Toce_0001 SM00382 ATPases associated with a variety of cellular activities Toce_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain Toce_0002 SM00480 DNA polymerase III beta subunit Toce_0003 SM00363 S4 RNA-binding domain Toce_0007 SM00387 Histidine kinase-like ATPases Toce_0007 SM00433 TopoisomeraseII Toce_0008 SM00434 DNA Topoisomerase IV Toce_0017 SM01130 Toce_0017 Toce_0025 SM00966 SpoVT / AbrB like domain Toce_0026 SM00933 Toce_0026 Toce_0031 SM00650 Ribosomal RNA adenine dimethylases Toce_0035 SM00646 Toce_0035 Toce_0040 SM00257 Lysin motif Toce_0044 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_0044 SM00895 Toce_0044 Toce_0049 SM01400 Toce_0049 Toce_0059 SM00530 Helix-turn-helix XRE-family like proteins Toce_0062 SM00382 ATPases associated with a variety of cellular activities Toce_0066 SM00363 S4 RNA-binding domain Toce_0067 SM00563 Phosphate acyltransferases Toce_0072 SM00487 DEAD-like helicases superfamily Toce_0072 SM00490 helicase superfamily c-terminal domain Toce_0087 SM00450 Rhodanese Homology Domain Toce_0093 SM00382 ATPases associated with a variety of cellular activities Toce_0096 SM00481 DNA polymerase alpha chain like domain Toce_0098 SM00909 Sporulation and spore germination Toce_0099 SM00487 DEAD-like helicases superfamily Toce_0099 SM00490 helicase superfamily c-terminal domain Toce_0099 SM00982 Toce_0099 Toce_0099 SM01058 CarD-like/TRCF domain Toce_0100 SM00966 SpoVT / AbrB like domain Toce_0104 SM00411 bacterial (prokaryotic) histone like domain Toce_0109 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_0112 SM00663 RNA polymerase I subunit A N-terminus Toce_0116 SM00838 Elongation factor G C-terminus Toce_0116 SM00889 Elongation factor G, domain IV Toce_0118 SM01403 Toce_0118 Toce_0122 SM01382 Toce_0122 Toce_0122 SM01383 Toce_0122 Toce_0125 SM00322 K homology RNA-binding domain Toce_0129 SM01374 Toce_0129 Toce_0130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Toce_0142 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_0146 SM00363 S4 RNA-binding domain Toce_0146 SM01390 Toce_0146 Toce_0147 SM00662 RNA polymerases D Toce_0149 SM00382 ATPases associated with a variety of cellular activities Toce_0150 SM00382 ATPases associated with a variety of cellular activities Toce_0172 SM00899 Toce_0172 Toce_0183 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Toce_0189 SM00382 ATPases associated with a variety of cellular activities Toce_0195 SM00382 ATPases associated with a variety of cellular activities Toce_0199 SM00448 cheY-homologous receiver domain Toce_0200 SM00387 Histidine kinase-like ATPases Toce_0200 SM00388 His Kinase A (phosphoacceptor) domain Toce_0201 SM00357 Cold shock protein domain Toce_0201 SM00382 ATPases associated with a variety of cellular activities Toce_0201 SM00959 Rho termination factor, N-terminal domain Toce_0207 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Toce_0207 SM00387 Histidine kinase-like ATPases Toce_0208 SM00448 cheY-homologous receiver domain Toce_0208 SM00850 LytTr DNA-binding domain Toce_0212 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Toce_0215 SM00849 Metallo-beta-lactamase superfamily Toce_0225 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_0225 SM00382 ATPases associated with a variety of cellular activities Toce_0227 SM00091 PAS domain Toce_0239 SM00636 Toce_0239 Toce_0242 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0243 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Toce_0248 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen Toce_0252 SM00240 Forkhead associated domain Toce_0256 SM00382 ATPases associated with a variety of cellular activities Toce_0259 SM00478 endonuclease III Toce_0270 SM00849 Metallo-beta-lactamase superfamily Toce_0272 SM00852 Probable molybdopterin binding domain Toce_0273 SM00852 Probable molybdopterin binding domain Toce_0274 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_0276 SM00852 Probable molybdopterin binding domain Toce_0277 SM00883 Chaperonin 10 Kd subunit Toce_0281 SM00382 ATPases associated with a variety of cellular activities Toce_0285 SM00448 cheY-homologous receiver domain Toce_0285 SM00862 Transcriptional regulatory protein, C terminal Toce_0286 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_0286 SM00387 Histidine kinase-like ATPases Toce_0286 SM00388 His Kinase A (phosphoacceptor) domain Toce_0287 SM00028 Tetratricopeptide repeats Toce_0289 SM01005 Alanine racemase, C-terminal domain Toce_0292 SM00382 ATPases associated with a variety of cellular activities Toce_0293 SM00829 Enoylreductase Toce_0299 SM00382 ATPases associated with a variety of cellular activities Toce_0307 SM00382 ATPases associated with a variety of cellular activities Toce_0322 SM01004 Delta-aminolevulinic acid dehydratase Toce_0325 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_0325 SM00866 Toce_0325 Toce_0350 SM00382 ATPases associated with a variety of cellular activities Toce_0357 SM00382 ATPases associated with a variety of cellular activities Toce_0365 SM01007 Class II Aldolase and Adducin N-terminal domain Toce_0369 SM00387 Histidine kinase-like ATPases Toce_0370 SM00421 helix_turn_helix, Lux Regulon Toce_0370 SM00448 cheY-homologous receiver domain Toce_0372 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Toce_0372 SM00267 diguanylate cyclase Toce_0373 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_0373 SM00382 ATPases associated with a variety of cellular activities Toce_0375 SM00852 Probable molybdopterin binding domain Toce_0377 SM00859 Semialdehyde dehydrogenase, NAD binding domain Toce_0383 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain Toce_0385 SM00346 helix_turn_helix isocitrate lyase regulation Toce_0387 SM01001 AIR carboxylase Toce_0391 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_0392 SM00382 ATPases associated with a variety of cellular activities Toce_0395 SM00382 ATPases associated with a variety of cellular activities Toce_0396 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_0400 SM00530 Helix-turn-helix XRE-family like proteins Toce_0401 SM00530 Helix-turn-helix XRE-family like proteins Toce_0415 SM00858 Toce_0415 Toce_0420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_0440 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Toce_0454 SM00382 ATPases associated with a variety of cellular activities Toce_0454 SM01072 Cell division protein 48 (CDC48) domain 2 Toce_0454 SM01073 Cell division protein 48 (CDC48) N-terminal domain Toce_0455 SM00347 helix_turn_helix multiple antibiotic resistance protein Toce_0459 SM00387 Histidine kinase-like ATPases Toce_0460 SM00448 cheY-homologous receiver domain Toce_0468 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Toce_0469 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Toce_0469 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_0470 SM00260 Two component signalling adaptor domain Toce_0472 SM00448 cheY-homologous receiver domain Toce_0473 SM00267 diguanylate cyclase Toce_0475 SM00644 Toce_0475 Toce_0482 SM00382 ATPases associated with a variety of cellular activities Toce_0487 SM00028 Tetratricopeptide repeats Toce_0489 SM00382 ATPases associated with a variety of cellular activities Toce_0502 SM00984 UDP binding domain Toce_0512 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_0521 SM00966 SpoVT / AbrB like domain Toce_0522 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Toce_0536 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0537 SM00902 Iron hydrogenase small subunit Toce_0537 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Toce_0539 SM00872 Alpha mannosidase, middle domain Toce_0543 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Toce_0545 SM00387 Histidine kinase-like ATPases Toce_0546 SM00342 helix_turn_helix, arabinose operon control protein Toce_0546 SM00448 cheY-homologous receiver domain Toce_0547 SM00877 Toce_0547 Toce_0548 SM00877 Toce_0548 Toce_0554 SM00877 Toce_0554 Toce_0562 SM00877 Toce_0562 Toce_0575 SM00226 Low molecular weight phosphatase family Toce_0586 SM00382 ATPases associated with a variety of cellular activities Toce_0588 SM00382 ATPases associated with a variety of cellular activities Toce_0591 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_0591 SM00866 Toce_0591 Toce_0593 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Toce_0600 SM00382 ATPases associated with a variety of cellular activities Toce_0603 SM00938 Nitrogen regulatory protein P-II Toce_0604 SM00938 Nitrogen regulatory protein P-II Toce_0611 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_0617 SM00382 ATPases associated with a variety of cellular activities Toce_0618 SM00382 ATPases associated with a variety of cellular activities Toce_0624 SM00859 Semialdehyde dehydrogenase, NAD binding domain Toce_0637 SM00363 S4 RNA-binding domain Toce_0649 SM00091 PAS domain Toce_0649 SM00382 ATPases associated with a variety of cellular activities Toce_0650 SM00858 Toce_0650 Toce_0657 SM00845 GatB domain Toce_0661 SM00382 ATPases associated with a variety of cellular activities Toce_0662 SM00382 ATPases associated with a variety of cellular activities Toce_0666 SM00382 ATPases associated with a variety of cellular activities Toce_0683 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain Toce_0688 SM00881 CoA binding domain Toce_0694 SM00387 Histidine kinase-like ATPases Toce_0696 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Toce_0697 SM00902 Iron hydrogenase small subunit Toce_0697 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Toce_0700 SM00900 Toce_0700 Toce_0706 SM01018 B12 binding domain Toce_0720 SM00746 metallochaperone-like domain Toce_0750 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_0752 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_0769 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_0773 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_0779 SM01208 Toce_0779 Toce_0780 SM00936 Penicillin-binding protein 5, C-terminal domain Toce_0786 SM00902 Iron hydrogenase small subunit Toce_0790 SM01018 B12 binding domain Toce_0793 SM01018 B12 binding domain Toce_0794 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_0794 SM00866 Toce_0794 Toce_0819 SM00834 Putative regulatory protein Toce_0820 SM00487 DEAD-like helicases superfamily Toce_0820 SM00490 helicase superfamily c-terminal domain Toce_0828 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain Toce_0829 SM00091 PAS domain Toce_0829 SM00382 ATPases associated with a variety of cellular activities Toce_0831 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Toce_0838 SM00257 Lysin motif Toce_0843 SM00849 Metallo-beta-lactamase superfamily Toce_0847 SM00481 DNA polymerase alpha chain like domain Toce_0857 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_0857 SM00924 MgtE intracellular N domain Toce_0858 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_0858 SM00924 MgtE intracellular N domain Toce_0859 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Toce_0862 SM00481 DNA polymerase alpha chain like domain Toce_0867 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_0868 SM00481 DNA polymerase alpha chain like domain Toce_0876 SM00382 ATPases associated with a variety of cellular activities Toce_0881 SM00831 Cation transporter/ATPase, N-terminus Toce_0883 SM00506 Appr-1"-p processing enzyme Toce_0895 SM00849 Metallo-beta-lactamase superfamily Toce_0903 SM00838 Elongation factor G C-terminus Toce_0904 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_0910 SM00271 DnaJ molecular chaperone homology domain Toce_0913 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_0919 SM00322 K homology RNA-binding domain Toce_0920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_0926 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_0930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_0931 SM00400 zinc finger Toce_0931 SM00493 Toce_0931 Toce_0937 SM00834 Putative regulatory protein Toce_0946 SM00740 Toce_0946 Toce_0958 SM00842 Cell division protein FtsA Toce_0959 SM00864 Tubulin/FtsZ family, GTPase domain Toce_0959 SM00865 Tubulin/FtsZ family, C-terminal domain Toce_0965 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_0967 SM00448 cheY-homologous receiver domain Toce_0967 SM00862 Transcriptional regulatory protein, C terminal Toce_0968 SM00091 PAS domain Toce_0968 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_0968 SM00387 Histidine kinase-like ATPases Toce_0968 SM00388 His Kinase A (phosphoacceptor) domain Toce_0969 SM00382 ATPases associated with a variety of cellular activities Toce_0987 SM00382 ATPases associated with a variety of cellular activities Toce_0993 SM00530 Helix-turn-helix XRE-family like proteins Toce_1015 SM00363 S4 RNA-binding domain Toce_1022 SM00072 Guanylate kinase homologues. Toce_1023 SM01409 Toce_1023 Toce_1025 SM00487 DEAD-like helicases superfamily Toce_1025 SM00490 helicase superfamily c-terminal domain Toce_1031 SM00331 Sigma factor PP2C-like phosphatases Toce_1031 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Toce_1032 SM00220 Serine/Threonine protein kinases, catalytic domain Toce_1032 SM00740 Toce_1032 Toce_1037 SM01120 Toce_1037 Toce_1037 SM01121 Toce_1037 Toce_1038 SM00487 DEAD-like helicases superfamily Toce_1038 SM00490 helicase superfamily c-terminal domain Toce_1045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Toce_1056 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Toce_1057 SM00822 Toce_1057 Toce_1058 SM00823 Phosphopantetheine attachment site Toce_1059 SM00825 Beta-ketoacyl synthase Toce_1060 SM00358 Double-stranded RNA binding motif Toce_1060 SM00535 Ribonuclease III family Toce_1062 SM00968 SMC proteins Flexible Hinge Domain Toce_1063 SM00382 ATPases associated with a variety of cellular activities Toce_1063 SM00962 SRP54-type protein, GTPase domain Toce_1063 SM00963 SRP54-type protein, helical bundle domain Toce_1065 SM00382 ATPases associated with a variety of cellular activities Toce_1065 SM00962 SRP54-type protein, GTPase domain Toce_1065 SM00963 SRP54-type protein, helical bundle domain Toce_1078 SM01018 B12 binding domain Toce_1082 SM00382 ATPases associated with a variety of cellular activities Toce_1085 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Toce_1085 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Toce_1085 SM00493 Toce_1085 Toce_1089 SM00382 ATPases associated with a variety of cellular activities Toce_1089 SM01086 C-terminal, D2-small domain, of ClpB protein Toce_1098 SM00382 ATPases associated with a variety of cellular activities Toce_1111 SM00448 cheY-homologous receiver domain Toce_1118 SM00382 ATPases associated with a variety of cellular activities Toce_1118 SM00962 SRP54-type protein, GTPase domain Toce_1121 SM00073 Histidine Phosphotransfer domain Toce_1121 SM00260 Two component signalling adaptor domain Toce_1121 SM00387 Histidine kinase-like ATPases Toce_1121 SM01231 Toce_1121 Toce_1122 SM00260 Two component signalling adaptor domain Toce_1144 SM00936 Penicillin-binding protein 5, C-terminal domain Toce_1148 SM00363 S4 RNA-binding domain Toce_1151 SM00382 ATPases associated with a variety of cellular activities Toce_1155 SM00563 Phosphate acyltransferases Toce_1156 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_1157 SM01240 Toce_1157 Toce_1159 SM00138 Methyltransferase, chemotaxis proteins Toce_1168 SM00028 Tetratricopeptide repeats Toce_1174 SM00998 Adenylosuccinate lyase C-terminus Toce_1176 SM00834 Putative regulatory protein Toce_1185 SM00382 ATPases associated with a variety of cellular activities Toce_1188 SM00853 MutL C terminal dimerisation domain Toce_1188 SM01340 Toce_1188 Toce_1189 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Toce_1189 SM00534 ATPase domain of DNA mismatch repair MUTS family Toce_1190 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_1191 SM00986 Uracil DNA glycosylase superfamily Toce_1191 SM00987 UreE urease accessory protein, C-terminal domain Toce_1192 SM01208 Toce_1192 Toce_1198 SM00382 ATPases associated with a variety of cellular activities Toce_1201 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Toce_1206 SM00481 DNA polymerase alpha chain like domain Toce_1209 SM00322 K homology RNA-binding domain Toce_1209 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_1215 SM00382 ATPases associated with a variety of cellular activities Toce_1218 SM00852 Probable molybdopterin binding domain Toce_1219 SM00382 ATPases associated with a variety of cellular activities Toce_1221 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_1223 SM00382 ATPases associated with a variety of cellular activities Toce_1223 SM00843 Toce_1223 Toce_1227 SM00849 Metallo-beta-lactamase superfamily Toce_1231 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_1231 SM00322 K homology RNA-binding domain Toce_1232 SM01387 Toce_1232 Toce_1233 SM00904 Riboflavin kinase Toce_1240 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_1240 SM00322 K homology RNA-binding domain Toce_1242 SM00479 Toce_1242 Toce_1242 SM00481 DNA polymerase alpha chain like domain Toce_1246 SM00946 Prolyl-tRNA synthetase, C-terminal Toce_1250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Toce_1268 SM00387 Histidine kinase-like ATPases Toce_1270 SM00936 Penicillin-binding protein 5, C-terminal domain Toce_1290 SM00382 ATPases associated with a variety of cellular activities Toce_1297 SM00382 ATPases associated with a variety of cellular activities Toce_1300 SM00448 cheY-homologous receiver domain Toce_1306 SM00363 S4 RNA-binding domain Toce_1322 SM00382 ATPases associated with a variety of cellular activities Toce_1324 SM00841 Elongation factor P, C-terminal Toce_1324 SM01185 Toce_1324 Toce_1342 SM00831 Cation transporter/ATPase, N-terminus Toce_1345 SM00382 ATPases associated with a variety of cellular activities Toce_1346 SM00062 Bacterial periplasmic substrate-binding proteins Toce_1352 SM00732 Likely ribonuclease with RNase H fold. Toce_1355 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Toce_1360 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Toce_1362 SM00849 Metallo-beta-lactamase superfamily Toce_1364 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_1364 SM00954 Region found in RelA / SpoT proteins Toce_1367 SM00327 von Willebrand factor (vWF) type A domain Toce_1368 SM00382 ATPases associated with a variety of cellular activities Toce_1374 SM01323 Toce_1374 Toce_1380 SM00382 ATPases associated with a variety of cellular activities Toce_1381 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_1389 SM00363 S4 RNA-binding domain Toce_1392 SM00463 Small MutS-related domain Toce_1392 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Toce_1392 SM00534 ATPase domain of DNA mismatch repair MUTS family Toce_1394 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_1394 SM00481 DNA polymerase alpha chain like domain Toce_1394 SM00483 DNA polymerase X family Toce_1396 SM00873 B3/4 domain Toce_1396 SM00874 tRNA synthetase B5 domain Toce_1396 SM00896 Ferredoxin-fold anticodon binding domain Toce_1398 SM00967 RNA 2'-O ribose methyltransferase substrate binding Toce_1405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Toce_1419 SM00855 Phosphoglycerate mutase family Toce_1431 SM00861 Transketolase, pyrimidine binding domain Toce_1442 SM00829 Enoylreductase Toce_1447 SM00382 ATPases associated with a variety of cellular activities Toce_1448 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_1448 SM00465 GIY-YIG type nucleases (URI domain) Toce_1449 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Toce_1452 SM00382 ATPases associated with a variety of cellular activities Toce_1453 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Toce_1453 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Toce_1454 SM00091 PAS domain Toce_1454 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_1454 SM00387 Histidine kinase-like ATPases Toce_1454 SM00388 His Kinase A (phosphoacceptor) domain Toce_1455 SM00448 cheY-homologous receiver domain Toce_1455 SM00862 Transcriptional regulatory protein, C terminal Toce_1462 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_1464 SM00981 Toce_1464 Toce_1474 SM01221 Toce_1474 Toce_1474 SM01222 Toce_1474 Toce_1492 SM00091 PAS domain Toce_1492 SM00382 ATPases associated with a variety of cellular activities Toce_1497 SM01209 Toce_1497 Toce_1497 SM01210 Toce_1497 Toce_1498 SM00798 AICARFT/IMPCHase bienzyme Toce_1498 SM00851 MGS-like domain Toce_1503 SM01211 Toce_1503 Toce_1506 SM01001 AIR carboxylase Toce_1509 SM00382 ATPases associated with a variety of cellular activities Toce_1511 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_1511 SM00478 endonuclease III Toce_1511 SM00525 Toce_1511 Toce_1512 SM00518 AP endonuclease family 2 Toce_1514 SM00481 DNA polymerase alpha chain like domain Toce_1525 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_1525 SM01131 Toce_1525 Toce_1528 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Toce_1528 SM00245 tail specific protease Toce_1532 SM00834 Putative regulatory protein Toce_1533 SM01018 B12 binding domain Toce_1541 SM00331 Sigma factor PP2C-like phosphatases Toce_1544 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_1545 SM00421 helix_turn_helix, Lux Regulon Toce_1560 SM00091 PAS domain Toce_1560 SM00382 ATPases associated with a variety of cellular activities Toce_1567 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Toce_1568 SM00091 PAS domain Toce_1568 SM00382 ATPases associated with a variety of cellular activities Toce_1570 SM00382 ATPases associated with a variety of cellular activities Toce_1572 SM00062 Bacterial periplasmic substrate-binding proteins Toce_1572 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Toce_1587 SM00028 Tetratricopeptide repeats Toce_1588 SM00028 Tetratricopeptide repeats Toce_1591 SM00984 UDP binding domain Toce_1607 SM00062 Bacterial periplasmic substrate-binding proteins Toce_1611 SM00382 ATPases associated with a variety of cellular activities Toce_1613 SM00062 Bacterial periplasmic substrate-binding proteins Toce_1627 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Toce_1629 SM00382 ATPases associated with a variety of cellular activities Toce_1632 SM00382 ATPases associated with a variety of cellular activities Toce_1640 SM00478 endonuclease III Toce_1645 SM00382 ATPases associated with a variety of cellular activities Toce_1646 SM00382 ATPases associated with a variety of cellular activities Toce_1649 SM00562 Toce_1649 Toce_1653 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Toce_1653 SM00474 3'-5' exonuclease Toce_1653 SM00475 5'-3' exonuclease Toce_1653 SM00482 DNA polymerase A domain Toce_1654 SM00530 Helix-turn-helix XRE-family like proteins Toce_1670 SM00382 ATPases associated with a variety of cellular activities Toce_1671 SM00487 DEAD-like helicases superfamily Toce_1671 SM00490 helicase superfamily c-terminal domain Toce_1672 SM00382 ATPases associated with a variety of cellular activities Toce_1673 SM00382 ATPases associated with a variety of cellular activities Toce_1674 SM00347 helix_turn_helix multiple antibiotic resistance protein Toce_1674 SM00529 Helix-turn-helix diphteria tox regulatory element Toce_1685 SM00091 PAS domain Toce_1685 SM00382 ATPases associated with a variety of cellular activities Toce_1687 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Toce_1688 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Toce_1688 SM00245 tail specific protease Toce_1691 SM00382 ATPases associated with a variety of cellular activities Toce_1699 SM00422 helix_turn_helix, mercury resistance Toce_1701 SM00861 Transketolase, pyrimidine binding domain Toce_1709 SM00957 SecA DEAD-like domain Toce_1709 SM00958 SecA preprotein cross-linking domain Toce_1711 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_1713 SM00899 Toce_1713 Toce_1729 SM00900 Toce_1729 Toce_1733 SM00354 helix_turn _helix lactose operon repressor Toce_1740 SM00382 ATPases associated with a variety of cellular activities Toce_1741 SM00642 Alpha-amylase domain Toce_1742 SM00342 helix_turn_helix, arabinose operon control protein Toce_1742 SM00448 cheY-homologous receiver domain Toce_1757 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_1757 SM00292 breast cancer carboxy-terminal domain Toce_1757 SM00532 Ligase N family Toce_1761 SM00014 Acid phosphatase homologues Toce_1764 SM00382 ATPases associated with a variety of cellular activities Toce_1764 SM00464 Found in ATP-dependent protease La (LON) Toce_1765 SM00382 ATPases associated with a variety of cellular activities Toce_1766 SM00382 ATPases associated with a variety of cellular activities Toce_1766 SM00994 ClpX C4-type zinc finger Toce_1766 SM01086 C-terminal, D2-small domain, of ClpB protein Toce_1774 SM00354 helix_turn _helix lactose operon repressor Toce_1779 SM00382 ATPases associated with a variety of cellular activities Toce_1784 SM00909 Sporulation and spore germination Toce_1786 SM00646 Toce_1786 Toce_1787 SM00881 CoA binding domain Toce_1795 SM00646 Toce_1795 Toce_1806 SM00382 ATPases associated with a variety of cellular activities Toce_1819 SM00316 Ribosomal protein S1-like RNA-binding domain Toce_1819 SM00357 Cold shock protein domain Toce_1819 SM00955 Toce_1819 Toce_1824 SM00244 prohibitin homologues Toce_1827 SM00919 Malic enzyme, NAD binding domain Toce_1827 SM01274 Toce_1827 Toce_1838 SM01119 Toce_1838 Toce_1840 SM00797 Allophanate hydrolase subunit 2 Toce_1841 SM00796 Allophanate hydrolase subunit 1 Toce_1844 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_1844 SM00387 Histidine kinase-like ATPases Toce_1844 SM00388 His Kinase A (phosphoacceptor) domain Toce_1845 SM00382 ATPases associated with a variety of cellular activities Toce_1845 SM00448 cheY-homologous receiver domain Toce_1850 SM01192 Toce_1850 Toce_1850 SM01193 Toce_1850 Toce_1855 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Toce_1859 SM01133 Toce_1859 Toce_1864 SM00382 ATPases associated with a variety of cellular activities Toce_1873 SM00382 ATPases associated with a variety of cellular activities Toce_1878 SM00354 helix_turn _helix lactose operon repressor Toce_1896 SM01350 Toce_1896 Toce_1906 SM00382 ATPases associated with a variety of cellular activities Toce_1912 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Toce_1915 SM01005 Alanine racemase, C-terminal domain Toce_1929 SM00382 ATPases associated with a variety of cellular activities Toce_1930 SM00382 ATPases associated with a variety of cellular activities Toce_1932 SM00530 Helix-turn-helix XRE-family like proteins Toce_1941 SM00465 GIY-YIG type nucleases (URI domain) Toce_1945 SM00487 DEAD-like helicases superfamily Toce_1945 SM00490 helicase superfamily c-terminal domain Toce_1948 SM00487 DEAD-like helicases superfamily Toce_1954 SM00382 ATPases associated with a variety of cellular activities Toce_1958 SM00382 ATPases associated with a variety of cellular activities Toce_1974 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Toce_1975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Toce_1978 SM01207 Toce_1978 Toce_2000 SM00091 PAS domain Toce_2000 SM00382 ATPases associated with a variety of cellular activities Toce_2003 SM00448 cheY-homologous receiver domain Toce_2003 SM00862 Transcriptional regulatory protein, C terminal Toce_2004 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_2004 SM00387 Histidine kinase-like ATPases Toce_2004 SM00388 His Kinase A (phosphoacceptor) domain Toce_2019 SM00382 ATPases associated with a variety of cellular activities Toce_2030 SM00861 Transketolase, pyrimidine binding domain Toce_2033 SM00091 PAS domain Toce_2033 SM00382 ATPases associated with a variety of cellular activities Toce_2042 SM00382 ATPases associated with a variety of cellular activities Toce_2058 SM00382 ATPases associated with a variety of cellular activities Toce_2067 SM00226 Low molecular weight phosphatase family Toce_2072 SM00937 Toce_2072 Toce_2077 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_2092 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Toce_2093 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Toce_2094 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_2096 SM00382 ATPases associated with a variety of cellular activities Toce_2098 SM00977 TilS substrate C-terminal domain Toce_2099 SM00331 Sigma factor PP2C-like phosphatases Toce_2103 SM00649 Ribosomal protein L11/L12 Toce_2104 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Toce_2104 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Toce_2111 SM00967 RNA 2'-O ribose methyltransferase substrate binding Toce_2114 SM00840 Toce_2114 Toce_2119 SM00670 Large family of predicted nucleotide-binding domains Toce_2120 SM01058 CarD-like/TRCF domain Toce_2122 SM00382 ATPases associated with a variety of cellular activities Toce_2123 SM00382 ATPases associated with a variety of cellular activities Toce_2123 SM01086 C-terminal, D2-small domain, of ClpB protein Toce_2128 SM00838 Elongation factor G C-terminus Toce_2128 SM00889 Elongation factor G, domain IV Toce_2129 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_2129 SM01240 Toce_2129 Toce_2146 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Toce_2146 SM00493 Toce_2146 Toce_2148 SM00382 ATPases associated with a variety of cellular activities Toce_2152 SM00530 Helix-turn-helix XRE-family like proteins Toce_2160 SM01207 Toce_2160 Toce_2165 SM00382 ATPases associated with a variety of cellular activities Toce_2171 SM00382 ATPases associated with a variety of cellular activities Toce_2183 SM00091 PAS domain Toce_2183 SM00382 ATPases associated with a variety of cellular activities Toce_2184 SM00836 DALR anticodon binding domain Toce_2184 SM01016 Arginyl tRNA synthetase N terminal dom Toce_2186 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_2187 SM00116 Domain in cystathionine beta-synthase and other proteins. Toce_2187 SM00382 ATPases associated with a variety of cellular activities Toce_2190 SM00382 ATPases associated with a variety of cellular activities Toce_2190 SM00930 Toce_2190 Toce_2194 SM00870 Toce_2194 Toce_2197 SM00564 beta-propeller repeat Toce_2207 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_2208 SM01230 Toce_2208 Toce_2209 SM00422 helix_turn_helix, mercury resistance Toce_2210 SM00345 helix_turn_helix gluconate operon transcriptional repressor Toce_2210 SM00895 Toce_2210 Toce_2213 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Toce_2228 SM00382 ATPases associated with a variety of cellular activities Toce_2235 SM00091 PAS domain Toce_2235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Toce_2235 SM00387 Histidine kinase-like ATPases Toce_2235 SM00388 His Kinase A (phosphoacceptor) domain Toce_2236 SM00448 cheY-homologous receiver domain Toce_2236 SM00862 Transcriptional regulatory protein, C terminal Toce_2238 SM00382 ATPases associated with a variety of cellular activities Toce_2242 SM00257 Lysin motif Toce_2242 SM01208 Toce_2242 Toce_2248 SM00788 Adenylosuccinate synthetase Toce_2250 SM00100 Cyclic nucleotide-monophosphate binding domain Toce_2250 SM00419 helix_turn_helix, cAMP Regulatory protein Toce_2266 SM00046 Diacylglycerol kinase catalytic domain (presumed) Toce_2272 SM00729 Elongator protein 3, MiaB family, Radical SAM Toce_2272 SM00876 Biotin and Thiamin Synthesis associated domain Toce_2273 SM00876 Biotin and Thiamin Synthesis associated domain Toce_2274 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Toce_2275 SM00470 ParB-like nuclease domain Toce_2277 SM00470 ParB-like nuclease domain Toce_2279 SM01228 Toce_2279 Toce_2281 SM00322 K homology RNA-binding domain Toce_2281 SM00393 Putative single-stranded nucleic acids-binding domain Toce_2281 SM01245 Toce_2281 Toce_2283 SM01234 Toce_2283