locus-tag class description Toce_0001 PF11638 DnaA N-terminal domain Toce_0001 PF08299 Bacterial dnaA protein helix-turn-helix Toce_0001 PF00308 Bacterial dnaA protein Toce_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Toce_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Toce_0002 PF02767 DNA polymerase III beta subunit, central domain Toce_0004 PF02463 RecF/RecN/SMC N terminal domain Toce_0006 PF04025 Domain of unknown function (DUF370) Toce_0007 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0007 PF00986 DNA gyrase B subunit, carboxyl terminus Toce_0007 PF00204 DNA gyrase B Toce_0007 PF01751 Toprim domain Toce_0008 PF03989 DNA gyrase C-terminal domain, beta-propeller Toce_0008 PF00521 DNA gyrase/topoisomerase IV, subunit A Toce_0010 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Toce_0010 PF01276 Orn/Lys/Arg decarboxylase, major domain Toce_0011 PF02223 Thymidylate kinase Toce_0012 PF06153 Cyclic-di-AMP receptor Toce_0014 PF09115 DNA polymerase III, delta subunit, C terminal Toce_0015 PF04468 PSP1 C-terminal conserved region Toce_0016 PF04298 Putative neutral zinc metallopeptidase Toce_0017 PF00701 Dihydrodipicolinate synthetase family Toce_0018 PF01430 Hsp33 protein Toce_0019 PF01522 Polysaccharide deacetylase Toce_0019 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain Toce_0020 PF02581 Thiamine monophosphate synthase Toce_0021 PF08543 Phosphomethylpyrimidine kinase Toce_0021 PF02581 Thiamine monophosphate synthase Toce_0022 PF01636 Phosphotransferase enzyme family Toce_0023 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Toce_0024 PF03807 NADP oxidoreductase coenzyme F420-dependent Toce_0024 PF14748 Pyrroline-5-carboxylate reductase dimerisation Toce_0025 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Toce_0025 PF18277 AbrB C-terminal domain Toce_0028 PF09334 tRNA synthetases class I (M) Toce_0028 PF00133 tRNA synthetases class I (I, L, M and V) Toce_0028 PF01588 Putative tRNA binding domain Toce_0029 PF01026 TatD related DNase Toce_0031 PF00398 Ribosomal RNA adenine dimethylase Toce_0032 PF04308 Ribonuclease H-like Toce_0033 PF00535 Glycosyl transferase family 2 Toce_0034 PF05582 YabG peptidase U57 Toce_0035 PF08486 Stage II sporulation protein Toce_0036 PF06257 Biofilm formation stimulator VEG Toce_0040 PF01476 LysM domain Toce_0041 PF03575 Peptidase family S51 Toce_0043 PF00288 GHMP kinases N terminal domain Toce_0043 PF08544 GHMP kinases C terminal Toce_0044 PF07729 FCD domain Toce_0044 PF00392 Bacterial regulatory proteins, gntR family Toce_0046 PF00156 Phosphoribosyl transferase domain Toce_0046 PF09182 Bacterial purine repressor, N-terminal Toce_0047 PF04026 SpoVG Toce_0048 PF12804 MobA-like NTP transferase domain Toce_0048 PF00132 Bacterial transferase hexapeptide (six repeats) Toce_0049 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Toce_0049 PF14572 Phosphoribosyl synthetase-associated domain Toce_0050 PF01386 Ribosomal L25p family Toce_0050 PF14693 Ribosomal protein TL5, C-terminal domain Toce_0051 PF01195 Peptidyl-tRNA hydrolase Toce_0054 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Toce_0054 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Toce_0054 PF00874 PRD domain Toce_0054 PF05043 Mga helix-turn-helix domain Toce_0054 PF08279 HTH domain Toce_0055 PF08125 Mannitol dehydrogenase C-terminal domain Toce_0055 PF01232 Mannitol dehydrogenase Rossmann domain Toce_0059 PF01381 Helix-turn-helix Toce_0060 PF00085 Thioredoxin Toce_0061 PF01297 Zinc-uptake complex component A periplasmic Toce_0062 PF00005 ABC transporter Toce_0063 PF00950 ABC 3 transport family Toce_0064 PF01475 Ferric uptake regulator family Toce_0065 PF17099 Tryptophan transporter TrpP Toce_0066 PF01479 S4 domain Toce_0066 PF17774 Putative RNA-binding domain in YlmH Toce_0074 PF01867 CRISPR associated protein Cas1 Toce_0075 PF09827 CRISPR associated protein Cas2 Toce_0084 PF04143 Sulphur transport Toce_0086 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Toce_0086 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0086 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_0087 PF00581 Rhodanese-like domain Toce_0088 PF09335 SNARE associated Golgi protein Toce_0090 PF13416 Bacterial extracellular solute-binding protein Toce_0091 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0093 PF00005 ABC transporter Toce_0093 PF08402 TOBE domain Toce_0096 PF14579 Helix-hairpin-helix motif Toce_0096 PF02811 PHP domain Toce_0096 PF07733 Bacterial DNA polymerase III alpha NTPase domain Toce_0096 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Toce_0099 PF03461 TRCF domain Toce_0099 PF00271 Helicase conserved C-terminal domain Toce_0099 PF17757 UvrB interaction domain Toce_0099 PF02559 CarD-like/TRCF domain Toce_0099 PF00270 DEAD/DEAH box helicase Toce_0100 PF15714 Stage V sporulation protein T C-terminal, transcription factor Toce_0100 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin Toce_0101 PF01293 Phosphoenolpyruvate carboxykinase Toce_0102 PF14667 Polysaccharide biosynthesis C-terminal domain Toce_0102 PF01943 Polysaccharide biosynthesis protein Toce_0103 PF03819 MazG nucleotide pyrophosphohydrolase domain Toce_0104 PF00216 Bacterial DNA-binding protein Toce_0105 PF08486 Stage II sporulation protein Toce_0109 PF00575 S1 RNA binding domain Toce_0110 PF02541 Ppx/GppA phosphatase family Toce_0112 PF04997 RNA polymerase Rpb1, domain 1 Toce_0112 PF00623 RNA polymerase Rpb1, domain 2 Toce_0112 PF04983 RNA polymerase Rpb1, domain 3 Toce_0112 PF05000 RNA polymerase Rpb1, domain 4 Toce_0112 PF04998 RNA polymerase Rpb1, domain 5 Toce_0113 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Toce_0114 PF00164 Ribosomal protein S12/S23 Toce_0115 PF00177 Ribosomal protein S7p/S5e Toce_0116 PF00679 Elongation factor G C-terminus Toce_0116 PF14492 Elongation Factor G, domain II Toce_0116 PF03764 Elongation factor G, domain IV Toce_0116 PF00009 Elongation factor Tu GTP binding domain Toce_0116 PF03144 Elongation factor Tu domain 2 Toce_0117 PF00009 Elongation factor Tu GTP binding domain Toce_0117 PF03144 Elongation factor Tu domain 2 Toce_0117 PF03143 Elongation factor Tu C-terminal domain Toce_0118 PF00338 Ribosomal protein S10p/S20e Toce_0119 PF00297 Ribosomal protein L3 Toce_0120 PF00573 Ribosomal protein L4/L1 family Toce_0121 PF00276 Ribosomal protein L23 Toce_0122 PF03947 Ribosomal Proteins L2, C-terminal domain Toce_0122 PF00181 Ribosomal Proteins L2, RNA binding domain Toce_0124 PF00237 Ribosomal protein L22p/L17e Toce_0125 PF07650 KH domain Toce_0125 PF00189 Ribosomal protein S3, C-terminal domain Toce_0126 PF00252 Ribosomal protein L16p/L10e Toce_0127 PF00831 Ribosomal L29 protein Toce_0128 PF00366 Ribosomal protein S17 Toce_0130 PF00467 KOW motif Toce_0130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Toce_0131 PF00673 ribosomal L5P family C-terminus Toce_0131 PF00281 Ribosomal protein L5 Toce_0132 PF00253 Ribosomal protein S14p/S29e Toce_0133 PF00410 Ribosomal protein S8 Toce_0134 PF00347 Ribosomal protein L6 Toce_0135 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Toce_0136 PF03719 Ribosomal protein S5, C-terminal domain Toce_0136 PF00333 Ribosomal protein S5, N-terminal domain Toce_0137 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Toce_0138 PF00344 SecY translocase Toce_0139 PF05191 Adenylate kinase, active site lid Toce_0140 PF00557 Metallopeptidase family M24 Toce_0142 PF01176 Translation initiation factor 1A / IF-1 Toce_0143 PF00444 Ribosomal protein L36 Toce_0144 PF00416 Ribosomal protein S13/S18 Toce_0145 PF00411 Ribosomal protein S11 Toce_0146 PF01479 S4 domain Toce_0146 PF00163 Ribosomal protein S4/S9 N-terminal domain Toce_0148 PF01196 Ribosomal protein L17 Toce_0149 PF00005 ABC transporter Toce_0150 PF00005 ABC transporter Toce_0151 PF02361 Cobalt transport protein Toce_0153 PF00572 Ribosomal protein L13 Toce_0154 PF00380 Ribosomal protein S9/S16 Toce_0155 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_0156 PF00764 Arginosuccinate synthase Toce_0157 PF14698 Argininosuccinate lyase C-terminal Toce_0157 PF00206 Lyase Toce_0158 PF02277 Phosphoribosyltransferase Toce_0160 PF05525 Branched-chain amino acid transport protein Toce_0161 PF05525 Branched-chain amino acid transport protein Toce_0162 PF01545 Cation efflux family Toce_0162 PF16916 Dimerisation domain of Zinc Transporter Toce_0164 PF00152 tRNA synthetases class II (D, K and N) Toce_0164 PF01336 OB-fold nucleic acid binding domain Toce_0165 PF11606 Family 31 carbohydrate binding protein Toce_0169 PF02421 Ferrous iron transport protein B Toce_0169 PF07664 Ferrous iron transport protein B C terminus Toce_0169 PF07670 Nucleoside recognition Toce_0170 PF07664 Ferrous iron transport protein B C terminus Toce_0170 PF17910 FeoB cytosolic helical domain Toce_0170 PF02421 Ferrous iron transport protein B Toce_0170 PF07670 Nucleoside recognition Toce_0172 PF04023 FeoA domain Toce_0173 PF00586 AIR synthase related protein, N-terminal domain Toce_0173 PF02769 AIR synthase related protein, C-terminal domain Toce_0176 PF02403 Seryl-tRNA synthetase N-terminal domain Toce_0176 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Toce_0180 PF10997 Alternate to MurJ Toce_0183 PF01022 Bacterial regulatory protein, arsR family Toce_0185 PF02374 Anion-transporting ATPase Toce_0186 PF02374 Anion-transporting ATPase Toce_0188 PF02796 Helix-turn-helix domain of resolvase Toce_0188 PF00665 Integrase core domain Toce_0189 PF01695 IstB-like ATP binding protein Toce_0190 PF00665 Integrase core domain Toce_0190 PF13333 Integrase core domain Toce_0193 PF12849 PBP superfamily domain Toce_0194 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0195 PF12857 TOBE-like domain Toce_0195 PF00005 ABC transporter Toce_0196 PF09335 SNARE associated Golgi protein Toce_0199 PF02954 Bacterial regulatory protein, Fis family Toce_0199 PF00072 Response regulator receiver domain Toce_0199 PF00158 Sigma-54 interaction domain Toce_0200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0200 PF13426 PAS domain Toce_0200 PF13188 PAS domain Toce_0200 PF00989 PAS fold Toce_0200 PF00512 His Kinase A (phospho-acceptor) domain Toce_0201 PF07498 Rho termination factor, N-terminal domain Toce_0201 PF07497 Rho termination factor, RNA-binding domain Toce_0201 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_0203 PF07670 Nucleoside recognition Toce_0204 PF07670 Nucleoside recognition Toce_0205 PF13722 5TM C-terminal transporter carbon starvation CstA Toce_0205 PF02554 Carbon starvation protein CstA Toce_0207 PF06580 Histidine kinase Toce_0207 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0207 PF13492 GAF domain Toce_0207 PF07694 5TMR of 5TMR-LYT Toce_0208 PF00072 Response regulator receiver domain Toce_0208 PF04397 LytTr DNA-binding domain Toce_0210 PF01820 D-ala D-ala ligase N-terminus Toce_0210 PF07478 D-ala D-ala ligase C-terminus Toce_0214 PF00465 Iron-containing alcohol dehydrogenase Toce_0215 PF00753 Metallo-beta-lactamase superfamily Toce_0215 PF00258 Flavodoxin Toce_0217 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_0217 PF18267 Rubredoxin NAD+ reductase C-terminal domain Toce_0217 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Toce_0217 PF04324 BFD-like [2Fe-2S] binding domain Toce_0217 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Toce_0218 PF00301 Rubredoxin Toce_0221 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Toce_0221 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Toce_0224 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Toce_0225 PF00571 CBS domain Toce_0225 PF00005 ABC transporter Toce_0226 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0231 PF02558 Ketopantoate reductase PanE/ApbA Toce_0231 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Toce_0235 PF01790 Prolipoprotein diacylglyceryl transferase Toce_0236 PF05684 Protein of unknown function (DUF819) Toce_0239 PF00553 Cellulose binding domain Toce_0239 PF00041 Fibronectin type III domain Toce_0239 PF00704 Glycosyl hydrolases family 18 Toce_0240 PF00005 ABC transporter Toce_0240 PF00664 ABC transporter transmembrane region Toce_0242 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Toce_0242 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0242 PF00037 4Fe-4S binding domain Toce_0243 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_0243 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0243 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Toce_0246 PF01869 BadF/BadG/BcrA/BcrD ATPase family Toce_0248 PF02735 Ku70/Ku80 beta-barrel domain Toce_0249 PF01068 ATP dependent DNA ligase domain Toce_0250 PF01068 ATP dependent DNA ligase domain Toce_0251 PF04820 Tryptophan halogenase Toce_0252 PF16697 Inner membrane component of T3SS, cytoplasmic domain Toce_0253 PF01098 Cell cycle protein Toce_0254 PF00905 Penicillin binding protein transpeptidase domain Toce_0256 PF00005 ABC transporter Toce_0258 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Toce_0259 PF00730 HhH-GPD superfamily base excision DNA repair protein Toce_0260 PF00579 tRNA synthetases class I (W and Y) Toce_0264 PF08279 HTH domain Toce_0264 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Toce_0264 PF00874 PRD domain Toce_0264 PF05043 Mga helix-turn-helix domain Toce_0265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Toce_0266 PF01112 Asparaginase Toce_0267 PF02378 Phosphotransferase system, EIIC Toce_0268 PF03932 CutC family Toce_0269 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Toce_0272 PF03454 MoeA C-terminal region (domain IV) Toce_0272 PF03453 MoeA N-terminal region (domain I and II) Toce_0272 PF00994 Probable molybdopterin binding domain Toce_0273 PF00994 Probable molybdopterin binding domain Toce_0273 PF03453 MoeA N-terminal region (domain I and II) Toce_0273 PF03454 MoeA C-terminal region (domain IV) Toce_0274 PF06463 Molybdenum Cofactor Synthesis C Toce_0274 PF04055 Radical SAM superfamily Toce_0275 PF01967 MoaC family Toce_0276 PF00994 Probable molybdopterin binding domain Toce_0277 PF00166 Chaperonin 10 Kd subunit Toce_0278 PF00118 TCP-1/cpn60 chaperonin family Toce_0280 PF00665 Integrase core domain Toce_0281 PF01695 IstB-like ATP binding protein Toce_0285 PF00072 Response regulator receiver domain Toce_0285 PF00486 Transcriptional regulatory protein, C terminal Toce_0286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0286 PF00989 PAS fold Toce_0286 PF00512 His Kinase A (phospho-acceptor) domain Toce_0286 PF16736 Single Cache-like Toce_0288 PF02388 FemAB family Toce_0289 PF01168 Alanine racemase, N-terminal domain Toce_0289 PF00842 Alanine racemase, C-terminal domain Toce_0292 PF03610 PTS system fructose IIA component Toce_0292 PF00874 PRD domain Toce_0292 PF00158 Sigma-54 interaction domain Toce_0293 PF08240 Alcohol dehydrogenase GroES-like domain Toce_0293 PF00107 Zinc-binding dehydrogenase Toce_0294 PF03610 PTS system fructose IIA component Toce_0294 PF03830 PTS system sorbose subfamily IIB component Toce_0295 PF03830 PTS system sorbose subfamily IIB component Toce_0298 PF00665 Integrase core domain Toce_0299 PF01695 IstB-like ATP binding protein Toce_0300 PF03613 PTS system mannose/fructose/sorbose family IID component Toce_0301 PF04029 2-phosphosulpholactate phosphatase Toce_0304 PF01891 Cobalt uptake substrate-specific transmembrane region Toce_0306 PF02361 Cobalt transport protein Toce_0307 PF00005 ABC transporter Toce_0308 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Toce_0308 PF07685 CobB/CobQ-like glutamine amidotransferase domain Toce_0310 PF02570 Precorrin-8X methylmutase Toce_0311 PF01888 CbiD Toce_0312 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Toce_0313 PF05175 Methyltransferase small domain Toce_0314 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Toce_0315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Toce_0316 PF11760 Cobalamin synthesis G N-terminal Toce_0316 PF11761 Cobalamin biosynthesis central region Toce_0316 PF01890 Cobalamin synthesis G C-terminus Toce_0317 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Toce_0317 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Toce_0318 PF02571 Precorrin-6x reductase CbiJ/CobK Toce_0319 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Toce_0319 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Toce_0319 PF01488 Shikimate / quinate 5-dehydrogenase Toce_0320 PF03900 Porphobilinogen deaminase, C-terminal domain Toce_0320 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Toce_0321 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Toce_0322 PF00490 Delta-aminolevulinic acid dehydratase Toce_0323 PF00202 Aminotransferase class-III Toce_0324 PF01266 FAD dependent oxidoreductase Toce_0324 PF00355 Rieske [2Fe-2S] domain Toce_0326 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Toce_0327 PF01979 Amidohydrolase family Toce_0328 PF00892 EamA-like transporter family Toce_0335 PF03063 Prismane/CO dehydrogenase family Toce_0336 PF02082 Transcriptional regulator Toce_0337 PF01380 SIS domain Toce_0337 PF01418 Helix-turn-helix domain, rpiR family Toce_0338 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Toce_0339 PF02378 Phosphotransferase system, EIIC Toce_0340 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Toce_0341 PF04794 YdjC-like protein Toce_0342 PF01869 BadF/BadG/BcrA/BcrD ATPase family Toce_0343 PF03702 Anhydro-N-acetylmuramic acid kinase Toce_0344 PF13580 SIS domain Toce_0345 PF02056 Family 4 glycosyl hydrolase Toce_0345 PF11975 Family 4 glycosyl hydrolase C-terminal domain Toce_0346 PF04229 GrpB protein Toce_0346 PF13673 Acetyltransferase (GNAT) domain Toce_0350 PF00005 ABC transporter Toce_0352 PF01812 5-formyltetrahydrofolate cyclo-ligase family Toce_0353 PF00117 Glutamine amidotransferase class-I Toce_0353 PF00958 GMP synthase C terminal domain Toce_0354 PF12849 PBP superfamily domain Toce_0355 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0356 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0357 PF00005 ABC transporter Toce_0358 PF01264 Chorismate synthase Toce_0359 PF01761 3-dehydroquinate synthase Toce_0360 PF01950 Fructose-1,6-bisphosphatase Toce_0361 PF00209 Sodium:neurotransmitter symporter family Toce_0364 PF01048 Phosphorylase superfamily Toce_0365 PF00596 Class II Aldolase and Adducin N-terminal domain Toce_0369 PF07730 Histidine kinase Toce_0369 PF05384 Sensor protein DegS Toce_0369 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0370 PF00196 Bacterial regulatory proteins, luxR family Toce_0370 PF00072 Response regulator receiver domain Toce_0372 PF00072 Response regulator receiver domain Toce_0372 PF00990 Diguanylate cyclase, GGDEF domain Toce_0373 PF13538 UvrD-like helicase C-terminal domain Toce_0373 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Toce_0373 PF14490 Helix-hairpin-helix containing domain Toce_0375 PF00994 Probable molybdopterin binding domain Toce_0375 PF02464 Competence-damaged protein Toce_0376 PF01557 Fumarylacetoacetate (FAA) hydrolase family Toce_0377 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Toce_0377 PF01118 Semialdehyde dehydrogenase, NAD binding domain Toce_0378 PF07836 DmpG-like communication domain Toce_0378 PF00682 HMGL-like Toce_0383 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Toce_0383 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Toce_0385 PF01614 Bacterial transcriptional regulator Toce_0385 PF09339 IclR helix-turn-helix domain Toce_0386 PF02540 NAD synthase Toce_0387 PF00731 AIR carboxylase Toce_0388 PF01969 Protein of unknown function DUF111 Toce_0389 PF00749 tRNA synthetases class I (E and Q), catalytic domain Toce_0391 PF00392 Bacterial regulatory proteins, gntR family Toce_0392 PF00005 ABC transporter Toce_0395 PF00005 ABC transporter Toce_0396 PF00392 Bacterial regulatory proteins, gntR family Toce_0400 PF01381 Helix-turn-helix Toce_0409 PF00437 Type II/IV secretion system protein Toce_0420 PF00072 Response regulator receiver domain Toce_0420 PF01966 HD domain Toce_0432 PF04225 Opacity-associated protein A LysM-like domain Toce_0432 PF01551 Peptidase family M23 Toce_0440 PF02368 Bacterial Ig-like domain (group 2) Toce_0444 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Toce_0445 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Toce_0449 PF07685 CobB/CobQ-like glutamine amidotransferase domain Toce_0450 PF07690 Major Facilitator Superfamily Toce_0451 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Toce_0452 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Toce_0452 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Toce_0453 PF00037 4Fe-4S binding domain Toce_0453 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Toce_0454 PF17862 AAA+ lid domain Toce_0454 PF06480 FtsH Extracellular Toce_0454 PF00004 ATPase family associated with various cellular activities (AAA) Toce_0454 PF01434 Peptidase family M41 Toce_0456 PF01869 BadF/BadG/BcrA/BcrD ATPase family Toce_0459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0459 PF18698 Histidine kinase sensor domain Toce_0459 PF00512 His Kinase A (phospho-acceptor) domain Toce_0459 PF00672 HAMP domain Toce_0459 PF00989 PAS fold Toce_0460 PF00072 Response regulator receiver domain Toce_0460 PF08664 YcbB domain Toce_0461 PF03616 Sodium/glutamate symporter Toce_0463 PF11798 IMS family HHH motif Toce_0463 PF00817 impB/mucB/samB family Toce_0463 PF11799 impB/mucB/samB family C-terminal domain Toce_0465 PF03449 Transcription elongation factor, N-terminal Toce_0465 PF01272 Transcription elongation factor, GreA/GreB, C-term Toce_0466 PF01820 D-ala D-ala ligase N-terminus Toce_0466 PF07478 D-ala D-ala ligase C-terminus Toce_0467 PF02423 Ornithine cyclodeaminase/mu-crystallin family Toce_0468 PF00672 HAMP domain Toce_0468 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Toce_0468 PF17200 Single Cache domain 2 Toce_0469 PF02743 Cache domain Toce_0469 PF00672 HAMP domain Toce_0469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Toce_0470 PF01584 CheW-like domain Toce_0472 PF01339 CheB methylesterase Toce_0472 PF00072 Response regulator receiver domain Toce_0473 PF00072 Response regulator receiver domain Toce_0473 PF01966 HD domain Toce_0479 PF01142 tRNA pseudouridine synthase D (TruD) Toce_0480 PF00483 Nucleotidyl transferase Toce_0482 PF01695 IstB-like ATP binding protein Toce_0483 PF00665 Integrase core domain Toce_0485 PF05922 Peptidase inhibitor I9 Toce_0485 PF00082 Subtilase family Toce_0488 PF01061 ABC-2 type transporter Toce_0489 PF14524 Wzt C-terminal domain Toce_0489 PF00005 ABC transporter Toce_0491 PF00535 Glycosyl transferase family 2 Toce_0492 PF00535 Glycosyl transferase family 2 Toce_0493 PF00534 Glycosyl transferases group 1 Toce_0493 PF13439 Glycosyltransferase Family 4 Toce_0494 PF02397 Bacterial sugar transferase Toce_0497 PF00395 S-layer homology domain Toce_0497 PF02903 Alpha amylase, N-terminal ig-like domain Toce_0497 PF00128 Alpha amylase, catalytic domain Toce_0499 PF02706 Chain length determinant protein Toce_0500 PF13614 AAA domain Toce_0501 PF02397 Bacterial sugar transferase Toce_0502 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Toce_0502 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Toce_0502 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Toce_0503 PF00534 Glycosyl transferases group 1 Toce_0504 PF00534 Glycosyl transferases group 1 Toce_0504 PF13439 Glycosyltransferase Family 4 Toce_0505 PF13439 Glycosyltransferase Family 4 Toce_0505 PF00534 Glycosyl transferases group 1 Toce_0508 PF00534 Glycosyl transferases group 1 Toce_0509 PF13579 Glycosyl transferase 4-like domain Toce_0509 PF00534 Glycosyl transferases group 1 Toce_0510 PF16363 GDP-mannose 4,6 dehydratase Toce_0511 PF01370 NAD dependent epimerase/dehydratase family Toce_0512 PF01966 HD domain Toce_0512 PF13286 Phosphohydrolase-associated domain Toce_0515 PF00465 Iron-containing alcohol dehydrogenase Toce_0518 PF01330 RuvA N terminal domain Toce_0518 PF07499 RuvA, C-terminal domain Toce_0519 PF03576 Peptidase family S58 Toce_0520 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Toce_0524 PF18211 Csm1 subunit domain B Toce_0526 PF03787 RAMP superfamily Toce_0531 PF09620 CRISPR-associated protein (Cas_csx3) Toce_0536 PF00037 4Fe-4S binding domain Toce_0536 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0536 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Toce_0537 PF00037 4Fe-4S binding domain Toce_0537 PF02256 Iron hydrogenase small subunit Toce_0537 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Toce_0537 PF02906 Iron only hydrogenase large subunit, C-terminal domain Toce_0538 PF01592 NifU-like N terminal domain Toce_0539 PF09261 Alpha mannosidase middle domain Toce_0539 PF07748 Glycosyl hydrolases family 38 C-terminal domain Toce_0539 PF01074 Glycosyl hydrolases family 38 N-terminal domain Toce_0541 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Toce_0541 PF00874 PRD domain Toce_0541 PF05043 Mga helix-turn-helix domain Toce_0541 PF08279 HTH domain Toce_0545 PF00672 HAMP domain Toce_0545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0545 PF06580 Histidine kinase Toce_0545 PF02743 Cache domain Toce_0546 PF00072 Response regulator receiver domain Toce_0547 PF00936 BMC domain Toce_0548 PF00936 BMC domain Toce_0549 PF02286 Dehydratase large subunit Toce_0550 PF02288 Dehydratase medium subunit Toce_0551 PF02287 Dehydratase small subunit Toce_0552 PF18427 DD-reactivating factor swiveling domain Toce_0552 PF08841 Diol dehydratase reactivase ATPase-like domain Toce_0554 PF00936 BMC domain Toce_0555 PF06130 Phosphate propanoyltransferase Toce_0558 PF03319 Ethanolamine utilisation protein EutN/carboxysome Toce_0559 PF01923 Cobalamin adenosyltransferase Toce_0560 PF00171 Aldehyde dehydrogenase family Toce_0561 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Toce_0561 PF13375 RnfC Barrel sandwich hybrid domain Toce_0561 PF10531 SLBB domain Toce_0561 PF13237 4Fe-4S dicluster domain Toce_0564 PF03830 PTS system sorbose subfamily IIB component Toce_0564 PF03610 PTS system fructose IIA component Toce_0568 PF01370 NAD dependent epimerase/dehydratase family Toce_0570 PF01242 6-pyruvoyl tetrahydropterin synthase Toce_0571 PF02649 Type I GTP cyclohydrolase folE2 Toce_0572 PF00809 Pterin binding enzyme Toce_0573 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Toce_0573 PF02152 Dihydroneopterin aldolase Toce_0574 PF01522 Polysaccharide deacetylase Toce_0575 PF01451 Low molecular weight phosphotyrosine protein phosphatase Toce_0576 PF02645 Uncharacterised protein, DegV family COG1307 Toce_0580 PF00132 Bacterial transferase hexapeptide (six repeats) Toce_0583 PF01891 Cobalt uptake substrate-specific transmembrane region Toce_0583 PF13190 PDGLE domain Toce_0585 PF02361 Cobalt transport protein Toce_0586 PF00005 ABC transporter Toce_0591 PF07702 UTRA domain Toce_0591 PF00392 Bacterial regulatory proteins, gntR family Toce_0592 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Toce_0593 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Toce_0593 PF00591 Glycosyl transferase family, a/b domain Toce_0593 PF02885 Glycosyl transferase family, helical bundle domain Toce_0594 PF01676 Metalloenzyme superfamily Toce_0595 PF01048 Phosphorylase superfamily Toce_0599 PF00665 Integrase core domain Toce_0600 PF01695 IstB-like ATP binding protein Toce_0601 PF07556 Protein of unknown function (DUF1538) Toce_0602 PF07556 Protein of unknown function (DUF1538) Toce_0605 PF13537 Glutamine amidotransferase domain Toce_0605 PF00733 Asparagine synthase Toce_0607 PF13847 Methyltransferase domain Toce_0608 PF00814 Glycoprotease family Toce_0608 PF00583 Acetyltransferase (GNAT) family Toce_0610 PF03099 Biotin/lipoate A/B protein ligase family Toce_0611 PF04055 Radical SAM superfamily Toce_0612 PF08331 Domain of unknown function (DUF1730) Toce_0613 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Toce_0616 PF00877 NlpC/P60 family Toce_0616 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain Toce_0617 PF00005 ABC transporter Toce_0617 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Toce_0618 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Toce_0618 PF00005 ABC transporter Toce_0621 PF00793 DAHP synthetase I family Toce_0621 PF18152 DAHP synthase ferredoxin-like domain Toce_0622 PF01842 ACT domain Toce_0622 PF02153 Prephenate dehydrogenase Toce_0623 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Toce_0624 PF01118 Semialdehyde dehydrogenase, NAD binding domain Toce_0624 PF02774 Semialdehyde dehydrogenase, dimerisation domain Toce_0625 PF13840 ACT domain Toce_0625 PF00696 Amino acid kinase family Toce_0627 PF00375 Sodium:dicarboxylate symporter family Toce_0628 PF00578 AhpC/TSA family Toce_0629 PF02683 Cytochrome C biogenesis protein transmembrane region Toce_0633 PF01070 FMN-dependent dehydrogenase Toce_0634 PF01212 Beta-eliminating lyase Toce_0635 PF01926 50S ribosome-binding GTPase Toce_0635 PF06071 Protein of unknown function (DUF933) Toce_0637 PF00849 RNA pseudouridylate synthase Toce_0637 PF01479 S4 domain Toce_0642 PF02110 Hydroxyethylthiazole kinase family Toce_0645 PF02557 D-alanyl-D-alanine carboxypeptidase Toce_0646 PF02595 Glycerate kinase family Toce_0647 PF02447 GntP family permease Toce_0648 PF05651 Putative sugar diacid recognition Toce_0648 PF13556 PucR C-terminal helix-turn-helix domain Toce_0648 PF17853 GGDEF-like domain Toce_0649 PF13426 PAS domain Toce_0649 PF02954 Bacterial regulatory protein, Fis family Toce_0649 PF00158 Sigma-54 interaction domain Toce_0651 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Toce_0652 PF03812 2-keto-3-deoxygluconate permease Toce_0653 PF07005 Sugar-binding N-terminal domain Toce_0653 PF17042 Nucleotide-binding C-terminal domain Toce_0654 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Toce_0656 PF01425 Amidase Toce_0657 PF02637 GatB domain Toce_0657 PF02934 GatB/GatE catalytic domain Toce_0658 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Toce_0659 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0660 PF00528 Binding-protein-dependent transport system inner membrane component Toce_0660 PF12911 N-terminal TM domain of oligopeptide transport permease C Toce_0661 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Toce_0661 PF00005 ABC transporter Toce_0662 PF00005 ABC transporter Toce_0662 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Toce_0663 PF01171 PP-loop family Toce_0664 PF01212 Beta-eliminating lyase Toce_0665 PF00708 Acylphosphatase Toce_0666 PF12002 MgsA AAA+ ATPase C terminal Toce_0666 PF16193 AAA C-terminal domain Toce_0666 PF00004 ATPase family associated with various cellular activities (AAA) Toce_0669 PF01894 Uncharacterised protein family UPF0047 Toce_0671 PF00665 Integrase core domain Toce_0684 PF08264 Anticodon-binding domain of tRNA Toce_0684 PF00133 tRNA synthetases class I (I, L, M and V) Toce_0684 PF10458 Valyl tRNA synthetase tRNA binding arm Toce_0685 PF08245 Mur ligase middle domain Toce_0685 PF02875 Mur ligase family, glutamate ligase domain Toce_0687 PF02424 ApbE family Toce_0688 PF06971 Putative DNA-binding protein N-terminus Toce_0688 PF02629 CoA binding domain Toce_0694 PF01119 DNA mismatch repair protein, C-terminal domain Toce_0694 PF08676 MutL C terminal dimerisation domain Toce_0696 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0696 PF00037 4Fe-4S binding domain Toce_0696 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Toce_0697 PF00037 4Fe-4S binding domain Toce_0697 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Toce_0697 PF02256 Iron hydrogenase small subunit Toce_0697 PF02906 Iron only hydrogenase large subunit, C-terminal domain Toce_0698 PF10531 SLBB domain Toce_0698 PF13375 RnfC Barrel sandwich hybrid domain Toce_0698 PF13237 4Fe-4S dicluster domain Toce_0698 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Toce_0699 PF03116 NQR2, RnfD, RnfE family Toce_0701 PF02508 Rnf-Nqr subunit, membrane protein Toce_0702 PF02508 Rnf-Nqr subunit, membrane protein Toce_0703 PF04060 Putative Fe-S cluster Toce_0703 PF13187 4Fe-4S dicluster domain Toce_0703 PF00037 4Fe-4S binding domain Toce_0706 PF02310 B12 binding domain Toce_0706 PF02607 B12 binding domain Toce_0707 PF01208 Uroporphyrinogen decarboxylase (URO-D) Toce_0710 PF01208 Uroporphyrinogen decarboxylase (URO-D) Toce_0711 PF00291 Pyridoxal-phosphate dependent enzyme Toce_0712 PF01053 Cys/Met metabolism PLP-dependent enzyme Toce_0715 PF02683 Cytochrome C biogenesis protein transmembrane region Toce_0722 PF00403 Heavy-metal-associated domain Toce_0725 PF10710 Protein of unknown function (DUF2512) Toce_0726 PF05067 Manganese containing catalase Toce_0727 PF12652 CotJB protein Toce_0730 PF07690 Major Facilitator Superfamily Toce_0731 PF00291 Pyridoxal-phosphate dependent enzyme Toce_0732 PF00899 ThiF family Toce_0733 PF02632 BioY family Toce_0734 PF00403 Heavy-metal-associated domain Toce_0739 PF04002 RadC-like JAB domain Toce_0741 PF04085 rod shape-determining protein MreC Toce_0743 PF00905 Penicillin binding protein transpeptidase domain Toce_0743 PF03717 Penicillin-binding Protein dimerisation domain Toce_0745 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Toce_0746 PF03776 Septum formation topological specificity factor MinE Toce_0747 PF01098 Cell cycle protein Toce_0749 PF02163 Peptidase family M50 Toce_0749 PF00571 CBS domain Toce_0752 PF10150 Ribonuclease E/G family Toce_0752 PF00575 S1 RNA binding domain Toce_0757 PF07486 Cell Wall Hydrolase Toce_0757 PF01471 Putative peptidoglycan binding domain Toce_0758 PF14620 YpeB sporulation Toce_0761 PF03063 Prismane/CO dehydrogenase family Toce_0763 PF00829 Ribosomal prokaryotic L21 protein Toce_0764 PF04327 Cysteine protease Prp Toce_0765 PF01016 Ribosomal L27 protein Toce_0767 PF01018 GTP1/OBG Toce_0767 PF01926 50S ribosome-binding GTPase Toce_0767 PF09269 Domain of unknown function (DUF1967) Toce_0768 PF01467 Cytidylyltransferase-like Toce_0769 PF01966 HD domain Toce_0770 PF03816 Cell envelope-related transcriptional attenuator domain Toce_0772 PF09334 tRNA synthetases class I (M) Toce_0772 PF08264 Anticodon-binding domain of tRNA Toce_0772 PF00133 tRNA synthetases class I (I, L, M and V) Toce_0772 PF13603 Leucyl-tRNA synthetase, Domain 2 Toce_0773 PF10531 SLBB domain Toce_0774 PF03841 L-seryl-tRNA selenium transferase Toce_0774 PF12390 Selenocysteine synthase N terminal Toce_0775 PF09107 Elongation factor SelB, winged helix Toce_0775 PF00009 Elongation factor Tu GTP binding domain Toce_0775 PF09105 Elongation factor SelB, winged helix Toce_0775 PF03144 Elongation factor Tu domain 2 Toce_0775 PF09106 Elongation factor SelB, winged helix Toce_0776 PF01554 MatE Toce_0777 PF01226 Formate/nitrite transporter Toce_0779 PF06725 3D domain Toce_0779 PF03990 G5-linked-Ubiquitin-like domain Toce_0779 PF07501 G5 domain Toce_0780 PF07943 Penicillin-binding protein 5, C-terminal domain Toce_0780 PF00768 D-alanyl-D-alanine carboxypeptidase Toce_0782 PF04239 Protein of unknown function (DUF421) Toce_0786 PF02906 Iron only hydrogenase large subunit, C-terminal domain Toce_0786 PF02256 Iron hydrogenase small subunit Toce_0786 PF00037 4Fe-4S binding domain Toce_0786 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Toce_0790 PF02607 B12 binding domain Toce_0790 PF02310 B12 binding domain Toce_0793 PF02607 B12 binding domain Toce_0793 PF02310 B12 binding domain Toce_0794 PF07702 UTRA domain Toce_0794 PF00392 Bacterial regulatory proteins, gntR family Toce_0799 PF13247 4Fe-4S dicluster domain Toce_0800 PF03063 Prismane/CO dehydrogenase family Toce_0801 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Toce_0802 PF01268 Formate--tetrahydrofolate ligase Toce_0804 PF04961 Formiminotransferase-cyclodeaminase Toce_0805 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Toce_0805 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Toce_0808 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Toce_0808 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_0809 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Toce_0810 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Toce_0811 PF04060 Putative Fe-S cluster Toce_0811 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit Toce_0812 PF00809 Pterin binding enzyme Toce_0813 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit Toce_0813 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain Toce_0814 PF01597 Glycine cleavage H-protein Toce_0820 PF00270 DEAD/DEAH box helicase Toce_0820 PF09369 Domain of unknown function (DUF1998) Toce_0820 PF00271 Helicase conserved C-terminal domain Toce_0821 PF13482 RNase_H superfamily Toce_0822 PF03129 Anticodon binding domain Toce_0822 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Toce_0825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Toce_0825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Toce_0825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Toce_0825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Toce_0829 PF02954 Bacterial regulatory protein, Fis family Toce_0829 PF00989 PAS fold Toce_0829 PF00158 Sigma-54 interaction domain Toce_0830 PF01515 Phosphate acetyl/butaryl transferase Toce_0831 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Toce_0831 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Toce_0832 PF00871 Acetokinase family Toce_0841 PF02073 Thermophilic metalloprotease (M29) Toce_0843 PF13567 Domain of unknown function (DUF4131) Toce_0843 PF00753 Metallo-beta-lactamase superfamily Toce_0843 PF03772 Competence protein Toce_0845 PF07475 HPr Serine kinase C-terminal domain Toce_0845 PF02603 HPr Serine kinase N terminus Toce_0846 PF01380 SIS domain Toce_0846 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain Toce_0847 PF02811 PHP domain Toce_0848 PF01063 Amino-transferase class IV Toce_0851 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Toce_0851 PF01565 FAD binding domain Toce_0852 PF01968 Hydantoinase/oxoprolinase Toce_0852 PF05378 Hydantoinase/oxoprolinase N-terminal region Toce_0853 PF00850 Histone deacetylase domain Toce_0857 PF03448 MgtE intracellular N domain Toce_0857 PF01769 Divalent cation transporter Toce_0857 PF00571 CBS domain Toce_0858 PF03448 MgtE intracellular N domain Toce_0858 PF00571 CBS domain Toce_0858 PF01769 Divalent cation transporter Toce_0859 PF10672 S-adenosylmethionine-dependent methyltransferase Toce_0859 PF17785 PUA-like domain Toce_0860 PF06133 Control of competence regulator ComK, YlbF/YmcA Toce_0861 PF13419 Haloacid dehalogenase-like hydrolase Toce_0863 PF03668 P-loop ATPase protein family Toce_0864 PF01933 Uncharacterised protein family UPF0052 Toce_0865 PF10298 WhiA N-terminal LAGLIDADG-like domain Toce_0865 PF14527 WhiA LAGLIDADG-like domain Toce_0865 PF02650 WhiA C-terminal HTH domain Toce_0866 PF00381 PTS HPr component phosphorylation site Toce_0867 PF03061 Thioesterase superfamily Toce_0867 PF00392 Bacterial regulatory proteins, gntR family Toce_0867 PF00571 CBS domain Toce_0867 PF07085 DRTGG domain Toce_0868 PF01336 OB-fold nucleic acid binding domain Toce_0868 PF02811 PHP domain Toce_0868 PF14579 Helix-hairpin-helix motif Toce_0868 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Toce_0868 PF07733 Bacterial DNA polymerase III alpha NTPase domain Toce_0870 PF00365 Phosphofructokinase Toce_0871 PF02887 Pyruvate kinase, alpha/beta domain Toce_0871 PF00224 Pyruvate kinase, barrel domain Toce_0871 PF00391 PEP-utilising enzyme, mobile domain Toce_0873 PF01063 Amino-transferase class IV Toce_0874 PF08281 Sigma-70, region 4 Toce_0876 PF00005 ABC transporter Toce_0878 PF17969 L,D-transpeptidase C-terminal domain Toce_0878 PF03734 L,D-transpeptidase catalytic domain Toce_0879 PF07670 Nucleoside recognition Toce_0880 PF07670 Nucleoside recognition Toce_0881 PF00689 Cation transporting ATPase, C-terminus Toce_0881 PF00690 Cation transporter/ATPase, N-terminus Toce_0883 PF16193 AAA C-terminal domain Toce_0883 PF01661 Macro domain Toce_0883 PF12002 MgsA AAA+ ATPase C terminal Toce_0883 PF05496 Holliday junction DNA helicase RuvB P-loop domain Toce_0887 PF02237 Biotin protein ligase C terminal domain Toce_0887 PF03099 Biotin/lipoate A/B protein ligase family Toce_0887 PF08279 HTH domain Toce_0889 PF01113 Dihydrodipicolinate reductase, N-terminus Toce_0889 PF05173 Dihydrodipicolinate reductase, C-terminus Toce_0895 PF03772 Competence protein Toce_0895 PF00753 Metallo-beta-lactamase superfamily Toce_0898 PF01649 Ribosomal protein S20 Toce_0900 PF03418 Germination protease Toce_0903 PF00679 Elongation factor G C-terminus Toce_0903 PF06421 GTP-binding protein LepA C-terminus Toce_0903 PF03144 Elongation factor Tu domain 2 Toce_0903 PF00009 Elongation factor Tu GTP binding domain Toce_0903 PF14492 Elongation Factor G, domain II Toce_0904 PF04055 Radical SAM superfamily Toce_0904 PF06969 HemN C-terminal domain Toce_0905 PF00849 RNA pseudouridylate synthase Toce_0906 PF01628 HrcA protein C terminal domain Toce_0907 PF00118 TCP-1/cpn60 chaperonin family Toce_0908 PF01025 GrpE Toce_0909 PF00012 Hsp70 protein Toce_0912 PF04452 RNA methyltransferase Toce_0913 PF04055 Radical SAM superfamily Toce_0913 PF01938 TRAM domain Toce_0913 PF00919 Uncharacterized protein family UPF0004 Toce_0914 PF01230 HIT domain Toce_0915 PF01165 Ribosomal protein S21 Toce_0917 PF07873 YabP family Toce_0919 PF02562 PhoH-like protein Toce_0920 PF01966 HD domain Toce_0920 PF07697 7TM-HD extracellular Toce_0920 PF07698 7TM receptor with intracellular HD hydrolase Toce_0921 PF02130 Uncharacterized protein family UPF0054 Toce_0922 PF01219 Prokaryotic diacylglycerol kinase Toce_0923 PF17479 Protein of unknown function (DUF3048) C-terminal domain Toce_0923 PF11258 Protein of unknown function (DUF3048) N-terminal domain Toce_0924 PF02565 Recombination protein O C terminal Toce_0924 PF11967 Recombination protein O N terminal Toce_0926 PF08279 HTH domain Toce_0926 PF00571 CBS domain Toce_0927 PF03618 Kinase/pyrophosphorylase Toce_0928 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Toce_0928 PF02896 PEP-utilising enzyme, TIM barrel domain Toce_0928 PF00391 PEP-utilising enzyme, mobile domain Toce_0930 PF01966 HD domain Toce_0930 PF13286 Phosphohydrolase-associated domain Toce_0931 PF01807 CHC2 zinc finger Toce_0931 PF08275 DNA primase catalytic core, N-terminal domain Toce_0931 PF10410 DnaB-helicase binding domain of primase Toce_0933 PF04545 Sigma-70, region 4 Toce_0933 PF04539 Sigma-70 region 3 Toce_0933 PF03979 Sigma-70 factor, region 1.1 Toce_0933 PF00140 Sigma-70 factor, region 1.2 Toce_0933 PF04542 Sigma-70 region 2 Toce_0934 PF04816 tRNA (adenine(22)-N(1))-methyltransferase Toce_0935 PF01784 NIF3 (NGG1p interacting factor 3) Toce_0940 PF00202 Aminotransferase class-III Toce_0941 PF05193 Peptidase M16 inactive domain Toce_0942 PF05193 Peptidase M16 inactive domain Toce_0942 PF00675 Insulinase (Peptidase family M16) Toce_0943 PF02381 MraZ protein, putative antitoxin-like Toce_0944 PF01795 MraW methylase family Toce_0945 PF04977 Septum formation initiator Toce_0946 PF03717 Penicillin-binding Protein dimerisation domain Toce_0946 PF00905 Penicillin binding protein transpeptidase domain Toce_0946 PF03793 PASTA domain Toce_0947 PF02875 Mur ligase family, glutamate ligase domain Toce_0947 PF08245 Mur ligase middle domain Toce_0947 PF01225 Mur ligase family, catalytic domain Toce_0948 PF02875 Mur ligase family, glutamate ligase domain Toce_0948 PF08245 Mur ligase middle domain Toce_0948 PF01225 Mur ligase family, catalytic domain Toce_0949 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Toce_0949 PF00953 Glycosyl transferase family 4 Toce_0950 PF08245 Mur ligase middle domain Toce_0950 PF02875 Mur ligase family, glutamate ligase domain Toce_0951 PF01098 Cell cycle protein Toce_0952 PF04101 Glycosyltransferase family 28 C-terminal domain Toce_0952 PF03033 Glycosyltransferase family 28 N-terminal domain Toce_0953 PF02875 Mur ligase family, glutamate ligase domain Toce_0953 PF08245 Mur ligase middle domain Toce_0953 PF01225 Mur ligase family, catalytic domain Toce_0954 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Toce_0955 PF08478 POTRA domain, FtsQ-type Toce_0955 PF03799 Cell division protein FtsQ Toce_0956 PF05949 Bacterial protein of unknown function (DUF881) Toce_0957 PF06947 Protein of unknown function (DUF1290) Toce_0958 PF02491 SHS2 domain inserted in FTSA Toce_0959 PF00091 Tubulin/FtsZ family, GTPase domain Toce_0959 PF12327 FtsZ family, C-terminal domain Toce_0960 PF03419 Sporulation factor SpoIIGA Toce_0961 PF04545 Sigma-70, region 4 Toce_0961 PF04542 Sigma-70 region 2 Toce_0962 PF04542 Sigma-70 region 2 Toce_0962 PF04539 Sigma-70 region 3 Toce_0962 PF04545 Sigma-70, region 4 Toce_0964 PF05239 PRC-barrel domain Toce_0967 PF00486 Transcriptional regulatory protein, C terminal Toce_0967 PF00072 Response regulator receiver domain Toce_0968 PF13426 PAS domain Toce_0968 PF00512 His Kinase A (phospho-acceptor) domain Toce_0968 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_0968 PF00672 HAMP domain Toce_0969 PF00005 ABC transporter Toce_0970 PF01895 PhoU domain Toce_0973 PF14045 YIEGIA protein Toce_0978 PF01926 50S ribosome-binding GTPase Toce_0978 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Toce_0979 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Toce_0979 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Toce_0980 PF09547 Stage IV sporulation protein A (spore_IV_A) Toce_0981 PF08241 Methyltransferase domain Toce_0982 PF02899 Phage integrase, N-terminal SAM-like domain Toce_0982 PF00589 Phage integrase family Toce_0986 PF00665 Integrase core domain Toce_0987 PF01695 IstB-like ATP binding protein Toce_1004 PF01554 MatE Toce_1006 PF01168 Alanine racemase, N-terminal domain Toce_1007 PF04472 Cell division protein SepF Toce_1009 PF05103 DivIVA protein Toce_1011 PF01048 Phosphorylase superfamily Toce_1013 PF01258 Prokaryotic dksA/traR C4-type zinc finger Toce_1014 PF01252 Signal peptidase (SPase) II Toce_1015 PF01479 S4 domain Toce_1015 PF00849 RNA pseudouridylate synthase Toce_1019 PF00155 Aminotransferase class I and II Toce_1020 PF03755 YicC-like family, N-terminal region Toce_1020 PF08340 Domain of unknown function (DUF1732) Toce_1021 PF04025 Domain of unknown function (DUF370) Toce_1022 PF00625 Guanylate kinase Toce_1023 PF01192 RNA polymerase Rpb6 Toce_1024 PF02441 Flavoprotein Toce_1024 PF04127 DNA / pantothenate metabolism flavoprotein Toce_1025 PF04851 Type III restriction enzyme, res subunit Toce_1025 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Toce_1025 PF18074 Primosomal protein N C-terminal domain Toce_1025 PF17764 3′ DNA-binding domain (3′BD) Toce_1025 PF00271 Helicase conserved C-terminal domain Toce_1027 PF00551 Formyl transferase Toce_1027 PF02911 Formyl transferase, C-terminal domain Toce_1029 PF01189 16S rRNA methyltransferase RsmB/F Toce_1029 PF01029 NusB family Toce_1032 PF03793 PASTA domain Toce_1032 PF00069 Protein kinase domain Toce_1033 PF00834 Ribulose-phosphate 3 epimerase family Toce_1035 PF00830 Ribosomal L28 family Toce_1036 PF03780 Asp23 family, cell envelope-related function Toce_1037 PF13684 Dihydroxyacetone kinase family Toce_1037 PF02734 DAK2 domain Toce_1038 PF00270 DEAD/DEAH box helicase Toce_1038 PF00271 Helicase conserved C-terminal domain Toce_1038 PF17191 RecG wedge domain Toce_1039 PF00269 Small, acid-soluble spore proteins, alpha/beta type Toce_1041 PF01467 Cytidylyltransferase-like Toce_1043 PF07670 Nucleoside recognition Toce_1044 PF01734 Patatin-like phospholipase Toce_1045 PF13180 PDZ domain Toce_1045 PF05362 Lon protease (S16) C-terminal proteolytic domain Toce_1046 PF05636 HIGH Nucleotidyl Transferase Toce_1048 PF00871 Acetokinase family Toce_1052 PF02504 Fatty acid synthesis protein Toce_1053 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Toce_1053 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Toce_1054 PF02645 Uncharacterised protein, DegV family COG1307 Toce_1055 PF03060 Nitronate monooxygenase Toce_1056 PF00698 Acyl transferase domain Toce_1058 PF00550 Phosphopantetheine attachment site Toce_1059 PF02801 Beta-ketoacyl synthase, C-terminal domain Toce_1059 PF00109 Beta-ketoacyl synthase, N-terminal domain Toce_1060 PF14622 Ribonuclease-III-like Toce_1060 PF00035 Double-stranded RNA binding motif Toce_1061 PF04232 Stage V sporulation protein S (SpoVS) Toce_1062 PF02463 RecF/RecN/SMC N terminal domain Toce_1062 PF06470 SMC proteins Flexible Hinge Domain Toce_1063 PF02881 SRP54-type protein, helical bundle domain Toce_1063 PF00448 SRP54-type protein, GTPase domain Toce_1064 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Toce_1065 PF02978 Signal peptide binding domain Toce_1065 PF00448 SRP54-type protein, GTPase domain Toce_1065 PF02881 SRP54-type protein, helical bundle domain Toce_1066 PF00886 Ribosomal protein S16 Toce_1068 PF01782 RimM N-terminal domain Toce_1068 PF05239 PRC-barrel domain Toce_1069 PF01746 tRNA (Guanine-1)-methyltransferase Toce_1070 PF01245 Ribosomal protein L19 Toce_1071 PF01926 50S ribosome-binding GTPase Toce_1072 PF01351 Ribonuclease HII Toce_1073 PF02021 Uncharacterised protein family UPF0102 Toce_1076 PF05698 Bacterial trigger factor protein (TF) C-terminus Toce_1077 PF01554 MatE Toce_1078 PF02310 B12 binding domain Toce_1078 PF02607 B12 binding domain Toce_1082 PF13335 Magnesium chelatase, subunit ChlI C-terminal Toce_1082 PF01078 Magnesium chelatase, subunit ChlI Toce_1083 PF12557 Cob(I)alamin adenosyltransferase N terminal Toce_1083 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Toce_1084 PF17782 DprA winged helix domain Toce_1084 PF02481 DNA recombination-mediator protein A Toce_1085 PF01396 Topoisomerase DNA binding C4 zinc finger Toce_1085 PF01751 Toprim domain Toce_1085 PF01131 DNA topoisomerase Toce_1086 PF01134 Glucose inhibited division protein A Toce_1087 PF02899 Phage integrase, N-terminal SAM-like domain Toce_1087 PF00589 Phage integrase family Toce_1088 PF00227 Proteasome subunit Toce_1089 PF07724 AAA domain (Cdc48 subfamily) Toce_1089 PF10431 C-terminal, D2-small domain, of ClpB protein Toce_1089 PF00004 ATPase family associated with various cellular activities (AAA) Toce_1090 PF06018 CodY GAF-like domain Toce_1090 PF08222 CodY helix-turn-helix domain Toce_1092 PF00460 Flagella basal body rod protein Toce_1093 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Toce_1093 PF00460 Flagella basal body rod protein Toce_1094 PF02049 Flagellar hook-basal body complex protein FliE Toce_1095 PF08345 Flagellar M-ring protein C-terminal Toce_1095 PF01514 Secretory protein of YscJ/FliF family Toce_1096 PF14842 FliG N-terminal domain Toce_1096 PF14841 FliG middle domain Toce_1096 PF01706 FliG C-terminal domain Toce_1098 PF18269 T3SS EscN ATPase C-terminal domain Toce_1098 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_1098 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_1104 PF00460 Flagella basal body rod protein Toce_1104 PF07559 Flagellar basal body protein FlaE Toce_1104 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Toce_1106 PF01618 MotA/TolQ/ExbB proton channel family Toce_1107 PF00691 OmpA family Toce_1107 PF13677 Membrane MotB of proton-channel complex MotA/MotB Toce_1109 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Toce_1109 PF02154 Flagellar motor switch protein FliM Toce_1110 PF04509 CheC-like family Toce_1110 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Toce_1111 PF00072 Response regulator receiver domain Toce_1113 PF00813 FliP family Toce_1114 PF01313 Bacterial export proteins, family 3 Toce_1115 PF01311 Bacterial export proteins, family 1 Toce_1116 PF01312 FlhB HrpN YscU SpaS Family Toce_1117 PF00771 FHIPEP family Toce_1118 PF00448 SRP54-type protein, GTPase domain Toce_1119 PF10609 NUBPL iron-transfer P-loop NTPase Toce_1121 PF02895 Signal transducing histidine kinase, homodimeric domain Toce_1121 PF01627 Hpt domain Toce_1121 PF07194 P2 response regulator binding domain Toce_1121 PF01584 CheW-like domain Toce_1121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_1122 PF01584 CheW-like domain Toce_1123 PF04509 CheC-like family Toce_1124 PF03975 CheD chemotactic sensory transduction Toce_1125 PF04542 Sigma-70 region 2 Toce_1125 PF04539 Sigma-70 region 3 Toce_1125 PF04545 Sigma-70, region 4 Toce_1129 PF02082 Transcriptional regulator Toce_1130 PF00266 Aminotransferase class-V Toce_1131 PF01592 NifU-like N terminal domain Toce_1134 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_1134 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Toce_1136 PF01594 AI-2E family transporter Toce_1137 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Toce_1137 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Toce_1138 PF02163 Peptidase family M50 Toce_1139 PF02616 Segregation and condensation protein ScpA Toce_1140 PF04079 Segregation and condensation complex subunit ScpB Toce_1142 PF09579 Sporulation protein YtfJ (Spore_YtfJ) Toce_1144 PF00768 D-alanyl-D-alanine carboxypeptidase Toce_1144 PF07943 Penicillin-binding protein 5, C-terminal domain Toce_1145 PF13932 GidA associated domain Toce_1145 PF01134 Glucose inhibited division protein A Toce_1145 PF01134 Glucose inhibited division protein A Toce_1145 PF13932 GidA associated domain Toce_1146 PF00970 Oxidoreductase FAD-binding domain Toce_1146 PF00175 Oxidoreductase NAD-binding domain Toce_1146 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Toce_1147 PF13932 GidA associated domain Toce_1147 PF01134 Glucose inhibited division protein A Toce_1147 PF13932 GidA associated domain Toce_1147 PF01134 Glucose inhibited division protein A Toce_1148 PF00849 RNA pseudouridylate synthase Toce_1148 PF01479 S4 domain Toce_1149 PF17284 Spermidine synthase tetramerisation domain Toce_1150 PF00491 Arginase family Toce_1151 PF00005 ABC transporter Toce_1154 PF02224 Cytidylate kinase Toce_1156 PF00575 S1 RNA binding domain Toce_1156 PF02401 LytB protein Toce_1157 PF01070 FMN-dependent dehydrogenase Toce_1159 PF03705 CheR methyltransferase, all-alpha domain Toce_1159 PF01739 CheR methyltransferase, SAM binding domain Toce_1163 PF00872 Transposase, Mutator family Toce_1164 PF05343 M42 glutamyl aminopeptidase Toce_1169 PF01975 Survival protein SurE Toce_1170 PF14084 Protein of unknown function (DUF4264) Toce_1173 PF00155 Aminotransferase class I and II Toce_1181 PF00717 Peptidase S24-like Toce_1181 PF01726 LexA DNA binding domain Toce_1182 PF06838 Methionine gamma-lyase Toce_1184 PF01018 GTP1/OBG Toce_1184 PF09269 Domain of unknown function (DUF1967) Toce_1184 PF01926 50S ribosome-binding GTPase Toce_1185 PF17866 AAA lid domain Toce_1185 PF00004 ATPase family associated with various cellular activities (AAA) Toce_1186 PF17209 Hfq protein Toce_1188 PF01119 DNA mismatch repair protein, C-terminal domain Toce_1188 PF08676 MutL C terminal dimerisation domain Toce_1190 PF04055 Radical SAM superfamily Toce_1190 PF00919 Uncharacterized protein family UPF0004 Toce_1190 PF01938 TRAM domain Toce_1191 PF03167 Uracil DNA glycosylase superfamily Toce_1192 PF04294 VanW like protein Toce_1193 PF00364 Biotin-requiring enzyme Toce_1193 PF02436 Conserved carboxylase domain Toce_1193 PF00682 HMGL-like Toce_1194 PF00364 Biotin-requiring enzyme Toce_1196 PF01039 Carboxyl transferase domain Toce_1199 PF01642 Methylmalonyl-CoA mutase Toce_1199 PF02310 B12 binding domain Toce_1201 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Toce_1201 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Toce_1203 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Toce_1204 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Toce_1204 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Toce_1204 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Toce_1206 PF07733 Bacterial DNA polymerase III alpha NTPase domain Toce_1206 PF14579 Helix-hairpin-helix motif Toce_1206 PF02811 PHP domain Toce_1206 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Toce_1207 PF04232 Stage V sporulation protein S (SpoVS) Toce_1208 PF13277 YmdB-like protein Toce_1209 PF00013 KH domain Toce_1209 PF12072 Domain of unknown function (DUF3552) Toce_1209 PF01966 HD domain Toce_1211 PF00005 ABC transporter Toce_1215 PF00154 recA bacterial DNA recombination protein Toce_1218 PF18146 Damage-inducible protein CinA KH domain Toce_1218 PF02464 Competence-damaged protein Toce_1218 PF00994 Probable molybdopterin binding domain Toce_1219 PF00004 ATPase family associated with various cellular activities (AAA) Toce_1219 PF01434 Peptidase family M41 Toce_1219 PF17862 AAA+ lid domain Toce_1221 PF00919 Uncharacterized protein family UPF0004 Toce_1221 PF04055 Radical SAM superfamily Toce_1221 PF18693 TRAM domain Toce_1222 PF13464 Domain of unknown function (DUF4115) Toce_1223 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Toce_1223 PF17854 FtsK alpha domain Toce_1223 PF09397 Ftsk gamma domain Toce_1223 PF01580 FtsK/SpoIIIE family Toce_1225 PF00574 Clp protease Toce_1227 PF17770 Ribonuclease J C-terminal domain Toce_1227 PF00753 Metallo-beta-lactamase superfamily Toce_1227 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Toce_1228 PF05239 PRC-barrel domain Toce_1229 PF00692 dUTPase Toce_1230 PF01522 Polysaccharide deacetylase Toce_1231 PF00575 S1 RNA binding domain Toce_1231 PF03725 3' exoribonuclease family, domain 2 Toce_1231 PF01138 3' exoribonuclease family, domain 1 Toce_1231 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Toce_1231 PF00013 KH domain Toce_1232 PF00312 Ribosomal protein S15 Toce_1233 PF06574 FAD synthetase Toce_1233 PF01687 Riboflavin kinase Toce_1234 PF01509 TruB family pseudouridylate synthase (N terminal domain) Toce_1234 PF16198 tRNA pseudouridylate synthase B C-terminal domain Toce_1237 PF11987 Translation-initiation factor 2 Toce_1237 PF00009 Elongation factor Tu GTP binding domain Toce_1237 PF04760 Translation initiation factor IF-2, N-terminal region Toce_1238 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Toce_1239 PF04296 Protein of unknown function (DUF448) Toce_1240 PF08529 NusA N-terminal domain Toce_1240 PF00575 S1 RNA binding domain Toce_1240 PF13184 NusA-like KH domain Toce_1242 PF00929 Exonuclease Toce_1242 PF07733 Bacterial DNA polymerase III alpha NTPase domain Toce_1242 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Toce_1242 PF14579 Helix-hairpin-helix motif Toce_1242 PF02811 PHP domain Toce_1242 PF11490 DNA polymerase III polC-type N-terminus II Toce_1243 PF02308 MgtC family Toce_1244 PF00535 Glycosyl transferase family 2 Toce_1245 PF03129 Anticodon binding domain Toce_1245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Toce_1245 PF04073 Aminoacyl-tRNA editing domain Toce_1246 PF09180 Prolyl-tRNA synthetase, C-terminal Toce_1246 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Toce_1246 PF03129 Anticodon binding domain Toce_1249 PF04551 GcpE protein Toce_1250 PF02163 Peptidase family M50 Toce_1250 PF17820 PDZ domain Toce_1251 PF01594 AI-2E family transporter Toce_1253 PF01255 Putative undecaprenyl diphosphate synthase Toce_1254 PF01765 Ribosome recycling factor Toce_1255 PF00696 Amino acid kinase family Toce_1256 PF00889 Elongation factor TS Toce_1257 PF00318 Ribosomal protein S2 Toce_1258 PF01869 BadF/BadG/BcrA/BcrD ATPase family Toce_1262 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Toce_1263 PF07451 Stage V sporulation protein AD (SpoVAD) Toce_1264 PF03862 SpoVAC/SpoVAEB sporulation membrane protein Toce_1267 PF04539 Sigma-70 region 3 Toce_1267 PF04545 Sigma-70, region 4 Toce_1267 PF04542 Sigma-70 region 2 Toce_1268 PF13581 Histidine kinase-like ATPase domain Toce_1269 PF01740 STAS domain Toce_1270 PF07943 Penicillin-binding protein 5, C-terminal domain Toce_1270 PF00768 D-alanyl-D-alanine carboxypeptidase Toce_1271 PF00589 Phage integrase family Toce_1271 PF02899 Phage integrase, N-terminal SAM-like domain Toce_1272 PF01944 Stage II sporulation protein M Toce_1274 PF00293 NUDIX domain Toce_1282 PF04233 Phage Mu protein F like protein Toce_1282 PF03496 ADP-ribosyltransferase exoenzyme Toce_1289 PF02796 Helix-turn-helix domain of resolvase Toce_1289 PF00665 Integrase core domain Toce_1290 PF01695 IstB-like ATP binding protein Toce_1296 PF00665 Integrase core domain Toce_1297 PF01695 IstB-like ATP binding protein Toce_1300 PF08769 Sporulation initiation factor Spo0A C terminal Toce_1300 PF00072 Response regulator receiver domain Toce_1301 PF05580 SpoIVB peptidase S55 Toce_1301 PF17820 PDZ domain Toce_1302 PF02463 RecF/RecN/SMC N terminal domain Toce_1303 PF01316 Arginine repressor, DNA binding domain Toce_1303 PF02863 Arginine repressor, C-terminal domain Toce_1304 PF01513 ATP-NAD kinase Toce_1306 PF01479 S4 domain Toce_1306 PF01728 FtsJ-like methyltransferase Toce_1308 PF00348 Polyprenyl synthetase Toce_1309 PF02609 Exonuclease VII small subunit Toce_1311 PF01029 NusB family Toce_1314 PF03780 Asp23 family, cell envelope-related function Toce_1318 PF09546 Stage III sporulation protein AE (spore_III_AE) Toce_1319 PF06686 Stage III sporulation protein AC/AD protein family Toce_1320 PF06686 Stage III sporulation protein AC/AD protein family Toce_1324 PF09285 Elongation factor P, C-terminal Toce_1324 PF08207 Elongation factor P (EF-P) KOW-like domain Toce_1324 PF01132 Elongation factor P (EF-P) OB domain Toce_1325 PF00557 Metallopeptidase family M24 Toce_1325 PF01321 Creatinase/Prolidase N-terminal domain Toce_1326 PF01220 Dehydroquinase class II Toce_1332 PF07963 Prokaryotic N-terminal methylation motif Toce_1332 PF02501 Type II secretion system (T2SS), protein I Toce_1334 PF07963 Prokaryotic N-terminal methylation motif Toce_1334 PF08334 Type II secretion system (T2SS), protein G Toce_1335 PF00482 Type II secretion system (T2SS), protein F Toce_1336 PF00437 Type II/IV secretion system protein Toce_1338 PF04545 Sigma-70, region 4 Toce_1338 PF04542 Sigma-70 region 2 Toce_1339 PF03717 Penicillin-binding Protein dimerisation domain Toce_1339 PF03793 PASTA domain Toce_1339 PF00905 Penicillin binding protein transpeptidase domain Toce_1340 PF02618 YceG-like family Toce_1342 PF00689 Cation transporting ATPase, C-terminus Toce_1342 PF00690 Cation transporter/ATPase, N-terminus Toce_1343 PF01475 Ferric uptake regulator family Toce_1344 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1345 PF00005 ABC transporter Toce_1348 PF01040 UbiA prenyltransferase family Toce_1349 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Toce_1351 PF06949 Protein of unknown function (DUF1292) Toce_1352 PF03652 Holliday junction resolvase Toce_1353 PF00248 Aldo/keto reductase family Toce_1354 PF06135 IreB regulatory phosphoprotein Toce_1355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Toce_1355 PF01411 tRNA synthetases class II (A) Toce_1355 PF02272 DHHA1 domain Toce_1357 PF02583 Metal-sensitive transcriptional repressor Toce_1358 PF00152 tRNA synthetases class II (D, K and N) Toce_1358 PF02938 GAD domain Toce_1358 PF01336 OB-fold nucleic acid binding domain Toce_1359 PF03129 Anticodon binding domain Toce_1359 PF13393 Histidyl-tRNA synthetase Toce_1360 PF17820 PDZ domain Toce_1360 PF13180 PDZ domain Toce_1362 PF00753 Metallo-beta-lactamase superfamily Toce_1364 PF13291 ACT domain Toce_1364 PF04607 Region found in RelA / SpoT proteins Toce_1364 PF02824 TGS domain Toce_1365 PF00156 Phosphoribosyl transferase domain Toce_1366 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Toce_1366 PF17768 RecJ OB domain Toce_1366 PF02272 DHHA1 domain Toce_1366 PF01368 DHH family Toce_1368 PF17863 AAA lid domain Toce_1368 PF01078 Magnesium chelatase, subunit ChlI Toce_1370 PF02355 Protein export membrane protein Toce_1370 PF07549 SecD/SecF GG Motif Toce_1371 PF02355 Protein export membrane protein Toce_1371 PF07549 SecD/SecF GG Motif Toce_1374 PF02699 Preprotein translocase subunit Toce_1375 PF01702 Queuine tRNA-ribosyltransferase Toce_1377 PF02547 Queuosine biosynthesis protein Toce_1378 PF08486 Stage II sporulation protein Toce_1379 PF11146 Protein of unknown function (DUF2905) Toce_1380 PF17864 RuvB AAA lid domain Toce_1380 PF05491 RuvB C-terminal winged helix domain Toce_1380 PF05496 Holliday junction DNA helicase RuvB P-loop domain Toce_1381 PF07499 RuvA, C-terminal domain Toce_1381 PF01330 RuvA N terminal domain Toce_1384 PF01709 Transcriptional regulator Toce_1385 PF02540 NAD synthase Toce_1386 PF09186 Domain of unknown function (DUF1949) Toce_1386 PF01205 Uncharacterized protein family UPF0029 Toce_1387 PF07486 Cell Wall Hydrolase Toce_1387 PF01471 Putative peptidoglycan binding domain Toce_1389 PF01479 S4 domain Toce_1389 PF00579 tRNA synthetases class I (W and Y) Toce_1390 PF00905 Penicillin binding protein transpeptidase domain Toce_1390 PF00912 Transglycosylase Toce_1391 PF04463 Protein of unknown function (DUF523) Toce_1393 PF12392 Collagenase Toce_1393 PF01136 Peptidase family U32 Toce_1394 PF14716 Helix-hairpin-helix domain Toce_1394 PF02811 PHP domain Toce_1394 PF14791 DNA polymerase beta thumb Toce_1395 PF05164 Cell division protein ZapA Toce_1396 PF03483 B3/4 domain Toce_1396 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Toce_1396 PF01588 Putative tRNA binding domain Toce_1396 PF03147 Ferredoxin-fold anticodon binding domain Toce_1396 PF03484 tRNA synthetase B5 domain Toce_1397 PF01409 tRNA synthetases class II core domain (F) Toce_1397 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Toce_1398 PF08032 RNA 2'-O ribose methyltransferase substrate binding Toce_1398 PF00588 SpoU rRNA Methylase family Toce_1399 PF02080 TrkA-C domain Toce_1399 PF02254 TrkA-N domain Toce_1400 PF02080 TrkA-C domain Toce_1400 PF02254 TrkA-N domain Toce_1401 PF02386 Cation transport protein Toce_1402 PF00453 Ribosomal protein L20 Toce_1403 PF01632 Ribosomal protein L35 Toce_1404 PF05198 Translation initiation factor IF-3, N-terminal domain Toce_1404 PF00707 Translation initiation factor IF-3, C-terminal domain Toce_1405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Toce_1405 PF03129 Anticodon binding domain Toce_1405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Toce_1405 PF02824 TGS domain Toce_1407 PF04286 Protein of unknown function (DUF445) Toce_1407 PF04286 Protein of unknown function (DUF445) Toce_1410 PF00665 Integrase core domain Toce_1416 PF00155 Aminotransferase class I and II Toce_1417 PF01106 NifU-like domain Toce_1419 PF00300 Histidine phosphatase superfamily (branch 1) Toce_1420 PF02654 Cobalamin-5-phosphate synthase Toce_1421 PF03186 CobD/Cbib protein Toce_1422 PF00155 Aminotransferase class I and II Toce_1423 PF00288 GHMP kinases N terminal domain Toce_1424 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Toce_1425 PF01032 FecCD transport family Toce_1426 PF01497 Periplasmic binding protein Toce_1427 PF05524 PEP-utilising enzyme, N-terminal Toce_1427 PF00391 PEP-utilising enzyme, mobile domain Toce_1427 PF02896 PEP-utilising enzyme, TIM barrel domain Toce_1429 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_1429 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Toce_1430 PF02817 e3 binding domain Toce_1430 PF00364 Biotin-requiring enzyme Toce_1430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Toce_1431 PF02779 Transketolase, pyrimidine binding domain Toce_1431 PF02780 Transketolase, C-terminal domain Toce_1432 PF00676 Dehydrogenase E1 component Toce_1435 PF07663 Sorbitol phosphotransferase enzyme II C-terminus Toce_1435 PF03612 Sorbitol phosphotransferase enzyme II N-terminus Toce_1436 PF03608 PTS system enzyme II sorbitol-specific factor Toce_1437 PF00118 TCP-1/cpn60 chaperonin family Toce_1438 PF04198 Putative sugar-binding domain Toce_1440 PF00923 Transaldolase/Fructose-6-phosphate aldolase Toce_1441 PF00056 lactate/malate dehydrogenase, NAD binding domain Toce_1441 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Toce_1442 PF08240 Alcohol dehydrogenase GroES-like domain Toce_1442 PF00107 Zinc-binding dehydrogenase Toce_1443 PF00107 Zinc-binding dehydrogenase Toce_1443 PF08240 Alcohol dehydrogenase GroES-like domain Toce_1444 PF03611 PTS system sugar-specific permease component Toce_1446 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Toce_1447 PF03610 PTS system fructose IIA component Toce_1447 PF00874 PRD domain Toce_1447 PF00158 Sigma-54 interaction domain Toce_1448 PF02151 UvrB/uvrC motif Toce_1448 PF08459 UvrC Helix-hairpin-helix N-terminal Toce_1448 PF01541 GIY-YIG catalytic domain Toce_1448 PF12826 Helix-hairpin-helix motif Toce_1450 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Toce_1451 PF01235 Sodium:alanine symporter family Toce_1452 PF13426 PAS domain Toce_1452 PF02954 Bacterial regulatory protein, Fis family Toce_1452 PF00158 Sigma-54 interaction domain Toce_1453 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Toce_1453 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Toce_1454 PF00512 His Kinase A (phospho-acceptor) domain Toce_1454 PF00672 HAMP domain Toce_1454 PF00989 PAS fold Toce_1454 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_1454 PF18698 Histidine kinase sensor domain Toce_1455 PF00072 Response regulator receiver domain Toce_1455 PF00486 Transcriptional regulatory protein, C terminal Toce_1456 PF01522 Polysaccharide deacetylase Toce_1460 PF01895 PhoU domain Toce_1463 PF01488 Shikimate / quinate 5-dehydrogenase Toce_1463 PF08501 Shikimate dehydrogenase substrate binding domain Toce_1463 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Toce_1464 PF02926 THUMP domain Toce_1464 PF02568 Thiamine biosynthesis protein (ThiI) Toce_1465 PF00266 Aminotransferase class-V Toce_1466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Toce_1466 PF03459 TOBE domain Toce_1469 PF08331 Domain of unknown function (DUF1730) Toce_1473 PF01979 Amidohydrolase family Toce_1474 PF07837 Formiminotransferase domain, N-terminal subdomain Toce_1474 PF02971 Formiminotransferase domain Toce_1475 PF17391 Urocanase N-terminal domain Toce_1475 PF17392 Urocanase C-terminal domain Toce_1475 PF01175 Urocanase Rossmann-like domain Toce_1476 PF00221 Aromatic amino acid lyase Toce_1477 PF00474 Sodium:solute symporter family Toce_1479 PF14098 Small, acid-soluble spore protein I Toce_1480 PF01588 Putative tRNA binding domain Toce_1481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Toce_1481 PF03466 LysR substrate binding domain Toce_1482 PF03749 Sugar fermentation stimulation protein RE domain Toce_1482 PF17746 SfsA N-terminal OB domain Toce_1484 PF13941 MutL protein Toce_1485 PF02310 B12 binding domain Toce_1485 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Toce_1485 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Toce_1486 PF16552 D-ornithine 4,5-aminomutase alpha-subunit Toce_1487 PF00291 Pyridoxal-phosphate dependent enzyme Toce_1489 PF01113 Dihydrodipicolinate reductase, N-terminus Toce_1491 PF01168 Alanine racemase, N-terminal domain Toce_1492 PF13426 PAS domain Toce_1492 PF00158 Sigma-54 interaction domain Toce_1492 PF02954 Bacterial regulatory protein, Fis family Toce_1496 PF12850 Calcineurin-like phosphoesterase superfamily domain Toce_1497 PF02844 Phosphoribosylglycinamide synthetase, N domain Toce_1497 PF02843 Phosphoribosylglycinamide synthetase, C domain Toce_1497 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Toce_1498 PF02142 MGS-like domain Toce_1498 PF01808 AICARFT/IMPCHase bienzyme Toce_1499 PF00551 Formyl transferase Toce_1500 PF02769 AIR synthase related protein, C-terminal domain Toce_1500 PF00586 AIR synthase related protein, N-terminal domain Toce_1501 PF00156 Phosphoribosyl transferase domain Toce_1502 PF02769 AIR synthase related protein, C-terminal domain Toce_1502 PF00586 AIR synthase related protein, N-terminal domain Toce_1502 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Toce_1504 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Toce_1505 PF01259 SAICAR synthetase Toce_1506 PF00731 AIR carboxylase Toce_1508 PF00665 Integrase core domain Toce_1509 PF01695 IstB-like ATP binding protein Toce_1510 PF00155 Aminotransferase class I and II Toce_1511 PF10576 Iron-sulfur binding domain of endonuclease III Toce_1511 PF00633 Helix-hairpin-helix motif Toce_1511 PF00730 HhH-GPD superfamily base excision DNA repair protein Toce_1512 PF01261 Xylose isomerase-like TIM barrel Toce_1513 PF01244 Membrane dipeptidase (Peptidase family M19) Toce_1514 PF02811 PHP domain Toce_1514 PF14716 Helix-hairpin-helix domain Toce_1514 PF14791 DNA polymerase beta thumb Toce_1515 PF00881 Nitroreductase family Toce_1519 PF00440 Bacterial regulatory proteins, tetR family Toce_1520 PF00348 Polyprenyl synthetase Toce_1521 PF10776 Protein of unknown function (DUF2600) Toce_1523 PF00534 Glycosyl transferases group 1 Toce_1525 PF01368 DHH family Toce_1525 PF07085 DRTGG domain Toce_1525 PF02833 DHHA2 domain Toce_1525 PF00571 CBS domain Toce_1527 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Toce_1528 PF01471 Putative peptidoglycan binding domain Toce_1528 PF03572 Peptidase family S41 Toce_1528 PF17820 PDZ domain Toce_1529 PF03109 ABC1 family Toce_1533 PF02310 B12 binding domain Toce_1533 PF02574 Homocysteine S-methyltransferase Toce_1533 PF00809 Pterin binding enzyme Toce_1533 PF02607 B12 binding domain Toce_1533 PF02965 Vitamin B12 dependent methionine synthase, activation domain Toce_1535 PF02007 Tetrahydromethanopterin S-methyltransferase MtrH subunit Toce_1542 PF01740 STAS domain Toce_1544 PF00072 Response regulator receiver domain Toce_1548 PF00465 Iron-containing alcohol dehydrogenase Toce_1549 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Toce_1549 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_1550 PF03466 LysR substrate binding domain Toce_1550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Toce_1552 PF07732 Multicopper oxidase Toce_1552 PF00394 Multicopper oxidase Toce_1552 PF07731 Multicopper oxidase Toce_1553 PF05958 tRNA (Uracil-5-)-methyltransferase Toce_1553 PF01938 TRAM domain Toce_1554 PF00588 SpoU rRNA Methylase family Toce_1555 PF02811 PHP domain Toce_1559 PF01053 Cys/Met metabolism PLP-dependent enzyme Toce_1560 PF02954 Bacterial regulatory protein, Fis family Toce_1560 PF13426 PAS domain Toce_1560 PF00158 Sigma-54 interaction domain Toce_1562 PF00209 Sodium:neurotransmitter symporter family Toce_1565 PF01515 Phosphate acetyl/butaryl transferase Toce_1566 PF00871 Acetokinase family Toce_1567 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Toce_1567 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Toce_1568 PF02954 Bacterial regulatory protein, Fis family Toce_1568 PF00158 Sigma-54 interaction domain Toce_1568 PF00989 PAS fold Toce_1570 PF00005 ABC transporter Toce_1571 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1572 PF00497 Bacterial extracellular solute-binding proteins, family 3 Toce_1576 PF01555 DNA methylase Toce_1578 PF02561 Flagellar protein FliS Toce_1579 PF07195 Flagellar hook-associated protein 2 C-terminus Toce_1579 PF02465 Flagellar hook-associated protein 2 N-terminus Toce_1579 PF07196 Flagellin hook IN motif Toce_1584 PF00872 Transposase, Mutator family Toce_1586 PF00700 Bacterial flagellin C-terminal helical region Toce_1586 PF00669 Bacterial flagellin N-terminal helical region Toce_1587 PF13181 Tetratricopeptide repeat Toce_1587 PF00535 Glycosyl transferase family 2 Toce_1588 PF00535 Glycosyl transferase family 2 Toce_1589 PF00132 Bacterial transferase hexapeptide (six repeats) Toce_1590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Toce_1590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Toce_1591 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Toce_1591 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Toce_1591 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Toce_1592 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Toce_1593 PF02599 Global regulator protein family Toce_1594 PF02623 FliW protein Toce_1596 PF00700 Bacterial flagellin C-terminal helical region Toce_1596 PF00669 Bacterial flagellin N-terminal helical region Toce_1597 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Toce_1597 PF00460 Flagella basal body rod protein Toce_1603 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Toce_1603 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Toce_1604 PF03129 Anticodon binding domain Toce_1604 PF02824 TGS domain Toce_1604 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Toce_1604 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Toce_1606 PF04011 LemA family Toce_1607 PF16868 NMT1-like family Toce_1610 PF02659 Putative manganese efflux pump Toce_1611 PF00005 ABC transporter Toce_1612 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1615 PF02504 Fatty acid synthesis protein Toce_1616 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Toce_1617 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Toce_1618 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Toce_1619 PF04723 Glycine reductase complex selenoprotein A Toce_1620 PF04723 Glycine reductase complex selenoprotein A Toce_1621 PF09338 Glycine/sarcosine/betaine reductase component B subunits Toce_1622 PF00085 Thioredoxin Toce_1625 PF10417 C-terminal domain of 1-Cys peroxiredoxin Toce_1625 PF00578 AhpC/TSA family Toce_1626 PF00578 AhpC/TSA family Toce_1626 PF10417 C-terminal domain of 1-Cys peroxiredoxin Toce_1627 PF01022 Bacterial regulatory protein, arsR family Toce_1629 PF01695 IstB-like ATP binding protein Toce_1630 PF00665 Integrase core domain Toce_1631 PF00665 Integrase core domain Toce_1631 PF02796 Helix-turn-helix domain of resolvase Toce_1632 PF01695 IstB-like ATP binding protein Toce_1641 PF00881 Nitroreductase family Toce_1642 PF08264 Anticodon-binding domain of tRNA Toce_1642 PF00133 tRNA synthetases class I (I, L, M and V) Toce_1644 PF01861 Branched-chain polyamine synthase A C-terminal domain Toce_1645 PF00005 ABC transporter Toce_1645 PF00664 ABC transporter transmembrane region Toce_1646 PF00005 ABC transporter Toce_1646 PF00664 ABC transporter transmembrane region Toce_1647 PF02673 Bacitracin resistance protein BacA Toce_1648 PF05139 Erythromycin esterase Toce_1648 PF00156 Phosphoribosyl transferase domain Toce_1649 PF00334 Nucleoside diphosphate kinase Toce_1650 PF02581 Thiamine monophosphate synthase Toce_1651 PF10145 Phage-related minor tail protein Toce_1651 PF01464 Transglycosylase SLT domain Toce_1651 PF01551 Peptidase family M23 Toce_1652 PF01121 Dephospho-CoA kinase Toce_1653 PF01367 5'-3' exonuclease, C-terminal SAM fold Toce_1653 PF00476 DNA polymerase family A Toce_1653 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Toce_1654 PF01381 Helix-turn-helix Toce_1659 PF03734 L,D-transpeptidase catalytic domain Toce_1659 PF01476 LysM domain Toce_1660 PF00535 Glycosyl transferase family 2 Toce_1661 PF08386 TAP-like protein Toce_1661 PF00561 alpha/beta hydrolase fold Toce_1662 PF03063 Prismane/CO dehydrogenase family Toce_1667 PF02872 5'-nucleotidase, C-terminal domain Toce_1667 PF00149 Calcineurin-like phosphoesterase Toce_1670 PF17760 UvrA interaction domain Toce_1670 PF17755 UvrA DNA-binding domain Toce_1671 PF17757 UvrB interaction domain Toce_1671 PF02151 UvrB/uvrC motif Toce_1671 PF12344 Ultra-violet resistance protein B Toce_1671 PF04851 Type III restriction enzyme, res subunit Toce_1671 PF00271 Helicase conserved C-terminal domain Toce_1672 PF00664 ABC transporter transmembrane region Toce_1672 PF00005 ABC transporter Toce_1673 PF00005 ABC transporter Toce_1673 PF00664 ABC transporter transmembrane region Toce_1674 PF01047 MarR family Toce_1677 PF05544 Proline racemase Toce_1678 PF09338 Glycine/sarcosine/betaine reductase component B subunits Toce_1679 PF09338 Glycine/sarcosine/betaine reductase component B subunits Toce_1680 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Toce_1681 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) Toce_1683 PF09338 Glycine/sarcosine/betaine reductase component B subunits Toce_1684 PF13237 4Fe-4S dicluster domain Toce_1684 PF10531 SLBB domain Toce_1684 PF13375 RnfC Barrel sandwich hybrid domain Toce_1684 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Toce_1685 PF00158 Sigma-54 interaction domain Toce_1685 PF00072 Response regulator receiver domain Toce_1685 PF02954 Bacterial regulatory protein, Fis family Toce_1687 PF13180 PDZ domain Toce_1688 PF03572 Peptidase family S41 Toce_1688 PF01471 Putative peptidoglycan binding domain Toce_1688 PF17820 PDZ domain Toce_1689 PF01551 Peptidase family M23 Toce_1690 PF02687 FtsX-like permease family Toce_1690 PF18075 FtsX extracellular domain Toce_1691 PF00005 ABC transporter Toce_1692 PF00885 6,7-dimethyl-8-ribityllumazine synthase Toce_1693 PF00925 GTP cyclohydrolase II Toce_1693 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Toce_1694 PF00677 Lumazine binding domain Toce_1695 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Toce_1695 PF01872 RibD C-terminal domain Toce_1696 PF00535 Glycosyl transferase family 2 Toce_1699 PF13411 MerR HTH family regulatory protein Toce_1699 PF07739 TipAS antibiotic-recognition domain Toce_1700 PF02056 Family 4 glycosyl hydrolase Toce_1700 PF11975 Family 4 glycosyl hydrolase C-terminal domain Toce_1701 PF02779 Transketolase, pyrimidine binding domain Toce_1701 PF02780 Transketolase, C-terminal domain Toce_1702 PF00456 Transketolase, thiamine diphosphate binding domain Toce_1703 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Toce_1703 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Toce_1704 PF03808 Glycosyl transferase WecB/TagA/CpsF family Toce_1709 PF02810 SEC-C motif Toce_1709 PF07516 SecA Wing and Scaffold domain Toce_1709 PF07517 SecA DEAD-like domain Toce_1709 PF01043 SecA preprotein cross-linking domain Toce_1711 PF00072 Response regulator receiver domain Toce_1713 PF17910 FeoB cytosolic helical domain Toce_1713 PF07670 Nucleoside recognition Toce_1713 PF02421 Ferrous iron transport protein B Toce_1713 PF04023 FeoA domain Toce_1713 PF07664 Ferrous iron transport protein B C terminus Toce_1716 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Toce_1717 PF09515 Thiamine transporter protein (Thia_YuaJ) Toce_1719 PF01992 ATP synthase (C/AC39) subunit Toce_1720 PF01496 V-type ATPase 116kDa subunit family Toce_1721 PF00137 ATP synthase subunit C Toce_1722 PF01990 ATP synthase (F/14-kDa) subunit Toce_1724 PF16886 ATPsynthase alpha/beta subunit N-term extension Toce_1724 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_1724 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_1725 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_1725 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_1726 PF01813 ATP synthase subunit D Toce_1730 PF00348 Polyprenyl synthetase Toce_1731 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_1733 PF00356 Bacterial regulatory proteins, lacI family Toce_1734 PF03190 Protein of unknown function, DUF255 Toce_1735 PF01139 tRNA-splicing ligase RtcB Toce_1736 PF04055 Radical SAM superfamily Toce_1737 PF00795 Carbon-nitrogen hydrolase Toce_1740 PF00005 ABC transporter Toce_1742 PF12833 Helix-turn-helix domain Toce_1742 PF00072 Response regulator receiver domain Toce_1744 PF01547 Bacterial extracellular solute-binding protein Toce_1745 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1746 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1747 PF04545 Sigma-70, region 4 Toce_1747 PF04539 Sigma-70 region 3 Toce_1747 PF04542 Sigma-70 region 2 Toce_1750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Toce_1750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Toce_1757 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Toce_1757 PF03120 NAD-dependent DNA ligase OB-fold domain Toce_1757 PF01653 NAD-dependent DNA ligase adenylation domain Toce_1757 PF12826 Helix-hairpin-helix motif Toce_1757 PF00533 BRCA1 C Terminus (BRCT) domain Toce_1758 PF00580 UvrD/REP helicase N-terminal domain Toce_1758 PF13361 UvrD-like helicase C-terminal domain Toce_1759 PF01371 Trp repressor protein Toce_1760 PF01546 Peptidase family M20/M25/M40 Toce_1761 PF01569 PAP2 superfamily Toce_1763 PF02664 S-Ribosylhomocysteinase (LuxS) Toce_1764 PF05362 Lon protease (S16) C-terminal proteolytic domain Toce_1764 PF00004 ATPase family associated with various cellular activities (AAA) Toce_1764 PF02190 ATP-dependent protease La (LON) substrate-binding domain Toce_1765 PF05362 Lon protease (S16) C-terminal proteolytic domain Toce_1765 PF00004 ATPase family associated with various cellular activities (AAA) Toce_1766 PF10431 C-terminal, D2-small domain, of ClpB protein Toce_1766 PF06689 ClpX C4-type zinc finger Toce_1766 PF07724 AAA domain (Cdc48 subfamily) Toce_1767 PF00574 Clp protease Toce_1769 PF13419 Haloacid dehalogenase-like hydrolase Toce_1770 PF03636 Glycosyl hydrolase family 65, N-terminal domain Toce_1770 PF03632 Glycosyl hydrolase family 65 central catalytic domain Toce_1770 PF03633 Glycosyl hydrolase family 65, C-terminal domain Toce_1772 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1773 PF00528 Binding-protein-dependent transport system inner membrane component Toce_1774 PF00356 Bacterial regulatory proteins, lacI family Toce_1777 PF00082 Subtilase family Toce_1779 PF00158 Sigma-54 interaction domain Toce_1779 PF13426 PAS domain Toce_1779 PF02954 Bacterial regulatory protein, Fis family Toce_1780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Toce_1780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Toce_1782 PF01725 Ham1 family Toce_1783 PF03725 3' exoribonuclease family, domain 2 Toce_1783 PF01138 3' exoribonuclease family, domain 1 Toce_1784 PF10646 Sporulation and spore germination Toce_1785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Toce_1786 PF01520 N-acetylmuramoyl-L-alanine amidase Toce_1788 PF03553 Na+/H+ antiporter family Toce_1789 PF00561 alpha/beta hydrolase fold Toce_1790 PF01053 Cys/Met metabolism PLP-dependent enzyme Toce_1793 PF02915 Rubrerythrin Toce_1794 PF10502 Signal peptidase, peptidase S26 Toce_1795 PF01520 N-acetylmuramoyl-L-alanine amidase Toce_1795 PF04122 Putative cell wall binding repeat 2 Toce_1796 PF07690 Major Facilitator Superfamily Toce_1798 PF00483 Nucleotidyl transferase Toce_1798 PF01050 Mannose-6-phosphate isomerase Toce_1800 PF00375 Sodium:dicarboxylate symporter family Toce_1801 PF03313 Serine dehydratase alpha chain Toce_1802 PF01842 ACT domain Toce_1802 PF03315 Serine dehydratase beta chain Toce_1803 PF00291 Pyridoxal-phosphate dependent enzyme Toce_1803 PF13291 ACT domain Toce_1804 PF01042 Endoribonuclease L-PSP Toce_1806 PF00005 ABC transporter Toce_1806 PF17912 MalK OB fold domain Toce_1806 PF03459 TOBE domain Toce_1807 PF13556 PucR C-terminal helix-turn-helix domain Toce_1807 PF17853 GGDEF-like domain Toce_1807 PF05651 Putative sugar diacid recognition Toce_1808 PF03023 Lipid II flippase MurJ Toce_1809 PF01325 Iron dependent repressor, N-terminal DNA binding domain Toce_1809 PF00480 ROK family Toce_1810 PF01116 Fructose-bisphosphate aldolase class-II Toce_1811 PF01926 50S ribosome-binding GTPase Toce_1811 PF13167 GTP-binding GTPase N-terminal Toce_1811 PF16360 GTP-binding GTPase Middle Region Toce_1816 PF01171 PP-loop family Toce_1817 PF02597 ThiS family Toce_1818 PF01668 SmpB protein Toce_1819 PF17876 Cold shock domain Toce_1819 PF00575 S1 RNA binding domain Toce_1819 PF00773 RNB domain Toce_1819 PF08206 Ribonuclease B OB domain Toce_1820 PF12072 Domain of unknown function (DUF3552) Toce_1820 PF00013 KH domain Toce_1820 PF01966 HD domain Toce_1821 PF07690 Major Facilitator Superfamily Toce_1823 PF02915 Rubrerythrin Toce_1824 PF01145 SPFH domain / Band 7 family Toce_1827 PF00390 Malic enzyme, N-terminal domain Toce_1827 PF03949 Malic enzyme, NAD binding domain Toce_1828 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Toce_1829 PF00364 Biotin-requiring enzyme Toce_1831 PF01039 Carboxyl transferase domain Toce_1833 PF02310 B12 binding domain Toce_1833 PF01642 Methylmalonyl-CoA mutase Toce_1835 PF02080 TrkA-C domain Toce_1835 PF06826 Predicted Permease Membrane Region Toce_1836 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Toce_1836 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Toce_1840 PF02626 Carboxyltransferase domain, subdomain A and B Toce_1841 PF02682 Carboxyltransferase domain, subdomain C and D Toce_1842 PF03746 LamB/YcsF family Toce_1844 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_1844 PF00512 His Kinase A (phospho-acceptor) domain Toce_1844 PF00989 PAS fold Toce_1845 PF00158 Sigma-54 interaction domain Toce_1845 PF02954 Bacterial regulatory protein, Fis family Toce_1845 PF00072 Response regulator receiver domain Toce_1846 PF01566 Natural resistance-associated macrophage protein Toce_1847 PF01544 CorA-like Mg2+ transporter protein Toce_1848 PF03840 Preprotein translocase SecG subunit Toce_1849 PF00889 Elongation factor TS Toce_1850 PF03952 Enolase, N-terminal domain Toce_1850 PF00113 Enolase, C-terminal TIM barrel domain Toce_1851 PF01676 Metalloenzyme superfamily Toce_1851 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Toce_1852 PF00121 Triosephosphate isomerase Toce_1853 PF00162 Phosphoglycerate kinase Toce_1854 PF04198 Putative sugar-binding domain Toce_1855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Toce_1855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Toce_1856 PF00309 Sigma-54 factor, Activator interacting domain (AID) Toce_1856 PF04963 Sigma-54 factor, core binding domain Toce_1856 PF04552 Sigma-54, DNA binding domain Toce_1859 PF01791 DeoC/LacD family aldolase Toce_1860 PF01880 Desulfoferrodoxin Toce_1863 PF13673 Acetyltransferase (GNAT) domain Toce_1863 PF00583 Acetyltransferase (GNAT) family Toce_1864 PF00005 ABC transporter Toce_1866 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Toce_1867 PF03806 AbgT putative transporter family Toce_1868 PF07687 Peptidase dimerisation domain Toce_1868 PF01546 Peptidase family M20/M25/M40 Toce_1871 PF13407 Periplasmic binding protein domain Toce_1872 PF02653 Branched-chain amino acid transport system / permease component Toce_1873 PF00005 ABC transporter Toce_1874 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Toce_1874 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Toce_1875 PF01116 Fructose-bisphosphate aldolase class-II Toce_1876 PF00294 pfkB family carbohydrate kinase Toce_1877 PF07385 D-lyxose isomerase Toce_1878 PF00356 Bacterial regulatory proteins, lacI family Toce_1885 PF00860 Permease family Toce_1887 PF01312 FlhB HrpN YscU SpaS Family Toce_1892 PF00583 Acetyltransferase (GNAT) family Toce_1893 PF00814 Glycoprotease family Toce_1894 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Toce_1895 PF12822 ECF transporter, substrate-specific component Toce_1896 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Toce_1896 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Toce_1897 PF01081 KDPG and KHG aldolase Toce_1898 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Toce_1898 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Toce_1899 PF02615 Malate/L-lactate dehydrogenase Toce_1900 PF03830 PTS system sorbose subfamily IIB component Toce_1901 PF03830 PTS system sorbose subfamily IIB component Toce_1901 PF03610 PTS system fructose IIA component Toce_1902 PF03613 PTS system mannose/fructose/sorbose family IID component Toce_1904 PF03830 PTS system sorbose subfamily IIB component Toce_1905 PF03610 PTS system fructose IIA component Toce_1905 PF03830 PTS system sorbose subfamily IIB component Toce_1906 PF00158 Sigma-54 interaction domain Toce_1906 PF03610 PTS system fructose IIA component Toce_1906 PF00874 PRD domain Toce_1908 PF03169 OPT oligopeptide transporter protein Toce_1909 PF01979 Amidohydrolase family Toce_1910 PF04951 D-aminopeptidase Toce_1911 PF07722 Peptidase C26 Toce_1913 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Toce_1915 PF00842 Alanine racemase, C-terminal domain Toce_1915 PF01168 Alanine racemase, N-terminal domain Toce_1916 PF03853 YjeF-related protein N-terminus Toce_1916 PF01256 Carbohydrate kinase Toce_1917 PF01648 4'-phosphopantetheinyl transferase superfamily Toce_1918 PF00011 Hsp20/alpha crystallin family Toce_1926 PF01478 Type IV leader peptidase family Toce_1926 PF06750 Bacterial Peptidase A24 N-terminal domain Toce_1927 PF08334 Type II secretion system (T2SS), protein G Toce_1927 PF07963 Prokaryotic N-terminal methylation motif Toce_1928 PF00482 Type II secretion system (T2SS), protein F Toce_1929 PF00437 Type II/IV secretion system protein Toce_1930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Toce_1930 PF00437 Type II/IV secretion system protein Toce_1931 PF13673 Acetyltransferase (GNAT) domain Toce_1932 PF07883 Cupin domain Toce_1932 PF01381 Helix-turn-helix Toce_1933 PF01321 Creatinase/Prolidase N-terminal domain Toce_1933 PF00557 Metallopeptidase family M24 Toce_1934 PF13520 Amino acid permease Toce_1940 PF12706 Beta-lactamase superfamily domain Toce_1940 PF17770 Ribonuclease J C-terminal domain Toce_1940 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Toce_1945 PF18339 RapA N-terminal Tudor like domain 1 Toce_1945 PF00176 SNF2 family N-terminal domain Toce_1945 PF12137 RNA polymerase recycling family C-terminal Toce_1945 PF18337 RapA N-terminal Tudor like domain Toce_1945 PF00271 Helicase conserved C-terminal domain Toce_1947 PF01555 DNA methylase Toce_1948 PF04851 Type III restriction enzyme, res subunit Toce_1948 PF08774 VRR-NUC domain Toce_1950 PF02646 RmuC family Toce_1953 PF02796 Helix-turn-helix domain of resolvase Toce_1953 PF00665 Integrase core domain Toce_1954 PF01695 IstB-like ATP binding protein Toce_1957 PF00665 Integrase core domain Toce_1957 PF13333 Integrase core domain Toce_1958 PF01695 IstB-like ATP binding protein Toce_1959 PF00665 Integrase core domain Toce_1961 PF01638 HxlR-like helix-turn-helix Toce_1965 PF02386 Cation transport protein Toce_1967 PF01380 SIS domain Toce_1968 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Toce_1968 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Toce_1968 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Toce_1968 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Toce_1970 PF02457 DisA bacterial checkpoint controller nucleotide-binding Toce_1972 PF10396 GTP-binding protein TrmE N-terminus Toce_1972 PF12631 MnmE helical domain Toce_1972 PF01926 50S ribosome-binding GTPase Toce_1973 PF01758 Sodium Bile acid symporter family Toce_1974 PF01022 Bacterial regulatory protein, arsR family Toce_1975 PF01022 Bacterial regulatory protein, arsR family Toce_1978 PF02660 Glycerol-3-phosphate acyltransferase Toce_1982 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Toce_1983 PF02378 Phosphotransferase system, EIIC Toce_1984 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Toce_1986 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Toce_1986 PF00874 PRD domain Toce_1986 PF05043 Mga helix-turn-helix domain Toce_1986 PF08279 HTH domain Toce_1986 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Toce_1987 PF08704 tRNA methyltransferase complex GCD14 subunit Toce_1988 PF12804 MobA-like NTP transferase domain Toce_1994 PF02829 3H domain Toce_1994 PF08279 HTH domain Toce_1997 PF01979 Amidohydrolase family Toce_1998 PF01546 Peptidase family M20/M25/M40 Toce_1999 PF02535 ZIP Zinc transporter Toce_2000 PF02954 Bacterial regulatory protein, Fis family Toce_2000 PF13426 PAS domain Toce_2000 PF00158 Sigma-54 interaction domain Toce_2003 PF00072 Response regulator receiver domain Toce_2003 PF00486 Transcriptional regulatory protein, C terminal Toce_2004 PF00512 His Kinase A (phospho-acceptor) domain Toce_2004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_2004 PF00672 HAMP domain Toce_2008 PF07977 FabA-like domain Toce_2010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Toce_2010 PF00460 Flagella basal body rod protein Toce_2011 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Toce_2011 PF00460 Flagella basal body rod protein Toce_2013 PF12116 Stage III sporulation protein D Toce_2015 PF08486 Stage II sporulation protein Toce_2016 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Toce_2018 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Toce_2018 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Toce_2019 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_2019 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_2020 PF00231 ATP synthase Toce_2021 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_2021 PF00306 ATP synthase alpha/beta chain, C terminal domain Toce_2021 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_2022 PF00213 ATP synthase delta (OSCP) subunit Toce_2023 PF00430 ATP synthase B/B' CF(0) Toce_2023 PF00213 ATP synthase delta (OSCP) subunit Toce_2024 PF00137 ATP synthase subunit C Toce_2025 PF00119 ATP synthase A chain Toce_2027 PF07992 Pyridine nucleotide-disulphide oxidoreductase Toce_2027 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Toce_2028 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Toce_2028 PF00364 Biotin-requiring enzyme Toce_2028 PF02817 e3 binding domain Toce_2029 PF01513 ATP-NAD kinase Toce_2030 PF02779 Transketolase, pyrimidine binding domain Toce_2030 PF02780 Transketolase, C-terminal domain Toce_2031 PF00676 Dehydrogenase E1 component Toce_2033 PF13426 PAS domain Toce_2033 PF02954 Bacterial regulatory protein, Fis family Toce_2033 PF00158 Sigma-54 interaction domain Toce_2036 PF13333 Integrase core domain Toce_2036 PF00665 Integrase core domain Toce_2040 PF01813 ATP synthase subunit D Toce_2041 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_2041 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_2042 PF16886 ATPsynthase alpha/beta subunit N-term extension Toce_2042 PF02874 ATP synthase alpha/beta family, beta-barrel domain Toce_2042 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Toce_2043 PF01990 ATP synthase (F/14-kDa) subunit Toce_2044 PF01992 ATP synthase (C/AC39) subunit Toce_2045 PF01991 ATP synthase (E/31 kDa) subunit Toce_2046 PF00137 ATP synthase subunit C Toce_2047 PF01496 V-type ATPase 116kDa subunit family Toce_2052 PF00860 Permease family Toce_2057 PF13722 5TM C-terminal transporter carbon starvation CstA Toce_2057 PF02554 Carbon starvation protein CstA Toce_2058 PF01695 IstB-like ATP binding protein Toce_2059 PF00665 Integrase core domain Toce_2061 PF02350 UDP-N-acetylglucosamine 2-epimerase Toce_2063 PF14437 MafB19-like deaminase Toce_2066 PF02502 Ribose/Galactose Isomerase Toce_2067 PF01451 Low molecular weight phosphotyrosine protein phosphatase Toce_2068 PF01300 Telomere recombination Toce_2068 PF03481 Putative GTP-binding controlling metal-binding Toce_2070 PF02417 Chromate transporter Toce_2071 PF17827 PrmC N-terminal domain Toce_2071 PF05175 Methyltransferase small domain Toce_2072 PF03462 PCRF domain Toce_2072 PF00472 RF-1 domain Toce_2073 PF07136 Protein of unknown function (DUF1385) Toce_2076 PF00583 Acetyltransferase (GNAT) family Toce_2078 PF01871 AMMECR1 Toce_2078 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Toce_2079 PF00202 Aminotransferase class-III Toce_2083 PF01207 Dihydrouridine synthase (Dus) Toce_2084 PF03309 Type III pantothenate kinase Toce_2086 PF02915 Rubrerythrin Toce_2092 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Toce_2092 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Toce_2094 PF06463 Molybdenum Cofactor Synthesis C Toce_2094 PF04055 Radical SAM superfamily Toce_2096 PF01434 Peptidase family M41 Toce_2096 PF06480 FtsH Extracellular Toce_2096 PF17862 AAA+ lid domain Toce_2096 PF00004 ATPase family associated with various cellular activities (AAA) Toce_2098 PF11734 TilS substrate C-terminal domain Toce_2098 PF01171 PP-loop family Toce_2099 PF07228 Stage II sporulation protein E (SpoIIE) Toce_2101 PF00466 Ribosomal protein L10 Toce_2102 PF00687 Ribosomal protein L1p/L10e family Toce_2103 PF00298 Ribosomal protein L11, RNA binding domain Toce_2103 PF03946 Ribosomal protein L11, N-terminal domain Toce_2104 PF02357 Transcription termination factor nusG Toce_2104 PF00467 KOW motif Toce_2105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Toce_2106 PF00471 Ribosomal protein L33 Toce_2107 PF00009 Elongation factor Tu GTP binding domain Toce_2107 PF03144 Elongation factor Tu domain 2 Toce_2107 PF03143 Elongation factor Tu C-terminal domain Toce_2109 PF04542 Sigma-70 region 2 Toce_2109 PF08281 Sigma-70, region 4 Toce_2110 PF05991 YacP-like NYN domain Toce_2111 PF00588 SpoU rRNA Methylase family Toce_2111 PF08032 RNA 2'-O ribose methyltransferase substrate binding Toce_2112 PF02511 Thymidylate synthase complementing protein Toce_2113 PF00636 Ribonuclease III domain Toce_2114 PF01406 tRNA synthetases class I (C) catalytic domain Toce_2114 PF09190 DALR domain Toce_2115 PF06426 Serine acetyltransferase, N-terminal Toce_2115 PF00132 Bacterial transferase hexapeptide (six repeats) Toce_2116 PF03330 Lytic transglycolase Toce_2117 PF02542 YgbB family Toce_2118 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Toce_2120 PF02559 CarD-like/TRCF domain Toce_2122 PF18073 Rubredoxin metal binding domain Toce_2123 PF02861 Clp amino terminal domain, pathogenicity island component Toce_2123 PF07724 AAA domain (Cdc48 subfamily) Toce_2123 PF17871 AAA lid domain Toce_2123 PF10431 C-terminal, D2-small domain, of ClpB protein Toce_2123 PF00004 ATPase family associated with various cellular activities (AAA) Toce_2124 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Toce_2125 PF02151 UvrB/uvrC motif Toce_2126 PF17727 CtsR C-terminal dimerization domain Toce_2126 PF05848 CtsR N-terminal HTH domain Toce_2128 PF14492 Elongation Factor G, domain II Toce_2128 PF03144 Elongation factor Tu domain 2 Toce_2128 PF00009 Elongation factor Tu GTP binding domain Toce_2128 PF00679 Elongation factor G C-terminus Toce_2128 PF03764 Elongation factor G, domain IV Toce_2129 PF00571 CBS domain Toce_2129 PF00478 IMP dehydrogenase / GMP reductase domain Toce_2130 PF00375 Sodium:dicarboxylate symporter family Toce_2133 PF00317 Ribonucleotide reductase, all-alpha domain Toce_2133 PF02867 Ribonucleotide reductase, barrel domain Toce_2133 PF03477 ATP cone domain Toce_2134 PF01475 Ferric uptake regulator family Toce_2137 PF01734 Patatin-like phospholipase Toce_2138 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Toce_2139 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Toce_2139 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Toce_2141 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Toce_2144 PF01810 LysE type translocator Toce_2147 PF02575 YbaB/EbfC DNA-binding family Toce_2148 PF12169 DNA polymerase III subunits gamma and tau domain III Toce_2153 PF14437 MafB19-like deaminase Toce_2155 PF07690 Major Facilitator Superfamily Toce_2159 PF00583 Acetyltransferase (GNAT) family Toce_2160 PF01522 Polysaccharide deacetylase Toce_2160 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain Toce_2163 PF00005 ABC transporter Toce_2163 PF02687 FtsX-like permease family Toce_2163 PF12704 MacB-like periplasmic core domain Toce_2165 PF00005 ABC transporter Toce_2166 PF08360 QacR-like protein, C-terminal region Toce_2166 PF00440 Bacterial regulatory proteins, tetR family Toce_2168 PF00873 AcrB/AcrD/AcrF family Toce_2170 PF13533 Biotin-lipoyl like Toce_2171 PF00005 ABC transporter Toce_2175 PF00395 S-layer homology domain Toce_2177 PF01343 Peptidase family S49 Toce_2179 PF13654 AAA domain Toce_2179 PF05362 Lon protease (S16) C-terminal proteolytic domain Toce_2181 PF06418 CTP synthase N-terminus Toce_2181 PF00117 Glutamine amidotransferase class-I Toce_2183 PF00158 Sigma-54 interaction domain Toce_2183 PF13426 PAS domain Toce_2183 PF02954 Bacterial regulatory protein, Fis family Toce_2184 PF05746 DALR anticodon binding domain Toce_2184 PF03485 Arginyl tRNA synthetase N terminal domain Toce_2184 PF00750 tRNA synthetases class I (R) Toce_2186 PF03600 Citrate transporter Toce_2186 PF02080 TrkA-C domain Toce_2187 PF00571 CBS domain Toce_2187 PF00005 ABC transporter Toce_2188 PF00528 Binding-protein-dependent transport system inner membrane component Toce_2189 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Toce_2190 PF09383 NIL domain Toce_2190 PF00005 ABC transporter Toce_2191 PF00528 Binding-protein-dependent transport system inner membrane component Toce_2192 PF03180 NLPA lipoprotein Toce_2194 PF17763 Glutaminase/Asparaginase C-terminal domain Toce_2194 PF00710 Asparaginase, N-terminal Toce_2195 PF00375 Sodium:dicarboxylate symporter family Toce_2196 PF01177 Asp/Glu/Hydantoin racemase Toce_2198 PF00269 Small, acid-soluble spore proteins, alpha/beta type Toce_2199 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Toce_2199 PF01276 Orn/Lys/Arg decarboxylase, major domain Toce_2201 PF09551 Stage II sporulation protein R (spore_II_R) Toce_2202 PF05504 Spore germination B3/ GerAC like, C-terminal Toce_2203 PF03845 Spore germination protein Toce_2204 PF03323 Bacillus/Clostridium GerA spore germination protein Toce_2206 PF01680 SOR/SNZ family Toce_2207 PF00392 Bacterial regulatory proteins, gntR family Toce_2207 PF00155 Aminotransferase class I and II Toce_2208 PF03951 Glutamine synthetase, beta-Grasp domain Toce_2208 PF00120 Glutamine synthetase, catalytic domain Toce_2209 PF13411 MerR HTH family regulatory protein Toce_2210 PF00392 Bacterial regulatory proteins, gntR family Toce_2210 PF07729 FCD domain Toce_2213 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Toce_2213 PF00384 Molybdopterin oxidoreductase Toce_2213 PF01568 Molydopterin dinucleotide binding domain Toce_2217 PF04542 Sigma-70 region 2 Toce_2217 PF08281 Sigma-70, region 4 Toce_2221 PF02590 Predicted SPOUT methyltransferase Toce_2224 PF09861 Lactate racemase N-terminal domain Toce_2227 PF00665 Integrase core domain Toce_2228 PF01695 IstB-like ATP binding protein Toce_2235 PF13426 PAS domain Toce_2235 PF00512 His Kinase A (phospho-acceptor) domain Toce_2235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toce_2235 PF00672 HAMP domain Toce_2236 PF00072 Response regulator receiver domain Toce_2236 PF00486 Transcriptional regulatory protein, C terminal Toce_2237 PF10942 Protein of unknown function (DUF2619) Toce_2238 PF00005 ABC transporter Toce_2239 PF00528 Binding-protein-dependent transport system inner membrane component Toce_2241 PF04284 Protein of unknown function (DUF441) Toce_2242 PF01551 Peptidase family M23 Toce_2242 PF08525 Opacity-associated protein A N-terminal motif Toce_2242 PF01476 LysM domain Toce_2243 PF01433 Peptidase family M1 domain Toce_2243 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Toce_2243 PF11940 Domain of unknown function (DUF3458) Ig-like fold Toce_2247 PF08000 Bacterial PH domain Toce_2248 PF00709 Adenylosuccinate synthetase Toce_2250 PF13545 Crp-like helix-turn-helix domain Toce_2250 PF00027 Cyclic nucleotide-binding domain Toce_2251 PF03796 DnaB-like helicase C terminal domain Toce_2251 PF00772 DnaB-like helicase N terminal domain Toce_2252 PF03948 Ribosomal protein L9, C-terminal domain Toce_2252 PF01281 Ribosomal protein L9, N-terminal domain Toce_2253 PF02272 DHHA1 domain Toce_2253 PF01368 DHH family Toce_2255 PF01084 Ribosomal protein S18 Toce_2256 PF00436 Single-strand binding protein family Toce_2257 PF01250 Ribosomal protein S6 Toce_2259 PF00924 Mechanosensitive ion channel Toce_2262 PF06866 Protein of unknown function (DUF1256) Toce_2264 PF03698 Uncharacterised protein family (UPF0180) Toce_2266 PF00781 Diacylglycerol kinase catalytic domain Toce_2268 PF01551 Peptidase family M23 Toce_2268 PF08525 Opacity-associated protein A N-terminal motif Toce_2268 PF01476 LysM domain Toce_2271 PF00266 Aminotransferase class-V Toce_2272 PF04055 Radical SAM superfamily Toce_2272 PF06968 Biotin and Thiamin Synthesis associated domain Toce_2274 PF00672 HAMP domain Toce_2274 PF02203 Tar ligand binding domain homologue Toce_2274 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Toce_2275 PF17762 HTH domain found in ParB protein Toce_2275 PF02195 ParB-like nuclease domain Toce_2276 PF13614 AAA domain Toce_2277 PF02195 ParB-like nuclease domain Toce_2277 PF17762 HTH domain found in ParB protein Toce_2280 PF10396 GTP-binding protein TrmE N-terminus Toce_2280 PF01926 50S ribosome-binding GTPase Toce_2280 PF12631 MnmE helical domain Toce_2281 PF01424 R3H domain Toce_2281 PF14804 Jag N-terminus Toce_2282 PF02096 60Kd inner membrane protein Toce_2283 PF01809 Putative membrane protein insertion efficiency factor Toce_2284 PF00825 Ribonuclease P Toce_2285 PF00468 Ribosomal protein L34