE
   trd_A0815 NONE
    trd_0823 NONE
    trd_0822 NONE
   trd_A0814 NONE
   trd_A0813 NONE
    trd_0821 NONE
    trd_0820 NONE
    trd_0819 NONE
    trd_0818 NONE
   trd_A0811 NONE
    trd_0817  795829 ..  795843 -  -5.6  -3.86202   TCGGACCAGAGGAAA               CGATCG AAG CGCTCG               CAACACTGATGTATC  62 229
   trd_A0808  793968 ..  793993 -  -4.6  -3.62597   CGGACCGGGCAACAA         TGGCGGTGAC GGATTA GTCGCGGCCA          GCCTTTTGGCACTGG  55 451
    trd_0810  789465 ..  789475 -  -6.8  -4.25056   CAGTCCAGCAAGAAA                 CGCA TGC TGCG                 CTACAGGAGACGCGG  72 315
    trd_0808 NONE
         pth  787317 ..  787346 -  -2.8  -2.87132   TCGCGCGGGCATACA       CCGATCGGTC-CA TGCTC TGCGGCCGATCCG       GAGTCTCGCCTGCGA  41 48
    trd_0806 NONE
    trd_0805 NONE
    trd_0804 NONE
    trd_0803  785254 ..  785264 -  -5.4  -3.35679   CGCCGTCAGCGAGAA                 TCGT CCG ACGA                 GGCGGCAAGTAGGGC  51 5
   trd_A0797  784589 ..  784613 -  -7.8  -3.05596   TATGGGTGGATCCAA         TGCGACGCCGG CGAA CCGGCGT-GCC          GGAAATCGTGCTGGC  55 17
    trd_0799  781742 ..  781776 - -21.6  -2.82635   ATCGTCAGCATGATA     TTCTCCCTTCCGTTGG TTT CCTACGGAAGGGAGAA     TAGCAGAAAAGGGTT 100 45
    trd_0794  777303 ..  777323 -  -8.9  -2.76322   TCATCGAACATATCA            CCGAGCGAC GCT GTCGCGCAG            GAGTTTGCCCGATCG  53 133
    trd_0791 NONE
   trd_A0790 NONE
   trd_A0789 NONE
    trd_0786 NONE
   trd_A0788 NONE
    trd_0784  770695 ..  770710 -  -3.2  -3.31144   TCCGGAGCCGCACAA              TCGATG TGCT CCTCGA               GAAGGCCAGACAGGT  47 501
   trd_A0781  764679 ..  764698 -  -2.8  -2.52896   TGACCTTGCAATTCA            TTCCCCAT CCCT ACCGGGAA             CTCTTGATGATCACG  39 157
        nusA NONE
   trd_A0780 NONE
    trd_0774 NONE
        ppsA NONE
        infB NONE
        rbfA NONE
    trd_0771 NONE
   trd_A0777 NONE
   trd_A0776 NONE
    trd_0770 NONE
        ribF NONE
   trd_A0775 NONE
        tyrS  756039 ..  756059 -  -2.4  -3.09516   TGTTCGAGCACTGAA            TCACGTGC TCTCC GCTCGTGG            CAGGAGGCGCGCAAA  42 5
   trd_A0774 NONE
   trd_A0773 NONE
    trd_0763 NONE
   trd_A0772 NONE
    trd_0761 NONE
   trd_A0771 NONE
   trd_A0770  750929 ..  750962 -  -6.8  -3.28712   GCGTGGGGGCCAGAA     TCCTGAAACCG-GGC GAGAT GCCGCGACTTCAAGA     GATGGTCGAGCGGGT  54 7
    trd_0759 NONE
   trd_A0769 NONE
   trd_A0768 NONE
        ubiB NONE
   trd_A0767  747995 ..  748005 -  -2.4  -3.28712   TTTCCTCCTCTACAA                 CTGG CAT CCCG                 CGCGGATCATGATGG  44 506
   trd_A0763  744812 ..  744827 -  -6.8  -2.68775   CGAGGAGGAAATCGA              GCGCTC CAGC GAACGC               GAACTCGTCGAAGCG  48 339
   trd_A0755 NONE
   trd_A0753 NONE
   trd_A0751  738515 ..  738527 -  -4.7  -3.55444   GTGCGAGTGCGGAAA                TCGCG GCA CGCGG                TGGGACAGGGATCGA  53 118
   trd_A0747 NONE
   trd_A0746  735020 ..  735034 -  -2.1  -3.25088   CCGCAAATCGAGGAA              GCG-GT CCTG ACTCGC               CTCGGCTTGCGCGTC  44 17
   trd_A0745 NONE
        glmS NONE
   trd_A0743 NONE
    trd_0742 NONE
   trd_A0742 NONE
        rdgB NONE
   trd_A0741 NONE
    trd_0740  730323 ..  730346 -  -7.4  -2.78935   ACAGTCGCCACCACA          GGCGCTTCCAG TTC CTGGAT-CGCC          AGGTCGAGATCGCCA  52 67
    trd_0739 NONE
   trd_A0740  728830 ..  728852 -  -5.4  -3.09492   CCTGCAACTGGAAGA           CCGCTCCGGT ACC ATCGAGGCGG           TTGTCTTCCCTGACC  47 319
   trd_A0736  726333 ..  726355 -  -7.6  -3.08798   AGCGGCGAGTGAATA           GCGAGCTGGT GGC ACTGGCTCGC           GAACTGGATCTTCCC  55 480
    trd_0735 NONE
    trd_0733 NONE
    trd_0732  722710 ..  722723 -  -3.1  -3.05963   ACGCTGATCCGAATA               CCAGCT CTC AGC-GG               AACGTGGTCCAGCGG  43 19
   trd_A0731  722418 ..  722440 -  -8.4  -3.29511   CGCAGTGGTGCAGAA           CGAAGATGCC GAC AGCATCGTCG           AGTCTCTGCTCGAGC  59 70
    trd_0730  721864 ..  721878 -  -4.2  -3.77196   CGATCAGCGACGAAA               TGGGGA TGA TCGCCA               GTCCATTGGCGACCA  56 466
   trd_A0729  719115 ..  719125 -  -2.4   -3.2614   GATCTGCGACAGGAA                 GCCG AGG CGGG                 GGAGGAGATCGAGCT  44 14
   trd_A0728 NONE
    trd_0725  717550 ..  717561 -  -4.4  -2.62184   CCGCGCTCCATACTA                GTGT ACGT ACAC                 TGCGGTGTGGCCATG  41 11
    trd_0724 NONE
   trd_A0727 NONE
   trd_A0726 NONE
    trd_0723 NONE
   trd_A0725 NONE
    trd_0722 NONE
   trd_A0724 NONE
   trd_A0723 NONE
    trd_0721  714466 ..  714496 - -21.3  -4.00042   CCTCCTAGGAAACAA       CCAACGCTCCGGT ACAAG ACCGGAGCGTTGG       GGTGCCTCACGGGGC 100 23
    trd_0720 NONE
    trd_0719 NONE
   trd_A0722 NONE
   trd_A0721 NONE
   trd_A0720 NONE
        ruvB NONE
        queA NONE
   trd_A0719  709666 ..  709696 -  -6.1  -3.57144   CGGCTCACCGGGAAA      CCA-GCGAGCCGTC GACC GACGACCTGCATGG       CCTCGCGCAAGATGG  57 77
   trd_A0718  709198 ..  709210 -  -4.8  -2.90194   ACTGCCGGAATTATA                CAGG CCCTT CCTG                CATTCGAGTATGAGG  45 243
        dnaN NONE
   trd_A0716 NONE
    trd_0713  706336 ..  706362 -  -5.8  -3.27022   GTCATGGCAGAGGAA        CGAGCGCGAGC TCTGGG GCTCGAGC-CG         CTGGCGCGCATTCGT  51 408
   trd_A0714  704813 ..  704840 -  -3.9  -3.80573   CTCACGACGACCAAA        CCCGGTTCGGC GACGCT GCCGTTCCCGG         GCATCGAGCCCGATA  56 274
        murQ  703904 ..  703918 -  -5.6  -4.65895   CTGGGCATTGAAAAA               GGAGAC CGA GTCGCC               ATCTACTTGCCGATG  79 1
    trd_0710 NONE
   trd_A0712 NONE
    trd_0709 NONE
    trd_0708  699734 ..  699766 -   -20  -2.56715   ACCTGCACGAACCGA     GTCTCTGGGGCGGGT GAAA ACCCGCCCCAG-GAC      GCCCTCCTCACGAGA  91 33
    trd_0707 NONE
    trd_0706  698656 ..  698686 - -16.3  -2.85999   GGACTGCACACGATA      CTCCGGCCA-GATG GTGC CATCATGGCCGGAG       CCTGGCAAGTCGTCC  84 57
    trd_0705  696447 ..  696484 -   -25  -3.48395   ACGCTGGTGACACAA   GCGCGATCGCCCGG-GC AGGAA GCTCCGGGCGATCGCGC   GAGGTTCTGCTACAG 100 50
   trd_A0703  693375 ..  693385 -  -2.4  -3.06183   GTGACGTTCATGCAA                 CGAC TCT GGCG                 ATGGCGGGCACGCGG  42 17
   trd_A0698 NONE
    trd_0700 NONE
    trd_0699 NONE
    trd_0698 NONE
        cysS NONE
    trd_0696  684823 ..  684838 - -10.4  -3.81447   CACAGCGTACAAGAA              CCGCAG TGGG CTGCGG               GGAGCTGGACGCAAG  74 101
    trd_0694 NONE
        rplI NONE
         upp NONE
        dnaB NONE
    trd_0691 NONE
    trd_0690 NONE
   trd_A0692 NONE
    trd_0689 NONE
   trd_A0691 NONE
   trd_A0690 NONE
    trd_0688 NONE
   trd_A0689 NONE
    trd_0687 NONE
   trd_A0688  676705 ..  676726 -  -3.7  -4.25283   ATTTCTTCACGAAAA           GTCCTTTTC CCAA GCAAAAGAC            GGCAGGGACTCATTT  66 4
   trd_A0687  675876 ..  675926 - -15.4  -3.26947   CAAGGTCGAGATCAA GTAGCGACGACGGGCCGGGACGC TCACTG GCGTCCCGGCCCGTC-CCTATGC TATACTGGCAGCGAA  86 118
   trd_A0686  675068 ..  675105 -  -9.7  -3.38812   GGGTCGTCAAGAATA   CCCTGACCCGGATCGCT GCTG AGCGGACCGGAACAGAG    GTCATCACACCCCTC  64 156
   trd_A0685 NONE
   trd_A0684 NONE
   trd_A0683  673477 ..  673510 - -24.7  -2.81888   CGGGAAACGTAATCA     GAGGCCGCAGCGTAG GCCT CCACGCTGCGGCCTC      GTCATGTCTTTGAGC 100 524
   trd_A0681 NONE
   trd_A0680  670745 ..  670761 - -10.9  -2.63631   TCAATGGGCAGAGCA              GCGGTTT TGT AAACCGC              GGGTTGTGGGTTCGA  62 303
   trd_A0678  669248 ..  669275 -  -4.8  -3.57792   TCAGTTACCGTGAAA        CGCACG-GACCCT TCC AGAGTCCCGAGCA        ACTGGCTGAGGTTCC  55 254
   trd_A0677  668681 ..  668709 -  -5.2  -3.98159   CACGACAATACCAAA       CGCCCCAATCCCGG CCA CCGGG-C-GGGGTG       TTCGAGGCATCTTGT  62 123
   trd_A0675 NONE
         mfd  665140 ..  665161 -  -5.1  -3.90291   AGCGCGCCAAGGAAA           TCCTCGCGTC GCT GTC-CGAGGA           ATGAACGCTTCACGT  60 35
        lexA NONE
    trd_0665  660197 ..  660212 -  -4.6  -3.17051   TGCTCAGGACGAAGA              GTTCCG AACC CGGATC               GTCCTCGACCGTTGC  47 63
    trd_0664 NONE
   trd_A0667 NONE
    trd_0663  658248 ..  658259 -  -5.8  -2.69964   CGGTGAACTATAGCA                TCGC CAGG GCGA                 TCAGGCGCGCGTGCG  46 26
        purA NONE
        fabZ NONE
    trd_0660 NONE
    trd_0659 NONE
   trd_A0663 NONE
    trd_0658 NONE
    trd_0657  651968 ..  651978 -  -3.2  -2.70932   GTTTTGGCCCAACGA                 GCCT GCA AGAC                 GGGAGCAAAGGGCCT  40 66
    trd_0656  651629 ..  651645 -  -3.6  -2.64144   TCCCCACGCAAAGAC              GGGAGC TCAGT GCTCCA              TGACTGGCATTGTAA  39 59
    trd_0655 NONE
    trd_0654 NONE
   trd_A0659 NONE
    trd_0653  648779 ..  648798 -  -7.2  -3.87815   TTTGACTGTGAGAAA            CGAGTGTAG ATG CT-CACTCG            TTGTGCGAACGTCAG  64 46
        gyrA NONE
   trd_A0656 NONE
   trd_A0655 NONE
   trd_A0654 NONE
        nadD NONE
        flgC NONE
        fliE NONE
        secD NONE
        fliF NONE
        secF NONE
        fliG NONE
    trd_0648 NONE
   trd_A0649 NONE
        fliI NONE
    trd_0647 NONE
        fliJ NONE
        purE NONE
   trd_A0646 NONE
        purK NONE
        flgB  637544 ..  637577 - -12.4  -2.92171   GAGATCGTGAAACGA     GTGGTGGGGCTGAG ACTACA CTCAGCCCCACCTG      TTTTGCTAGATCGTG  68 21
   trd_A0644  636115 ..  636130 -  -4.6  -3.18274   TCGATGGGAACCGAA              GCGATG AAGG CCTCGC               TGATCAGTCGCGAGG  49 39
        flgD NONE
   trd_A0642 NONE
        gpmI NONE
   trd_A0641 NONE
        pheS NONE
   trd_A0640 NONE
   trd_A0639 NONE
        pheT  628958 ..  628984 -  -2.1  -2.73124   GGTGAGCTGGTAAAT         GGTCACCGGCG GAACT CTCCCTTGACC         CGTCGACGGACCTGT  38 1
    trd_0639 NONE
        hisG NONE
        hisD  625018 ..  625072 -    -4  -3.22298   CCGATCGACCAGGAA CTGGTCGCCGCGCTCCAAGCGCTCG GCTATA CG-GCGCAGGAGGCACGGCAAGCCG CAACGCATCCCGAGG  47 107
   trd_A0633  623450 ..  623475 -  -5.5  -3.56092   TCACGATGTGGTAAA         GGACGACGAGAT CGC ATCT-GTCGTGC         TCGCTGAGTCGCCCG  57 56
   trd_A0631  623068 ..  623081 -  -3.8  -2.75343   CCGAGATCGCGAAAC               GGCT GGAACA AGCC                TTCCGGGCTGCCAAC  42 188
   trd_A0630 NONE
    trd_0633 NONE
    trd_0631 NONE
   trd_A0629  621260 ..  621276 -  -8.7   -3.0263   ACCACTCTTGCAATA              CGATCGC GTG ACGATCG              ACCTGGCGAATCGAC  56 5
    trd_0629 NONE
   trd_A0628 NONE
        ilvB NONE
        ilvN NONE
        ilvC NONE
   trd_A0626 NONE
        rpsO NONE
   trd_A0625 NONE
   trd_A0624 NONE
    trd_0623 NONE
        pyrD  611879 ..  611894 -  -5.4  -2.71364   CCAGTCGGTGAACGA              GTCCGAG GTG CTCGG-C              GGACGATCGGTCTGG  44 15
    trd_0620 NONE
    trd_0618  610518 ..  610553 -  -4.6  -3.14564   CTACTCTGGTATCAA    CCGCCGCGTGGAGTC GGACGTG GACGCC-CGCAGCCG    CGTTCCAGCCAGCTC  47 121
   trd_A0620 NONE
   trd_A0619  609143 ..  609158 -  -2.4  -3.53091   ATTTGGCGCTGGAAA              CCGGCG GACA CGTCGA               TGTCGGTCGCTATGT  47 238
   trd_A0614 NONE
         rpe NONE
    trd_0612 NONE
    trd_0611 NONE
    trd_0610 NONE
   trd_A0613  603610 ..  603624 -  -5.7  -3.12351   GCGGTCCAGAGCGAA               CTGGA GTCGA TCCAG               GTAAGTTTGTTCCGT  49 231
    trd_0608 NONE
    trd_0606 NONE
   trd_A0608 NONE
   trd_A0607 NONE
    trd_0605 NONE
   trd_A0606 NONE
   trd_A0605 NONE
    trd_0603  595347 ..  595361 -  -2.8  -3.18264   GTGGTGATTCACCAA               CGCA GATGCGA TGCG               AGCGAGCAGGCTCGC  45 67
    trd_0602  594582 ..  594624 - -18.4   -2.5294   CATTGTCGAGAAGAC GCGCTCGGCCCGGGACGG AGTGGTA CCCTCCCGGACCGAGCGT TGTTCACCGGGCGCG  86 29
    trd_0599 NONE
   trd_A0600 NONE
    trd_0598 NONE
    trd_0597  589963 ..  589975 -  -3.3  -3.96148   CGGTTGCACCAGAAA                GCCCC GGG GAAGC                GCTTCATCCCAGTCC  58 436
    trd_0591 NONE
   trd_A0597 NONE
    trd_0590  586555 ..  586581 - -19.4  -4.07568   GCTCGCCGCCCAAAA         GGGGGCTGCGCG ACT CGCGCAGCGCCC         GCTGTGGCTGCTCGT 100 42
   trd_A0595  586105 ..  586121 -  -5.1  -3.02947   CACTGACCATACACA              CGCTG CAGCTAC CAGCG              GATGACCACCAGCCC  46 2
    trd_0589 NONE
    trd_0588 NONE
   trd_A0594 NONE
    trd_0585 NONE
    trd_0584 NONE
   trd_A0593 NONE
   trd_A0592 NONE
    trd_0583 NONE
   trd_A0591 NONE
   trd_A0590 NONE
   trd_A0589 NONE
   trd_A0588 NONE
   trd_A0587  578177 ..  578195 -  -6.7   -3.4158   CGGAAAAATGATCAA            CCCGCTCG TCGT CGAG-GGG             CAGGTTCACGGCGGG  55 81
   trd_A0586  578044 ..  578058 -  -4.2  -2.52464   CGGCCTTGGAAGCGA               CCGAGT ATT ACTCGC               CGCCGCATGCGACGT  41 5
   trd_A0585  577572 ..  577595 -  -7.4  -2.82519   GGACCATACGAAGGA          GCGACGGTTCG CGT CGAACCGAC-C          GGGCAGGTGTACGTC  52 157
   trd_A0583  576618 ..  576628 -  -3.2  -3.21099   CTCGTCCACGAGGAA                 CTGG GAA CCAA                 TGTCGCCGCGCATTA  45 273
   trd_A0581 NONE
    trd_0575 NONE
   trd_A0580  573418 ..  573460 -  -7.7  -5.30616   TGATGGAAAGAAAAA GCGACCCGGCCAACCTGG TTGTCTGC CCAGGCTGGCCGT-TCTC CTGTGACCCGCTTGT 100 30
   trd_A0577 NONE
    trd_0573 NONE
    trd_0572 NONE
   trd_A0575 NONE
        arcC NONE
   trd_A0574 NONE
    trd_0570  567477 ..  567497 -    -4  -3.29471   CGTGCAGCAGAGGAA           TC-GACGAC CACT GTCGCCTGA            GAGCGCGCGATCACC  47 81
    trd_0569 NONE
    trd_0567 NONE
   trd_A0570  564084 ..  564100 -  -3.7  -3.04792   GTATCATGTGGAACA              GACTG GTCGGTT CAGTC              CGCCGTTGATACCAC  45 18
   trd_A0569 NONE
   trd_A0568 NONE
   trd_A0567  560693 ..  560728 -  -5.4  -2.59683   ACGGGACGGCAGAAG    CGGTGGACGTGTCGAGT CCG AGTCGCCAC-TCCAACG    AGTTCCCCGGCTGAC  43 113
   trd_A0566 NONE
   trd_A0565 NONE
    trd_0563 NONE
   trd_A0564 NONE
        sucA NONE
   trd_A0563 NONE
        sucB NONE
    trd_0560 NONE
        acnA NONE
    trd_0559 NONE
   trd_A0561 NONE
   trd_A0559  548563 ..  548579 -  -7.9  -3.01712   TGGGGTCCTCGAACA              CGCAGTC GTC GACAGCG              GGGGCGCAGAGTGTT  54 206
   trd_A0556 NONE
    trd_0554 NONE
    trd_0553 NONE
   trd_A0554  545990 ..  546018 - -20.3  -2.71011   ACCTCCTTGCAACGA        CTGGACCCCGGTC ATC GACCGGGGTCCTG        CAATTGACCTTCTAC  93 30
   trd_A0553 NONE
    trd_0552 NONE
    trd_0551 NONE
   trd_A0549 NONE
        cofE NONE
    trd_0550 NONE
   trd_A0547  542201 ..  542228 - -17.7  -4.13654   CCTGCAAACCACAAA        CCCCCGCCGGC GACCTG GCCAGCGGGGG         TACTCGATCGGCTAC 100 383
    trd_0549 NONE
    trd_0548 NONE
    trd_0547 NONE
   trd_A0545  540012 ..  540022 -  -2.4  -3.12668   GACTTGGAGACGCAA                 CTCG GTG CGTG                 CTCGATCGACCTGCA  42 320
    trd_0545 NONE
    trd_0544 NONE
   trd_A0542  537801 ..  537818 -  -4.8  -3.97511   CATCGAAGAGAAGAA             TCCGAC CTTGCC GCCGGA              GGTCAAGGCATCGGT  62 299
    trd_0540 NONE
    trd_0539  533355 ..  533365 -  -2.4  -2.65298   TCCAGCCACCATAAT                 CGAG CCA CGCG                 CTTTGCGGACCTGCT  38 117
   trd_A0541  532911 ..  532929 -  -7.4  -3.12847   AACGTGCACACGCAA             CCCAGG GGTTCGT CCTGGG             AAAGTTTGATGCGCC  55 255
    trd_0535  531732 ..  531742 -  -3.2  -3.35996   GACGCTCAGCCACAA                 GACG CTC CATC                 TGCCCCGATATCACG  47 57
    trd_0534 NONE
        ureA NONE
        ureB  530674 ..  530703 -    -2  -2.87136   GTACCAACGAGCATA       GTGTTGACGGTC GATCCG GACCGGCATGAC        AGTCCTCACTCCTCC  40 31
    trd_0531  528744 ..  528769 -  -3.9  -3.52539   CAACTGCAAGGACAA         CTTCCTCGCCGC TCT GCG-CGAGTACG         GAATCGAGGAAGACG  51 256
   trd_A0535 NONE
   trd_A0534  527067 ..  527094 -  -4.6  -2.54896   CGGTGATCGAAGCGA        TCCGGCGCCGAG TCGG CCAGGGGCCGGT         CTTCGTGAGCTTCGA  43 46
   trd_A0533 NONE
   trd_A0532  524152 ..  524163 -  -5.8  -2.85545   GGGTGAAGAACACGA                TCGC AGTG GCGA                 GTGGGAAGGGAGGCG  47 198
   trd_A0530  523414 ..  523430 -  -7.9  -2.87564   GCACTTGCGTACACA              GCGTTGG GTG CCGACGC              TCTTCTGCTTCTCGG  52 262
        recA NONE
    trd_0524 NONE
    trd_0523 NONE
   trd_A0526 NONE
    trd_0522 NONE
    trd_0521 NONE
    trd_0520 NONE
   trd_A0525  516619 ..  516642 -    -6  -3.14132   GTTCCGCTCGAGGAA          CACATCC-GCA TCG TGCTGGACGCG          ATGAAGGAGATCGCT  49 30
   trd_A0523 NONE
   trd_A0522 NONE
    trd_0516 NONE
   trd_A0521 NONE
   trd_A0520  511982 ..  511993 -  -5.8  -4.08216   GCACTTGCCGGAAAA                CTCG CCGG CGAG                 GTCGGTGCGAGTGTG  66 396
   trd_A0518  510991 ..  511024 - -22.5  -3.25823   GGGCGCCCACACCAA     CCACCGAGCCGGCCT CATC AGGCCGGCTCGGTGT      TTTCTCGGGTATCCT 100 10
   trd_A0517 NONE
    trd_0509  508299 ..  508319 -  -2.5  -4.07568   GGCTGCGCTCGAAAA            CGCCG TCGCCCTGGTC CGGCG            TGCGTTCGAGCTCAC  58 143
        selB NONE
    trd_0507 NONE
   trd_A0511  500927 ..  500949 -    -4  -3.02144   TCACGGTTCGGAACA           GCCTTCACGA TCT CCGTCGAGGC           GCGTGAAGGTGTGGC  44 458
   trd_A0509 NONE
   trd_A0508  499255 ..  499268 -  -3.8  -3.05463   ACGGTTGGGATCGAA               GCTG AAGCCG CAGC                TGAGGTGAATGCCGG  45 212
    trd_0499 NONE
    trd_0498  494792 ..  494835 -  -4.5  -3.39895   GGCGCGATCAAGCAA GCAGTG-GCAGC-TGACCTCG GTGT CGCGGTCATGCCGCGCGATGC GATCGGGCTCGAGTT  49 192
    trd_0496 NONE
   trd_A0502 NONE
        aceB  490713 ..  490723 -  -2.4  -3.24735   CACGGAAAGAGCGAA                 GCGG ATG CCGG                 ATAGAATCGGAGTGG  44 220
   trd_A0499  490186 ..  490203 -  -2.6  -2.93723   GTCTCACCAAGGACA             CCATGC CGGGGC GCGTGG              ACGTGAGCGTCGGTG  41 179
   trd_A0498 NONE
    trd_0493  489531 ..  489551 -  -7.5  -3.36492   GTGGGAACGCCAGAA            GCGCCCG GTCCGCG CGAGCGC            GGTGCGGTCATCGAC  58 40
   trd_A0497 NONE
    trd_0492  487506 ..  487519 -  -2.3  -4.49756   CTCGAAACACTAAAA               CTGGT CGAA ACCGG                TCTTCCTGCGGAGCA  67 209
   trd_A0495  485517 ..  485533 -  -2.1  -2.71364   CGAGGCGTTCAAGTA              TTTCGCC ATC GGCGAGT              GAGGAAGGGGAGCGC  38 27
   trd_A0494  484020 ..  484034 -  -7.1  -3.60792   TCGTCAATCGGGAAA               CGGCT TCCGC AGCCG               AAATCGTCGCCGGAG  59 285
    trd_0485 NONE
   trd_A0492  481849 ..  481872 -  -2.4  -3.06162   TAGCGGAGGCGAATA          TCCCATACGA CAAG TTGTACGAGA           TGGAGCAGATCAACG  42 457
   trd_A0491  479931 ..  479946 -  -6.8  -2.51464   TCACGACCGAGGAAG              TCGGCG GTTA CGCCAA               GGAACTAGCAGAGGA  47 14
   trd_A0490  479348 ..  479360 -  -4.7  -3.64599   GCACGATATCTGAAA                CGCGG TTT CCGGG                TCATCGTCGAGCAGG  55 47
   trd_A0489 NONE
    trd_0479 NONE
   trd_A0488  477858 ..  477869 -  -5.8  -2.71731   TTGAGCTGCGAATCA                GCTG CGGT CAGC                 ATGGTCACGGCCTAT  46 110
   trd_A0487  476485 ..  476499 -  -2.8  -2.57132   TTTCGCTCCGACAAT               GGGAAT CTC ATTCTC               GATGTCGCGTTCGGT  39 185
        lpdA  474734 ..  474755 -  -2.9  -3.14527   CAACGGTTATCAACA           GACTG-GACC AGT GGCCGCGGTC           ACGGATCCCCGCGAG  43 13
   trd_A0485 NONE
   trd_A0484 NONE
    trd_0475 NONE
        manA NONE
   trd_A0481 NONE
    trd_0474 NONE
   trd_A0480 NONE
    trd_0473 NONE
    trd_0471 NONE
    trd_0470 NONE
   trd_A0479 NONE
    trd_0469 NONE
   trd_A0478 NONE
   trd_A0476 NONE
    trd_0468 NONE
    trd_0467 NONE
    trd_0466 NONE
   trd_A0474 NONE
    trd_0465 NONE
    trd_0464 NONE
   trd_A0473 NONE
   trd_A0472 NONE
   trd_A0471 NONE
    trd_0463 NONE
   trd_A0470 NONE
   trd_A0469  456457 ..  456472 -  -4.6  -2.91681   GCCGAACTCGAGAGA              CGTGCT GACG AGCTCG               CTCGGGCAGTGGTCG  46 21
   trd_A0468 NONE
   trd_A0467  455406 ..  455416 -  -3.2  -2.69433   GAACGAGACGACAAT                 GCTG CTC CAAC                 TGACGATCCGTAACA  40 18
   trd_A0466 NONE
   trd_A0464 NONE
    trd_0459  453448 ..  453487 -  -2.8  -3.32294   CGAAACTCGTGAGAA  CGATCACGATGC-GTTGCG TAG CGCAACTGTACCAGGATGG  CCGGTCGCCTGACAA  47 48
    trd_0457 NONE
   trd_A0463  451655 ..  451681 -  -3.5  -3.31792   GGACTATCGTGACAA         CGAGGGACTGC GGCGA GCGGCCCGCCG         AGCACGTGCGCTAGG  47 26
    trd_0454 NONE
   trd_A0462 NONE
    trd_0453  450341 ..  450360 -  -2.8  -2.78679   GTGCCGCACTGAAAT            CGATGCCCA TGA TGCGCA-CG            GTGTCACTCTCCGAG  41 29
    trd_0451 NONE
   trd_A0461  448602 ..  448618 -  -4.3  -3.62275   ACCGACGACGGCAAA              GCGGCTG TGG CAGGCAC              GCTCGCTGGTTTCCT  53 279
    trd_0450  446839 ..  446871 -  -3.9  -3.72576   GCCCTCCTGAGGAAA      GTTGCGGCGACCGGG AAA CCCGTCCTCCTCAAG      CGTGGCTTTGCGGCG  56 426
   trd_A0458  445214 ..  445227 -  -6.7  -3.14564   CGATTCGGTGATCAA               GATCG ATCC CGATC                TCCCGCTCGATCGCG  51 507
    trd_0447  443287 ..  443322 - -14.7  -4.59773   CCCGATCGGGAAAAA    TCTGCGACCCGCCAG GTGGTG CTGGCGGGCCGCAAG     TAAGCAGAGGATCAG 100 37
   trd_A0450 NONE
    trd_0440 NONE
        mutS NONE
   trd_A0448  433207 ..  433226 -  -3.4  -3.64703   CTGTGTCGACGGAAA            GCCGCTCC ACTC GGAGCCTC             GGCGATACATCGTGC  51 235
        hisC NONE
        hisB NONE
   trd_A0444  428835 ..  428864 -  -2.7  -3.28712   TTCGGCCCTGCACAA       GGCG-ATCCGCGGC TCG GACCCGGATGCGGC       GCTCTACTGGTTAGC  44 39
         map NONE
    trd_0424  420937 ..  420964 - -15.6  -2.52623   TCGTTCGGAGAAGAG        CGAGCCCCCGGCG CAA CAC-GGGGGCTCG        TGGCGAGACTCGGTT  77 58
   trd_A0434 NONE
    trd_0423 NONE
    trd_0421  417889 ..  417903 -   -10  -3.25823   GTCTTGCCAGAGCAA               GACGAG GCA CTCGTC               GAGGCGCTACGCCGT  65 51
    trd_0419 NONE
   trd_A0430 NONE
   trd_A0429 NONE
    trd_0418 NONE
    trd_0417 NONE
    trd_0415 NONE
         eat NONE
   trd_A0427 NONE
   trd_A0426 NONE
        dapA NONE
        dapB NONE
   trd_A0425 NONE
    trd_0412 NONE
   trd_A0423  410689 ..  410715 -  -3.6  -2.52464   TCGGTGCTGAACGCA         GCACCGTCTCAT TCA ATGGTACGGCAC         GAGGGCCCGCACGAT  39 18
    trd_0411  410254 ..  410286 -  -2.1  -3.39895   TCCTCGATCAACGAA    CAC-CGTTCCCTGCTC CCCA GAGCAGG-A-CGAGCG     ATCATCCGCGCCGCT  45 43
    trd_0410 NONE
    trd_0409 NONE
    trd_0408  408214 ..  408249 - -16.2  -3.28791   ACCGGCCTGCGAGAA    CGATGCAGGGGCAGGT GAGC ACCTGCCCCTGTACCA     CCGGCTCTACGACCG  86 46
   trd_A0419 NONE
    trd_0407  406153 ..  406172 -  -9.2  -2.74019   GATAAGGGGTAATGA            GCGGTCGC TCGC GCGACCGA             GCATCTGCTCGGACG  56 287
    trd_0404 NONE
    trd_0403 NONE
   trd_A0414  400525 ..  400542 -  -9.1  -3.23216   TCCGACCACCACGAA             GCCGGAC GCTG GTCCAGC              AGTCGGACTCGAGCA  62 214
   trd_A0411  400200 ..  400220 -  -8.1  -3.05384   TCGCGCGGGAGGCAA            TCGCGGGCG GGG CGACCGCGC            TCCAGCTGCGCTGGA  55 12
    trd_0397 NONE
    trd_0392 NONE
    trd_0391 NONE
    trd_0390  390669 ..  390694 -    -4  -3.47322   TTGCATGAGAACGAA         GCCGCAGAGGA TCGTG TCCTC-ACGAC         TCGGTCGATGACGTG  51 19
    trd_0388 NONE
   trd_A0400 NONE
    trd_0387 NONE
   trd_A0399 NONE
    trd_0386 NONE
    trd_0385 NONE
    trd_0383  385356 ..  385389 -  -8.1  -3.60792   CTCGGAACGCTCAAA     GCGGC-GGTCACGAAA TAC TTGCGCGACCAGCTGC     GTCGCGAGGCCGGTC  63 117
    trd_0382  384458 ..  384477 -  -2.1  -2.61695   TCCACCGCCAAACAC            GGTTCAGC TCAGC GCCGA-CC            AGCCCGTGCTTCCTG  38 14
        sufC NONE
   trd_A0396 NONE
        sufB NONE
        sufD NONE
    trd_0378 NONE
    trd_0377 NONE
    trd_0376  378628 ..  378641 -  -2.3  -3.27951   CAGCTGATCAGAATA               CCCGA GAGA CCGAG                CAGGGGATGTCGTCC  44 43
    trd_0374  377648 ..  377674 -  -8.7  -3.63336   AGAGAGTATGCCAAA        GCGGTCGCAGAC AGCG GACTGCGAC-GC         ACACTTCGTCAAATT  65 63
    trd_0373  377054 ..  377083 - -16.5  -4.52589   CTGTCCGAGACAAAA       TGAGCGACCTGGA ACAT TCCAGGTCGCTCC        AGAATCGTTGGACTC 100 50
    trd_0371  375210 ..  375223 -  -3.7  -3.73953   ATGAGTTGTACCAAA               GCCCC GTCT GGGGA                AGCAGCTCGGTCAAG  56 36
    trd_0370 NONE
    trd_0369 NONE
   trd_A0386 NONE
        metX NONE
   trd_A0385  369772 ..  369787 -    -4  -3.32963   ACTCTCATGGCAGAA              GA-AGGG GTA CCCTATC              AGGAGGCGCTGCGAC  49 496
         asd  367470 ..  367481 -  -5.8  -2.78463   AGGTGCTCGACTATA                CGGT CCTG ACCG                 AATATCGCAATGGGC  46 463
   trd_A0381 NONE
        merA  364563 ..  364574 -  -5.8  -3.13403   CGGGCGTTACGAACA                TCGC TACA GCGA                 TCGGCGAAGCGTATG  49 456
   trd_A0376 NONE
    trd_0362  362881 ..  362912 -  -6.6  -2.78596   CATTTGCCGAGCAGA      GGGTGTCACCTGG TATTTCG CC-GGTGACACCG      ACGCCATACCGGAGA  48 272
    trd_0359 NONE
   trd_A0375 NONE
   trd_A0374 NONE
   trd_A0373 NONE
         ggt NONE
    trd_0357 NONE
    trd_0356 NONE
   trd_A0372 NONE
   trd_A0371 NONE
   trd_A0370 NONE
   trd_A0369  356597 ..  356631 -  -2.7  -3.30159   GCAATCGGGCGATAA    CGAGGTCCTG-CGCCG CATG CGGCGTCACTACACCG     TGGAGGAATACCGCG  45 24
    trd_0353 NONE
    trd_0352  353467 ..  353479 -  -3.3  -2.52464   CGCGTGGCGAACCTA                TCTCG TGC CGGGA                CTTCGCCATCTGCTG  39 462
   trd_A0362 NONE
   trd_A0361  350035 ..  350054 -  -3.4  -3.28924   TATCGCCGCGTACAA            GACGGTCG AACT CGTGCGTC             GCCTGATCCAGGGTG  45 43
   trd_A0360 NONE
   trd_A0359 NONE
    trd_0345  349222 ..  349236 -  -9.2    -4.386   GAACGCTTGAGAAAA               CCGGGG TGC CCCCAG               CGGGATTCGAACCCG  83 14
    trd_0344 NONE
        prmA  347116 ..  347139 -  -3.1  -3.71848   TTCGGTCACGAAGAA          GCGATG-GCC CCGCC GGCTCATGGC          CGATTCCGCCGCAGG  54 19
   trd_A0357 NONE
    trd_0341  346030 ..  346069 -    -7  -3.89822   TACCGATTCCAGAAA  GCATCGATCCGCGGCGAC GGGA GCGAACGCGGATCAAGGC   GCATGGCACCGAGGA  64 295
   trd_A0355 NONE
    trd_0339 NONE
   trd_A0354 NONE
   trd_A0352  342023 ..  342034 -  -4.4  -4.08692   GAACGCGTGGCAAAA                CGAA CCGA TTCG                 AGGAGGGCGGAACTT  62 381
    trd_0333 NONE
    trd_0332  335582 ..  335599 -  -5.5  -3.07113   GATGACCGCATCGAA             GCGATGG AACA CCATGGC              TCAGCCTCCTGCCTG  49 26
        nadB NONE
    trd_0330 NONE
    trd_0329 NONE
   trd_A0344  331955 ..  331978 - -19.6  -3.48276   GCGCGGGTCAGAGAA          CGGGGCCGTC AGCC GACGGCCCCG           GGTACAGGGAGGGAG 100 105
   trd_A0343 NONE
    trd_0327 NONE
   trd_A0342 NONE
    trd_0326 NONE
    trd_0325 NONE
    trd_0324 NONE
   trd_A0341 NONE
    trd_0323 NONE
   trd_A0340 NONE
   trd_A0339 NONE
    trd_0322 NONE
   trd_A0338 NONE
    trd_0321 NONE
    trd_0320 NONE
   trd_A0337 NONE
   trd_A0336 NONE
   trd_A0335 NONE
   trd_A0334 NONE
   trd_A0333 NONE
   trd_A0332  319963 ..  319976 -  -5.9  -3.14132   GCTCGTTCCGATCAA               CCGGC GTTG GCCGA                TCGATGAATTGCTGG  49 113
   trd_A0331 NONE
   trd_A0330 NONE
    trd_0312 NONE
    trd_0310 NONE
   trd_A0329 NONE
   trd_A0328 NONE
    trd_0309 NONE
   trd_A0327 NONE
    trd_0308 NONE
   trd_A0326  312737 ..  312757 -  -4.7  -3.14211   ATCGTGGTCGAGGAA           CGCCCCGA TCAGCC TC-GGGCG            CAGCTCGGAACCGGT  47 14
   trd_A0325 NONE
   trd_A0324 NONE
   trd_A0323  308585 ..  308601 -  -6.5  -3.14132   CTGTTCCTCGAGGAA              GCGGC GCTGGTG GCCGC              CATCGACGAAGCGGA  51 42
    trd_0303 NONE
   trd_A0320 NONE
    trd_0302 NONE
   trd_A0319 NONE
    trd_0301 NONE
   trd_A0318 NONE
    trd_0299 NONE
   trd_A0317  302994 ..  303004 -  -2.4  -4.08216   GGATCGCTCGCAAAA                 TCGG TAT CCGC                 AACAGGATCGCCTTG  58 211
    trd_0298 NONE
   trd_A0314 NONE
    trd_0297  301187 ..  301211 -  -5.6   -4.3534   GGCCAAGGAGGAAAA          GCATCCCCCG TGGCC CGGGAGCTAC          TCACCGATATCCTTG  73 22
    trd_0296 NONE
   trd_A0312 NONE
    trd_0295 NONE
    trd_0294 NONE
   trd_A0311 NONE
    trd_0293 NONE
    trd_0290 NONE
   trd_A0310  294757 ..  294769 -  -6.2  -3.14344   GAGCGCTGGCACCAA                GCGG CCGGT CCGC                TGACGGCATTGCTCC  49 524
    trd_0285  291409 ..  291438 -  -4.2  -3.55444   CTTCGATGGCGCAAA       GGTGACTGTCAC ACTGCA GTGGCAGCGACC        ACGCGATCTCATGTG  51 152
    trd_0283  289480 ..  289492 -  -4.7  -3.87815   CGGGACCCCGACAAA                CGTCG TAT CGCCG                AGGAGCGGGCCAAGC  60 321
    trd_0282 NONE
    trd_0281 NONE
    trd_0280 NONE
   trd_A0302 NONE
   trd_A0301 NONE
    trd_0278 NONE
   trd_A0300 NONE
    trd_0277  284643 ..  284662 -  -5.7  -3.59262   GGGCAGAGCGGCAAA            CCGACCGG TGATG CCGGT-GG            CCTGCAGTGCAAGGC  57 83
   trd_A0296  283091 ..  283111 -    -6  -3.21276   TGTCGCTGCACAAGA            GCCAGCGC GCCAA GCGCAGAC            GCATACGGTCAGCGC  51 384
   trd_A0293 NONE
   trd_A0292 NONE
   trd_A0291 NONE
    trd_0269 NONE
   trd_A0290 NONE
   trd_A0289 NONE
   trd_A0288  275182 ..  275193 -  -5.8  -3.53012   CGGCTGCTGGGGAAA                TCGC CATC GCGA                 TCGAGAACGCGCTGC  55 393
   trd_A0287 NONE
   trd_A0286 NONE
   trd_A0285 NONE
   trd_A0284 NONE
    trd_0266 NONE
   trd_A0283 NONE
   trd_A0282 NONE
    trd_0265  271367 ..  271393 -  -3.4   -3.6715   TCAGCGAATGGGAAA         TCGGTGCGACCC CGT GGGACGATCCGG         AGCGGTACCGCCGTC  51 289
    trd_0258  263238 ..  263275 -  -9.1  -3.06261   CGCCAATGGGCAACA   CGAGGCTCCCTTCGGTCG CTA CG-CCGACGAGAAGCTCG   GCGACCGCCGCGTTG  60 295
    trd_0256 NONE
    trd_0255  261691 ..  261714 -  -4.5  -3.91144   GCGACAGTGCAGAAA          CGCCTGCTCC GCGTG GGAGCCG-CG          AACCGCTCATCCGTC  58 54
   trd_A0277 NONE
    trd_0254 NONE
   trd_A0276  260089 ..  260101 -  -4.7  -3.13164   CTGGGAAGCATCGAA                CGGGC CAG GCTCG                GTGGGCCGAGTTTCT  47 32
    trd_0252 NONE
    trd_0251 NONE
   trd_A0274 NONE
   trd_A0273 NONE
    trd_0250 NONE
   trd_A0272 NONE
   trd_A0271 NONE
    trd_0249 NONE
    trd_0248 NONE
    trd_0247 NONE
    trd_0246 NONE
    trd_0245 NONE
    trd_0244 NONE
    trd_0243 NONE
   trd_A0265 NONE
    trd_0242 NONE
    trd_0241 NONE
    trd_0240 NONE
   trd_A0263 NONE
   trd_A0262 NONE
    trd_0237 NONE
    trd_0236 NONE
        menD NONE
        aroA NONE
   trd_A0259  245326 ..  245344 -  -8.9  -2.71263   AACTCGGTGGAATCA             CGATCGA GACGT TCGATCG             TGACGAGATCGACCG  53 91
    trd_0228  239512 ..  239526 -  -4.2  -2.84795   AAAGGGGGAGGAAAG               TCCGTA ATA TCCGGA               GACGGCGAGCCCCGG  43 82
   trd_A0254 NONE
   trd_A0253 NONE
    trd_0227 NONE
   trd_A0252 NONE
        trmD  237210 ..  237228 -  -3.1  -2.63901   AGCCGAGCAACGAAC             GTGGTTC AGCGG GAAGCAC             CCTGCTCTCCTCCCT  39 12
    trd_0225  236948 ..  236964 -  -3.5  -2.63596   GTGGATGCGACATCA              GCGCGCG CCT CTCTCGC              TCCTCAGCGGCGCAT  39 29
    trd_0224  236215 ..  236236 - -17.3   -3.1577   AGCCAACAGGCAAGA           CCGGGCTGG GATA CCAGCCCGG            TTTTCATTTACCGTG  88 33
    trd_0221 NONE
   trd_A0245 NONE
    trd_0220 NONE
   trd_A0242 NONE
    trd_0219  229062 ..  229072 -  -4.6  -2.72144   CTACTCTCCGGAAAT                 CCAC TGG GCGG                 CTTTCCGTCTACCGC  44 292
   trd_A0239 NONE
   trd_A0238 NONE
        rumA NONE
         maf  225228 ..  225258 - -19.9  -5.27923   GAACCCCATAAAAAA       GGCCTCTGGATTC GGGCT GAATCCAGAGGCC       CGCTCGCTCGCTCGA 100 378
    trd_0214 NONE
        carA NONE
        carB NONE
   trd_A0231 NONE
   trd_A0230 NONE
    trd_0211 NONE
   trd_A0229 NONE
        pyrE  217575 ..  217604 -  -2.7  -3.61517   ATCCTGGGGGAAGAA       GACCTCCT-GCGCA TGC TGCGCGAGTCGGGC       ATCGAAGTCGAGGCC  50 50
    trd_0208 NONE
   trd_A0225 NONE
    trd_0207 NONE
   trd_A0224 NONE
    trd_0206 NONE
    trd_0205  210475 ..  210494 -  -4.2    -3.484   TTGAGTATACCAGAA            GGGCCG-GT TCC ACTCGTCCC            CATCACTCGTCACCG  51 28
        recR  209781 ..  209801 -  -2.4  -3.27475   CTCGCCACCAGAACA            CGCCAGGA CCTCC TCCGCGCG            CTTCAGAGCTTCAGA  44 36
    trd_0203 NONE
    trd_0202 NONE
         tmk NONE
    trd_0200 NONE
    trd_0198  205422 ..  205448 -  -6.5  -3.66178   CCGGCGAACCCGAAA        TGCCGACACGCC ATCA GGCGCG-CGGTA         ACTTGCTGGTATCCG  59 12
    trd_0197 NONE
        recO NONE
    trd_0195  202130 ..  202145 -  -4.6  -3.03441   GACGAGGTGTCAAGA              GGAGCG TGTG CTCTCC               ATCACGGAGCGTGGT  46 82
    trd_0194  200488 ..  200535 -  -4.9  -2.87132   GCCTGCCCGGACACA TGCCACGCCAGCGATCGAGT TCCTGGCAC ACTCGACCGTCGGC-TCGCA CGTGGCATGAGACCT  45 266
    trd_0193 NONE
    trd_0192 NONE
    trd_0191 NONE
    trd_0190 NONE
    trd_0189  194611 ..  194622 -  -4.4  -3.39288   GATCGCGCAAGAATA                GAAC CCAT GTTC                 GAGTTCTGCTCAATC  49 63
        recA NONE
    trd_0187 NONE
    trd_0186  191507 ..  191517 -  -2.4  -3.06261   GCTCAATGGGCAAGA                 CGGG GTT CCTG                 CTGTGCTGCTGGCTC  42 145
    trd_0185  191272 ..  191320 - -17.5  -3.03243   ACGTACGCTCGAACA GCCGATCCGG-ACGGCCAGGTG GGATCT CACCTGGCCGTTCCATTTCGGC GCACTTTCGAGCGGA  88 3
   trd_A0207  189887 ..  189899 -  -6.2  -3.16564   GGGGGATCGCAGGAA                GCCG TCTCT CGGC                TCTCCTGATACGGTG  49 215
   trd_A0206  189176 ..  189189 -  -2.3  -3.12351   TCGGCGGACAGCCAA               GGAAG TGTT CATCC                CGCTGACGGTCGGTG  42 407
   trd_A0202 NONE
   trd_A0201  183352 ..  183362 -  -2.4  -2.55544   TGATCAGCGAAGCGA                 TCCG GCG CGGT                 GCCGAGTTCGTGACG  38 102
   trd_A0200  181688 ..  181717 -  -5.5  -2.89683   AGTGGAGGGGAGACA       GGATGAGCACGCG TGTT CCCGCGCTCGACC        TGGTGAGTCACAGCC  47 223
   trd_A0196  179891 ..  179902 -  -5.8  -4.11216   GGGGGACCTCCAAAA                GCTC TGTC GAGC                 AAGTGGAGTGGCAGC  66 412
   trd_A0195 NONE
   trd_A0194 NONE
   trd_A0193 NONE
    trd_0169 NONE
   trd_A0192  173003 ..  173013 -  -8.2  -4.06904   GCATCGAATCAGAAA                 CGCG TTC CGCG                 CAGCCACGAGCGATC  72 1
   trd_A0191 NONE
   trd_A0190  171684 ..  171699 -  -3.2  -3.18264   TCGCCCAGCGAGGAA              TCATCC CGCG GGAGGA               TGCGCAGACGATCGC  45 49
   trd_A0188 NONE
   trd_A0186 NONE
    trd_0164 NONE
    trd_0163  168186 ..  168205 -  -7.2  -3.18912   GGATGCAGTGACCAA            CGGTC-TTC GGC GAACGACCG            ACATGGTGCGGGGCG  54 168
    trd_0161  167103 ..  167115 -  -3.3  -3.52192   TGCAAGTCGAGATAA                CCAGC ACA GCTTG                AGACACCCTCATCAT  49 235
    trd_0160 NONE
    trd_0159  166273 ..  166285 -  -2.6  -3.19602   TGTCTCAGATGAAGA                GCGA GACAT CCGC                ATCAGCTGCGAACTC  44 2
    trd_0158 NONE
    trd_0157 NONE
   trd_A0181 NONE
    trd_0156 NONE
    trd_0155 NONE
    trd_0154 NONE
    trd_0153  162036 ..  162065 -  -3.5  -3.25802   CATGAAACTGACGAA       GGGATTGCGCT TGGCTGGC AGTGCCATCCC        GCTGCTCCTTCCTGT  45 76
    trd_0152 NONE
    trd_0151 NONE
   trd_A0174 NONE
   trd_A0173 NONE
    trd_0150 NONE
   trd_A0172 NONE
    trd_0149 NONE
   trd_A0171 NONE
    trd_0148 NONE
   trd_A0170 NONE
   trd_A0168 NONE
    trd_0147 NONE
    trd_0146 NONE
    trd_0145 NONE
    trd_0144 NONE
    trd_0143 NONE
    trd_0142 NONE
   trd_A0163  153054 ..  153066 -  -3.3  -3.33744   CCGGTGGCTAAAAAG                CTCTC ACC GAGTG                TTCAGTCGACAGAAT  47 57
   trd_A0160 NONE
   trd_A0158 NONE
    trd_0141 NONE
    trd_0140 NONE
    trd_0139 NONE
         alr NONE
    trd_0138 NONE
    trd_0137 NONE
   trd_A0155 NONE
    trd_0136 NONE
   trd_A0154 NONE
   trd_A0153 NONE
    trd_0135  142291 ..  142307 -  -2.1  -3.10677   AACGAAGCCAGTGAA              GCATGGG TGC CCCCTGA              ACTACACTTGCAAAC  42 27
    trd_0134 NONE
    trd_0133 NONE
   trd_A0149 NONE
    trd_0132 NONE
   trd_A0146 NONE
    trd_0131 NONE
    trd_0130 NONE
    trd_0129 NONE
   trd_A0144 NONE
    trd_0127  133681 ..  133703 -  -4.6  -4.56597   CGGCGGTCTCAAAAA           CCGCTGGGGG CGA CCCCGTGTGG           GTTCGAGTCCCACCT  74 74
   trd_A0142 NONE
   trd_A0141 NONE
   trd_A0139 NONE
    trd_0124 NONE
    trd_0123  129734 ..  129776 - -22.9  -3.16039   AAGCACCTCGACCAA TCGAGCGGGGGACAGCGTGA TGGA CCACGCTGCCCCCCGCT-GA CGGTCGGTTTGGGGA 100 56
    trd_0122  129347 ..  129381 -  -3.4  -3.53224   TAGCGGCCCGGCAAA     GTAGGGACGAGCGAGA TGC TCTCGACCTTCACGAC     TCACCTCCGCTGCGC  49 111
    trd_0121 NONE
   trd_A0134 NONE
    trd_0120 NONE
    trd_0119 NONE
   trd_A0131  125705 ..  125722 -  -2.6  -3.74693   TTGTACCCGAGGAAA             CGCGGT GTATCG ACCCCG              TAGGTGGATCCGTTC  53 7
    trd_0118 NONE
   trd_A0130 NONE
   trd_A0127 NONE
    trd_0117 NONE
    trd_0116 NONE
   trd_A0125  121341 ..  121364 -  -7.4  -2.83822   CGCACCGCAGAACGA          TCGCCGACCCG GTT CGTGT-GGCGA          GTCCTCGTCGATCCT  52 14
   trd_A0124 NONE
    trd_0115  120395 ..  120421 - -10.1  -2.79321   TCGACAGCAACAGCA         GGCGATCGGTG CAGAC CACCGACCGGC         ACCAGGCAACTGTAG  60 419
        rpsP NONE
    trd_0113 NONE
        rimM  119042 ..  119062 -  -6.7  -2.76696   GTCGCCGCCAAGAAC            GGCGAGCCC GAG GCGATCGCC            CAGGAAGCAGCCGAT  48 127
   trd_A0120  115537 ..  115573 -  -6.6  -2.78547   GGACGCGATGAACGA   GGCGATCCGCGAC-TGGG TCA CCAACGT-GCGGACCACC   TATTATCTCGTGGGG  48 32
   trd_A0118 NONE
   trd_A0117 NONE
   trd_A0116 NONE
         crm  110886 ..  110903 -  -2.7  -2.90075   GCTCGCCCAAGCATA             CGCT-GAC GCG GTCGAACG             GATCGAGCGGTTGGT  40 7
         cmr NONE
    trd_0101 NONE
         cmr NONE
         cmr NONE
   trd_A0111 NONE
    trd_0100 NONE
    trd_0099 NONE
   trd_A0110  106143 ..  106163 -  -3.1  -3.37344   GGCCGAGCCAAGCAA            CCCCTCTTC AGC GCCGAGGAG            CGTCGTTTTTTGGCC  47 43
    trd_0093 NONE
    trd_0092 NONE
        prfA  101856 ..  101875 -  -2.8  -3.01712   TCGCTCGGCGCAAGA            CGTCGCGCA ACG TGAGC-ACG            GGCCCGCTCAGTCGA  42 33
    trd_0090  100981 ..  101002 -  -8.7  -3.92602   CGAACACTCTACAAA           GAGGCT-CGC GAG GCGTAGCCCC           TGCCTCGGCAGGCTG  69 46
    trd_0088 NONE
    trd_0087 NONE
    trd_0085   97272 ..   97285 -  -3.7  -3.63515   TGGGACGGCGAACAA               GGCGC AGAT GCGCT                GCCGGTTCTGCGGGT  53 395
    trd_0083 NONE
    trd_0082   91750 ..   91805 - -30.1  -2.90496   GTCGGTCTCAAACGA GACCGAGAGGCGAG-CCA-GACGGATC GACC GACCCGTCGTGGTCTCGCCTCTCGGTC TCGCTCGGCCGAGGG 100 417
    trd_0081   90728 ..   90745 -  -4.1  -3.73968   AAACCGGGCAGCAAA             GCGAGCCG ATT CAG-TCGC             GCGGCGGTACTTCGA  56 18
    trd_0079 NONE
   trd_A0101   89531 ..   89560 -  -4.2  -3.57792   CTACCGAGCCGGAAA       CGGGTCAGACGCT CCAGC AGCG-CTGGCGCG       AGGCCGGTTTGACGA  53 47
   trd_A0100   87833 ..   87857 -  -3.5  -3.04461   CATCGAGCCGCAAGA          GCACGAGTATC CCC GGTACTCATCC          AGGAGATCGCTTTAT  43 358
    trd_0078   86351 ..   86371 -  -3.1  -3.63694   ACCCATCCGCAAGAA            CCCGACTTC TTC GTCGTCGGA            CTCAAGAGCTATGGG  51 437
   trd_A0095 NONE
    trd_0074 NONE
   trd_A0094 NONE
   trd_A0093 NONE
   trd_A0092   80907 ..   80921 -  -5.6   -3.1211   CAGGAGATCATCGAA               CAGGCG CTG CGTCTG               GCTAATGCAGTGGGG  49 23
         trx   79358 ..   79393 - -16.8  -4.36914   TTGCTCCGGAGAAAA    CGCTGACGCGACCGGA CAAT CCCGGTCGCGTCGGAG     GGAAGTGGCTGGTCC 100 45
   trd_A0090   78363 ..   78387 -  -3.6  -3.60006   AAGGAGACGCGGAAA          CCGAGTTC TCATCACTC GAACTCGA          CCTTCCACGGCACTG  51 58
   trd_A0089   75585 ..   75599 -  -2.7  -2.92026   GAGGTCAATACGATA               CCCGG GTTCA CCGCG               ATCTCCATGTATCCC  41 73
   trd_A0088   75219 ..   75230 -  -7.2  -3.72576   GTCGGCGTGAGCAAA                GCGC GCAG GCGC                 GAGGAGCTTCTGGCC  62 172
   trd_A0084 NONE
   trd_A0083   71406 ..   71431 -  -8.3  -3.59262   TCGGAGATGGCCAAA         CTCGCCCTGGTA CTT TACCTGG-CGAG         TTGGTTGGCGAGCAA  65 75
   trd_A0082   69995 ..   70008 -  -3.7  -3.10464   GCACCAAGGGCAAGA               CGACG ACCG CGACG                CTCTGCGCAGCTATT  45 3
   trd_A0081 NONE
   trd_A0080 NONE
   trd_A0079 NONE
   trd_A0078 NONE
   trd_A0077 NONE
   trd_A0076 NONE
   trd_A0075 NONE
   trd_A0074 NONE
    trd_0054 NONE
   trd_A0073 NONE
    trd_0053 NONE
   trd_A0072   61325 ..   61360 - -10.3  -2.71268   CCTGACCAGACACCA    CGGGTGCACGCGACC GAGCGT GGTCGCCTGCTCGCG     ACTGCGCTCCAACTG  59 17
   trd_A0071 NONE
   trd_A0070   58904 ..   58952 -  -6.6  -2.82623   TCCCGGCGACAAGGA GACGGCCCGGGTGCTCGCCGAGC GCTG GGTCGCTGAGCACCCGGAA-ATC ATCGAACGAGGACAG  49 370
   trd_A0069 NONE
   trd_A0068 NONE
   trd_A0067 NONE
   trd_A0066 NONE
   trd_A0064 NONE
   trd_A0063 NONE
    trd_0048   51316 ..   51335 -  -9.2  -3.05596   CAGCCGGTGATCGAA            CGCGGGTG GCAT CACACGCG             TTCCTTCAGCTGGAC  60 31
    trd_0047   50433 ..   50470 -  -9.2  -3.21276   CGGGTGGGGAGAACA  GCTCGCCGGCT-GCCAGC GTAG GCTGGCGAGCCT-CGAAC   GCGTTACAATCCGGC  62 239
   trd_A0055   44870 ..   44880 -  -2.4  -3.86015   TATCGCGTGGACAAA                 CTGC TCC GCTG                 CCCGCAGCCACCAGC  55 54
   trd_A0054   44133 ..   44147 -  -4.2  -3.70902   CTGGTCACATCCAAA               CGCG CGCGGTC CGCG               ATGGCGACAGTTACA  56 110
    trd_0037   42599 ..   42630 -  -4.3  -4.18018   GCGCCGGATGGAAAA      GGTCGCGCAGCTG TCGTGC CAGGTCCGCGAAC       TCTGGGCAGTCAGTA  62 259
    trd_0034   40760 ..   40797 -  -2.4  -2.77658   GAGCAGACGGAAGGA   CGGGGACGAGAGGGCC GGCGCT GGCTCGCTCCACCCGG    AACCTCGCTGCTCTT  38 403
    trd_0028 NONE
   trd_A0033 NONE
    trd_0027 NONE
   trd_A0032 NONE
    trd_0026 NONE
   trd_A0031 NONE
    trd_0025 NONE
        fliL   26635 ..   26670 -  -2.6  -4.78237   GATCGGACAAGAAAA   GTTTGCTCCCG-GGGGA ACGAG TCCCCACGGGAGCG--C   GAGAGGAGGGAGGGT  74 17
   trd_A0029 NONE
    trd_0023 NONE
   trd_A0028   25270 ..   25291 -  -5.8  -3.21099   CGCTTGCAGCAGGAA           CTCGAGCG GACCAT CGATCGAG            AGAACGACAGTGTCC  51 19
   trd_A0027   24150 ..   24166 -    -8  -3.77832   CTGGAAACGGAAGAA              GGCAAG CGCTT CTTGCC              GGTCGAGCAGGTGAG  65 467
   trd_A0019 NONE
   trd_A0018 NONE
   trd_A0017 NONE
   trd_A0016 NONE
    trd_0014   14622 ..   14632 -  -2.4  -3.31269   GGTATAGCACAGGAA                 CCCG ATC CTGG                 TCATGGCCGCTTTCG  45 52
   trd_A0015 NONE
    trd_0013 NONE
   trd_A0014 NONE
    trd_0012   12742 ..   12754 -  -4.8  -3.23393   TTTCACGCGACAATA                TCGC GACGA GCGA                AGGCGATTTGCGCGG  49 0
    trd_0011 NONE
   trd_A0012 NONE
   trd_A0010 NONE
    trd_0009    8006 ..    8040 -  -5.4  -3.76568   CGATGCAGAAGACAA     CGGCCAGCCGATCAGC GCG GCGGCTCGGCGGGAGG     AGCTGGGGCTCGCTC  58 476
    trd_0008 NONE
    trd_0006 NONE
   trd_A0006 NONE
   trd_A0005 NONE
    trd_0005 NONE
   trd_A0004 NONE
   trd_A0002 NONE
    trd_0003    1299 ..    1341 -  -8.4  -2.82516   GTTGGGAGGATGAGA CGCTGCTG-CCCGCTCGCCC GCTCG GAGCGGACGAGACAGC-GCG CCTCGCGGTGCTGAT  55 480
