locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Ta1368 Ta1368 1415727 1415996 + conserved hypothetical protein similarity to unknown protein: thioredoxin peroxidase (EC 1.11.1.-) TM0780 [similarity] - Thermotoga maritima (strain MSB8)%3B PIR:E72332. Relation: weak similarity to thiol-specific antioxidant protein - human%2C PIR2:I38341. gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0999 Ta0999 1069392 1069595 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MTH1031 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:F69004 gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0296 Ta0296 316313 317503 - probable Acetyl-CoA C-acetyltransferase strong similarity to known protein: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) [validated] - Clostridium acetobutylicum%3B PIR:JC4032 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0855 Ta0855 920639 921439 + hypothetical protein no similarity gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0243 Ta0243 251770 252093 + hypothetical protein no similarity gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1453 Ta1453 1500770 1501180 - hypothetical protein no similarity gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term= 826046 826118 + tRNA-Asn Predicted Asn tRNA (Anticodon GTT) tRNA rna16 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0125 Ta0125 118389 119051 + alkyl hydroperoxide reductase subunit f related protein similarity to known protein: ALKYL HYDROPEROXIDE REDUCTASE SUBUNIT F (EC 1.6.4.-) - Xanthomonas campestris (pv. phaseoli)%3B SWISSPROT:AHPF_XANCH gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1099 Ta1099 1169705 1170178 - conserved hypothetical protein similarity to unknown protein: hypothetical protein APE2177 - Aeropyrum pernix (strain K1)%3B PIR:D72525 gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0237 Ta0237 244417 245223 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:A72420 gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1329 Ta1329 1377220 1379049 - dipeptide ABC transport system%2C periplasmic dipeptide-binding protein dppA similarity to known protein: probable oligopeptide binding protein APPA - Pyrococcus horikoshii%3B PIR:B71130. Relation: similarity to probable oligopeptide binding protein appA - Pyrococcus horikoshii%2C PIR:B71130. gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1388 Ta1388 1434396 1435001 - hypothetical protein weak similarity to unknown protein gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0532 Ta0532 561457 561861 - hypothetical protein no similarity gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1460 Ta1460 1505905 1506477 + conserved hypothetical protein similarity to unknown protein gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0653 Ta0653 686915 687655 + S-adenosyl-L-methionine uroporphyrinogen methyltransferase related protein similarity to known protein: uroporphyrin-III C-methyltransferase (EC 2.1.1.107) [validated] - Methanobacterium ivanovii%3B PIR:A42471 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0782 Ta0782 826496 827818 + inorganic phosphate transport protein related protein similarity to known protein: Arabidopsis thaliana DNA for inorganic phosphate transporter%2C complete cds%3B TREMBL:AB005746_1 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0958 Ta0958 1025902 1026255 - hypothetical protein no similarity gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0582 Ta0582 611823 612989 - acetyl-CoA acetyltransferase related protein strong similarity to known protein: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) [validated] - Clostridium acetobutylicum%3B PIR:JC4032 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0229 Ta0229 233490 235349 - acetyl-CoA synthetase related protein similarity to known protein: acetate--CoA ligase (EC 6.2.1.1) - Emericella nidulans%3B PIR:SYASAA gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0428 Ta0428 456449 456763 + biphenyl dioxygenase%2C Rieske iron-sulfur component related protein similarity to known protein: biphenyl dioxygenase (EC 1.14.12.-) Rieske iron-sulfur component - Pseudomonas sp.%3B PIR:E41858 gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1214 Ta1214 1283223 1283783 - thymidine kinase related protein similarity to known protein: Canarypox virus gene for thymidine kinase and 8 ORFs%2C partial and completecds%3B TREMBL:D86731_5 gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1451 Ta1451 1498281 1499654 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0851 - Archaeoglobus fulgidus%3B PIR:C69356 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1240 Ta1240 1305421 1305672 + small nuclear ribonucleoprotein related protein similarity to known protein: SMALL NUCLEAR RIBONUCLEOPROTEIN F (SNRNP-F) (SM PROTEIN F) (MEMBRANE-ASSOCIATED PROTEIN DEB-B) - Drosophila melanogaster (Fruit fly)%3B SWISSPROT:RUXF_DROME gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0767 Ta0767 807989 808198 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF1072 - Archaeoglobus fulgidus%3B PIR:H69383 gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1097 Ta1097 1167692 1168303 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:D72242 gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0751 Ta0751 794681 795364 - hypothetical protein weak similarity to unknown protein gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0051 Ta0051 49986 50312 - hypothetical protein weak similarity to known protein. Relation: weak similarity to SWISSPROT:HIS9_YEAST. gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1301 Ta1301 1348912 1349736 - membrane protein 7%2C erythrocyte (human) related protein similarity to known protein: membrane protein 7%2C erythrocyte - human%3B PIR2:S17659 gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1508 Ta1508 1561593 1563179 - probable SA protein strong similarity to known protein: Mus musculus SA mRNA%2C complete cds%3B TREMBL:AB022340_1 gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0737 Ta0737 777868 779649 - conserved hypothetical protein similarity to unknown protein: probable ATP/GTP binding protein - Streptomyces coelicolor%3B PIR:T29128Function: probably ATP/GTP binding. gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0713 Ta0713 756284 756700 + hypothetical protein no similarity gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1292 Ta1292 1343335 1344045 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1551 - Pyrococcus horikoshii%3B PIR:G71032 gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0412 Ta0412 438736 439263 - hypothetical membrane protein weak similarity to known protein. Relation: weak similarity to AQUAPORIN 9%2C Rattus norvegicus%2C SWISSPROT:AQP9_RAT. gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1198 Ta1198 1268019 1268879 - 4-hydroxybenzoate octaprenyl transferase related protein similarity to known protein: 4-hydroxybenzoate octaprenyltransferase (EC 2.5.1.-) - Escherichia coli%3B PIR:JC2316Function: ubiquinone biosynthesis. gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0651 Ta0651 685572 686156 + conserved hypothetical protein weak similarity to unknown protein gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1341 Ta1341 1390752 1392161 - mercuric reductase related protein similarity to known protein: mercury(II) reductase (EC 1.16.1.1) - Staphylococcus aureus plasmid pI258%3B PIR:E29504 gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0939 Ta0939 1007183 1008073 - hypothetical protein weak similarity to unknown protein gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0239 Ta0239 246428 248257 - probable urocanate hydratase strong similarity to known protein: urocanate hydratase (EC 4.2.1.49) [validated] - white clover%3B PIR:S29246 gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1373 Ta1373 1418906 1420039 - transport protein mmlH related protein similarity to known protein: Ralstonia eutropha mmlH%2C mmlI %26 mmlJ genes%3B TREMBL:AEMML_1 gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1320 Ta1320 1367874 1368467 - conserved hypothetical protein weak similarity to known protein. Relation: weak similarity to probable methyltransferase - Staphylococcus aureus%2C SWISSPROT:PRMA_STAAU. gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1118 Ta1118 1186416 1186916 + hypothetical protein no similarity gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0419 Ta0419 445165 446052 + conserved hypothetical protein strong similarity to unknown protein: morphine 6-dehydrogenase homolog PAB2329 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75188 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0062 Ta0062 58883 59722 - conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein AF1952 - Archaeoglobus fulgidus%3B PIR:G69493 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1323 Ta1323 1370890 1372341 - probable beta-galactosidase strong similarity to known protein: beta-galactosidase (EC 3.2.1.23) - Sulfolobus solfataricus%3B PIR:S06762. Relation: Beta-glycosidase scop domains score better than beta-galactosidase domains%2C thus the protein may be a beta-glycosidase. Title and functional predictions follow the closest experimentally characterized homolog%2C therefore beta-galactosidase attributes prevail.. gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0664 Ta0664 697485 699236 - hypothetical protein similarity to known protein: acylaminoacyl-peptidase (EC 3.4.19.1) - human%3B PIR1:JC4655 gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1466 Ta1466 1513880 1514857 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB0577 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75132 gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0860 Ta0860 925242 926081 + hypothetical protein similarity to known protein: dolichol-phosphate mannosyltransferase PAB2307 - Pyrococcus abyssi (strain Orsay)%3B PIR:G75191ORF_prediction: This proteins N-terminus appears short compared to that of related proteins. However%2C the start of thos proteins are very different%2C Codon usage and frequency of rare codons more likely suggest the later start currently suggested for this ORF.. gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1376 Ta1376 1421025 1421591 - hypothetical protein weak similarity to known protein gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0705 Ta0705 748438 748692 - hypothetical protein weak similarity to unknown protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0425 Ta0425 450693 453683 - formate dehydrogenase related protein similarity to known protein: formate dehydrogenase (EC 1.2.1.2) H (hydrogenase-linked) - Escherichia coli%3B PIR1:DEECFS gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1355 Ta1355 1403791 1404282 - hypothetical protein no similarity. Relation: weak similarity to M protein (fibrinogen binding) - Streptococcus equi%2C TREMBL:AF012927_1. gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0513 Ta0513 543198 543482 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB0376 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75173 gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0332 Ta0332 353191 353976 + purine-nucleoside phosphorylase related protein similarity to known protein: purine-nucleoside phosphorylase (EC 2.4.2.1) - bovine%3B PIR2:S66203 gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1102 Ta1102 1171289 1174711 - hypothetical membrane protein weak similarity to unknown protein gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0293 Ta0293 313491 313889 + conserved hypothetical protein similarity to unknown protein: hypothetical protein c0116 - Sulfolobus solfataricus%3B PIR:S74052 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1484 Ta1484 1535596 1536891 - cytochrome bd-type quinol oxidase subunit I related protein similarity to known protein: Bacillus stearothermophilus genes for bd-type quinol oxidase subunit I andsubunit II%2C complete cds%3B TREMBL:AB016894_1 gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0996 Ta0996 1066971 1067741 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MJ0279 - Methanococcus jannaschii%3B PIR:H64334 gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1194 Ta1194 1264671 1265657 + conserved hypothetical protein similarity to unknown protein: hypothetical protein MJ1030 - Methanococcus jannaschii%3B PIR:E64428Function: fusion of two conserved hypothetical proteins%2C i.e. PIR:E64428 and AE000941.1 in Methanococcus jannaschii. gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0282 Ta0282 299776 301008 - 3-phosphoshikimate 1-carboxyvinyltransferase related protein similarity to known protein: 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE (EC 2.5.1.19) (5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE) (EPSP SYNTHASE) (EPSPS) - Haemophilus somnus%3B SWISSPROT:AROA_HAESO gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1085 Ta1085 1157426 1158658 - multidrug-efflux transporter related protein similarity to known protein: norA protein - Staphylococcus aureus%3B PIR:A37838 gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0873 Ta0873 938647 939861 - membrane bound polysaccharide synthase related protein similarity to known protein: polysaccharide%3B S.pneumoniae dexB%2C cap3A%2C cap3B and cap3C genes and orfs%3B TREMBL:SPDEXCAP_5 gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1197 Ta1197 1267185 1267943 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MJ0558 - Methanococcus jannaschii%3B PIR:F64369 gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1073 Ta1073 1146190 1147359 + probable sulfolipid biosynthesis protein strong similarity to known protein: sulfolipid biosynthesis protein SQD1%2C chloroplast [validated] - Arabidopsis thaliana%3B PIR:T05311 gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0624 Ta0624 656797 657153 + hypothetical protein no similarity gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1411 Ta1411 1462208 1462708 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1469 - Pyrococcus horikoshii%3B PIR:H71021 gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1449 Ta1449 1496503 1496575 + tRNA-Phe Predicted Phe tRNA (Anticodon GAA) tRNA gene1419 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0646 Ta0646 680122 681738 + acyl-CoA dehydrogenase related protein similarity to known protein: ACYL-COA DEHYDROGENASE (EC 1.3.99.-) - Bacillus subtilis%3B SWISSPROT:ACDB_BACSU gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0023 Ta0023 20507 20944 + hypothetical protein weak similarity to known protein. Relation: weak similarity to TREMBL:MMPTPN13_1. gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1210 Ta1210 1277657 1278982 - alpha%2C alpha-trehalose-phosphate synthase (UDP-forming) related protein similarity to known protein: alpha%2C alpha-trehalose-phosphate synthase (UDP-forming) (EC 2.4.1.15) - Escherichia coli%3B PIR:I83402 gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0194 Ta0194 195657 196250 + hypothetical protein weak similarity to known protein. Relation: weak similarity to 2%2C 6-dioxo-6-phenylhexa-3-enoate hydrolase (EC 3.7.1.8) - Pseudomonas putida%2C PIR1:C35124. gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0544 Ta0544 576217 576699 + conserved hypothetical protein similarity to unknown protein: HYPOTHETICAL PROTEIN HI0621.1 - Haemophilus influenzae%3B SWISSPROT:YAED_HAEINFunction: possibly involved in histidine synthese. gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0450 Ta0450 476931 478784 + DNA polymerase (PolB) related protein similarity to known protein: DNA-directed DNA polymerase (EC 2.7.7.7) - Sulfolobus solfataricus%3B PIR:S34120 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1188 Ta1188 1258402 1259490 - multidrug resistance protein NorA related protein similarity to known protein: Staphylococcus aureus norA23 gene for NorA%2C complete cds%3B TREMBL:AB019536_1 gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0746 Ta0746 789638 790975 + sugar transport protein related protein similarity to known protein: inositol transport protein iolF - Bacillus subtilis%3B PIR:F69645 gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0128 Ta0128 121680 122564 + inner membrane protein of trehalose/maltose (MalG) related protein similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes%2C complete cds%3B TREMBL:AF012836_3 gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0915 Ta0915 985320 986153 - chorismate mutase/prephenate dehydratase related protein similarity to known protein: Pseudomonas stutzeri gyrase A subunit (gyrA) gene%2C partial cds%3B3-phosphoserine aminotransferase (serC)%2C chorismate mutase/prephenatedehydratase (aroQp/pheA)%2C imidazole acetol phosphate aminotransferase(hisHb)%2C and cyclohexadienyl dehydrogenase (tyrAc) genes%2C complete cds%3B and5-enolpyruvylshikmate 3-P synthase (aroF) gene%2C partial cds%3B TREMBL:AF038578_3 gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0291 Ta0291 309768 311744 + L-3-hydroxyacyl-CoA dehydrogenase precursor related protein similarity to known protein: Rattus norvegicus L-3-hydroxyacyl-CoA dehydrogenase precursor (HAD) mRNA%2C complete cds%3B nuclear gene for mitochondrial product%3B TREMBL:AF095449_1 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1138 Ta1138 1209584 1210444 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1179 - Archaeoglobus fulgidus%3B PIR:B69397 gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1217 Ta1217 1286721 1286891 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PHS027 - Pyrococcus horikoshii%3B PIR:F71080 gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1340 Ta1340 1389648 1390796 + transport membrane protein (permease) related protein weak similarity to unknown protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1021 Ta1021 1091330 1091926 + hypothetical protein no similarity gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1311 Ta1311 1359143 1360690 - probable Histone and other Protein Acetyltransferase (yeast HPA1) strong similarity to known protein: histone acetyltransferase (EC 2.3.1.48)%2C RNA polymerase II-associated [validated] - yeast (Saccharomyces cerevisiae)%3B PIR2:S61980 gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0677 Ta0677 714535 714900 + hypothetical membrane protein weak similarity to known protein. Relation: weak similarity to UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC 2.7.8.15) - Sulfolobus solfataricus%3B PIR2:S75428. gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0172 Ta0172 176979 178040 + hemin permease (hemU) related protein similarity to known protein: Y.enterocolitica hemS%2C hemT%2C hemU and hemV genes%3B TREMBL:YEHEMSTUV_3 gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0008 Ta0008 6975 8888 + A1AO H+ ATPase%2C subunit I related protein similarity to known protein: Methanosarcina mazeii A1AO H+ ATPase%2C subunits H-G (ahaH-ahaG) genes andhydrogenase assembly (hypF) gene%2C complete cds%3B TREMBL:MM47274_2 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0594 Ta0594 626146 626763 - phosphoribosylamide-glycine ligase related protein similarity to known protein: phosphoribosylamine--glycine ligase (EC 6.3.4.13) - Methanococcus jannaschii%3B PIR:A64417 gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0460 Ta0460 487669 488640 + endonuclease V related protein similarity to known protein: ENDONUCLEASE V (EC 3.1.-.-) (DEOXYINOSINE 3'ENDONUCLEASE) - Escherichia coli%3B SWISSPROT:NFI_ECOLIFunction: Endonuclease V is specific for single-stranded DNA or for duplex DNA that contains uracil or that is damaged by a variety of agents (B. Demple and S. Linn%2C J. Biol. Chem. 257:2848-2855%2C 1982). . ORF_prediction: This ORF has an N-terminal extension compared to related endonuclease V proteins of about 110 amino acids. Neither codon usage nor frequency of rare codons suggest a later start of the ORF.. gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0127 Ta0127 120730 121644 + inner membrane protein of trehalose/maltose (malF) related protein similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes%2C complete cds%3B TREMBL:AF012836_2 gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term= 413604 413677 + tRNA-Lys Predicted Lys tRNA (Anticodon TTT) tRNA rna9 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1488 Ta1488 1539365 1540252 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein AF2031 - Archaeoglobus fulgidus%3B PIR:F69503 gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1199 Ta1199 1268916 1270358 - 4-hydroxybenzoate decarboxylase related protein similarity to known protein: Clostridium hydroxybenzoicum 4-hydroxybenzoate decarboxylase (ohb1) gene%2C complete cds%3B TREMBLNEW:AF128880_1Function: Phenylalanine metabolism. gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1409 Ta1409 1460785 1461492 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein APE2034 - Aeropyrum pernix (strain K1)%3B PIR:D72507ORF_prediction: The N-terminus apparently is about 50 amino acids longer than those ones of related sequences. We propose this start due to the significantly good codon usage in the N-terminal part of this ORF.. gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1245 Ta1245 1308883 1309449 - probable cytidylate kinase strong similarity to known protein: CYTIDYLATE KINASE (EC 2.7.4.14) (CK) (CYTIDINE MONOPHOSPHATE KINASE)(CMP KINASE).CYTIDYLATE KINASE (EC 2.7.4.14) (CK) (CYTIDINE MONOPHOSPHATE KINASE)(CMP KINASE) - Sulfolobus acidocaldarius.Sulfolobus acidocaldarius%3B SWISSPROT:KCY_SULAC gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0217 Ta0217 220168 221265 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE0252 - Aeropyrum pernix (strain K1)%3B PIR:C72783 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1081 Ta1081 1152995 1154968 - ATP-dependent proteinase La (Lon) related protein similarity to known protein: endopeptidase La homolog (EC 3.4.21.-)lonB - Bacillus subtilis%3B PIR:G69652 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0093 Ta0093 89546 89818 - DNA-binding protein HTa known protein: DNA-binding protein - Thermoplasma acidophilum%3B PIR:DNYTXA gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1276 Ta1276 1328723 1330354 - thermosome beta chain known protein: thermosome beta chain - Thermoplasma acidophilum%3B PIR:S53817 gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0969 Ta0969 1034851 1035300 - probable NADH dehydrogenase%2C chain B strong similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain NQO6 - Thermus aquaticus thermophilus%3B PIR:T11899 gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0314 Ta0314 335500 336183 + hypothetical membrane protein no similarity gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0248 Ta0248 254688 255767 - conserved hypothetical protein strong similarity to unknown protein gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0937 Ta0937 1005277 1006665 - prolyl-tRNA synthetase related protein similarity to known protein: phosphoserine phosphatase (EC 3.1.3.3) - yeast (Saccharomyces cerevisiae)%3B PIR:S53931 gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0740 Ta0740 781583 782245 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0626 - Archaeoglobus fulgidus%3B PIR:B69328 gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1032 Ta1032 1104787 1105386 - probable 30S ribosomal protein S4 strong similarity to known protein: ribosomal protein S4 [similarity] - Haloarcula marismortui%3B PIR:B44126 gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0431 Ta0431 459165 459383 - DNA-directed RNA polymerase%2C chain N related protein similarity to known protein: DNA-DIRECTED RNA POLYMERASE II 7.6 KDA POLYPEPTIDE (EC 2.7.7.6)(RPB10) (RPB7.6) - Homo sapiens (Human)%3B SWISSPROT:RPBX_HUMAN gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0908 Ta0908 979927 980412 - hypothetical protein questionable ORF gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1335 Ta1335 1384929 1385474 + hypothetical protein weak similarity to unknown protein gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0261 Ta0261 269487 271733 + hypothetical protein no similarity gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0005 Ta0005 4410 5840 + probable ATP synthase (subunit B) strong similarity to known protein: ATP synthase%2C subunit B - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:F69227 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0956 Ta0956 1025303 1025635 + hypothetical protein weak similarity to known protein. Relation: weak similarity to homoserine dehydrogenase. gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0021 Ta0021 18709 19611 + histidinol-phosphate aminotransferase related protein similarity to known protein: HISTIDINOL-PHOSPHATE AMINOTRANSFERASE (EC 2.6.1.9) (IMIDAZOLE ACETOL-PHOSPHATE TRANSAMINASE) - Salmonella typhimurium%3B SWISSPROT:HIS8_SALTY gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0792 Ta0792 842729 843790 - carbamoyl phosphate synthetase small subunit related protein similarity to known protein: carbamoyl-phosphate synthase%2C small (or glutamine) subunit (carA) homolog - Archaeoglobus fulgidus%3B PIR:H69408Function: Urea cycle and metabolism of amino groups%2C Glutamate metabolism%2C Arginine and proline metabolism%2C Nitrogen metabolism. gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1386 Ta1386 1431956 1432756 + hypothetical protein no similarity gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1406 Ta1406 1457987 1459024 - hypothetical membrane protein weak similarity to known protein. Relation: weak similarity to Galacturonic acid uptake protein exuT%2C Erwinia chrysanthemi%2C TREMBL:U86689_1. gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0137 Ta0137 133028 134278 - conserved hypothetical protein similarity to unknown protein: transport protein homolog [imported] - Arthrobacter sp. (strain TE1826)%3B PIR:T44249 gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1156 Ta1156 1227920 1228900 + hypothetical membrane protein no similarity gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0420 Ta0420 446058 446663 - conserved hypothetical membrane protein similarity to unknown protein: protein yaaH - Escherichia coli%3B PIR:E56688 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1059 Ta1059 1131081 1131470 - translation initiation factor eIF-5a related protein similarity to known protein: translation initiation factor eIF-5A.1 [validated] - yeast (Saccharomyces cerevisiae)%3B PIR:FIBYA1 gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0710 Ta0710 754207 755259 + hypothetical protein weak similarity to known protein. Relation: weak similarity to ss-1%2C 4-galactosyltransferase - Streptococcus pneumoniae%3B TREMBL:SPCPS14E_11. gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1325 Ta1325 1373446 1374342 - probable oligopeptide ABC transport system%2C ATP-binding protein appD strong similarity to known protein: probable oligopeptide transport ATP-binding protein appD - Pyrococcus horikoshii%3B PIR2:G71211. Relation: strong similarity to probable oligopeptide transport ATP-binding protein appD - Pyrococcus horikoshii%2C PIR2:G71211. gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1078 Ta1078 1150809 1151873 + aspartate aminotransferase related protein similarity to known protein: ASPARTATE AMINOTRANSFERASE (EC 2.6.1.1) (TRANSAMINASE A) (ASPAT) - Sulfolobus solfataricus%3B SWISSPROT:AAT_SULSO gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1207 Ta1207 1274675 1275649 + hypothetical protein no similarity gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0484 Ta0484 515402 517087 - cellulose synthase%2C subunit A related protein similarity to known protein: Agrobacterium tumefaciens celA%2C celB%2C celC%2C celD%2C celE genes%2C completeCDSs%3B fixR gene%2C partial CDS%3B TREMBL:ATCELABCE_7 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1100 Ta1100 1170144 1170686 - probable phenylacrylic acid decarboxylase strong similarity to known protein: phenylacrylic acid decarboxylase - yeast (Saccharomyces cerevisiae)%3B PIR:S62017 gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0346 Ta0346 368492 368845 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Lactococcus lactis plasmid pMRC01%3B PIR:T43118 gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0443 Ta0443 470398 471372 - molybdopterin biosynthesis protein moaA related protein similarity to known protein: MOLYBDOPTERIN BIOSYNTHESIS CNX2 PROTEIN (MOLYBDENUM COFACTORBIOSYNTHESIS ENZYME CNX2) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:CNX2_ARATH gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0429 Ta0429 456797 458491 + electron transfer flavoprotein%2C alpha and beta subunits related protein similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum%3B SWISSPROT:ETFA_CLOAB. Relation: the first part of the gene is similar to ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT%2C SWISSPROT:ETFB_CLOAB. gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0852 Ta0852 917503 918270 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:G72340 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0060 Ta0060 56313 57788 + purH bifunctional enzyme related protein similarity to known protein: purH bifunctional enzyme - Escherichia coli%3B PIR:DTECPH gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0496 Ta0496 526773 527231 - hypothetical protein no similarity gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0940 Ta0940 1008566 1009504 - transcription initiation factor IIB related protein similarity to known protein: transcription initiation factor IIB [validated] - human%3B PIR:TWHU2B gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0270 Ta0270 279864 281978 + sporulation protein (spo0KD) related protein similarity to known protein: Bacillus subtilis spo0K operon%3B TREMBL:BSSPOOK_5 gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1092 Ta1092 1163662 1163958 + ribosomal protein S24 related protein similarity to known protein: ribosomal protein S24.e%2C cytosolic - yeast (Saccharomyces cerevisiae)%3B PIR:S48410 gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0525 Ta0525 553793 554443 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1257 - Pyrococcus horikoshii%3B PIR:E71070 gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0351 Ta0351 373158 374471 + sterol carrier protein x/sterol carrier protein 2 related protein similarity to known protein: sterol carrier protein x - mouse%3B PIR2:JU0157 gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1241 Ta1241 1305669 1305833 + probable ribosomal protein L37 strong similarity to known protein: ribosomal protein L37.e.A%2C cytosolic - yeast (Saccharomyces cerevisiae)%3B PIR:S51430 gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0584 Ta0584 614245 614553 + hypothetical membrane protein no similarity gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0998 Ta0998 1068850 1069395 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH1068 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:G69008 gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0875 Ta0875 941122 941685 + conserved hypothetical membrane protein similarity to unknown protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1413 Ta1413 1463313 1464449 - sulfide dehydrogenase related protein similarity to known protein: Schizosaccharomyces pombe sulfide dehydrogenase (hmt2) gene%2C complete cds%3B TREMBL:AF042283_1 gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1382 Ta1382 1428108 1428653 - conserved hypothetical protein strong similarity to unknown protein: acetyl transferase PAB2081 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75155. Relation: weak similarity to SPERMIDINE N1-ACETYLTRANSFERASE (EC 2.3.1.57)%2C E. coli%2C SWISSPROT:ATDA_ECOLI. gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1462 Ta1462 1507150 1509723 - penicillin amidase precursor related protein similarity to known protein: penicillin amidase (EC 3.5.1.11) precursor - Providencia rettgeri%3B PIR:A56681Function: Lysine degradation. gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term= 563036 563108 + tRNA-Pro Predicted Pro tRNA (Anticodon CGG) tRNA rna13 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0280 Ta0280 295309 298086 + hypothetical membrane protein no similarity gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0904 Ta0904 973138 974337 + export type III nucleotide binding protein (Vir B11) related protein similarity to known protein: Helicobacter pylori export type III nucleotide binding protein (virB11)%2C ATPase (fliI) and membrane protein (fliQ) genes%2C complete cds%3B TREMBL:U75584_1 gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0436 Ta0436 461932 462900 + bifunctional short chain isoprenyl diphosphate synthase related protein similarity to known protein: BIFUNCTIONAL SHORT CHAIN ISOPRENYL DIPHOSPHATE SYNTHASE [INCLUDES:FARNESYL PYROPHOSPHATE SYNTHETASE (EC 2.5.1.1) (FPP SYNTHETASE)(DIMETHYLALLYLTRANSFERASE)%3B GERANYLTRANSTRANSFERASE (EC 2.5.1.10)] - Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133)%3B SWISSPROT:IDSA_METTM gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0776 Ta0776 817710 818969 - probable glutamate dehydrogenase strong similarity to known protein: GLUTAMATE DEHYDROGENASE (EC 1.4.1.3) (GDH) - Pyrococcus horikoshii%3B SWISSPROT:DHE3_PYRHO gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0871 Ta0871 936646 937761 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Deinococcus radiodurans (strain R1)%3B PIR:E75577 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0828 Ta0828 889123 889773 + conserved hypothetical protein weak similarity to unknown protein gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1450 Ta1450 1496760 1498280 - hypothetical protein weak similarity to known protein. Relation: weak similarity to peptide synthetase ppsE - Bacillus subtilis%2C PIR1:E69681. gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0216 Ta0216 218295 219902 - conserved hypothetical protein similarity to unknown protein: probable methyltransferase - Pyrococcus horikoshii%3B PIR:F71131 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0336 Ta0336 357766 358119 + conserved hypothetical protein strong similarity to unknown protein: hypothetical 17.7K protein - Thermoplasma acidophilum%3B PIR:T43256 gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1069 Ta1069 1142529 1143677 + multidrug resistance protein related protein similarity to known protein: TETRACYCLINE RESISTANCE PROTEIN%2C CLASS H (TETA(H)) - Pasteurella multocida%3B SWISSPROT:TCR8_PASMU gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0793 Ta0793 843851 845350 - multidrug resistance protein related protein similarity to known protein: multidrug resistance protein homolog - Archaeoglobus fulgidus%3B PIR:G69392 gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0589 Ta0589 621934 622161 + probable 30S ribosomal protein S17 strong similarity to known protein: ssu ribosomal protein s17e (rps17e) PAB7207 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75128 gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0301 Ta0301 323237 325588 - Tricorn protease interacting factor F2 known protein: Tricorn proteinase interacting factor F2 (EC 3.4.11.-) - Thermoplasma acidophilum%3B PIR:T37457 gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1165 Ta1165 1237365 1238639 - sugar transport related membrane protein similarity to known protein: inositol transport protein iolF - Bacillus subtilis%3B PIR:F69645 gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1247 Ta1247 1310145 1310696 - probable adenylate kinase strong similarity to known protein: ADENYLATE KINASE (EC 2.7.4.3) (ATP-AMP TRANSPHOSPHORYLASE) - Methanococcus igneus%3B SWISSPROT:KAD_METIG gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0809 Ta0809 861266 862747 + probable aldehyde dehydrogenase strong similarity to known protein: lactaldehyde dehydrogenase (EC 1.2.1.22) aldA - Escherichia coli%3B PIR:A38165Function: involved in ascorbate and aldarate metabolism%2C fatty acid metabolism%2C bile acid biosynthesis%2C valine%2C leucine and isoleucine degradation%2C arginine and proline metabolism%2C histidine metabolism and tryptophan metabolism%3B beta-Alanine metabolism%2C Glycerolipid metabolism%2C Pyruvate metabolism%2C Propanoate metabolism%2C Butanoate metabolism. gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1282 Ta1282 1336313 1337038 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1471 - Pyrococcus horikoshii%3B PIR:B71022 gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0056 Ta0056 51758 52273 - orotate phosphoribosyltransferase strong similarity to known protein: Pyrococcus abyssi orotate phosphoribosyltransferase (pyrE) gene%2C completecds%3B TREMBL:AF058713_1 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0486 Ta0486 517677 518366 + uridylate kinase related protein similarity to known protein: E.coli pyrH gene%3B TREMBL:ECPYRH_1 gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1268 Ta1268 1321074 1321775 - probable 50S ribosomal protein L2 strong similarity to known protein: ribosomal protein L2 [similarity] - Haloarcula marismortui%3B PIR:R5HS2L gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0177 Ta0177 181010 181297 - hypothetical protein weak similarity to unknown protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0603 Ta0603 634491 636038 + aldehyde dehydrogenase related protein similarity to known protein: aldehyde dehydrogenase (EC 1.2.-.-) - Bacillus stearothermophilus%3B PIR:I39769 gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0257 Ta0257 264539 265072 + leucine-responsive-regulatory protein related protein similarity to unknown protein: probable transcription regulator - Pyrococcus horikoshii%3B PIR:E71028 gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1347 Ta1347 1396972 1397616 - hypothetical protein weak similarity to known protein. Relation: weak similarity to 2%2C 3-pdg dependent phosphoglycerate mutase - Amycolatopsis methanolica%2C TREMBL:U73808_1. gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0610 Ta0610 641481 642884 - multidrug resistance protein related protein similarity to known protein: Bacillus subtilis DNA for multidrug transporter%2C complete cds%3B TREMBL:BSD0981_1 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0614 Ta0614 645765 646247 - hypothetical protein no similarity. Relation: weak similarity to PIR2:JC5393%2C but: 39.5%25 identity in 38 aa overlap%2C so i would say%2C there is no similarity. gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0461 Ta0461 488689 489843 - hypothetical protein no similarity gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0913 Ta0913 983260 983949 + conserved hypothetical protein weak similarity to known protein. Relation: weak similarity to PIR:A42468 (7alpha-hydroxysteroid dehydrogenase). gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0836 Ta0836 898916 899836 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB0505 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75117 gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1321 Ta1321 1368467 1368772 - hypothetical protein no similarity gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1328 Ta1328 1376177 1377199 - dipeptide transport system%2C permease protein (dppB) related protein similarity to known protein: probable oligopeptide transport system permease protein AppC - Pyrococcus horikoshii%3B PIR:C71163. Relation: similarity to probable oligopeptide transport system permease protein AppB - Pyrococcus horikoshii%2C PIR:C71163. gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0561 Ta0561 590237 593839 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein aq_854 - Aquifex aeolicus%3B PIR:B70374 gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0075 Ta0075 73220 74626 + COBYRIC ACID SYNTHASE related protein similarity to known protein: COBYRIC ACID SYNTHASE - Salmonella typhimurium%3B SWISSPROT:CBIP_SALTY gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1260 Ta1260 1317644 1318096 + hypothetical protein no similarity gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1151 Ta1151 1222738 1222932 + hypothetical protein no similarity gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0842 Ta0842 909875 910273 - hypothetical protein no similarity. Relation: weak similarity to FLP protein%2C a FNR-like transcriptional regulator protein - Lactococcus lactis%2C TREMBLNEW:LLA006749_1. gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1123 Ta1123 1191442 1192575 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:E72254 gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0188 Ta0188 190628 190987 - hypothetical protein no similarity gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0348 Ta0348 369547 370749 + conserved hypothetical membrane protein similarity to unknown protein: multidrug resistance protein PAB0146 - Pyrococcus abyssi (strain Orsay)%3B PIR:B75211. Relation: weak similarity to antiseptic resistance protein%2C staphylococcus aureus%2C SWISSPROT:QACA_STAAU. gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0069 Ta0069 67536 68138 - hypothetical protein no similarity gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0469 Ta0469 497773 499005 - probable adenosylhomocysteinase strong similarity to known protein: adenosylhomocysteinase (EC 3.3.1.1) [validated] - Sulfolobus solfataricus%3B PIR:S58193Function: S-Adenosyl-L-homocysteine + H2O %3D Adenosine + L-Homocysteine%3B involved in methionine metabolism and selenoamino acid metabolism. gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1168 Ta1168 1241103 1242248 + probable adenine specific DNA methyltransferase strong similarity to known protein: site-specific DNA methyltransferase (EC 2.1.1.-) - Caulobacter crescentus%3B PIR:S43876 gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1393 Ta1393 1439747 1440910 + conserved hypothetical protein similarity to unknown protein: probable altronate hydrolase C-terminus Cj0483 [imported] - Campylobacter jejuni (strain NCTC 11168)%3B PIR:F81393 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0773 Ta0773 813135 815024 - probable 2-oxoacid ferredoxin oxidoreductase%2C alpha chain strong similarity to known protein: 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain [validated] - Sulfolobus sp. (strain 7)%3B PIR:JC4919 gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0392 Ta0392 420195 421730 + probable DNA-directed RNA polymerase%2C chain A similarity to known protein: DNA-DIRECTED RNA POLYMERASE III LARGEST SUBUNIT (EC 2.7.7.6) (RPC155) - Homo sapiens (Human)%3B SWISSPROT:RPC1_HUMAN gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0215 Ta0215 217150 218247 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE0249 - Aeropyrum pernix (strain K1)%3B PIR:H72782 gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1228 Ta1228 1294165 1295742 - cytochrome b related protein similarity to known protein: cytochrome b6 homolog soxC [similarity] - Sulfolobus acidocaldarius%3B PIR:S21043 gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1435 Ta1435 1484150 1485460 - probable dihydrolipoamide dehydrogenase similarity to known protein: dihydrolipoamide dehydrogenase (EC 1.8.1.4) - Bacillus subtilis%3B PIR:E36718 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0692 Ta0692 731381 732622 - transport protein related protein similarity to known protein: Erwinia chrysanthemi exuT (exuT) and exuR (exuR) genes%2C complete cds%3B TREMBL:U86689_1 gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0974 Ta0974 1039815 1040969 - probable acyl-CoA dehydrogenase strong similarity to known protein: T.thermosaccharolyticum BCS operon DNA%3B TREMBL:TTBCSOPRN_2. Relation: similar as well to butyryl-CoA dehydrogenase - Thermoanaerobacterium thermosaccharolyticum%2C TREMBL:TTBCSOPRN_2. gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1333 Ta1333 1382323 1383399 - hypothetical membrane protein similarity to unknown protein: hypothetical protein APE0671 - Aeropyrum pernix (strain K1)%3B PIR:D72655 gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0833 Ta0833 894626 895072 + NADPH-dependent butanol dehydrogenase related protein similarity to known protein: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) - Clostridium acetobutylicum%3B PIR:JU0053 gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1173 Ta1173 1245425 1245796 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein MTH1438 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:D69058. Relation: similarity to transcription regulator proteins. gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0556 Ta0556 585335 585760 + hypothetical protein weak similarity to unknown protein gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0936 Ta0936 1004542 1005180 - conserved hypothetical protein weak similarity to known protein. Relation: similar to phosphoserine phosphatase PIR:S53931. gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0596 Ta0596 627612 628151 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1580 - Archaeoglobus fulgidus%3B PIR:C69447 gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0205 Ta0205 205766 206614 - 2%2C 4-dienoyl-CoA reductase (NADPH) precursor related protein strong similarity to known protein: 2%2C 4-dienoyl-CoA reductase (NADPH) (EC 1.3.1.34) precursor%2C mitochondrial - human%3B PIR:S53352 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1296 Ta1296 1345922 1347091 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0962 - Pyrococcus horikoshii%3B PIR:E71087 gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0666 Ta0666 699697 700101 - conserved hypothetical protein similarity to unknown protein: hypothetical protein Rv3073c - Mycobacterium tuberculosis (strain H37RV)%3B PIR:B70651 gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0970 Ta0970 1035312 1035746 - NADH dehydrogenase%2C chain A related protein similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 3 - wheat chloroplast%3B PIR:S27251 gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1243 Ta1243 1307206 1307988 - nucleolar protein Nop56 related protein similarity to known protein: NUCLEOLAR PROTEIN NOP56 - Homo sapiens (Human)%3B SWISSPROT:NO56_HUMANFunction: probably involved in RNA splicing. gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1482 Ta1482 1533797 1534237 + hypothetical protein no similarity gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0173 Ta0173 178050 178856 - hypothetical membrane protein no similarity gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1375 Ta1375 1420533 1421009 + conserved hypothetical protein similarity to unknown protein: hypothetical protein - Deinococcus radiodurans (strain R1)%3B PIR:F75455 gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0171 Ta0171 175914 176882 - conserved hypothetical protein similarity to unknown protein: probable iron (III) ABC transporter%2C periplasmic-binding protein PAB0349 - Pyrococcus abyssi (strain Orsay)%3B PIR:A75169. Relation: weak similarity to HEMIN-BINDING PERIPLASMIC PROTEIN HMUT PRECURSOR%2C Yersinia pestis%2C SWISSPROT:HMUT_YERPE. gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1439 Ta1439 1488873 1489754 - methionyl aminopeptidase related protein similarity to known protein: methionyl aminopeptidase (EC 3.4.11.18) 2 - human%3B PIR:DPHUM2 gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0771 Ta0771 811695 812225 + hypothetical protein no similarity gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0723 Ta0723 767538 768200 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB0997 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75064 gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1377 Ta1377 1421593 1422738 - sugar transporter related protein similarity to known protein: Arthrobacter sp. gene for negative regulator%2C sarcosine oxidase%2C transporter%2C creatinase%2C creatininase and transporter%2C complete cds%3B TREMBL:AB007122_3 gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0099 Ta0099 95054 96334 + probable histidyl-tRNA synthetase strong similarity to known protein: Arabidopsis thaliana histidyl-tRNA synthetase mRNA%2C complete cds%3B TREMBL:AF020715_1 gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0625 Ta0625 657177 657731 + hypothetical protein weak similarity to known protein gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0905 Ta0905 974362 975510 - GTP-binding protein Obg related protein similarity to known protein: GTP-binding protein obg - Bacillus subtilis%3B PIR:B32804 gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0779 Ta0779 822436 823365 + 2-hydroxyacid dehydrogenase related protein similarity to unknown protein: 2-hydroxyacid dehydrogenase homolog - Archaeoglobus fulgidus%3B PIR:B69472. Relation: SIM. to PIR:A47117 formate dehydrogenase (EC 1.2.1.2) - Neurospora crassa and to SERA_ARATH phosphoglycerate dehydrogenase (EC 1.1.1.95) - A.taliana%2C the function is not clear.. gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0641 Ta0641 674191 675174 + daunorubicin resistance protein related protein similarity to known protein: daunorubicin resistance protein - Streptomyces peucetius%3B PIR:S27707 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term= 352853 352925 + tRNA-Gly Predicted Gly tRNA (Anticodon TCC) tRNA rna7 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1227 Ta1227 1293275 1294159 + probable carboxyphosphonoenolpyruvate phosphonomutase strong similarity to known protein: S.hygroscopicus DNA for carboxyphosphonoenolpyruvate mutase%3B TREMBL:SJCPNEPM_1Function: The enzyme carboxyphosphonoenolpyruvate mutase catalyses the formation of one of the two C-P bonds in bialaphos%2C a potent herbicide isolated from Streptomyces hygroscopicus. gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0857 Ta0857 922256 923149 + ABC transporter cdd4-like protein ScnF related protein similarity to known protein: cdd4-like protein ScnF - Streptococcus pyogenes%3B PIR:T09008 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1306 Ta1306 1353038 1353523 - hypothetical protein weak similarity to unknown protein. Relation: weak similarity to conserved hypothetical protein MTH1600 - Methanobacterium thermoautotrophicum%2C PIR2:G69080. gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0451 Ta0451 478750 479793 - cell division control protein 6 related protein similarity to known protein: Xenopus laevis cell division control protein 6 (cdc6) mRNA%2C complete cds%3B TREMBL:XLU66558_1 gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0785 Ta0785 830903 831493 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PH1610 - Pyrococcus horikoshii%3B PIR:B71040 gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0071 Ta0071 69024 69230 + hypothetical protein no similarity gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1463 Ta1463 1509939 1510667 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB2280 - Pyrococcus abyssi (strain Orsay)%3B PIR:E75197 gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0747 Ta0747 791014 791751 + glucose 1-dehydrogenase related protein similarity to known protein: glucose 1-dehydrogenase (EC 1.1.1.47) - Bacillus megaterium%3B PIR:A33528 gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1277 Ta1277 1330418 1331059 - thiamine phosphate pyrophosphorylase (yeast THI6) related protein similarity to known protein: thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) / hydroxyethylthiazole kinase (EC 2.7.1.50) THI6 - yeast (Saccharomyces cerevisiae)%3B PIR1:A55145 gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0339 Ta0339 359361 360434 - alpha-amylase related protein similarity to unknown protein: alpha-amylase (EC 3.2.1.1) - Methanococcus jannaschii%3B PIR:B64501 gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1181 Ta1181 1252175 1252813 - hypothetical protein weak similarity to unknown protein gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1220 Ta1220 1287765 1288088 - hypothetical membrane protein no similarity gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1236 Ta1236 1302033 1302743 - hypothetical protein no similarity gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0938 Ta0938 1006858 1007190 - hypothetical protein no similarity gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0288 Ta0288 306916 308580 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1949 - Pyrococcus horikoshii%3B PIR:E71210 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0126 Ta0126 119235 120710 + trehalose/maltose binding protein (malE) related protein similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes%2C complete cds%3B TREMBL:AF012836_1 gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0083 Ta0083 82159 82368 - conserved hypothetical protein similarity to unknown protein: hypothetical protein APES056 - Aeropyrum pernix (strain K1)%3B PIR:C72534 gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0212 Ta0212 213469 214350 + electron transfer flavoprotein subunit alpha related protein similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum%3B SWISSPROT:ETFA_CLOAB gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0683 Ta0683 719652 721064 + hypothetical protein weak similarity to known protein. Relation: weak similarity to putative transporter protein%2C Mycobacterium smegmatis%3B AF157643_4. gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1127 Ta1127 1194831 1196420 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein aq_1896 - Aquifex aeolicus%3B PIR:E70463 gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0520 Ta0520 549820 550530 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0706 - Archaeoglobus fulgidus%3B PIR:B69338 gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0690 Ta0690 728691 729626 - probable sugar ABC transporter%2C permease protein similarity to known protein: membrane protein lacF - Agrobacterium radiobacter%3B PIR1:MMAGCF. Relation: similarity to membrane protein lacG - Agrobacterium radiobacter%3BPIR1:MMAGCF. gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1291 Ta1291 1342590 1343153 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MTH685 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:C69191 gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1011 Ta1011 1080498 1081283 - peptidyl-prolyl cis-trans isomerase related protein similarity to known protein: fkbp-type peptidyl-prolyl cis-trans isomerase (slyd) PAB1864 - Pyrococcus abyssi (strain Orsay)%3B PIR:B75119 gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0609 Ta0609 640473 641462 + asparagine--tRNA ligase related protein similarity to known protein: asparagine--tRNA ligase (EC 6.1.1.22) asnS2 - Lactobacillus delbrueckii subsp. bulgaricus%3B PIR:S71074 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0386 Ta0386 410721 411410 - hypothetical protein weak similarity to unknown protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0297 Ta0297 317774 318940 + probable DEAD box protein strong similarity to known protein: DEAD box protein - Klebsiella pneumoniae%3B PIR2:JX0314 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0644 Ta0644 676875 677681 - probable site-specific DNA-methyltransferase (adenine-specific) strong similarity to known protein: site-specific DNA-methyltransferase (adenine-specific) (EC 2.1.1.72) DnpII - Streptococcus pneumoniae%3B PIR:XYSONA gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0963 Ta0963 1031372 1031590 - hypothetical protein weak similarity to known protein. Relation: similarity to NADH dehydrogenase%2C chain J. gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0719 Ta0719 762470 763192 + hypothetical protein weak similarity to known protein gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0578 Ta0578 608507 609226 + hypothetical protein similarity to unknown protein: probable integral membrane protein (dedA homolog) Cj1168c [imported] - Campylobacter jejuni (strain NCTC 11168)%3B PIR:B81322 gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1344 Ta1344 1393192 1394184 - conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein AF0053 - Archaeoglobus fulgidus%3B PIR:E69256 gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1108 Ta1108 1179284 1180057 - conserved hypothetical membrane protein strong similarity to unknown protein: hypothetical protein PH1345 - Pyrococcus horikoshii%3B PIR:C71006 gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0385 Ta0385 410421 410720 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1663 - Archaeoglobus fulgidus%3B PIR:F69457 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0997 Ta0997 1067819 1068853 - N2%2C N2-dimethylguanosine tRNA methyltransferase related protein similarity to known protein: N2%2C N2-dimethylguanosine tRNA methyltransferase - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:G69025 gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0065 Ta0065 62457 64004 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PAB1697 - Pyrococcus abyssi (strain Orsay)%3B PIR:G75077 gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1280 Ta1280 1333827 1335410 + oligopeptide ABC transporter%2C ABC-binding protein related protein similarity to known protein: oligopeptide transport protein oppF - Lactococcus lactis subsp. lactis%3B PIR2:B53290 gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0114 Ta0114 108583 109131 + N-methyl-transferase related protein similarity to known protein: S.alboniger napH%2C pur7%2C pur10%2C pur6%2C pur4%2C pur5 and pur3 genes%3B TREMBL:SAPURCLUS_7 gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1358 Ta1358 1407203 1408504 - glycine dehydrogenase (decarboxylating) related protein%2C subunit 1 similarity to known protein: glycine dehydrogenase (decarboxylating) (EC 1.4.4.2) component P precursor - garden pea%3B PIR:A42109 gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1142 Ta1142 1212343 1214214 + tungstealdehyde ferredoxaldehyde ferredoxin oxidoreductase related protein similarity to known protein: TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE (EC 1.2.7.-) - Pyrococcus furiosus%3B SWISSPROT:AOR_PYRFU gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0372 Ta0372 393792 394751 + conserved hypothetical protein similarity to unknown protein: trifolitoxin synthesis protein TfxC - Rhizobium leguminosarum%3B PIR:C47116 gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1018 Ta1018 1088696 1089844 + serine-glyoxylate aminotransferase related protein similarity to known protein: SERINE--GLYOXYLATE AMINOTRANSFERASE (EC 2.6.1.45) (SGAT) - Hyphomicrobium methylovorum%3B SWISSPROT:SGAA_HYPMEFunction: L-Serine + Glyoxylate %3D 3-Hydroxypyruvate + Glycine Involved in glycine%2C serine and threonine metabolism. gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0694 Ta0694 735061 735819 + hypothetical protein no similarity gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0821 Ta0821 879440 880237 + conserved hypothetical protein weak similarity to unknown protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0820 Ta0820 877609 879405 - conserved hypothetical protein weak similarity to known protein gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1191 Ta1191 1261851 1262720 - tRNA intron endonuclease related protein similarity to known protein: TRNA-INTRON ENDONUCLEASE (EC 3.1.27.9) - Halobacterium volcanii (Haloferax volcanii)%3B SWISSPROT:ENDA_HALVO gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term= 182802 182875 + tRNA-Lys Predicted Lys tRNA (Anticodon CTT) tRNA rna2 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0304 Ta0304 327236 327529 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein MJ0273 - Methanococcus jannaschii%3B PIR:B64334 gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1252 Ta1252 1313990 1314481 - probable 50S ribosomal protein L18 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L18P (HMAL18) (HL12) - Haloarcula marismortui (Halobacterium marismortui)%3B SWISSPROT:RL18_HALMA gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term= 845602 845674 + tRNA-Asp Predicted Asp tRNA (Anticodon GTC) tRNA rna18 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0515 Ta0515 544413 545783 + probable signal recognition particle protein strong similarity to known protein: SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN 2 (SRP54) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:SR52_ARATH gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0667 Ta0667 700129 701676 - acyl-CoA synthetase related protein similarity to known protein: probable acid--CoA ligase (EC 6.2.1.-) - Pseudomonas oleovorans plasmid OCT%3B PIR2:S27995 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0541 Ta0541 570002 571147 - heterodisulfide reductase related protein similarity to known protein: heterodisulfide reductase (EC 1.-.-.-) chain D - Archaeoglobus fulgidus%3B PIR:A69351ORF_prediction: This protein reveals a longer N-teminus as its related species%2C codon usage is acceptable and frequency of rare codons very low%2C so we have not truncated the N-terminus.. gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0885 Ta0885 951865 952269 + conserved hypothetical protein similarity to unknown protein: hypothetical protein AF0104 - Archaeoglobus fulgidus%3B PIR:H69262 gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1187 Ta1187 1257209 1258381 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein TM1336 - Thermotoga maritima (strain MSB8)%3B PIR:H72265 gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0890 Ta0890 957931 958647 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1232 - Archaeoglobus fulgidus%3B PIR:G69403 gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0014 Ta0014 12660 13337 + hypothetical protein no similarity gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0432 Ta0432 459390 459779 - probable 30S ribosomal protein S9 strong similarity to known protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1430 Ta1430 1479706 1480827 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF2058 - Archaeoglobus fulgidus%3B PIR:A69507 gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1083 Ta1083 1155519 1156823 - nodulation protein NfeD related protein similarity to known protein: Rhizobium etli plasmid pTAL182c NfeD (nfeD) gene%2C complete cds%3B TREMBLNEW:RE41754_1 gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1369 Ta1369 1415933 1416262 + conserved hypothetical protein strong similarity to unknown protein: thioredoxin peroxidase (EC 1.11.1.-) TM0780 [similarity] - Thermotoga maritima (strain MSB8)%3B PIR:E72332. Relation: weak similarity to MITOCHONDRIAL THIOREDOXIN-DEPENDENT PEROXIDE REDUCTASE PRECURSOR (ANTIOXIDANT PROTEIN 1) (AOP-1) (SP-22 PROTEIN)%2C Bos taurus%2C SWISSPROT:TDXM_BOVIN. gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0758 Ta0758 800561 802159 + DNA-dependent DNA polymerase X related protein similarity to known protein: Thermus aquaticus DNA for DNA polymerase family X%2C aminopeptidase T%2C QAH/OAS sulfhydrylase%2C complete cds%3B TREMBL:TAD6641_1 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0487 Ta0487 518440 519210 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein c04019 - Sulfolobus solfataricus%3B PIR:S75386 gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0472 Ta0472 502734 503333 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB0208 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75143 gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0467 Ta0467 495101 496369 + conserved hypothetical membrane protein similarity to unknown protein: probable integral membrane protein Cj1500 [imported] - Campylobacter jejuni (strain NCTC 11168)%3B PIR:H81296 gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0537 Ta0537 566813 567505 - phosphoesterase related protein similarity to unknown protein: probable phosphoesterase (EC 3.1.-.-) AF1155 - Archaeoglobus fulgidus%3B PIR:B69394 gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0579 Ta0579 609218 609514 - conserved hypothetical protein similarity to unknown protein gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0053 Ta0053 50600 50755 + probable 50S ribosomal protein L39 strong similarity to known protein: ribosomal protein L39%2C cytosolic [validated] - rat%3B PIR1:R6RT39 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0408 Ta0408 435216 435614 - hypothetical protein no similarity gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0344 Ta0344 366816 367802 - conserved hypothetical protein strong similarity to unknown protein: lmbP protein - Synechocystis sp. (strain PCC 6803)%3B PIR:S74844 gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0193 Ta0193 194245 195525 + IFN-gamma-induced (putative GTP-binding protein) protein Mg11 related protein similarity to known protein: intracellular protein Mg11 - mouse%3B PIR2:I49127 gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term= 1477253 1477335 + tRNA-Ser Predicted Ser tRNA (Anticodon CGA) tRNA rna42 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0036 Ta0036 30996 34259 + DNA polymerase II (DP1)%2C subunit 2 related protein similarity to known protein: Pyrococcus furiosus gene for DNA polymerase II subunit 1%2C DNA polymerase IIsubunit 2%2C complete cds%3B TREMBL:D84670_3 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0009 Ta0009 8957 9568 + hypothetical protein no similarity gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0954 Ta0954 1023556 1024155 - peroxiredoxin related protein similarity to known protein: PROBABLE PEROXIREDOXIN 1 - Sulfolobus metallicus%3B SWISSPROT:TDX1_SULME gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1158 Ta1158 1229922 1230980 + glycerol 1-phosphate dehydrogenase related protein similarity to known protein: glycerol dehydrogenase (EC 1.1.1.6) [validated] - Bacillus stearothermophilus%3B PIR:JQ1474Function: probably involved in the utilazation of glycerol. gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1389 Ta1389 1435478 1436209 + hypothetical protein no similarity gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1009 Ta1009 1079458 1079775 - conserved hypothetical protein similarity to unknown protein: hypothetical protein MTH1491 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:G69065 gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0120 Ta0120 113460 113822 - hypothetical protein no similarity gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1103 Ta1103 1174864 1175880 + probable glyceraldehyde-3-phosphate dehydrogenase strong similarity to known protein: glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) - Methanothermus fervidus%3B PIR:JT0286 gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1200 Ta1200 1270438 1271769 - probable cobyrinic acid a%2C c-diamide synthase (cbiA) strong similarity to known protein: COBYRINIC ACID A%2C C-DIAMIDE SYNTHASE - Bacillus megaterium%3B SWISSNEW:COBB_BACME gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0477 Ta0477 506915 507604 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein SC7H2.04c - Streptomyces coelicolor%3B PIR:T35735 gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0765 Ta0765 806280 807437 + aspartate transaminase related protein similarity to known protein: aspartate transaminase (EC 2.6.1.1) - Bacillus sp. (strain YM-2)%3B PIR:A38621 gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0084 Ta0084 82426 83142 - hypothetical protein no similarity gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1468 Ta1468 1516138 1516560 + hypothetical protein no similarity gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0961 Ta0961 1029157 1031064 - NADH dehydrogenase%2C chain L related protein similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5 NQO12 [similarity] - Thermus aquaticus thermophilus%3B PIR:T11909 gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1364 Ta1364 1412578 1413213 + hypothetical protein no similarity gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0249 Ta0249 255896 256981 + probable N-acylamino acid racemase strong similarity to known protein: N-Acylamino acid racemase - Amycolatopsis sp.%3B PIR:I39598 gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0721 Ta0721 765736 766488 + hypothetical protein no similarity gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0330 Ta0330 349810 351792 - threonine--tRNA ligase related protein similarity to known protein: threonine--tRNA ligase (EC 6.1.1.3) - human%3B PIR1:YSHUT gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0612 Ta0612 643755 644390 + proteasome%2C beta chain known protein: proteasome beta chain - Thermoplasma acidophilum%3B PIR:A42068 gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1265 Ta1265 1319503 1320180 - probable 30S ribosomal protein S3 strong similarity to known protein: ribosomal protein S3 [validated] - Haloarcula marismortui%3B PIR:R3HS3S gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0843 Ta0843 910405 910575 + hypothetical protein no similarity gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0479 Ta0479 509248 510288 - glucosamine-fructose-6-phosphate aminotransferase related protein similarity to known protein: GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING](EC 2.6.1.16) (GFAT) (NODULATION PROTEIN M) - Rhizobium leguminosarum (biovar viciae)%3B SWISSPROT:NODM_RHILVFunction: glutamate metabolism. gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0634 Ta0634 664475 665173 - hypothetical protein weak similarity to known protein. Relation: weak similarity to probable glycerophosphodiester phosphodiesterase (EC 3.1.4.46) - Staphylococcus aureus%2C PIR:A41652. gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0252 Ta0252 259130 260587 + D-XYLOSE-PROTON SYMPORTER (D-XYLOSE TRANSPORTER) related protein similarity to known protein: sugar transporter homolog ydjK - Bacillus subtilis%3B PIR:G69789 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0982 Ta0982 1050806 1051186 - hypothetical protein no similarity gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0197 Ta0197 197428 198543 + conserved hypothetical membrane protein strong similarity to unknown protein: hypothetical protein - Thermoproteus tenax%3B PIR:S00656. Relation: weak similarity to facilitative glucose transporter GLUT2 - chicken%2C PIR2:S43230. gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1122 Ta1122 1190452 1191297 - spherulin 4 precursor related protein similarity to unknown protein: spherulin 4 precursor - slime mold (Physarum polycephalum)%3B PIR:S03871 gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0945 Ta0945 1013678 1014601 - transcription initiation factor IIB related protein similarity to known protein: transcription initiation factor IIB [validated] - human%3B PIR:TWHU2B gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0590 Ta0590 622207 622614 + hypothetical protein weak similarity to known protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1149 Ta1149 1221818 1222261 - conserved hypothetical protein similarity to unknown protein: hypothetical protein APE1323 - Aeropyrum pernix (strain K1)%3B PIR:E72607 gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1492 Ta1492 1545300 1547069 + probable RNase L inhibitor strong similarity to known protein: RNase L inhibitor (clone 8) - human%3B PIR:S63672 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0097 Ta0097 92151 93497 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF1899 - Archaeoglobus fulgidus%3B PIR:B69487 gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0290 Ta0290 309413 309763 + hypothetical protein weak similarity to known protein. Relation: weak similarity to sterol carrier protein - chicken%2C PIR:S34744. gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0462 Ta0462 490070 491776 + probable methylmalonyl-CoA mutase%2C alpha subunit%2C N-terminus strong similarity to known protein: METHYLMALONYL-COA MUTASE%2C MITOCHONDRIAL PRECURSOR (EC 5.4.99.2) (MCM) - Homo sapiens (Human)%3B SWISSPROT:MUTA_HUMANFunction: involved in valine%2C leucine and isoleucine degradation and propanoate metabolism. gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term= 656334 656418 + tRNA-Leu Predicted Leu tRNA (Anticodon TAG) tRNA rna14 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1238 Ta1238 1303857 1304315 + hypothetical protein no similarity gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0555 Ta0555 584710 585357 + hypothetical protein similarity to unknown protein: hypothetical protein PH0553 - Pyrococcus horikoshii%3B PIR:E71169 gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term= 1054826 1054897 + tRNA-His Predicted His tRNA (Anticodon GTG) tRNA rna23 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0195 Ta0195 196254 196673 - conserved hypothetical protein similarity to unknown protein: HYPOTHETICAL 15.2 KDA PROTEIN IN XCPR 3'REGION (ORF2) - Acinetobacter calcoaceticus%3B SWISSPROT:YXC2_ACICA gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0150 Ta0150 151363 151869 - hypothetical protein no similarity gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0045 Ta0045 42742 44850 + probable formate dehydrogenase%2C alpha subunit strong similarity to known protein: Methanobacterium thermoformicicum formate dehydrogenase operon and flankingregions%2C formate transporter (fdhC)%2C formate dehydrogenase alpha subunit(fdhA) and formate dehydrogenase beta subunit (fdhB) genes%2C complete cds%3B TREMBL:MT52681_3Function: Glyoxylate and dicarboxylate metabolism%2C Methane metabolism. gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0352 Ta0352 374468 374962 + conserved hypothetical protein similarity to unknown protein: hypothetical protein homolog MJ1552 - Methanococcus jannaschii%3B PIR:G64493 gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0854 Ta0854 919988 920536 - probable phosphoheptose isomerase strong similarity to known protein: Haemophilus ducreyi phosphoheptose isomerase (gmhA) gene%2C complete cds%3B TREMBL:AF045156_1 gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1182 Ta1182 1252957 1253922 - glucose-fructose oxidoreductase related protein similarity to known protein: Z.mobilis gfo gene%3B TREMBL:ZMGFO_1 gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0739 Ta0739 780815 781468 - hypothetical protein weak similarity to unknown protein gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0639 Ta0639 670988 672487 - phenylalanine--tRNA ligase beta chain related protein similarity to known protein: phenylalanine--tRNA ligase (EC 6.1.1.20) beta chain%2C cytosolic [validated] - yeast (Saccharomyces cerevisiae)%3B PIR:YFBYAC gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0380 Ta0380 406072 406674 + hypothetical protein weak similarity to known protein gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0682 Ta0682 718848 719507 - hypothetical membrane protein no similarity gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1467 Ta1467 1514957 1516138 + conserved hypothetical protein similarity to unknown protein: hypothetical protein APE1043 - Aeropyrum pernix (strain K1)%3B PIR:D72703 gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1486 Ta1486 1537903 1538982 + mannose-1-phosphate guanyltransferase related protein similarity to known protein: mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) - yeast (Saccharomyces cerevisiae)%3B PIR:S67590Function: Fructose and mannose metabolism. gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0849 Ta0849 913888 916503 + alanyl-tRNA synthetase related protein similarity to known protein: Aquifex pyrophilus alanyl-tRNA synthetase (alaS) gene%2C complete cds%3B andATP-dependent Clp protease regulatory subunit (clpA) gene%2C partial cds%3B TREMBLNEW:AF027500_1 gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0902 Ta0902 971511 972365 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein AF0995 - Archaeoglobus fulgidus%3B PIR:C69374 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0123 Ta0123 115599 117443 - probable phosphoenolpyruvate carboxykinase strong similarity to known protein: PHOSPHOENOLPYRUVATE CARBOXYKINASE [GTP] (EC 4.1.1.32)(PHOSPHOENOLPYRUVATE CARBOXYLASE) (PEPCK) - Chlorobium limicola%3B SWISSPROT:PPCK_CHLLIFunction: Citrate cycle (TCA cycle)%2C Pyruvate metabolism. gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0925 Ta0925 996379 996549 - hypothetical protein no similarity gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1309 Ta1309 1355156 1357153 - probable H+/K+-exchanging ATPase chain B strong similarity to known protein: H+/K+-exchanging ATPase (EC 3.6.1.36) chain B [validated] - Escherichia coli%3B PIR:PWECBK gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0580 Ta0580 609659 610342 + hypothetical protein weak similarity to unknown protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0424 Ta0424 450251 450700 - hypothetical protein no similarity gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0630 Ta0630 660952 661470 - conserved hypothetical protein similarity to unknown protein: hypothetical protein aq_262 - Aquifex aeolicus%3B PIR:H70323 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0784 Ta0784 829848 830789 + hypothetical protein no similarity gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0294 Ta0294 314192 315172 - acyl-CoA dehydrogenase (SHORT-CHAIN SPECIFIC) related protein similarity to known protein: ACYL-COA DEHYDROGENASE%2C SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum%3B SWISSPROT:ACDS_CLOAB gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1287 Ta1287 1340336 1341715 - probable inorganic phosphate transport protein related protein similarity to known protein: probable sugar transport protein c0110 - Sulfolobus solfataricus%3B PIR:S74046 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1211 Ta1211 1279306 1280586 + tryptophanyl-tRNA synthetase related protein similarity to known protein: H.sapiens mRNA for IFP53%3B TREMBL:HSIFP53_1 gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0689 Ta0689 727814 728689 - probable sugar ABC transporter%2C permease protein similarity to known protein: membrane protein lacG - Agrobacterium radiobacter%3B PIR:MMAGCG. Relation: similarity to membrane protein lacG - Agrobacterium radiobacter%3B PIR:MMAGCG. gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1175 Ta1175 1246336 1247463 + VAT-2 protein known protein: cell division control protein 48%2C AAA family (cdc48-2) homolog - Archaeoglobus fulgidus%3B PIR:B69512 gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0007 Ta0007 6173 6868 - hypothetical membrane protein no similarity gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0879 Ta0879 944668 947712 - isoleucyl-tRNA synthetase related protein similarity to known protein: isoleucine--tRNA ligase (EC 6.1.1.5) - human%3B PIR:I59314 gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0813 Ta0813 867053 868420 + conserved hypothetical protein strong similarity to unknown protein: tldD-related protein PH0848 - Pyrococcus horikoshii%3B PIR:D71135 gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1507 Ta1507 1561275 1561580 + hypothetical protein weak similarity to known protein. Relation: similarity to small region of SWISSPROT:NCAP_SV5 (509 aa). gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0438 Ta0438 464132 464320 + hypothetical protein no similarity gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0892 Ta0892 959496 960653 + conserved hypothetical protein similarity to unknown protein: hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:G72244 gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0816 Ta0816 872132 873778 - pyruvate dehydrogenase (cytochrome) related protein similarity to known protein: pyruvate dehydrogenase (cytochrome) (EC 1.2.2.2) - Escherichia coli%3B PIR:DEECPCFunction: involved in pyruvate metabolism. gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1045 Ta1045 1115769 1118111 + H+-transporting ATPase related protein similarity to known protein: PLASMA MEMBRANE ATPASE 3 (EC 3.6.1.35) (PROTON PUMP).PLASMA MEMBRANE ATPASE 3 (EC 3.6.1.35) (PROTON PUMP 3) - Arabidopsis thaliana (Mouse-ear cress).Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:PMA3_ARATH gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0189 Ta0189 190929 191147 + hypothetical protein weak similarity to known protein. Relation: weak similarity to transposase for insertion sequence element is905%2C lactococcus lactis%2C SWISSPROT:TRA5_LACLA. gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0922 Ta0922 991267 991749 - hypothetical protein weak similarity to unknown protein gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term= 1349852 1349924 + tRNA-Pro Predicted Pro tRNA (Anticodon TGG) tRNA rna35 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1070 Ta1070 1143746 1144354 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein homolog MJ1677 - Methanococcus jannaschii%3B PIR:C64509 gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0447 Ta0447 475382 476173 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE1688 - Aeropyrum pernix (strain K1)%3B PIR:D72550 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0167 Ta0167 169581 172577 + thermopsin precursor related protein similarity to known protein: thermopsin (EC 3.4.99.43) precursor - Sulfolobus acidocaldarius%3B PIR:A35009Function: (probable extracellular membrane metalloprotease). gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1025 Ta1025 1097508 1098068 - hypothetical membrane protein no similarity gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0632 Ta0632 662776 663213 - hypothetical protein no similarity gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0512 Ta0512 542058 543056 - probable tyrosyl-tRNA synthetase strong similarity to known protein: tyrosine--tRNA ligase (EC 6.1.1.1) [validated] - yeast (Saccharomyces cerevisiae)%3B PIR:A45999 gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0122 Ta0122 114592 115602 + xylulose kinase related protein similarity to known protein: Homo sapiens mRNA for N-Acetylglucosamine kinasegene: N-Acetylglucosamine kinase%3B Homo sapiens mRNA for N-Acetylglucosamine kinase%3B TREMBL:HSA242910_1 gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0403 Ta0403 429821 430573 - nife hydrogenase gamma subunit related protein similarity to known protein: Thermococcus litoralis putative formate dehydrogenase beta subunit gene%2C partial cds%3B and putative formate dehydrogenase alpha subunit%2C NiFehydrogenase beta subunit (hydB)%2C NiFe hydrogenase gamma subunit (hydG)%2C NiFe hydrogenase delta subunit (hydD)%2C and NiFe hydrogenase alpha subunit(hydA) genes%2C complete cds%3B TREMBLNEW:AF039208_4 gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1023 Ta1023 1093833 1095032 - molybdopterin biosynthesis protein (moeA-2) related protein similarity to known protein: molybdopterin biosynthesis protein moeA - Escherichia coli%3B PIR:A32352 gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0581 Ta0581 610379 611602 - sugar transport protein related protein similarity to known protein: carboxylic acid transport protein JEN1 - yeast (Saccharomyces cerevisiae)%3B PIR:S38060 gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1354 Ta1354 1402957 1403787 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1234 - Pyrococcus horikoshii%3B PIR:D71067 gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1171 Ta1171 1244181 1244603 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein AF0555 - Archaeoglobus fulgidus%3B PIR:C69319 gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1088 Ta1088 1161177 1162274 + heat shock protein DnaJ related protein similarity to known protein: heat shock protein dnaJ - Clostridium acetobutylicum%3B PIR:S41758 gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1346 Ta1346 1395759 1396970 + multidrug-efflux transporter related protein similarity to known protein: multidrug-efflux transporter bmr - Bacillus subtilis%3B PIR:A39705 gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0246 Ta0246 253307 253768 + hypothetical protein weak similarity to unknown protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0688 Ta0688 726691 727809 - probable sugar ABC transporter%2C ATP-binding protein strong similarity to known protein: protein1%3B Rhodobacter sphaeroides operon regulator (smoC)%2C periplasmicsorbitol-binding protein (smoE)%2C sorbitol/mannitol transport inner membraneprotein (smoF)%2C sorbitol/mannitol transport inner membrane protein (smoG)%2C sorbitol/mannitol transport ATP-binding transport protein (smoK)%2C sorbitoldehydrogenase (smoS)%2C mannitol dehydrogenase (mtlK)%2C and periplasmicmannitol-binding protein (smoM) genes%2C complete cds%3B TREMBL:AF018073_5. Relation: stron similarity to sorbitol/mannitol transport atp-binding transport protein Rhodobacter sphaeroides TREMBL:AF018073_5. gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0038 Ta0038 35175 35780 - 72K mitochondrial outer membrane protein related protein similarity to known protein: 72K mitochondrial outer membrane protein - Neurospora crassa%3B PIR:A36682 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1006 Ta1006 1077276 1077578 + probable transcription-associated protein TFIIS strong similarity to known protein: DNA-DIRECTED RNA POLYMERASE SUBUNIT M (EC 2.7.7.6) - Thermococcus celer%3B SWISSPROT:RPOM_THECE gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0355 Ta0355 375837 376658 - spermidine synthase 2 related protein similarity to known protein: SPERMIDINE SYNTHASE 2 (EC 2.5.1.16) (PUTRESCINE AMINOPROPYLTRANSFERASE2) (SPDSY 2) - Hyoscyamus niger (Henbane)%3B SWISSPROT:SPE2_HYONI gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0696 Ta0696 737320 738444 + conserved hypothetical protein weak similarity to known protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1509 Ta1509 1563370 1564680 - probable glycine hydroxymethyltransferase strong similarity to known protein: glycine hydroxymethyltransferase (EC 2.1.2.1) - Methanobacterium thermoautotrophicum (strain Marburg)%3B PIR2:S62190 gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0551 Ta0551 581213 582844 + phenylalanyl-tRNA synthetase beta chain related protein similarity to known protein: PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN CYTOPLASMIC (EC 6.1.1.20)(PHENYLALANINE--TRNA LIGASE ALPHA CHAIN) (PHERS) - Candida albicans (Yeast)%3B SWISSPROT:SYFA_CANAL gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1235 Ta1235 1300566 1301771 - hypothetical membrane protein no similarity gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1334 Ta1334 1383549 1384175 - hypothetical protein weak similarity to unknown protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1111 Ta1111 1181140 1182093 + UDP-glucose 4-epimerase related protein similarity to known protein: UDPglucose 4-epimerase (EC 5.1.3.2) - yeast (Saccharomyces cerevisiae)%3B PIR:XEBYUG gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1087 Ta1087 1159319 1161160 + probable DnaK-type molecular chaperone strong similarity to known protein: DNAK PROTEIN (HEAT SHOCK PROTEIN 70) (HSP70) - Escherichia coli%3B SWISSPROT:DNAK_ECOLI gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1054 Ta1054 1124792 1127182 - DNA gyrase%2C subunit A (gyrA) related protein similarity to known protein: DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) chain A - Haloferax sp.%3B PIR:S30571 gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0012 Ta0012 11812 12021 + hypothetical protein no similarity gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0055 Ta0055 51163 51732 + translation initiation factor eIF-6 related protein similarity to known protein: Mus musculus translation initiation factor eIF6 mRNA%2C complete cds%3B TREMBL:AF047046_1 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0741 Ta0741 782317 786351 - acid protease related protein similarity to known protein: thermopsin (EC 3.4.99.43) precursor - Sulfolobus acidocaldarius%3B PIR:A35009 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0168 Ta0168 172585 173058 - hypothetical protein weak similarity to unknown protein. Relation: weak similarity to shikimate 5-dehydrogenase %2C Methanococcus jannaschii%2C PIR2:C64435. gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1196 Ta1196 1266603 1266998 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein aq_254 - Aquifex aeolicus%3B PIR:C70323 gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0136 Ta0136 132413 133036 + nitrate reductase related protein similarity to known protein: nitrate reductase (NADPH) (EC 1.6.6.3) - Aspergillus niger%3B PIR:JQ1525 gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1506 Ta1506 1560379 1561104 - probable apurinic/apyrimidinic endonuclease strong similarity to known protein: Cricetulus griseus apurinic/apyrimidinic endonuclease (APE) gene%2C completecds%3B TREMBL:AF056934_1 gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1408 Ta1408 1460105 1460620 + hypothetical protein weak similarity to unknown protein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0281 Ta0281 298108 299748 - arginine--tRNA ligase related protein similarity to known protein: arginine--tRNA ligase (EC 6.1.1.19) - Corynebacterium glutamicum%3B PIR1:A49936 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1113 Ta1113 1183850 1184296 - probable nucleoside diphosphate kinase strong similarity to known protein: NUCLEOSIDE DIPHOSPHATE KINASE (EC 2.7.4.6) (NDK) (NDP KINASE) - Staphylococcus aureus%3B SWISSPROT:NDK_STAAU gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0533 Ta0533 562381 562776 - conserved hypothetical protein similarity to unknown protein: hypothetical protein SCJ1.14c - Streptomyces coelicolor%3B PIR:T36947 gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0545 Ta0545 576673 577995 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF2259 - Archaeoglobus fulgidus%3B PIR:C69532 gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1161 Ta1161 1231740 1233143 - cationic amino acid transporter related protein similarity to known protein: HIGH-AFFINITY CATIONIC AMINO ACID TRANSPORTER-1 (CAT-1) (CAT1) (SYSTEMY+ BASIC AMINO ACID TRANSPORTER) (ECOTROPIC RETROVIRAL LEUKEMIARECEPTOR) (ERR) (ECOTROPIC RETROVIRUS RECEPTOR) - Rattus norvegicus (Rat)%3B SWISSPROT:CTR1_RAT gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1395 Ta1395 1441606 1442700 - mandelate racemase related protein similarity to known protein: mandelate racemase (EC 5.1.2.2) - Pseudomonas putida%3B PIR:A28700 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0046 Ta0046 44847 45767 + anaerobic sulfite reduction protein A related protein similarity to known protein: anaerobic sulfite reduction protein A - Salmonella typhimurium%3B PIR:A38453 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1013 Ta1013 1083302 1083910 + probable indolepyruvate ferredoxin oxidoreductase beta subunit similarity to known protein: INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORB (EC 1.-.-.-) (IOR)(INDOLEPYRUVATE FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT) - Pyrococcus kodakaraensis%3B SWISSPROT:IORB_PYRKOFunction: Catalyzes the oxidative decarboxylation of aryl pyruvates%2C which are generated by the transamination of aromatic amino acids%2C to the corresponding aryl acetyl-CoA. gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0275 Ta0275 288720 290870 + hypothetical protein no similarity gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1183 Ta1183 1254172 1254471 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1931 - Pyrococcus horikoshii%3B PIR:C71208 gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0448 Ta0448 476343 476720 + hypothetical protein no similarity gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0772 Ta0772 812222 813151 - probable 2-oxoacid ferredoxin oxidoreductase%2C beta chain strong similarity to known protein: 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) beta chain - Sulfolobus sp. (strain 7)%3B PIR:JC4920 gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0717 Ta0717 760198 760533 - hypothetical protein weak similarity to unknown protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0152 Ta0152 152888 153412 - probable peroxiredoxin strong similarity to known protein: Globodera rostochiensis mRNA for peroxiredoxin (tpx gene)%3B TREMBL:GRO243736_1 gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0373 Ta0373 394869 395975 + conserved hypothetical protein similarity to unknown protein: macrolide-efflux determinant related PAB0754 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75093 gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0896 Ta0896 963950 965584 - pyruvate kinase related protein similarity to known protein: pyruvate kinase (EC 2.7.1.40) [validated] - Bacillus licheniformis%3B PIR:JC4220 gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0130 Ta0130 127628 128743 - probable trehalose/maltose transport ATP-hydrolyzing subunit MalK strong similarity to known protein: MalK%3B Thermococcus litoralis trehalose/maltose transport ATP-hydrolyzing subunitMalK (malK) gene%2C complete cds%3B TREMBL:AF126010_1 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1305 Ta1305 1352081 1353037 + hypothetical protein weak similarity to unknown protein. Relation: weak similarity to probable single-stranded-DNA-specific exonuclease (recJ) - syphilis spirochete%2C PIR2:D71289. gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1392 Ta1392 1439466 1439753 + conserved hypothetical protein similarity to unknown protein: altronate dehydratase (EC 4.2.1.7) - Escherichia coli%3B PIR:H65097 gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1120 Ta1120 1188177 1189601 + probable cationic amino acid transporter similarity to known protein: amino acid transport protein AAT1 - Arabidopsis thaliana%3B PIR:S51171 gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0399 Ta0399 425500 426039 + inorganic pyrophosphatase known protein: inorganic pyrophosphatase (EC 3.6.1.1)%2C cytosolic [validated] - Thermoplasma acidophilum%3B PIR:S29313 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1223 Ta1223 1289466 1290314 - Rieske iron-sulfur protein SoxF related protein similarity to known protein: Rieske iron-sulfur protein soxF - Sulfolobus acidocaldarius%3B PIR:S56156ORF_prediction: The N-terminus of this ORF is 30 aa lomger than the ones of related proteins. Similarity is also apparent to plastoquinol--plastocyanin reductase (EC 1.10.99.1) iron-sulfur protein - Synechocystis sp.%2C here the N-terminus is just 10 amino acids shorter%2C and the similarity is not strong enough to suggest a shorter N-terminus for the Thermoplasma ORF.. gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0706 Ta0706 748828 749121 - hypothetical protein weak similarity to known protein. Relation: weak similarity to dolichyl phosphoryl mannose synthase - smut fungus (Ustilago maydis)%3B PIR2:S71642. gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0401 Ta0401 426424 427284 + hypothetical protein no similarity gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0182 Ta0182 185078 185479 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein MTH544 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:H69171 gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0811 Ta0811 864725 865888 + glycine hydroxymethyltransferase related protein similarity to known protein: glycine hydroxymethyltransferase (EC 2.1.2.1) - Methanobacterium thermoautotrophicum (strain Marburg)%3B PIR:S62190Function: involved in glycine%2C serine and threonine metabolism%2C also involved in vitamin B6 metabolism. gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1184 Ta1184 1254531 1254992 + hypothetical membrane protein weak similarity to unknown protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0514 Ta0514 543482 544270 + lipoate protein ligase related protein similarity to known protein: LIPOATE-PROTEIN LIGASE A (EC 6.-.-.-) - Escherichia coli%3B SWISSPROT:LPLA_ECOLI gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term= 1340143 1340223 + tRNA-Ser Predicted Ser tRNA (Anticodon TGA) tRNA rna34 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1037 Ta1037 1109167 1110249 + proline dipeptidase related protein similarity to known protein: Lactobacillus delbrueckii subsp. bulgaricus pepQ%2C pepR1 genes%3B TREMBL:LDBPEPQ_1 gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0118 Ta0118 111964 112593 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0406 - Archaeoglobus fulgidus%3B PIR:F69300 gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1318 Ta1318 1365786 1366655 + phosphoribosylformylglycinamidine synthase I related protein similarity to known protein: PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE (EC 6.3.5.3) (FGAMSYNTHASE) (FORMYLGLYCINAMIDE RIBOTIDE AMIDOTRANSFERASE) (FGARAT) - Escherichia coli%3B SWISSPROT:PURL_ECOLI gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0096 Ta0096 90954 91979 - hypothetical protein weak similarity to known protein. Relation: weak similarity to GLUTAMATE-RICH PROTEIN GRP%2C Bacillus firmus%2C SWISSPROT:GRPA_BACFI. gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term= 1504910 1504981 + tRNA-Ala Predicted Ala tRNA (Anticodon TGC) tRNA rna44 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0654 Ta0654 687789 688412 + precorrin-8X methylmutase related protein similarity to known protein: PRECORRIN-8X METHYLMUTASE (EC 5.4.1.2) (PRECORRIN ISOMERASE) - Salmonella typhimurium%3B SWISSPROT:CBIC_SALTYORF_prediction: This ORF might be 33 aa longer%2C however%2C codon usage and frequency of rare codons support the current gene prediction.. gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0876 Ta0876 941744 942172 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein yxiE N17E [imported] - Bacillus subtilis%3B PIR:A70077 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0090 Ta0090 87252 88268 - probable phosphoribosyl-aminoimidazole synthetase strong similarity to known protein: Lactococcus lactis cremoris ClpB chaperone homolog (clpB) and phosphoribosylformylglycinamide cyclo-ligase (pur5) genes%2C complete cds%3Band phosphoribosylglycinamide formyltransferase (pur3) gene%2C partial cds%3B TREMBL:AF016634_2 gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1357 Ta1357 1405784 1407202 - glycine dehydrogenase (decarboxylating) related protein%2C subunit 2 similarity to known protein: aminomethyltransferase (EC 2.1.2.10) - yeast (Saccharomyces cerevisiae)%3B PIR:S50917 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term= 1402849 1402921 + tRNA-Arg Predicted Arg tRNA (Anticodon CCG) tRNA rna38 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0806 Ta0806 858814 859884 + anthranilate synthase component I related protein similarity to known protein: anthranilate synthase (EC 4.1.3.27) component I - Clostridium thermocellum%3B PIR:JX0065 gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0094 Ta0094 90163 90666 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein APE0891 - Aeropyrum pernix (strain K1)%3B PIR:C72684 gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1186 Ta1186 1256393 1257043 + conserved hypthetical protein similarity to unknown protein: hypothetical protein - Synechocystis sp. (strain PCC 6803)%3B PIR:S76597. Relation: similarity to transcription regulator proteins. gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0224 Ta0224 228039 229499 + self-defense gene tcr3 related protein similarity to known protein: Streptomyces aureofaciens self-defense gene tcr3%2C complete cds%3B TREMBL:SATCR3_1 gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1361 Ta1361 1409945 1410877 + probable GMP synthase strong similarity to known protein: Lactococcus lactis fructokinase (scrK) gene%2C partial cds%3B and GMP synthase(guaA) gene%2C complete cds%3B TREMBL:AF058326_2 gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1258 Ta1258 1316438 1316950 - 50S RIBOSOMAL PROTEIN L5 known protein: ribosomal protein L5 - Thermoplasma acidophilum%3B PIR:T37468 gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0934 Ta0934 1002584 1003783 - acetylornithine deacetylase related protein similarity to known protein: acetylornithine deacetylase (EC 3.5.1.16) - Escherichia coli%3B PIR:B42377Function: Urea cycle and metabolism of amino groups. gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1266 Ta1266 1320177 1320632 - probable 50S ribosomal protein L22 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L22P (HHAL22) - Halobacterium halobium%3B SWISSPROT:RL22_HALHA gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term= 1103432 1103504 + tRNA-Gly Predicted Gly tRNA (Anticodon GCC) tRNA rna25 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1336 Ta1336 1385486 1386976 + type IV site-specific deoxyribonuclease Eco57I related protein similarity to known protein: type IV site-specific deoxyribonuclease (EC 3.1.21.-) Eco57I - Escherichia coli%3B PIR:S26426ORF_prediction: This peptide is homologous to the N-terminal part of heterologous type IV site-specific deoxyribonucleases. The coding region at the 3'-end of this orf corresponds to the respective C-terminal part. In Thermoplasma a stop codon separates the two halves and presumably the resulting fragments are not functional.. gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0886 Ta0886 952284 954944 - probable pyruvate orthophosphate dikinase strong similarity to unknown protein: pyruvate%2C orthophosphate dikinase (EC 2.7.9.1) - Thermotoga maritima (strain MSB8)%3B PIR:F72397Function: Pyruvate metabolism%2C Carbon ixation. gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0786 Ta0786 831528 832229 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB2110 - Pyrococcus abyssi (strain Orsay)%3B PIR:A75150 gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1166 Ta1166 1238928 1239380 + transcription regulator SlyA related protein similarity to known protein: TRANSCRIPTIONAL REGULATOR SLYA - Escherichia coli%3B SWISSPROT:SLYA_ECOLI gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0964 Ta0964 1031583 1031831 - NADH dehydrogenase%2C chain J related protein similarity to known protein: E.coli DNA sequence of nuo operon%3B TREMBL:ECNUOO_10Function: C-termial part of NADH dehydrogenase%2C chain J is missing. gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0310 Ta0310 332259 333260 + uroporphyrinogen decarboxylase related protein similarity to known protein: uroporphyrinogen decarboxylase - common tobacco%3B PIR2:S55732 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0887 Ta0887 955086 955793 + triacylglycerol lipase related protein similarity to known protein: triacylglycerol lipase (EC 3.1.1.3) - Moraxella sp.%3B PIR:S14276 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0315 Ta0315 336220 336930 - asparagine synthetase related protein similarity to known protein: Mus musculus asparagine synthetase mRNA%2C complete cds%3B TREMBL:MM38940_1 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0077 Ta0077 75950 77251 + ethanolamine permease related protein similarity to known protein: Rhodococcus erythropolis ORF1%2C ethanolamine permease (eutP)%2C ethanolamineammonia-lyase large subunit (eutB)%2C ethanolamine ammonia-lyase smallsubunit (eutC) genes%2C complete cds and ORF2 gene%2C partial cds%3B TREMBL:RSEUTPBC_2 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0824 Ta0824 881943 883025 + probable chorismate synthase strong similarity to known protein: chorismate synthase (EC 4.6.1.4) - Vibrio anguillarum%3B PIR:A55510 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1229 Ta1229 1295788 1296477 - probable Rieske iron-sulfur protein soxL strong similarity to known protein: Rieske iron-sulfur protein soxL precursor - Sulfolobus acidocaldarius%3B PIR:S71348 gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1050 Ta1050 1121051 1121956 - transport-ATP binding protein related protein similarity to known protein: Actinobacillus actinomycetemcomitans putative polyamine transport operon%2C complete sequence%3B TREMBL:AF077856_1 gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0116 Ta0116 109962 110648 + hypothetical protein weak similarity to known protein gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0812 Ta0812 865878 866966 + conserved hypothetical protein similarity to unknown protein: hypothetical protein MJ1404 - Methanococcus jannaschii%3B PIR:C64475 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0106 Ta0106 100367 100951 + conserved hypothetical protein similarity to unknown protein: yhcV homolog 2 - Archaeoglobus fulgidus%3B PIR:F69514 gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1471 Ta1471 1519106 1519819 - conserved hypothetical protein similarity to unknown protein: probable transposase - Streptomyces coelicolor%3B PIR:T36649. Relation: similarity to various putative transposases. gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1105 Ta1105 1176883 1177524 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein b1045 - Escherichia coli%3B PIR:B64847. Relation: Similar to the C-terminus of histone macroH2A1.1.. Function: The histone like portion of histone macroH2A1.1 is missing.. gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1136 Ta1136 1202560 1208805 - conserved hypothetical membrane protein similarity to unknown protein: transmembrane oligosaccharyl transferase homolog - Archaeoglobus fulgidus%3B PIR:D69297 gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1319 Ta1319 1366642 1367886 + cad protein (human)%2C dihydroorotase domain related protein similarity to known protein: CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATESYNTHASE (EC 6.3.5.5)%3B ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2)%3BDIHYDROOROTASE (EC 3.5.2.3)].CAD PROTEIN [INCLUDES: GLUTAMINE-DEPENDENT CARBAMOYL-PHOSPHATESYNTHASE (EC 6.3.5.5)%3B ASPARTATE CARBAMOYLTRANSFERASE (EC 2.1.3.2)%3BDIHYDROOROTASE (EC 3.5.2.3)] - Homo sapiens (Human).Homo sapiens (Human)%3B SWISSPROT:PYR1_HUMAN gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0831 Ta0831 893540 893962 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE1964 - Aeropyrum pernix (strain K1)%3B PIR:F72498. Relation: weak similarity to non-specific lipid transfer protein - rat%2C TREMBL:RNNSLIPTR_2. gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0599 Ta0599 630669 631166 + acyl-CoA hydrolase related protein similarity to known protein: HYPOTHETICAL 20.1 KDA PROTEIN IN DPPE-HMP INTERGENIC REGION (ORF1) - Bacillus subtilis%3B SWISSPROT:YKHA_BACSU gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0550 Ta0550 580828 581190 + hypothetical protein no similarity gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1308 Ta1308 1354542 1355138 - H+/K+-transporting ATPase chain C related protein similarity to known protein: H+/K+-exchanging ATPase (EC 3.6.1.36) chain C [validated] - Escherichia coli%3B PIR:PWECCK gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0320 Ta0320 341351 341692 - conserved hypothetical protein similarity to unknown protein gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term= 826120 826193 + tRNA-Met Predicted Met tRNA (Anticodon CAT) tRNA rna17 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0148 Ta0148 148326 149906 - cationic amino acid transporter 3 (HCAT3) related protein similarity to known protein gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0976 Ta0976 1042232 1045504 - xanthomonapepsin related protein similarity to known protein: xanthomonapepsin (EC 3.4.23.33) - Xanthomonas sp.%3B PIR:JC4900 gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0943 Ta0943 1012700 1012966 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1532 - Archaeoglobus fulgidus%3B PIR:C69441 gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1380 Ta1380 1426030 1427295 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein AF1590 - Archaeoglobus fulgidus%3B PIR:E69448 gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0628 Ta0628 658822 660030 + probable 2-ketovalerate ferredoxin oxidoreductase alpha-2 chain strong similarity to known protein: KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (EC 1.-.-.-) (VOR) (2-OXOISOVALERATE OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT) - Pyrococcus furiosus%3B SWISSNEW:VORA_PYRFUFunction: Pyruvate metabolism%2C Propanoate metabolism%2C Butanoate metabolism%2C Reductive carboxylate cycle (CO2 fixation). gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1454 Ta1454 1501289 1501564 + hypothetical protein no similarity gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1098 Ta1098 1168678 1169697 - cell division protein pelota related protein similarity to known protein: PELOTA PROTEIN - Drosophila melanogaster (Fruit fly)%3B SWISSPROT:PELO_DROME gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0803 Ta0803 856642 857295 + tryptophan synthase alpha chain related protein similarity to known protein: TRYPTOPHAN SYNTHASE ALPHA CHAIN (EC 4.2.1.20).TRYPTOPHAN SYNTHASE ALPHA CHAIN (EC 4.2.1.20) - Sulfolobus solfataricus.Sulfolobus solfataricus%3B SWISSPROT:TRPA_SULSO gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0519 Ta0519 548514 549803 + probable asparaginyl--tRNA synthetase strong similarity to known protein: asparagine--tRNA ligase (EC 6.1.1.22) asnS2 - Lactobacillus delbrueckii subsp. bulgaricus%3B PIR:S71074 gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0978 Ta0978 1046660 1047532 - conserved hypothetical protein similarity to unknown protein: tetrahydropteroyltriglutamate methyltransferase PAB2361 - Pyrococcus abyssi (strain Orsay)%3B PIR:B75138 gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1475 Ta1475 1522389 1524701 - ribonucleotide reductase known protein: ribonucleotide reductase (EC 1.17.4.-)%2C B12-dependent - Thermoplasma acidophilum%3B PIR:T37459ORF_prediction: Codon preference calculations based on the DNA sequence from the Thermoplasma acidophilum genome sequencing project and the DNA sequence from TREMBL:TAU73619_1 clearly favour a C-Terminus which is 150 amino acids shorter than the one of TREMBL:TAU73619_1. This predicted C-Terminus is in accordance with the sequence generated by the Thermoplasma genome sequencing project. In addition%2C this ORFs is predicted to start two amino acids earlier%2C but this prediction clearly awaits experimental verification. This ORF does not include an intein%2C as does e.g. the related probable ribonucleoside-diphosphate reductase from Pyrococcus horikoshii.. gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0439 Ta0439 464382 465920 + piperideine-6-carboxilic acid dehydrogenase related protein strong similarity to known protein: Malus domestica mRNA for protein abundantly expressed during apple fruitdevelopment%2C complete cds%3B TREMBL:D88434_1. Relation: strong similarity to a protein abundantly expressed during apple fruit development%2C function not known%2C TREMBL:D88434_1. gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0675 Ta0675 710658 711308 + conserved hypothetical protein weak similarity to unknown protein gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0433 Ta0433 459791 460201 - probable 50S ribosomal protein L13 strong similarity to known protein: ribosomal protein L13 [similarity] - Haloarcula marismortui%3B PIR2:B41715 gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1477 Ta1477 1525894 1526547 + formiminotransferase cyclodeaminase related protein similarity to known protein: Gallus gallus mRNA for formiminotransferase cyclodeaminase%3B TREMBL:GGA224473_1 gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term= 1079324 1079396 + tRNA-Thr Predicted Thr tRNA (Anticodon GGT) tRNA rna24 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1345 Ta1345 1394555 1395643 - hypothetical membrane protein weak similarity to unknown protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1338 Ta1338 1388365 1388799 + hypothetical membrane protein no similarity gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0061 Ta0061 57809 58564 - probable 3-HYDROXYBUTYRYL-COA DEHYDRATASE strong similarity to known protein: 3-HYDROXYBUTYRYL-COA DEHYDRATASE (EC 4.2.1.55) (CROTONASE) - Clostridium acetobutylicum%3B Swissprot:CRT_CLOAB. Relation: strong similarity to 3-HYDROXYBUTYRYL-COA DEHYDRATASE (EC 4.2.1.55) (CROTONASE)%2C Clostridium acetobutylicum%2C Swissprot:CRT_CLOAB. Function: Fatty acid biosynthesis (path 2)%2C Fatty acid metabolism%2C Valine%2C leucine and isoleucine degradation%2C Lysine degradation%2C Tryptophan metabolism%2C beta-Alanine metabolism%2C Propanoate metabolism%2C Butanoate metabolism. gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1016 Ta1016 1085996 1087357 + DNA repair protein RAD25 related protein similarity to known protein: Saccharomyces cerevisiae DNA helicase (RAD25) gene%2C complete cds%3B TREMBL:SCRAD25A_1 gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1237 Ta1237 1302862 1303776 - conserved hypothetical GTP-binding protein similarity to unknown protein: hypothetical protein MJ0325 - Methanococcus jannaschii%3B PIR:E64340. Relation: similarity to Elongation factor Tu (EF-Tu). gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0456 Ta0456 483784 485187 - malate oxidoreductase (malic enzyme) related protein similarity to known protein: malate dehydrogenase (oxaloacetate-decarboxylating) (EC 1.1.1.38) - Bacillus stearothermophilus%3B PIR:DEBSXS gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0134 Ta0134 130895 131941 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0751 - Pyrococcus horikoshii%3B PIR:H71122 gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1256 Ta1256 1315873 1316262 - probable 30S ribosomal protein S8 strong similarity to known protein: ribosomal protein S8 - Methanococcus vannielii%3B PIR:R3MX8 gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1155 Ta1155 1226896 1227822 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF0939 - Archaeoglobus fulgidus%3B PIR:C69367 gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1503 Ta1503 1558661 1559221 + hypothetical membrane protein no similarity gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0002 Ta0002 788 1858 + ATP synthase (subunit C) related protein similarity to known protein: ATP SYNTHASE%2C SUBUNIT C (EC 3.6.1.34) - Halobacterium volcanii (Haloferax volcanii)%3B SWISSPROT:ATPC_HALVO gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0028 Ta0028 25735 26091 + hypothetical protein weak similarity to known protein. Relation: weak similarity to TREMBL:SEABCTS_3. gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1162 Ta1162 1233327 1234970 - probable methionyl-tRNA synthetase strong similarity to known protein: METHIONYL-TRNA SYNTHETASE%2C CYTOPLASMIC (EC 6.1.1.10) (METHIONINE--TRNALIGASE) (METRS) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:SYMC_YEAST gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1294 Ta1294 1344814 1345536 + rRNA processing protein (yeast RRP45) related protein similarity to known protein: probable membrane protein YDR280w - yeast (Saccharomyces cerevisiae)%3B PIR2:S70136 gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term= 192407 192481 + tRNA-Arg Predicted Arg tRNA (Anticodon TCT) tRNA rna3 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0426 Ta0426 453757 454338 - hypothetical membrane protein no similarity gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0459 Ta0459 487121 487603 - conserved hypothetical protein weak similarity to unknown protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0560 Ta0560 588482 590137 + hypothetical membrane protein similarity to unknown protein: hypothetical protein PH0559 - Pyrococcus horikoshii%3B PIR:C71170 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0866 Ta0866 933196 933537 - thioredoxin related protein similarity to known protein: thioredoxin - coryneform bacterium ATCC11425%3B PIR:TXFK gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1019 Ta1019 1089841 1090098 + MoaD (involved in molybdopterin synthesis) related protein similarity to known protein: Mus musculus molybdopterin-synthase small and large subunit (Mocs2)bicistronic mRNA%2C complete cds%3B TREMBL:AF091872_1 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0901 Ta0901 970328 971518 + export type III nucleotide binding protein (Vir B11) related protein similarity to known protein: Helicobacter pylori export type III nucleotide binding protein (virB11)%2C ATPase (fliI) and membrane protein (fliQ) genes%2C complete cds%3B TREMBL:U75584_1 gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0402 Ta0402 427217 429769 - hypothetical protein weak similarity to unknown protein gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0183 Ta0183 185492 186208 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PH1681 - Pyrococcus horikoshii%3B PIR:A71049 gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0488 Ta0488 519243 520472 + hypothetical protein weak similarity to unknown protein. Relation: similarity to protein kinases. gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0650 Ta0650 684243 685460 - probable argininosuccinate synthase strong similarity to known protein: argininosuccinate synthase (EC 6.3.4.5) - Methanococcus vannielii%3B PIR:AJMXRV gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0230 Ta0230 235444 236592 - probable isovaleryl-CoA dehydrogenase strong similarity to known protein: A.thaliana mRNA for isovaleryl-CoA dehydrogenase%3B TREMBL:ATISOVAL_1 gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0001 Ta0001 229 786 + ATP synthase (subunit E) related protein similarity to known protein: ATP SYNTHASE%2C SUBUNIT E (EC 3.6.1.34) - Methanosarcina mazei%3B SWISSPROT:ATPE_METMA gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0164 Ta0164 167608 168378 - hypothetical membrane protein no similarity gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0442 Ta0442 468728 469939 - transport membrane protein related protein similarity to known protein: Acinetobacter sp. ADP1 cis%2C cis-muconate transport protein MucK (mucK) andelectron transfer flavoprotein-ubiquinone oxidoreductase homolog genes%2C complete cds%3B TREMBL:ACU87258_2 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1152 Ta1152 1223110 1223562 + hypothetical protein no similarity gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0289 Ta0289 308744 309280 + conserved hypothetical protein similarity to unknown protein: MJ0653 homolog PH0267 - Pyrococcus horikoshii%3B PIR:D71451 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0347 Ta0347 368879 369544 + conserved hypothetical protein similarity to unknown protein: glutamate--tRNA ligase (EC 6.1.1.17) gltX - Mycoplasma pneumoniae (strain ATCC 29342)%3B PIR:S73490 gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0434 Ta0434 460206 460568 - probable 50S ribosomal protein L18 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L18E (HL29) (L19) - Haloarcula marismortui (Halobacterium marismortui)%3B SWISSPROT:R18E_HALMA gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0059 Ta0059 54976 56178 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB2094 - Pyrococcus abyssi (strain Orsay)%3B PIR:G75152 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1452 Ta1452 1499736 1500767 + NDP-hexose 2%2C 3-enoyl reductase TylCII related protein similarity to known protein: Streptomyces fradiae NDP-hexose 2%2C 3-enoyl reductase TylCII (tylCII)%2C NDP-hexose 4-ketoreductase TylCIV (tylCIV)%2C NDP-hexose3-C-methyltransferase TylCIII (tylCIII)%2C mycarosyl transferase TylCV(tylCV)%2C and NDP-hexose 3%2C 5-(or5-) epimerase TylCVII (tylCVII) genes%2C complete cds%3B TREMBL:AF147704_1 gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0325 Ta0325 345647 346210 + HAM1 protein related similarity to known protein: 6-N-hydroxylaminopurine sensitivity-controlling protein HAM1 [validated] - yeast (Saccharomyces cerevisiae)%3B PIR2:S57088 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0006 Ta0006 5825 6466 + vacuolar proton-ATPase subunit D related protein similarity to known protein: Homo sapiens vacuolar proton pump delta polypeptide (VATD) mRNA%2C completecds%3B TREMBL:AF145316_1 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0255 Ta0255 261952 263001 + hypothetical protein no similarity gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1185 Ta1185 1255120 1256265 + Na+/H+ antiporter related protein similarity to known protein: Na+/H+-exchanging protein NapA - Enterococcus hirae%3B PIR:A42111 gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1418 Ta1418 1466834 1468600 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB1903 - Pyrococcus abyssi (strain Orsay)%3B PIR:C75112 gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0341 Ta0341 361606 363402 - glycogen debranching enzyme isoform 1 (agl) related protein similarity to known protein: Homo sapiens AGL gene for glycogen-debranching enzyme%2C exon 35 and completecds%3B TREMBLNEW:AB035443_1 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0160 Ta0160 162854 163858 - serotonin receptor related protein weak similarity to known protein gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0728 Ta0728 771684 772220 - hypothetical protein weak similarity to known protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0990 Ta0990 1059341 1060063 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein aq_926 - Aquifex aeolicus%3B PIR:C70380 gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1066 Ta1066 1137788 1140067 - phosphoribosylformylglycinamidine synthase related protein similarity to known protein: Mycobacterium tuberculosis phosphoribosylformylglycinamidine synthase(purL) gene%2C complete cds%3B TREMBLNEW:MT34956_1 gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1278 Ta1278 1331056 1332060 - hydrogenase expression/formation protein (Anabaena hupE) related protein similarity to known protein: Anabaena PCC7120 HupD (hupD) gene%2C partial cds%2C and HupE (hupE)%2C HupA(hupA) and HupB (hupB) genes%2C complete cds%3B TREMBL:AF006594_2 gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0311 Ta0311 333257 334183 + ferrochelatase related protein similarity to known protein: FERROCHELATASE PRECURSOR (EC 4.99.1.1) (PROTOHEME FERRO-LYASE) (HEMESYNTHETASE) - Xenopus laevis (African clawed frog)%3B SWISSPROT:HEMZ_XENLA gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1047 Ta1047 1118604 1119566 + hypothetical protein weak similarity to known protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0534 Ta0534 563460 564713 + peptide chain release factor subunit 1 related protein similarity to known protein: translation releasing factor eRF-1 - African clawed frog%3B PIR:A48061 gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0110 Ta0110 102568 103530 + conserved hypothetical protein similarity to unknown protein gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1226 Ta1226 1291969 1293288 + conserved hypothetical protein similarity to unknown protein: hypothetical protein APE2147 - Aeropyrum pernix (strain K1)%3B PIR:F72521 gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0678 Ta0678 714940 715560 - hypothetical protein weak similarity to unknown protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1147 Ta1147 1218512 1219870 - probable cysteinyl-tRNA synthetase strong similarity to known protein: E. coli cysS gene for cysteinyl-tRNA synthetase%3B TREMBL:ECCYSSG_1 gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0676 Ta0676 712070 714511 + penicillin amidase precursor related protein similarity to known protein: penicillin amidase (EC 3.5.1.11) precursor - Escherichia coli%3B PIR:PNECA gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1154 Ta1154 1225996 1226748 - 2-hydroxyhepta-2%2C 4-diene-1%2C 7-dioate isomerase related protein similarity to known protein: decarboxilase/isomer%3B E.coli hpa[G%2C R%2C E%2C D%2C F%2C H%2C I%2C X%2C A%2C B%2C C] genes%3B TREMBL:EC4HPADNA_2Function: possibly involved in degradation or aromatic compounds. gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0789 Ta0789 837170 838945 + amino acid transport protein related protein similarity to known protein: amino acid transporter homolog ybeC - Bacillus subtilis%3B PIR:D69748 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0421 Ta0421 446656 448599 - probable acetyl-coenzyme-A synthetase strong similarity to known protein: acetate--CoA ligase (EC 6.2.1.1) [validated] - Methanothrix soehngenii%3B PIR:A41043 gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1500 Ta1500 1553758 1554750 + probable replication factor C%2C 40 KD subunit strong similarity to known protein: ACTIVATOR 1 40 KDA SUBUNIT (REPLICATION FACTOR C 40 KDA SUBUNIT) (A140 KDA SUBUNIT) (RF-C 40 KDA SUBUNIT) (RFC40) - Homo sapiens (Human)%3B SWISSPROT:AC14_HUMANORF_prediction: This ORF does not include an intein%2C as does for example the related probable replication factor C subunit from Pyrococcus horikoshii.. gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0044 Ta0044 40926 42548 - probable CTP synthase strong similarity to unknown protein: probable CTP synthase - Pyrococcus horikoshii%3B PIR:H71189 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0119 Ta0119 112664 113377 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE related protein similarity to known protein: RIBOSE-PHOSPHATE PYROPHOSPHOKINASE (EC 2.7.6.1) (PHOSPHORIBOSYLPYROPHOSPHATE SYNTHETASE).RIBOSE-PHOSPHATE PYROPHOSPHOKINASE (EC 2.7.6.1) (PHOSPHORIBOSYLPYROPHOSPHATE SYNTHETASE) - Salmonella typhimurium.Salmonella typhimurium%3B SWISSPROT:KPRS_SALTY gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0135 Ta0135 131975 132361 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0047 - Pyrococcus horikoshii%3B PIR:D71223 gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0966 Ta0966 1032256 1033278 - NADH dehydrogenase%2C subunit I related protein similarity to known protein: NADH-PLASTOQUINONE OXIDOREDUCTASE CHAIN 1%2C CHLOROPLAST (EC 1.6.5.3) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:NU1C_ARATH gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1274 Ta1274 1326038 1327573 + sterol-regulatory element-binding proteins intramembrane protease related protein similarity to known protein: STEROL-REGULATORY ELEMENT-BINDING PROTEINS INTRAMEMBRANE PROTEASE(EC 3.4.24.-) (SITE-2 PROTEASE) - Homo sapiens (Human)%3B SWISSPROT:MS2P_HUMANFunction: similar to S2P%2C that encodes a putative metalloprotease required for intramembrane proteolysis of sterol-regulatory element-binding proteins (SREBPs) at Site-2. SREBPs are membrane-bound transcription factors that activate genes regulating cholesterol metabolism. The active NH2-terminal domains of SREBPs are released from membranes by sequential cleavage at two sites: Site-1%2C within the lumen of the endoplasmic reticulum%3B and Site-2%2C within a transmembrane segment. The human S2P gene was cloned by complementation of mutant CHO cells that cannot cleave SREBPs at Site-2 and are cholesterol auxotrophs. S2P defines a new family of polytopic membrane proteins that contain an HEXXH sequence characteristic of zinc metalloproteases. Mutation of the putative zinc-binding residues abolishes S2P activity. S2P encodes an unusual metalloprotease that cleaves proteins within transmembrane segments. gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0214 Ta0214 215836 217071 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1677 - Archaeoglobus fulgidus%3B PIR:D69459 gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0592 Ta0592 624861 625796 - hypothetical membrane protein weak similarity to known protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1124 Ta1124 1193067 1193684 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1379 - Pyrococcus horikoshii%3B PIR:E71010 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term= 1451307 1451378 + tRNA-Ala Predicted Ala tRNA (Anticodon GGC) tRNA rna40 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0948 Ta0948 1018163 1018588 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH729 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:D69197. Relation: ethylene-responsive transcriptional coactivator related protein conserved hypothetical protein TREMBLNEW:AF096246_1. gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0576 Ta0576 605037 606890 - protoporphyrin IX magnesium chelatase related protein similarity to known protein: protoporphyrin IX magnesium chelatase (EC 4.99.1.-) ChlI - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:E69173 gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0920 Ta0920 989861 990820 - regulatory protein moxR related protein similarity to known protein: methanol dehydrogenase regulatory protein moxR [validated] - Paracoccus denitrificans%3B PIR:D41377 gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0233 Ta0233 240208 240927 - gliding motility protein related similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene%2C completecds%3B and unknown genes%3B TREMBL:AF007381_3 gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0529 Ta0529 558218 559351 + probable aspartate aminotransferase strong similarity to known protein: aspartate transaminase (EC 2.6.1.1) - Sulfolobus solfataricus%3B PIR:S07088Function: Glutamate metabolism%2C Alanine and Aspartate metabolism Cysteine metabolism%2C Carbon fixation. gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0795 Ta0795 850102 850737 - probable sugar fermentation stimulation protein similarity to unknown protein: sugar fermentation stimulation protein - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:A69070 gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0100 Ta0100 96385 96576 + hypothetical protein no similarity gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1322 Ta1322 1368831 1370873 - surface antigen genes (Methanosarcina mazei) related protein similarity to known protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1419 Ta1419 1468613 1469545 + conserved hypothetical protein similarity to unknown protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0236 Ta0236 243800 244420 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0010 - Pyrococcus horikoshii%3B PIR:G71218 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0695 Ta0695 736120 737271 + conserved hypothetical protein weak similarity to known protein. Relation: weak similarity to putative glcnac transferase - Escherichia coli%3B TREMBL:AF013583_4. gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1360 Ta1360 1409327 1409755 - hypothetical protein weak similarity to unknown protein. Relation: weak similarity to hypothetical protein APE0659 - Aeropyrum pernix%2C PIR2:G72653. gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0517 Ta0517 547065 547277 - ferredoxin 2[4Fe-4S] related protin similarity to known protein: ferredoxin 2[4Fe-4S] - Rhodospirillum rubrum%3B PIR:FEQFR gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0750 Ta0750 793725 794672 + probable 2-hydroxyhepta-2%2C 4-diene-1%2C 7-dioate isomerase similarity to known protein: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase (EC 5.3.3.10) - Escherichia coli%3B PIR:S38348 gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0169 Ta0169 173296 174453 + citrate synthase known protein: citrate (si)-synthase (EC 4.1.3.7) - Thermoplasma acidophilum%3B PIR:YKYT gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0147 Ta0147 145150 146316 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1222 - Pyrococcus horikoshii%3B PIR:H71065 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0227 Ta0227 231508 232125 + conserved hypothetical protein similarity to unknown protein: hypothetical protein Rv2143 - Mycobacterium tuberculosis (strain H37RV)%3B PIR:C70578. Relation: weak similarity to orotate phosphoribosyltransferase(pyrE)%2C Pyrococcus abyssi%2C TREMBL:AF058713_1. gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0891 Ta0891 958650 959495 + endonuclease IV related protein similarity to known protein: E.coli nfo gene encoding endonuclease IV%2C complete cds%3B TREMBL:ECNFO_1 gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0471 Ta0471 502189 502737 + small heat shock protein (hsp20) related protein weak similarity to known protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1455 Ta1455 1501611 1502666 + conserved hypothetical protein strong similarity to unknown protein: acyl carrier protein synthase - Methanococcus jannaschii%3B PIR:A64493 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1224 Ta1224 1290726 1291100 - hypothetical protein weak similarity to unknown protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1474 Ta1474 1521506 1522300 + conserved hypothetical protein similarity to unknown protein gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0531 Ta0531 560296 561438 + probable cystathionine gamma-synthase strong similarity to known protein: Arabidopsis thaliana gene for cystathionine gamma-synthase%2C complete cds%3B TREMBL:AB010888_1Function: Involved in Cysteine metabolism%2C Methionine metabolism%2C Glycine%2C serine and threonine metabolism%2C Selenoamino acid metabolism. EC Numbers and enzyme names are mixed up%2C homologs are called cystathionine gamma-synthase (EC 4.2.99.9) and cystathionine gamma lyase (EC 4.4.1.-).. gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0655 Ta0655 688409 689161 + probable cobalamin biosynthesis precorrin-3 methylase similarity to known protein: Bacillus megaterium 16kb genomic sequence%2C cobalamin operon%3B TREMBL:BMAJ758_2 gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0030 Ta0030 26945 28120 + probable acetyl CoA synthase strong similarity to known protein: P.furiosus vorA%2C vorB%2C vorD%2C porA%2C porB%2C porC%2C porD and ORFZ genes%3B TREMBL:PFPORVOR_4Function: Reductive carboxylate cycle (CO2 fixation). gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1410 Ta1410 1461477 1462211 - ferrichrome ABC transporter (ATP-binding p) related protein similarity to known protein: E.coli fhuC and fhuD genes involved in Fe3+ transport%3B TREMBL:ECFHUACD_2 gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1351 Ta1351 1401125 1401778 - purine phosphoribosyltransferase related protein similarity to known protein: Thermus flavus askA askB and gpt genes for aspartokinase alpha-2 beta-2 andpurine phosphoribosyltransferase%2C complete cds%3B TREMBL:TFASKAB_3 gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0955 Ta0955 1024242 1025204 - probable porphobilinogen synthase strong similarity to known protein: DELTA-AMINOLEVULINIC ACID DEHYDRATASE (EC 4.2.1.24) (PORPHOBILINOGENSYNTHASE) (ALAD) (ALADH) - Escherichia coli%3B SWISSPROT:HEM2_ECOLI gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1203 Ta1203 1272678 1273442 - translation initiation factor eIF-2%2C alpha subunit related protein similarity to known protein: translation initiation factor eIF-2 alpha chain - yeast (Saccharomyces cerevisiae)%3B PIR:A32108 gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0981 Ta0981 1050421 1050819 + transcription regulator LrpA related protein similarity to known protein: Pyrococcus furiosus glutamate dehydrogenase (gdh) and transcriptionalregulator LrpA genes%2C complete cds%3B TREMBL:PYWGDH_2 gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0088 Ta0088 86337 86792 + gliding motility protein related similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene%2C completecds%3B and unknown genes%3B TREMBL:AF007381_3 gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0712 Ta0712 755846 756049 - hypothetical protein weak similarity to known protein. Relation: weak similarity to 40 kda membrane-bound galactosyl- transferase - Shigella dysenteriae%3B S73325_2. gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0379 Ta0379 404736 405083 - hypothetical protein weak similarity to unknown protein gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0185 Ta0185 187966 188619 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1932 - Pyrococcus horikoshii%3B PIR:D71208 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0643 Ta0643 675900 676481 - conserved hypothetical protein weak similarity to known protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0026 Ta0026 23443 24393 - threonine synthase related protein similarity to known protein: threonine synthase (EC 4.2.99.2) thrC - Bacillus subtilis%3B PIR2:A25364Function: Glycine%2C serine and threonine metabolism. gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0538 Ta0538 567649 568770 - conserved iron-sulfur protein similarity to unknown protein: probable iron-sulfur protein AF0811 [similarity] - Archaeoglobus fulgidus%3B PIR:C69351 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0709 Ta0709 751936 754050 - hypothetical protein weak similarity to known protein. Relation: weak similarity to endopeptidase K (EC 3.4.21.64) precursor - imperfect fungus (Tritirachium album)%3B PIR:SUTIKA. gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0305 Ta0305 327607 327933 + hypothetical protein no similarity gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1383 Ta1383 1428914 1429390 + hypothetical protein weak similarity to unknown protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1391 Ta1391 1437699 1439078 - phosphate transporter related protein similarity to known protein: phosphate transport protein - Glomus versiforme%3B PIR2:S67491 gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0865 Ta0865 931653 933167 - ABC transporter related protein similarity to known protein: UBIQUINONE BIOSYNTHESIS PROTEIN AARF (AMINOGLYCOSIDE ACETYLTRANSFERASEREGULATOR) - Providencia stuartii%3B SWISSPROT:AARF_PROST gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0923 Ta0923 991843 994596 - hypothetical protein weak similarity to unknown protein gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0478 Ta0478 507617 508825 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein c0607 - Sulfolobus solfataricus%3B PIR:S74008 gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0213 Ta0213 214471 215850 + zeste-white 4 related membrane protein similarity to known protein: EGGHEAD PROTEIN (ZESTE-WHITE 4 PROTEIN).EGGHEAD PROTEIN (ZESTE-WHITE 4 PROTEIN) - Drosophila melanogaster (Fruit fly).Drosophila melanogaster (Fruit fly)%3B SWISSPROT:EGH_DROME gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0308 Ta0308 329421 330878 - hypothetical protein no similarity gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0967 Ta0967 1033293 1034402 - probable NADH dehydrogenase%2C chain D strong similarity to known protein: NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT PRECURSOR (EC 1.6.5.3)(EC 1.6.99.3) (COMPLEX I-49KD) (CI-49KD) - Homo sapiens (Human)%3B SWISSPROT:NUCM_HUMAN gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0929 Ta0929 998167 998781 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0043 - Pyrococcus horikoshii%3B PIR:H71222 gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0572 Ta0572 602049 602936 + porphobilinogen deaminase related protein similarity to known protein: hydroxymethylbilane synthase (EC 4.3.1.8) - Aquifex aeolicus%3B PIR:A70324 gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0571 Ta0571 600772 602052 + probable glutamate-1-semialdehyde 2%2C 1-aminomutase strong similarity to known protein: glutamate-1-semialdehyde 2%2C 1-aminomutase (EC 5.4.3.8) - common tobacco%3B PIR:S21455 gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1209 Ta1209 1276933 1277622 - trehalose-6-phosphate phosphatase related protein similarity to known protein: trehalose-6-phosphate phosphatase homolog T1P17.20 - Arabidopsis thaliana%3B PIR:T07635 gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0992 Ta0992 1062183 1063556 + cytochrome bd ubiquinol oxidase related protein similarity to known protein: Bacillus stearothermophilus genes for bd-type quinol oxidase subunit I andsubunit II%2C complete cds%3B TREMBL:AB016894_1 gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0073 Ta0073 71767 72414 + orotidine-5'-monophosphate decarboxylase (pyrF) known protein: probable orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) - Thermoplasma acidophilum%3B PIR:T37332ORF_prediction: This entry based on the sequence of the Thermoplasma genome sequencing project differs from TREMBL:AF038845_2. It reveals an additional methionine at its N-terminus and an amino acid exchange further C-terminally.. gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1114 Ta1114 1184293 1184496 - probable 50S ribosomal protein L24E strong similarity to known protein: ribosomal protein L24.eR [validated] - Haloarcula marismortui%3B PIR:R6HS21 gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1272 Ta1272 1324080 1324940 - hypothetical protein similarity to unknown protein: hypothetical protein b2304 - Escherichia coli (strain K-12)%3B PIR:F65002. Relation: similarity to E. coli putative sugar nucleotide epimerase (GB:AE000319) and to members of the PIR cell division inhibitor yfhF-Superfamily. gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0863 Ta0863 929261 931180 + hypothetical membrane protein no similarity gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0952 Ta0952 1021005 1021982 - probable malate dehydrogenase strong similarity to known protein: MALATE DEHYDROGENASE (EC 1.1.1.37) - Chlorobium vibrioforme%3B SWISSPROT:MDH_CHLVI gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0619 Ta0619 650686 651555 - probable 2-keto-3-deoxy gluconate aldolase strong similarity to known protein: Sulfolobus solfataricus gene encoding 2-keto-3-deoxy gluconate aldolase%3B TREMBL:SSO224174_1. Relation: shows also similarity to dihydrodipicolinate synthase (EC 4.2.1.52) dapA - Bacillus subtilis%2C PIR:E46665. gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1349 Ta1349 1398817 1400082 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:E72235. Relation: weak similarity to plasma-cell membrane glycoprotein pc-1 - human%2C SWISSPROT:PC1_HUMAN. gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1062 Ta1062 1133398 1134843 + multidrug resistance transporter related protein similarity to known protein: Bacillus subtilis DNA for multidrug transporter%2C complete cds%3B TREMBL:BSD0981_1 gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1076 Ta1076 1149438 1149806 + Gim%2C alpha subunit related protein weak similarity to known protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0052 Ta0052 50229 50603 + apoptosis-related Tfar19 related protein similarity to known protein: TFAR19 protein - human%3B PIR:JG0192 gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0267 Ta0267 276209 276571 + hypothetical protein no similarity gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1441 Ta1441 1490707 1491465 + conserved hypothetical protein similarity to unknown protein: probable 3-isopropylmalate dehydratase - Archaeoglobus fulgidus%3B PIR:B69406 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1434 Ta1434 1483526 1484059 + conserved hypothetical protein strong similarity to unknown protein gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0726 Ta0726 770189 770860 - hypothetical membrane protein no similarity gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1295 Ta1295 1345542 1345784 + probable ribosomal protein L37 strong similarity to known protein: ribosomal protein L37a.e%2C cytosolic - yeast (Saccharomyces cerevisiae)%3B PIR:S54068 gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1036 Ta1036 1108358 1109095 - DNA repair protein RAD51 related protein similarity to known protein: RAD51 protein - yeast (Saccharomyces cerevisiae)%3B PIR:A44348 gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0115 Ta0115 109314 109754 + hypothetical protein weak similarity to unknown proteinFunction: possibly a transcription regulator ?. gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1117 Ta1117 1185493 1186311 + homoprotocatechuate 2%2C 3-dioxygenase related protein similarity to known protein: 3%2C 4-DIHYDROXYPHENYLACETATE 2%2C 3-DIOXYGENASE (EC 1.13.11.15)(HOMOPROTOCATECHUATE 2%2C 3-DIOXYGENASE) (HPC DIOXYGENASE) - Escherichia coli%3B SWISSPROT:HPCB_ECOLIFunction: PATHWAY: FIRST STEP IN HOMOPROTOCATECHUATE CATABOLIC PATHWAY. gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1176 Ta1176 1247467 1247934 - hypothetical protein no similarity gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0389 Ta0389 413685 413960 + DNA-DIRECTED RNA POLYMERASE CHAIN H related protein similarity to known protein: DNA-DIRECTED RNA POLYMERASE SUBUNIT H (EC 2.7.7.6) - Sulfolobus acidocaldarius%3B SWISSPROT:RPOH_SULAC gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0210 Ta0210 211555 212691 + hypothetical membrane protein weak similarity to unknown protein gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1324 Ta1324 1372390 1373310 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0751 - Pyrococcus horikoshii%3B PIR:H71122. Relation: weak similarity to cymJ protein (starch utilisation pathway) - Klebsiella oxytoca%2C PIR2:S63621. gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1330 Ta1330 1379301 1380194 - probable ornithine carbamoyltransferase strong similarity to known protein: ORNITHINE CARBAMOYLTRANSFERASE%2C ANABOLIC (EC 2.1.3.3) (OTCASE) (OTC) - Thermus aquaticus (subsp. thermophilus)%3B SWISSPROT:OTCA_THETH gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0921 Ta0921 990798 991286 - hypothetical protein weak similarity to unknown protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0259 Ta0259 266725 268491 + probable pyruvate ferredoxin oxidoreductase%2C alpha subunit strong similarity to known protein: 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain [validated] - Sulfolobus sp. (strain 7)%3B PIR:JC4919 gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0465 Ta0465 493313 493873 + probable intracellular proteinase I similarity to known protein: intracellular proteinase I (EC 3.4.-.-) - Pyrococcus furiosus%3B PIR:JC6003 gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0760 Ta0760 802651 803391 - dolichol-phosphate-mannosyltransferase related protein similarity to known protein: dolichyl phosphoryl mannose synthase - smut fungus (Ustilago maydis)%3B PIR:S71642Function: Biosynthesis and degradation of glycoprotein. gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1445 Ta1445 1493259 1493792 + hypothetical protein no similarity gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0973 Ta0973 1039064 1039837 + conserved hypothetical protein similarity to unknown protein: hypothetical protein aq_926 - Aquifex aeolicus%3B PIR:C70380 gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0016 Ta0016 14252 14818 - hypothetical protein weak similarity to known protein. Relation: weak similarity to PIR2:JC6531. gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1456 Ta1456 1502653 1503816 + probable 3-ketoacyl-CoA thiolase similarity to known protein: probable nonspecific lipid-transfer protein - Pyrococcus horikoshii%3B PIR:E71113Function: Fatty acid biosynthesis (path 2)%2C Fatty acid metabolism%2C Valine%2C leucine and isoleucine degradation%2C Phenylalanine metabolism. gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0697 Ta0697 738745 739137 - transposase related protein similarity to known protein: TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS905 - Lactococcus lactis (subsp. lactis) (Streptococcus lactis)%3B SWISSPROT:TRA5_LACLA gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0503 Ta0503 532626 534428 - conserved hypothetical membrane protein similarity to unknown protein: lysine/cadaverine antiporter membrane protein cadB - Escherichia coli%3B PIR:A41842ORF_prediction: This protein reveals a longer N-terminus as its relatives. It is not clearly suggested to start later by codon usage%2C freaquency of rare codons and alignments with related proteins.. gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0206 Ta0206 206723 208153 - glycyl-tRNA synthetase related similarity to known protein: GLYCYL-TRNA SYNTHETASE (EC 6.1.1.14) (GLYCINE--TRNA LIGASE) (GLYRS) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:SYG_ARATH gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1446 Ta1446 1493917 1495212 - trna nucleotidyltransferase related protein similarity to known protein: TRNA NUCLEOTIDYLTRANSFERASE (EC 2.7.7.25) (TRNA ADENYLYLTRANSFERASE)(TRNA CCA-PYROPHOSPHORYLASE) (CCA-ADDING ENZYME) - Sulfolobus shibatae%3B SWISSPROT:CCA_SULSH gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0642 Ta0642 675152 675898 + hypothetical membrane protein weak similarity to known protein gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0733 Ta0733 774410 775369 - ATP-binding protein related resistance protein similarity to known protein: spaF protein - Bacillus subtilis%3B PIR1:I40516. Relation: similarity to spaF protein - Bacillus subtilis%3B PIR1:I40516. gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1378 Ta1378 1423037 1424428 + conserved hypothetical protein similarity to unknown protein. Relation: weak similarity to Rattus norvegicus mRNA for LAT4%2C a Na+-independent neutral amino acid transporter%2C TREMBL:AB024400_1. gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0295 Ta0295 315202 316395 - acyl-CoA dehydrogenase (SHORT-CHAIN SPECIFIC) related protein similarity to known protein: ACYL-COA DEHYDROGENASE%2C SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum%3B SWISSPROT:ACDS_CLOAB gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0337 Ta0337 358126 358497 - hypothetical protein no similarity gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1493 Ta1493 1547073 1548971 + queuine tRNA-ribosyltransferase related protein similarity to known protein: QUEUINE TRNA-RIBOSYLTRANSFERASE (EC 2.4.2.29) (TRNA-GUANINETRANSGLYCOSYLASE) (GUANINE INSERTION ENZYME) - Zymomonas mobilis%3B SWISSPROT:TGT_ZYMMO gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0149 Ta0149 150054 151265 - conserved hypothetical protein similarity to unknown protein: multidrug resistance protein homolog yttB - Bacillus subtilis%3B PIR:F70001 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0101 Ta0101 96573 97025 - ZINC-FINGER PROTEIN ZPR1 related protein similarity to known protein: ZINC-FINGER PROTEIN ZPR1 - Schizosaccharomyces pombe (Fission yeast)%3B SWISSPROT:ZPR1_SCHPO gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0744 Ta0744 788130 788435 + conserved hypothetical protein similarity to unknown protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1035 Ta1035 1107344 1108354 - DNA repair protein RAD2 related protein similarity to known protein: DNA structure-specific endonuclease FEN1 [validated] - human%3B PIR:A56531 gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0017 Ta0017 15264 16157 - hypothetical membrane protein weak similarity to known protein. Relation: weak similarity to PIR2:S27868. gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term= 1398693 1398765 + tRNA-Thr Predicted Thr tRNA (Anticodon TGT) tRNA rna37 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1044 Ta1044 1115280 1115534 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF1941 - Archaeoglobus fulgidus%3B PIR:D69492 gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0091 Ta0091 88440 88868 + probable ribosomal protein S12 strong similarity to known protein: ribosomal protein S23.e%2C cytosolic - yeast (Saccharomyces cerevisiae)%3B PIR:A46703 gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term= 232278 232417 + tRNA-Trp Predicted Trp tRNA (Anticodon CCA) tRNA rna4 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0446 Ta0446 473199 475397 + translation elongation factor aEF-2 related protein similarity to known protein: translation elongation factor EF-G - Thermus aquaticus%3B PIR:EFTWG gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0906 Ta0906 975571 977187 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1949 - Pyrococcus horikoshii%3B PIR:E71210 gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0500 Ta0500 530156 531658 + probable benzoylformate decarboxylase similarity to known protein: BENZOYLFORMATE DECARBOXYLASE (EC 4.1.1.7) (BFD) (BFDC) - Pseudomonas putida%3B SWISSPROT:MDLC_PSEPUFunction: involved in phenylalanin metabolism. gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0190 Ta0190 191534 191887 + hypothetical protein no similarity gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0050 Ta0050 49626 50078 + ribosomal protein S19 related protein similarity to known protein: ribosomal protein S19%2C cytosolic [validated] - rat%3B PIR1:R3RT19 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0251 Ta0251 258090 258857 - 3-ketoacyl-acyl carrier protein reductase related protein similarity to known protein: Bacillus subtilis PlsX (plsX)%2C malonyl-CoA:Acyl carrier proteintransacylase (fabD) and 3-ketoacyl-acyl carrier protein reductase (fabG)genes%2C complete cds%2C and acyl carrier protein (acpP) gene%2C partial cds%3B TREMBL:BSU59433_3 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0800 Ta0800 854740 855042 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB1715 - Pyrococcus abyssi (strain Orsay)%3B PIR:E75074 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1398 Ta1398 1445702 1447297 - hypothetical protein weak similarity to known protein. Relation: weak similarity to polymerase - Berne virus%2C PIR2:S11238. gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0864 Ta0864 931266 931640 + small heat shock protein (hsp20) related protein similarity to known protein: Thermotoga maritima heat shock protein 70 (hsp70) and small heat shockprotein (shsp) genes%2C complete cds%3B TREMBL:AF106330_2 gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0618 Ta0618 649782 650603 - probable transketolase strong similarity to known protein: TRANSKETOLASE (EC 2.2.1.1) (TK) (P68) - Mus musculus (Mouse)%3B SWISSPROT:TKT_MOUSE gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0279 Ta0279 293715 295115 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF0862 - Archaeoglobus fulgidus%3B PIR:F69357 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0430 Ta0430 458549 458974 - hypothetical protein no similarity gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1401 Ta1401 1449933 1450574 - hypothetical protein weak similarity to known protein. Relation: weak similarity to dnaK-type molecular chaperone hsc70-3 - tomato%2C PIR2:JC4786. gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0535 Ta0535 564718 565617 + cysteine synthase related protein similarity to known protein: cysteine synthase (EC 4.2.99.8) B - Campylobacter jejuni%3B PIR:JC6185 gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0805 Ta0805 858303 858842 + hypothetical protein weak similarity to known protein. Relation: weak similarity to phosphoribosylanthranilate isomerase - Aquifex aeolicus%2C PIR:A70478. gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1208 Ta1208 1275761 1276573 - nitrilase related protein similarity to known protein: nitrilase/Fhit protein - Caenorhabditis elegans%3B PIR:T43198Function: Involved in cyanoamino acid metabolism and nitrogen metabolism. gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0103 Ta0103 98138 98875 - gamma-glutamyl kinase related protein similarity to known protein: S.thermophilus proB and proA genes%3B TREMBL:STPROBA_1 gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0684 Ta0684 721069 721809 + deoxyribose-phosphate aldolase related protein similarity to known protein: DEOXYRIBOSE-PHOSPHATE ALDOLASE (EC 4.1.2.4) (PHOSPHODEOXYRIBOALDOLASE)(DEOXYRIBOALDOLASE) - Mycoplasma hominis%3B SWISSPROT:DEOC_MYCHO gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1170 Ta1170 1243935 1244171 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF0556 - Archaeoglobus fulgidus%3B PIR:D69319 gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0729 Ta0729 772334 772900 - conserved hypothetical protein similarity to unknown protein: hypothetical protein yrdC - Bacillus subtilis%3B PIR:A69973. Relation: weak similarity to cloned N-carbamoylsarcosine- amidohydrolase - Arthrobacter sp.%3B TREMBL:A17978_1. gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0199 Ta0199 200704 201258 - probable TATA-box binding protein (TFIID homolog) strong similarity to known protein: TATA-BOX BINDING PROTEIN (TATA-BOX FACTOR) (TATA SEQUENCE-BINDINGPROTEIN) (TBP) - Thermococcus celer%3B SWISSPROT:TF2D_THECE gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0600 Ta0600 631359 631625 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH1407 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:D69054 gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0613 Ta0613 644431 645924 + conserved hypothetical protein similarity to unknown protein: mRNA 3'-end processing factor homolog - Archaeoglobus fulgidus%3B PIR:B69310 gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0930 Ta0930 999028 999534 + conserved hypothetical protein similarity to unknown protein: hypothetical protein AF0421 - Archaeoglobus fulgidus%3B PIR:E69302 gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0470 Ta0470 499086 502142 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein - Deinococcus radiodurans (strain R1)%3B PIR:A75560 gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0567 Ta0567 597762 597929 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein AF0573 - Archaeoglobus fulgidus%3B PIR:E69321 gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1137 Ta1137 1209213 1209587 + probable Gim%2C beta subunit similarity to known protein: probable erpK protein - Archaeoglobus fulgidus%3B PIR:E69393 gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1002 Ta1002 1074552 1075274 + probable fumarate reductase%2C subunit B strong similarity to known protein: FUMARATE REDUCTASE IRON-SULFUR PROTEIN (EC 1.3.99.1) - Proteus vulgaris%3B SWISSPROT:FRDB_PROVU gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0489 Ta0489 520456 521151 - hypothetical protein no similarity gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0082 Ta0082 81342 81953 + probable phosphoribosylglycinamide formyltransferase strong similarity to known protein: phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) - Arabidopsis thaliana%3B PIR:S37105 gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1128 Ta1128 1196592 1197266 + conserved hypothetical protein similarity to unknown protein: hypothetical protein APE1534 - Aeropyrum pernix (strain K1)%3B PIR:G72634 gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0757 Ta0757 800141 800494 + hypothetical membrane protein no similarity gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1082 Ta1082 1155128 1155484 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB1376 - Pyrococcus abyssi (strain Orsay)%3B PIR:E75063 gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0611 Ta0611 642892 643329 - inosine-5'-monophosphate dehydrogenase related protein similarity to known protein: PUTATIVE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE (EC 1.1.1.205) (IMPDEHYDROGENASE) (IMPDH) (IMPD) (ORFX) (FRAGMENT) - Methanopyrus kandleri%3B SWISSPROT:IMDH_METKA gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0235 Ta0235 242508 243656 - conserved hypothetical protein similarity to unknown protein: probable amiB protein - Mycobacterium tuberculosis (strain H37RV)%3B PIR:A70842. Relation: weak similarity to thermostable carboxypeptidase%2C sulfolobus solfataricus%2C SWISSPROT:CBPX_SULSO. gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0787 Ta0787 832259 835681 - chromosome segregation protein related ptotein similarity to known protein: chromosome segregation protein (smc1) homolog - Archaeoglobus fulgidus%3B PIR:E69444 gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0577 Ta0577 607099 608382 + sarcosine oxidase related protein weak similarity to known proteinFunction: Glycine%2C serine and threonine metabolism. gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0145 Ta0145 143431 144273 + trehalose/maltose transporter%2C inner membrane protein MalF related protein similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes%2C complete cds%3B TREMBL:AF012836_2 gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0507 Ta0507 537396 538070 - conserved hypothetical protein similarity to unknown protein: hypothetical protein APE0237 - Aeropyrum pernix (strain K1)%3B PIR:D72781 gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0085 Ta0085 83173 84333 - conserved hypothetical protein similarity to unknown protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1331 Ta1331 1380221 1381105 - probable succinyl-CoA synthetase%2C alpha subunit strong similarity to known protein: Thermus aquaticus succinyl-CoA synthetase alpha-subunit (sucD) gene%2C complete cds%3B TREMBL:TASUCD01_1 gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0521 Ta0521 550668 551183 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein APE0247 - Aeropyrum pernix (strain K1)%3B PIR:F72782ORF_prediction: This ORF convergently overlaps with the one coding for the neighboring pyridoxine biosynthesis pyroA protein related protein. We have kept this ORF next to the pyroA related one%2C as both show a convincingly good codon usage and low frequency of rare codons%2C and are similar to proteins in other organisms.. gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0818 Ta0818 874364 876055 - hypothetical protein weak similarity to known protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1132 Ta1132 1199719 1200204 + hypothetical protein similarity to unknown protein: hypothetical protein PH0059 - Pyrococcus horikoshii%3B PIR:H71224 gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1121 Ta1121 1189685 1190278 + cob(I)alamin adenosyltransferase related protein similarity to known protein: COB(I)ALAMIN ADENOSYLTRANSFERASE (EC 2.5.1.17) (CORRINOIDADENOSYLTRANSFERASE) - Pseudomonas denitrificans%3B SWISSPROT:COBO_PSEDE gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1417 Ta1417 1465742 1466683 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH724 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:G69196 gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1145 Ta1145 1216828 1218006 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1868 - Pyrococcus horikoshii%3B PIR:G71199 gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0942 Ta0942 1010940 1012592 + glutamyl-tRNA synthetase related protein similarity to known protein: multifunctional aminoacyl-tRNA ligase - human%3B PIR:SYHUQT gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0384 Ta0384 409176 409895 + hypothetical membrane protein no similarity gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0686 Ta0686 723052 724779 - hypothetical protein weak similarity to known protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0064 Ta0064 62052 62411 - acylphosphatase Ch2 related protein similarity to known protein: acylphosphatase (EC 3.6.1.7) Ch2%2C skeletal muscle - chicken%3B PIR:QPCH2Function: Glycolysis / Gluconeogenesis%2C Phenylalanine metabolism%2C Pyruvate metabolism. gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0138 Ta0138 134353 136203 + neopullulanase related protein similarity to known protein: neopullulanase (EC 3.2.1.135) - Bacillus sp.%3B PIR:JS0673 gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1234 Ta1234 1299455 1300582 - hypothetical membrane protein no similarity gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1464 Ta1464 1510842 1512611 + chloride channel (CLC-3) related protein similarity to known protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1436 Ta1436 1485462 1486664 - probable lipoamide acyltransferase strong similarity to known protein: Myxococcus xanthus lipoic acid synthetase precursor%2C lipoamideacyltransferase%2C and lipoate-protein ligase B genes%2C complete cds%3B andunknown genes%3B TREMBL:AF153678_2 gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0823 Ta0823 881255 881827 + hypothetical protein weak similarity to known protein gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0743 Ta0743 787671 788039 - hypothetical protein no similarity gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0780 Ta0780 823411 824904 + benzoylformate decarboxylase related proten similarity to known protein: BENZOYLFORMATE DECARBOXYLASE (EC 4.1.1.7) (BFD) (BFDC) - Pseudomonas putida%3B SWISSPROT:MDLC_PSEPUFunction: Aromatic hydrocarbons catabolism%3B Mandelate pathway. gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1020 Ta1020 1090432 1091118 + transcription initiation factor IIB related protein similarity to known protein: TRANSCRIPTION INITIATION FACTOR IIB HOMOLOG (TFIIB) - Pyrococcus furiosus%3B SWISSPROT:TF2B_PYRFU gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0037 Ta0037 34261 35040 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF2209 - Archaeoglobus fulgidus%3B PIR:A69526 gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0200 Ta0200 201320 201622 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0311 - Pyrococcus horikoshii%3B PIR:A71457 gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0505 Ta0505 534934 536004 + hypothetical protein no similarity gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0753 Ta0753 796628 797620 - mannonate dehydratase related protein similarity to known protein: MANNONATE DEHYDRATASE (EC 4.2.1.8) (D-MANNONATE HYDROLASE) - Thermotoga neapolitana%3B SWISSPROT:UXUA_THENEFunction: Pentose and glucuronate interconversions. gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0972 Ta0972 1037793 1039022 - L-asparaginase related protein similarity to known protein: asparaginase (EC 3.5.1.1) I - Escherichia coli%3B PIR:XDEC1 gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0933 Ta0933 1001399 1002487 + multidrug resistance protein NorA related protein similarity to known protein: norA%3DNorA {ISP794} [Staphylococcus aureus%2C NCTC 8325%2C Insertion%2C 1820 nt]%3B TREMBL:S74031_1 gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1412 Ta1412 1462805 1463188 - hypothetical protein no similarity gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0752 Ta0752 795429 796544 - starvation-sensing protein rspA related protein similarity to known protein: hypothetical protein b2247 - Escherichia coli (strain K-12)%3B PIR:E64995 gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0847 Ta0847 912902 913252 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MJ1052 - Methanococcus jannaschii%3B PIR:C64431 gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0398 Ta0398 424216 425403 - ACYL-COA DEHYDROGENASE%2C SHORT-CHAIN SPECIFIC%2C related protein similarity to known protein: ACYL-COA DEHYDROGENASE%2C SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum%3B SWISSPROT:ACDS_CLOABFunction: Fatty acid metabolism%2C Valine%2C leucine and isoleucine degradation%2C beta-Alanine metabolism%2C Propanoate metabolism. gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0078 Ta0078 77248 78273 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0276 - Archaeoglobus fulgidus%3B PIR:D69284 gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0360 Ta0360 379702 380355 - probable 50S ribosomal protein L1 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L1P (HL8) - Halobacterium cutirubrum%3B SWISSPROT:RL1_HALCU gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1281 Ta1281 1335407 1336198 - probable phosphomethylpyrimidine kinase strong similarity to known protein: PHOSPHOMETHYLPYRIMIDINE KINASE (EC 2.7.4.7) (HMP-PHOSPHATE KINASE)(HMP-P KINASE).PHOSPHOMETHYLPYRIMIDINE KINASE (EC 2.7.4.7) (HMP-PHOSPHATE KINASE)(HMP-P KINASE) - Salmonella typhimurium.Salmonella typhimurium%3B SWISSPROT:THID_SALTY gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1267 Ta1267 1320629 1321084 - probable 30S ribosomal protein S19 strong similarity to known protein: 30S RIBOSOMAL PROTEIN S19 (HHAS19) - Halobacterium halobium%3B SWISSPROT:RS19_HALHA gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0826 Ta0826 885307 886836 - hypothetical protein no similarity gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0497 Ta0497 527427 528455 + hypothetical membrane protein no similarity gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term= 341210 341284 + tRNA-Ile Predicted Ile tRNA (Anticodon GAT) tRNA rna6 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0362 Ta0362 380999 382015 - hypothetical protein no similarity gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term= 1008253 1008337 + tRNA-Leu Predicted Leu tRNA (Anticodon CAA) tRNA rna22 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1051 Ta1051 1121971 1122771 - ABC transporter permease related protein similarity to known protein: sulfate/thiosulfate transport protein cysT - Escherichia coli%3B PIR:QRECST gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0635 Ta0635 665521 666831 + probable glutamate dehydrogenase strong similarity to known protein: GLUTAMATE DEHYDROGENASE (EC 1.4.1.3) (GDH) - Thermococcus litoralis%3B SWISSPROT:DHE3_THELIFunction: generally involved with either ammonia assimilation or glutamate catabolism. ORF_prediction: N-terminus longer than those of trelated proteins%2C however its codon usage does support a coding function of the first 40 aa%2C the frequency of rare codons is very low%2C possible second start only after 35 aa%2C not altered. gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0516 Ta0516 545888 547057 - geranylgeranyl reductase related protein similarity to known protein: Nicotiana tabacum mRNA for geranylgeranyl reductase%3B TREMBL:NTO7789_1Function: involved in prenyllipid biosynthesis. gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0895 Ta0895 963644 963916 + conserved hypothetical protein similarity to unknown protein: molybdopterin converting factor related%2C chain 1 PAB3241 - Pyrococcus abyssi (strain Orsay)%3B PIR:C75071 gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1298 Ta1298 1347384 1347701 + hypothetical protein weak similarity to unknown protein gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1058 Ta1058 1130212 1131123 - agmatinase related protein similarity to known protein: agmatinase (EC 3.5.3.11) [validated] - Escherichia coli%3B PIR:C42604Function: Arginine and proline metabolism. gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0299 Ta0299 321441 321701 + hypothetical membrane protein no similarity gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0283 Ta0283 300998 301804 - conserved hypothetical protein similarity to unknown protein: homoserine kinase PAB0301 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75161 gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1505 Ta1505 1559634 1560236 + rusticyanin related protein similarity to known protein: rusticyanin - Thiobacillus ferrooxidans%3B PIR:CUBCRT gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0104 Ta0104 98872 99645 - SPERMIDINE N1-ACETYLTRANSFERASE related protein similarity to known protein: SPERMIDINE N1-ACETYLTRANSFERASE (EC 2.3.1.57) (DIAMINEACETYLTRANSFERASE) (SAT) - Escherichia coli%3B SWISSPROT:ATDA_ECOLI gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1042 Ta1042 1112584 1113285 - conserved hypothetical protein weak similarity to unknown protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1071 Ta1071 1144439 1145164 - conserved hypothetical membrane protein similarity to unknown protein: probable ABC transporter%2C ATP-binding protein PAB2071 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75157 gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1275 Ta1275 1327717 1328655 - putative target YPL207w of the HAP2 transcriptional complex related protein similarity to known protein: probable membrane protein YPL207w - yeast (Saccharomyces cerevisiae)%3B PIR2:S65226. Relation: YPL207w identified by EUROFAN I systematic functional analysis project as putative HAP2 target (http://www.mips.biochem.mpg.de/proj/eurofan/eur fan_1/b4/). gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0759 Ta0759 802279 802632 + hypothetical protein no similarity gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1491 Ta1491 1544841 1545290 + hypothetical protein strong similarity to unknown protein: hypothetical 17.7K protein - Thermoplasma acidophilum%3B PIR:T43256 gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1212 Ta1212 1280566 1281588 - translation initiation factor aIF-2B%2C alpha chain related protein similarity to known protein: TRANSLATION INITIATION FACTOR EIF-2B ALPHA SUBUNIT (EIF-2B GDP-GTPEXCHANGE FACTOR) - Homo sapiens (Human)%3B SWISSPROT:E2BA_HUMAN gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0322 Ta0322 342319 343554 - probable translation initiation factor aIF-2%2C gamma chain strong similarity to known protein: Mus musculus mRNA for translation initiation factor eIF2 gamma Y%3B TREMBL:MMU6584_1 gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0889 Ta0889 956551 957735 - DNA/pantothenate metabolism flavoprotein related protein similarity to known protein: Bradyrhizobium japonicum UbiE (ubiE) gene%2C partial cds%3B AarF (aarF)%2C panthotenate metabolism flavoprotein (dfp)%2C deoxyuridine-triphosphatase(dut)%2C putative sensor protein (bdfA)%2C GalF-like (galF)%2C hypotheticalprotein genes%2C complete cds%3B putative helicase 2 gene%2C partial cds%3B andunknown genes%3B TREMBL:AF042096_2 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0066 Ta0066 64078 64860 - gliding motility protein (gldA) related protein similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene%2C completecds%3B and unknown genes%3B TREMBL:AF007381_3 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0687 Ta0687 724776 726731 - conserved hypothetical protein weak similarity to unknown protein gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0671 Ta0671 706417 707736 + hypothetical protein no similarity. Relation: weak similarity to amino acid transporter homolog ybeC - Bacillus subtilis%2C PIR:D69748. gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0170 Ta0170 174571 175878 + probable arsenical pump membrane protein strong similarity to known protein: arsenical pump membrane protein - Staphylococcus xylosus%3B PIR:B41902 gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1431 Ta1431 1480827 1481489 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MJ1634 - Methanococcus jannaschii%3B PIR:H64503 gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0277 Ta0277 291967 292506 - hypothetical protein weak similarity to known protein. Relation: weak similarity to diamine N-acetyltransferase (EC 2.3.1.57) - Escherichia coli%2C PIR2:A55345. gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term= 423418 423492 + tRNA-Met Predicted Met tRNA (Anticodon CAT) tRNA rna10 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0522 Ta0522 550538 551548 - probable pyridoxine biosynthesis pyroA protein strong similarity to known protein: Emericella nidulans PYROA (pyroA) gene%2C complete cds%3B TREMBL:AF133101_1 gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1370 Ta1370 1416631 1416978 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:C72206 gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1504 Ta1504 1559233 1559637 + hypothetical protein no similarity gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0155 Ta0155 155684 156052 + conserved hypothetical protein similarity to unknown protein: hypothetical protein AF0782 - Archaeoglobus fulgidus%3B PIR:F69347 gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0247 Ta0247 253843 254700 + probable gene for 32.4kD protein (ccmA%2C required for carboxysome formation) strong similarity to known protein: Synechocystis sp. ccmA gene for 32.4kD protein and ORF271 for 29.5kDprotein%2C complete cds%3B TREMBL:SSCCMA_1 gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0368 Ta0368 388210 388854 + hypothetical protein no similarity gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0309 Ta0309 331289 332233 + phosphoribosylamidoimidazole-succinocarboxamide synthase related protein similarity to known protein: PHOSPHORIBOSYLAMIDOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE (EC 6.3.2.6)(SAICAR SYNTHETASE) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:PUR7_YEAST gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0375 Ta0375 397452 397916 - protease synthase and sporulation negative regulatory protein (paiA) related similarity to known protein: PROTEASE SYNTHASE AND SPORULATION NEGATIVE REGULATORY PROTEIN PAI 1 - Bacillus subtilis%3B SWISSPROT:PAIA_BACSU gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0617 Ta0617 648835 649785 - probable transketolase strong similarity to known protein: TRANSKETOLASE (EC 2.2.1.1) (TK) (P68) - Mus musculus (Mouse)%3B SWISSPROT:TKT_MOUSE gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0602 Ta0602 632363 634345 + conserved hypothetical membrane protein no similarity. Relation: weak similarity to probable membrane protein YOL075c - yeast (Saccharomyces cerevisiae)%2C PIR:S77690. gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0841 Ta0841 908837 909847 + alcohol dehydrogenase related protein similarity to known protein: alcohol dehydrogenase (EC 1.1.1.1) - Bacillus stearothermophilus (strain DSM 2334)%3B PIR:S47643 gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0079 Ta0079 78316 79359 - dihydropteroate synthase related protein similarity to known protein: dihydropteroate synthase (EC 2.5.1.15) - Neisseria meningitidis (strain BT054)%3B PIR:S65837ORF_prediction: This ORF has an N-terminal extension compared to related dihydropteroate synthase or about 80 amino acids. Neither codon usage nor frequency of rare codons suggest a later start of the ORF.. gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1061 Ta1061 1132653 1133429 + hypothetical protein weak similarity to unknown protein gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0211 Ta0211 212736 213362 + FIXA (related to carnitine metabolism) related protein similarity to known protein: FIXA PROTEIN.FIXA PROTEIN - Escherichia coli.Escherichia coli%3B SWISSPROT:FIXA_ECOLI gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term= 1556308 1556379 + tRNA-Ala Predicted Ala tRNA (Anticodon CGC) tRNA rna47 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0859 Ta0859 924231 925037 + hypothetical protein no similarity gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0558 Ta0558 586208 586879 + hypothetical protein similarity to unknown protein: hypothetical protein MJ0899 - Methanococcus jannaschii%3B PIR:C64412 gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0029 Ta0029 26048 26896 + hypothetical protein no similarity gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0707 Ta0707 749530 750684 - conserved hypothetical protein weak similarity to unknown protein gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1371 Ta1371 1417172 1418128 + conserved hypothetical protein similarity to unknown protein: C4-dicarboxylate transporter (mae1) homolog - Archaeoglobus fulgidus%3B PIR:C69293. Relation: weak similarity to dicarboxylate transport protein mae1 - fission yeast%2C PIR:S61876. gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0799 Ta0799 852647 854743 + DNA replication licensing factor MCM related protein similarity to known protein: CDC21 PROTEIN.CDC21 PROTEIN - Schizosaccharomyces pombe (Fission yeast).Schizosaccharomyces pombe (Fission yeast)%3B SWISSPROT:CC21_SCHPO gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0370 Ta0370 389390 389791 - hypothetical protein no similarity gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0769 Ta0769 809631 811430 + probable acetyl-coenzyme A synthetase strong similarity to known protein: acetate--CoA ligase (EC 6.2.1.1) [validated] - Methanothrix soehngenii%3B PIR:A41043 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0845 Ta0845 911584 912210 + hypothetical protein weak similarity to unknown protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0024 Ta0024 20946 22379 - hypothetical protein weak similarity to known protein. Relation: weak similarity to TREMBL:MMMIB_1. gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1233 Ta1233 1298661 1299434 - hypothetical protein weak similarity to unknown protein gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0049 Ta0049 48715 49413 - hypothetical membrane protein no similarity gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0179 Ta0179 182132 182725 + conserved hypothetical protein similarity to unknown protein: adenylate kinase related protein PAB1725 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75072 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0157 Ta0157 157528 160218 - myosin heavy chain (mhcA) related protein similarity to known protein: Entamoeba histolytica myosin heavy chain (mhcA) gene%2C complete cds%3B TREMBL:EHMHCAX_1 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1496 Ta1496 1551280 1551747 + hypothetical protein no similarityFunction: transcription regulator. gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0622 Ta0622 654342 655160 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MTH872 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:E69216 gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0888 Ta0888 955783 956433 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0115 - Archaeoglobus fulgidus%3B PIR:C69264 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1440 Ta1440 1489751 1490383 - hypothetical protein no similarity gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1216 Ta1216 1284827 1286683 + conserved hypothetical protein similarity to unknown protein: hypothetical protein 1025 - Sulfolobus sp. plasmid pNOB8%3B PIR:T31014 gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1046 Ta1046 1118212 1118595 + probable chaperone (csaA) strong similarity to known protein: protein secretion chaperonin csaA [accepted] - Bacillus subtilis%3B PIR:E69607 gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1075 Ta1075 1148184 1149410 + probable 3-phosphoglycerate kinase strong similarity to known protein: phosphoglycerate kinase (EC 2.7.2.3) [validated] - Methanothermus fervidus (fragment)%3B PIR:PN0008 gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0591 Ta0591 622945 624777 - conserved hypothetical membrane protein weak similarity to unknown protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0566 Ta0566 597490 597765 - conserved hypothetical protein weak similarity to unknown protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1481 Ta1481 1532923 1533519 - hypothetical protein no similarity gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0680 Ta0680 717207 717632 + conserved hypothetical protein similarity to unknown protein: hypothetical protein APE0148 - Aeropyrum pernix (strain K1)%3B PIR:A72770 gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0848 Ta0848 913367 913792 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:E72365 gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0306 Ta0306 328021 328869 - hypothetical membrane protein no similarity gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0907 Ta0907 977487 979877 - DNA polymerase (PolB)%2C large chain related protein similarity to known protein: Pyrococcus sp. Deep Vent DNA polymerase precursor gene%2C complete cds%3B TREMBL:P707_2ORF_prediction: This ORF does not include an intein%2C as e.g. the related DNA-dependent DNA polymerase precursor from Thermococcus litoralis.. gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0300 Ta0300 321734 323221 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein c0207 - Sulfolobus solfataricus%3B PIR:S74025 gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1442 Ta1442 1491462 1491665 + hypothetical protein no similarity gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1172 Ta1172 1244837 1245421 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:D72242 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0944 Ta0944 1013071 1013616 - GMP synthase related protein similarity to known protein: GMP synthase (glutamine-hydrolyzing) (EC 6.3.5.2) [validated] - yeast (Saccharomyces cerevisiae)%3B PIR:S55099 gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term= 986244 986328 + tRNA-Leu Predicted Leu tRNA (Anticodon TAA) tRNA rna20 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0838 Ta0838 901492 904176 + Large helicase related protein similarity to known protein: Pyrococcus furiosus genes for helicase and carbamate kinase-likecarbamoylphosphate synthetase%2C complete cds%3B TREMBL:AB016521_2 gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0501 Ta0501 531679 532164 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein aq_134 - Aquifex aeolicus%3B PIR:H70312 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1261 Ta1261 1318082 1318480 - probable 50S ribosomal protein L14 strong similarity to known protein: ribosomal protein L14 [similarity] - Haloarcula marismortui%3B PIR1:R5HS14 gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1143 Ta1143 1214217 1216235 - heavy-metal transporting P-type ATPase related protein similarity to known protein: copper-transporting ATPase (EC 3.6.1.-) copA - Enterococcus hirae%3B PIR:A45995 gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0814 Ta0814 868417 869709 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0849 - Pyrococcus horikoshii%3B PIR:E71135 gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0222 Ta0222 225625 227091 + DNA polymerase II (PolB)%2C small chain related protein similarity to known protein: Pyrococcus furiosus gene for DNA polymerase II subunit 1%2C DNA polymerase IIsubunit 2%2C complete cds%3B TREMBL:D84670_2 gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1350 Ta1350 1400119 1401138 + probable carbamate kinase strong similarity to known protein: CARBAMATE KINASE (EC 2.7.2.2) - Clostridium perfringens%3B SWISSPROT:ARCC_CLOPEFunction: amino acid fermantation. gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0777 Ta0777 819044 821776 - leucyl-tRNA synthetase related protein similarity to known protein: leucyl-tRNA synthetase (leuS) homolog - Archaeoglobus fulgidus%3B PIR:F69552 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0032 Ta0032 28596 29051 - hypothetical protein no similarity gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0225 Ta0225 229766 230683 + gliding motility protein related similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene%2C completecds%3B and unknown genes%3B TREMBL:AF007381_3 gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1429 Ta1429 1477468 1478967 - conserved hypothetical protein similarity to unknown protein: hypothetical protein CT632 - Chlamydia trachomatis (serotype D%2C strain UW3/Cx)%3B PIR:D71489 gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1502 Ta1502 1558005 1558322 + hypothetical protein weak similarity to known protein. Relation: strong similarity to a small region of TREMBL:SLGROEL2G_1 (477 aa). gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0605 Ta0605 637636 638265 - translation initiation factor eIF-2%2C beta chain related protein similarity to known protein: translation initiation factor eIF-2 beta chain - yeast (Saccharomyces cerevisiae)%3B PIR:S29368 gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0768 Ta0768 809139 809543 - hypothetical protein no similarity gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1379 Ta1379 1424483 1425913 - phosphate transporter related protein similarity to known protein: phosphate transport protein PT1 - potato%3B PIR:T07604 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0660 Ta0660 692293 694002 + hypothetical protein weak similarity to known protein. Relation: weak simmilarity to uroporphyrin-III C-methyltransferase (EC 2.1.1.107) - maize%2C PIR:T03269. gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0714 Ta0714 758591 759382 + hypothetical protein weak similarity to unknown protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0139 Ta0139 136266 137105 + pyrroline-5-carboxylate reductase related protein similarity to known protein: pyrroline-5-carboxylate reductase (EC 1.5.1.2) - soybean%3B PIR:S10186 gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1195 Ta1195 1265693 1266568 - conserved hypothetical membrane protein similarity to unknown protein: na+/ca+ exchanging protein related PAB1029 - Pyrococcus abyssi (strain Orsay)%3B PIR:C75003 gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0552 Ta0552 582829 583347 - conserved hypothetical protein strong similarity to unknown protein: ferripyochelin binding protein PAB0393 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75176 gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0250 Ta0250 256973 257941 - glucose-fructose oxidoreductase related protein similarity to known protein: Z.mobilis gfo gene%3B TREMBL:ZMGFO_1 gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term= 1327579 1327651 + tRNA-Gln Predicted Gln tRNA (Anticodon CTG) tRNA rna33 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0761 Ta0761 803520 804134 + hypothetical protein weak similarity to known proteinFunction: Ubiquinone biosynthesis. gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0112 Ta0112 104603 107212 + probable aconitate hydratase strong similarity to known protein: aconitate hydratase (EC 4.2.1.3) - Legionella pneumophila%3B PIR:B48642 gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1129 Ta1129 1197528 1198751 + sulfide-quinone reductase related protein similarity to known protein: Rhodobacter capsulatus Rbsc-2 and sqr genes%2C ORF2 and ORF4 DNA%3B TREMBL:RCSQR_3Function: Deletion and interruption strains of Rhodobacter capsulatus document that sulfide-quinone reductase is essential for photoautotrophic growth on sulfide. The sulfide-oxidizing enzyme is involved in energy conversion%2C not in detoxification.. gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0716 Ta0716 759801 760061 - conserved hypothetical protein similarity to unknown protein gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0540 Ta0540 568785 569687 - heterodisulfide reductase related protein similarity to known protein: heterodisulfide reductase (EC 1.-.-.-) chain D - Archaeoglobus fulgidus%3B PIR:A69351 gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1001 Ta1001 1072839 1074542 + probable fumarate reductase (frdA) strong similarity to known protein: S.acidocaldarius sdhA%2C sdhB%2C sdhC and sdhD genes%3B TREMBL:SASDHABCD_2 gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1150 Ta1150 1222409 1222750 + hypothetical protein weak similarity to known protein gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1313 Ta1313 1361264 1362328 + geranylgeranyl pyrophosphate synthase related protein similarity to known protein: probable idsA2 protein - Mycobacterium tuberculosis (strain H37RV)%3B PIR:G70935 gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1327 Ta1327 1375220 1376176 - oligopeptide transport system%2C permease protein appC related protein similarity to known protein: probable oligopeptide transport system permease protein AppC - Pyrococcus horikoshii%3B PIR:C71163. Relation: similarity to probable oligopeptide transport system permease protein AppC - Pyrococcus horikoshii%2C PIR:C71163. gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1400 Ta1400 1449542 1449922 - hypothetical protein no similarity gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term= 1240260 1240346 + tRNA-Met Predicted Met tRNA (Anticodon CAT) tRNA rna30 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0984 Ta0984 1052825 1053784 + probable thioredoxin reductase strong similarity to known protein: THIOREDOXIN REDUCTASE (EC 1.6.4.5) (TRXR) - Listeria monocytogenes%3B SWISSPROT:TRXB_LISMO gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0698 Ta0698 739292 739660 + hypothetical protein no similarity gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0201 Ta0201 201635 202282 - conserved hypothetical protein similarity to unknown protein: hypothetical protein - Synechocystis sp. (strain PCC 6803)%3B PIR:S76597 gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term= 1529328 1532372 + 23S rRNA gene (3' end +/- 5 bp) rRNA rna45 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1288 Ta1288 1341851 1342552 + proteasome alpha subunit known protein: multicatalytic endopeptidase complex (EC 3.4.99.46) alpha chain - Thermoplasma acidophilum%3B PIR:S55350 gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0268 Ta0268 276690 277685 + ABC-transporter (orf B) related protein similarity to known protein: M.mazei orfA%2C orfB%2C and orfC of archaeal ABC-transporter system%3B TREMBL:MMABCTRAN_2 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0102 Ta0102 97095 98141 - conserved hypothetical protein strong similarity to unknown protein: carotenoid biosynthetic protein ERWCRTS homolog - Archaeoglobus fulgidus%3B PIR:G69535 gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0530 Ta0530 559401 560333 + homoserine kinase related protein similarity to known protein: Arabidopsis thaliana homoserine kinase (HSK) mRNA%2C complete cds%3B TREMBL:AF082525_1 gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0098 Ta0098 93479 94960 + conserved hypothetical protein strong similarity to unknown protein: endopeptidase La-related protein - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:C69219 gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1026 Ta1026 1098124 1098852 - hypothetical membrane protein no similarity gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0272 Ta0272 283293 287243 + hypothetical membrane protein no similarity gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1403 Ta1403 1452618 1454921 - thermopsin precursor related protein similarity to known protein: thermopsin (EC 3.4.99.43) precursor - Sulfolobus acidocaldarius%3B PIR:A35009 gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0258 Ta0258 265164 266537 - probable fumarase strong similarity to known protein: Bacillus subtilis 42.7kB DNA fragment from yvsA to yvqA%3B TREMBLNEW:BS43KBDNA_39 gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0715 Ta0715 759358 759798 + hypothetical protein weak similarity to unknown protein. Relation: shows weak similarities to proteins%2C characterized by the analysis of gene clusters%2C which are thought to be mannosyl- or galactosyl transferases and involved in lipopolysaccharaide biosynthesis. gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0241 Ta0241 249596 250030 + hypothetical protein weak similarity to unknown protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0681 Ta0681 717668 718789 - conserved hypothetical protein weak similarity to known protein. Relation: weak similarity to C-terminus of lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme Arabidopsis thaliana%3B ATU95759_1. gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1469 Ta1469 1516752 1518020 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical transmembrane protein AF2309 - Archaeoglobus fulgidus%3B PIR:E69538 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0165 Ta0165 168451 168711 - hypothetical protein no similarity gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0422 Ta0422 448807 449304 + hypothetical protein no similarity gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0724 Ta0724 768223 769548 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0691 - Pyrococcus horikoshii%3B PIR:D71115 gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0269 Ta0269 277658 279808 + ABC-transporter (orf C) related protein similarity to known protein: M.mazei orfA%2C orfB%2C and orfC of archaeal ABC-transporter system%3B TREMBL:MMABCTRAN_3 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0313 Ta0313 334841 335491 + triosephosphate isomerase related protein similarity to known protein: TRIOSEPHOSPHATE ISOMERASE (EC 5.3.1.1) (TIM) - Giardia lamblia (Giardia intestinalis)%3B SWISSPROT:TPI1_GIALA gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0400 Ta0400 426040 426372 + hypothetical protein no similarity gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0941 Ta0941 1009979 1010959 + GTP-binding protein related protein%2C GTP1/OBG-family similarity to known protein: Homo sapiens GTP-binding protein NGB mRNA%2C complete cds%3B TREMBL:AF120334_1 gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0144 Ta0144 141996 143405 + hypothetical protein weak similarity to known protein. Relation: weak similarity to GLYCEROL-3-PHOSPHATE-BINDING PERIPLASMIC PROTEIN PRECURSOR%2C Escherichia coli%2C SWISSPROT:UGPB_ECOLI. gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1077 Ta1077 1149813 1150679 + probable signal recognition particle protein strong similarity to known protein: cell division protein ftsY - Escherichia coli%3B PIR:CEECFYORF_prediction: Compared to similar signal recognition particle related protein%2C this ORF is shorter at its N-terminus. The start codon used is the left most one gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0607 Ta0607 638993 639598 + hypothetical protein weak similarity to known protein. Relation: similarity to SWISSPROT:FTSZ_BRELA is weak. gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1385 Ta1385 1429670 1431520 - hypothetical protein weak similarity to known protein. Relation: weak similarity to peptide-n4-(n-acetyl-beta-d-glucosaminyl) asparaginase amidase n%2C aspergillus niger%2C TREMBL:U96923_1. gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0131 Ta0131 128824 129174 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE2517 - Aeropyrum pernix (strain K1)%3B PIR:E72484Function: probable transcription regulator. gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0867 Ta0867 933628 933945 - hypothetical protein no similarity gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0113 Ta0113 107351 108571 + probable threonine dehydratase%2C biodegradative strong similarity to known protein: threonine dehydratase (EC 4.2.1.16)%2C biodegradative [validated] - Escherichia coli%3B PIR:DWECTD gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0476 Ta0476 506033 506908 + probable 3-hydroxyacyl-CoA dehydrogenase strong similarity to known protein: Sus scrofa L-3-hydroxyacyl-CoA dehydrogenase precursor (HAD) mRNA%2C nucleargene encoding mitochondrial protein%2C complete cds%3B TREMBL:AF027652_1Function: Fatty acid biosynthesis (path 2)%2C Fatty acid metabolism%2C Valine%2C leucine and isoleucine degradation%2C Lysine degradation%2C Tryptophan metabolism%2C Butanoate metabolism. gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0074 Ta0074 72499 73191 + protease (pspA) related protein similarity to known protein: Campylobacter jejuni protease (pspA) gene%2C complete cds%3B TREMBL:CJU38524_1 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1485 Ta1485 1537179 1537796 + hypothetical protein weak similarity to unknown protein. Relation: weak similarity to TenA von B. subtilis. gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term= 237339 237411 + tRNA-Val Predicted Val tRNA (Anticodon TAC) tRNA rna5 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0988 Ta0988 1057234 1058241 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1972 - Archaeoglobus fulgidus%3B PIR:C69496 gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1093 Ta1093 1163968 1164135 + probable 30S ribosomal protein S27A strong similarity to known protein: ribosomal protein S27a.eR [similarity] - Haloarcula marismortui%3B PIR:S27036 gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0899 Ta0899 968169 968894 + NAD(+) synthase related protein similarity to known protein: NAD+ synthase (EC 6.3.1.5) [validated] - Bacillus subtilis%3B PIR:A26936Function: Nicotinate and nicotinamide metabolism. gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1397 Ta1397 1444460 1445671 - hypothetical protein no similarity gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1348 Ta1348 1397642 1398397 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Deinococcus radiodurans (strain R1)%3B PIR:G75440. Relation: weak smilarity to embryonic abundant protein EMB34 - white spruce%2C PIR:T09281. gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0449 Ta0449 476686 476934 + hypothetical protein no similarity gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1010 Ta1010 1079756 1080631 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein HI0380 homolog - Methanococcus jannaschii%3B PIR:C64484 gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1299 Ta1299 1347715 1348263 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1822 - Pyrococcus horikoshii%3B PIR:F71193 gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term= 15028 15112 + tRNA-Leu Predicted Leu tRNA (Anticodon GAG) tRNA rna0 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0868 Ta0868 934364 934741 + conserved hypothetical protein similarity to unknown protein: hypothetical protein c0114 - Sulfolobus solfataricus%3B PIR:S78039 gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0693 Ta0693 734096 734875 + conserved hypothetical protein similarity to unknown protein: UDPglucose 4-epimerase (EC 5.1.3.2) - Methanococcus jannaschii%3B PIR:D64326 gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1339 Ta1339 1389132 1389614 + cell-cycle regulation histidine triad (HIT) related protein similarity to known protein: HYPOTHETICAL 15.9 KDA HIT-LIKE PROTEIN.HYPOTHETICAL HIT-LIKE PROTEIN BB0379 - Borrelia burgdorferi (Lyme disease spirochete).Borrelia burgdorferi (Lyme disease spirochete)%3B SWISSPROT:YHIT_BORBU gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0340 Ta0340 360500 361666 - conserved hypothetical protein similarity to unknown protein: probable hexosyltransferase (EC 2.4.1.-) MJ1607 - Methanococcus jannaschii%3B PIR:F64500. Relation: weak similarity to Mannosyltransferase (EC 5.-.-.-) B - Escherichia coli%2C PIR2:I76776. gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term= 1192926 1192997 + tRNA-Cys Predicted Cys tRNA (Anticodon GCA) tRNA rna29 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0994 Ta0994 1064598 1066148 + gamma-glutamyltransferase related protein similarity to known protein: GAMMA-GLUTAMYLTRANSPEPTIDASE PRECURSOR (EC 2.3.2.2) - Pseudomonas sp. (strain A14)%3B SWISSPROT:GGT_PSESPFunction: involved in selenoamino acid metabolism%2C cyanoamino acid metabolism and glutathione metabolism. gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1024 Ta1024 1095282 1097033 - multidrug resistance protein related protein similarity to known protein: Bacillus subtilis DNA for multidrug transporter%2C complete cds%3B TREMBL:BSD0981_1 gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0575 Ta0575 604064 604981 - probable aspartate carbamoyltransferase%2C catalytic chain strong similarity to known protein: probable aspartate carbamoyltransferase catalytic chain - Pyrococcus horikoshii%3B PIR:A71119 gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0645 Ta0645 678470 679903 - amino acid permease related protein similarity to known protein: S.typhimurium ORF's 32 %26 48 %26 gene pykF%3B TREMBL:STPYKFORF_2 gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1027 Ta1027 1098845 1099714 - ABC transporter%2C ATP-binding protein related protein similarity to known protein: FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC - Actinobacillus pleuropneumoniae (Haemophilus pleuropneumoniae)%3B SWISSPROT:AFUC_ACTPL gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0869 Ta0869 934707 935711 + ABC transporter related protein similarity to known protein: Streptomyces rochei silent ABC transporter genes%3B TREMBL:SRY15759_2 gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0775 Ta0775 816275 817699 + sugar transport protein related protein similarity to known protein: probable sugar transport protein c0110 - Sulfolobus solfataricus%3B PIR:S74046 gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0161 Ta0161 164287 165159 + conserved hypothetical protein similarity to unknown protein: probable dehydrogenase - Streptomyces coelicolor%3B PIR:T34859 gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0499 Ta0499 529045 529758 - conserved hypothetical protein similarity to unknown protein: probable alanyl-tRNA synthetase APE0903 - Aeropyrum pernix (strain K1)%3B PIR:G72685Function: protein is to short (like PIR2:G72685!) to be a tRNA synthetase. gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1022 Ta1022 1091956 1093836 - molybdopterin biosynthesis protein (moeA-1) related protein similarity to known protein: MOLYBDOPTERIN BIOSYNTHESIS CNX1 PROTEIN (MOLYBDENUM COFACTORBIOSYNTHESIS ENZYME CNX1) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:CNX1_ARATH gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0834 Ta0834 895065 896840 + tungsten-containing aldehyde ferredoxin oxidoreductase related protein similarity to known protein: TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE (EC 1.2.7.-) - Pyrococcus furiosus%3B SWISSPROT:AOR_PYRFU gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0457 Ta0457 485288 486136 + hypothetical protein weak similarity to unknown protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term= 1533709 1533781 + tRNA-Gln Predicted Gln tRNA (Anticodon TTG) tRNA rna46 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0621 Ta0621 653444 654040 - hypothetical protein weak similarity to unknown protein gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0569 Ta0569 599432 600100 - hypothetical protein similarity to unknown proteinFunction: glycerolipid metabolism. gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1090 Ta1090 1162975 1163169 + conserved hypothetical protein strong similarity to unknown protein: DNA-directed RNA polymerase%2C chain E'' (rpoe2) PAB7428 - Pyrococcus abyssi (strain Orsay)%3B PIR:H75018 gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0502 Ta0502 532193 532600 + hypothetical membrane protein weak similarity to unknown protein gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0180 Ta0180 183097 183798 - ammonium transporter related protein similarity to known protein: Azospirillum brasilense ammonium transporter AmtB (amtB) gene%2C completecds%3B TREMBL:AF005275_1ORF_prediction: This gene encodes an N-terminal protein fragment of a putative ammonium transporter related protein jointly formed by this ORF and the one 3' downstream. A stop codon that is not suited to encode a selenocysteine interrupts the reading frame between this ORF and the one 3' downstream.. gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0962 Ta0962 1031061 1031375 - probable NADH dehydrogenase%2C chain K strong similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain NQO11 - Thermus aquaticus thermophilus%3B PIR:T11908 gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0109 Ta0109 102267 102497 - hypothetical protein no similarity gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term= 669964 670048 + tRNA-Leu Predicted Leu tRNA (Anticodon CAG) tRNA rna15 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1043 Ta1043 1113471 1115195 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein MTH1909 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:H69121 gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1423 Ta1423 1471317 1471778 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB1506 - Pyrococcus abyssi (strain Orsay)%3B PIR:B75041 gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0292 Ta0292 311745 313337 - 4-coumarate-CoA ligase related protein similarity to known protein: 4-coumarate--CoA ligase (EC 6.2.1.12) (clone 4CL2) [validated] - quaking aspen%3B PIR:T08075 gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0231 Ta0231 236682 237224 - hypothetical protein weak similarity to unknown protein gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0174 Ta0174 179189 180004 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF1704 - Archaeoglobus fulgidus%3B PIR:G69462 gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0745 Ta0745 788451 789329 - dihydrodipicoline synthase related protein similarity to known protein: N-ACETYLNEURAMINATE LYASE SUBUNIT (EC 4.1.3.3) (N-ACETYLNEURAMINICACID ALDOLASE) (N-ACETYLNEURAMINATE PYRUVATE LYASE) (NALASE) - Escherichia coli%3B SWISSPROT:NPL_ECOLI gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0588 Ta0588 621460 621903 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein yxiE N17E [imported] - Bacillus subtilis%3B PIR:A70077 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0993 Ta0993 1063618 1064547 + hypothetical membrane protein no similarity gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0048 Ta0048 46709 48139 + phosphate permease related protein similarity to known protein: phosphate transport protein - Glomus versiforme%3B PIR:S67491 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term= 1404530 1404604 + tRNA-Arg Predicted Arg tRNA (Anticodon CCT) tRNA rna39 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0894 Ta0894 962736 963344 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0814 - Pyrococcus horikoshii%3B PIR:A71131 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0523 Ta0523 551843 553210 + probable adenylosuccinate lyase strong similarity to known protein: adenylosuccinate lyase (EC 4.3.2.2) - Bacillus subtilis%3B PIR1:WZBSDSFunction: Purine metabolism%2C Alanine and Aspartate metabolism. gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0354 Ta0354 375479 375844 + hypothetical membrane protein no similarity gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0668 Ta0668 701783 702751 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0534 - Archaeoglobus fulgidus%3B PIR:F69316 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1387 Ta1387 1433158 1434246 + hypothetical protein weak similarity to known protein. Relation: weak similarity to 364K Golgi complex-associated protein - rat%2C PIR2:JC5837. gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0203 Ta0203 203117 204562 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein yurU - Bacillus subtilis%3B PIR:D70019 gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0870 Ta0870 935712 936515 + conserved hypothetical membrane protein similarity to unknown protein: probable membrane protein APE2578 - Aeropyrum pernix (strain K1)%3B PIR:C72492 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0095 Ta0095 90663 90953 - conserved hypothetical protein similarity to unknown protein: hypothetical protein AF1111 - Archaeoglobus fulgidus%3B PIR:F69388 gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0874 Ta0874 940097 940921 - hypothetical protein weak similarity to known protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0063 Ta0063 59733 62045 - DNA topoisomerase III beta related protein similarity to known protein. Relation: similarity to DNA topoisomerase III beta (TOP3 beta)%2C Homo sapiens%2C EMBL:AF053082. gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1448 Ta1448 1495680 1496111 - ferredoxin known protein: FERREDOXIN - Thermoplasma acidophilum%3B SWISSPROT:FER_THEAC gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1135 Ta1135 1201790 1202563 - hypothetical protein no similarity gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0720 Ta0720 764827 765357 + hypothetical protein no similarity gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0699 Ta0699 739973 740302 + hypothetical protein weak similarity to known protein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0020 Ta0020 17617 18135 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF2157 - Archaeoglobus fulgidus%3B PIR:E69519 gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1159 Ta1159 1230982 1231428 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MJ1627 - Methanococcus jannaschii%3B PIR:A64503 gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term= 960858 960930 + tRNA-Thr Predicted Thr tRNA (Anticodon CGT) tRNA rna19 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0989 Ta0989 1058575 1059270 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE1169 - Aeropyrum pernix (strain K1)%3B PIR:D72587 gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1366 Ta1366 1413830 1414204 - probable glycine cleavage system H protein strong similarity to known protein: GLYCINE CLEAVAGE SYSTEM H PROTEIN - Escherichia coli%3B SWISSPROT:GCSH_ECOLI gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0417 Ta0417 443700 443960 + hypothetical protein no similarity gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0880 Ta0880 947914 948777 + ribokinase related protein similarity to known protein: B.subtilis rbsR%2C rbsK%2C rbsD%2C rbsA%2C rbsC and rbsB (partial) genes%3B TREMBL:BSRIBOSOP_2 gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0485 Ta0485 516916 517629 - hypothetical protein no similarity gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0968 Ta0968 1034396 1034848 - NADH dehydrogenase%2C chain C related protein similarity to known protein: NADH DEHYDROGENASE I CHAIN C (EC 1.6.5.3) (NADH-UBIQUINONEOXIDOREDUCTASE CHAIN 3) (NUO3) - Escherichia coli%3B SWISSPROT:NUOC_ECOLI gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1215 Ta1215 1284151 1284777 + hypothetical protein no similarity gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0700 Ta0700 740272 740742 + hypothetical protein weak similarity to known protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1007 Ta1007 1077631 1078278 + hypothetical membrane protein no similarity gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0458 Ta0458 486404 487114 + hypothetical protein weak similarity to unknown protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1394 Ta1394 1440956 1441609 + Nta operon transcriptional regulator related protein similarity to known protein: NTA OPERON TRANSCRIPTIONAL REGULATOR - Chelatobacter heintzii%3B SWISSPROT:NTRA_CHEHE gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0649 Ta0649 682915 684216 - argininosuccinate lyase related protein similarity to known protein: argininosuccinate lyase (EC 4.3.2.1) - goose%3B PIR:JN0486 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1189 Ta1189 1259851 1261032 - probable glycine C-acetyltransferase strong similarity to known protein: glycine C-acetyltransferase (EC 2.3.1.29) - Escherichia coli%3B PIR:XUECGAFunction: involved in glycine%2C serine and threonine metabolism. gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0822 Ta0822 880326 881135 + 3-oxoacyl-[acyl-carrier-protein] reductase related protein similarity to known protein: 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) precursor%2C NADPH-dependent [validated] - Cuphea lanceolata%3B PIR:S22450 gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0850 Ta0850 916487 916903 + hypothetical protein no similarity gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term= 384199 384270 + tRNA-Val Predicted Val tRNA (Anticodon GAC) tRNA rna8 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1438 Ta1438 1487625 1488638 - probable 3-methyl-2-oxobutanoate dehydrogenase alpha chain precursor strong similarity to known protein: 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) (EC 1.2.4.4) alpha chain precursor - human%3B PIR:DEHUXAORF_prediction: The N-terminus of this protein is short by 60aa compared to other proteins%2C sequence analysis clearly rules out an elongated N-terminus.. gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0627 Ta0627 658565 658855 + pyruvate ferredoxin oxidoreductase%2C delta subunit related protein similarity to known protein: PYRUVATE SYNTHASE SUBUNIT PORD (EC 1.2.7.1) (PYRUVATE OXIDOREDUCTASEDELTA CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE DELTA SUBUNIT) - Pyrococcus furiosus%3B SWISSNEW:PORD_PYRFU gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0527 Ta0527 555518 556993 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0735 - Archaeoglobus fulgidus%3B PIR:G69341 gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0798 Ta0798 852182 852475 - hypothetical protein weak similarity to unknown protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1239 Ta1239 1304340 1305191 - hypothetical protein weak similarity to unknown protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0509 Ta0509 539296 539757 - hypothetical membrane protein no similarity gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0528 Ta0528 556990 558042 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1012 - Archaeoglobus fulgidus%3B PIR:D69376 gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1072 Ta1072 1145154 1146038 - ABC transporter ATP-binding protein related protein similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene%2C completecds%3B and unknown genes%3B TREMBL:AF007381_3 gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0463 Ta0463 491745 492185 + probable methylmalonyl-CoA mutase%2C alpha subunit%2C C-terminus strong similarity to known protein: Streptomyces collinus coenzyme B12-dependent mutase (meaA) gene%2C completecds%3B TREMBL:SCAF8569_1Function: involved in valine%2C leucine and isoleucine degradation and propanoate metabolism. gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0957 Ta0957 1025660 1025905 - hypothetical protein no similarity gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1177 Ta1177 1248007 1249632 - hypothetical membrane protein weak similarity to known proteinORF_prediction: Presence of protein splicing possible%2C but not predictable.%2C possible location of the Intein aa 186-400. gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0919 Ta0919 988563 989864 - conserved hypothetical protein similarity to unknown protein: hypothetical protein slr2013 - Synechocystis sp. (strain PCC 6803)%3B PIR:S75346 gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1068 Ta1068 1141276 1142340 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein APE1825 - Aeropyrum pernix (strain K1)%3B PIR:G72567 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1053 Ta1053 1124119 1124697 - N-carbamoylsarcosine amidase related protein similarity to known protein: N-carbamoylsarcosine amidase (EC 3.5.1.59) - Arthrobacter sp.%3B PIR:S28969 gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0652 Ta0652 686286 686918 + hypothetical protein no similarity gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1363 Ta1363 1411643 1412581 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1787 - Archaeoglobus fulgidus%3B PIR:B69473 gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1262 Ta1262 1318477 1318806 - probable ribosomal protein S17 strong similarity to known protein: ribosomal protein S17 [validated] - Haloarcula marismortui%3B PIR:R3HS17 gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1193 Ta1193 1263396 1264604 + aspartate aminotransferase related protein similarity to known protein: AROMATIC AMINO ACID AMINOTRANSFERASE II (EC 2.6.1.-) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:ARO9_YEAST gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1063 Ta1063 1134882 1136432 + hypothetical membrane protein no similarity gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1447 Ta1447 1495209 1495568 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein - Thermoplasma acidophilum%3B PIR:T37334 gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0004 Ta0004 2183 4477 + probable ATP synthase%2C subunit A (intein containing) strong similarity to known protein: Thermococcus sp. gene for ATPase alpha subunit%2C ATPase beta subunit%2C complete sequence%3B TREMBL:D88772_1ORF_prediction: This ORF is predicted to contain a 'mini intein': Location in Extein K235 Intein Size (aa) 174 Intein N-terminal AVPGPFGSGK/C (C236) Intein C-terminal HN/TVIQHQLAKW (W419). gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1065 Ta1065 1137518 1137772 - hypothetical protein weak similarity to known protein gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0158 Ta0158 160190 161320 - conserved hypothetical protein similarity to unknown protein: probable phosphoesterase (EC 3.1.-.-) MJ1323 - Methanococcus jannaschii%3B PIR:B64465 gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0827 Ta0827 887419 888396 - hypothetical protein weak similarity to known protein gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0493 Ta0493 524282 524770 + molybdopterin biosynthesis protein MoaB related protein similarity to known protein: MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN B - Escherichia coli%3B SWISSPROT:MOAB_ECOLI gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0264 Ta0264 273467 274264 + probable dipeptide transport system permease protein dppC strong similarity to known protein: dipeptide transport system permease protein dppC - Escherichia coli%3B PIR2:S47764 gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0011 Ta0011 10713 11651 - UDP-glucose 4-epimerase related protein similarity to known protein: UDP-GLUCOSE 4-EPIMERASE (EC 5.1.3.2) (GALACTOWALDENASE) (UDP-GALACTOSE 4-EPIMERASE) - Corynebacterium diphtheriae%3B SWISSPROT:GALE_CORDIFunction: Galactose metabolism%2C Nucleotide sugars metabolism. gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0178 Ta0178 181463 182065 + hypothetical protein no similarity gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0648 Ta0648 682066 682914 + conserved hypothetical protein similarity to unknown protein: HYPOTHETICAL 31.5 KDA PROTEIN - Sulfolobus acidocaldarius%3B SWISSPROT:Y31K_SULAC. Relation: similarity to eucaryotic senescence marker protein. gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1000 Ta1000 1069858 1072515 - DNA helicase II (UvrD) related protein similarity to known protein: ATP-DEPENDENT HELICASE PCRA (EC 3.6.1.-).ATP-DEPENDENT DNA HELICASE PCRA (EC 3.6.1.-) - Bacillus stearothermophilus.Bacillus stearothermophilus%3B SWISSPROT:PCRA_BACSTORF_prediction: C-terminus around 200 aa longer than the other DNA helicases. gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1008 Ta1008 1078420 1079262 + conserved hypothetical membrane protein strong similarity to unknown protein: sor 3'-region hypothetical protein 1 - Desulfurolobus ambivalens%3B PIR:C43331 gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0184 Ta0184 186349 187959 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH1394 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:E69052 gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1034 Ta1034 1106026 1107270 - conserved hypothetical membrane protein similarity to unknown protein: fosmidmycin resistance protein homolog yfnC - Bacillus subtilis%3B PIR:F69814 gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0585 Ta0585 614647 615012 - hypothetical membrane protein no similarity gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0234 Ta0234 241585 242511 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein NMB1620 [imported] - Neisseria meningitidis (group B strain MD58)%3B PIR:B81062 gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0435 Ta0435 460778 461644 - heme A: farnesyltransferase related protein similarity to known protein: Homo sapiens heme A: farnesyltransferase (COX10) gene%2C exon 7 and completecds%3B TREMBL:HSUEMEA7_1 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1251 Ta1251 1313328 1313993 - probable 30S ribosomal protein S5 strong similarity to known protein: ribosomal protein S5 [similarity] - Haloarcula marismortui%3B PIR:S16542 gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1297 Ta1297 1347091 1347387 + probable ribosomal protein L21E strong similarity to known protein: ribosomal protein L21.eR [validated] - Haloarcula marismortui%3B PIR1:R5HS31 gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0154 Ta0154 154367 155557 - conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein yqgE - Bacillus subtilis%3B PIR:H69955 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1405 Ta1405 1456517 1457887 - 4-HYDROXYBENZOATE TRANSPORTER related protein similarity to known protein: 4-HYDROXYBENZOATE TRANSPORTER - Pseudomonas putida%3B SWISSPROT:PCAK_PSEPU gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0518 Ta0518 547489 548355 - hypothetical protein no similarity gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0570 Ta0570 600134 600634 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF2001 - Archaeoglobus fulgidus%3B PIR:H69499 gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0658 Ta0658 690854 691540 + precorrin-2 methyltransferase related protein similarity to known protein: precorrin-2 methyltransferase (EC 2.1.1.-) - Pseudomonas sp.%3B PIR:D36145 gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0626 Ta0626 657972 658559 + probable pyruvate ferredoxin oxidoreductase%2C gamma subunit strong similarity to known protein: PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES COMMON GAMMA SUBUNIT[INCLUDES: PYRUVATE SYNTHASE SUBUNIT PORC (EC 1.2.7.1) (PYRUVATEOXIDOREDUCTASE GAMMA CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASEGAMMA SUBUNIT)%3B KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORC(EC 1.-.-.-) (VOR) (2-OXOISOVALERATE OXIDOREDUCTASE GAMMA CHAIN) (2-OXOISOVALERATE-FERREDOXIN OXIDOREDUCTASE GAMMA SUBUNIT)] - Pyrococcus furiosus%3B SWISSNEW:PORC_PYRFUFunction: Pyruvate metabolism%2C Propanoate metabolism%2C Butanoate metabolism%2C Reductive carboxylate cycle (CO2 fixation). gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0254 Ta0254 261218 261907 + hypothetical membrane protein no similarity gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1399 Ta1399 1447266 1449137 - hypothetical protein no similarity gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0830 Ta0830 892509 893390 + proline iminopeptidase known protein: probable prolyl aminopeptidase (EC 3.4.11.5) - Thermoplasma acidophilum%3B PIR:T37465 gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1157 Ta1157 1228942 1229820 + dihydrodipicoline synthase related protein similarity to known protein: DIHYDRODIPICOLINATE SYNTHASE (EC 4.2.1.52) (DHDPS) - Prochlorococcus marinus%3B SWISSPROT:DAPA_PROMA. Relation: also similar to 2-keto-3-deoxy gluconate aldolase TREMBL:SSO224174_1. gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term= 459092 459164 + tRNA-Pro Predicted Pro tRNA (Anticodon GGG) tRNA rna11 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1314 Ta1314 1362325 1363176 - site-specific integrase/recombinase XerD related protein similarity to known protein: site-specific integrase/recombinase%2C with XerC - Escherichia coli%3B PIR:A39202 gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0661 Ta0661 694262 695698 + hypothetical protein weak similarity to known protein. Relation: weak similarity to putative amino acid permease - Streptomyces coelicolor%2C TREMBLNEW:SCI30A_4 (cosmid sequencing). gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0382 Ta0382 407691 408029 + hypothetical protein weak similarity to unknown protein gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0615 Ta0615 646389 648044 + hypothetical membrane protein no similarity gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1402 Ta1402 1451539 1452555 - hypothetical protein weak similarity to unknown protein gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0947 Ta0947 1016770 1017714 + beta-hydroxybutyryl-CoA dehydrogenase related protein similarity to known protein: beta-hydroxybutyryl-CoA dehydrogenase%2C NAD-dependent (EC 1.1.1.-) - Clostridium acetobutylicum%3B PIR:A43723Function: poly beta-hydroxybutyrate biosynthesis. gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0884 Ta0884 951451 951795 + ferredoxin related protein similarity to known protein: NAPHTHALENE 1%2C 2-DIOXYGENASE SYSTEM FERREDOXIN COMPONENT - Pseudomonas putida%2C and Pseudomonas sp. (strain C18)%3B SWISSPROT:NDOA_PSEPU gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1052 Ta1052 1122880 1124082 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0151 - Pyrococcus horikoshii%3B PIR:E71236 gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0040 Ta0040 36444 38819 - valyl-tRNA synthetase related protein similarity to known protein: VALYL-TRNA SYNTHETASE (EC 6.1.1.9) (VALINE--TRNA LIGASE) (VALRS) - Bacillus stearothermophilus%3B SWISSPROT:SYV_BACST gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0192 Ta0192 193466 193990 - conserved hypothetical protein weak similarity to known protein. Relation: weak similarity to eryG protein (S-adenosylmethionine (SAM)-dependent methyltransferase)%2C Saccharopolyspora erythraea%2C PIR2:S18533. gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1269 Ta1269 1321784 1322038 - probable 50S ribosomal protein L23 strong similarity to known protein: ribosomal protein L23 - Methanococcus vannielii%3B PIR:R5MX23 gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1033 Ta1033 1105397 1105912 - probable ribosomal protein S13 strong similarity to known protein: ribosomal protein S13 [similarity] - Haloarcula marismortui%3B PIR:A44126 gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0324 Ta0324 344065 345654 + O-sialoglycoprotein endopeptidase related protein similarity to known protein: O-sialoglycoprotein endopeptidase (EC 3.4.24.57) [validated] - Pasteurella haemolytica (serotype A1)%3B PIR2:A38108 gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0840 Ta0840 906394 908631 - VAT ATPase (VCP-like ATPase) known protein: VCP-like ATPase - Thermoplasma acidophilum%3B PIR:T37458 gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0133 Ta0133 129948 130733 + pirin related protein similarity to known protein: H.sapiens mRNA for Pirin%2C isolate 1%3B TREMBL:HSPIRIN1_1 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0483 Ta0483 513977 514972 - proline dipeptidase related protein similarity to known protein: Pyrococcus furiosus proline dipeptidase gene%2C partial cds%3B TREMBL:AF060010_1 gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0756 Ta0756 798817 800025 - muconate cycloisomerase related protein similarity to known protein: hypothetical 64.0 kD protein in ibpA-gyrB intergenic region - Escherichia coli (strain K-12)%3B PIR:E65171Function: possibly involved in Phenylalanin metabolism. gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0950 Ta0950 1019797 1020261 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MTH1228 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:A69031 gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1317 Ta1317 1364943 1365428 - hypothetical membrane protein no similarity gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0788 Ta0788 835742 837052 - diaminopimelate decarboxylase related protein similarity to known protein: tabA protein - Pseudomonas syringae%3B PIR:S27649ORF_prediction: This ORF might start 35 aa later (starting with amino acids MGIYD...). In this case the ORFs N-terminus would better fit the N-termini of related known diaminopimelate decarboxylases%2C however - overall the ORF would be about 20 aa shorter. Codon usage curves and the frequency of rare codons do not clearly favor one of the alternatives%2C we kept the longer ORF version.. gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0256 Ta0256 262975 264180 - hypothetical protein no similarity gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0159 Ta0159 161338 162882 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF1060 - Archaeoglobus fulgidus%3B PIR:D69382 gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1259 Ta1259 1316947 1317660 - 30S RIBOSOMAL PROTEIN S4E known protein: ribosomal protein s4e - Thermoplasma acidophilum%3B PIR:T37467 gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0278 Ta0278 292538 292861 - hypothetical protein no similarity gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0328 Ta0328 347994 348770 + FIXA (related to carnitine metabolism) related protein similarity to known protein: FIXA PROTEIN.FIXA PROTEIN - Escherichia coli.Escherichia coli%3B SWISSPROT:FIXA_ECOLI gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0910 Ta0910 980881 981690 - translation initiation factor eIF-2B%2C subunit delta related protein similarity to known protein: TRANSLATION INITIATION FACTOR EIF-2B ALPHA SUBUNIT (EIF-2B GDP-GTPEXCHANGE FACTOR) - Homo sapiens (Human)%3B SWISSPROT:E2BA_HUMAN gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0703 Ta0703 744825 746363 - repeating unit transporter related protein similarity to known protein: Streptococcus pneumoniae type 33F DNA%2C capsular gene cluster%3B TREMBL:SPAJ6986_13 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0034 Ta0034 29986 30270 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:C72333 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0334 Ta0334 355231 356568 - inorganic phosphate transporter related protein similarity to known protein: Arabidopsis thaliana mRNA for inorganic phosphate transporter%2C completecds%3B TREMBL:ATD591_1 gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0657 Ta0657 690249 690857 + precorrin-8W decarboxylase related protein similarity to known protein: PRECORRIN-8W DECARBOXYLASE (EC 1.-.-.-) - Salmonella typhimurium%3B SWISSPROT:CBIT_SALTY gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0897 Ta0897 966009 967094 + glucose 1-dehydrogenase known protein: glucose 1-dehydrogenase (EC 1.1.1.47) - Thermoplasma acidophilum%3B PIR:S29788 gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0734 Ta0734 775370 776215 - conserved hypothetical membrane protein weak similarity to known protein gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1086 Ta1086 1158785 1159312 + heat shock protein GrpE related protein similarity to known protein: GRPE PROTEIN (HSP-70 COFACTOR) - Thermus aquaticus (subsp. thermophilus)%3B SWISSPROT:GRPE_THETH gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0853 Ta0853 918310 919773 - ethanolamine permease related protein similarity to known protein: Rhodococcus erythropolis ORF1%2C ethanolamine permease (eutP)%2C ethanolamineammonia-lyase large subunit (eutB)%2C ethanolamine ammonia-lyase smallsubunit (eutC) genes%2C complete cds and ORF2 gene%2C partial cds%3B TREMBL:RSEUTPBC_2 gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0557 Ta0557 585730 586182 - hypothetical protein no similarity gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1134 Ta1134 1200994 1201680 + conserved hypothetical protein similarity to unknown protein: probable ORFZ protein - Pyrococcus horikoshii%3B PIR:G71114 gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1005 Ta1005 1076710 1077111 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1109 - Pyrococcus horikoshii%3B PIR:F71051 gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0665 Ta0665 699311 699661 - hypothetical protein no similarity gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0220 Ta0220 223543 224727 + aldehyd dehydrogenase%2C mitochondrial 3 precursor related protein similarity to known protein: probable aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) YOR374w - yeast (Saccharomyces cerevisiae)%3B PIR:S67286 gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0951 Ta0951 1020283 1020999 + transcription regulator (exsB) related protein similarity to known protein: protein ExsB - Rhizobium meliloti%3B PIR:S60183 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0416 Ta0416 442635 443630 - conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein AF1561 - Archaeoglobus fulgidus%3B PIR:H69444 gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1372 Ta1372 1418276 1418902 + hypothetical protein weak similarity to unknown protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0369 Ta0369 389058 389438 - hypothetical protein no similarity gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0323 Ta0323 343538 343912 - 30S ribosomal protein S6 related protein similarity to known protein: ribosomal protein S6.1%2C cytosolic - maize%3B PIR2:T04334 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0965 Ta0965 1031828 1032292 - NADH dehydrogenase%2C chain ndhI similarity to known protein: NADH dehydrogenase (ubiquinone) (EC 1.6.5.3) chain ndhI - Synechocystis sp. (strain PCC 6803)%3B PIR:FEYBQI gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0397 Ta0397 423592 424161 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein MTH1006 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:B69001 gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0722 Ta0722 766433 767260 + hypothetical protein no similarity gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0067 Ta0067 65043 66023 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PAB1273 - Pyrococcus abyssi (strain Orsay)%3B PIR:E75012 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0191 Ta0191 192628 193434 + probable glucose 1-dehydrogenase strong similarity to known protein: glucose 1-dehydrogenase (EC 1.1.1.47) - Bacillus megaterium%3B PIR:A33528 gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0985 Ta0985 1053911 1054678 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein jhp0619 - Helicobacter pylori (strain J99)%3B PIR:D71910 gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0846 Ta0846 912176 912775 - hypothetical protein no similarity gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1426 Ta1426 1473932 1474240 - hypothetical protein no similarity gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1164 Ta1164 1236699 1237295 - orotate phosphoribosyltransferase related protein similarity to known protein: Exophiala dermatitidis orotidine monophosphate pyrophosphorylase (WdURA5)gene%2C complete cds%3B TREMBL:AF022887_1 gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0378 Ta0378 403755 404531 + conserved hypothetical membrane protein similarity to unknown protein: signal sequence peptidase (sec11) homolog - Archaeoglobus fulgidus%3B PIR:F69473 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0623 Ta0623 655147 655509 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0451 - Pyrococcus horikoshii%3B PIR:D71156 gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0819 Ta0819 876379 877554 + probable citrate (si)-synthase strong similarity to known protein: CITRATE SYNTHASE (EC 4.1.3.7) - Thermoplasma acidophilum%3B SWISSPROT:CISY_THEAC gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0089 Ta0089 86779 87258 + gliding motility protein related similarity to known protein: Flavobacterium johnsoniae gliding motility protein (gldA) gene%2C completecds%3B and unknown genes%3B TREMBL:AF007381_3 gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0316 Ta0316 336979 338760 + conserved hypothetical protein strong similarity to unknown protein: twitching mobility (pilt) related protein (pilt) PAB1633 - Pyrococcus abyssi (strain Orsay)%3B PIR:H75089 gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1017 Ta1017 1087326 1088549 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0449 - Pyrococcus horikoshii%3B PIR:B71156 gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0175 Ta0175 180032 180706 - conserved hypothetical protein similarity to unknown protein: hypothetical protein c04028 - Sulfolobus solfataricus%3B PIR:S75394 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0455 Ta0455 483315 483803 - conserved hypothetical protein strong similarity to unknown protein: probable acetyltransferase APE0389 - Aeropyrum pernix (strain K1)%3B PIR:D72731 gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1421 Ta1421 1470437 1470928 + hypothetical protein no similarity gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0141 Ta0141 137618 138958 + proline/betaine transport protein related similarity to known protein: proline/betaine transport protein - Escherichia coli%3B PIR:S32331 gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0387 Ta0387 411551 412627 + conserved hypothetical protein similarity to unknown protein: hypothetical protein MJ1159 - Methanococcus jannaschii%3B PIR:F64444 gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0418 Ta0418 444195 445085 + hypothetical membrane protein no similarity gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1396 Ta1396 1443256 1444497 + hypothetical protein no similarity gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0413 Ta0413 439324 440538 - conserved hypothetical protein strong similarity to unknown protein: phosphonopyruvate decarboxylase (EC 4.1.1.-) - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:D69079 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1204 Ta1204 1273439 1273636 - ribosomal protein S27 related protein similarity to known protein: Chlamydomonas sp. mRNA for ribosomal protein S27%2C NaCl inducible%2C completecds%2C clone:NaEX96-53.gene: RS27%3B product: ribosomal protein S27%3B Chlamydomonas sp. HS-5 mRNA for ribosomal protein S27%2C NaCl inducible%2C complete cds%2C clone:NaEX96-53%3B TREMBL:AU066514_1ORF_prediction: This ORF may be 22 aa longer starting with MSQSNYST... Whereas the frequency of rare codons would support this earlier start or the reading frame%2C codon usage is rather moderate in this hypothetical ORF region. Since the related forms of related archaebacterial proteins are shorter as well%2C we suggest a shorter version of this ORF. There is no sequence similarity to the more elongated N-termini of eukaryotic related proteins.. gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0124 Ta0124 117568 118305 - alanyl-tRNA synthetase related protein similarity to known protein: alanine--tRNA ligase (EC 6.1.1.7) - silkworm%3B PIR1:SYMTAT gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1107 Ta1107 1178176 1179258 - phosphoribosylaminoimidazole carboxylase related protein similarity to known protein: carboxylase (EC 4.1.1.21))%3B TREMBL:ECPUREK_2 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1160 Ta1160 1231558 1231743 + probable DNA-directed RNA polymerase%2C chain K (rpok) strong similarity to known protein: DNA-DIRECTED RNA POLYMERASES I%2C II%2C AND III 15 KDA POLYPEPTIDE(EC 2.7.7.6) (RPABC6) - Schizosaccharomyces pombe (Fission yeast)%3B SWISSPROT:RPB6_SCHPO gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0406 Ta0406 432922 434235 + 3-hydroxy-3-methylglutaryl-coenzyme A reductase related protein similarity to known protein: hydroxymethylglutaryl-CoA reductase (EC 1.1.1.88) - Pseudomonas sp.%3B PIR:A44756 gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1004 Ta1004 1075695 1076066 + succinate dehydrogenase%2C subunit D known protein: hypothetical protein - Thermoplasma acidophilum%3B PIR:S34621 gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0679 Ta0679 715671 717068 + hypothetical membrane protein weak similarity to unknown protein gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0253 Ta0253 260649 261161 + hypothetical membrane protein no similarity gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0670 Ta0670 704413 706128 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF2316 - Archaeoglobus fulgidus%3B PIR:D69539 gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0851 Ta0851 916860 917363 - hypothetical protein no similarity gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0452 Ta0452 479881 481341 - sugar transport protein related protein similarity to known protein: B.megaterium xylR gene%3B TREMBL:BMXYLRABT_4 gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0232 Ta0232 238805 240211 - hypothetical membrane protein no similarity gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1359 Ta1359 1408574 1409203 - ATP binding cassette transporter%2C ExsD protein related similarity to known protein: Rhizobium meliloti 10.6kB DNA fragment from exoB to exsG gene%3B TREMBL:RM106EXOB_5 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0783 Ta0783 828411 829724 + hypothetical protein weak similarity to unknown protein gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0054 Ta0054 50757 51035 + 50S ribosomal protein L31 related proten similarity to known protein: 60S RIBOSOMAL PROTEIN L31 - Nicotiana glutinosa (Tobacco)%3B SWISSPROT:RL31_NICGU gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0832 Ta0832 893955 894629 + NADPH-dependent butanol dehydrogenase related protein weak similarity to known protein gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0087 Ta0087 85509 86333 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PH1365 - Pyrococcus horikoshii%3B PIR:G71008 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1489 Ta1489 1540339 1541421 - GTP-binding protein known protein: GTP-binding protein - Thermoplasma acidophilum%3B PIR:T43254 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1091 Ta1091 1163177 1163647 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB1106 - Pyrococcus abyssi (strain Orsay)%3B PIR:A75019 gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0335 Ta0335 356740 357684 + mannose-1-phosphate guanyltransferase related protein similarity to known protein: mannose-1-phosphate guanylyltransferase (EC 2.7.7.13) - yeast (Saccharomyces cerevisiae)%3B PIR:S67590 gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0319 Ta0319 340536 340865 + hypothetical protein no similarity gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0371 Ta0371 392567 393628 + conserved hypothetical protein similarity to unknown protein: trifolitoxin synthesis protein TfxB - Rhizobium leguminosarum%3B PIR:B47116 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0606 Ta0606 638367 638855 + hypothetical protein no similarity gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term= 148226 148300 + tRNA-Glu Predicted Glu tRNA (Anticodon CTC) tRNA rna1 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0140 Ta0140 137198 137533 - conserved hypothetical protein weak similarity to known protein. Relation: weak similarity to CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT%2C Chlorobium limicola%2C SWISSPROT:UCRI_CHLLT. gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0559 Ta0559 586876 588492 + conserved hypothetical protein strong similarity to unknown protein: probable flagella-related protein I PAB1386 - Pyrococcus abyssi (strain Orsay)%3B PIR:C75062 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0410 Ta0410 436538 438283 + virginiamycin S resistance gene VarS related protein similarity to known protein: Streptomyces virginiae varS (virginiamycin S resistance) gene%2C completecds%3B TREMBL:AB019519_1 gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1302 Ta1302 1350372 1350755 + hypothetical protein no similarity gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0345 Ta0345 368076 368447 + hypothetical protein no similarity gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0266 Ta0266 275233 276177 + oligopeptide transport ATP-binding protein appF related protein similarity to known protein: oligopeptide transport ATP-binding protein appF - Bacillus subtilis%3B PIR2:I40544 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1310 Ta1310 1357150 1358907 - H+/K+-transporting ATPase chain A related protein similarity to known protein: H+/K+-exchanging ATPase (EC 3.6.1.36) chain A [validated] - Escherichia coli%3B PIR:PWECAK gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0631 Ta0631 661556 662761 + coenzyme PQQ synthesis protein related protein similarity to known protein: probable coenzyme PQQ synthesis protein APE1655 - Aeropyrum pernix (strain K1)%3B PIR:C72546. Relation: similarity found to heme biosynthesis protein - Archaeoglobus fulgidus%2C PIR:H69500. gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0872 Ta0872 937758 938420 + iron-dependent transcription repressor related protein similarity to known protein: diphtheria toxin repressor homolog - Streptomyces pilosus%3B PIR:JC4513 gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1443 Ta1443 1491774 1492355 - transposon tn10 jemc related protein similarity to known protein: Shigella flexneri transposon Tn10 IS10-left transposase%2C JemA (jemA)%2C JemB(jemB)%2C JemC (jemC)%2C TetR (tetR)%2C TetA (tetA)%2C TetC (tetC)%2C TetD (tetD)%2C and IS10-right transposase genes%2C complete cds%3B TREMBL:AF162223_4 gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0829 Ta0829 889774 890703 + hypothetical protein weak similarity to known protein gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0284 Ta0284 301785 302591 - shikimate 5-dehydrogenase related protein similarity to known protein: 3-dehydroquinate dehydratase (EC 4.2.1.10) / shikimate 5-dehydrogenase (EC 1.1.1.25) precursor - common tobacco (fragment)%3B PIR:S46210 gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1178 Ta1178 1249629 1250447 - ABC transporter%2C ATP-binding protein related protein similarity to known protein: NITRATE TRANSPORT PROTEIN NASD - Klebsiella pneumoniae%3B SWISSPROT:NASD_KLEPN gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0597 Ta0597 628548 629930 + purine-cytosine permease related protein similarity to known protein gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term= 1185299 1185383 + tRNA-Ser Predicted Ser tRNA (Anticodon GGA) tRNA rna28 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1153 Ta1153 1223854 1225950 + probable acetyl-CoA synthetase strong similarity to known protein: Giardia intestinalis acetyl-CoA synthetase gene%2C complete cds%3B TREMBL:AF107206_1 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0912 Ta0912 982762 983031 - probable DNA binding protein (Ssh10b related) strong similarity to known protein: S.shibatae topR gene%3B TREMBL:SSHTOPR_3Function: personal communication with Patrick Forterre. gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1110 Ta1110 1180755 1181087 + transcription regulator ArsR related protein similarity to known protein: Pseudomonas aeruginosa ars operon%2C regulator (arsR)%2C membrane pump (arsB)and arsenate reductase (arsC) genes%2C complete cds%3B TREMBL:AF010234_1 gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1390 Ta1390 1435789 1437066 - conserved hypothetical protein similarity to unknown protein: hypothetical protein 468 - Sphingomonas aromaticivorans plasmid pNL1%3B PIR:T31178 gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1472 Ta1472 1519832 1520155 - conserved hypothetical protein similarity to unknown protein. Relation: similarity to various putative transposases. gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0317 Ta0317 338767 339273 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0984 - Pyrococcus horikoshii%3B PIR:C71090 gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1307 Ta1307 1353719 1354540 + hypothetical protein weak similarity to unknown protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1490 Ta1490 1541491 1544706 + tricorn protease known protein: tricorn proteinase - Thermoplasma acidophilum%3B PIR:T43255 gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0548 Ta0548 579182 579802 + hypothetical membrane protein no similarity gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0404 Ta0404 430570 431472 - DIHYDROOROTATE DEHYDROGENASE B related protein similarity to known protein: DIHYDROOROTATE DEHYDROGENASE B (EC 1.3.3.1) (DIHYDROOROTATE OXIDASE B)(DHODEHASE B) (DHODB).DIHYDROOROTATE DEHYDROGENASE B%2C CATALYTIC SUBUNIT (EC 1.3.3.1)(DIHYDROOROTATE OXIDASE B) (DHODEHASE B) (DHODASE B) (DHOD B) - Lactococcus lactis (subsp. cremoris) (Streptococcus cremoris).Lactococcus lactis (subsp. cremoris) (Streptococcus cremoris)%3B SWISSPROT:PYDB_LACLC gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0092 Ta0092 88875 89429 + probable 30S RIBOSOMAL PROTEIN S7 strong similarity to known protein: 30S RIBOSOMAL PROTEIN S7P - Methanococcus vannielii%3B SWISSPROT:RS7_METVA gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0414 Ta0414 440690 442144 - GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN related protein similarity to known protein: GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN (EC 1.4.1.13) (GLUTAMATESYNTHASE BETA SUBUNIT) (NADPH-GOGAT) (GLTS BETA CHAIN) - Escherichia coli%3B SWISSPROT:GLTD_ECOLI gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1104 Ta1104 1175877 1176848 + probable DNA repair protein Rad51 (RadA) strong similarity to known protein: RAD51 protein - yeast (Saccharomyces cerevisiae)%3B PIR:A44348 gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0333 Ta0333 353982 355205 + conserved hypothetical protein strong similarity to unknown protein: mRNA 3'-end processing factor homolog - Archaeoglobus fulgidus%3B PIR:D69316 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0492 Ta0492 523763 524194 - molybdopterin biosynthesis protein MoaC related protein similarity to known protein: MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN C - Escherichia coli%3B SWISSPROT:MOAC_ECOLI gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0931 Ta0931 999531 1000550 + conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB1040 - Pyrococcus abyssi (strain Orsay)%3B PIR:C75005 gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1304 Ta1304 1350999 1351985 - conserved hypothetical protein similarity to unknown protein: hypothetical protein Rv0115 - Mycobacterium tuberculosis (strain H37RV)%3B PIR:F70840 gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0971 Ta0971 1035975 1037786 - Glu-tRNA amidotransferase%2C subunit B related protein similarity to known protein: Bacillus subtilis Glu-tRNAGln amidotransferase subunits C (gatC)%2C A (gatA)and B (gatB) genes%2C complete cds%3B TREMBLNEW:AF008553_3 gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1095 Ta1095 1164474 1165565 - conserved hypothetical protein similarity to unknown protein: hypothetical protein AF1496 - Archaeoglobus fulgidus%3B PIR:G69436 gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1126 Ta1126 1194514 1194894 - hypothetical membrane protein no similarity gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0187 Ta0187 190068 190232 - hypothetical protein weak similarity to known protein. Relation: weak similarity to divalent cation tolerance protein cutA1%2C E. coli%2C PIR2:I41027. gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0815 Ta0815 869765 872107 + tricorn protease interacting factor F3 known protein: Tricorn proteinase interacting factor F3 (EC 3.4.11.-) - Thermoplasma acidophilum%3B PIR:T37456 gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0367 Ta0367 386297 388153 + hypothetical membrane protein no similarity gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1049 Ta1049 1120574 1120927 + hypothetical protein no similarity gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term= 1475300 1475770 + 16S ribosomal RNA rRNA rna41 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0883 Ta0883 950614 951387 + methyltransferase DPH5 related protein (diphthamide biosynthesis) similarity to known protein: methyltransferase DPH5 [validated] - yeast (Saccharomyces cerevisiae)%3B PIR:S30890 gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1041 Ta1041 1112214 1112582 + conserved hypothetical protein weak similarity to unknown protein gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1422 Ta1422 1471028 1471315 + hypothetical protein no similarity gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0260 Ta0260 268488 269345 + probable pyruvate ferredoxin oxidoreductase%2C beta subunit strong similarity to known protein: 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) beta chain - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:H69170 gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1428 Ta1428 1476074 1477201 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0759 - Pyrococcus horikoshii%3B PIR:H71123 gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1458 Ta1458 1504217 1504855 - probable ribonuclease HII strong similarity to known protein: Pyrococcus kodakaraensis rnhB gene for ribonuclease HII%2C complete cds%3B TREMBL:AB012613_1 gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0995 Ta0995 1066213 1066974 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB0735 - Pyrococcus abyssi (strain Orsay)%3B PIR:G75089 gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0762 Ta0762 804138 804746 + 2-phosphoglycerate kinase related protein similarity to known protein: 2-phosphoglycerate kinase - Methanothermus fervidus%3B PIR:S41582 gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1407 Ta1407 1459253 1460044 - flagellin B3 precursor related protein similarity to known protein: Methanococcus vannielii flagellin FlaB1 (flaB1)%2C FlaB2 (flaB2)%2C and FlaB3(flaB3) genes%2C complete cds%3B TREMBL:MVU76620_1ORF_prediction: The N-terminus apparently is about 40 amino acids longer than those ones of related sequences. We propose this start due to the significantly good codon usage in the N-terminal part of this ORF.. gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1079 Ta1079 1151870 1152637 + cobalamin synthase related protein similarity to known protein: COBALAMIN [5'-PHOSPHATE] SYNTHASE (EC 2.-.-.-) - Salmonella typhimurium%3B SWISSPROT:COBS_SALTY gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1232 Ta1232 1297929 1298603 + enoyl-CoA hydratase related protein weak similarity to known proteinFunction: Fatty acid biosynthesis (path 2)%2C Fatty acid metabolism%2C Valine%2C leucine and isoleucine degradation%2C Lysine degradation%2C Tryptophan metabolism%2C beta-Alanine metabolism%2C Propanoate metabolism%2C Butanoate metabolism. gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0228 Ta0228 232636 233475 + conserved hypothetical protein similarity to unknown protein: USF protein homolog - Sulfolobus solfataricus%3B PIR:S73082 gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0407 Ta0407 434336 434860 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein TM0646 - Thermotoga maritima (strain MSB8)%3B PIR:E72351 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0918 Ta0918 987729 988562 - conserved hypothetical membrane protein weak similarity to known protein gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0586 Ta0586 615097 615906 + conserved hypothetical membrane protein weak similarity to unknown protein gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1163 Ta1163 1235046 1236569 - lysyl-tRNA synthetase (lysS) related protein similarity to known protein: LYSYL-TRNA SYNTHETASE (EC 6.1.1.6) (LYSINE--TRNA LIGASE) (LYSRS) - Methanococcus maripaludis%3B SWISSPROT:SYK_METMP gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0817 Ta0817 873865 874371 - hypothetical protein weak similarity to known protein. Relation: weak similarity to acetyltransferase - Pseudomonas aeruginosa%2C PIR:JQ0299. ORF_prediction: genomic region similar to Aeropyrum. gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1316 Ta1316 1363914 1364900 - alcohol dehydrogenase related protein similarity to known protein: alcohol dehydrogenase (EC 1.1.1.1)%2C thermostable - Bacillus stearothermophilus (strain NCIMB 12403)%3B PIR:S45605 gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1096 Ta1096 1166005 1167471 + probable glycerol kinase strong similarity to known protein: GLYCEROL KINASE (EC 2.7.1.30) (ATP:GLYCEROL 3-PHOSPHOTRANSFERASE)(GLYCEROKINASE) (GK) - Thermus aquaticus (subsp. flavus)%3B SWISSPROT:GLPK_THEFL gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1255 Ta1255 1315327 1315863 - probable 50S ribosomal protein L6 strong similarity to known protein: ribosomal protein L6 - Methanococcus vannielii%3B PIR:R5MX6 gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0142 Ta0142 138974 140665 - amino acid transporter related protein similarity to known protein: Bacillus subtilis gamma-aminobutyrate permease (gabP) gene and spore coatprotein (cotA) gene%2C partial cds%3B TREMBL:BS31756_2 gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0749 Ta0749 792849 793601 + sorbitol dehydrogenase related protein similarity to known protein: starvation-sensing protein rspB (EC 1.1.1.-) - Escherichia coli%3B PIR:I81185Function: Fructose and mannose metabolism. gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0350 Ta0350 372410 373072 + conserved hypothetical protein similarity to unknown protein: hypothetical protein APE1894 - Aeropyrum pernix (strain K1)%3B PIR:F72576 gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0377 Ta0377 402979 403416 + hypothetical protein no similarity gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0953 Ta0953 1022147 1023553 + transcriptional regulator%2C gvpD related protein similarity to known protein: gas vesicle protein gvpD [imported] - Halobacterium salinarum%3B PIR:S28139 gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1213 Ta1213 1281745 1283187 - purine-cytosine permease related protein similarity to known protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0343 Ta0343 365816 366739 + nucleotide sugar epimerase related protein similarity to known protein: Vibrio vulnificus nucleotide sugar epimerase gene%2C complete cds%3B TREMBL:AF059755_1 gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1242 Ta1242 1305781 1307205 + probable amidophosphoribosyltransferase strong similarity to known protein: amidophosphoribosyltransferase (EC 2.4.2.14) 2 precursor - Arabidopsis thaliana%3B PIR:T05294Function: Involved in glutamate metabolism. gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0242 Ta0242 250221 251711 - probable histidine ammonia-lyase strong similarity to known protein: HISTIDINE AMMONIA-LYASE (EC 4.3.1.3) (HISTIDASE).HISTIDINE AMMONIA-LYASE (EC 4.3.1.3) (HISTIDASE) - Pseudomonas putida.Pseudomonas putida%3B SWISSPROT:HUTH_PSEPU gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0321 Ta0321 341652 342314 - conserved hypothetical protein similarity to unknown protein: endonuclease III - Aquifex aeolicus%3B PIR:D70316. Relation: weak similarity to A/G-specific adenine glycosylase (EC 3.2.2.-) - Escherichia coli%2C PIR2:B38535. gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0562 Ta0562 593826 594404 + conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein MTH986 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:A69232 gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0685 Ta0685 721955 723013 + hypothetical protein weak similarity to known protein gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0105 Ta0105 99493 100278 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Deinococcus radiodurans (strain R1)%3B PIR:G75350 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1201 Ta1201 1271766 1272521 - conserved hypothetical protein strong similarity to unknown protein: probable 3-isopropylmalate dehydratase - Archaeoglobus fulgidus%3B PIR:E69315 gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1293 Ta1293 1344005 1344751 + RNase PH (yeast SIK6) related protein similarity to known protein: probable membrane protein YGR195w - yeast (Saccharomyces cerevisiae)%3B PIR2:S59180 gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0181 Ta0181 183805 184134 - ammonium transporter related protein similarity to known protein: Azospirillum brasilense ammonium transporter AmtB (amtB) gene%2C completecds%3B TREMBL:AF005275_1ORF_prediction: This gene encodes a C-terminal protein fragment of a putative ammonium transporter related protein jointly formed by this ORF and the one 5' upstream. A stop codon that is not suited to encode a selenocysteine interrupts the reading frame between this ORF and the one 5' upstream.. gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1342 Ta1342 1392154 1392381 - mercuric resistance operon regulatory protein merP related protein similarity to known protein: MERCURIC TRANSPORT PROTEIN PERIPLASMIC COMPONENT PRECURSOR(PERIPLASMIC MERCURY ION BINDING PROTEIN) (MERCURY SCAVENGER PROTEIN) - Enterobacter agglomerans%2C and Enterobacter cloacae%3B SWISSPROT:MERP_ENTAG gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0979 Ta0979 1047554 1048366 - 5%2C 10-methylenetetrahydrofolate reductase related protein similarity to known protein: 5%2C 10-METHYLENETETRAHYDROFOLATE REDUCTASE (EC 1.7.99.5) - Streptomyces lividans%3B SWISSPROT:METF_STRLI gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0856 Ta0856 921429 922259 + hypothetical membrane protein no similarity gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0568 Ta0568 598063 599424 + phosphomannomutase related protein similarity to known protein: phosphomannomutase (pmm) homolog - Archaeoglobus fulgidus%3B PIR:B69307 gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0691 Ta0691 729632 731293 - acetolactate synthase%2C large chain related protein similarity to known protein: acetolactate synthase (EC 4.1.3.18) - Caulobacter crescentus%3B PIR:I40666. Relation: similarity to acetolactate synthase (EC 4.1.3.18) - Caulobacter crescentus%3B I40666. Function: Valine%2C leucine and isoleucine biosynthesis%2C Butanoate metabolism%2C C5-Branched dibasic acid metabolism%2C Pantothenate and CoA biosynthesis. gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0797 Ta0797 851747 852127 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Deinococcus radiodurans (strain R1)%3B PIR:D75292 gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0546 Ta0546 577999 578775 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1590 - Pyrococcus horikoshii%3B PIR:F71037 gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0342 Ta0342 363862 365772 + conserved hypothetical protein similarity to unknown protein. Relation: weak similarity to 1%2C 4-alpha-D-glucan glucohydrolase%2C Saccharomycopsis fibuligera%2C PIR1:A54549. gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1427 Ta1427 1475275 1475520 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0217 - Pyrococcus horikoshii%3B PIR:G71244 gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1015 Ta1015 1084675 1085811 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1224 - Pyrococcus horikoshii%3B PIR:B71066 gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1470 Ta1470 1518136 1519035 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein - Bacillus megaterium (fragment)%3B PIR:T30575 gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1084 Ta1084 1156836 1157321 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH1269 - Pyrococcus horikoshii%3B PIR:B71072 gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0285 Ta0285 302578 303660 - 3-dehyroquinate synthase related protein similarity to known protein: 3-DEHYDROQUINATE SYNTHASE (EC 4.6.1.3).3-DEHYDROQUINATE SYNTHASE (EC 4.6.1.3) - Salmonella typhimurium.Salmonella typhimurium%3B SWISSPROT:AROB_SALTY gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0844 Ta0844 910796 911581 + molybdopterin biosynthesis protein moeB related protein similarity to known protein: molybdopterin biosynthesis protein moeB - Escherichia coli%3B PIR:B32352 gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1273 Ta1273 1325142 1325966 + hypothetical membrane protein similarity to unknown protein: alkaline phosphatase homolog ybfM - Bacillus subtilis%3B PIR:G69749. Relation: similarity to various alkaline phosphatase homologs (e.g. PIR:G69749) and weak similarity to a DedA protein homolog (TREMBL:BCDEDA_1). gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1285 Ta1285 1338198 1339454 + replication factor C subunit related protein similarity to known protein: replication factor C chain RFC1 - yeast (Saccharomyces cerevisiae)%3B PIR2:S44763 gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1140 Ta1140 1211017 1211466 + N-terminal acetyltransferase related protein similarity to known protein: Homo sapiens N-terminal acetyltransferase complex ard1 subunit mRNA%2C complete cds%3B TREMBL:AF085355_1 gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1048 Ta1048 1119807 1120577 + conserved hypothetical protein weak similarity to unknown protein. Relation: weak similarity to sugar transferases. gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0927 Ta0927 997762 997965 - hypothetical protein weak similarity to known protein gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0672 Ta0672 707742 708518 + polyketide synthase chain 7 related protein similarity to known protein: polyketide synthase (EC 2.-.-.-) chain 7 - Actinomadura hibisca%3B PIR:JC5856 gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0553 Ta0553 583473 584195 + flagellin B precursor related protein similarity to unknown protein: probable flagellin B precursor - Pyrococcus horikoshii%3B PIR:H71168 gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0057 Ta0057 52438 54246 + DNA repair helicase Rad3 related protein similarity to known protein: transcription initiation factor b 85K chain RAD3 - yeast (Saccharomyces cerevisiae)%3B PIR:A23308 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1202 Ta1202 1272493 1272681 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF0526 - Archaeoglobus fulgidus%3B PIR:F69315 gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0003 Ta0003 1859 2173 + ATP synthase(subunit F) related protein similarity to known protein: ATP SYNTHASE%2C SUBUNIT F (EC 3.6.1.34) - Halobacterium volcanii (Haloferax volcanii)%3B SWISSPROT:ATPF_HALVO gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0711 Ta0711 755502 755741 - hypothetical protein no similarity gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0587 Ta0587 616042 621114 + hypothetical protein similarity to unknown protein: large helicase-related protein (lhr-2) PAB0744 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75091 gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1444 Ta1444 1492526 1493170 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein ydfE - Bacillus subtilis%3B PIR:C69780 gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0673 Ta0673 708515 709714 + hypothetical protein weak similarity to known protein. Relation: weak similarity to seryl-tRNA(Ser) selenium transferase (EC 2.9.1.1) - Escherichia coli%2C PIR:A65159. gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0108 Ta0108 101592 101945 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH1697 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:H69093 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1381 Ta1381 1427313 1428107 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF1589 - Archaeoglobus fulgidus%3B PIR:D69448 gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0526 Ta0526 554443 555270 - thiamine monophosphate kinase related protein similarity to known protein: thiamin monphosphate kinase - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:G69052 gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1365 Ta1365 1413216 1413833 - conserved hypothetical protein strong similarity to unknown protein: cell division protein (ftsJ) homolog - Archaeoglobus fulgidus%3B PIR:B69506 gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1064 Ta1064 1136806 1137468 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF2106 - Archaeoglobus fulgidus%3B PIR:B69513 gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0176 Ta0176 180634 181020 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0109 - Archaeoglobus fulgidus%3B PIR:E69263 gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1432 Ta1432 1481493 1482155 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:F72334 gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0423 Ta0423 449437 450285 - conserved hypothetical protein similarity to unknown protein: probable fdhD protein - Mycobacterium tuberculosis (strain H37RV)%3B PIR:F70926 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0549 Ta0549 579799 580782 + conserved hypothetical protein similarity to unknown protein: hypothetical protein AF1742 - Archaeoglobus fulgidus%3B PIR:E69467 gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0659 Ta0659 691551 692318 + probable precorrin-4 methylase strong similarity to known protein: Bacillus megaterium 16kb genomic sequence%2C cobalamin operon%3B TREMBL:BMAJ758_9 gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0353 Ta0353 374962 375426 + hypothetical protein weak similarity to known protein. Relation: weak similarity to MutT protein - Proteus vulgaris%2C PIR2:JT0675. Function: INVOLVED IN THE GO SYSTEM RESPONSIBLE FOR REMOVING AN OXIDATIVELY DAMAGED FORM OF GUANINE (7%2C 8-DIHYDRO-8-OXOGUANINE) FROM DNA AND THE NUCLEOTIDE POOL. gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1494 Ta1494 1548956 1549813 - conserved hypothetical membrane protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:F72219 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0903 Ta0903 972386 973102 + hypothetical membrane protein weak similarity to unknown protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0388 Ta0388 412624 413442 + hypothetical protein weak similarity to unknown protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0718 Ta0718 762122 762310 + hypothetical protein no similarity. Relation: there is a weak similarity (fa_otp 57%2C orf1266 has a fa_opt of 383) to starch phosphorylase H - potato%3B PIR:A40995%2C but not to other phosphorylases. gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1300 Ta1300 1348278 1348979 + rRNA (adenine-N6%2C N6-)-dimethyltransferase (DIM1%2C yeast) related protein similarity to known protein: rRNA (adenine-N6%2C N6-)-dimethyltransferase (EC 2.1.1.-) DIM1 - yeast (Saccharomyces cerevisiae)%3B PIR1:S47985 gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1231 Ta1231 1297259 1297849 - hypothetical protein weak similarity to known protein. Relation: similarity to sigma factor K. gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0444 Ta0444 471557 472840 + probable translation elongation factor aEF-1%2C alpha chain strong similarity to known protein: ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELONGATION FACTOR TU) (EF-TU) - Haloarcula marismortui (Halobacterium marismortui)%3B SWISSPROT:EF1A_HALMA gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0946 Ta0946 1015072 1016358 + aspartyl-tRNA synthetase related protein similarity to known protein: ASPARTYL-TRNA SYNTHETASE%2C CYTOPLASMIC (EC 6.1.1.12) (ASPARTATE--TRNALIGASE) (ASPRS) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:SYDC_YEAST gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1115 Ta1115 1184496 1184705 - probable 30S ribosomal protein S28 strong similarity to known protein: Prunus persica rps28.2 genegene: rps28.2%3B product: ribosomal protein S28%3B Prunus persica rps28.2 gene%3B TREMBL:PPE012656_1 gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1420 Ta1420 1469552 1470325 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB0865 - Pyrococcus abyssi (strain Orsay)%3B PIR:G75039 gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0208 Ta0208 209118 210473 + dihydrolipoamide dehydrogenase component (E3) related protein similarity to known protein: dihydrolipoamide dehydrogenase (EC 1.8.1.4) - Escherichia coli%3B PIR:DEECLP gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0151 Ta0151 152140 152880 + conserved hypothetical protein similarity to unknown protein: signal sequence peptidase (sec11) homolog - Archaeoglobus fulgidus%3B PIR:F69473 gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0329 Ta0329 348767 349822 + probable electron transfer flavoprotein%2C alpha subunit strong similarity to known protein: ELECTRON TRANSFER FLAVOPROTEIN ALPHA-SUBUNIT (ALPHA-ETF) (ELECTRONTRANSFER FLAVOPROTEIN LARGE SUBUNIT) (ETFLS) - Clostridium acetobutylicum%3B SWISSPROT:ETFA_CLOAB gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0882 Ta0882 949424 950629 + enolase related protein similarity to known protein: E.coli eno gene%3B TREMBL:ECENO_1 gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1144 Ta1144 1216321 1216458 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:A72392 gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0132 Ta0132 129280 129822 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein SC1C2.14c - Streptomyces coelicolor%3B PIR:T29063 gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1415 Ta1415 1464697 1465110 - conserved hypothetical protein similarity to unknown protein: hypothetical protein AF0555 - Archaeoglobus fulgidus%3B PIR:C69319 gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0986 Ta0986 1054956 1055600 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein APE2535 - Aeropyrum pernix (strain K1)%3B PIR:G72486 gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0796 Ta0796 850884 851744 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein APE1441 - Aeropyrum pernix (strain K1)%3B PIR:H72622 gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0146 Ta0146 144359 145102 + trehalose/maltose transporter%2C inner membrane protein (MalG) related protein similarity to known protein: Thermococcus litoralis trehalose/maltose transporter operon includingtrehalose/maltose binding protein (malE) and inner membrane proteins MalF(malF) and MalG (malG) genes%2C complete cds%3B TREMBL:AF012836_3 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1270 Ta1270 1322035 1322802 - probable 50S ribosomal protein L4 strong similarity to known protein: ribosomal protein L4.eR [validated] - Haloarcula marismortui%3B PIR:R5HS6H gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1139 Ta1139 1210463 1210891 - Aut related protein similarity to known protein: aut protein - Alcaligenes eutrophus%3B PIR:I39548Function: The aerobic facultative chemoautotroph Alcaligenes eutrophus was found to possess a novel gene%2C designated aut%2C required for both lithoautotrophic (hydrogen plus carbon dioxide) and organoautotrophic (formate) growth (Aut+ phenotype). gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0495 Ta0495 525373 526377 - threonine synthase related protein similarity to known protein: threonine synthase (EC 4.2.99.2) thrC - Bacillus subtilis%3B PIR:A25364 gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0445 Ta0445 472845 473159 + probable 30S ribosomal protein S10 strong similarity to known protein: 30S RIBOSOMAL PROTEIN S10P (HMAS10) - Haloarcula marismortui (Halobacterium marismortui)%3B SWISSPROT:RS10_HALMA gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0839 Ta0839 904183 905880 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PH0351 - Pyrococcus horikoshii%3B PIR:D71142 gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1315 Ta1315 1363301 1363936 + probable ribulose-5-phosphate 3-epimerase strong similarity to known protein: RIBULOSE-PHOSPHATE 3-EPIMERASE PRECURSOR (EC 5.1.3.1) (PENTOSE-5-PHOSPHATE 3-EPIMERASE) (PPE) (RPE) (R5P3E) - Oryza sativa (Rice)%3B SWISSPROT:RPE_ORYSA gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0238 Ta0238 245193 246425 - ATRAZINE CHLOROHYDROLASE related protein similarity to known protein: ATRAZINE CHLOROHYDROLASE (EC 3.8.1.-) - Pseudomonas sp. (strain ADP)%3B SWISSPROT:ATZA_PSESD gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0129 Ta0129 122681 127606 + amylopullulanase related protein similarity to known protein: Thermococcus hydrothermalis pullulanase (apuA) gene%2C complete cds%3B TREMBL:AF113969_1 gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0390 Ta0390 413957 417544 + probable DNA-directed RNA polymerase chain B similarity to known protein: DNA-DIRECTED RNA POLYMERASE II 135 KDA POLYPEPTIDE (EC 2.7.7.6)(RNA POLYMERASE II SUBUNIT 2) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:RPB2_ARATH gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0303 Ta0303 326741 327223 + probable phosphoribosylaminoimidazole carboxylase catalytic subunit strong similarity to known protein: - %3B SWISSPROT:PURE_SULSO gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0068 Ta0068 66184 67533 + L-2%2C 4-diaminobutyrate:2-ketoglutarate 4-aminotransferase related protein similarity to known protein: Acinetobacter baumannii DNA for L-2%2C 4-diaminobutyrate:2-ketoglutarate4-aminotransferase%2C complete cds%3B TREMBL:AB001599_1Function: Glutamate metabolism%2C Alanine and Aspartate metabolism%2C beta-Alanine metabolism%2C Propanoate metabolism%2C Butanoate metabolism. gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0273 Ta0273 287492 287869 + hypothetical protein no similarity gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0018 Ta0018 16157 16723 - hypothetical protein no similarity gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0565 Ta0565 596426 597463 - hypothetical protein similarity to unknown protein: ceramide glucosyltransferase - Synechocystis sp. (strain PCC 6803)%3B PIR:S75560Function: Sphingoglycolipid metabolism. gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0960 Ta0960 1027668 1029179 - NADH dehydrogenase%2C chain M related protein similarity to known protein: Escherichia coli NADH ubiquinone oxidoreductase subunit (nuoA) gene%2C complete cds%3B TREMBLNEW:ECNUOA_1 gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0081 Ta0081 80728 81309 + conserved hypothetical protein similarity to unknown protein: thymidylate kinase (tmk) homolog - Archaeoglobus fulgidus%3B PIR:E69257 gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1040 Ta1040 1111526 1111909 - probable 30S ribosomal protein S8 strong similarity to known protein: ribosomal protein S8.eR [validated] - Haloarcula marismortui%3B PIR:S49022 gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0454 Ta0454 482665 483213 - N-carbamoylsarcosine amidase related protein similarity to known protein: N-carbamoylsarcosine amidase (EC 3.5.1.59) - Arthrobacter sp.%3B PIR:S28969Function: N-Carbamoylsarcosine + H2O %3D Sarcosine + CO2 + NH3%3B involved in urea cycle and metabolism of amino groups. gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0107 Ta0107 101068 101598 + conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PH0343 - Pyrococcus horikoshii%3B PIR:D71141 gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1404 Ta1404 1454986 1456365 - multidrug resistance (emrA) protein related similarity to known protein: Escherichia coli multidrug resistance (emrA) gene%2C complete cds%3B TREMBL:ECEMRA_2 gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1205 Ta1205 1273639 1273920 - 50S ribosomal protein L44 related protein similarity to known protein: C.maltosa ribosomal protein L41 (LEL41) gene%2C complete cds%3B TREMBL:CMQLAG_1 gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0427 Ta0427 454627 456300 + L-ASPARAGINE PERMEASE related protein similarity to known protein: L-ASPARAGINE PERMEASE (L-ASPARAGINE TRANSPORT PROTEIN) - Salmonella typhimurium%3B SWISSPROT:ANSP_SALTY gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0494 Ta0494 525072 525404 + hypothetical protein no similarity gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1031 Ta1031 1104411 1104803 - probable 30S ribosomal protein S11 strong similarity to known protein: 30S RIBOSOMAL PROTEIN S11P (HMAS11) (HS19) - Haloarcula marismortui (Halobacterium marismortui)%3B SWISSPROT:RS11_HALMA gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0574 Ta0574 603607 604062 - probable aspartate carbamoyltransferase%2C regulatory chain strong similarity to known protein: ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN - Sulfolobus solfataricus%3B SWISSPROT:PYRI_SULSO gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1257 Ta1257 1316272 1316433 - probable 30S ribosomal protein S14 strong similarity to known protein: ribosomal protein S14 [similarity] - Haloarcula marismortui%3B PIR:S16536 gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1014 Ta1014 1084036 1084596 - probable GTP cyclohydrolase II strong similarity to known protein: 3%2C 4-dihydroxy-2-butanone-4-phoshate synthase%3B Arabidopsis thaliana ribA gene%3B TREMBL:ATAJ0053_1Function: Riboflavin metabolism. gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1230 Ta1230 1296712 1297329 + conserved hypothetical protein weak similarity to unknown protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0983 Ta0983 1051771 1052739 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0648 - Archaeoglobus fulgidus%3B PIR:H69330 gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0033 Ta0033 29357 29956 + hypothetical protein weak similarity to known protein. Relation: weak similarity to TREMBL:BTCPSF73K_1. gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1253 Ta1253 1314478 1314927 - probable 50S ribosomal protein L19 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L19E (HMAL19) (HL24) - Haloarcula marismortui (Halobacterium marismortui)%3B SWISSPROT:RL19_HALMA gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0364 Ta0364 383315 384133 + aspartate kinase related protein similarity to known protein: A.thaliana mRNA for aspartate kinase%3B TREMBL:ATAKLYS1_1 gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0349 Ta0349 370756 372249 - amino acid transport protein AAT1 related protein similarity to known protein: amino acid transport protein AAT1 - Arabidopsis thaliana%3B PIR2:S51171 gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0781 Ta0781 824921 825889 - hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:G72391 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0980 Ta0980 1048500 1050149 - thermosome%2C alpha chain known protein: THERMOSOME%2C ALPHA SUBUNIT - Thermoplasma acidophilum%3B SWISSPROT:THSA_THEAC gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0381 Ta0381 407303 407590 + conserved hypothetical protein similarity to unknown protein: probable transposase - Streptomyces coelicolor%3B PIR:T36649 gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0202 Ta0202 202376 203116 + FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC related protein similarity to known protein: FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC - Actinobacillus pleuropneumoniae (Haemophilus pleuropneumoniae)%3B SWISSPROT:AFUC_ACTPL gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0987 Ta0987 1055638 1056894 - arginine deiminase related protein similarity to known protein: Giardia intestinalis arginine deiminase gene%2C complete cds%3B TREMBL:GI49236_1 gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0736 Ta0736 777434 777745 - conserved hypothetical protein weak similarity to unknown protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0861 Ta0861 926160 927113 + heat shock protein (htpx) related protein similarity to known protein: heat shock protein htpX - Escherichia coli%3B PIR:A43659 gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1116 Ta1116 1184717 1185082 - probable 50S ribosomal protein L7 strong similarity to known protein: ribosomal protein HS6 [validated] - Haloarcula marismortui%3B PIR:R5HSS6 gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1437 Ta1437 1486669 1487628 - probable 3-methyl-2-oxobutanoate dehydrogenase chain E1-beta strong similarity to known protein: 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) (EC 1.2.4.4) chain E1-beta - Pseudomonas putida%3B PIR:DEPSEB gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1250 Ta1250 1312853 1313281 - 50S ribosomal protein L30 related protein similarity to known protein: 60S RIBOSOMAL PROTEIN L28 (L27A) (L29) (YL24) (RP62) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:RL28_YEAST gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0877 Ta0877 942465 943898 + amino acid permease related protein similarity to known protein: amino acid transporter homolog yhdG - Bacillus subtilis%3B PIR:E69825 gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0878 Ta0878 943935 944660 + ribose-5-phosphate isomerase related protein similarity to known protein: ribose-5-phosphate isomerase (EC 5.3.1.6)%2C constitutive [validated] - Escherichia coli%3B PIR:A65076 gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1089 Ta1089 1162409 1162978 + DNA-directed RNA polymerase%2C subunit E related protein similarity to known protein: DNA-directed RNA polymerase (EC 2.7.7.6) chain E [validated] - Sulfolobus acidocaldarius%3B PIR:S38658 gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1206 Ta1206 1274052 1274339 - conserved hypothetical protein strong similarity to unknown protein: hypothetical protein 3 (5S rRNA 3' region) - Desulfurococcus mobilis%3B PIR:S01070 gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0218 Ta0218 221262 222023 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0389 - Archaeoglobus fulgidus%3B PIR:E69298 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0807 Ta0807 859881 860432 + probable anthranilate synthase component II strong similarity to known protein: Pyrococcus kodakaraensis trp operon genes (trpC%2C trpD%2C trpE%2C trpG%2C trpF%2C trpB%2C trpA)%2C complete cds%3B TREMBL:AB030011_4 gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1133 Ta1133 1200408 1200920 + hypothetical protein weak similarity to unknown protein gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0035 Ta0035 30356 30871 - hypothetical protein no similarity gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1148 Ta1148 1220048 1221814 + DNA ligase related protein similarity to known protein: DNA ligase (ATP) (EC 6.5.1.1) I - African clawed frog%3B PIR:JC4852 gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0376 Ta0376 398640 402779 - lhypothetical protein weak similarity to known protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1003 Ta1003 1075303 1075695 + probable cytochrome b%2C diheme known protein: probable cytochrome b%2C diheme - Thermoplasma acidophilum%3B PIR:S34620 gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0117 Ta0117 110753 111970 + probable isocitrate dehydrogenase strong similarity to known protein: isocitrate dehydrogenase (NADP+) (EC 1.1.1.42) - Bacillus subtilis%3B PIR:I40382 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0754 Ta0754 797693 798460 + glucose 1-dehydrogenase related protein similarity to known protein: glucose 1-dehydrogenase (EC 1.1.1.47) 2 - Bacillus megaterium%3B PIR:I39853 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0510 Ta0510 539854 540432 - hypothetical membrane protein no similarity gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1263 Ta1263 1318634 1319095 + hypothetical protein no similarity gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0835 Ta0835 896914 898938 + DNA helicase related protein similarity to known protein: Pyrococcus furiosus genes for helicase and carbamate kinase-likecarbamoylphosphate synthetase%2C complete cds%3B TREMBL:AB016521_2 gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0924 Ta0924 994664 996196 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH0135 - Pyrococcus horikoshii%3B PIR:E71234 gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0764 Ta0764 805326 806105 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF1265 - Archaeoglobus fulgidus%3B PIR:H69407 gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0263 Ta0263 272307 273338 + dipeptide transport system permease protein (DPPB) related protein similarity to known protein: dipeptide ABC transporter%2C permease protein (dppB) homolog - Archaeoglobus fulgidus%3B PIR:G69470 gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1112 Ta1112 1182103 1183872 - translation initiation factor IF-2 related protein similarity to known protein: TRANSLATION INITIATION FACTOR IF-2 - Homo sapiens (Human)%3B SWISSPROT:IF2P_HUMAN gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0226 Ta0226 230680 231444 + conserved hypothetical protein similarity to unknown protein: daunorubicin resistance membrane protein (drrb) PAB1924 - Pyrococcus abyssi (strain Orsay)%3B PIR:D75108 gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0506 Ta0506 536037 537446 + thiazole biosynthesis protein Thi I related protein similarity to known protein: THIAMINE BIOSYNTHESIS PROTEIN THII.THIAMINE BIOSYNTHESIS PROTEIN THII - Salmonella typhimurium.Salmonella typhimurium%3B SWISSPROT:THII_SALTYFunction: involved in TPP-synthesis. gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1416 Ta1416 1465395 1465730 + hypothetical protein weak similarity to unknown protein gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1174 Ta1174 1245894 1246352 + hypothetical protein no similarity gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1067 Ta1067 1140118 1141263 - N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein related protein similarity to known protein: N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN(GLCNAC-PI SYNTHESIS PROTEIN) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:GPI3_YEAST gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0636 Ta0636 666864 668078 - probable DNA polymerase II (DP2)%2C subunit 1 strong similarity to known protein: subunit 2%2C complete cds%3B TREMBL:D84670_1 gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0511 Ta0511 540462 541652 - multidrug resistance protein related protein similarity to known protein: multidrug-efflux transporter blt - Bacillus subtilis%3B PIR:I39792 gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1499 Ta1499 1553467 1553778 - hypothetical protein no similarity gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0620 Ta0620 651803 653398 + amino acid transporter protein related protein similarity to known protein: aromatic amino acid transport protein aroP - Escherichia coli%3B PIR:QRECAA gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1478 Ta1478 1526544 1528154 + probable formate-tetrahydrofolate ligase strong similarity to known protein: FORMATE--TETRAHYDROFOLATE LIGASE (EC 6.3.4.3) (FORMYLTETRAHYDROFOLATESYNTHETASE) (FHS) (FTHFS) - Streptococcus mutans%3B SWISSPROT:FTHS_STRMU gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1101 Ta1101 1170699 1171244 - hypothetical membrane protein weak similarity to unknown proteinFunction: probable serine proteinase. gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0640 Ta0640 672737 674131 + hypothetical membrane protein no similarity gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0647 Ta0647 681749 681991 + hypothetical protein no similarity gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0475 Ta0475 504822 505874 + transposase related protein similarity to known protein: Anabaena sp. insertion sequence IS891 ORF%2C complete cds%3B TREMBLNEW:IS891O01_1 gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0245 Ta0245 252675 253181 + conserved hypothetical protein similarity to unknown protein: chorismate mutase (EC 5.4.99.5) chain A - Methanococcus jannaschii%3B PIR:G64330 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1131 Ta1131 1199147 1199584 + probable 30S ribosomal protein S13 strong similarity to known protein: 40s ribosomal protein s13 - fission yeast (Schizosaccharomyces pombe)%3B PIR:S26296 gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0072 Ta0072 70585 71718 + cell division protein FtsZ known protein: probable cell division protein ftsZ - Thermoplasma acidophilum%3B PIR:T37331 gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0491 Ta0491 522029 523618 - P-methyltransferase related protein similarity to known protein: Streptomyces hygroscopicus genes for P-methylase and bialaphosbiosynthesis-related unknown product%2C complete cds%3B TREMBL:SHBCPD_2 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1487 Ta1487 1538953 1539267 - hypothetical membrane protein no similarity gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0898 Ta0898 967091 967921 + methylenetetrahydrofolate dehydrogenase (NADP+) related protein similarity to known protein: C1-tetrahydrofolate synthase precursor%2C mitochondrial - yeast (Saccharomyces cerevisiae)%3B PIR:A28174 gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0143 Ta0143 140924 141877 + probable ATP-binding protein strong similarity to known protein: Actinobacillus actinomycetemcomitans putative polyamine transport operon%2C complete sequence%3B TREMBL:AF077856_1 gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0204 Ta0204 204580 205764 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein TP0612 - syphilis spirochete%3B PIR:A71303ORF_prediction: Therelated proteins much longer at its N-terminus%2C this one could maximally be elongated by 7 aa%2C sticked to prediction therefore.. gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0837 Ta0837 900183 901490 + NADH peroxidase related protein similarity to known protein: NADH peroxidase (EC 1.11.1.1) - Enterococcus faecalis%3B PIR:S18332 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0383 Ta0383 408558 409118 + hypothetical protein no similarity gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1356 Ta1356 1404635 1405660 - heme biosynthesis protein (NirJ) related protein similarity to known protein: Pseudomonas aeruginosa DNA for NirD%2C NirL%2C NirG%2C NirH%2C NirJ%2C methyltransferase%2C NirN%2C complete and partial cds%3B TREMBL:PAD475_5 gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0262 Ta0262 271930 272151 + hypothetical protein no similarity gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0358 Ta0358 378428 378748 - probable 50S ribosomal protein L12 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L12P - Sulfolobus solfataricus%3B SWISSPROT:RL12_SULSO gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1290 Ta1290 1342640 1342948 - hypothetical protein no similarity. Relation: weak similarity to NADH dehydrogenase 4 - hardbacked tick%2C PIR2:T11162. gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1264 Ta1264 1319092 1319724 + hypothetical membrane protein no similarity gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0543 Ta0543 572752 576126 + hypothetical membrane protein weak similarity to known protein gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0801 Ta0801 855042 855731 + ubiquinone/menaquinone methyltransferase related protein similarity to known protein: Pseudomonas putida o251 homolog%2C poly(hydroxyalcanoate) granule associatedprotein GA1 (GA1)%2C and poly(hydroxyalcanoate) granule associated proteinGA2 (GA2) genes%2C complete cds%3B poly(hydroxyalkanoate) synthase (phaC2)gene%2C partial cds%3B and unknown genes%3B TREMBL:AF042276_2 gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0207 Ta0207 208150 208986 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB2118 - Pyrococcus abyssi (strain Orsay)%3B PIR:C75148. Relation: weak similarity to coenzyme F420--quinone oxidoreductase (EC 1.6.5.-) 41K chain - Archaeoglobus fulgidus%2C PIR:C69276. gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0473 Ta0473 503442 504158 + peroxiredoxin related protein similarity to known protein: PEROXIREDOXIN (REHYDRIN HOMOLOG) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:REHY_ARATHFunction: thiol-specific antioxidant protein. gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1125 Ta1125 1193960 1194415 + conserved hypothetical protein weak similarity to unknown protein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0326 Ta0326 346400 347686 + fixC protein related similarity to known protein: FIXC PROTEIN - Bradyrhizobium japonicum%3B SWISSPROT:FIXC_BRAJA gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0271 Ta0271 281953 282294 + hypothetical membrane protein no similarity gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0411 Ta0411 438280 438741 + cytolysin slyA related protein similarity to known protein: cytolysin slyA - Salmonella typhimurium%3B PIR:A36874 gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0080 Ta0080 79463 80617 - cystathionine gamma-lyase related protein similarity to known protein: cystathionine gamma-lyase (EC 4.4.1.1) - rat%3B PIR:A49864Function: Methionine metabolism%2C Selenoamino acid metabolism%2C Nitrogen metabolism. gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0564 Ta0564 595053 596249 + conserved hypothetical protein similarity to unknown protein: hypothetical protein MJ0751 - Methanococcus jannaschii%3B PIR:G64393 gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1109 Ta1109 1180057 1180668 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PH1238 - Pyrococcus horikoshii%3B PIR:H71067 gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0917 Ta0917 986808 987623 - proliferating cell nuclear antigen (PCNA) related protein similarity to known protein: proliferating cell nuclear antigen [validated] - fission yeast (Schizosaccharomyces pombe)%3B PIR:WMZPET gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1074 Ta1074 1147362 1148105 - glucose-1-phosphate thymidylyltransferase related protein similarity to known protein: glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) - Xanthomonas campestris pv. campestris%3B PIR:A49906 gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0357 Ta0357 377783 378244 + thiol-specific antioxidant related protein similarity to known protein: thiol-specific antioxidant - rat%3B PIR2:A57716 gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0702 Ta0702 743496 744392 + conserved hypothetical protein weak similarity to known protein gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0338 Ta0338 358497 359321 - L-asparaginase related protein similarity to known protein: Lupinus luteus L-asparaginase mRNA%2C complete cds%3B TREMBL:AF112444_1 gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0010 Ta0010 9642 10652 + probable aminomethyltransferase strong similarity to known protein: aminomethyltransferase (EC 2.1.2.10) [validated] - Escherichia coli%3B PIR:A56689Function: Glycine%2C serine and threonine metabolism%2C One carbon pool by folate%2C Nitrogen metabolism. gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1056 Ta1056 1129309 1129569 + hypothetical protein no similarity gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0409 Ta0409 435929 436492 - hypothetical membrane protein no similarity gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1029 Ta1029 1100715 1101392 - hypothetical protein no similarity gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1498 Ta1498 1552173 1553519 + probable glutamine synthetase strong similarity to known protein: Bacillus subtilis glnR and glnA genes for GlnR protein and glutaminesynthetase%2C complete cds%3B TREMBL:BSGLNRA_2 gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0031 Ta0031 28122 28595 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0284 - Archaeoglobus fulgidus%3B PIR:D69285 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1225 Ta1225 1291045 1291809 + conserved hypothetical membrane protein similarity to unknown protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0928 Ta0928 997992 998204 - hypothetical protein no similarity gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0287 Ta0287 305672 306589 - potassium channel chain beta 2 related protein similarity to known protein: potassium channel shaker chain beta 2 - human%3B PIR:S66502 gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0598 Ta0598 629955 630506 + dCTP deaminase related protein similarity to known protein: Archaeal virus SIRV dUTPase gene%2C complete cds%3B TREMBL:AF022221_1 gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1222 Ta1222 1288292 1289506 - cytochrome b related protein similarity to known protein: cytochrome b6 homolog soxC [similarity] - Sulfolobus acidocaldarius%3B PIR:S21043. Relation: short C-terminus like eukaryotic cytochromes. gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0563 Ta0563 594471 595022 + hypothetical protein similarity to unknown protein: hypothetical protein MJ0014 - Methanococcus jannaschii%3B PIR:F64301 gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1425 Ta1425 1473120 1474019 - probable transcription termination-antitermination factor related protein similarity to known protein: probable transcription termination-antitermination factor - Pyrococcus horikoshii%3B PIR:G71217 gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term= 1136563 1136647 + tRNA-Gly Predicted Gly tRNA (Anticodon CCC) tRNA rna26 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1433 Ta1433 1482232 1483257 - probable potassium channel protein related protein similarity to known protein: probable potassium channel protein - Escherichia coli%3B PIR:A55252 gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0633 Ta0633 663210 664478 - glycerol-3-phosphate dehydrogenase related protein similarity to known protein: glycerol-3-phosphate dehydrogenase (EC 1.1.99.5) chain A%2C anaerobic [validated] - Escherichia coli%3B PIR:DEECNA gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0298 Ta0298 319020 321269 + alpha-glucosidase related protein similarity to known protein: ALPHA-GLUCOSIDASE (EC 3.2.1.20) (MALTASE).ALPHA-GLUCOSIDASE (EC 3.2.1.20) (MALTASE) - Sulfolobus solfataricus.Sulfolobus solfataricus%3B SWISSPROT:AGLU_SULSO gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0265 Ta0265 274275 275240 + probable sporulation protein (spo0KD) strong similarity to known protein: oligopeptide transport ATP-binding protein oppD - Escherichia coli%3B PIR:A64872 gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0453 Ta0453 481490 482680 + glycerate kinase related protein similarity to known protein: Methylobacterium extorquens putative glycerate kinase and pyruvate kinase(pykA) genes%2C complete cds%3B TREMBLNEW:MEU87316_4 gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term= 1279140 1279262 + 5S rRNA ( 3' end +/- 4 bp) rRNA rna32 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1279 Ta1279 1332236 1333774 + conserved hypothetical membrane protein similarity to unknown protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0318 Ta0318 339270 340241 - probable type II DNA modification enzyme (methyltransferase) similarity to known protein: site-specific DNA-methyltransferase (EC 2.1.1.-) HP0263 - Helicobacter pylori (strain 26695)%3B PIR:G64552 gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0186 Ta0186 188661 189869 + hypothetical membrane protein weak similarity to known protein. Relation: weak similarity to bicyclomycin resistance protein%2C E. coli%2C SWISSPROT:BCR_ECOLI. gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0909 Ta0909 979975 980868 + conserved hypothetical membrane protein similarity to unknown protein gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1312 Ta1312 1360882 1361112 - hypothetical protein no similarity gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0302 Ta0302 325670 326728 + sua5 related protein similarity to known protein: SUA5 protein - yeast (Saccharomyces cerevisiae)%3B PIR2:S41991 gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0490 Ta0490 521156 521989 - hypothetical protein no similarity gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0804 Ta0804 857300 858268 + anthranilate phosphoribosyltransferase related protein similarity to known protein: ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE (EC 2.4.2.18) - Bacillus stearothermophilus%3B SWISSPROT:TRPD_BACST gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0196 Ta0196 196692 197318 - death-associated protein kinase related protein similarity to known protein: DEATH-ASSOCIATED PROTEIN KINASE 1 (EC 2.7.1.-) (DAP KINASE 1).DEATH-ASSOCIATED PROTEIN KINASE 1 (EC 2.7.1.-) (DAP KINASE 1) - Homo sapiens (Human).Homo sapiens (Human)%3B SWISSPROT:DAPK_HUMAN gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1326 Ta1326 1374436 1375182 - probable dipeptide transport system%2C ATP-binding protein dppF strong similarity to known protein: probable oligopeptide transport ATP-binding protein appF - Pyrococcus horikoshii%3B PIR:F71130. Relation: strong similarity to probable oligopeptide transport ATP-binding protein AppF - Pyrococcus horikoshii%2C PIR:F71130. gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0393 Ta0393 421770 422168 + conserved hypothetical protein weak similarity to unknown protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0536 Ta0536 565681 566910 + glutamyl-tRNA reductase related protein similarity to known protein: glutamyl-tRNA reductase (EC 1.2.1.-) - Methanobacterium thermoautotrophicum (strain Marburg)%3B PIR:S51136 gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term= 562220 562317 + tRNA-Tyr Predicted Tyr tRNA (Anticodon GTA) tRNA rna12 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0573 Ta0573 602933 603610 + hypothetical protein weak similarity to unknown protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0162 Ta0162 165203 166813 + NADH oxidase related protein similarity to known protein: NADH oxidase (EC 1.-.-.-) - Thermoanaerobacter brockii%3B PIR:S35706 gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0209 Ta0209 210581 211009 - hypothetical membrane protein weak similarity to unknown protein gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1246 Ta1246 1309463 1310158 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein PAB2141 - Pyrococcus abyssi (strain Orsay)%3B PIR:G75144 gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1221 Ta1221 1288104 1288295 - hypothetical membrane protein weak similarity to known protein gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0959 Ta0959 1026262 1027671 - NADH dehydrogenase%2C chain N related protein similarity to known protein: Arabidopsis thaliana plastid ndhB gene%2C exon 1 and joined CDS%3B TREMBL:ATAJ2490_1 gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0595 Ta0595 626822 627481 - phosphoribosylamide-glycine ligase related protein similarity to known protein: phosphoribosylamine--glycine ligase (EC 6.3.4.13) [validated] - Bacillus subtilis%3B PIR:AJBSAG gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1465 Ta1465 1512802 1513896 + acyl-CoA dehydrogenase related protein similarity to known protein: ACYL-COA DEHYDROGENASE%2C SHORT-CHAIN SPECIFIC (EC 1.3.99.2)(SCAD) (BUTYRYL-COA DEHYDROGENASE) - Clostridium acetobutylicum%3B SWISSPROT:ACDS_CLOAB gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1483 Ta1483 1534617 1535543 - hypothetical membrane protein no similarity gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0356 Ta0356 376698 377699 + deoxyhypusine synthase related protein similarity to known protein: DEOXYHYPUSINE SYNTHASE (EC 1.1.1.249) (DHS).DEOXYHYPUSINE SYNTHASE (EC 1.1.1.249) (DHS) - Homo sapiens (Human).Homo sapiens (Human)%3B SWISSPROT:DHYS_HUMANFunction: Deoxyhypusine synthase catalyzes the first of two steps in the biosynthesis of hypusine%2C a modification of a specific lysine residue in the precursor of eukaryotic translation initiation factor 5A. gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0221 Ta0221 224749 225606 - PAGO protein related protein similarity to known protein: PAGO PROTEIN.PAGO PROTEIN - Salmonella typhimurium.Salmonella typhimurium%3B SWISSPROT:PAGO_SALTY gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0975 Ta0975 1041146 1042114 - DNA primase related protein similarity to known protein: DNA primase chain p48 - human%3B PIR:S45630 gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0312 Ta0312 334289 334801 + probable dCMP deaminase strong similarity to known protein: Yeast (S.cerevisiae) dCMP deaminase gene (DCD1)%2C complete cds%3B TREMBL:SCDCD1_1 gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0437 Ta0437 462976 464139 + arsenite translocating ATPase (ASNA1) related protein similarity to known protein: probable arsenical pump-driving ATPase (EC 3.6.1.-) H1450 - Halobacterium sp. (strain NRC-1) plasmid pNRC100%3B PIR:T08340 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1353 Ta1353 1402388 1402849 + conserved hypothetical protein strong similarity to unknown protein gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0464 Ta0464 492186 493151 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PH0274 - Pyrococcus horikoshii%3B PIR:C71452 gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0916 Ta0916 986457 986735 + hypothetical protein no similarity gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0244 Ta0244 252180 252518 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:F72232 gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1414 Ta1414 1464451 1464687 - conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF0556 - Archaeoglobus fulgidus%3B PIR:D69319 gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0365 Ta0365 384321 385604 + hypothetical protein weak similarity to unknown protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0076 Ta0076 74960 75874 + COBYRIC ACID SYNTHASE related protein similarity to known protein: CBIB PROTEIN - Salmonella typhimurium%3B SWISSPROT:CBIB_SALTY gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0977 Ta0977 1045632 1046663 - methionine synthase (cobalamin-independent) related protein similarity to known protein: synthase%3B Escherichia coli cobalamin-independent methionine synthase gene%2C completecds%3B TREMBLNEW:ECCDMS_1 gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0039 Ta0039 35973 36437 - hypothetical protein weak similarity to known protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0731 Ta0731 773421 773756 - conserved hypothetical protein weak similarity to unknown protein gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0629 Ta0629 660031 660933 + probable 2-ketovalerate ferredoxin oxidoreductase beta-2 chain strong similarity to known protein: KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (EC 1.-.-.-) (VOR) (2-OXOISOVALERATE OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT) - Pyrococcus furiosus%3B SWISSNEW:VORB_PYRFUFunction: Pyruvate metabolism%2C Propanoate metabolism%2C Butanoate metabolism%2C Reductive carboxylate cycle (CO2 fixation). gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1367 Ta1367 1414264 1415646 + probable adenylosuccinate synthetase strong similarity to known protein: ADENYLOSUCCINATE SYNTHETASE (EC 6.3.4.4) (IMP--ASPARTATE LIGASE)(ADSS) (AMPSASE) - Escherichia coli%3B SWISSPROT:PURA_ECOLI gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0791 Ta0791 839602 842745 - probable carbamoyl-phosphate synthase%2C large subunit strong similarity to known protein: carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5) - Bacillus caldolyticus%3B PIR:I40169 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0601 Ta0601 631855 632217 + conserved hypothetical protein strong similarity to unknown protein: conserved hypothetical protein AF0674 - Archaeoglobus fulgidus%3B PIR:B69334 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1424 Ta1424 1471775 1473118 - hypothetical protein no similarity gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0480 Ta0480 510347 511270 + ornithine cyclodeaminase related protein similarity to known protein: ornithine cyclodeaminase - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:C69066Function: L-Ornithine %3D L-Proline + NH3. gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0778 Ta0778 821734 822306 - conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF2431 - Archaeoglobus fulgidus%3B PIR:H69553 gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0474 Ta0474 504412 504825 + transposase related protein similarity to known protein: Yersinia enterocolitica insertion sequence IS1541D%2C tnp gene%3B TREMBLNEW:YEN238016_1 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0616 Ta0616 648180 648851 - probable transaldolase strong similarity to known protein: Clostridium beijerinckii glucitol transport gene system%3B TREMBL:CBAJ2527_4 gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1374 Ta1374 1420109 1420441 - hypothetical protein no similarity gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0704 Ta0704 747197 748378 - hypothetical protein weak similarity to known protein gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0219 Ta0219 222079 223536 + probable inosine-5'-monophosphate dehydrogenase strong similarity to known protein: IMP dehydrogenase (EC 1.1.1.205) - Methanococcus jannaschii%3B PIR:G64501 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0663 Ta0663 697091 697441 - hypothetical protein no similarity gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0881 Ta0881 948689 949375 + carbonate dehydratase related protein similarity to known protein: carbonate dehydratase (EC 4.2.1.1) precursor - Methanosarcina thermophila%3B PIR:A57712 gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0656 Ta0656 689158 690252 + cobalamin biosynthesis protein D related protein similarity to known protein: CBID PROTEIN - Salmonella typhimurium%3B SWISSPROT:CBID_SALTY gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0274 Ta0274 287921 288223 + hypothetical protein no similarity gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1055 Ta1055 1127184 1129109 - probable DNA gyrase%2C subunit B (gyrB) strong similarity to known protein: DNA topoisomerase chain B homolog - Haloferax sp.%3B PIR:A39135 gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0440 Ta0440 466042 466779 - probable enoyl-CoA isomerase strong similarity to known protein: E.coli paa cluster for phenylacetic acid degradation%3B TREMBL:ECPAA_9 gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term= 1168500 1168574 + tRNA-Glu Predicted Glu tRNA (Anticodon TTC) tRNA rna27 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0019 Ta0019 16973 17614 + hypothetical membrane protein weak similarity to known protein. Relation: weak similarity to TREMBL:SO22945_1. gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1248 Ta1248 1310697 1312304 - protein translocase SEC61 (secY)%2C subunit alpha related protein similarity to known protein: PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT - Rattus norvegicus (Rat)%3B SWISSPROT:S61A_RATORF_prediction: This ORF might be 51 aa longer starting with MTEAGRNNSV... The frequency of rare codons actually would not rule out the earlier start%2C however codon usage is rather moderate in this region and closely related other ORFs do start similarly from the region of the later start point%2C therefore we suggest the later start.. gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0166 Ta0166 168753 169475 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein H0562 - Halobacterium sp. (strain NRC-1) plasmid pNRC100%3B PIR:T08265 gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0396 Ta0396 422860 423420 + RIO1 protein related similarity to known protein: RIO1 protein - yeast (Saccharomyces cerevisiae)%3B PIR2:S61006 gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0547 Ta0547 578842 579303 - hypothetical protein no similarity gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0911 Ta0911 981683 982549 - conserved hypothetical protein similarity to unknown protein: hypothetical 34K protein (glnA-fdhE intergenic region) - Escherichia coli%3B PIR:S40823 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0481 Ta0481 511310 513274 - conserved hypothetical protein strong similarity to unknown protein: sorbitol-6-phosphate 2-dehydrogenase homolog yuxG - Bacillus subtilis%3B PIR:H70024 gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0893 Ta0893 961319 962536 + hypothetical protein no similarity gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1286 Ta1286 1339507 1340130 + ribosomal protein L15E known protein: ribosomal protein L15.eR - Thermoplasma acidophilum%3B PIR:JC4150 gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0808 Ta0808 860429 861142 + indole-3-glycerol-phosphate synthase related protein similarity to known protein: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) TrpC - Sulfolobus solfataricus%3B PIR:C40635 gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1284 Ta1284 1337878 1338201 + fragment of probable methionine--tRNA ligase strong similarity to known protein: methionine--tRNA ligase (EC 6.1.1.10) - Bacillus stearothermophilus%3B PIR:S16682 gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1030 Ta1030 1103595 1104410 - DNA-dependent RNA polymerase%2C subunit D related protein similarity to known protein: DNA-DIRECTED RNA POLYMERASE II 33 KDA POLYPEPTIDE (EC 2.7.7.6) (RPB3)(RPB33) (RPB31) - Homo sapiens (Human)%3B SWISSPROT:RPB3_HUMAN gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0086 Ta0086 84693 85316 - conserved hypothetical protein similarity to unknown protein: hypothetical protein homolog MJ0888 - Methanococcus jannaschii%3B PIR:H64410 gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1028 Ta1028 1099716 1100543 - hypothetical protein no similarity gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0524 Ta0524 553308 553784 + hypothetical protein no similarity gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0042 Ta0042 39438 40055 - conserved hypothetical protein similarity to unknown protein: hypothetical protein MJ1150 - Methanococcus jannaschii%3B PIR:E64443 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0858 Ta0858 923205 924116 + glycerate dehydrogenase related protein similarity to known protein: GLYCERATE DEHYDROGENASE (EC 1.1.1.29) (NADH-DEPENDENT HYDROXYPYRUVATEREDUCTASE) (HPR) (GDH) (HYDROXYPYRUVATE DEHYDROGENASE) (GLYOXYLATEREDUCTASE) (HPR-A) - Methylobacterium extorquens%3B SWISSPROT:DHGY_METEX gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0022 Ta0022 19686 20456 + hypothetical protein no similarity gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0121 Ta0121 113879 114607 + 3-HYDROXYBUTYRYL-COA DEHYDRATASE related protein similarity to known protein: 3-HYDROXYBUTYRYL-COA DEHYDRATASE (EC 4.2.1.55) (CROTONASE) - Clostridium acetobutylicum%3B SWISSPROT:CRT_CLOAB gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0070 Ta0070 68540 69022 + conserved hypothetical protein similarity to unknown protein: hypothetical protein AF1156 - Archaeoglobus fulgidus%3B PIR:C69394 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0932 Ta0932 1000550 1001323 + tRNA-pseudouridine synthase I related protein weak similarity to known protein gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1271 Ta1271 1322799 1323794 - 50S ribosomal protein L3 related protein similarity to known protein: ribosomal protein L3 [similarity] - Haloarcula marismortui%3B PIR:R5HS3L gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0047 Ta0047 45805 46539 + anaerobic sulfite reduction protein B related protein similarity to known protein: anaerobic sulfite reduction protein B - Salmonella typhimurium%3B PIR:B38453Function: potentially a sulfite reduction protein. ORF_prediction: A related proteins is more than 25 aa longer%2C this ORF possibly only 7 aa longer due to genomic organization%2C sticked to prediction.. gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1169 Ta1169 1242628 1243671 + probable high-affinity nickel-transport protein strong similarity to known protein: HYDROGENASE NICKEL INCORPORATION PROTEIN HUPN - Bradyrhizobium japonicum%3B SWISSPROT:HUPN_BRAJA gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0542 Ta0542 571128 572528 - probable D-lactate dehydrogenase strong similarity to known protein: glycolate oxidase subunit (glcD) homolog - Archaeoglobus fulgidus%3B PIR:H69350 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1352 Ta1352 1401803 1402279 - hypothetical protein weak similarity to known protein. Relation: weak similarity to members of the mutT family of proteins%2C PIR2:B38113%2C PIR2:S60111%2C SWISSPROT:AP4A_HUMAN. gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1218 Ta1218 1287006 1287536 + transcription regulator LrpA related protein similarity to known protein: Pyrococcus furiosus glutamate dehydrogenase (gdh) and transcriptionalregulator LrpA genes%2C complete cds%3B TREMBL:PYWGDH_2 gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0482 Ta0482 513381 513731 - hypothetical protein no similarity gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0363 Ta0363 382302 383318 + aspartate-semialdehyde dehydrogenase related protein similarity to known protein: Ustilgo maydis aspartate semialdehyde dehydrogenase (ASADH) mRNA%2C completecds%3B TREMBL:UM44901_1 gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1060 Ta1060 1131579 1132769 - chlorohydrolase related protein similarity to known protein: ATRAZINE CHLOROHYDROLASE (EC 3.8.1.-) - Pseudomonas sp. (strain ADP)%3B SWISSPROT:ATZA_PSESDFunction: FIRST STEP IN ATRAZINE DEGRADATION PATHWAY. gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1119 Ta1119 1187053 1187997 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein PAB2029 - Pyrococcus abyssi (strain Orsay)%3B PIR:H75166 gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0361 Ta0361 380369 380827 - probable 50S ribosomal protein L11 strong similarity to known protein: 50S RIBOSOMAL PROTEIN L11P - Sulfolobus solfataricus%3B SWISSPROT:RL11_SULSO gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0825 Ta0825 883084 884058 + glucose kinase related protein similarity to known protein: Bacillus megaterium glk gene%3B TREMBL:BMGLUCKIN_2 gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0662 Ta0662 695812 697107 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein - Thermotoga maritima (strain MSB8)%3B PIR:D72390 gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1343 Ta1343 1392449 1392985 + hypothetical membrane protein no similarity gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1480 Ta1480 1532510 1532917 - molybdopterin-synthase large subunit related protein similarity to known protein: Homo sapiens molybdopterin-synthase small and large subunit (MOCS2)bicistronic mRNA%2C complete cds%3B TREMBL:AF091871_2 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0276 Ta0276 290965 291897 - molybdenum cofactor synthesis-step 1 (MOCS1) related protein similarity to known protein: Homo sapiens mRNA for MOCS1A %26 MOCS1B proteins%2C complete CDSs%3B TREMBL:HSAJ4328_1 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0774 Ta0774 815591 816133 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein MJ0541 - Methanococcus jannaschii%3B PIR:E64367 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1254 Ta1254 1314933 1315325 - 50S ribosomal protein L32 related protein similarity to known protein: 50S RIBOSOMAL PROTEIN L32E - Sulfolobus acidocaldarius%3B SWISSPROT:RL32_SULAC gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0198 Ta0198 198696 200609 + conserved hypothetical protein similarity to unknown protein: heterodisulfide reductase%2C subunits E and D homolog - Archaeoglobus fulgidus%3B PIR:C69344. Relation: weak similarity to GLYCOLATE OXIDASE IRON-SULFUR SUBUNIT%2C Escherichia coli%2C SWISSPROT:GLCF_ECOLI. gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0153 Ta0153 153689 154366 + conserved hypothetical protein similarity to unknown protein: dolichol-p-glucose synthetase PAB1411 - Pyrococcus abyssi (strain Orsay)%3B PIR:F75058 gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0539 Ta0539 568136 568678 + conserved hypothetical protein similarity to unknown protein: hypothetical protein APE0259 - Aeropyrum pernix (strain K1)%3B PIR:D72784 gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0041 Ta0041 38857 39441 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MJ1474 [imported] - Methanococcus jannaschii%3B PIR:A64484 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0926 Ta0926 996649 997638 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein MTH1200 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:C69027 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0156 Ta0156 156095 157378 - conserved hypothetical protein similarity to unknown protein: hypothetical protein PAB0885 - Pyrococcus abyssi (strain Orsay)%3B PIR:B75044 gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1337 Ta1337 1387196 1388374 + type IV site-specific deoxyribonuclease Eco57I related protein similarity to known protein: type IV site-specific deoxyribonuclease (EC 3.1.21.-) Eco57I - Escherichia coli%3B PIR:S26426 gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0701 Ta0701 741174 742151 - conserved hypothetical protein weak similarity to known protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0466 Ta0466 493886 494791 - conserved hypothetical protein similarity to unknown protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1249 Ta1249 1312438 1312872 - ribosomal protein L15 related protein similarity to known protein: 60S RIBOSOMAL PROTEIN L28 (L27A) (L29) (YL24) (RP62) - Saccharomyces cerevisiae (Baker's yeast)%3B SWISSPROT:RL28_YEAST gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0415 Ta0415 442249 442638 - hypothetical membrane protein no similarity gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1497 Ta1497 1551749 1551907 - hypothetical protein weak similarity to known protein. Relation: strong similarity to a small part of PIR1:A41604 (1972 aa). gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0366 Ta0366 385601 386044 - hypothetical protein no similarity gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0015 Ta0015 13330 14109 - hypothetical membrane protein no similarity gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1457 Ta1457 1503813 1504220 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein homolog MJ1552 - Methanococcus jannaschii%3B PIR:G64493 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0637 Ta0637 668184 669458 - tetrahydrofolylpolyglutamate synthase related protein similarity to known protein: tetrahydrofolylpolyglutamate synthase (EC 6.3.2.17) - Lactobacillus casei%3B PIR:A35534Function: involved in folate metabolism. gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1362 Ta1362 1410981 1411409 - iron-uptake regulator related protein similarity to known protein: iron-uptake regulator - Campylobacter upsaliensis%3B PIR:JC5752 gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0025 Ta0025 22409 23425 - hypothetical protein weak similarity to known protein gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0240 Ta0240 248209 249615 + hypothetical protein weak similarity to known protein. Relation: weak similarity to FLAGELLAR BIOSYNTHETIC PROTEIN FLIP%2C Agrobacterium tumefaciens%2C SWISSPROT:FLIP_AGRTU (involved in flagellar basal-body structure). gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0900 Ta0900 968901 970199 + Na+/H+ antiporter related protein similarity to known protein: Pseudomonas aeruginosa gene for NhaP%2C complete cds%3B TREMBL:AB010827_1 gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1495 Ta1495 1549817 1550944 - geranylgeranyl reductase related protein similarity to known protein: Arabidopsis thaliana mRNA for geranylgeranyl reductase%3B TREMBL:ATGGREDU_1 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0013 Ta0013 12098 12715 + probable Fe-superoxide dismutase (sod) strong similarity to known protein: Aquifex pyrophilus Fe-superoxide dismutase (sod) gene%2C complete cds%3B TREMBL:AF152997_1 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1479 Ta1479 1528479 1529246 + probable nucleotide-binding protein strong similarity to known protein: nucleotide-binding protein - human%3B PIR:JC4010 gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0058 Ta0058 54290 54754 + N-terminal acetyltransferase complex ard1 subunit related protein similarity to known protein. Relation: similarity to N-terminal acetyltransferase complex ard1 subunit%2C Homo sapiens%2C EMBL:AF085355. gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0394 Ta0394 422225 422635 - hypothetical membrane protein no similarity gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0391 Ta0391 417541 420198 + probable DNA-directed RNA polymerase%2C chain A similarity to known protein: DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC 2.7.7.6)(VERSION 2) - Arabidopsis thaliana (Mouse-ear cress)%3B SWISSPROT:RPB0_ARATH gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0914 Ta0914 983964 985097 - conserved hypothetical membrane protein strong similarity to unknown protein: conserved hypothetical protein c0205 - Sulfolobus solfataricus%3B PIR:S74023 gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1192 Ta1192 1262721 1263227 - hypothetical GTP-binding protein weak similarity to known protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1501 Ta1501 1554747 1556273 - RNA helicase (RIG-I) related protein similarity to known protein: Homo sapiens RNA helicase (RIG-I) mRNA%2C complete cds%3B TREMBL:AF038963_1ORF_prediction: The C-Terminus may appear too short compared to related proteins%2C however%2C neither blast / fasta nor codon preference results suggest a C-terminal extension.. gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0949 Ta0949 1018969 1019661 + fibrillarin-like pre-rRNA processing protein related protein similarity to known protein: fibrillarin [validated] - human%3B PIR:A38712 gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1190 Ta1190 1261255 1261854 + probable 30S ribosomal protein S2 strong similarity to known protein: ribosomal protein S2 [validated] - Haloarcula marismortui%3B PIR:G41715 gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1057 Ta1057 1129657 1130166 + probable 50S ribosomal protein L10 strong similarity to known protein: Bos taurus ribosomal protein (QM) mRNA%2C complete cds%3B TREMBL:AF143815_1 gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0327 Ta0327 347697 347969 + conserved hypothetical protein strong similarity to unknown protein: ferredoxin - Thermotoga maritima (strain MSB8)%3B PIR:A72242 gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0604 Ta0604 636082 637611 + conserved hypothetical membrane protein similarity to unknown protein: O-antigen transporter related protein - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:A69149. Relation: weak similarity to O-antigen transporter related protein - Methanobacterium thermoautotrophicum (strain Delta H)%2C PIR:A69149. gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0359 Ta0359 378761 379705 - acidic ribosomal protein P0 related protein similarity to known protein: ACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG (L10E) (RIBOSOMAL PROTEIN L10) - Sulfolobus solfataricus%3B SWISSPROT:RLA0_SULSO gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1038 Ta1038 1110246 1111268 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0336 - Archaeoglobus fulgidus%3B PIR:H69291 gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0674 Ta0674 709702 710529 + conserved hypothetical protein weak similarity to unknown protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0669 Ta0669 702797 704071 + tryptophan synthase%2C beta chain strong similarity to known protein: TRYPTOPHAN SYNTHASE BETA CHAIN (EC 4.2.1.20).TRYPTOPHAN SYNTHASE BETA CHAIN (EC 4.2.1.20) - Sulfolobus solfataricus.Sulfolobus solfataricus%3B SWISSPROT:TRPB_SULSO gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1180 Ta1180 1251737 1252045 + hypothetical membrane protein no similarity gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1167 Ta1167 1239605 1240252 + 30S ribosomal protein S3a related protein similarity to known protein: ribosomal protein S0.e.B%2C cytosolic - yeast (Saccharomyces cerevisiae)%3B PIR:S14051 gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0508 Ta0508 538108 539220 - probable cell division protein FtsZ strong similarity to known protein: CELL DIVISION PROTEIN FTSZ HOMOLOG - Pyrococcus woesei%3B SWISSPROT:FTSZ_PYRWO gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0468 Ta0468 496445 497770 + probable seryl-tRNA synthetase strong similarity to known protein: serine--tRNA ligase (EC 6.1.1.11)%2C cytosolic - yeast (Saccharomyces cerevisiae)%3B PIR:YSBYC gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0810 Ta0810 862786 864597 - probable aldehyde ferredoxin oxidoreductase strong similarity to known protein: TUNGSTEN-CONTAINING ALDEHYDE FERREDOXIN OXIDOREDUCTASE (EC 1.2.7.-) - Pyrococcus furiosus%3B SWISSPROT:AOR_PYRFUFunction: involved in aldehyde oxidation. gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0991 Ta0991 1060155 1062080 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein aq_2146 - Aquifex aeolicus%3B PIR:B70484 gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0307 Ta0307 329093 329377 - conserved hypothetical membrane protein similarity to unknown protein: hypothetical protein MTH1439 - Methanobacterium thermoautotrophicum (strain Delta H)%3B PIR:E69058 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1473 Ta1473 1520359 1521420 + hypothetical protein weak similarity to unknown protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0608 Ta0608 639954 640385 - transcription regulator related protein similarity to known protein: Agrobacterium tumefaciens plasmid pAtR10 proline dehydrogenase (putA) andPrp (prp) genes%2C complete cds%3B TREMBL:AT39263_1 gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1141 Ta1141 1211484 1211927 - histidine triad (HIT) related protein similarity to known protein: histidine triad protein YDL125c - yeast (Saccharomyces cerevisiae)%3B PIR:B39977 gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1106 Ta1106 1177649 1178161 + conserved hypothetical protein strong similarity to unknown protein: hypothetical protein AF1020 - Archaeoglobus fulgidus%3B PIR:D69377 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1012 Ta1012 1081509 1083326 + indolepyruvate ferredoxin oxidoreductase%2C alpha subunit related protein similarity to known protein: INDOLEPYRUVATE OXIDOREDUCTASE SUBUNIT IORA (EC 1.-.-.-) (IOR)(INDOLEPYRUVATE FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT) - Pyrococcus kodakaraensis%3B SWISSPROT:IORA_PYRKO gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1476 Ta1476 1524888 1525799 + probable glutamate formiminotransferase strong similarity to known protein: glutamate formiminotransferase (EC 2.1.2.5) / formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) - pig%3B PIR:A48717Function: Histidine metabolism%2C One carbon pool by folate. gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0441 Ta0441 466996 467748 + 3-oxoacyl-[acyl-carrier-protein] reductase related protein similarity to known protein: Bacillus subtilis PlsX (plsX)%2C malonyl-CoA:Acyl carrier proteintransacylase (fabD) and 3-ketoacyl-acyl carrier protein reductase (fabG)genes%2C complete cds%2C and acyl carrier protein (acpP) gene%2C partial cds%3B TREMBL:BSU59433_3 gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0742 Ta0742 786768 787637 + hypothetical protein weak similarity to known protein. Relation: weak similarity to cardiolipin synthase - Bacillus firmus%3B TREMBL:U88888_2. gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1332 Ta1332 1381080 1382210 - probable succinyl-CoA synthetase%2C beta subunit strong similarity to known protein: succinate--CoA ligase (ADP-forming) (EC 6.2.1.5) beta chain [validated] - Thermus aquaticus%3B PIR:S15950 gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term= 1388959 1389031 + tRNA-Val Predicted Val tRNA (Anticodon CAC) tRNA rna36 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0286 Ta0286 303924 305669 + conserved hypothetical protein similarity to unknown protein: hypothetical protein SCI51.17 - Streptomyces coelicolor%3B PIR:T36880 gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term= 996290 996371 + tRNA-Ser Predicted Ser tRNA (Anticodon GCT) tRNA rna21 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1244 Ta1244 1307738 1308805 - dyskerin (nucleolar protein Nap57) related protein similarity to known protein: DYSKERIN (NUCLEOLAR PROTEIN NAP57) (CBF5 HOMOLOG).DYSKERIN (NUCLEOLAR PROTEIN NAP57) (CBF5 HOMOLOG) - Homo sapiens (Human).Homo sapiens (Human)%3B SWISSPROT:DKC1_HUMAN gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0763 Ta0763 804743 805105 + conserved hypothetical protein similarity to unknown protein: conserved hypothetical protein AF0591 - Archaeoglobus fulgidus%3B PIR:G69323 gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0790 Ta0790 838948 839541 - endonuclease III related protein similarity to known protein: endonuclease III - Thermotoga maritima (strain MSB8)%3B PIR:F72387 gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1080 Ta1080 1152580 1152912 - hypothetical protein no similarity gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0027 Ta0027 24534 25388 - alcohol dehydrogenase related protein similarity to known protein: alcohol dehydrogenase (EC 1.1.1.1) - rat%3B PIR2:JN0629 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0583 Ta0583 613257 614237 + conserved hypothetical protein similarity to unknown protein: rod shape-determining protein (mreB) homolog - Archaeoglobus fulgidus%3B PIR:D69502 gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term= 1259612 1259685 + tRNA-Arg Predicted Arg tRNA (Anticodon GCG) tRNA rna31 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0708 Ta0708 751271 751639 + hypothetical protein no similarity gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0725 Ta0725 769769 770017 - hypothetical protein weak similarity to known protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term= Ta1179 Ta1179 1250586 1251560 - homoserine dehydrogenase related protein similarity to known protein: HOMOSERINE DEHYDROGENASE (EC 1.1.1.3) (HDH) - Bacillus subtilis%3B SWISSPROT:DHOM_BACSU gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0554 Ta0554 584234 584698 + hypothetical protein similarity to unknown protein: flagella-related protein C PAB1381 - Pyrococcus abyssi (strain Orsay)%3B PIR:H75062 gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0935 Ta0935 1003856 1004533 + hypothetical membrane protein weak similarity to unknown protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0735 Ta0735 776331 777437 - hypothetical membrane protein weak similarity to unknown protein gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0862 Ta0862 927208 929277 + hypothetical membrane protein no similarity gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0374 Ta0374 395959 396444 + hypothetical protein weak similarity to known protein gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term= Ta0748 Ta0748 791839 792558 + hypothetical protein similarity to unknown protein gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=