locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Toce_0001 Toce_0001 Toce_0001 102 1451 + chromosomal replication initiator protein DnaA COGs: COG0593 ATPase involved in DNA replication initiation~InterProIPR001957:IPR013317:IPR013159:IPR020591:IPR 003593:IPR018312~KEGG: bmq:BMQ_0001 chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication initiator DnaA%3B Chromosomal replication initiator DnaA domain~SMART: Chromosomal replication initiator DnaA domain%3B AAA ATPase~SPTR: Chromosomal replication initiator protein dnaA%3B~TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: domain%3B Bacterial dnaA protein~TIGRFAM: chromosomal replication initiator protein DnaA gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0001 Toce_0002 Toce_0002 Toce_0002 1702 2814 + DNA polymerase III%2C beta subunit COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)~InterPro IPR001001~KEGG: tte:TTE0002 DNA polymerase III subunit beta~PFAM: DNA polymerase III beta chain~PRIAM: DNA-directed DNA polymerase~SMART: DNA polymerase III beta chain~SPTR: DNA polymerase III%2C beta subunit%3B~TIGRFAM: DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta subunit%2C C-terminal domain%3B DNA polymerase III beta subunit%2C N-terminal domain%3B DNA polymerase III beta subunit%2C central domain~TIGRFAM: DNA polymerase III%2C beta subunit gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0002 Toce_0003 Toce_0003 Toce_0003 2811 3029 + RNA-binding S4 domain protein COGs: COG2501 conserved hypothetical protein~InterPro IPR002942~KEGG: cac:CAC0003 hypothetical protein~PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: S4 domain gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0003 Toce_0004 Toce_0004 Toce_0004 3031 4134 + DNA replication and repair protein RecF COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway)~InterPro IPR001238:IPR003395~KEGG: bha:BH0004 recombination protein F~PFAM: SMC domain protein~SPTR: DNA replication and repair protein recF%3B~TIGRFAM: DNA replication and repair protein RecF~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: recF protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0004 Toce_0005 Toce_0005 Toce_0005 4139 4624 + protein of unknown function DUF721 InterPro IPR007922~KEGG: gsu:GSU0638 hypothetical protein~PFAM: protein of unknown function DUF721~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF721) gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0005 Toce_0006 Toce_0006 Toce_0006 4605 4862 + conserved hypothetical protein KEGG: dae:Dtox_0005 hypothetical protein~SPTR: Putative uncharacterized protein gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0006 Toce_0007 Toce_0007 Toce_0007 4879 6792 + DNA gyrase subunit B COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit~InterProIPR011557:IPR003594:IPR013506:IPR006171:IPR 002288:IPR000565:IPR001241:IPR018522~KEGG: tpd:Teth39_0010 DNA gyrase subunit B~PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B ATP-binding region ATPase domain protein%3B TOPRIM domain protein%3B DNA gyrase subunit B domain protein~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein~SPTR: DNA topoisomerase IV%2C B subunit%3B~TIGRFAM: DNA gyrase%2C B subunit~PFAM: Toprim domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B DNA gyrase B%3B DNA gyrase B subunit%2C carboxyl terminus~TIGRFAM: DNA topoisomerase IV%2C B subunit%2C Gram-positive%3B DNA gyrase%2C B subunit gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0007 Toce_0008 Toce_0008 Toce_0008 6807 9236 + DNA gyrase subunit A COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit~InterPro IPR005743:IPR002205:IPR006691~KEGG: chy:CHY_2704 DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller~PRIAM: DNA topoisomerase (ATP-hydrolyzing)~SMART: DNA gyrase/topoisomerase IV subunit A~SPTR: DNA gyrase%2C A subunit%3B~TIGRFAM: DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV%2C subunit A%3B DNA gyrase C-terminal domain%2C beta-propeller~TIGRFAM: DNA gyrase%2C A subunit gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0008 Toce_0009 Toce_0009 Toce_0009 9233 9481 - conserved hypothetical protein KEGG: pth:PTH_1732 hypothetical protein~SPTR: Putative uncharacterized protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0009 Toce_0010 Toce_0010 Toce_0010 9577 10998 + Orn/Lys/Arg decarboxylase major region COGs: COG1982 Arginine/lysine/ornithine decarboxylase~InterPro IPR000310:IPR008286~KEGG: cya:CYA_1002 Orn/Lys/Arg decarboxylase~PFAM: Orn/Lys/Arg decarboxylase major region%3B Orn/Lys/Arg decarboxylase domain protein~SPTR: Orn/Lys/Arg decarboxylase%3B~PFAM: Orn/Lys/Arg decarboxylase%2C C-terminal domain%3B Orn/Lys/Arg decarboxylase%2C major domain gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0010 Toce_0011 Toce_0011 Toce_0011 10991 11626 + thymidylate kinase COGs: COG0125 Thymidylate kinase~InterPro IPR018094:IPR000062:IPR018095~KEGG: gwc:GWCH70_0026 thymidylate kinase~PFAM: thymidylate kinase~PRIAM: dTMP kinase~SPTR: Thymidylate kinase%3B~TIGRFAM: thymidylate kinase~PFAM: Thymidylate kinase~TIGRFAM: thymidylate kinase gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0011 Toce_0012 Toce_0012 Toce_0012 11655 11978 + protein of unknown function DUF970 COGs: COG3870 conserved hypothetical protein~InterPro IPR010375~KEGG: sth:STH3257 hypothetical protein~PFAM: protein of unknown function DUF970~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF970) gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0012 Toce_0013 Toce_0013 Toce_0013 11975 12418 + protein of unknown function DUF327 COGs: COG1728 conserved hypothetical protein~InterPro IPR005585~KEGG: bha:BH1478 hypothetical protein~PFAM: protein of unknown function DUF327~SPTR: BH1478 protein%3B~PFAM: Protein of unknown function (DUF327) gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0013 Toce_0014 Toce_0014 Toce_0014 12402 13217 + DNA polymerase III gamma/tau subunits COGs: COG2812 DNA polymerase III gamma/tau subunits~KEGG: bbe:BBR47_00780 DNA polymerase III delta' subunit~SPTR: DNA polymerase III delta' subunit gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0014 Toce_0015 Toce_0015 Toce_0015 13219 14052 + PSP1 domain protein COGs: COG1774 Uncharacterized homolog of PSP1~InterPro IPR007557~KEGG: gwc:GWCH70_0028 PSP1 domain protein~PFAM: PSP1 domain protein~SPTR: PSP1 domain protein%3B~PFAM: PSP1 C-terminal conserved region gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0015 Toce_0016 Toce_0016 Toce_0016 14135 14836 + peptidase membrane zinc metallopeptidase putative COGs: COG2738 Zn-dependent protease~InterPro IPR007395~KEGG: hmo:HM1_2075 conserved hypothetical protein%2C possible neutral zinc metallopeptidase~PFAM: peptidase membrane zinc metallopeptidase putative~SPTR: Putative uncharacterized protein%3B~PFAM: Putative neutral zinc metallopeptidase gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0016 Toce_0017 Toce_0017 Toce_0017 14959 15834 + dihydrodipicolinate synthase COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase~InterPro IPR005263:IPR002220:IPR020624:IPR020625~KEGG: dae:Dtox_3164 dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase~SPTR: Dihydrodipicolinate synthase%3B~TIGRFAM: dihydrodipicolinate synthase~PFAM: Dihydrodipicolinate synthetase family~TIGRFAM: dihydrodipicolinate synthase gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0017 Toce_0018 Toce_0018 Toce_0018 15926 16828 - Hsp33 protein COGs: COG1281 Disulfide bond chaperones of the HSP33 family~InterPro IPR000397~KEGG: gyc:GYMC61_0064 HSP33 protein~PFAM: Hsp33 protein~SPTR: Chaperonin HslO%3B~PFAM: Hsp33 protein gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0018 Toce_0019 Toce_0019 Toce_0019 16983 17840 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: bcg:BCG9842_B3361 putative polysaccharide deacetylase~PFAM: polysaccharide deacetylase~SPTR: Putative polysaccharide deacetylase%3B~PFAM: Polysaccharide deacetylase~TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0019 Toce_0020 Toce_0020 Toce_0020 17817 18455 - thiamine-phosphate diphosphorylase COGs: COG0352 Thiamine monophosphate synthase~InterPro IPR003733~KEGG: tit:Thit_0601 thiamine-phosphate pyrophosphorylase~PFAM: thiamine monophosphate synthase~SPTR: Thiamine-phosphate pyrophosphorylase%3B~TIGRFAM: thiamine-phosphate pyrophosphorylase~PFAM: Thiamine monophosphate synthase/TENI~TIGRFAM: thiamine-phosphate pyrophosphorylase gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0020 Toce_0021 Toce_0021 Toce_0021 18475 19278 - phosphomethylpyrimidine kinase COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase~InterPro IPR004399:IPR013749~KEGG: tte:TTE2235 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1~SPTR: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase%3B~TIGRFAM: phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase~TIGRFAM: phosphomethylpyrimidine kinase gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0021 Toce_0022 Toce_0022 Toce_0022 19577 20122 - GCN5-related N-acetyltransferase COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein~InterPro IPR000182~KEGG: tex:Teth514_0342 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0022 Toce_0023 Toce_0023 Toce_0023 20400 21275 + Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase COGs: COG0313 methyltransferase~InterPro IPR008189:IPR000878:IPR018063~KEGG: tit:Thit_0092 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase%3B~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: conserved hypothetical protein TIGR00096 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0023 Toce_0024 Toce_0024 Toce_0024 21357 22187 + pyrroline-5-carboxylate reductase COGs: COG0345 Pyrroline-5-carboxylate reductase~InterPro IPR000304:IPR004455~KEGG: ddf:DEFDS_1283 pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent~PRIAM: Pyrroline-5-carboxylate reductase~SPTR: Pyrroline-5-carboxylate reductase%3B~TIGRFAM: pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent~TIGRFAM: pyrroline-5-carboxylate reductase gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0024 Toce_0025 Toce_0025 Toce_0025 22259 22510 - transcriptional regulator%2C AbrB family InterPro IPR006339:IPR007159~KEGG: cac:CAC3647 transition state regulatory protein AbrB~PFAM: SpoVT/AbrB domain protein~SPTR: Transition state regulatory protein AbrB%3B~TIGRFAM: transcriptional regulator%2C AbrB family~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0025 Toce_0026 Toce_0026 Toce_0026 22640 23596 + NurA domain protein InterPro IPR018977~KEGG: bcl:ABC0059 hypothetical protein~PFAM: NurA domain~SPTR: NurA domain superfamily%3B~PFAM: NurA domain gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0026 Toce_0027 Toce_0027 Toce_0027 23690 25522 + conserved hypothetical protein COGs: COG0433 ATPase~InterPro IPR002543~KEGG: bha:BH0052 hypothetical protein~SPTR: BH0052 protein%3B~PFAM: Domain of unknown function DUF87 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0027 Toce_0028 Toce_0028 Toce_0028 25846 27780 + methionyl-tRNA synthetase COGs: COG0143 Methionyl-tRNA synthetase~InterProIPR002304:IPR004495:IPR015413:IPR002547:IPR 014758:IPR018247~KEGG: ttj:TTHA1298 methionyl-tRNA synthetase~PFAM: tRNA synthetase class I (M)%3B t-RNA-binding domain protein~SPTR: Methionyl-tRNA synthetase%3B~TIGRFAM: methionyl-tRNA synthetase%3B methionyl-tRNA synthetase%2C beta subunit~PFAM: Anticodon-binding domain%3B tRNA synthetases class I (M)%3B Putative tRNA binding domain~TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain%3B methionyl-tRNA synthetase gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0028 Toce_0029 Toce_0029 Toce_0029 27792 28568 + hydrolase%2C TatD family COGs: COG0084 Mg-dependent DNase~InterPro IPR012278:IPR015991:IPR001130~KEGG: tit:Thit_0099 hydrolase%2C TatD family~PFAM: TatD-related deoxyribonuclease~SPTR: Hydrolase%2C TatD family%3B~TIGRFAM: hydrolase%2C TatD family~PFAM: TatD related DNase~TIGRFAM: hydrolase%2C TatD family gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0029 Toce_0030 Toce_0030 Toce_0030 28657 29268 + Radical SAM domain protein InterPro IPR007197~KEGG: drm:Dred_1747 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0030 Toce_0031 Toce_0031 Toce_0031 29265 30113 + dimethyladenosine transferase COGs: COG0030 Dimethyladenosine transferase (rRNA methylation)~InterPro IPR011530:IPR001737:IPR020598:IPR020596~KEGG: gym:GYMC10_0027 dimethyladenosine transferase~PFAM: ribosomal RNA adenine methylase transferase~PRIAM: rRNA (adenine-N(6)-)-methyltransferase~SMART: Ribosomal RNA adenine methylase transferase-like~SPTR: Dimethyladenosine transferase%3B~TIGRFAM: dimethyladenosine transferase~PFAM: Ribosomal RNA adenine dimethylase~TIGRFAM: dimethyladenosine transferase gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0031 Toce_0032 Toce_0032 Toce_0032 30205 30675 + protein of unknown function DUF458 COGs: COG1978 conserved hypothetical protein~InterPro IPR007405~KEGG: mta:Moth_0053 hypothetical protein~PFAM: protein of unknown function DUF458~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF458) gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0032 Toce_0033 Toce_0033 Toce_0033 30668 31486 - glycosyl transferase family 2 InterPro IPR001173~KEGG: adg:Adeg_2109 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0033 Toce_0034 Toce_0034 Toce_0034 31588 32445 + sporulation peptidase YabG InterPro IPR008764~KEGG: dhd:Dhaf_0082 sporulation peptidase YabG~PFAM: peptidase U57 YabG~SPTR: Sporulation peptidase YabG%3B~TIGRFAM: sporulation peptidase YabG~PFAM: YabG peptidase U57~TIGRFAM: sporulation peptidase YabG gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0034 Toce_0035 Toce_0035 Toce_0035 32462 33901 + SpoIID/LytB domain protein COGs: COG2385 Sporulation protein and related protein~InterPro IPR014225:IPR013486:IPR013693:IPR002508~KEGG: aoe:Clos_0281 SpoIID/LytB domain-containing protein~PFAM: cell wall hydrolase/autolysin%3B Stage II sporulation D domain protein~SMART: cell wall hydrolase/autolysin~SPTR: SpoIID/LytB domain%3B~TIGRFAM: SpoIID/LytB domain protein%3B stage II sporulation protein D~PFAM: N-acetylmuramoyl-L-alanine amidase%3B Stage II sporulation protein~TIGRFAM: SpoIID/LytB domain%3B stage II sporulation protein D gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0035 Toce_0036 Toce_0036 Toce_0036 34039 34302 + protein of unknown function DUF1021 COGs: COG4466 Uncharacterized protein~InterPro IPR009366~KEGG: amt:Amet_4610 hypothetical protein~PFAM: protein of unknown function DUF1021~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1021) gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0036 Toce_0037 Toce_0037 Toce_0037 34403 35407 + conserved hypothetical protein KEGG: mta:Moth_0200 hypothetical protein~SPTR: Putative uncharacterized protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0037 Toce_0038 Toce_0038 Toce_0038 35590 36270 + SCP-like extracellular COGs: COG2340 Uncharacterized protein with SCP/PR1 domains~InterPro IPR014258:IPR014044~KEGG: pth:PTH_2171 hypothetical protein~PFAM: SCP-like extracellular~SPTR: Uncharacterized protein%3B~PFAM: Cysteine-rich secretory protein family~TIGRFAM: uncharacterized protein%2C YkwD family gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0038 Toce_0039 Toce_0039 Toce_0039 36470 36889 + hypothetical protein KEGG: bfo:BRAFLDRAFT_74208 hypothetical protein~SPTR: Putative uncharacterized protein gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0039 Toce_0040 Toce_0040 Toce_0040 37030 38652 + spore coat assembly protein SafA InterPro IPR014248:IPR018392:IPR002482~KEGG: hor:Hore_21410 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM~SPTR: Peptidoglycan-binding LysM%3B~TIGRFAM: spore coat assembly protein SafA~PFAM: LysM domain~TIGRFAM: spore coat assembly protein SafA gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0040 Toce_0041 Toce_0041 Toce_0041 38728 39570 + cyanophycinase COGs: COG4242 Cyanophycinase and related exopeptidase~InterPro IPR011811:IPR005320~KEGG: dhd:Dhaf_0084 cyanophycinase~PFAM: peptidase S51 dipeptidase E~PRIAM: Cyanophycinase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: cyanophycinase~PFAM: Peptidase family S51~TIGRFAM: cyanophycinase gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0041 Toce_0042 Toce_0042 Toce_0042 39616 42243 + cyanophycin synthetase COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~InterProIPR011810:IPR005479:IPR013221:IPR004101:IPR 018109:IPR011761~KEGG: tte:TTE2785 cyanophycin synthetase~PFAM: Mur ligase middle domain protein%3B Carbamoyl-phosphate synthase L chain ATP-binding%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: UDP-N-acetylmuramyl tripeptide synthase%3B~TIGRFAM: cyanophycin synthetase~PFAM: RimK-like ATP-grasp domain%3B Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type%3B cyanophycin synthetase gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0042 Toce_0043 Toce_0043 Toce_0043 42323 43177 + 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase~InterPro IPR004424:IPR006204:IPR013750:IPR000870~KEGG: cce:Ccel_0022 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein~SPTR: 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase%3B~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0043 Toce_0044 Toce_0044 Toce_0044 43190 43891 + transcriptional regulator%2C GntR family COGs: COG1802 Transcriptional regulators~InterPro IPR000524:IPR011711:IPR000485~KEGG: mta:Moth_0073 GntR family transcriptional regulator~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0044 Toce_0045 Toce_0045 Toce_0045 43885 44643 + molybdopterin-guanine dinucleotide biosynthesis protein A-like protein KEGG: tpd:Teth39_0178 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein~SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein%3B~PFAM: Uncharacterized protein family UPF0007 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0045 Toce_0046 Toce_0046 Toce_0046 44640 45464 + pur operon repressor COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein~InterPro IPR010078:IPR015265:IPR000836~KEGG: aoe:Clos_2648 pur operon repressor~PFAM: purine repressor %3B phosphoribosyltransferase~SPTR: Purine operon repressor%2C PurR%3B~TIGRFAM: pur operon repressor~PFAM: Phosphoribosyl transferase domain%3B Bacterial purine repressor%2C N-terminal~TIGRFAM: pur operon repressor%2C Bacillus subtilis type gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0046 Toce_0047 Toce_0047 Toce_0047 45516 45776 + SpoVG family protein COGs: COG2088 Uncharacterized protein involved in the regulation of septum location~InterPro IPR007170~KEGG: gyc:GYMC61_0042 SpoVG family protein~PFAM: SpoVG family protein~SPTR: Uncharacterized protein%2C involved in the regulation of septum location%3B~PFAM: SpoVG gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0047 Toce_0048 Toce_0048 Toce_0048 45896 47296 + glucosamine-1-phosphate N-acetyltransferase %3BUDP-N-acetylglucosamine pyrophosphorylase COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)~InterPro IPR005882:IPR005835:IPR001451:IPR018357~KEGG: tte:TTE2572 N-acetylglucosamine-1-phosphate uridyltransferase~PFAM: Nucleotidyl transferase%3B transferase hexapeptide repeat containing protein~SPTR: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase%3B~TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase~PFAM: Nucleotidyl transferase~TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0048 Toce_0049 Toce_0049 Toce_0049 47280 48218 + ribose-phosphate pyrophosphokinase COGs: COG0462 Phosphoribosylpyrophosphate synthetase~InterPro IPR005946:IPR000836:IPR000842~KEGG: chy:CHY_0193 ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase~PRIAM: Ribose-phosphate diphosphokinase~SPTR: Ribose-phosphate pyrophosphokinase%3B~TIGRFAM: ribose-phosphate pyrophosphokinase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: ribose-phosphate pyrophosphokinase gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0049 Toce_0050 Toce_0050 Toce_0050 48282 48914 + ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc)~InterPro IPR001021:IPR020055~KEGG: gka:GK0045 50S ribosomal protein L25/general stress protein Ctc~PFAM: Ribosomal protein L25-like~SPTR: 50S ribosomal protein L25%3B~TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5~PFAM: Ribosomal L25p family~TIGRFAM: ribosomal protein L25%2C Ctc-form gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0050 Toce_0051 Toce_0051 Toce_0051 48963 49526 + peptidyl-tRNA hydrolase COGs: COG0193 Peptidyl-tRNA hydrolase~InterPro IPR001328:IPR018171~KEGG: tit:Thit_2235 peptidyl-tRNA hydrolase~PFAM: peptidyl-tRNA hydrolase~PRIAM: Aminoacyl-tRNA hydrolase~SPTR: Peptidyl-tRNA hydrolase%3B~TIGRFAM: peptidyl-tRNA hydrolase~PFAM: Peptidyl-tRNA hydrolase~TIGRFAM: peptidyl-tRNA hydrolase gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0051 Toce_0052 Toce_0052 Toce_0052 49612 49899 + hypothetical protein KEGG: lsg:lse_1318 hypothetical protein~SPTR: Putative uncharacterized protein gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0052 Toce_0053 Toce_0053 Toce_0053 50083 54072 + pseudogene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0053 Toce_0054 Toce_0054 Toce_0054 51505 53574 + transcriptional antiterminator%2C BglG COGs: COG3711 Transcriptional antiterminator~InterPro IPR011608:IPR002178:IPR013011~KEGG: amt:Amet_4270 transcriptional antiterminator%2C BglG~PFAM: PRD domain protein~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: Transcriptional antiterminator%2C BglG%3B~PFAM: HTH domain%3B Mga helix-turn-helix domain%3B PTS system%2C Lactose/Cellobiose specific IIB subunit%3B PRD domain%3B Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0054 Toce_0055 Toce_0055 Toce_0055 54069 55202 + D-mannitol 1-phosphate 5-dehydrogenase COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase~InterPro IPR013131:IPR013118:IPR000669~KEGG: bbe:BBR47_56360 mannitol-1-phosphate 5-dehydrogenase~PFAM: Mannitol dehydrogenase domain%3B Mannitol dehydrogenase rossman domain~SPTR: Mannitol-1-phosphate 5-dehydrogenase%3B~PFAM: Mannitol dehydrogenase C-terminal domain%3B Mannitol dehydrogenase Rossmann domain gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0055 Toce_0056 Toce_0056 Toce_0056 55444 55958 + pseudogene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0056 Toce_0057 Toce_0057 Toce_0057 55948 56932 + pseudogene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0057 Toce_0058 Toce_0058 Toce_0058 57025 57123 + hypothetical protein gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0058 Toce_0059 Toce_0059 Toce_0059 57306 58079 - helix-turn-helix domain protein InterPro IPR001387:IPR018130~KEGG: adg:Adeg_1668 transcriptional regulator%2C XRE family~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0059 Toce_0060 Toce_0060 Toce_0060 58235 58549 + thioredoxin COGs: COG3118 Thioredoxin domain-containing protein~InterProIPR005746:IPR013766:IPR006662:IPR017937:IPR 017936~KEGG: rmr:Rmar_0180 thioredoxin~PFAM: Thioredoxin domain~SPTR: Thioredoxin%3B~TIGRFAM: thioredoxin~PFAM: Thioredoxin~TIGRFAM: thioredoxin gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0060 Toce_0061 Toce_0061 Toce_0061 58676 59635 + periplasmic solute binding protein COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin~InterPro IPR006127:IPR006129:IPR006128~KEGG: lmy:LM5923_2813 hypothetical protein~PFAM: periplasmic solute binding protein~SPTR: Periplasmic solute binding protein%3B~PFAM: Periplasmic solute binding protein family gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0061 Toce_0062 Toce_0062 Toce_0062 59652 60407 + ABC transporter related protein COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component~InterPro IPR003439:IPR003593:IPR017871~KEGG: amt:Amet_1173 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0062 Toce_0063 Toce_0063 Toce_0063 60432 61256 + ABC-3 protein COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components~InterPro IPR001626~KEGG: amt:Amet_1174 ABC-3 protein~PFAM: ABC-3 protein~SPTR: ABC-3 protein%3B~PFAM: ABC 3 transport family gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0063 Toce_0064 Toce_0064 Toce_0064 61235 61672 + ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: amt:Amet_2333 ferric uptake regulator family protein~PFAM: ferric-uptake regulator~SPTR: Ferric uptake regulator%2C Fur family%3B~PFAM: Ferric uptake regulator family gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0064 Toce_0065 Toce_0065 Toce_0065 62169 62678 + tryptophan transport protein KEGG: aoe:Clos_0393 tryptophan transport protein~SPTR: Tryptophan transport protein gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0065 Toce_0066 Toce_0066 Toce_0066 62848 63609 + RNA-binding S4 domain protein COGs: COG2302 conserved hypothetical protein contains S4-like domain~InterPro IPR002942~KEGG: tte:TTE1597 hypothetical protein~PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: S4 domain gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0066 Toce_0067 Toce_0067 Toce_0067 63681 64292 + phospholipid/glycerol acyltransferase COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase~InterPro IPR002123~KEGG: dau:Daud_1727 phospholipid/glycerol acyltransferase~PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~SPTR: Phospholipid/glycerol acyltransferase%3B~PFAM: Acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0067 Toce_0068 Toce_0068 Toce_0068 64413 65168 + CRISPR-associated protein Cas6 COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR010156:IPR002743~KEGG: dhd:Dhaf_3942 CRISPR-associated protein Cas6~PFAM: protein of unknown function DUF57~SPTR: CRISPR-associated protein Cas6%3B~TIGRFAM: CRISPR-associated protein Cas6~PFAM: CRISPR associated protein Cas6~TIGRFAM: CRISPR-associated protein Cas6 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0068 Toce_0069 Toce_0069 Toce_0069 65208 67267 + pseudogene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0069 Toce_0070 Toce_0070 Toce_0070 67292 68242 + CRISPR-associated protein%2C Csh2 family COGs: COG3649 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR006482~KEGG: pth:PTH_1918 hypothetical protein~PFAM: CRISPR-associated protein TM1801~SPTR: Uncharacterized protein%3B~TIGRFAM: CRISPR-associated protein%2C CT1132 family~PFAM: Family of unknown function (DUF694)~TIGRFAM: CRISPR-associated protein%2C CT1132 family%3B CRISPR-associated protein%2C Csh2 family gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0070 Toce_0071 Toce_0071 Toce_0071 68281 68979 + CRISPR-associated protein Cas5 InterPro IPR013422~KEGG: CRISPR-associated protein Cas5~SPTR: Putative uncharacterized protein%3B~TIGRFAM: CRISPR-associated protein Cas5~PFAM: CRISPR-associated protein (Cas_Cas5)~TIGRFAM: CRISPR-associated protein Cas5%2C Hmari subtype%3B CRISPR-associated protein Cas5%2C N-terminal domain gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0071 Toce_0072 Toce_0072 Toce_0072 68973 71408 + CRISPR-associated HD domain protein COGs: COG1203 helicase~InterProIPR006483:IPR006474:IPR006935:IPR001650:IPR 014001~KEGG: pth:PTH_1916 helicases~PFAM: type III restriction protein res subunit%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Predicted helicases%3B~TIGRFAM: CRISPR-associated HD domain protein%3B CRISPR-associated helicase Cas3~PFAM: DEAD/DEAH box helicase~TIGRFAM: CRISPR-associated helicase Cas3 gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0072 Toce_0073 Toce_0073 Toce_0073 71422 71952 + CRISPR-associated exonuclease%2C Cas4 family COGs: COG1468 RecB family exonuclease~InterPro IPR013343~KEGG: pth:PTH_1915 endonuclease~SPTR: RecB family exonuclease%3B~TIGRFAM: CRISPR-associated protein Cas4~manually curated~PFAM: Domain of unknown function DUF83~TIGRFAM: CRISPR-associated protein Cas4 gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0073 Toce_0074 Toce_0074 Toce_0074 72005 72997 + CRISPR-associated protein%2C Cas1 family COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR019858:IPR002729~KEGG: tpd:Teth39_0134 CRISPR-associated Cas1 family protein~PFAM: protein of unknown function DUF48~SPTR: CRISPR-associated protein Cas1%3B~TIGRFAM: CRISPR-associated protein Cas1~PFAM: CRISPR associated protein Cas1~TIGRFAM: CRISPR-associated protein Cas1%2C HMARI/TNEAP subtype%3B CRISPR-associated protein Cas1 gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0074 Toce_0075 Toce_0075 Toce_0075 73019 73282 + CRISPR-associated protein%2C Cas2 family COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair~InterPro IPR021127~KEGG: tit:Thit_2277 CRISPR-associated protein Cas2~SPTR: CRISPR-associated protein Cas2%3B~TIGRFAM: CRISPR-associated protein Cas2~PFAM: CRISPR associated protein Cas2~TIGRFAM: CRISPR-associated protein Cas2 gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0075 Toce_0076 Toce_0076 Toce_0076 78250 78561 + transposase IS3/IS911 family protein InterPro IPR002514~KEGG: swo:Swol_2510 transposase IS3/IS911~PFAM: transposase IS3/IS911 family protein~SPTR: Transposase IS3/IS911%3B~PFAM: Transposase gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0076 Toce_0077 Toce_0077 Toce_0077 78591 79515 + pseudogene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0077 Toce_0078 Toce_0078 Toce_0078 79808 81028 - transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: tit:Thit_1358 transposase IS116/IS110/IS902 family protein~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Transposase IS116/IS110/IS902 family protein%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0078 Toce_0079 Toce_0079 Toce_0079 81597 82370 + CRISPR-associated protein Cas6 COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR010156:IPR002743~KEGG: tpd:Teth39_0121 CRISPR-associated Cas family protein~PFAM: protein of unknown function DUF57~SPTR: Putative uncharacterized protein%3B~TIGRFAM: CRISPR-associated protein Cas6~PFAM: CRISPR associated protein Cas6~TIGRFAM: CRISPR-associated protein Cas6 gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0079 Toce_0080 Toce_0080 Toce_0080 82600 82935 - conserved hypothetical protein KEGG: hor:Hore_11230 hypothetical protein~SPTR: Putative uncharacterized protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0080 Toce_0081 Toce_0081 Toce_0081 83249 84472 + transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: pth:PTH_2606 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Hypothetical transposase%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0081 Toce_0082 Toce_0082 Toce_0082 84877 85107 + conserved hypothetical protein InterPro IPR001455~KEGG: chy:CHY_0625 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: SirA-like protein gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0082 Toce_0083 Toce_0083 Toce_0083 85104 86006 - transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119~KEGG: chy:CHY_0628 LysR family transcriptional regulator~PFAM: LysR substrate-binding%3B regulatory protein LysR~SPTR: Transcriptional regulator%2C LysR family%3B~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0083 Toce_0084 Toce_0084 Toce_0084 86124 86765 + protein of unknown function DUF395 YeeE/YedE InterPro IPR007272~KEGG: tex:Teth514_0045 protein of unknown function DUF395%2C YeeE/YedE~PFAM: protein of unknown function DUF395 YeeE/YedE~SPTR: Putative uncharacterized protein%3B~PFAM: YeeE/YedE family (DUF395) gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0084 Toce_0085 Toce_0085 Toce_0085 86790 87344 + protein of unknown function DUF395 YeeE/YedE InterPro IPR007272~KEGG: tit:Thit_0078 protein of unknown function DUF395 YeeE/YedE~PFAM: protein of unknown function DUF395 YeeE/YedE~SPTR: Putative uncharacterized protein%3B~PFAM: YeeE/YedE family (DUF395) gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0085 Toce_0086 Toce_0086 Toce_0086 87455 90004 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase~InterPro IPR013027:IPR004017:IPR000759:IPR017900~KEGG: vpa:VP1199 putative glutamate synthase%2C small chain~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B protein of unknown function DUF224 cysteine-rich region domain protein~SPTR: Pyridine nucleotide-disulphide oxidoreductase family protein%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Cysteine-rich domain gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0086 Toce_0087 Toce_0087 Toce_0087 90024 90980 + Rhodanese domain protein COGs: COG2897 Rhodanese-related sulfurtransferase~InterPro IPR001763:IPR001307~KEGG: ttr:Tter_1312 rhodanese domain protein~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~SPTR: Thiosulfate sulfurtransferase%3B~PFAM: Rhodanese-like domain gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0087 Toce_0088 Toce_0088 Toce_0088 91044 91757 + SNARE associated Golgi protein-related protein COGs: COG0398 conserved hypothetical protein~InterPro IPR015414~KEGG: vfi:VF_A0098 inner membrane protein~PFAM: SNARE associated Golgi protein~SPTR: Putative membrane protein%3B~PFAM: SNARE associated Golgi protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0088 Toce_0089 Toce_0089 Toce_0089 91770 92366 + CDP-alcohol phosphatidyltransferase InterPro IPR000462~KEGG: amt:Amet_3296 CDP-alcohol phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase~SPTR: CDP-alcohol phosphatidyltransferase%3B~PFAM: CDP-alcohol phosphatidyltransferase gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0089 Toce_0090 Toce_0090 Toce_0090 92369 93625 + extracellular solute-binding protein family 1 COGs: COG4134 ABC-type uncharacterized transport system periplasmic component~InterPro IPR006059~KEGG: amt:Amet_3295 putative ABC transporter solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Extracellular solute-binding protein%2C putative%3B~PFAM: Bacterial extracellular solute-binding protein gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0090 Toce_0091 Toce_0091 Toce_0091 93627 94484 + binding-protein-dependent transport systems inner membrane component COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: amt:Amet_3294 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0091 Toce_0092 Toce_0092 Toce_0092 94486 95286 + binding-protein-dependent transport systems inner membrane component COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II~InterPro IPR000515~KEGG: amt:Amet_3293 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0092 Toce_0093 Toce_0093 Toce_0093 95305 96336 + ABC transporter related protein COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterPro IPR003439:IPR013611:IPR003593:IPR017871~KEGG: amt:Amet_3292 ABC transporter related~PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter%3B TOBE domain gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0093 Toce_0094 Toce_0094 Toce_0094 96442 96762 + hypothetical protein KEGG: ecb:100065379 hephaestin~SPTR: Putative uncharacterized protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0094 Toce_0095 Toce_0095 Toce_0095 96835 98001 + pseudogene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0095 Toce_0096 Toce_0096 Toce_0096 98004 101189 - DNA polymerase III%2C alpha subunit COGs: COG0587 DNA polymerase III alpha subunit~InterProIPR004805:IPR004013:IPR011708:IPR004365:IPR 003141:IPR002226~KEGG: adg:Adeg_0434 DNA polymerase III%2C alpha subunit~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~PRIAM: DNA-directed DNA polymerase~SMART: phosphoesterase PHP domain protein~SPTR: DNA polymerase III%2C alpha subunit%3B~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: Bacterial DNA polymerase III alpha subunit%3B PHP domain%3B OB-fold nucleic acid binding domain~TIGRFAM: DNA-directed DNA polymerase III (polc) gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0096 Toce_0097 Toce_0097 Toce_0097 101353 101766 + conserved hypothetical protein KEGG: amt:Amet_0159 hypothetical protein~SPTR: Putative uncharacterized protein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0097 Toce_0098 Toce_0098 Toce_0098 101812 102720 + Lipoprotein LpqB%2C GerMN domain protein COGs: COG5401 Spore germination protein~InterPro IPR019606~KEGG: adg:Adeg_1491 lipoprotein LpqB%2C GerMN domain protein~PFAM: Lipoprotein LpqB%2C GerMN domain~SPTR: Spore germination protein-like protein%3B~PFAM: Sporulation and spore germination gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0098 Toce_0099 Toce_0099 Toce_0099 102939 106472 + transcription-repair coupling factor COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase)~InterProIPR004576:IPR003711:IPR011545:IPR001650:IPR 005118:IPR014001:IPR014021~KEGG: tte:TTE2565 transcription-repair coupling factor~PFAM: transcription factor CarD%3B DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B TRCF domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Transcription-repair coupling factor-superfamily II helicase%3B~TIGRFAM: transcription-repair coupling factor~PFAM: Helicase conserved C-terminal domain%3B TRCF domain%3B CarD-like/TRCF domain%3B DEAD/DEAH box helicase~TIGRFAM: transcription-repair coupling factor (mfd) gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0099 Toce_0100 Toce_0100 Toce_0100 106541 107107 + transcriptional regulator%2C AbrB family InterPro IPR014213:IPR006339:IPR007159~KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression~PFAM: SpoVT/AbrB domain protein~SPTR: Regulators of stationary/sporulation gene expression%3B~TIGRFAM: stage V sporulation protein T%3B transcriptional regulator%2C AbrB family~PFAM: SpoVT / AbrB like domain~TIGRFAM: looped-hinge helix DNA binding domain%2C AbrB family%3B stage V sporulation protein T gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0100 Toce_0101 Toce_0101 Toce_0101 107171 108739 - phosphoenolpyruvate carboxykinase (ATP) COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP)~InterPro IPR001272:IPR015994~KEGG: tte:TTE1783 phosphoenolpyruvate carboxykinase~PFAM: phosphoenolpyruvate carboxykinase (ATP)~SPTR: Phosphoenolpyruvate carboxykinase [ATP]%3B~TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)~PFAM: Phosphoenolpyruvate carboxykinase~TIGRFAM: phosphoenolpyruvate carboxykinase (ATP) gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0101 Toce_0102 Toce_0102 Toce_0102 109056 110663 + stage V sporulation protein B COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid~InterPro IPR014249:IPR002797~KEGG: amt:Amet_0163 polysaccharide biosynthesis protein~PFAM: polysaccharide biosynthesis protein~SPTR: Polysaccharide biosynthesis protein%3B~TIGRFAM: stage V sporulation protein B~PFAM: Polysaccharide biosynthesis protein~TIGRFAM: stage V sporulation protein B gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0102 Toce_0103 Toce_0103 Toce_0103 110671 111456 + MazG family protein COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain~InterPro IPR011551:IPR004518~KEGG: tpd:Teth39_0248 MazG family protein~PFAM: MazG nucleotide pyrophosphohydrolase~SPTR: MazG family protein%3B~TIGRFAM: MazG family protein~PFAM: MazG nucleotide pyrophosphohydrolase domain~TIGRFAM: MazG family protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0103 Toce_0104 Toce_0104 Toce_0104 111544 111819 + bacterial nucleoid protein Hbs COGs: COG0776 Bacterial nucleoid DNA-binding protein~InterPro IPR000119:IPR020816~KEGG: ate:Athe_0648 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein~SPTR: Histone family protein DNA-binding protein%3B~PFAM: Bacterial DNA-binding protein gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0104 Toce_0105 Toce_0105 Toce_0105 111951 112922 + SpoIID/LytB domain protein COGs: COG2385 Sporulation protein and related protein~InterPro IPR013486:IPR013693~KEGG: aoe:Clos_2635 SpoIID/LytB domain-containing protein~PFAM: Stage II sporulation D domain protein~SPTR: SpoIID/LytB domain%3B~TIGRFAM: SpoIID/LytB domain protein~PFAM: Stage II sporulation protein~TIGRFAM: SpoIID/LytB domain gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0105 Toce_0106 Toce_0106 Toce_0106 112992 113273 + sporulation protein YabP InterPro IPR012504~KEGG: nth:Nther_0072 sporulation protein YabP~PFAM: YabP family protein~SPTR: Sporulation protein YabP%3B~TIGRFAM: sporulation protein YabP~PFAM: YabP family~TIGRFAM: sporulation protein YabP gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0106 Toce_0107 Toce_0107 Toce_0107 113304 113741 + spore cortex biosynthesis protein YabQ InterPro IPR014242:IPR019074~KEGG: cth:Cthe_2660 hypothetical protein~PFAM: Spore cortex biosynthesis protein%2C YabQ-like~SPTR: Putative uncharacterized protein%3B~TIGRFAM: spore cortex biosynthesis protein YabQ~PFAM: Spore cortex protein YabQ (Spore_YabQ)~TIGRFAM: spore cortex biosynthesis protein YabQ gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0107 Toce_0108 Toce_0108 Toce_0108 113805 114092 + Septum formation initiator InterPro IPR007060~KEGG: tye:THEYE_A1003 septum formation initiator family protein~PFAM: Septum formation initiator~SPTR: Septum formation initiator family protein%3B~PFAM: Septum formation initiator gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0108 Toce_0109 Toce_0109 Toce_0109 114171 114548 + RNA binding S1 domain protein COGs: COG1098 RNA binding protein (contains ribosomal protein S1 domain)~InterPro IPR003029~KEGG: pth:PTH_0189 RNA binding protein~PFAM: RNA binding S1 domain protein~SPTR: Predicted RNA binding protein%3B~PFAM: S1 RNA binding domain gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0109 Toce_0110 Toce_0110 Toce_0110 114645 115556 + Ppx/GppA phosphatase COGs: COG0248 Exopolyphosphatase~InterPro IPR003695~KEGG: tit:Thit_2128 Ppx/GppA phosphatase~PFAM: Ppx/GppA phosphatase~SPTR: Ppx/GppA phosphatase%3B~PFAM: Ppx/GppA phosphatase family gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0110 Toce_0111 Toce_0111 Toce_0111 115753 119382 + DNA-directed RNA polymerase subunit beta COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit~InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641:IPR007121~KEGG: cth:Cthe_2724 DNA-directed RNA polymerase subunit beta~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2 domain 2%3B RNA polymerase Rpb2 domain 3%3B DNA-directed RNA polymerase%2C beta subunit%2C external 1 domain%3B RNA polymerase Rpb2 domain 7~SPTR: DNA-directed RNA polymerase%3B~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~manually curated~PFAM: RNA polymerase Rpb2%2C domain 3%3B RNA polymerase Rpb2%2C domain 6%3B RNA polymerase beta subunit external 1 domain%3B RNA polymerase Rpb2%2C domain 2%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2%2C domain 7~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0111 Toce_0112 Toce_0112 Toce_0112 119461 123015 + DNA-directed RNA polymerase subunit beta' COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit~InterProIPR012754:IPR007080:IPR000722:IPR007066:IPR 007083:IPR007081:IPR006592~KEGG: tit:Thit_1982 DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1 domain 1%3B RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 4%3B RNA polymerase Rpb1 domain 5~SMART: RNA polymerase I subunit A domain protein~SPTR: DNA-directed RNA polymerase%3B~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1%2C domain 2%3B RNA polymerase Rpb1%2C domain 4%3B RNA polymerase Rpb1%2C domain 1%3B RNA polymerase Rpb1%2C domain 3%3B RNA polymerase Rpb1%2C domain 5~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit%2C predominant form gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0112 Toce_0113 Toce_0113 Toce_0113 123107 123355 + LSU ribosomal protein L7AE InterPro IPR004038:IPR000948~KEGG: sth:STH3081 ribosomal protein L7AE family protein~PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45~SPTR: Ribosomal protein L7AE family%3B~PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0113 Toce_0114 Toce_0114 Toce_0114 123418 123792 + SSU ribosomal protein S12P COGs: COG0048 Ribosomal protein S12~InterPro IPR006032:IPR005679~KEGG: cno:NT01CX_1110 30S ribosomal protein S12~PFAM: ribosomal protein S12/S23~SPTR: 30S ribosomal protein S12%3B~TIGRFAM: ribosomal protein S12~PFAM: Ribosomal protein S12~TIGRFAM: ribosomal protein S12%2C bacterial/organelle gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0114 Toce_0115 Toce_0115 Toce_0115 123810 124283 + SSU ribosomal protein S7P COGs: COG0049 Ribosomal protein S7~InterPro IPR005717:IPR000235~KEGG: ate:Athe_0808 ribosomal protein S7~PFAM: ribosomal protein S7~SPTR: 30S ribosomal protein S7%3B~TIGRFAM: ribosomal protein S7~PFAM: Ribosomal protein S7p/S5e~TIGRFAM: ribosomal protein S7%2C bacterial/organelle gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0115 Toce_0116 Toce_0116 Toce_0116 124342 126408 + translation elongation factor 2 (EF-2/EF-G) COGs: COG0480 Translation elongation factors (GTPase)~InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640~KEGG: ate:Athe_0809 translation elongation factor G~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV%3B elongation factor G domain protein~SPTR: Elongation factor G%3B~TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0116 Toce_0117 Toce_0117 Toce_0117 126428 127630 + translation elongation factor 1A (EF-1A/EF-Tu) COGs: COG0050 GTPase - translation elongation factors~InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160~KEGG: mta:Moth_2462 elongation factor Tu~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain protein~SPTR: Elongation factor Tu%3B~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu C-terminal domain%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0117 Toce_0118 Toce_0118 Toce_0118 127672 127980 + SSU ribosomal protein S10P COGs: COG0051 Ribosomal protein S10~InterPro IPR005731:IPR001848:IPR018268~KEGG: aac:Aaci_2712 ribosomal protein S10~PFAM: ribosomal protein S10~SPTR: Ribosomal protein S10%3B~TIGRFAM: ribosomal protein S10~PFAM: Ribosomal protein S10p/S20e~TIGRFAM: ribosomal protein S10%2C bacterial/organelle gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0118 Toce_0119 Toce_0119 Toce_0119 128004 128633 + LSU ribosomal protein L3P COGs: COG0087 Ribosomal protein L3~InterPro IPR019927:IPR000597:IPR019926~KEGG: tpd:Teth39_0374 50S ribosomal protein L3~PFAM: ribosomal protein L3~SPTR: 50S ribosomal protein L3%3B~TIGRFAM: 50S ribosomal protein L3~PFAM: Ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3%2C bacterial gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0119 Toce_0120 Toce_0120 Toce_0120 128661 129287 + LSU ribosomal protein L4P COGs: COG0088 Ribosomal protein L4~InterPro IPR002136~KEGG: aoe:Clos_0493 50S ribosomal protein L4~PFAM: ribosomal protein L4/L1e~SPTR: Ribosomal protein L4/L1e%3B~PFAM: Ribosomal protein L4/L1 family gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0120 Toce_0121 Toce_0121 Toce_0121 129284 129574 + LSU ribosomal protein L23P COGs: COG0089 Ribosomal protein L23~InterPro IPR013025:IPR001014~KEGG: aoe:Clos_0494 50S ribosomal protein L23~PFAM: Ribosomal protein L25/L23~SPTR: 50S ribosomal protein L23%3B~PFAM: Ribosomal protein L23 gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0121 Toce_0122 Toce_0122 Toce_0122 129611 130438 + LSU ribosomal protein L2P COGs: COG0090 Ribosomal protein L2~InterPro IPR002171:IPR005880~KEGG: cth:Cthe_2906 50S ribosomal protein L2~PFAM: ribosomal protein L2~SPTR: Ribosomal protein L2%3B~TIGRFAM: ribosomal protein L2~PFAM: Ribosomal Proteins L2%2C RNA binding domain%3B Ribosomal Proteins L2%2C C-terminal domain~TIGRFAM: ribosomal protein L2%2C bacterial/organellar gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0122 Toce_0123 Toce_0123 Toce_0123 130460 130744 + SSU ribosomal protein S19P COGs: COG0185 Ribosomal protein S19~InterPro IPR002222:IPR005732:IPR020934~KEGG: cth:Cthe_2907 30S ribosomal protein S19~PFAM: ribosomal protein S19/S15~SPTR: Ribosomal protein S19%3B~TIGRFAM: ribosomal protein S19~PFAM: Ribosomal protein S19~TIGRFAM: ribosomal protein S19%2C bacterial/organelle gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0123 Toce_0124 Toce_0124 Toce_0124 130770 131108 + LSU ribosomal protein L22P COGs: COG0091 Ribosomal protein L22~InterPro IPR005727:IPR001063:IPR018260~KEGG: tte:TTE2287 50S ribosomal protein L22~PFAM: ribosomal protein L22/L17~SPTR: 50S ribosomal protein L22%3B~TIGRFAM: ribosomal protein L22~PFAM: Ribosomal protein L22p/L17e~TIGRFAM: ribosomal protein L22%2C bacterial type gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0124 Toce_0125 Toce_0125 Toce_0125 131112 131804 + SSU ribosomal protein S3P COGs: COG0092 Ribosomal protein S3~InterProIPR005704:IPR008282:IPR004044:IPR001351:IPR 004087:IPR004088~KEGG: cth:Cthe_2909 SSU ribosomal protein S3P~PFAM: ribosomal protein S3- domain protein%3B Ribosomal protein S3 domain%3B KH type 2 domain protein~SMART: KH domain protein~SPTR: Ribosomal protein S3%3B~TIGRFAM: ribosomal protein S3~PFAM: KH domain%3B Ribosomal protein S3%2C C-terminal domain%3B Ribosomal protein S3%2C N-terminal domain~TIGRFAM: ribosomal protein S3%2C bacterial type gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0125 Toce_0126 Toce_0126 Toce_0126 131776 132210 + LSU ribosomal protein L16P COGs: COG0197 Ribosomal protein L16/L10E~InterPro IPR000114:IPR016180:IPR020798~KEGG: tpd:Teth39_0381 50S ribosomal protein L16~PFAM: Ribosomal protein L10e/L16~SPTR: 50S ribosomal protein L16%3B~TIGRFAM: ribosomal protein L16~PFAM: Ribosomal protein L16p/L10e~TIGRFAM: ribosomal protein L16%2C bacterial/organelle gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0126 Toce_0127 Toce_0127 Toce_0127 132200 132397 + LSU ribosomal protein L29P COGs: COG0255 Ribosomal protein L29~InterPro IPR001854:IPR018254~KEGG: tpd:Teth39_0382 50S ribosomal protein L29~PFAM: ribosomal protein L29~SPTR: Ribosomal protein L29%3B~TIGRFAM: ribosomal protein L29~PFAM: Ribosomal L29 protein~TIGRFAM: ribosomal protein L29 gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0127 Toce_0128 Toce_0128 Toce_0128 132428 132685 + SSU ribosomal protein S17P COGs: COG0186 Ribosomal protein S17~InterPro IPR019984:IPR000266:IPR019979~KEGG: tpd:Teth39_0383 30S ribosomal protein S17~PFAM: ribosomal protein S17~SPTR: 30S ribosomal protein S17%3B~TIGRFAM: 30S ribosomal protein S17~PFAM: Ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0128 Toce_0129 Toce_0129 Toce_0129 132711 133079 + LSU ribosomal protein L14P COGs: COG0093 Ribosomal protein L14~InterPro IPR005745:IPR000218:IPR019972~KEGG: adg:Adeg_1514 ribosomal protein L14~PFAM: ribosomal protein L14b/L23e~SPTR: 50S ribosomal protein L14%3B~TIGRFAM: ribosomal protein L14~PFAM: Ribosomal protein L14p/L23e~TIGRFAM: ribosomal protein L14%2C bacterial/organelle gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0129 Toce_0130 Toce_0130 Toce_0130 133093 133416 + LSU ribosomal protein L24P COGs: COG0198 Ribosomal protein L24~InterPro IPR003256:IPR005824:IPR005825~KEGG: ate:Athe_1734 ribosomal protein L24~PFAM: KOW domain protein~SMART: KOW domain protein~SPTR: Ribosomal protein L24%3B~TIGRFAM: ribosomal protein L24~PFAM: KOW motif~TIGRFAM: ribosomal protein L24%2C bacterial/organelle gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0130 Toce_0131 Toce_0131 Toce_0131 133440 133979 + LSU ribosomal protein L5P COGs: COG0094 Ribosomal protein L5~InterPro IPR002132:IPR020929~KEGG: tit:Thit_1960 ribosomal protein L5~SPTR: Ribosomal protein L5%3B~PFAM: ribosomal L5P family C-terminus%3B Ribosomal protein L5 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0131 Toce_0132 Toce_0132 Toce_0132 133995 134180 + ribosomal protein S14 COGs: COG0199 Ribosomal protein S14~InterPro IPR001209:IPR018271~KEGG: csc:Csac_2274 30S ribosomal protein S14~PFAM: ribosomal protein S14~SPTR: 30S ribosomal protein S14 type Z%3B~PFAM: Ribosomal protein S14p/S29e gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0132 Toce_0133 Toce_0133 Toce_0133 134206 134604 + SSU ribosomal protein S8P COGs: COG0096 Ribosomal protein S8~InterPro IPR000630~KEGG: adg:Adeg_1510 ribosomal protein S8~PFAM: ribosomal protein S8~SPTR: Ribosomal protein S8%3B~PFAM: Ribosomal protein S8 gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0133 Toce_0134 Toce_0134 Toce_0134 134629 135168 + LSU ribosomal protein L6P COGs: COG0097 Ribosomal protein L6P/L9E~InterPro IPR000702:IPR019906:IPR020040:IPR002358~KEGG: chy:CHY_2294 50S ribosomal protein L6~PFAM: Ribosomal protein L6%2C alpha-beta domain~SPTR: 50S ribosomal protein L6%3B~TIGRFAM: ribosomal protein L6~PFAM: Ribosomal protein L6~TIGRFAM: ribosomal protein L6%2C bacterial type gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0134 Toce_0135 Toce_0135 Toce_0135 135189 135554 + LSU ribosomal protein L18P COGs: COG0256 Ribosomal protein L18~InterPro IPR004389:IPR005484~KEGG: tit:Thit_1956 ribosomal protein L18~PFAM: ribosomal protein L18P/L5E~SPTR: Ribosomal protein L18%3B~TIGRFAM: ribosomal protein L18~PFAM: Ribosomal L18p/L5e family~TIGRFAM: ribosomal protein L18%2C bacterial type gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0135 Toce_0136 Toce_0136 Toce_0136 135572 136072 + SSU ribosomal protein S5P COGs: COG0098 Ribosomal protein S5~InterPro IPR005712:IPR013810:IPR005324:IPR018192~KEGG: afl:Aflv_0122 ribosomal protein S5~PFAM: Ribosomal protein S5 %3B ribosomal protein S5 domain protein~SPTR: Ribosomal protein S5%3B~TIGRFAM: ribosomal protein S5~PFAM: Ribosomal protein S5%2C N-terminal domain%3B Ribosomal protein S5%2C C-terminal domain~TIGRFAM: ribosomal protein S5%2C bacterial/organelle type gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0136 Toce_0137 Toce_0137 Toce_0137 136099 136539 + LSU ribosomal protein L15P COGs: COG0200 Ribosomal protein L15~InterPro IPR005749:IPR001196~KEGG: tte:TTE2273 ribosomal protein L15~SPTR: 50S ribosomal protein L15%3B~TIGRFAM: ribosomal protein L15~PFAM: Ribosomal protein L18e/L15~TIGRFAM: ribosomal protein L15%2C bacterial/organelle gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0137 Toce_0138 Toce_0138 Toce_0138 136539 137795 + protein translocase subunit secY/sec61 alpha COGs: COG0201 Preprotein translocase subunit SecY~InterPro IPR002208~KEGG: mta:Moth_2440 preprotein translocase subunit SecY~PFAM: SecY protein~SPTR: Preprotein translocase subunit secY%3B~TIGRFAM: preprotein translocase%2C SecY subunit~PFAM: eubacterial secY protein~TIGRFAM: preprotein translocase%2C SecY subunit gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0138 Toce_0139 Toce_0139 Toce_0139 137808 138458 + Adenylate kinase COGs: COG0563 Adenylate kinase and related kinase~InterPro IPR006259:IPR000850:IPR007862~KEGG: adg:Adeg_1237 adenylate kinase~PFAM: adenylate kinase%3B adenylate kinase lid domain protein~SPTR: Adenylate kinase%3B~TIGRFAM: adenylate kinase~PFAM: Adenylate kinase%2C active site lid%3B Adenylate kinase~TIGRFAM: adenylate kinases gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0139 Toce_0140 Toce_0140 Toce_0140 138458 139204 + methionine aminopeptidase%2C type I COGs: COG0024 Methionine aminopeptidase~InterPro IPR002467:IPR000994:IPR001714~KEGG: tte:TTE2270 methionine aminopeptidase~PFAM: peptidase M24~SPTR: Methionine aminopeptidase%3B~TIGRFAM: methionine aminopeptidase%2C type I~PFAM: Metallopeptidase family M24~TIGRFAM: methionine aminopeptidase%2C type I gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0140 Toce_0141 Toce_0141 Toce_0141 139217 139504 + LSU ribosomal protein L14E KEGG: cth:Cthe_2926 hypothetical protein~SPTR: Putative uncharacterized protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0141 Toce_0142 Toce_0142 Toce_0142 139524 139742 + bacterial translation initiation factor 1 (bIF-1) COGs: COG0361 Translation initiation factor 1 (IF-1)~InterPro IPR004368:IPR006196~KEGG: bcl:ABC0173 translation initiation factor IF-1~PFAM: S1 IF1 family protein~SPTR: Translation initiation factor IF-1%3B~TIGRFAM: translation initiation factor IF-1~PFAM: Translation initiation factor 1A / IF-1~TIGRFAM: translation initiation factor IF-1 gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0142 Toce_0143 Toce_0143 Toce_0143 139764 139877 + LSU ribosomal protein L36P InterPro IPR000473~KEGG: afn:Acfer_1906 ribosomal protein L36~PFAM: ribosomal protein L36~SPTR: 50S ribosomal protein L36%3B~TIGRFAM: ribosomal protein L36~PFAM: Ribosomal protein L36~TIGRFAM: ribosomal protein L36%2C bacterial type gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0143 Toce_0144 Toce_0144 Toce_0144 139893 140264 + SSU ribosomal protein S13P COGs: COG0099 Ribosomal protein S13~InterPro IPR001892:IPR019980:IPR018269~KEGG: pth:PTH_0345 30S ribosomal protein S13~PFAM: ribosomal protein S13~SPTR: 30S ribosomal protein S13%3B~TIGRFAM: 30S ribosomal protein S13~PFAM: Ribosomal protein S13/S18~TIGRFAM: 30S ribosomal protein S13 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0144 Toce_0145 Toce_0145 Toce_0145 140285 140668 + SSU ribosomal protein S11P COGs: COG0100 Ribosomal protein S11~InterPro IPR001971:IPR019981:IPR018102~KEGG: tte:TTE2265 30S ribosomal protein S11~PFAM: ribosomal protein S11~SPTR: 30S ribosomal protein S11%3B~TIGRFAM: 30S ribosomal protein S11~PFAM: Ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0145 Toce_0146 Toce_0146 Toce_0146 140698 141324 + SSU ribosomal protein S4P COGs: COG0522 Ribosomal protein S4 and related protein~InterPro IPR005709:IPR001912:IPR002942:IPR018079~KEGG: ribosomal protein S4~PFAM: ribosomal protein S4%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Ribosomal protein S4%3B~TIGRFAM: ribosomal protein S4~PFAM: Ribosomal protein S4/S9 N-terminal domain%3B S4 domain~TIGRFAM: ribosomal protein S4%2C bacterial/organelle type gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0146 Toce_0147 Toce_0147 Toce_0147 141368 142318 + DNA-directed RNA polymerase subunit alpha COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit~InterProIPR011773:IPR011261:IPR011262:IPR011260:IPR 011263~KEGG: cth:Cthe_2932 DNA-directed RNA polymerase subunit alpha~PFAM: RNA polymerase insert%3B RNA polymerase dimerisation%3B RNA polymerase alpha subunit domain protein~SMART: RNA polymerase RpoA/D/Rpb3-type~SPTR: DNA-directed RNA polymerase%2C alpha subunit%3B~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain%3B RNA polymerase Rpb3/RpoA insert domain%3B Bacterial RNA polymerase%2C alpha chain C terminal domain~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit%2C bacterial and chloroplast-type gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0147 Toce_0148 Toce_0148 Toce_0148 142334 142666 + LSU ribosomal protein L17P COGs: COG0203 Ribosomal protein L17~InterPro IPR000456~KEGG: tit:Thit_1943 ribosomal protein L17~PFAM: ribosomal protein L17~SPTR: Ribosomal protein L17%3B~TIGRFAM: ribosomal protein L17~PFAM: Ribosomal protein L17~TIGRFAM: ribosomal protein L17 gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0148 Toce_0149 Toce_0149 Toce_0149 142698 143528 + cobalt ABC transporter%2C ATPase subunit COGs: COG1122 ABC-type cobalt transport system ATPase component~InterProIPR005876:IPR003439:IPR003593:IPR017871:IPR 015856~KEGG: tte:TTE2261 cobalt transporter ATP-binding subunit~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Cobalt import ATP-binding protein CbiO 2%3B~TIGRFAM: cobalt ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Cobalt ATP-binding cassette C terminal~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0149 Toce_0150 Toce_0150 Toce_0150 143513 144376 + ABC transporter related protein COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439:IPR003593:IPR017871:IPR015856~KEGG: aoe:Clos_0524 cobalt transporter ATP-binding subunit~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter%3B Cobalt ATP-binding cassette C terminal~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0150 Toce_0151 Toce_0151 Toce_0151 144369 145166 + cobalt transport protein COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR003339~KEGG: amt:Amet_4445 cobalt transport protein~PFAM: cobalt transport protein~SPTR: Cobalt transport protein%3B~PFAM: Cobalt transport protein gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0151 Toce_0152 Toce_0152 Toce_0152 145176 145907 + tRNA pseudouridine synthase A COGs: COG0101 Pseudouridylate synthase~InterPro IPR001406:IPR020097~KEGG: cth:Cthe_2939 tRNA pseudouridine synthase A~PFAM: Pseudouridine synthase I%2C TruA%2C alpha/beta domain~SPTR: Pseudouridylate synthase%3B~TIGRFAM: tRNA pseudouridine synthase A~PFAM: tRNA pseudouridine synthase~TIGRFAM: pseudouridylate synthase I gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0152 Toce_0153 Toce_0153 Toce_0153 145967 146401 + LSU ribosomal protein L13P COGs: COG0102 Ribosomal protein L13~InterPro IPR005822:IPR005823~KEGG: adg:Adeg_0211 ribosomal protein L13~PFAM: ribosomal protein L13~SPTR: 50S ribosomal protein L13%3B~TIGRFAM: ribosomal protein L13~PFAM: Ribosomal protein L13~TIGRFAM: ribosomal protein L13%2C bacterial type gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0153 Toce_0154 Toce_0154 Toce_0154 146417 146806 + SSU ribosomal protein S9P COGs: COG0103 Ribosomal protein S9~InterPro IPR000754:IPR020574~KEGG: ate:Athe_2069 ribosomal protein S9~PFAM: ribosomal protein S9~SPTR: 30S ribosomal protein S9%3B~PFAM: Ribosomal protein S9/S16 gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0154 Toce_0155 Toce_0155 Toce_0155 146916 147836 + thioredoxin reductase (NADPH) COGs: COG0492 Thioredoxin reductase~InterPro IPR005982:IPR013027:IPR000103:IPR008255~KEGG: pth:PTH_1417 thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: Thioredoxin reductase%3B~TIGRFAM: thioredoxin reductase~PFAM: Pyridine nucleotide-disulphide oxidoreductase~TIGRFAM: thioredoxin-disulfide reductase gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0155 Toce_0156 Toce_0156 Toce_0156 148072 149283 + argininosuccinate synthase COGs: COG0137 Argininosuccinate synthase~InterPro IPR001518:IPR018223~KEGG: gyc:GYMC61_0760 argininosuccinate synthase~PFAM: argininosuccinate synthase~PRIAM: Argininosuccinate synthase~SPTR: Argininosuccinate synthase%3B~TIGRFAM: argininosuccinate synthase~PFAM: Arginosuccinate synthase~TIGRFAM: argininosuccinate synthase gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0156 Toce_0157 Toce_0157 Toce_0157 149288 150604 + argininosuccinate lyase COGs: COG0165 Argininosuccinate lyase~InterPro IPR009049:IPR000362:IPR003031:IPR020557~KEGG: sth:STH486 argininosuccinate lyase~PFAM: fumarate lyase~SPTR: Argininosuccinate lyase%3B~TIGRFAM: argininosuccinate lyase~PFAM: Lyase~TIGRFAM: argininosuccinate lyase gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0157 Toce_0158 Toce_0158 Toce_0158 150787 151842 - nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase COGs: COG2038 NaMN:DMB phosphoribosyltransferase~InterPro IPR017846:IPR003200~KEGG: dae:Dtox_3581 nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase~PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase~SPTR:Nicotinate-nucleotide/dimethylbenzimidazolepho sphoribosyltransferase%3B~TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase~PFAM: Phosphoribosyltransferase~TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0158 Toce_0159 Toce_0159 Toce_0159 152187 152450 - hypothetical protein KEGG: rcu:RCOM_2121370 sugar transporter%2C putative~SPTR: Sugar carrier protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0159 Toce_0160 Toce_0160 Toce_0160 152471 153772 - branched-chain amino acid transport system II carrier protein COGs: COG1114 Branched-chain amino acid permease~InterPro IPR004685~KEGG: ctc:CTC00787 branched-chain amino acid transport system carrier protein~PFAM: branched-chain amino acid transport system II carrier protein~SPTR: Branched-chain amino acid transport system carrier protein%3B~TIGRFAM: branched-chain amino acid transport system II carrier protein~PFAM: Branched-chain amino acid transport protein~TIGRFAM: branched-chain amino acid uptake carrier gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0160 Toce_0161 Toce_0161 Toce_0161 153980 155281 - branched-chain amino acid transport system II carrier protein COGs: COG1114 Branched-chain amino acid permease~InterPro IPR004685~KEGG: cno:NT01CX_2428 branched-chain amino acid transport system II carrier protein~PFAM: branched-chain amino acid transport system II carrier protein~SPTR: Branched-chain amino acid transport system II carrier protein%3B~TIGRFAM: branched-chain amino acid transport system II carrier protein~PFAM: Branched-chain amino acid transport protein~TIGRFAM: branched-chain amino acid uptake carrier gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0161 Toce_0162 Toce_0162 Toce_0162 155470 156360 - cation diffusion facilitator family transporter COGs: COG0053 Co/Zn/Cd cation transporter~InterPro IPR002524~KEGG: mmh:Mmah_1386 cation diffusion facilitator family transporter~PFAM: cation efflux protein~SPTR: Cation diffusion facilitator family transporter%3B~TIGRFAM: cation diffusion facilitator family transporter~PFAM: Cation efflux family~TIGRFAM: cation diffusion facilitator family transporter gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0162 Toce_0163 Toce_0163 Toce_0163 156753 157229 + GreA/GreB family elongation factor COGs: COG0782 Transcription elongation factor~InterPro IPR006359:IPR001437:IPR018151~KEGG: cth:Cthe_2897 transcription elongation factor GreA~PFAM: transcription elongation factor GreA/GreB domain protein~SPTR: Transcription elongation factor%3B~TIGRFAM: transcription elongation factor GreA~PFAM: domain%3B Transcription elongation factor%2C GreA/GreB%2C C-term~TIGRFAM: transcription elongation factor GreA gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0163 Toce_0164 Toce_0164 Toce_0164 157250 158722 + lysyl-tRNA synthetase COGs: COG1190 Lysyl-tRNA synthetase (class II)~InterProIPR002313:IPR004365:IPR004364:IPR018149:IPR 006195~KEGG: csc:Csac_0828 lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type~SPTR: Lysyl-tRNA synthetase%3B~TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: lysyl-tRNA synthetase%2C eukaryotic and non-spirochete bacterial gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0164 Toce_0165 Toce_0165 Toce_0165 164215 165573 + copper amine oxidase domain protein InterPro IPR012854~KEGG: tit:Thit_2257 copper amine oxidase domain protein~PFAM: copper amine oxidase domain protein~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain%3B Glycosyl hydrolase family 26 gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0165 Toce_0166 Toce_0166 Toce_0166 165682 165939 + SacI domain containing protein KEGG: bmy:Bm1_49675 SacI homology domain containing protein~SPTR: SacI homology domain containing protein gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0166 Toce_0167 Toce_0167 Toce_0167 171150 171311 + hypothetical protein KEGG: sth:STH872 hypothetical protein gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0167 Toce_0168 Toce_0168 Toce_0168 171344 171733 + pseudogene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0168 Toce_0169 Toce_0169 Toce_0169 171954 172544 + small GTP-binding protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR005225:IPR002917:IPR006073~KEGG: geo:Geob_2253 ferrous iron transport protein B~PFAM: GTP-binding protein HSR1-related~SPTR: Ferrous iron transport protein B%3B~TIGRFAM: small GTP-binding protein~PFAM: Ferrous iron transport protein B~TIGRFAM: small GTP-binding protein domain gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0169 Toce_0170 Toce_0170 Toce_0170 172522 173991 + Ferrous iron transport protein B domain protein COGs: COG0370 Fe2+ transport system protein B~InterPro IPR011619:IPR011642:IPR011640~KEGG: gem:GM21_2625 ferrous iron transport protein B~PFAM: Ferrous iron transport protein B domain protein%3B nucleoside recognition domain protein%3B Ferrous iron transport B domain protein~SPTR: Ferrous iron transport protein B%3B~PFAM: Ferrous iron transport protein B C terminus%3B Nucleoside recognition~TIGRFAM: ferrous iron transporter FeoB gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0170 Toce_0171 Toce_0171 Toce_0171 173993 174178 + conserved hypothetical protein KEGG: gem:GM21_2624 hypothetical protein~SPTR: Putative uncharacterized protein gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0171 Toce_0172 Toce_0172 Toce_0172 174168 174398 + FeoA family protein InterPro IPR007167~KEGG: chy:CHY_2108 FeoA family protein~PFAM: FeoA family protein~SPTR: FeoA family protein%3B~PFAM: FeoA domain gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0172 Toce_0173 Toce_0173 Toce_0173 174417 175421 - AIR synthase related protein domain protein COGs: COG0309 Hydrogenase maturation factor~InterPro IPR011854:IPR000728:IPR010918~KEGG: tit:Thit_1341 AIR synthase related protein domain protein~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein~SPTR: AIR synthase related protein domain protein%3B~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: thiamine-monophosphate kinase gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0173 Toce_0174 Toce_0174 Toce_0174 175433 175924 - protein of unknown function DUF1393 COGs: COG4720 membrane protein~KEGG: aco:Amico_1479 protein of unknown function DUF1393~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1393) gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0174 Toce_0175 Toce_0175 Toce_0175 176057 176311 + hypothetical protein SPTR: UL26 gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0175 Toce_0176 Toce_0176 Toce_0176 176305 177585 + seryl-tRNA synthetase COGs: COG0172 Seryl-tRNA synthetase~InterProIPR002317:IPR015866:IPR002314:IPR018156:IPR 006195~KEGG: tte:TTE0025 seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl-tRNA synthetase%2C class IIa-like~PRIAM: Serine--tRNA ligase~SPTR: Seryl-tRNA synthetase%3B~TIGRFAM: seryl-tRNA synthetase~PFAM: Seryl-tRNA synthetase N-terminal domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: seryl-tRNA synthetase gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0176 Toce_0177 Toce_0177 Toce_0177 177748 179223 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0177 Toce_0178 Toce_0178 Toce_0178 179345 179587 - protein of unknown function DUF1540 InterPro IPR011437~KEGG: mta:Moth_0712 hypothetical protein~PFAM: protein of unknown function DUF1540~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of Unknown Function (DUF1540) gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0178 Toce_0179 Toce_0179 Toce_0179 179727 180214 + pseudogene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0179 Toce_0180 Toce_0180 Toce_0180 180436 181236 + conserved hypothetical protein KEGG: tit:Thit_0722 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2837) gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0180 Toce_0181 Toce_0181 Toce_0181 181283 182674 - conserved hypothetical protein KEGG: oih:OB1372 hypothetical protein~SPTR: Hypothetical conserved protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0181 Toce_0182 Toce_0182 Toce_0182 183206 183991 - pseudogene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0182 Toce_0183 Toce_0183 Toce_0183 184147 184485 + transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: cth:Cthe_1112 ArsR family transcriptional regulator~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Transcriptional regulator%2C ArsR family%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0183 Toce_0184 Toce_0184 Toce_0184 184599 184919 + Arsenical resistance operon trans-acting repressor ArsD InterPro IPR010712~KEGG: amt:Amet_1829 arsenical resistance operon trans-acting repressor ArsD~PFAM: Arsenical resistance operon trans-acting repressor ArsD~SPTR: Arsenical resistance operon trans-acting repressor ArsD%3B~PFAM: Arsenical resistance operon trans-acting repressor ArsD gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0184 Toce_0185 Toce_0185 Toce_0185 184919 185806 + arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1) COGs: COG0003 ATPase involved in chromosome partitioning~InterPro IPR003348~KEGG: amt:Amet_1830 arsenite-activated ATPase ArsA~PRIAM: Arsenite-transporting ATPase~SPTR: Arsenite-activated ATPase ArsA%3B~TIGRFAM: arsenite-activated ATPase ArsA~PFAM: Anion-transporting ATPase~TIGRFAM: arsenite-activated ATPase (arsA) gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0185 Toce_0186 Toce_0186 Toce_0186 185781 186692 + arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1) COGs: COG0003 ATPase involved in chromosome partitioning~InterPro IPR003348~KEGG: amt:Amet_1831 arsenite-activated ATPase ArsA~PRIAM: Arsenite-transporting ATPase~SPTR: Arsenite-activated ATPase ArsA%3B~TIGRFAM: arsenite-activated ATPase ArsA~PFAM: Anion-transporting ATPase~TIGRFAM: arsenite-activated ATPase (arsA) gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0186 Toce_0187 Toce_0187 Toce_0187 186806 187039 + conserved hypothetical protein KEGG: amt:Amet_1832 hypothetical protein~SPTR: Putative uncharacterized protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0187 Toce_0188 Toce_0188 Toce_0188 187335 188564 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR000169:IPR017894~KEGG: chy:CHY_1117 ISChy4%2C transposase~PFAM: Integrase catalytic region~SPTR: ISChy4%2C transposase%3B~PFAM: Mu transposase%2C C-terminal%3B Integrase core domain gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0188 Toce_0189 Toce_0189 Toce_0189 188561 189331 + IstB transposition helper protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR001270:IPR003593~KEGG: chy:CHY_1116 ISChy4%2C transposition helper protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: ISChy4%2C transposition helper protein%3B~PFAM: IstB-like ATP binding protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0189 Toce_0190 Toce_0190 Toce_0190 189379 190233 - Integrase catalytic region COGs: COG2801 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: cdl:CDR20291_1072 integrase%2C catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase%2C catalytic region%3B~PFAM: Integrase core domain gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0190 Toce_0191 Toce_0191 Toce_0191 190272 190955 - transposase IS3/IS911 family protein InterPro IPR002514~KEGG: cbi:CLJ_B3075 transposase~PFAM: transposase IS3/IS911 family protein~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Transposase gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0191 Toce_0192 Toce_0192 Toce_0192 191205 192623 - glycosyltransferase COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~KEGG: mta:Moth_1831 glycosyltransferase~SPTR: Glycosyltransferase gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0192 Toce_0193 Toce_0193 Toce_0193 192917 193834 + extracellular solute-binding protein COGs: COG2998 ABC-type tungstate transport system permease component~KEGG: mta:Moth_0067 extracellular solute-binding protein~SPTR: Extracellular solute-binding protein%2C family 1 gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0193 Toce_0194 Toce_0194 Toce_0194 193853 194560 + binding-protein-dependent transport systems inner membrane component COGs: COG4662 ABC-type tungstate transport system periplasmic component~InterPro IPR000515~KEGG: gur:Gura_3543 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0194 Toce_0195 Toce_0195 Toce_0195 194547 195287 + ABC transporter related protein COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components~InterPro IPR003439:IPR003593:IPR017871~KEGG: mta:Moth_0069 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0195 Toce_0196 Toce_0196 Toce_0196 195380 195964 + SNARE associated Golgi protein-related protein COGs: COG1238 membrane protein~InterPro IPR015414~KEGG: drm:Dred_2300 hypothetical protein~PFAM: SNARE associated Golgi protein~SPTR: Putative uncharacterized protein%3B~PFAM: SNARE associated Golgi protein gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0196 Toce_0197 Toce_0197 Toce_0197 196125 197456 + S-layer domain protein InterPro IPR001119~KEGG: tit:Thit_0105 S-layer domain protein~PFAM: S-layer domain protein~SPTR: S-layer domain protein%3B~PFAM: S-layer homology domain gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0197 Toce_0198 Toce_0198 Toce_0198 197599 197772 + hypothetical protein KEGG: sth:STH3168 S-layer associated protein%2C putataive gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0198 Toce_0199 Toce_0199 Toce_0199 198351 198719 + response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789~KEGG: bcl:ABC3884 stage 0 sporulation protein F~PFAM: response regulator receiver~SMART: response regulator receiver~SPTR: Response regulator receiver protein%3B~PFAM: Response regulator receiver domain gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0199 Toce_0200 Toce_0200 Toce_0200 198745 199710 + histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003661:IPR003594:IPR004358:IPR005467~KEGG: bld:BLi00981 hypothetical protein~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SPTR: Sensor protein%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0200 Toce_0201 Toce_0201 Toce_0201 199919 201184 + transcription termination factor Rho COGs: COG1158 Transcription termination factor~InterProIPR004665:IPR011112:IPR011113:IPR000194:IPR 011129:IPR003593~KEGG: pth:PTH_2835 transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor RNA-binding%3B Rho termination factor domain protein~SMART: Cold shock protein%3B AAA ATPase~SPTR: Transcription termination factor%3B~TIGRFAM: transcription termination factor Rho~PFAM: Rho termination factor%2C N-terminal domain%3B Rho termination factor%2C RNA-binding domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: transcription termination factor Rho gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0201 Toce_0202 Toce_0202 Toce_0202 201190 201516 - MazG nucleotide pyrophosphohydrolase InterPro IPR004518~KEGG: tpd:Teth39_0442 MazG nucleotide pyrophosphohydrolase~PFAM: MazG nucleotide pyrophosphohydrolase~SPTR: MazG nucleotide pyrophosphohydrolase%3B~PFAM: MazG nucleotide pyrophosphohydrolase domain gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0202 Toce_0203 Toce_0203 Toce_0203 201513 201968 - nucleoside recognition domain protein InterPro IPR011642~KEGG: amt:Amet_1017 nucleoside recognition domain-containing protein~PFAM: nucleoside recognition domain protein~SPTR: Nucleoside recognition domain protein%3B~PFAM: Nucleoside recognition gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0203 Toce_0204 Toce_0204 Toce_0204 201983 202420 - nucleoside recognition domain protein InterPro IPR011642~KEGG: amt:Amet_1016 nucleoside recognition domain-containing protein~PFAM: nucleoside recognition domain protein~SPTR: Nucleoside recognition domain protein%3B~PFAM: Nucleoside recognition gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0204 Toce_0205 Toce_0205 Toce_0205 202765 204384 + carbon starvation protein CstA COGs: COG1966 Carbon starvation protein predicted membrane protein~InterPro IPR003706~KEGG: cbl:CLK_3760 carbon starvation protein CstA~PFAM: carbon starvation protein CstA~SPTR: Carbon starvation protein CstA%3B~PFAM: Carbon starvation protein CstA gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0205 Toce_0206 Toce_0206 Toce_0206 204462 204962 + conserved hypothetical protein KEGG: tpd:Teth39_0430 hypothetical protein~SPTR: Putative uncharacterized protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0206 Toce_0207 Toce_0207 Toce_0207 205044 206774 + signal transduction histidine kinase%2C LytS COGs: COG3275 Putative regulator of cell autolysis~InterProIPR011620:IPR003018:IPR010559:IPR003594:IPR 005467~KEGG: amt:Amet_1377 signal transduction histidine kinase%2C LytS~PFAM: histidine kinase internal region%3B 5TM Receptors of the LytS-YhcK type transmembrane region%3B GAF domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein%3B GAF domain protein~SPTR: Signal transduction histidine kinase%2C LytS%3B~PFAM: Histidine kinase%3B 5TMR of 5TMR-LYT%3B GAF domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0207 Toce_0208 Toce_0208 Toce_0208 206746 207510 + two component transcriptional regulator%2C LytTR family COGs: COG3279 Response regulator of the LytR/AlgR family~InterPro IPR001789:IPR007492~KEGG: adg:Adeg_0898 two component transcriptional regulator%2C LytTR family~PFAM: response regulator receiver%3B LytTr DNA-binding region~SMART: response regulator receiver~SPTR: Transcriptional regulator%2C LytR/AlgR family%3B~PFAM: Response regulator receiver domain%3B LytTr DNA-binding domain gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0208 Toce_0209 Toce_0209 Toce_0209 207673 207861 + ferredoxin InterPro IPR001080:IPR017900:IPR017896~KEGG: chy:CHY_1120 ferredoxin~SPTR: Ferredoxin%3B~PFAM: 4Fe-4S binding domain gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0209 Toce_0210 Toce_0210 Toce_0210 208133 209227 - D-alanine--D-alanine ligase COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein~InterProIPR005905:IPR011127:IPR011095:IPR000291:IPR 011761~KEGG: tpd:Teth39_0187 D-alanyl-alanine synthetase A~PFAM: D-alanine--D-alanine ligase domain protein~PRIAM: D-alanine--D-alanine ligase~SPTR: D-alanine/D-alanine ligase%3B~TIGRFAM: D-alanine/D-alanine ligase~PFAM: D-ala D-ala ligase C-terminus%3B D-ala D-ala ligase N-terminus~TIGRFAM: D-alanine--D-alanine ligase gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0210 Toce_0211 Toce_0211 Toce_0211 209484 209630 + SMC domain-containing protein KEGG: SMC domain-containing protein~SPTR: Putative uncharacterized protein gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0211 Toce_0212 Toce_0212 Toce_0212 209653 210072 - HEPN domain protein COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN~InterPro IPR007842~KEGG: chy:CHY_1716 nucleotidyltransferase/HEPN domain-containing protein~PFAM: HEPN domain protein~SMART: HEPN domain protein~SPTR: Nucleotidyltransferase/HEPN domain protein%3B~PFAM: HEPN domain gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0212 Toce_0213 Toce_0213 Toce_0213 210069 210560 - DNA polymerase beta domain protein region InterPro IPR002934~KEGG: chy:CHY_1716 nucleotidyltransferase/HEPN domain-containing protein~PFAM: DNA polymerase beta domain protein region~SPTR: Nucleotidyltransferase/HEPN domain protein%3B~PFAM: Nucleotidyltransferase domain gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0213 Toce_0214 Toce_0214 Toce_0214 210888 212039 + iron-containing alcohol dehydrogenase COGs: COG1454 Alcohol dehydrogenase class IV~InterPro IPR001670:IPR018211~KEGG: dda:Dd703_3240 iron-containing alcohol dehydrogenase~PFAM: iron-containing alcohol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Iron-containing alcohol dehydrogenase gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0214 Toce_0215 Toce_0215 Toce_0215 212075 213250 - flavodoxin/nitric oxide synthase COGs: COG0426 flavoprotein~InterPro IPR016440:IPR008254~KEGG: fpl:Ferp_1981 flavodoxin/nitric oxide synthase~PFAM: flavodoxin/nitric oxide synthase~SPTR: Flavodoxin/nitric oxide synthase%3B~PFAM: Metallo-beta-lactamase superfamily%3B Flavodoxin gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0215 Toce_0216 Toce_0216 Toce_0216 213262 213765 - Rubrerythrin InterPro IPR003251:IPR009040~KEGG: tye:THEYE_A1650 rubrerythrin subfamily~PFAM: Rubrerythrin~SPTR: Rubrerythrin subfamily%3B~PFAM: Rubrerythrin gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0216 Toce_0217 Toce_0217 Toce_0217 213768 215012 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG1251 NAD(P)H-nitrite reductase~InterPro IPR013027:IPR000103~KEGG: hmo:HM1_0433 nad(p)h-nitrite reductase%2C large subunit protein NirB%2C putative~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0217 Toce_0218 Toce_0218 Toce_0218 215027 215185 - Rubredoxin-type Fe(Cys)4 protein COGs: COG1773 Rubredoxin~InterPro IPR004039:IPR001052:IPR018527~KEGG: tme:Tmel_0414 rubredoxin-type Fe(Cys)4 protein~PFAM: Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubredoxin%3B~PFAM: Rubredoxin gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0218 Toce_0219 Toce_0219 Toce_0219 215533 216054 + transposase IS116/IS110/IS902 family protein InterPro IPR003346~KEGG: cpo:COPRO5265_1367 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Transposase IS116/IS110/IS902 family protein%3B~PFAM: Transposase IS116/IS110/IS902 family gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0219 Toce_0220 Toce_0220 Toce_0220 216191 216948 - pseudogene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0220 Toce_0221 Toce_0221 Toce_0221 217057 217581 + methylated-DNA/protein-cysteinemethyltransferase COGs: COG0350 Methylated DNA-protein cysteine methyltransferase~InterPro IPR014048:IPR008332:IPR001497~KEGG: tpd:Teth39_0207 methylated-DNA--protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding%3B methylguanine DNA methyltransferase ribonuclease domain protein~SPTR: Methylated-DNA--protein-cysteine methyltransferase%3B~TIGRFAM: methylated-DNA/protein-cysteine methyltransferase~PFAM: 6-O-methylguanine DNA methyltransferase%2C ribonuclease-like domain%3B 6-O-methylguanine DNA methyltransferase%2C DNA binding domain~TIGRFAM: O-6-methylguanine DNA methyltransferase gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0221 Toce_0222 Toce_0222 Toce_0222 217605 217733 + hypothetical protein KEGG: tte:TTE0062 glycosylase~SPTR: Predicted glycosylase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0222 Toce_0223 Toce_0223 Toce_0223 217866 218141 + Rubrerythrin InterPro IPR003251~KEGG: hbu:Hbut_1530 hypothetical protein~PFAM: Rubrerythrin~SPTR: Conserved archaeal protein%3B~PFAM: Rubrerythrin gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0223 Toce_0224 Toce_0224 Toce_0224 218405 219307 + Substrate-binding region of ABC-type glycine betaine transport system COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)~InterPro IPR007210~KEGG: gwc:GWCH70_0298 substrate-binding region of ABC-type glycine betaine transport system~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SPTR: Substrate-binding region of ABC-type glycine betaine transport system%3B~PFAM: Substrate binding domain of ABC-type glycine betaine transport system gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0224 Toce_0225 Toce_0225 Toce_0225 219333 220460 + glycine betaine/L-proline ABC transporter%2C ATPase subunit COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components~InterProIPR005892:IPR003439:IPR000644:IPR003593:IPR 017871~KEGG: gwc:GWCH70_0297 glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B CBS domain containing protein~SMART: AAA ATPase%3B CBS domain containing protein~SPTR: Glycine betaine/L-proline ABC transporter%2C ATPase subunit%3B~TIGRFAM: glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B CBS domain~TIGRFAM: glycine betaine/L-proline transport ATP binding subunit gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0225 Toce_0226 Toce_0226 Toce_0226 220474 221115 + binding-protein-dependent transport systems inner membrane component COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component~InterPro IPR000515~KEGG: gyc:GYMC61_1174 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0226 Toce_0227 Toce_0227 Toce_0227 221273 221614 + PAS fold domain protein InterPro IPR013767:IPR000014~KEGG: pgn:PGN_0746 hypothetical protein~PFAM: PAS fold domain protein~SMART: PAS domain containing protein~SPTR: Putative uncharacterized protein%3B~PFAM: PAS fold gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0227 Toce_0228 Toce_0228 Toce_0228 221707 222732 + coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein COGs: COG1035 Coenzyme F420-reducing hydrogenase beta subunit~InterPro IPR007525:IPR017900:IPR017896~KEGG: dps:DPPB80 related to F420H2-dehydrogenase%2C beta subunit~PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: 4Fe-4S binding domain%3B Coenzyme F420 hydrogenase/dehydrogenase%2C beta subunit C terminus gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0228 Toce_0229 Toce_0229 Toce_0229 223088 223282 + type I phosphodiesterase/nucleotide pyrophosphatase KEGG: fjo:Fjoh_0023 type I phosphodiesterase/nucleotide pyrophosphatase~SPTR: Putative uncharacterized protein gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0229 Toce_0230 Toce_0230 Toce_0230 223366 224842 - pseudogene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0230 Toce_0231 Toce_0231 Toce_0231 225510 226643 + NAD/NADP octopine/nopaline dehydrogenase COGs: COG0240 Glycerol-3-phosphate dehydrogenase~InterPro IPR004455:IPR003421~KEGG: hor:Hore_09740 NAD/NADP octopine/nopaline dehydrogenase~PFAM: NAD/NADP octopine/nopaline dehydrogenase%3B NADP oxidoreductase coenzyme F420-dependent~SPTR: NAD/NADP octopine/nopaline dehydrogenase%3B~PFAM: NAD/NADP octopine/nopaline dehydrogenase%2C alpha-helical domain%3B NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0231 Toce_0232 Toce_0232 Toce_0232 226643 228289 + cobalamin B12-binding domain protein InterPro IPR006158~KEGG: tte:TTE0924 methionine synthase I cobalamin-binding subunit~PFAM: cobalamin B12-binding domain protein~SPTR: Methionine synthase I%2C cobalamin-binding domain protein%3B~PFAM: B12 binding domain gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0232 Toce_0233 Toce_0233 Toce_0233 228332 228571 - conserved hypothetical protein KEGG: pth:PTH_2680 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: YKOF-related Family gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0233 Toce_0234 Toce_0234 Toce_0234 228590 228778 - small acid-soluble spore protein%2C H-type InterPro IPR012610~KEGG: gym:GYMC10_5313 small acid-soluble spore protein%2C H-type~PFAM: small acid-soluble spore H family protein~SPTR: Small acid-soluble spore protein%2C H-type%3B~TIGRFAM: small acid-soluble spore protein%2C H-type~PFAM: Small acid-soluble spore protein H family~TIGRFAM: small acid-soluble spore protein%2C H-type gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0234 Toce_0235 Toce_0235 Toce_0235 228916 229695 + prolipoprotein diacylglyceryl transferase COGs: COG0682 Prolipoprotein diacylglyceryltransferase~InterPro IPR001640~KEGG: tpd:Teth39_0751 prolipoprotein diacylglyceryl transferase~PFAM: prolipoprotein diacylglyceryl transferase~SPTR: Prolipoprotein diacylglyceryl transferase%3B~PFAM: Prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0235 Toce_0236 Toce_0236 Toce_0236 229817 231031 + protein of unknown function DUF819 COGs: COG5505 integral membrane protein~InterPro IPR008537~KEGG: cdl:CDR20291_1543 hypothetical protein~PFAM: protein of unknown function DUF819~SPTR: Putative membrane protein%3B~PFAM: Protein of unknown function (DUF819) gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0236 Toce_0237 Toce_0237 Toce_0237 231089 231739 - conserved hypothetical protein InterPro IPR009501~KEGG: gur:Gura_4126 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised ACR%2C YkgG family COG1556 gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0237 Toce_0238 Toce_0238 Toce_0238 232144 232716 + Protein of unknown function DUF2284%2C metal-binding protein COGs: COG5423 metal-binding protein~InterPro IPR019271~KEGG: pth:PTH_2051 hypothetical protein~PFAM: Protein of unknown function DUF2284%2C metal-binding~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted metal-binding protein (DUF2284) gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0238 Toce_0239 Toce_0239 Toce_0239 232741 234153 + copper amine oxidase domain protein COGs: COG3858 glycosyl hydrolase~InterPro IPR012854:IPR001223:IPR011583:IPR001579~KEGG: swo:Swol_1871 glycosyl hydrolase-like protein~PFAM: copper amine oxidase domain protein%3B glycoside hydrolase family 18~SMART: chitinase II~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain%3B Glycosyl hydrolases family 18 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0239 Toce_0240 Toce_0240 Toce_0240 234307 235131 + conserved hypothetical protein KEGG: tpd:Teth39_1732 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF322) gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0240 Toce_0241 Toce_0241 Toce_0241 235209 235736 + NADH dehydrogenase subunit E COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023~KEGG: csc:Csac_0619 NADH dehydrogenase (ubiquinone)%2C 24 kDa subunit~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~SPTR: NADH dehydrogenase (Ubiquinone)%2C 24 kDa subunit%3B~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0241 Toce_0242 Toce_0242 Toce_0242 235755 237506 + NADH dehydrogenase (quinone) COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterProIPR011538:IPR019554:IPR019575:IPR017900:IPR 017896~KEGG: csc:Csac_0620 NADH dehydrogenase (quinone)~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase (Quinone)%3B~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B 4Fe-4S binding domain%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0242 Toce_0243 Toce_0243 Toce_0243 237526 241146 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG3383 Uncharacterized anaerobic dehydrogenase~InterProIPR001041:IPR013027:IPR006963:IPR006656:IPR 000759:IPR017900:IPR006655:IPR017896~KEGG: aoe:Clos_0277 molybdopterin oxidoreductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B ferredoxin%3B molybdopterin oxidoreductase Fe4S4 region%3B molybdopterin oxidoreductase~SPTR: Molybdopterin oxidoreductase%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Molybdopterin oxidoreductase%3B Molybdopterin oxidoreductase Fe4S4 domain~TIGRFAM: glutamate synthase (NADPH)%2C homotetrameric gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0243 Toce_0244 Toce_0244 Toce_0244 241374 242333 + Protein of unknown function DUF2229%2C CoA enzyme activase COGs: COG3580 conserved hypothetical protein~InterPro IPR018709~KEGG: nth:Nther_0109 hypothetical protein~PFAM: Protein of unknown function DUF2229%2C CoA enzyme activase~SPTR: Putative uncharacterized protein%3B~PFAM: CoA enzyme activase uncharacterised domain (DUF2229) gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0244 Toce_0245 Toce_0245 Toce_0245 242330 243466 + conserved hypothetical protein COGs: COG3581 conserved hypothetical protein~KEGG: pth:PTH_1326 hypothetical protein~SPTR: Uncharacterized protein conserved in bacteria gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0245 Toce_0246 Toce_0246 Toce_0246 243444 244409 + CoA-substrate-specific enzyme activase COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)~InterPro IPR008275:IPR002731~KEGG: chy:CHY_1411 CoA-substrate-specific enzyme activase domain-containing protein~PFAM: ATPase BadF/BadG/BcrA/BcrD type~SPTR: CoA-substrate-specific enzyme activase domain protein%3B~TIGRFAM: CoA-substrate-specific enzyme activase~PFAM: BadF/BadG/BcrA/BcrD ATPase family~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0246 Toce_0247 Toce_0247 Toce_0247 244406 245053 - 2%2C3-diketo-5-methylthio-1-phosphopentanephosphat ase COGs: COG4359 conserved hypothetical protein~InterPro IPR006384:IPR006383:IPR005834~KEGG: pth:PTH_0926 hypothetical protein~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: Uncharacterized conserved protein%3B~TIGRFAM: 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase-like)~PFAM: Putative Phosphatase~TIGRFAM: Haloacid Dehalogenase superfamily%2C subfamily IB%2C phosphoserine phosphatase-like%3B 2%2C3-diketo-5-methylthio-1-phosphopentane phosphatase gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0247 Toce_0248 Toce_0248 Toce_0248 245310 246134 + DNA end-binding protein Ku COGs: COG1273 conserved hypothetical protein~InterPro IPR009187:IPR006164~KEGG: tit:Thit_1867 Ku protein~PFAM: Ku domain protein~SMART: Ku domain protein~SPTR: Ku protein%3B~TIGRFAM: Ku protein~PFAM: Ku70/Ku80 beta-barrel domain~TIGRFAM: Ku protein%2C prokaryotic gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0248 Toce_0249 Toce_0249 Toce_0249 246129 247055 - ATP dependent DNA ligase COGs: COG1793 ATP-dependent DNA ligase~InterPro IPR012310:IPR016059~KEGG: swo:Swol_1123 DNA ligase%2C putative~PFAM: ATP dependent DNA ligase~SPTR: DNA ligase%2C putative%3B~PFAM: ATP dependent DNA ligase domain%3B ATP dependent DNA ligase C terminal region~TIGRFAM: DNA polymerase LigD%2C ligase domain gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0249 Toce_0250 Toce_0250 Toce_0250 247163 248056 + DNA polymerase LigD%2C polymerase domain protein COGs: COG3285 eukaryotic-type DNA primase~InterPro IPR014145:IPR002755~KEGG: swo:Swol_1124 hypothetical protein~PFAM: DNA primase small subunit~SPTR: Putative uncharacterized protein%3B~TIGRFAM: DNA polymerase LigD%2C polymerase domain protein~TIGRFAM: DNA ligase D%3B DNA polymerase LigD%2C polymerase domain gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0250 Toce_0251 Toce_0251 Toce_0251 248193 249260 + fumarate reductase/succinate dehydrogenase flavoprotein domain protein COGs: COG0644 Dehydrogenase (flavoprotein)~InterPro IPR003953:IPR003042~KEGG: nth:Nther_1774 FAD dependent oxidoreductase~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~SPTR: FAD dependent oxidoreductase%3B~PFAM: FAD binding domain gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0251 Toce_0252 Toce_0252 Toce_0252 249347 249781 + FHA domain containing protein COGs: COG1716 FOG: FHA domain~InterPro IPR000253~KEGG: tit:Thit_1769 FHA domain containing protein~PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~SPTR: FHA domain containing protein%3B~PFAM: FHA domain gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0252 Toce_0253 Toce_0253 Toce_0253 249753 250985 + cell cycle protein COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182~KEGG: tpd:Teth39_0572 cell cycle protein~PFAM: cell cycle protein~SPTR: Cell cycle protein%3B~PFAM: Cell cycle protein gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0253 Toce_0254 Toce_0254 Toce_0254 250969 252378 + Peptidoglycan glycosyltransferase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR001460~KEGG: tte:TTE1967 cell division protein FtsI/penicillin-binding protein 2~PFAM: penicillin-binding protein transpeptidase~PRIAM: Peptidoglycan glycosyltransferase~SPTR: Penicillin-binding protein transpeptidase%3B~PFAM: Penicillin binding protein transpeptidase domain gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0254 Toce_0255 Toce_0255 Toce_0255 252419 253300 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: aco:Amico_1276 protein of unknown function DUF6 transmembrane~PFAM: protein of unknown function DUF6 transmembrane~SPTR: Permeases of the drug/metabolite transporter (DMT) superfamily%3B~PFAM: EamA-like transporter family gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0255 Toce_0256 Toce_0256 Toce_0256 253372 254343 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439:IPR003593:IPR017871~KEGG: tex:Teth514_0329 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter%2C ATP-binding protein%2C putative%3B~PFAM: ABC transporter gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0256 Toce_0257 Toce_0257 Toce_0257 254315 255106 + pseudogene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0257 Toce_0258 Toce_0258 Toce_0258 255133 256155 + NADH:flavin oxidoreductase/NADH oxidase COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family~InterPro IPR001155~KEGG: aoe:Clos_0391 NADH:flavin oxidoreductase/NADH oxidase~PFAM: NADH:flavin oxidoreductase/NADH oxidase~SPTR: NADH:flavin oxidoreductase/NADH oxidase%3B~manually curated~PFAM: NADH:flavin oxidoreductase / NADH oxidase family gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0258 Toce_0259 Toce_0259 Toce_0259 256152 256808 + HhH-GPD family protein COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase~InterPro IPR003265~KEGG: bha:BH1749 DNA-3-methyladenine glycosidase~PFAM: HhH-GPD family protein~SMART: HhH-GPD family protein~SPTR: DNA-3-methyladenine glycosidase%3B~PFAM: HhH-GPD superfamily base excision DNA repair protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0259 Toce_0260 Toce_0260 Toce_0260 256901 257929 + tryptophanyl-tRNA synthetase COGs: COG0180 Tryptophanyl-tRNA synthetase~InterPro IPR002306:IPR002305:IPR001412~KEGG: cce:Ccel_1411 tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib~PRIAM: Tryptophan--tRNA ligase~SPTR: Tryptophanyl-tRNA synthetase%3B~TIGRFAM: tryptophanyl-tRNA synthetase~PFAM: tRNA synthetases class I (W and Y)~TIGRFAM: tryptophanyl-tRNA synthetase gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0260 Toce_0261 Toce_0261 Toce_0261 257977 258471 + conserved hypothetical protein KEGG: tit:Thit_0279 hypothetical protein~SPTR: Putative uncharacterized protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0261 Toce_0262 Toce_0262 Toce_0262 258476 259066 + pseudogene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0262 Toce_0263 Toce_0263 Toce_0263 259193 259912 + pseudogene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0263 Toce_0264 Toce_0264 Toce_0264 260053 262011 + transcriptional antiterminator%2C BglG COGs: COG3711 Transcriptional antiterminator~InterPro IPR007737:IPR011608:IPR002178:IPR013011~KEGG: cdf:CD3083 transcription antiterminator~PFAM: PRD domain protein%3B M trans-acting positive regulator%3B phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: Putative uncharacterized protein%3B~PFAM: HTH domain%3B Mga helix-turn-helix domain%3B PRD domain%3B Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0264 Toce_0265 Toce_0265 Toce_0265 262145 262453 + phosphotransferase system PTS lactose/cellobiose-specific IIA subunit COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA~InterPro IPR003188~KEGG: tte:TTE0336 phosphotransferase system cellobiose-specific component IIA~PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit~SPTR: Phosphotransferase system cellobiose-specific component IIA%3B~PFAM: PTS system%2C Lactose/Cellobiose specific IIA subunit gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0265 Toce_0266 Toce_0266 Toce_0266 262494 263441 + N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase COGs: COG1446 Asparaginase~InterPro IPR000246~KEGG: cdl:CDR20291_0138 glycosylasparaginase~PFAM: peptidase T2 asparaginase 2~PRIAM:N(4)-(beta-N-acetylglucosaminyl)-L-asparagina se~SPTR: Glycosylasparaginase%3B~PFAM: Asparaginase gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0266 Toce_0267 Toce_0267 Toce_0267 263554 264888 + PTS system%2C lactose/cellobiose family IIC subunit COGs: COG1455 Phosphotransferase system cellobiose-specific component IIC~InterPro IPR004501:IPR003352~KEGG: ent:Ent638_2981 PTS system lactose/cellobiose family IIC subunit~PFAM: phosphotransferase system EIIC~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: PTS family oligomeric beta-glucoside porter component IIC%3B~TIGRFAM: PTS system%2C lactose/cellobiose family IIC subunit~PFAM: Phosphotransferase system%2C EIIC~TIGRFAM: phosphotransferase system%2C cellobiose specific%2C IIC component%3B PTS system%2C lactose/cellobiose family IIC component gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0267 Toce_0268 Toce_0268 Toce_0268 264906 265598 + CutC family protein COGs: COG3142 Uncharacterized protein involved in copper resistance~InterPro IPR005627~KEGG: cbt:CLH_0683 copper homeostasis protein CutC~PFAM: CutC family protein~SPTR: Copper homeostasis protein CutC%3B~PFAM: CutC family gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0268 Toce_0269 Toce_0269 Toce_0269 265595 265903 + phosphotransferase system lactose/cellobiose-specific IIB subunit COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB~InterPro IPR003501:IPR013012~KEGG: tai:Taci_0332 phosphotransferase system lactose/cellobiose-specific IIB subunit~PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit~SPTR: Phosphotransferase system lactose/cellobiose-specific IIB subunit%3B~PFAM: PTS system%2C Lactose/Cellobiose specific IIB subunit~TIGRFAM: PTS system%2C lactose/cellobiose family IIB component gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0269 Toce_0270 Toce_0270 Toce_0270 266119 266811 + metal-dependent hydrolase COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold~KEGG: pth:PTH_1415 metal-dependent hydrolase~SPTR: UPF0173 metal-dependent hydrolase PTH_1415%3B~PFAM: Metallo-beta-lactamase superfamily gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0270 Toce_0271 Toce_0271 Toce_0271 266818 268080 - major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: dge:Dgeo_1065 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0271 Toce_0272 Toce_0272 Toce_0272 268243 269475 + molybdopterin molybdochelatase COGs: COG0303 Molybdopterin biosynthesis enzyme~InterProIPR020817:IPR005110:IPR001453:IPR005111:IPR 008284~KEGG: pth:PTH_2617 molybdopterin biosynthesis enzyme~PFAM: MoeA domain protein domain I and II%3B molybdopterin binding domain%3B MoeA domain protein domain IV~SPTR: Molybdopterin biosynthesis enzyme%3B~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II)%3B MoeA C-terminal region (domain IV)~TIGRFAM: molybdenum cofactor synthesis domain gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0272 Toce_0273 Toce_0273 Toce_0273 269490 271415 + molybdopterin molybdochelatase COGs: COG0303 Molybdopterin biosynthesis enzyme~InterProIPR020817:IPR005110:IPR001453:IPR005111:IPR 008284~KEGG: nth:Nther_0447 molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain%3B MoeA domain protein domain I and II%3B MoeA domain protein domain IV~SPTR: Molybdenum cofactor synthesis domain protein%3B~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: Probable molybdopterin binding domain%3B MoeA N-terminal region (domain I and II)%3B MoeA C-terminal region (domain IV)~TIGRFAM: molybdenum cofactor synthesis domain gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0273 Toce_0274 Toce_0274 Toce_0274 271416 272390 + GTP cyclohydrolase subunit MoaA COGs: COG2896 Molybdenum cofactor biosynthesis protein~InterProIPR013483:IPR007197:IPR010505:IPR006638:IPR 000385~KEGG: pth:PTH_2623 molybdenum cofactor biosynthesis enzyme~PFAM: molybdenum cofactor synthesis domain protein%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Molybdenum cofactor biosynthesis protein A%3B~TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: Molybdenum Cofactor Synthesis C%3B Radical SAM superfamily~TIGRFAM: molybdenum cofactor biosynthesis protein A%2C bacterial gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0274 Toce_0275 Toce_0275 Toce_0275 272393 272887 + GTP cyclohydrolase subunit MoaC COGs: COG0315 Molybdenum cofactor biosynthesis enzyme~InterPro IPR002820~KEGG: chy:CHY_0803 molybdenum cofactor biosynthesis protein C~PFAM: molybdopterin cofactor biosynthesis MoaC region~SPTR: Molybdenum cofactor biosynthesis protein C%3B~TIGRFAM: molybdenum cofactor biosynthesis protein C~PFAM: MoaC family~TIGRFAM: molybdenum cofactor biosynthesis protein MoaC gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0275 Toce_0276 Toce_0276 Toce_0276 272875 273801 + molybdenum cofactor synthesis domain protein COGs: COG0521 Molybdopterin biosynthesis protein~InterPro IPR020817:IPR005302:IPR001453:IPR008284~KEGG: ddf:DEFDS_0070 hypothetical protein~PFAM: molybdopterin binding domain%3B MOSC domain containing protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MOSC domain%3B Probable molybdopterin binding domain~TIGRFAM: molybdenum cofactor synthesis domain gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0276 Toce_0277 Toce_0277 Toce_0277 274127 274411 + Chaperonin Cpn10 COGs: COG0234 Co-chaperonin GroES (HSP10)~InterPro IPR020818:IPR001476:IPR018369~KEGG: tit:Thit_0563 chaperonin Cpn10~PFAM: Chaperonin Cpn10~SPTR: 10 kDa chaperonin%3B~PFAM: Chaperonin 10 Kd subunit gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0277 Toce_0278 Toce_0278 Toce_0278 274436 276046 + chaperonin GroEL COGs: COG0459 Chaperonin GroEL (HSP60 family)~InterPro IPR001844:IPR002423:IPR018370~KEGG: tpd:Teth39_1721 chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~SPTR: 60 kDa chaperonin%3B~TIGRFAM: chaperonin GroEL~PFAM: TCP-1/cpn60 chaperonin family~TIGRFAM: chaperonin GroL gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0278 Toce_0279 Toce_0279 Toce_0279 276217 276651 - conserved hypothetical protein COGs: COG2764 conserved hypothetical protein~KEGG: cth:Cthe_0331 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0279 Toce_0280 Toce_0280 Toce_0280 276838 278361 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0280 Toce_0281 Toce_0281 Toce_0281 278355 279086 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0281 Toce_0282 Toce_0282 Toce_0282 279318 279650 - conserved hypothetical protein KEGG: aoe:Clos_2296 hypothetical protein~SPTR: Putative uncharacterized protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0282 Toce_0283 Toce_0283 Toce_0283 280010 280330 + hypothetical protein KEGG: ppp:PHYPADRAFT_234441 hypothetical protein~SPTR: CheA signal transduction histidine kinase gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0283 Toce_0284 Toce_0284 Toce_0284 280418 280759 + conserved hypothetical protein KEGG: mta:Moth_1581 hypothetical protein~SPTR: Putative uncharacterized protein gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0284 Toce_0285 Toce_0285 Toce_0285 280987 281688 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: dae:Dtox_2625 two component transcriptional regulator%2C winged helix family~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0285 Toce_0286 Toce_0286 Toce_0286 281685 283136 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR003660:IPR003661:IPR003594:IPR004358:IPR 005467~KEGG: dae:Dtox_2624 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SPTR: Sensor protein%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0286 Toce_0287 Toce_0287 Toce_0287 283269 284456 + TPR repeat-containing protein InterPro IPR001440:IPR019734:IPR013026~KEGG: dae:Dtox_2626 TPR repeat-containing protein~PFAM: TPR repeat-containing protein~SPTR: TPR repeat-containing protein%3B~PFAM: Tetratricopeptide repeat gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0287 Toce_0288 Toce_0288 Toce_0288 284580 285686 + Methicillin resistance protein COGs: COG2348 Uncharacterized protein involved in methicillin resistance~InterPro IPR003447~KEGG: mta:Moth_2408 methicillin resistance protein~PFAM: Methicillin resistance protein~SPTR: Methicillin resistance protein%3B~PFAM: FemAB family gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0288 Toce_0289 Toce_0289 Toce_0289 285686 286840 + alanine racemase COGs: COG0787 Alanine racemase~InterPro IPR000821:IPR001608:IPR011079:IPR020622~KEGG: nth:Nther_0307 alanine racemase~PFAM: alanine racemase domain protein~PRIAM: Alanine racemase~SPTR: Alanine racemase%3B~TIGRFAM: alanine racemase~PFAM: Alanine racemase%2C C-terminal domain%3B Alanine racemase%2C N-terminal domain~TIGRFAM: alanine racemase gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0289 Toce_0290 Toce_0290 Toce_0290 287010 287467 - pseudogene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0290 Toce_0291 Toce_0291 Toce_0291 287627 287782 - hypothetical protein gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0291 Toce_0292 Toce_0292 Toce_0292 288424 291060 + PTS system transcriptional activator COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain~InterProIPR002078:IPR011608:IPR004701:IPR003593:IPR 002464~KEGG: cbk:CLL_A3361 transcriptional regulatory protein LevR~PFAM: sigma-54 factor interaction domain-containing protein%3B PRD domain protein%3B PTS system fructose subfamily IIA component~SMART: AAA ATPase~SPTR: PTS system transcriptional activator%3B~PFAM: PTS system fructose IIA component%3B Sigma-54 interaction domain%3B PRD domain gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0292 Toce_0293 Toce_0293 Toce_0293 291298 292350 + Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterPro IPR013154:IPR013149:IPR002328~KEGG: cdf:CD0490 putative sugar-phosphate dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: Putative sugar-phosphate dehydrogenase%3B~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0293 Toce_0294 Toce_0294 Toce_0294 292409 292843 + PTS system fructose subfamily IIA component COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA~InterPro IPR004701~KEGG: cbk:CLL_A3360 PTS system fructose IIA component~PFAM: PTS system fructose subfamily IIA component~SPTR: PTS system fructose subfamily IIA component%3B~PFAM: PTS system fructose IIA component~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIA component gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0294 Toce_0295 Toce_0295 Toce_0295 292862 293338 + Protein-N(pi)-phosphohistidine--sugarphosphotran sferase COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB~InterPro IPR004720:IPR000209~KEGG: cbk:CLL_A3359 PTS system sorbose subfamily IIB component~PFAM: PTS system sorbose subfamily IIB component~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: Protein-N(Pi)-phosphohistidine--sugar phosphotransferase%3B~PFAM: PTS system sorbose subfamily IIB component~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIB component gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0295 Toce_0296 Toce_0296 Toce_0296 293419 294642 - transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: pth:PTH_2606 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Hypothetical transposase%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0296 Toce_0297 Toce_0297 Toce_0297 294957 295912 + pseudogene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0297 Toce_0298 Toce_0298 Toce_0298 296028 297551 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0298 Toce_0299 Toce_0299 Toce_0299 297545 298276 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0299 Toce_0300 Toce_0300 Toce_0300 298336 299043 + PTS system IID component%2C Man family (TC 4.A.6) COGs: COG3716 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IID~InterPro IPR004704~KEGG: cbk:CLL_A3357 PTS system mannose/fructose/sorbose family IID component~PFAM: PTS system mannose/fructose/sorbose family IID component~SPTR: PTS system mannose/fructose/sorbose family IID component%3B~PFAM: PTS system mannose/fructose/sorbose family IID component gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0300 Toce_0301 Toce_0301 Toce_0301 299081 299821 - 2-phosphosulfolactate phosphatase COGs: COG2045 Phosphosulfolactate phosphohydrolase~InterPro IPR005238~KEGG: cac:CAC3233 2-phosphosulfolactate phosphatase~PFAM: 2-phosphosulfolactate phosphatase~SPTR: Probable 2-phosphosulfolactate phosphatase%3B~TIGRFAM: 2-phosphosulfolactate phosphatase~PFAM: 2-phosphosulpholactate phosphatase~TIGRFAM: 2-phosphosulfolactate phosphatase gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0301 Toce_0302 Toce_0302 Toce_0302 299865 300398 - DNA polymerase beta domain protein region InterPro IPR002934:IPR007842~KEGG: pth:PTH_0436 hypothetical protein~PFAM: DNA polymerase beta domain protein region%3B HEPN domain protein~SPTR: Hypothetical membrane protein%3B~PFAM: Nucleotidyltransferase domain gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0302 Toce_0303 Toce_0303 Toce_0303 300471 301643 - Integrase catalytic region InterPro IPR001584~KEGG: adg:Adeg_0459 integrase catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0303 Toce_0304 Toce_0304 Toce_0304 302135 302869 + cobalamin biosynthesis protein CbiM COGs: COG0310 ABC-type Co2+ transport system permease component~InterPro IPR018024:IPR002751~KEGG: tit:Thit_0368 cobalamin biosynthesis protein CbiM~PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein~SPTR: Cobalamin biosynthesis protein CbiM%3B~TIGRFAM: cobalamin biosynthesis protein CbiM~PFAM: Cobalt uptake substrate-specific transmembrane region~TIGRFAM: cobalamin biosynthesis protein CbiM gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0304 Toce_0305 Toce_0305 Toce_0305 302856 303143 + cobalt transport protein CbiN COGs: COG1930 ABC-type cobalt transport system periplasmic component~InterPro IPR000209~KEGG: tit:Thit_0369 cobalt transport protein CbiN~SPTR: Cobalt transport protein CbiN%3B~PFAM: Cobalt transport protein component CbiN~TIGRFAM: cobalt transport protein gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0305 Toce_0306 Toce_0306 Toce_0306 303145 303852 + cobalt ABC transporter%2C inner membrane subunit CbiQ COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR012809:IPR003339~KEGG: tit:Thit_0370 cobalt ABC transporter%2C inner membrane subunit CbiQ~PFAM: cobalt transport protein~SPTR: Cobalt ABC transporter%2C inner membrane subunit CbiQ%3B~TIGRFAM: cobalt ABC transporter%2C inner membrane subunit CbiQ~PFAM: Cobalt transport protein~TIGRFAM: cobalt ABC transporter%2C permease protein CbiQ gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0306 Toce_0307 Toce_0307 Toce_0307 303854 304687 + cobalt ABC transporter%2C ATPase subunit COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR005876:IPR003439:IPR003593:IPR017871~KEGG: tpd:Teth39_1883 cobalt ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Cobalt ABC transporter%2C ATPase subunit%3B~TIGRFAM: cobalt ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0307 Toce_0308 Toce_0308 Toce_0308 304690 306087 + hydrogenobyrinic acid a%2Cc-diamide synthase (glutamine-hydrolysing) %3Bcobyrinate a%2Cc-diamide synthase COGs: COG1797 Cobyrinic acid a c-diamide synthase~InterPro IPR004484:IPR011698:IPR017929~KEGG: tit:Thit_0342 cobyrinic acid a%2Cc-diamide synthase~PFAM: CobB/CobQ domain protein glutamine amidotransferase~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~TIGRFAM: cobyrinic acid a%2Cc-diamide synthase~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: cobyrinic acid a%2Cc-diamide synthase gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0308 Toce_0309 Toce_0309 Toce_0309 306084 306458 + cobalamin (vitamin B12) biosynthesis CbiX protein COGs: COG2138 conserved hypothetical protein~InterPro IPR002762~KEGG: tit:Thit_0350 cobalamin (vitamin B12) biosynthesis CbiX protein~PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein~SPTR: Cobalamin (Vitamin B12) biosynthesis CbiX protein%3B~PFAM: CbiX gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0309 Toce_0310 Toce_0310 Toce_0310 306475 307125 + precorrin-8X methylmutase COGs: COG2082 Precorrin isomerase~InterPro IPR003722~KEGG: tit:Thit_0351 precorrin-8X methylmutase~PFAM: Precorrin-8X methylmutase CbiC/CobH~PRIAM: Precorrin-8X methylmutase~SPTR: Precorrin-8X methylmutase CbiC/CobH%3B~PFAM: Precorrin-8X methylmutase gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0310 Toce_0311 Toce_0311 Toce_0311 307118 308215 + cobalamin biosynthesis protein CbiD COGs: COG1903 Cobalamin biosynthesis protein CbiD~InterPro IPR002748:IPR018254~KEGG: tit:Thit_0352 cobalamin biosynthesis protein CbiD~PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein~SPTR: Cobalamin biosynthesis protein CbiD%3B~TIGRFAM: cobalamin biosynthesis protein CbiD~PFAM: CbiD~TIGRFAM: cobalamin biosynthesis protein CbiD gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0311 Toce_0312 Toce_0312 Toce_0312 308209 308850 + precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit COGs: COG2241 Precorrin-6B methylase 1~InterPro IPR012818:IPR000878:IPR019809~KEGG: tit:Thit_0353 precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~SPTR: Precorrin-6y C5%2C15-methyltransferase (Decarboxylating)%2C CbiE subunit%3B~TIGRFAM: precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0312 Toce_0313 Toce_0313 Toce_0313 308808 309416 + precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit COGs: COG2242 Precorrin-6B methylase 2~InterPro IPR014008:IPR004398:IPR020596~KEGG: tit:Thit_0354 precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit~PFAM: conserved hypothetical protein~SPTR: Precorrin-6Y C5%2C15-methyltransferase (Decarboxylating)%2C CbiT subunit%3B~TIGRFAM: precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit~PFAM: Met-10+ like-protein~TIGRFAM: precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0313 Toce_0314 Toce_0314 Toce_0314 309416 310105 + precorrin-2 C20-methyltransferase COGs: COG2243 Precorrin-2 methylase~InterPro IPR012382:IPR006364:IPR000878~KEGG: tex:Teth514_0312 precorrin-2 C20-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~SPTR: Precorrin-2 C20-methyltransferase%3B~TIGRFAM: precorrin-2 C20-methyltransferase~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-2 C20-methyltransferase gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0314 Toce_0315 Toce_0315 Toce_0315 310102 310854 + precorrin-4 C11-methyltransferase COGs: COG2875 Precorrin-4 methylase~InterPro IPR006362:IPR000878:IPR003043~KEGG: tex:Teth514_0313 precorrin-4 C11-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~PRIAM: Precorrin-4 C(11)-methyltransferase~SPTR: Precorrin-4 C11-methyltransferase%3B~TIGRFAM: precorrin-4 C11-methyltransferase~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-4 C11-methyltransferase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0315 Toce_0316 Toce_0316 Toce_0316 310851 311897 + cobalamin (vitamin B12) biosynthesis CbiG protein COGs: COG2073 Cobalamin biosynthesis protein CbiG~InterPro IPR002750~KEGG: tit:Thit_0357 cobalamin (vitamin B12) biosynthesis CbiG protein~PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein~SPTR: Cobalamin (Vitamin B12) biosynthesis CbiG protein%3B~PFAM: Cobalamin biosynthesis central region%3B Cobalamin synthesis G C-terminus%3B Cobalamin synthesis G N-terminal gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0316 Toce_0317 Toce_0317 Toce_0317 311894 312625 + precorrin-3 methyltransferase COGs: COG1010 Precorrin-3B methylase~InterPro IPR006363:IPR000878~KEGG: tit:Thit_0358 precorrin-3B C17-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~SPTR: Precorrin-3B C17-methyltransferase%3B~TIGRFAM: precorrin-3B C17-methyltransferase~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases~TIGRFAM: precorrin-3B C17-methyltransferase gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0317 Toce_0318 Toce_0318 Toce_0318 312622 313380 + precorrin-6x reductase COGs: COG2099 Precorrin-6x reductase~InterPro IPR003723~KEGG: tit:Thit_0359 precorrin-6x reductase~PFAM: Precorrin-6x reductase CbiJ/CobK~SPTR: Precorrin-6x reductase%3B~TIGRFAM: precorrin-6x reductase~PFAM: Precorrin-6x reductase CbiJ/CobK~TIGRFAM: precorrin-6x reductase gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0318 Toce_0319 Toce_0319 Toce_0319 313364 314629 + glutamyl-tRNA reductase COGs: COG0373 Glutamyl-tRNA reductase~InterPro IPR018214:IPR000343:IPR015895:IPR006151~KEGG: tit:Thit_0360 glutamyl-tRNA reductase~PFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like%3B Shikimate/quinate 5-dehydrogenase~SPTR: Glutamyl-tRNA reductase%3B~TIGRFAM: glutamyl-tRNA reductase~PFAM: Shikimate / quinate 5-dehydrogenase%3B Glutamyl-tRNAGlu reductase%2C N-terminal domain%3B Glutamyl-tRNAGlu reductase%2C dimerisation domain~TIGRFAM: glutamyl-tRNA reductase gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0319 Toce_0320 Toce_0320 Toce_0320 314613 315512 + hydroxymethylbilane synthase COGs: COG0181 Porphobilinogen deaminase~InterPro IPR000860~KEGG: dal:Dalk_4010 porphobilinogen deaminase~PFAM: Porphobilinogen deaminase~PRIAM: Hydroxymethylbilane synthase~SPTR: Porphobilinogen deaminase%3B~TIGRFAM: porphobilinogen deaminase~manually curated~PFAM: Porphobilinogen deaminase%2C C-terminal domain%3B Porphobilinogen deaminase%2C dipyromethane cofactor binding domain~TIGRFAM: porphobilinogen deaminase gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0320 Toce_0321 Toce_0321 Toce_0321 315493 317058 + uroporphyrinogen-III C-methyltransferase %3Buroporphyrinogen-III synthase COGs: COG0007 Uroporphyrinogen-III methylase~InterPro IPR003043:IPR006366:IPR000878:IPR003754~KEGG: tex:Teth514_0319 uroporphyrin-III C-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase%3B Uroporphyrinogen III synthase HEM4~SPTR: Uroporphyrin-III C-methyltransferase%3B~TIGRFAM: uroporphyrin-III C-methyltransferase~PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases%3B Uroporphyrinogen-III synthase HemD~TIGRFAM: uroporphyrin-III C-methyltransferase gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0321 Toce_0322 Toce_0322 Toce_0322 317021 317995 + porphobilinogen synthase COGs: COG0113 Delta-aminolevulinic acid dehydratase~InterPro IPR001731~KEGG: tpd:Teth39_1889 delta-aminolevulinic acid dehydratase~PFAM: delta-aminolevulinic acid dehydratase~PRIAM: Porphobilinogen synthase~SPTR: Delta-aminolevulinic acid dehydratase%3B~PFAM: Delta-aminolevulinic acid dehydratase gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0322 Toce_0323 Toce_0323 Toce_0323 317977 319851 + glutamate-1-semialdehyde-2%2C1-aminomutase COGs: COG0001 Glutamate-1-semialdehyde aminotransferase~InterPro IPR005814:IPR006367:IPR004639~KEGG: tex:Teth514_0321 glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: aminotransferase class-III~SPTR: Glutamate-1-semialdehyde-2%2C1-aminomutase%3B~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase%3B siroheme synthase~PFAM: Aminotransferase class-III~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase%3B siroheme synthase%2C N-terminal domain gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0323 Toce_0324 Toce_0324 Toce_0324 320086 321876 + amine oxidase COGs: COG1231 Monoamine oxidase~InterPro IPR002937~KEGG: cbe:Cbei_4105 amine oxidase~PFAM: amine oxidase~SPTR: Amine oxidase%3B~PFAM: Flavin containing amine oxidoreductase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0324 Toce_0325 Toce_0325 Toce_0325 321949 322656 + transcriptional regulator%2C GntR family COGs: COG2188 Transcriptional regulators~InterPro IPR000524:IPR011663~KEGG: gwc:GWCH70_2215 transcriptional regulator%2C GntR family~PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B UTRA domain gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0325 Toce_0326 Toce_0326 Toce_0326 322675 323406 + glucosamine-6-phosphate isomerase COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase~InterPro IPR018321:IPR018322:IPR006148~KEGG: tex:Teth514_1433 glucosamine-6-phosphate deaminase~PFAM: glucosamine/galactosamine-6-phosphate isomerase~SPTR: Glucosamine-6-phosphate isomerase%3B~TIGRFAM: glucosamine-6-phosphate isomerase~PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase~TIGRFAM: glucosamine-6-phosphate isomerase gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0326 Toce_0327 Toce_0327 Toce_0327 323453 324628 + N-acetylglucosamine-6-phosphate deacetylase COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase~InterPro IPR003764:IPR006680~KEGG: tte:TTE0232 N-acetylglucosamine-6-phosphate deacetylase~PFAM: amidohydrolase~PRIAM: N-acetylglucosamine-6-phosphate deacetylase~SPTR: N-acetylglucosamine-6-phosphate deacetylase%3B~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase~PFAM: Amidohydrolase family~TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0327 Toce_0328 Toce_0328 Toce_0328 324647 325600 - protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: tpd:Teth39_0296 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: Putative uncharacterized protein%3B~PFAM: EamA-like transporter family gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0328 Toce_0329 Toce_0329 Toce_0329 325832 326200 + transcriptional repressor%2C CopY family COGs: COG3682 transcriptional regulator protein~InterPro IPR005650~KEGG: cbe:Cbei_1062 CopY family transcriptional regulator~PFAM: Penicillinase repressor~SPTR: Transcriptional repressor%2C CopY family%3B~PFAM: Penicillinase repressor gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0329 Toce_0330 Toce_0330 Toce_0330 326213 327559 + peptidase M56 BlaR1 COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component~InterPro IPR008756~KEGG: dhd:Dhaf_2876 peptidase M56 BlaR1~PFAM: peptidase M56 BlaR1~SPTR: Peptidase M56 BlaR1%3B~PFAM: BlaR1 peptidase M56 gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0330 Toce_0331 Toce_0331 Toce_0331 327846 328577 + hypothetical protein KEGG: tet:TTHERM_00313150 hypothetical protein~SPTR: Putative uncharacterized protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0331 Toce_0332 Toce_0332 Toce_0332 328676 330691 + Prenyltransferase/squalene oxidase InterPro IPR001330~KEGG: tsi:TSIB_1229 hypothetical protein~PFAM: Prenyltransferase/squalene oxidase~SPTR: Putative uncharacterized protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0332 Toce_0333 Toce_0333 Toce_0333 331286 331846 + pyridoxamine 5'-phosphate oxidase-related FMN-binding protein COGs: COG3467 flavin-nucleotide-binding protein~InterPro IPR011576~KEGG: aoe:Clos_2849 nitroimidazole resistance protein%2C putative~PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding~SPTR: Nitroimidazole resistance protein%2C putative%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0333 Toce_0334 Toce_0334 Toce_0334 331993 333468 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0334 Toce_0335 Toce_0335 Toce_0335 333539 335410 - carbon-monoxide dehydrogenase%2C catalytic subunit COGs: COG1151 6Fe-6S prismane cluster-containing protein~InterPro IPR010047:IPR004137~KEGG: dae:Dtox_2933 carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane~PRIAM: Carbon-monoxide dehydrogenase (acceptor)~SPTR: Carbon-monoxide dehydrogenase%2C catalytic subunit%3B~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0335 Toce_0336 Toce_0336 Toce_0336 335662 336069 - transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: drm:Dred_2964 BadM/Rrf2 family transcriptional regulator~PFAM: protein of unknown function UPF0074~SPTR: Transcriptional regulator%2C BadM/Rrf2 family%3B~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0336 Toce_0337 Toce_0337 Toce_0337 336280 337122 + transcriptional regulator%2C RpiR family COGs: COG1737 Transcriptional regulators~InterPro IPR000281:IPR001347~KEGG: tex:Teth514_0168 RpiR family transcriptional regulator~PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~SPTR: Transcriptional regulator%2C RpiR family%3B~PFAM: Helix-turn-helix domain%2C rpiR family%3B SIS domain gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0337 Toce_0338 Toce_0338 Toce_0338 337203 337511 + phosphotransferase system lactose/cellobiose-specific IIB subunit COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB~InterPro IPR013012:IPR003501~KEGG: amt:Amet_4188 phosphotransferase system%2C lactose/cellobiose-specific IIB subunit~PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit~SPTR: PTS system%3B~PFAM: PTS system%2C Lactose/Cellobiose specific IIB subunit gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0338 Toce_0339 Toce_0339 Toce_0339 337515 338765 + PTS system%2C lactose/cellobiose family IIC subunit COGs: COG1455 Phosphotransferase system cellobiose-specific component IIC~InterPro IPR004501:IPR003352~KEGG: amt:Amet_4187 PTS system lactose/cellobiose family IIC subunit~PFAM: phosphotransferase system EIIC~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: PTS system%2C lactose/cellobiose family IIC subunit%3B~TIGRFAM: PTS system%2C lactose/cellobiose family IIC subunit~PFAM: Phosphotransferase system%2C EIIC~TIGRFAM: phosphotransferase system%2C cellobiose specific%2C IIC component%3B PTS system%2C lactose/cellobiose family IIC component gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0339 Toce_0340 Toce_0340 Toce_0340 338813 339178 + phosphotransferase system PTS lactose/cellobiose-specific IIA subunit COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA~InterPro IPR003188~KEGG: sha:SH0190 hypothetical protein~PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit~SPTR: Similar to phosphotransferase system%3B~PFAM: PTS system%2C Lactose/Cellobiose specific IIA subunit gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0340 Toce_0341 Toce_0341 Toce_0341 339159 339929 + YdjC family protein COGs: COG3394 conserved hypothetical protein~InterPro IPR006879~KEGG: amt:Amet_4184 YdjC family protein~PFAM: YdjC family protein~SPTR: YdjC family protein%3B~PFAM: YdjC-like protein gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0341 Toce_0342 Toce_0342 Toce_0342 339926 340882 + ATPase BadF/BadG/BcrA/BcrD type COGs: COG2971 N-acetylglucosamine kinase~InterPro IPR002731~KEGG: tte:TTE0216 N-acetylglucosamine kinase~PFAM: ATPase BadF/BadG/BcrA/BcrD type~SPTR: Predicted N-acetylglucosamine kinase%3B~PFAM: BadF/BadG/BcrA/BcrD ATPase family gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0342 Toce_0343 Toce_0343 Toce_0343 340894 342057 + protein of unknown function UPF0075 COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease~InterPro IPR005338~KEGG: tte:TTE0217 anhydro-N-acetylmuramic acid kinase~PFAM: protein of unknown function UPF0075~SPTR: Putative uncharacterized protein anmK%3B~PFAM: Uncharacterised protein family (UPF0075) gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0343 Toce_0344 Toce_0344 Toce_0344 342080 343006 + glucokinase regulatory-like protein COGs: COG2103 sugar phosphate isomerase~InterPro IPR005488:IPR001347~KEGG: tex:Teth514_0172 N-acetylmuramic acid-6-phosphate etherase~PFAM: sugar isomerase (SIS)~SPTR: Glucokinase regulatory-like protein%3B~TIGRFAM: glucokinase regulatory-like protein~PFAM: SIS domain~TIGRFAM: N-acetylmuramic acid 6-phosphate etherase gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0344 Toce_0345 Toce_0345 Toce_0345 342990 344309 + 6-phospho-beta-glucosidase COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase~InterPro IPR019802:IPR001088~KEGG: tte:TTE0337 alpha-galactosidase/6-phospho-beta-glucosidase~PFAM: glycoside hydrolase family 4~SPTR: Alpha-galactosidases/6-phospho-beta-glucosidases%2C family 4 of glycosyl hydrolases%3B~PFAM: Family 4 glycosyl hydrolase%3B Family 4 glycosyl hydrolase C-terminal domain gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0345 Toce_0346 Toce_0346 Toce_0346 344517 345047 + protein of unknown function UPF0157 COGs: COG2320 conserved hypothetical protein~InterPro IPR007344~KEGG: cbf:CLI_0936 hypothetical protein~PFAM: protein of unknown function UPF0157~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0157) gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0346 Toce_0347 Toce_0347 Toce_0347 345500 348913 + S-layer domain protein InterPro IPR001119:IPR001330~KEGG: pth:PTH_1483 hypothetical protein~PFAM: S-layer domain protein%3B Prenyltransferase/squalene oxidase~SPTR: Hypothetical membrane protein%3B~PFAM: Prenyltransferase and squalene oxidase repeat%3B S-layer homology domain gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0347 Toce_0348 Toce_0348 Toce_0348 349019 349849 + hypothetical protein KEGG: mta:Moth_1458 hypothetical protein~SPTR: Putative uncharacterized protein gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0348 Toce_0349 Toce_0349 Toce_0349 349862 350791 + cobalt transport protein InterPro IPR003339~KEGG: mta:Moth_1457 cobalt transport protein~PFAM: cobalt transport protein~SPTR: Cobalt transport protein%3B~PFAM: Cobalt transport protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0349 Toce_0350 Toce_0350 Toce_0350 350764 352428 + ABC transporter related protein COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterPro IPR003439:IPR017871:IPR003593~KEGG: mta:Moth_1456 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0350 Toce_0351 Toce_0351 Toce_0351 352449 353156 + conserved hypothetical protein KEGG: mta:Moth_1455 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1393) gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0351 Toce_0352 Toce_0352 Toce_0352 353298 353861 + 5-formyltetrahydrofolate cyclo-ligase COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase~InterPro IPR002698~KEGG: chy:CHY_0730 5-formyltetrahydrofolate cyclo-ligase family protein~PFAM: 5-formyltetrahydrofolate cyclo-ligase~SPTR: 5-formyltetrahydrofolate cyclo-ligase family protein%3B~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase family~TIGRFAM: 5%2C10-methenyltetrahydrofolate synthetase gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0352 Toce_0353 Toce_0353 Toce_0353 353958 355493 + GMP synthase (glutamine-hydrolyzing) COGs: COG0519 GMP synthase PP-ATPase domain/subunit~InterProIPR017926:IPR004739:IPR001674:IPR000991:IPR 011702:IPR006220~KEGG: mta:Moth_2105 GMP synthase~PFAM: GMP synthase domain protein%3B glutamine amidotransferase class-I~SPTR: GMP synthase [glutamine-hydrolyzing]%3B~TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~PFAM: Glutamine amidotransferase class-I%3B GMP synthase C terminal domain%3B NAD synthase~TIGRFAM: GMP synthase (glutamine-hydrolyzing)%2C C-terminal domain or B subunit%3B GMP synthase (glutamine-hydrolyzing)%2C N-terminal domain or A subunit gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0353 Toce_0354 Toce_0354 Toce_0354 355583 356539 + phosphate ABC transporter substrate-binding protein%2C PhoT family COGs: COG0226 ABC-type phosphate transport system periplasmic component~InterPro IPR011862:IPR006059~KEGG: aoe:Clos_1116 phosphate binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Phosphate binding protein%3B~TIGRFAM: phosphate binding protein~PFAM: Bacterial extracellular solute-binding protein~TIGRFAM: phosphate binding protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0354 Toce_0355 Toce_0355 Toce_0355 356661 357554 + phosphate ABC transporter membrane protein 1%2C PhoT family COGs: COG0573 ABC-type phosphate transport system permease component~InterPro IPR000515:IPR011864~KEGG: rmr:Rmar_1828 phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Phosphate ABC transporter%2C inner membrane subunit PstC%3B~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstC%3B phosphate ABC transporter%2C permease protein PstA gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0355 Toce_0356 Toce_0356 Toce_0356 357554 358438 + phosphate ABC transporter membrane protein 2%2C PhoT family COGs: COG0581 ABC-type phosphate transport system permease component~InterPro IPR000515:IPR005672~KEGG: afl:Aflv_0881 ABC-type phosphate transport system%2C permease component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: ABC-type phosphate transport system%2C permease component%3B~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: phosphate ABC transporter%2C permease protein PstA gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0356 Toce_0357 Toce_0357 Toce_0357 358435 359190 + phosphate ABC transporter ATP-binding protein%2C PhoT family COGs: COG1117 ABC-type phosphate transport system ATPase component~InterProIPR003439:IPR015850:IPR017871:IPR005670:IPR 003593~KEGG: chl:Chy400_0279 phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Phosphate ABC transporter%2C ATPase subunit%3B~TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: phosphate ABC transporter%2C ATP-binding protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0357 Toce_0358 Toce_0358 Toce_0358 359221 360354 + chorismate synthase COGs: COG0082 Chorismate synthase~InterPro IPR020541:IPR000453~KEGG: tal:Thal_0092 chorismate synthase~PFAM: chorismate synthase~PRIAM: Chorismate synthase~SPTR: Chorismate synthase%3B~TIGRFAM: chorismate synthase~PFAM: Chorismate synthase~TIGRFAM: chorismate synthase gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0358 Toce_0359 Toce_0359 Toce_0359 360376 361473 + 3-dehydroquinate synthase COGs: COG0337 3-dehydroquinate synthetase~InterPro IPR000623:IPR016037:IPR016303:IPR002658~KEGG: drm:Dred_1021 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase~PRIAM: 3-dehydroquinate synthase~SPTR: 3-dehydroquinate synthase%3B~TIGRFAM: 3-dehydroquinate synthase~PFAM: 3-dehydroquinate synthase~TIGRFAM: 3-dehydroquinate synthase gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0359 Toce_0360 Toce_0360 Toce_0360 361600 362685 + fructose-bisphosphate aldolase %3BD-fructose 1%2C6-bisphosphatase COGs: COG1980 fructose 1 6-bisphosphatase~InterPro IPR002803~KEGG: chy:CHY_1039 hypothetical protein~PFAM: protein of unknown function DUF100~SPTR: Putative uncharacterized protein%3B~PFAM: Fructose-1%2C6-bisphosphatase gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0360 Toce_0361 Toce_0361 Toce_0361 362920 364425 + sodium:neurotransmitter symporter COGs: COG0733 Na+-dependent transporter of the SNF family~InterPro IPR000175~KEGG: amt:Amet_0580 sodium:neurotransmitter symporter~PFAM: sodium:neurotransmitter symporter~SPTR: Transporter%3B~PFAM: Sodium:neurotransmitter symporter family gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0361 Toce_0362 Toce_0362 Toce_0362 364422 364529 + hypothetical protein gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0362 Toce_0363 Toce_0363 Toce_0363 364663 365484 + conserved hypothetical protein InterPro IPR006035~KEGG: bcu:BCAH820_2443 hypothetical protein~SPTR: Conserved domain protein%3B~PFAM: Arginase family gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0363 Toce_0364 Toce_0364 Toce_0364 365474 366277 + methylthioadenosine phosphorylase COGs: COG0005 Purine nucleoside phosphorylase~InterPro IPR010044:IPR000845~KEGG: cth:Cthe_0622 methylthioadenosine phosphorylase~PFAM: purine or other phosphorylase family 1~SPTR: Methylthioadenosine phosphorylase%3B~TIGRFAM: methylthioadenosine phosphorylase~PFAM: Phosphorylase superfamily~TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0364 Toce_0365 Toce_0365 Toce_0365 366393 367049 + class II aldolase/adducin family protein COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase~InterPro IPR000169:IPR001303~KEGG: drm:Dred_2062 class II aldolase/adducin family protein~PFAM: class II aldolase/adducin family protein~SPTR: Class II aldolase/adducin family protein%3B~PFAM: Class II Aldolase and Adducin N-terminal domain~TIGRFAM: L-ribulose-5-phosphate 4-epimerase gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0365 Toce_0366 Toce_0366 Toce_0366 367124 368713 + hypothetical protein KEGG: nth:Nther_2344 hypothetical protein~SPTR: Putative uncharacterized protein gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0366 Toce_0367 Toce_0367 Toce_0367 368736 369929 + methionine adenosyltransferase COGs: COG0192 S-adenosylmethionine synthetase~InterPro IPR002133~KEGG: csc:Csac_0857 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase~PRIAM: Methionine adenosyltransferase~SPTR: S-adenosylmethionine synthase%3B~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase%2C C-terminal domain%3B S-adenosylmethionine synthetase%2C central domain%3B S-adenosylmethionine synthetase%2C N-terminal domain~TIGRFAM: S-adenosylmethionine synthetase gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0367 Toce_0368 Toce_0368 Toce_0368 370038 371513 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0368 Toce_0369 Toce_0369 Toce_0369 371635 372825 + DegS sensor signal transduction histidine kinase COGs: COG4585 Signal transduction histidine kinase~InterProIPR005467:IPR016381:IPR003594:IPR008595:IPR 011712~KEGG: tte:TTE1682 sensory transduction histidine kinase~PFAM: Sensor DegS domain protein%3B histidine kinase dimerisation and phosphoacceptor region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~SPTR: Sensor protein DegS%3B~PFAM: Histidine kinase%3B Sensor protein DegS%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0369 Toce_0370 Toce_0370 Toce_0370 372797 373438 + two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR000792:IPR001789~KEGG: cth:Cthe_1267 two component LuxR family transcriptional regulator~PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: response regulator receiver%3B regulatory protein LuxR~SPTR: Two component transcriptional regulator%2C LuxR family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0370 Toce_0371 Toce_0371 Toce_0371 373505 373960 + hypothetical protein KEGG: pth:PTH_2758 hypothetical protein~SPTR: Hypothetical membrane protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0371 Toce_0372 Toce_0372 Toce_0372 374198 375910 + diguanylate cyclase COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain~InterPro IPR000160:IPR003018~KEGG: tte:TTE2335 diguanylate cyclase/phosphodiesterase~PFAM: GGDEF domain containing protein%3B GAF domain protein~PRIAM: Diguanylate kinase~SMART: GGDEF domain containing protein%3B GAF domain protein~SPTR: Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)%3B~TIGRFAM: diguanylate cyclase~PFAM: GAF domain%3B GGDEF domain~TIGRFAM: diguanylate cyclase (GGDEF) domain gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0372 Toce_0373 Toce_0373 Toce_0373 376013 378202 + helicase%2C RecD/TraA family COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member~InterPro IPR006345:IPR003583:IPR003593:IPR004365~KEGG: nth:Nther_2311 helicase%2C RecD/TraA family~PFAM: nucleic acid binding OB-fold tRNA/helicase-type~PRIAM: Exodeoxyribonuclease V~SMART: AAA ATPase%3B Helix-hairpin-helix DNA-binding class 1~SPTR: Helicase%2C RecD/TraA family%3B~TIGRFAM: helicase%2C RecD/TraA family~PFAM: Putative ATPase (DUF699)%3B Viral (Superfamily 1) RNA helicase~TIGRFAM: helicase%2C putative%2C RecD/TraA family gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0373 Toce_0374 Toce_0374 Toce_0374 378502 379302 + Quinolinate phosphoribosyl transferase COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase~InterPro IPR002638~KEGG: mta:Moth_1779 nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase~SPTR: Nicotinate-nucleotide pyrophosphorylase (Carboxylating)%3B~PFAM: Quinolinate phosphoribosyl transferase%2C C-terminal domain%3B Quinolinate phosphoribosyl transferase%2C N-terminal domain gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0374 Toce_0375 Toce_0375 Toce_0375 379308 380231 + molybdopterin binding domain protein InterPro IPR001453~KEGG: mta:Moth_1778 molybdopterin binding domain-containing protein~PFAM: molybdopterin binding domain~SPTR: Molybdopterin binding domain%3B~PFAM: Probable molybdopterin binding domain~TIGRFAM: molybdenum cofactor synthesis domain gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0375 Toce_0376 Toce_0376 Toce_0376 380206 380979 + 2-oxopent-4-enoate hydratase COGs: COG3971 2-keto-4-pentenoate hydratase~InterPro IPR002529~KEGG: mta:Moth_1777 4-oxalocrotonate decarboxylase~PFAM: fumarylacetoacetate (FAA) hydrolase~PRIAM: 2-oxopent-4-enoate hydratase~SPTR: 4-oxalocrotonate decarboxylase%3B~PFAM: Fumarylacetoacetate (FAA) hydrolase family~TIGRFAM: 2-oxopent-4-enoate hydratase gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0376 Toce_0377 Toce_0377 Toce_0377 381002 381877 + acetaldehyde dehydrogenase COGs: COG4569 Acetaldehyde dehydrogenase (acetylating)~InterPro IPR003361:IPR000534:IPR015426~KEGG: mta:Moth_1776 acetaldehyde dehydrogenase~PFAM: Acetaldehyde dehydrogenase %3B Semialdehyde dehydrogenase NAD - binding~PRIAM: Acetaldehyde dehydrogenase (acetylating)~SPTR: Acetaldehyde dehydrogenase%3B~TIGRFAM: acetaldehyde dehydrogenase (acetylating)~PFAM: Semialdehyde dehydrogenase%2C NAD binding domain%3B Prokaryotic acetaldehyde dehydrogenase%2C dimerisation~TIGRFAM: acetaldehyde dehydrogenase (acetylating) gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0377 Toce_0378 Toce_0378 Toce_0378 381874 382893 + 4-hydroxy-2-oxovalerate aldolase COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase~InterPro IPR000891:IPR017629:IPR012425~KEGG: mta:Moth_1775 4-hydroxy-2-ketovalerate aldolase~PFAM: pyruvate carboxyltransferase%3B DmpG communication domain protein~SPTR: 4-hydroxy-2-oxovalerate aldolase%3B~TIGRFAM: 4-hydroxy-2-oxovalerate aldolase~PFAM: DmpG-like communication domain%3B HMGL-like~TIGRFAM: 4-hydroxy-2-oxovalerate aldolase gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0378 Toce_0379 Toce_0379 Toce_0379 382896 383510 + BFD domain protein (2Fe-2S)-binding domain protein COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits~InterPro IPR017896:IPR017900:IPR007419~KEGG: chy:CHY_1274 iron-sulfur cluster-binding protein~PFAM: BFD domain protein [2Fe-2S]-binding domain protein~SPTR: Iron-sulfur cluster-binding protein%3B~PFAM: 4Fe-4S binding domain%3B BFD-like [2Fe-2S] binding domain gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0379 Toce_0380 Toce_0380 Toce_0380 383514 384962 + conserved hypothetical protein KEGG: mta:Moth_1773 hypothetical protein~SPTR: Putative uncharacterized protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0380 Toce_0381 Toce_0381 Toce_0381 385033 386283 + benzoate transporter COGs: COG3135 Uncharacterized protein involved in benzoate metabolism~InterPro IPR003016:IPR004711~KEGG: mta:Moth_1772 benzoate transporter~PFAM: Benzoate membrane transport protein~SPTR: Benzoate transporter%3B~TIGRFAM: benzoate transporter~PFAM: Benzoate membrane transport protein~TIGRFAM: benzoate transporter gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0381 Toce_0382 Toce_0382 Toce_0382 386330 386794 + Fe-S-cluster COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1~InterPro IPR017896:IPR017900~KEGG: pth:PTH_0486 Fe-S-cluster~SPTR: Fe-S-cluster%3B~PFAM: 4Fe-4S binding domain gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0382 Toce_0383 Toce_0383 Toce_0383 386814 388700 + Aldehyde ferredoxin oxidoreductase COGs: COG2414 Aldehyde:ferredoxin oxidoreductase~InterPro IPR013983:IPR001203~KEGG: chy:CHY_1712 aldehyde ferredoxin oxidoreductase%2C tungsten-containing~PFAM: aldehyde ferredoxin oxidoreductase%3B Aldehyde ferredoxin oxidoreductase~PRIAM: Aldehyde ferredoxin oxidoreductase~SMART: Aldehyde ferredoxin oxidoreductase~SPTR: Aldehyde ferredoxin oxidoreductase%2C tungsten-containing%3B~PFAM: Aldehyde ferredoxin oxidoreductase%2C N-terminal domain%3B Aldehyde ferredoxin oxidoreductase%2C domains 2 %26 3 gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0383 Toce_0384 Toce_0384 Toce_0384 388765 388995 + thiamineS protein InterPro IPR003749~KEGG: chy:CHY_1711 hypothetical protein~PFAM: thiamineS protein~SPTR: Putative uncharacterized protein%3B~PFAM: ThiS family gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0384 Toce_0385 Toce_0385 Toce_0385 389182 389967 + transcriptional regulator%2C IclR family COGs: COG1414 Transcriptional regulator~InterPro IPR005471:IPR014757~KEGG: mta:Moth_1780 IclR family transcriptional regulator~PFAM: Transcriptional regulator IclR %3B regulatory protein IclR~SMART: regulatory protein IclR~SPTR: Transcriptional regulator%2C IclR family%3B~PFAM: IclR helix-turn-helix domain%3B Bacterial transcriptional regulator gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0385 Toce_0386 Toce_0386 Toce_0386 389994 390830 + PP-loop domain protein COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily~InterPro IPR005232:IPR011063~KEGG: chy:CHY_1281 hypothetical protein~PFAM: PP-loop domain protein~SPTR: ExsB family protein%3B~PFAM: NAD synthase~TIGRFAM: conserved hypothetical protein TIGR00268 gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0386 Toce_0387 Toce_0387 Toce_0387 390818 391588 + 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase COGs: COG1691 NCAIR mutase (PurE)-related protein~InterPro IPR000031~KEGG: cth:Cthe_0368 NCAIR mutase (PurE)-related protein~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~SPTR: NCAIR mutase (PurE)-related protein%3B~PFAM: AIR carboxylase gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0387 Toce_0388 Toce_0388 Toce_0388 391569 392744 + protein of unknown function DUF111 COGs: COG1641 conserved hypothetical protein~InterPro IPR002822~KEGG: aco:Amico_1793 protein of unknown function DUF111~PFAM: protein of unknown function DUF111~SPTR: UPF0272 protein DICTH_1434%3B~PFAM: Protein of unknown function DUF111~TIGRFAM: conserved hypothetical protein TIGR00299 gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0388 Toce_0389 Toce_0389 Toce_0389 392798 394288 + glutamyl-tRNA synthetase COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase~InterPro IPR001412:IPR004527:IPR020058:IPR020060~KEGG: mta:Moth_1132 glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain~SPTR: Glutamyl-tRNA synthetase%3B~TIGRFAM: glutamyl-tRNA synthetase~PFAM: tRNA synthetases class I (E and Q)%2C catalytic domain~TIGRFAM: glutamyl-tRNA synthetase%2C bacterial family gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0389 Toce_0390 Toce_0390 Toce_0390 394378 394959 + metal dependent phosphohydrolase COGs: COG2316 hydrolase (HD superfamily)~InterPro IPR006675:IPR006674~KEGG: chy:CHY_1871 HDIG domain-containing protein~PFAM: metal-dependent phosphohydrolase HD sub domain~SPTR: HDIG domain protein%3B~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0390 Toce_0391 Toce_0391 Toce_0391 395146 395523 + transcriptional regulator%2C GntR family COGs: COG1725 transcriptional regulator protein~InterPro IPR000524~KEGG: tit:Thit_2160 transcriptional regulator%2C GntR family~PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0391 Toce_0392 Toce_0392 Toce_0392 395602 396477 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439:IPR017871:IPR003593~KEGG: pth:PTH_0278 ABC-type multidrug transport system%2C ATPase component~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0392 Toce_0393 Toce_0393 Toce_0393 396482 397108 + hypothetical protein KEGG: lsp:Bsph_4532 hypothetical protein~SPTR: Putative uncharacterized protein gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0393 Toce_0394 Toce_0394 Toce_0394 397331 398101 - putative ABC transporter%2C permease protein KEGG: cbl:CLK_3770 putative ABC transporter%2C permease protein~SPTR: Putative ABC transporter%2C permease protein gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0394 Toce_0395 Toce_0395 Toce_0395 398101 398796 - ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003439:IPR003593~KEGG: cno:NT01CX_0787 ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0395 Toce_0396 Toce_0396 Toce_0396 398781 399167 - transcriptional regulator%2C GntR family COGs: COG1725 transcriptional regulator protein~InterPro IPR000524~KEGG: dth:DICTH_0467 transcriptional regulator%2C GntR family~PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0396 Toce_0398 Toce_0398 Toce_0398 400580 402094 - pseudogene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0398 Toce_0399 Toce_0399 Toce_0399 402075 402527 - protein of unknown function DUF955 COGs: COG2856 Zn peptidase~InterPro IPR010359~KEGG: cbi:CLJ_B2579 hypothetical immunity region protein 2~PFAM: protein of unknown function DUF955~SPTR: Hypothetical immunity region protein 2%3B~PFAM: Domain of unknown function (DUF955) gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0399 Toce_0400 Toce_0400 Toce_0400 402541 402948 - helix-turn-helix domain protein InterPro IPR001387~KEGG: ckr:CKR_2925 hypothetical protein~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Immunity repressor protein%3B~PFAM: Helix-turn-helix gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0400 Toce_0401 Toce_0401 Toce_0401 403088 403300 + helix-turn-helix domain protein InterPro IPR001387~KEGG: drm:Dred_0917 XRE family transcriptional regulator~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0401 Toce_0402 Toce_0402 Toce_0402 403315 403497 + conserved hypothetical protein KEGG: tex:Teth514_0704 hypothetical protein~SPTR: Putative uncharacterized protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0402 Toce_0403 Toce_0403 Toce_0403 403592 403756 + hypothetical protein gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0403 Toce_0404 Toce_0404 Toce_0404 403949 404479 + Sigma-70 region 4 type 2 InterPro IPR013249~KEGG: sli:Slin_3339 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: Sigma-70 region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~PFAM: Sigma-70%2C region 4 gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0404 Toce_0405 Toce_0405 Toce_0405 405027 405608 - hypothetical protein KEGG: tte:TTE2071 hypothetical protein~SPTR: Putative uncharacterized protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0405 Toce_0406 Toce_0406 Toce_0406 406066 406872 + pseudogene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0406 Toce_0407 Toce_0407 Toce_0407 407018 407746 + ATPase involved in chromosome partitioning COGs: COG1192 ATPase involved in chromosome partitioning~KEGG: csc:Csac_2637 hypothetical protein~SPTR: Cobyrinic acid ac-diamide synthase%3B~manually curated~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0407 Toce_0408 Toce_0408 Toce_0408 407783 409006 - transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: pth:PTH_2606 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Hypothetical transposase%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0408 Toce_0409 Toce_0409 Toce_0409 409323 410477 + type II secretion system protein E COGs: COG4962 Flp pilus assembly protein ATPase CpaF~InterPro IPR001482~KEGG: csc:Csac_2636 type II secretion system protein E~PFAM: type II secretion system protein E~SPTR: Type II secretion system protein E%3B~PFAM: Type II/IV secretion system protein gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0409 Toce_0410 Toce_0410 Toce_0410 410465 411367 + hypothetical protein KEGG: aoe:Clos_1906 hypothetical protein~SPTR: Putative uncharacterized protein gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0410 Toce_0411 Toce_0411 Toce_0411 411377 412201 + Type II secretion system F domain protein InterPro IPR018076~KEGG: rhi:NGR_b03740 pilus assembly protein TadB~PFAM: Type II secretion system F domain~SPTR: Type II secretion system protein%3B~PFAM: Bacterial type II secretion system protein F domain gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0411 Toce_0412 Toce_0412 Toce_0412 412216 412419 + hypothetical protein KEGG: gbm:Gbem_1059 hypothetical protein~SPTR: Putative uncharacterized protein gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0412 Toce_0413 Toce_0413 Toce_0413 412463 412888 + conserved hypothetical protein KEGG: csc:Csac_2630 hypothetical protein~SPTR: Putative uncharacterized protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0413 Toce_0414 Toce_0414 Toce_0414 412833 413384 + conserved hypothetical protein KEGG: csc:Csac_2629 hypothetical protein~SPTR: Putative uncharacterized protein gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0414 Toce_0415 Toce_0415 Toce_0415 413388 414032 + SAF domain protein InterPro IPR013974~KEGG: aco:Amico_1202 Flp pilus assembly protein CpaB~PFAM: SAF domain protein~SPTR: SAF domain protein%3B~PFAM: SAF domain~TIGRFAM: Flp pilus assembly protein CpaB gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0415 Toce_0416 Toce_0416 Toce_0416 414100 414543 + protein of unknown function DUF1130 COGs: COG5483 conserved hypothetical protein~KEGG: dal:Dalk_2515 protein of unknown function DUF1130~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function%2C DUF488 gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0416 Toce_0417 Toce_0417 Toce_0417 414554 415336 + conserved hypothetical protein KEGG: tme:Tmel_1110 hypothetical protein~SPTR: Putative uncharacterized protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0417 Toce_0418 Toce_0418 Toce_0418 415793 416002 + hypothetical protein KEGG: ssa:SSA_1170 hypothetical protein~SPTR: Putative uncharacterized protein gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0418 Toce_0419 Toce_0419 Toce_0419 415995 416411 + pseudogene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0419 Toce_0420 Toce_0420 Toce_0420 416401 417090 + metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006675:IPR003607:IPR006674~KEGG: tpd:Teth39_0041 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0420 Toce_0421 Toce_0421 Toce_0421 417083 418108 + plasmid segregation actin-type ATPase ParM KEGG: tpd:Teth39_0078 hypothetical protein~SPTR: Putative uncharacterized protein gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0421 Toce_0422 Toce_0422 Toce_0422 418105 418275 + hypothetical protein SPTR: Putative uncharacterized protein gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0422 Toce_0423 Toce_0423 Toce_0423 418576 418857 + conserved hypothetical protein KEGG: tpd:Teth39_0046 hypothetical protein~SPTR: Putative uncharacterized protein gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0423 Toce_0424 Toce_0424 Toce_0424 419119 419487 + conserved hypothetical protein KEGG: tpd:Teth39_0050 hypothetical protein~SPTR: Putative uncharacterized protein gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0424 Toce_0425 Toce_0425 Toce_0425 419484 421973 + hypothetical protein KEGG: tpd:Teth39_0051 hypothetical protein~SPTR: Putative uncharacterized protein gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0425 Toce_0426 Toce_0426 Toce_0426 421963 423804 + TRAG family protein COGs: COG3505 Type IV secretory pathway VirD4 protein~InterPro IPR003688~KEGG: tpd:Teth39_0052 TraG family protein~PFAM: TRAG family protein~SPTR: TRAG family protein%3B~PFAM: TraG/TraD family gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0426 Toce_0427 Toce_0427 Toce_0427 423817 424059 + conserved hypothetical protein KEGG: tpd:Teth39_0053 hypothetical protein~SPTR: Putative uncharacterized protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0427 Toce_0428 Toce_0428 Toce_0428 424110 424964 + conserved hypothetical protein KEGG: tpd:Teth39_0054 hypothetical protein~SPTR: Putative uncharacterized protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0428 Toce_0429 Toce_0429 Toce_0429 424971 425264 + conserved hypothetical protein KEGG: tpd:Teth39_0055 hypothetical protein~SPTR: Putative uncharacterized protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0429 Toce_0430 Toce_0430 Toce_0430 425265 425909 + conserved hypothetical protein KEGG: tpd:Teth39_0059 hypothetical protein~SPTR: Putative uncharacterized protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0430 Toce_0431 Toce_0431 Toce_0431 425906 427690 + type IV secretory pathway VirB4 components-like protein COGs: COG3451 Type IV secretory pathway VirB4 protein~KEGG: tpd:Teth39_0060 type IV secretory pathway VirB4 components-like protein~SPTR: Type IV secretory pathway VirB4 components-like protein%3B~PFAM: Domain of unknown function DUF87%3B CagE%2C TrbE%2C VirB family%2C component of type IV transporter system gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0431 Toce_0432 Toce_0432 Toce_0432 427690 428625 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: tpd:Teth39_0061 peptidase M23B~PFAM: Peptidase M23~SPTR: Peptidase M23%3B~PFAM: Peptidase family M23 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0432 Toce_0433 Toce_0433 Toce_0433 428676 429005 + conserved hypothetical protein KEGG: tpd:Teth39_0047 hypothetical protein~SPTR: Putative uncharacterized protein gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0433 Toce_0434 Toce_0434 Toce_0434 429118 429699 + conserved hypothetical protein KEGG: tpd:Teth39_0048 hypothetical protein~SPTR: Putative uncharacterized protein gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0434 Toce_0435 Toce_0435 Toce_0435 429760 430113 + hypothetical protein KEGG: xal:XALc_2255 putative atp-dependent helicase protein~SPTR: Putative atp-dependent helicase protein gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0435 Toce_0436 Toce_0436 Toce_0436 430118 431203 + hypothetical protein KEGG: mta:Moth_2347 hypothetical protein~SPTR: Putative uncharacterized protein gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0436 Toce_0437 Toce_0437 Toce_0437 431673 431927 + YcfA family protein KEGG: dae:Dtox_3871 YcfA family protein~SPTR: YcfA family protein gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0437 Toce_0438 Toce_0438 Toce_0438 431920 432264 + protein of unknown function UPF0150 InterPro IPR005357~KEGG: pth:PTH_2782 hypothetical protein~PFAM: protein of unknown function UPF0150~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0150) gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0438 Toce_0439 Toce_0439 Toce_0439 432305 433285 + copper amine oxidase domain protein InterPro IPR012854~KEGG: cth:Cthe_0402 copper amine oxidase-like protein~PFAM: copper amine oxidase domain protein~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0439 Toce_0440 Toce_0440 Toce_0440 433328 438799 + PKD domain containing protein InterPro IPR000601~KEGG: csc:Csac_2638 PKD domain-containing protein~PFAM: PKD domain containing protein~SMART: PKD domain containing protein~SPTR: PKD domain containing protein%3B~PFAM: PKD domain gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0440 Toce_0441 Toce_0441 Toce_0441 439963 440106 + pseudogene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0441 Toce_0442 Toce_0442 Toce_0442 440267 440374 - hypothetical protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0442 Toce_0443 Toce_0443 Toce_0443 440956 441297 - hypothetical protein KEGG: tex:Teth514_0741 hypothetical protein~SPTR: Putative uncharacterized protein gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0443 Toce_0444 Toce_0444 Toce_0444 441489 441854 - CrcB protein COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation~InterPro IPR003691~KEGG: CrcB protein~PFAM: Camphor resistance CrcB protein~SPTR: Protein crcB homolog%3B~TIGRFAM: CrcB protein~PFAM: CrcB-like protein~TIGRFAM: crcB protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0444 Toce_0445 Toce_0445 Toce_0445 441854 442255 - camphor resistance protein CrcB COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation~InterPro IPR003691~KEGG: dhd:Dhaf_3267 CrcB protein~PFAM: Camphor resistance CrcB protein~SPTR: Protein crcB homolog%3B~TIGRFAM: CrcB protein~PFAM: CrcB-like protein~TIGRFAM: crcB protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0445 Toce_0446 Toce_0446 Toce_0446 442779 443150 - hypothetical protein KEGG: dar:Daro_1827 helix-turn-helix%2C fis-type~SPTR: Similar to tr|Q01VE7|Q01VE7_SOLUE Hypothetical protein gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0446 Toce_0447 Toce_0447 Toce_0447 443363 443683 + conserved hypothetical protein KEGG: nth:Nther_2678 hypothetical protein~SPTR: Putative uncharacterized protein gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0447 Toce_0448 Toce_0448 Toce_0448 443784 444704 + conserved hypothetical protein KEGG: dda:Dd703_0812 hypothetical protein~SPTR: Putative uncharacterized protein gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0448 Toce_0449 Toce_0449 Toce_0449 445002 446522 + adenosylcobyric acid synthase (glutamine-hydrolysing) COGs: COG1492 Cobyric acid synthase~InterPro IPR017929:IPR004459:IPR011698~KEGG: tpd:Teth39_1900 cobyric acid synthase~PFAM: CobB/CobQ domain protein glutamine amidotransferase~SPTR: Cobyric acid synthase CobQ%3B~TIGRFAM: cobyric acid synthase CobQ~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain%3B CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: cobyric acid synthase CobQ gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0449 Toce_0450 Toce_0450 Toce_0450 446665 447951 - major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR011701~KEGG: mta:Moth_1590 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily~TIGRFAM: Oxalate/Formate Antiporter gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0450 Toce_0451 Toce_0451 Toce_0451 448122 449069 - pyruvate ferredoxin oxidoreductase%2C beta subunit COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766~KEGG: mta:Moth_1591 pyruvate ferredoxin oxidoreductase%2C beta subunit~PFAM: thiamine pyrophosphate protein domain protein TPP-binding~SPTR: Pyruvate ferredoxin oxidoreductase%2C beta subunit%3B~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0451 Toce_0452 Toce_0452 Toce_0452 449095 450282 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880~KEGG: mta:Moth_1592 pyruvate flavodoxin/ferredoxin oxidoreductase-like~PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase-like%3B~PFAM: domain gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0452 Toce_0453 Toce_0453 Toce_0453 450303 451250 - pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit~InterPro IPR017896:IPR017900:IPR011898:IPR019752~KEGG: mta:Moth_1593 2-oxoacid:acceptor oxidoreductase%2C delta subunit%2C pyruvate/2-ketoisovalerate~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~SPTR: 2-oxoacid:acceptor oxidoreductase%2C delta subunit%2C pyruvate/2-ketoisovalerate%3B~TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit~PFAM: 4Fe-4S binding domain%3B Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C delta subunit%2C pyruvate/2-ketoisovalerate family gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0453 Toce_0454 Toce_0454 Toce_0454 451422 453623 - AAA family ATPase%2C CDC48 subfamily COGs: COG0464 ATPase of the AAA+ class~InterProIPR003960:IPR005938:IPR003593:IPR003338:IPR 004201:IPR003959~KEGG: mta:Moth_1594 AAA family ATPase%2C CDC48 subfamily protein~PFAM: AAA ATPase central domain protein%3B AAA ATPase VAT domain protein%3B cell division protein 48 CDC48 domain 2~PRIAM: Adenosinetriphosphatase~SMART: AAA ATPase~SPTR: AAA family ATPase%2C CDC48 subfamily%3B~TIGRFAM: AAA family ATPase%2C CDC48 subfamily~PFAM: Cell division protein 48 (CDC48)%2C N-terminal domain%3B ATPase family associated with various cellular activities (AAA)%3B Cell division protein 48 (CDC48)%2C domain 2~TIGRFAM: AAA family ATPase%2C CDC48 subfamily%3B 26S proteasome subunit P45 family gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0454 Toce_0455 Toce_0455 Toce_0455 453829 454269 + transcriptional regulator%2C MarR family COGs: COG1846 Transcriptional regulators~InterPro IPR000835~KEGG: cce:Ccel_1609 transcriptional regulator%2C MarR family~PFAM: regulatory protein MarR~SMART: regulatory protein MarR~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0455 Toce_0456 Toce_0456 Toce_0456 454327 455955 - CoA-substrate-specific enzyme activase COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)~InterPro IPR008275:IPR010327:IPR002731~KEGG: tte:TTE1113 2-hydroxyglutaryl-CoA dehydratase activator~PFAM: ATPase BadF/BadG/BcrA/BcrD type%3B 2-hydroxyglutaryl-CoA dehydratase D-component~PRIAM: Benzoyl-CoA reductase~SPTR: CoA-substrate-specific enzyme activase%3B~TIGRFAM: CoA-substrate-specific enzyme activase~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component%3B BadF/BadG/BcrA/BcrD ATPase family~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0456 Toce_0457 Toce_0457 Toce_0457 455981 457240 - 2-hydroxyglutaryl-CoA dehydratase D-component COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB~InterPro IPR010327~KEGG: tpd:Teth39_0844 2-hydroxyglutaryl-CoA dehydratase%2C D-component~PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component~SPTR: 2-hydroxyglutaryl-CoA dehydratase D-component%3B~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0457 Toce_0458 Toce_0458 Toce_0458 457428 457547 - hypothetical protein KEGG: hypothetical protein~SPTR: Chaperone protein dnaJ gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0458 Toce_0459 Toce_0459 Toce_0459 457765 458964 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR005467:IPR003594:IPR004358~KEGG: cbe:Cbei_4175 signal transduction histidine kinase regulating citrate/malate metabolism~PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~SPTR: Signal transduction histidine kinase regulating citrate/malate metabolism%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0459 Toce_0460 Toce_0460 Toce_0460 458969 459856 + response regulator receiver protein COGs: COG0784 FOG: CheY-like receiver~InterPro IPR001789:IPR013972~KEGG: cbe:Cbei_4174 response regulator receiver~PFAM: YcbB domain protein%3B response regulator receiver~SMART: response regulator receiver~SPTR: Response regulator receiver%3B~PFAM: Response regulator receiver domain%3B YcbB domain gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0460 Toce_0461 Toce_0461 Toce_0461 460000 461205 + sodium/glutamate symporter COGs: COG0786 Na+/glutamate symporter~InterPro IPR004445~KEGG: cno:NT01CX_2103 sodium/glutamate symporter~PFAM: sodium/glutamate symporter~SPTR: Sodium/glutamate symporter%3B~TIGRFAM: sodium/glutamate symporter~PFAM: Sodium/glutamate symporter~TIGRFAM: sodium--glutamate symport carrier (gltS) gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0461 Toce_0462 Toce_0462 Toce_0462 461246 462754 - protein of unknown function DUF92 transmembrane COGs: COG1836 membrane protein~InterPro IPR000374:IPR002794~KEGG: hmo:HM1_2282 hypothetical protein~PFAM: protein of unknown function DUF92 transmembrane%3B phosphatidate cytidylyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Cytidylyltransferase family%3B Integral membrane protein DUF92~TIGRFAM: conserved hypothetical protein TIGR00297 gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0462 Toce_0463 Toce_0463 Toce_0463 462907 464118 + DNA-directed DNA polymerase COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair~InterPro IPR017963:IPR001126~KEGG: mta:Moth_1229 DNA-directed DNA polymerase~PFAM: UMUC domain protein DNA-repair protein~PRIAM: DNA-directed DNA polymerase~SPTR: DNA-directed DNA polymerase%3B~PFAM: impB/mucB/samB family C-terminal%3B impB/mucB/samB family%3B IMS family HHH motif gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0463 Toce_0464 Toce_0464 Toce_0464 464189 464971 + protein of unknown function DUF72 COGs: COG1801 conserved hypothetical protein~InterPro IPR002763~KEGG: mta:Moth_0268 hypothetical protein~PFAM: protein of unknown function DUF72~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF72 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0464 Toce_0465 Toce_0465 Toce_0465 465027 465479 - GreA/GreB family elongation factor COGs: COG0782 Transcription elongation factor~InterPro IPR018151:IPR001437~KEGG: pth:PTH_0541 hypothetical protein~PFAM: transcription elongation factor GreA/GreB domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: Transcription elongation factor%2C GreA/GreB%2C C-term gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0465 Toce_0466 Toce_0466 Toce_0466 465633 466607 - D-alanine--D-alanine ligase COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein~InterPro IPR011761:IPR011095~KEGG: tpd:Teth39_2176 D-alanine--D-alanine ligase~PFAM: D-alanine--D-alanine ligase domain protein~PRIAM: D-alanine--D-alanine ligase~SPTR: D-alanine--D-alanine ligase%3B~PFAM: D-ala D-ala ligase C-terminus~TIGRFAM: D-alanine--D-alanine ligase gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0466 Toce_0467 Toce_0467 Toce_0467 466863 467849 + Ornithine cyclodeaminase COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog~InterPro IPR003462~KEGG: cbl:CLK_1960 ornithine cyclodeaminase~PFAM: ornithine cyclodeaminase/mu-crystallin~PRIAM: Ornithine cyclodeaminase~SPTR: Ornithine cyclodeaminase%3B~PFAM: Ornithine cyclodeaminase/mu-crystallin family~TIGRFAM: alanine dehydrogenase%2C Archaeoglobus fulgidus type gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0467 Toce_0468 Toce_0468 Toce_0468 467871 469514 + methyl-accepting chemotaxis sensory transducer with Cache sensor COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089:IPR004010~KEGG: mta:Moth_2029 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B Cache domain protein~SMART: chemotaxis sensory transducer~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~PFAM: Cache domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0468 Toce_0469 Toce_0469 Toce_0469 469564 471573 - methyl-accepting chemotaxis sensory transducer with Cache sensor COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089:IPR003660:IPR004010~KEGG: mta:Moth_1487 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B Cache domain protein%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~PFAM: Cache domain%3B HAMP domain%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0469 Toce_0470 Toce_0470 Toce_0470 471551 472027 - CheW protein COGs: COG0835 Chemotaxis signal transduction protein~InterPro IPR002545~KEGG: tte:TTE0700 chemotaxis signal transduction protein~PFAM: CheW domain protein~SMART: CheW domain protein~SPTR: Chemotaxis signal transduction protein%3B~PFAM: CheW-like domain gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0470 Toce_0471 Toce_0471 Toce_0471 472500 472904 + hemerythrin-like metal-binding protein COGs: COG2703 Hemerythrin~InterPro IPR016131:IPR012827:IPR012312~KEGG: ate:Athe_0453 hemerythrin-like metal-binding protein~PFAM: Hemerythrin HHE cation binding domain protein~SPTR: Hemerythrin-like metal-binding protein%3B~TIGRFAM: hemerythrin-like metal-binding protein~PFAM: Hemerythrin HHE cation binding domain~TIGRFAM: hemerythrin-like metal-binding domain gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0471 Toce_0472 Toce_0472 Toce_0472 473072 474145 + response regulator receiver modulated CheB methylesterase COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain~InterPro IPR001789:IPR000673:IPR008248~KEGG: ate:Athe_2235 response regulator receiver modulated CheB methylesterase~PFAM: CheB methylesterase%3B response regulator receiver~SMART: response regulator receiver~SPTR: Response regulator receiver modulated CheB methylesterase%3B~PFAM: CheB methylesterase%3B Response regulator receiver domain gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0472 Toce_0473 Toce_0473 Toce_0473 474132 475574 + diguanylate cyclase and metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR000160:IPR006674~KEGG: nth:Nther_2110 diguanylate cyclase and metal dependent phosphohydrolase~PFAM: GGDEF domain containing protein%3B metal-dependent phosphohydrolase HD sub domain~SMART: GGDEF domain containing protein~SPTR: Diguanylate cyclase and metal dependent phosphohydrolase%3B~TIGRFAM: diguanylate cyclase~PFAM: HD domain%3B GGDEF domain~TIGRFAM: PAS domain S-box%3B diguanylate cyclase (GGDEF) domain gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0473 Toce_0474 Toce_0474 Toce_0474 475591 476184 - hypothetical protein KEGG: amt:Amet_0695 hypothetical protein~SPTR: Putative uncharacterized protein gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0474 Toce_0475 Toce_0475 Toce_0475 476261 476770 - N-acetylmuramoyl-L-alanine amidase family 2 InterPro IPR002502~KEGG: dau:Daud_1669 N-acetylmuramoyl-L-alanine amidase~PFAM: N-acetylmuramoyl-L-alanine amidase family 2~SMART: N-acetylmuramoyl-L-alanine amidase family 2~SPTR: N-acetylmuramoyl-L-alanine amidase%2C family 2%3B~PFAM: N-acetylmuramoyl-L-alanine amidase gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0475 Toce_0476 Toce_0476 Toce_0476 476793 476954 - conserved hypothetical protein KEGG: amt:Amet_0721 hypothetical protein~SPTR: Putative uncharacterized protein gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0476 Toce_0477 Toce_0477 Toce_0477 477010 477231 - conserved hypothetical protein KEGG: mta:Moth_1792 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2922) gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0477 Toce_0478 Toce_0478 Toce_0478 477271 477495 - protein of unknown function DUF1659 InterPro IPR012454~KEGG: mta:Moth_1793 hypothetical protein~PFAM: protein of unknown function DUF1659~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1659) gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0478 Toce_0479 Toce_0479 Toce_0479 477831 478994 + tRNA pseudouridine synthase D TruD COGs: COG0585 conserved hypothetical protein~InterPro IPR011760:IPR020119:IPR001656~KEGG: csc:Csac_1232 tRNA pseudouridine synthase D%2C TruD~PFAM: tRNA pseudouridine synthase D TruD~SPTR: tRNA pseudouridine synthase D%2C TruD%3B~PFAM: tRNA pseudouridine synthase D (TruD)~TIGRFAM: conserved hypothetical protein TIGR00094 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0479 Toce_0480 Toce_0480 Toce_0480 479066 479977 + UDP-glucose pyrophosphorylase COGs: COG1210 UDP-glucose pyrophosphorylase~InterPro IPR005771:IPR005835~KEGG: tte:TTE0732 UDP-glucose pyrophosphorylase~PFAM: Nucleotidyl transferase~SPTR: UTP-glucose-1-phosphate uridylyltransferase%3B~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase%3B UbiD family decarboxylases gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0480 Toce_0481 Toce_0481 Toce_0481 480158 484117 + pseudogene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0481 Toce_0482 Toce_0482 Toce_0482 480390 481121 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0482 Toce_0483 Toce_0483 Toce_0483 481115 482638 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR017894:IPR001584~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0483 Toce_0484 Toce_0484 Toce_0484 484169 484579 - hypothetical protein KEGG: gla:GL50803_8610 Coiled-coil protein~SPTR: Putative uncharacterized protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0484 Toce_0485 Toce_0485 Toce_0485 484683 485843 + peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR000209~KEGG: mta:Moth_2027 aerolysin~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin~SPTR: Aerolysin. Serine peptidase. MEROPS family S08A%3B~PFAM: Subtilase family gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0485 Toce_0486 Toce_0486 Toce_0486 485847 486182 + conserved hypothetical protein KEGG: mta:Moth_2028 hypothetical protein~SPTR: Putative uncharacterized protein gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0486 Toce_0487 Toce_0487 Toce_0487 486524 489481 + O-antigen polymerase InterPro IPR019734:IPR013026:IPR007016~KEGG: tte:TTE0644 TPR repeat-containing protein~PFAM: O-antigen polymerase~SPTR: TPR-repeat-containing proteins%3B~PFAM: O-Antigen ligase gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0487 Toce_0488 Toce_0488 Toce_0488 489569 490345 + ABC-2 type transporter COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component~InterPro IPR000412:IPR013525:IPR013526~KEGG: adg:Adeg_0506 ABC-2 type transporter~PFAM: ABC-2 type transporter~SPTR: ABC-2 type transporter%3B~PFAM: ABC-2 type transporter gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0488 Toce_0489 Toce_0489 Toce_0489 490371 491132 + ABC transporter related protein COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component~InterPro IPR003439:IPR003593~KEGG: ABC transporter related protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0489 Toce_0490 Toce_0490 Toce_0490 491166 492809 + hypothetical protein KEGG: ptm:GSPATT00013151001 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Polysaccharide pyruvyl transferase gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0490 Toce_0491 Toce_0491 Toce_0491 492806 495055 + glycosyl transferase family 2 COGs: COG0438 Glycosyltransferase~InterPro IPR001296:IPR001173~KEGG: rca:Rcas_3648 glycosyl transferase family protein~PFAM: glycosyl transferase family 2%3B glycosyl transferase group 1~SPTR: Glycosyl transferase family 2%3B~PFAM: Starch synthase catalytic domain%3B Glycosyl transferases group 1%3B Glycosyl transferase family 2 gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0491 Toce_0492 Toce_0492 Toce_0492 495071 495865 + glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: rca:Rcas_3636 glycosyl transferase family protein~PFAM: glycosyl transferase family 2~SPTR: Glycosyl transferase family 2%3B~PFAM: Glycosyl transferase family 2 gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0492 Toce_0493 Toce_0493 Toce_0493 495993 497135 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: adg:Adeg_0504 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0493 Toce_0494 Toce_0494 Toce_0494 497220 498620 + exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR017475:IPR003362~KEGG: csc:Csac_1093 sugar transferase~PFAM: sugar transferase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily protein%3B~TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~PFAM: Bacterial sugar transferase~TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0494 Toce_0495 Toce_0495 Toce_0495 498854 499660 + Protein-tyrosine-phosphatase COGs: COG4464 Capsular polysaccharide biosynthesis protein~InterPro IPR016667:IPR004013~KEGG: tte:TTE0735 capsular polysaccharide biosynthesis homolog YwqE~PFAM: PHP domain protein~PRIAM: Protein-tyrosine-phosphatase~SPTR: Capsular polysaccharide biosynthesis homolog ywqE gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0495 Toce_0496 Toce_0496 Toce_0496 499662 500729 + S-layer domain protein InterPro IPR001119~KEGG: gym:GYMC10_1663 S-layer domain protein~PFAM: S-layer domain protein~SPTR: S-layer associated multidomain endoglucanase%3B~PFAM: S-layer homology domain gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0496 Toce_0497 Toce_0497 Toce_0497 500827 502944 + S-layer domain protein InterPro IPR001119~KEGG: tex:Teth514_1781 alpha amylase%2C catalytic region~PFAM: S-layer domain protein~SPTR: Alpha amylase%2C catalytic region%3B~PFAM: S-layer homology domain gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0497 Toce_0498 Toce_0498 Toce_0498 503003 503566 + hypothetical protein KEGG: dae:Dtox_3983 hypothetical protein~SPTR: Putative uncharacterized protein gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0498 Toce_0499 Toce_0499 Toce_0499 503585 504298 + lipopolysaccharide biosynthesis protein COGs: COG3944 Capsular polysaccharide biosynthesis protein~InterPro IPR003856~KEGG: tpd:Teth39_1555 lipopolysaccharide biosynthesis protein~PFAM: lipopolysaccharide biosynthesis protein~SPTR: Lipopolysaccharide biosynthesis protein%3B~PFAM: Chain length determinant protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0499 Toce_0500 Toce_0500 Toce_0500 504298 505014 + capsular exopolysaccharide family COGs: COG0489 ATPase involved in chromosome partitioning~InterPro IPR005702~KEGG: tpd:Teth39_1554 exopolysaccharide tyrosine-protein kinase~PRIAM: Non-specific protein-tyrosine kinase~SPTR: Capsular exopolysaccharide family protein%3B~TIGRFAM: capsular exopolysaccharide family~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: capsular exopolysaccharide family gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0500 Toce_0501 Toce_0501 Toce_0501 505065 506615 + Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis~InterPro IPR017472:IPR017475:IPR003362~KEGG: dau:Daud_1703 undecaprenyl-phosphate galactose phosphotransferase~PFAM: sugar transferase~PRIAM: Undecaprenyl-phosphate galactose phosphotransferase~SPTR: Undecaprenyl-phosphate galactose phosphotransferase%3B~TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP%3B exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase~PFAM: Bacterial sugar transferase~TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase%3B Undecaprenyl-phosphate galactose phosphotransferase%2C WbaP gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0501 Toce_0502 Toce_0502 Toce_0502 506719 508077 + nucleotide sugar dehydrogenase COGs: COG1004 UDP-glucose 6-dehydrogenase~InterPro IPR017476:IPR001732:IPR014026:IPR014027~KEGG: mtp:Mthe_0952 UDP-glucose 6-dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase~PRIAM: UDP-glucose 6-dehydrogenase~SPTR: Nucleotide sugar dehydrogenase subfamily protein%3B~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain~TIGRFAM: nucleotide sugar dehydrogenase gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0502 Toce_0503 Toce_0503 Toce_0503 508605 509714 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: bph:Bphy_6702 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0503 Toce_0504 Toce_0504 Toce_0504 509707 510825 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: mfa:Mfla_2015 glycosyl transferase%2C group 1~PFAM: glycosyl transferase group 1~SPTR: Glycosyl transferase%2C group 1%3B~PFAM: Glycosyl transferases group 1 gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0504 Toce_0505 Toce_0505 Toce_0505 510874 512001 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: afw:Anae109_4436 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0505 Toce_0506 Toce_0506 Toce_0506 512078 513655 + LicD family protein InterPro IPR007074~KEGG: bvi:Bcep1808_6516 hypothetical protein~PFAM: LicD family protein~SPTR: Putative uncharacterized protein%3B~PFAM: LICD Protein Family gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0506 Toce_0507 Toce_0507 Toce_0507 513991 515415 + hypothetical protein KEGG: cms:CMS_1585 putative polysaccharide polymerase~SPTR: Putative uncharacterized protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0507 Toce_0508 Toce_0508 Toce_0508 515441 516619 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: cyn:Cyan7425_2189 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0508 Toce_0509 Toce_0509 Toce_0509 516730 517992 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: chu:CHU_0913 A-glycosyltransferase~PFAM: glycosyl transferase group 1~SPTR: A-glycosyltransferase-related protein%2C glycosyltransferase family 4 protein%3B~PFAM: Glycosyl transferases group 1 gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0509 Toce_0510 Toce_0510 Toce_0510 517989 519041 + GDP-mannose 4%2C6-dehydratase COGs: COG1089 GDP-D-mannose dehydratase~InterPro IPR020904:IPR006368:IPR001509~KEGG: sus:Acid_4632 GDP-mannose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: GDP-mannose 4%2C6-dehydratase%3B~TIGRFAM: GDP-mannose 4%2C6-dehydratase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: GDP-mannose 4%2C6-dehydratase gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0510 Toce_0511 Toce_0511 Toce_0511 519034 519963 + NAD-dependent epimerase/dehydratase COGs: COG0451 Nucleoside-diphosphate-sugar epimerase~InterPro IPR001509~KEGG: mba:Mbar_A0035 GDP-fucose synthetase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: NAD-dependent epimerase/dehydratase%3B~manually curated~PFAM: NAD dependent epimerase/dehydratase family gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0511 Toce_0512 Toce_0512 Toce_0512 520073 521410 + deoxyguanosinetriphosphate triphosphohydrolase COGs: COG0232 dGTP triphosphohydrolase~InterPro IPR006261:IPR003607:IPR006674~KEGG: tkm:TK90_0267 deoxyguanosinetriphosphate triphosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Deoxyguanosinetriphosphate triphosphohydrolase%3B~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: HD domain~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase%2C putative gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0512 Toce_0513 Toce_0513 Toce_0513 521407 521685 + hypothetical protein SPTR: Putative uncharacterized protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0513 Toce_0514 Toce_0514 Toce_0514 521630 522586 - aldo/keto reductase COGs: COG1453 oxidoreductase of the aldo/keto reductase family~InterPro IPR017896:IPR017900:IPR001395:IPR020471~KEGG: mta:Moth_0964 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: Aldo/keto reductase%3B~PFAM: Aldo/keto reductase family gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0514 Toce_0515 Toce_0515 Toce_0515 523044 524207 + glycerol 2-dehydrogenase (NAD+) COGs: COG0371 Glycerol dehydrogenase~InterProIPR006162:IPR018211:IPR016160:IPR016205:IPR 001670~KEGG: cno:NT01CX_0287 glycerol dehydrogenase~PFAM: iron-containing alcohol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Iron-containing alcohol dehydrogenase gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0515 Toce_0516 Toce_0516 Toce_0516 524386 524463 - pseudogene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0516 Toce_0517 Toce_0517 Toce_0517 524585 525976 - MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: aoe:Clos_0856 MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~SPTR: MATE efflux family protein%3B~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0517 Toce_0518 Toce_0518 Toce_0518 529323 530393 - transposase IS116/IS110/IS902 family protein InterPro IPR003346~KEGG: tit:Thit_1358 transposase IS116/IS110/IS902 family protein~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Transposase IS116/IS110/IS902 family protein%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0518 Toce_0519 Toce_0519 Toce_0519 530520 531602 + peptidase S58 DmpA COGs: COG3191 L-aminopeptidase/D-esterase~InterPro IPR005321~KEGG: tte:TTE1085 L-aminopeptidase/D-esterase~PFAM: peptidase S58 DmpA~SPTR: Peptidase family T4%3B~PFAM: Peptidase family S58 gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0519 Toce_0520 Toce_0520 Toce_0520 531659 531988 - transcriptional modulator of MazE/toxin%2C MazF COGs: COG2337 Growth inhibitor~InterPro IPR003477~KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF)~PFAM: PemK family protein~SPTR: PpGpp-regulated growth inhibitor (ChpA/MazF)%3B~manually curated~PFAM: PemK-like protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0520 Toce_0521 Toce_0521 Toce_0521 531988 532257 - transcriptional regulator/antitoxin%2C MazE COGs: COG2336 Growth regulator~InterPro IPR007159~KEGG: gyc:GYMC61_2489 transcriptional regulator/antitoxin%2C MazE~PFAM: SpoVT/AbrB domain protein~SPTR: Suppressor of ppGpp-regulated growth inhibitor (ChpA/MazF)%3B~PFAM: SpoVT / AbrB like domain gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0521 Toce_0522 Toce_0522 Toce_0522 532470 532862 + HEPN domain protein COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN~InterPro IPR007842~KEGG: dth:DICTH_0449 HEPN domain%2C putative~PFAM: HEPN domain protein~SMART: HEPN domain protein~SPTR: Hepn domain%2C putative%3B~PFAM: HEPN domain gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0522 Toce_0523 Toce_0523 Toce_0523 532816 533178 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: dth:DICTH_0448 nucleotidyltransferase domain%2C putative~PFAM: DNA polymerase beta domain protein region~SPTR: Nucleotidyltransferase domain%2C putative%3B~PFAM: Nucleotidyltransferase domain gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0523 Toce_0524 Toce_0524 Toce_0524 533390 535756 + CRISPR-associated protein%2C Csm1 family COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs)~InterPro IPR000160:IPR013408~KEGG: ate:Athe_2704 metal dependent phosphohydrolase~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: CRISPR-associated protein%2C Csm1 family~PFAM: HD domain~TIGRFAM: CRISPR-associated protein%2C Csm1 family gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0524 Toce_0525 Toce_0525 Toce_0525 535770 536192 + CRISPR-associated protein%2C Csm2 family InterPro IPR010149~KEGG: csc:Csac_0076 CRISPR-associated Csm2 family protein~PFAM: CRISPR-associated protein TM1810 domain protein~SPTR: CRISPR-associated protein%2C Csm2 family%3B~TIGRFAM: CRISPR-associated protein%2C Csm2 family~PFAM: Protein of unknown function (DUF310)~TIGRFAM: CRISPR-associated protein%2C Csm2 family gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0525 Toce_0526 Toce_0526 Toce_0526 536208 537026 + CRISPR-associated protein%2C Csm3 family COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR013412:IPR005537~KEGG: csc:Csac_0077 CRISPR-associated RAMP Csm3 family protein~PFAM: protein of unknown function DUF324~SPTR: CRISPR-associated RAMP protein%2C Csm3 family%3B~TIGRFAM: CRISPR-associated RAMP protein%2C Csm3 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Csm3 family gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0526 Toce_0527 Toce_0527 Toce_0527 537033 537992 + CRISPR-associated RAMP protein%2C Csm4 family COGs: COG1567 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR005510:IPR005537~KEGG: tme:Tmel_1673 CRISPR-associated RAMP Csm4 family protein~PFAM: protein of unknown function DUF324~SPTR: CRISPR-associated RAMP protein%2C Csm4 family%3B~TIGRFAM: CRISPR-associated RAMP protein%2C Csm4 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Csm4 family gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0527 Toce_0528 Toce_0528 Toce_0528 538005 539126 + CRISPR-associated RAMP protein%2C Csm5 family COGs: COG1332 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR010173:IPR005537~KEGG: ate:Athe_2700 CRISPR-associated RAMP protein%2C Csm5 family~PFAM: protein of unknown function DUF324~SPTR: CRISPR-associated RAMP protein%2C Csm5 family%3B~TIGRFAM: CRISPR-associated RAMP protein%2C Csm5 family~PFAM: RAMP superfamily~TIGRFAM: CRISPR-associated RAMP protein%2C Csm5 family gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0528 Toce_0529 Toce_0529 Toce_0529 539132 539812 + CRISPR-associated protein Cas6 COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)~InterPro IPR010156:IPR002743~KEGG: chy:CHY_2139 CRISPR-associated Cas family protein~PFAM: protein of unknown function DUF57~SPTR: CRISPR-associated protein Cas6%3B~TIGRFAM: CRISPR-associated protein Cas6~PFAM: CRISPR associated protein Cas6~TIGRFAM: CRISPR-associated protein Cas6 gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0529 Toce_0530 Toce_0530 Toce_0530 539813 541177 + CRISPR-associated protein%2C MJ1666 family InterPro IPR010171:IPR019016~KEGG: ate:Athe_2714 CRISPR-associated protein%2C MJ1666 family~PFAM: CRISPR-associated protein DxTHG~SPTR: CRISPR-associated protein%2C MJ1666 family%3B~TIGRFAM: CRISPR-associated protein%2C MJ1666 family~PFAM: CRISPR-associated (Cas) DxTHG family~TIGRFAM: CRISPR-associated protein%2C MJ1666 family gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0530 Toce_0531 Toce_0531 Toce_0531 541217 541501 + CRISPR-associated protein%2C Csx3 family InterPro IPR013409~KEGG: dtu:Dtur_0613 CRISPR-associated protein%2C Csx3 family~PFAM: CRISPR-associated protein Csx3~SPTR: CRISPR-associated protein%2C Csx3 family%3B~TIGRFAM: CRISPR-associated protein%2C Csx3 family~PFAM: CRISPR-associated protein (Cas_csx3)~TIGRFAM: CRISPR-associated protein%2C Csx3 family gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0531 Toce_0532 Toce_0532 Toce_0532 543530 543841 + transposase IS3/IS911 family protein InterPro IPR002514~KEGG: swo:Swol_2510 transposase IS3/IS911~PFAM: transposase IS3/IS911 family protein~SPTR: Transposase IS3/IS911%3B~PFAM: Transposase gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0532 Toce_0533 Toce_0533 Toce_0533 543856 544794 + Integrase catalytic region COGs: COG2801 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: gtn:GTNG_3490 IS1477 transposase~PFAM: Integrase catalytic region~SPTR: IS1477 transposase%3B~manually curated~PFAM: Integrase core domain gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0533 Toce_0534 Toce_0534 Toce_0534 545398 546069 - pseudogene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0534 Toce_0535 Toce_0535 Toce_0535 546344 546856 + NADH dehydrogenase (ubiquinone) 24 kDa subunit COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023~KEGG: hor:Hore_01790 NADH dehydrogenase I subunit E~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~SPTR: NADH dehydrogenase I subunit E%3B~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0535 Toce_0536 Toce_0536 Toce_0536 546840 548717 + NADH dehydrogenase (quinone) COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterProIPR017896:IPR017900:IPR001949:IPR011538:IPR 019554:IPR019575~KEGG: cce:Ccel_2304 respiratory-chain NADH dehydrogenase domain 51 kDa subunit~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B 4Fe-4S binding domain%3B Respiratory-chain NADH dehydrogenase 24 Kd subunit%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0536 Toce_0537 Toce_0537 Toce_0537 548718 550418 + NAD(P)-dependent iron-only hydrogenase catalytic subunit COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterProIPR001041:IPR017896:IPR017900:IPR000283:IPR 013352:IPR019574:IPR004108:IPR003149~KEGG: hor:Hore_01810 NADH dehydrogenase I subunit G~PFAM: hydrogenase large subunit domain protein%3B NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B ferredoxin%3B iron hydrogenase small subunit~SPTR: NADH dehydrogenase I subunit G%3B~TIGRFAM: hydrogenase%2C Fe-only~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region%3B Iron hydrogenase small subunit~TIGRFAM: hydrogenases%2C Fe-only gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0537 Toce_0538 Toce_0538 Toce_0538 550491 550862 - FeS cluster assembly scaffold protein NifU COGs: COG0822 NifU homolog involved in Fe-S cluster formation~InterPro IPR017787:IPR002871~KEGG: mta:Moth_1651 nitrogen-fixing NifU-like~PFAM: nitrogen-fixing NifU domain protein~SPTR: Nitrogen-fixing NifU-like%3B~TIGRFAM: FeS cluster assembly scaffold protein NifU~PFAM: NifU-like N terminal domain~TIGRFAM: FeS cluster assembly scaffold protein NifU%2C Clostridium type gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0538 Toce_0539 Toce_0539 Toce_0539 550909 553539 - Alpha-mannosidase COGs: COG0383 Alpha-mannosidase~InterPro IPR000602:IPR011682~KEGG: tit:Thit_0527 glycoside hydrolase family 38~PFAM: glycoside hydrolase family 38%3B glycosyl hydrolase 38 domain protein~PRIAM: Alpha-mannosidase~SPTR: Glycoside hydrolase family 38%3B~PFAM: Glycosyl hydrolases family 38 C-terminal domain%3B Glycosyl hydrolases family 38 N-terminal domain gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0539 Toce_0540 Toce_0540 Toce_0540 553591 555422 - pseudogene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0540 Toce_0541 Toce_0541 Toce_0541 555412 557379 - transcriptional antiterminator%2C BglG COGs: COG3711 Transcriptional antiterminator~InterProIPR001034:IPR002178:IPR013011:IPR011608:IPR 007737~KEGG: tit:Thit_0523 PTS modulated transcriptional regulator%2C MtlR family~PFAM: PRD domain protein%3B M trans-acting positive regulator%3B phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: PTS modulated transcriptional regulator%2C MtlR family%3B~PFAM: Mga helix-turn-helix domain%3B HTH domain%3B PRD domain%3B PTS system%2C Lactose/Cellobiose specific IIB subunit%3B Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0541 Toce_0542 Toce_0542 Toce_0542 557517 557846 - DNA polymerase beta domain protein region InterPro IPR002934~KEGG: pai:PAE0273 hypothetical protein~PFAM: DNA polymerase beta domain protein region~SPTR: Putative uncharacterized protein%3B~PFAM: Nucleotidyltransferase domain gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0542 Toce_0543 Toce_0543 Toce_0543 557822 558208 - HEPN domain protein COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN~InterPro IPR007842~KEGG: tye:THEYE_A1691 HEPN domain%2C putative~PFAM: HEPN domain protein~SMART: HEPN domain protein~SPTR: Hepn domain%2C putative%3B~PFAM: HEPN domain gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0543 Toce_0544 Toce_0544 Toce_0544 558299 559573 - copper amine oxidase domain protein COGs: COG3858 glycosyl hydrolase~InterPro IPR012854:IPR001223~KEGG: tit:Thit_2291 copper amine oxidase domain protein~PFAM: copper amine oxidase domain protein%3B glycoside hydrolase family 18~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain%3B Glycosyl hydrolases family 18 gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0544 Toce_0545 Toce_0545 Toce_0545 559757 560983 + histidine kinase COGs: COG2972 signal transduction protein with a C-terminal ATPase domain~InterPro IPR003594:IPR018771:IPR010559:IPR004358~KEGG: tex:Teth514_1959 histidine kinase~PFAM: Transcription regulator%2Chistidine kinase sensor-like%3B histidine kinase internal region%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~SPTR: Histidine kinase%3B~PFAM: Histidine kinase%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Predicted histidine kinase sensor domain gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0545 Toce_0546 Toce_0546 Toce_0546 560973 562571 + two component transcriptional regulator%2C AraC family COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain~InterProIPR018060:IPR001789:IPR018062:IPR000005:IPR 020449~KEGG: tex:Teth514_1958 response regulator receiver protein~PFAM: response regulator receiver%3B helix-turn-helix- domain containing protein AraC type~SMART: response regulator receiver%3B Helix-turn-helix%2C AraC domain~SPTR: Response regulator receiver protein%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0546 Toce_0547 Toce_0547 Toce_0547 562774 563052 + microcompartments protein COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein~InterPro IPR020808:IPR000249~KEGG: tex:Teth514_1955 microcompartments protein~PFAM: microcompartments protein~SPTR: Microcompartments protein%3B~PFAM: BMC domain gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0547 Toce_0548 Toce_0548 Toce_0548 563085 563864 + microcompartments protein COGs: COG4816 Ethanolamine utilization protein~InterPro IPR009193:IPR000249~KEGG: tex:Teth514_1954 microcompartments protein~PFAM: microcompartments protein~SPTR: Microcompartments protein%3B~PFAM: BMC domain gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0548 Toce_0549 Toce_0549 Toce_0549 563889 565556 + Glycerol dehydratase COGs: COG4909 Propanediol dehydratase large subunit~InterPro IPR003206~KEGG: tex:Teth514_1953 glycerol dehydratase~PFAM: dehydratase large subunit~PRIAM: Glycerol dehydratase~SPTR: Glycerol dehydratase%3B~PFAM: Dehydratase large subunit gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0549 Toce_0550 Toce_0550 Toce_0550 565587 566261 + dehydratase medium subunit InterPro IPR003208~KEGG: tex:Teth514_1952 dehydratase%2C medium subunit~PFAM: dehydratase medium subunit~SPTR: Dehydratase%2C medium subunit%3B~PFAM: Dehydratase medium subunit gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0550 Toce_0551 Toce_0551 Toce_0551 566261 566776 + dehydratase small subunit COGs: COG4910 Propanediol dehydratase small subunit~InterPro IPR003207~KEGG: tex:Teth514_1951 dehydratase%2C small subunit~PFAM: dehydratase small subunit~SPTR: Dehydratase%2C small subunit%3B~PFAM: Dehydratase small subunit gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0551 Toce_0552 Toce_0552 Toce_0552 566811 568628 + Diol/glycerol dehydratase reactivating factor large subunit InterPro IPR009191~KEGG: tex:Teth514_1950 hypothetical protein~PFAM: Diol/glycerol dehydratase reactivating factor large subunit~SPTR: Putative uncharacterized protein%3B~PFAM: Diol dehydratase reactivase ATPase-like domain gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0552 Toce_0553 Toce_0553 Toce_0553 568625 568981 + conserved hypothetical protein KEGG: tex:Teth514_1949 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Dehydratase medium subunit gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0553 Toce_0554 Toce_0554 Toce_0554 569002 569457 + microcompartments protein COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein~InterPro IPR000249~KEGG: tex:Teth514_1948 microcompartments protein~PFAM: microcompartments protein~SPTR: Microcompartments protein%3B~PFAM: BMC domain gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0554 Toce_0555 Toce_0555 Toce_0555 569494 570135 + Propanediol utilization protein COGs: COG4869 Propanediol utilization protein~InterPro IPR008300~KEGG: tex:Teth514_1947 propanediol utilization protein~PFAM: Propanediol utilization protein~SPTR: Propanediol utilization protein%3B~PFAM: Propanediol utilisation protein PduL gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0555 Toce_0556 Toce_0556 Toce_0556 570175 570987 + ethanolamine utilization protein EutJ family protein COGs: COG4820 Ethanolamine utilization protein possible chaperonin~InterPro IPR018181:IPR013366:IPR002731~KEGG: tex:Teth514_1946 ethanolamine utilization protein EutJ family protein~PFAM: ATPase BadF/BadG/BcrA/BcrD type~SPTR: Ethanolamine utilization protein EutJ family protein%3B~TIGRFAM: ethanolamine utilization protein EutJ family protein~PFAM: Hsp70 protein~TIGRFAM: ethanolamine utilization protein EutJ family protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0556 Toce_0557 Toce_0557 Toce_0557 571000 571782 + flavoprotein InterPro IPR003382~KEGG: tex:Teth514_1945 hypothetical protein~PFAM: flavoprotein~SPTR: Putative uncharacterized protein%3B~PFAM: Flavoprotein gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0557 Toce_0558 Toce_0558 Toce_0558 571792 572076 + Ethanolamine utilization protein EutN/carboxysome structural protein Ccml COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein~InterPro IPR004992~KEGG: tex:Teth514_1944 ethanolamine utilization protein EutN/carboxysome structural protein CcmL~PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml~SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml%3B~PFAM: Ethanolamine utilisation protein EutN/carboxysome gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0558 Toce_0559 Toce_0559 Toce_0559 572093 573088 + ATP/cobalamin adenosyltransferase COGs: COG2096 conserved hypothetical protein~InterPro IPR017858:IPR009221:IPR002779:IPR005624~KEGG: tex:Teth514_1943 ATP--cobalamin adenosyltransferase~PFAM: cobalamin adenosyltransferase%3B protein of unknown function DUF336~PRIAM: Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~SPTR: ATP--cobalamin adenosyltransferase%3B~TIGRFAM: ATP/cobalamin adenosyltransferase~PFAM: Domain of unknown function (DUF336)%3B Cobalamin adenosyltransferase~TIGRFAM: ATP:cob(I)alamin adenosyltransferase gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0559 Toce_0560 Toce_0560 Toce_0560 573094 574497 + Aldehyde Dehydrogenase COGs: COG1012 NAD-dependent aldehyde dehydrogenase~InterPro IPR012408:IPR015590~KEGG: tex:Teth514_1942 aldehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~SPTR: Aldehyde dehydrogenase%3B~PFAM: Aldehyde dehydrogenase family gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0560 Toce_0561 Toce_0561 Toce_0561 574517 575842 + Respiratory-chain NADH dehydrogenase domain 51 kDa subunit COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC~InterProIPR017896:IPR017900:IPR017054:IPR011538:IPR 019554~KEGG: cbt:CLH_1845 ethanolamine utilization Fe-S center protein eut~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain~SPTR: Ethanolamine utilization Fe-S center protein eut%3B~PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0561 Toce_0562 Toce_0562 Toce_0562 575854 576399 + microcompartments protein COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein~InterPro IPR011238:IPR000249~KEGG: tex:Teth514_1939 microcompartments protein~PFAM: microcompartments protein~SPTR: Microcompartments protein%3B~PFAM: BMC domain gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0562 Toce_0563 Toce_0563 Toce_0563 576571 576939 - helix-turn-helix domain protein InterPro IPR001387~KEGG: cth:Cthe_2395 XRE family transcriptional regulator~PFAM: helix-turn-helix domain protein~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0563 Toce_0564 Toce_0564 Toce_0564 577199 577609 + PTS system fructose subfamily IIA component COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA~InterPro IPR004701~KEGG: cpf:CPF_2965 PTS system%2C IIA component~PFAM: PTS system fructose subfamily IIA component~SPTR: Probable PTS system%3B~PFAM: PTS system fructose IIA component~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIA component gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0564 Toce_0565 Toce_0565 Toce_0565 577681 578577 + Domain of unknown function DUF1848 InterPro IPR014998~KEGG: tau:Tola_1402 domain of unknown function DUF1848~PFAM: Domain of unknown function DUF1848~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1848) gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0565 Toce_0566 Toce_0566 Toce_0566 578642 579025 + hypothetical protein KEGG: mta:Moth_0416 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Nucleotidyltransferase domain gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0566 Toce_0567 Toce_0567 Toce_0567 579022 579456 + conserved hypothetical protein KEGG: rmr:Rmar_1645 hypothetical protein~SPTR: Putative uncharacterized protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0567 Toce_0568 Toce_0568 Toce_0568 579522 580493 + UDP-galactose 4-epimerase COGs: COG1087 UDP-glucose 4-epimerase~InterPro IPR005886:IPR001509~KEGG: mta:Moth_0673 UDP-galactose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase~SPTR: UDP-galactose 4-epimerase%3B~TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD dependent epimerase/dehydratase family~TIGRFAM: UDP-glucose-4-epimerase gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0568 Toce_0569 Toce_0569 Toce_0569 580619 580984 + conserved hypothetical protein KEGG: hor:Hore_05240 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1113) gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0569 Toce_0570 Toce_0570 Toce_0570 581054 581431 + 6-pyruvoyl tetrahydropterin synthase and hypothetical protein COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase~InterPro IPR007115~KEGG: dtu:Dtur_0614 queuosine biosynthesis protein QueD~PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein~SPTR: Queuosine biosynthesis protein QueD%3B~PFAM: 6-pyruvoyl tetrahydropterin synthase~TIGRFAM: queuosine biosynthesis protein QueD%3B 6-pyruvoyl tetrahydropterin synthase/QueD family protein gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0570 Toce_0571 Toce_0571 Toce_0571 581412 582197 + GTP cyclohydrolase I COGs: COG1469 conserved hypothetical protein~InterPro IPR003801~KEGG: dtu:Dtur_0615 putative GTP cyclohydrolase~PFAM: protein of unknown function DUF198~PRIAM: GTP cyclohydrolase I~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized ACR%2C COG1469 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0571 Toce_0572 Toce_0572 Toce_0572 582181 583377 + dihydropteroate synthase COGs: COG0294 Dihydropteroate synthase~InterPro IPR000489:IPR006390~KEGG: dth:DICTH_0461 dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS~PRIAM: Dihydropteroate synthase~SPTR: Dihydropteroate synthase%3B~TIGRFAM: dihydropteroate synthase~PFAM: Pterin binding enzyme~TIGRFAM: dihydropteroate synthase gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0572 Toce_0573 Toce_0573 Toce_0573 583359 583814 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase~InterPro IPR000550~KEGG: dtu:Dtur_0617 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK~PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase~SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase%3B~TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase~PFAM: 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)~TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0573 Toce_0574 Toce_0574 Toce_0574 583918 584838 + polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: hmo:HM1_0945 polysaccharide deacetylase%2C putative~PFAM: polysaccharide deacetylase~SPTR: Polysaccharide deacetylase%2C putative%3B~PFAM: Polysaccharide deacetylase gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0574 Toce_0575 Toce_0575 Toce_0575 584891 585310 + Protein-tyrosine phosphatase%2C low molecular weight COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867~KEGG: sul:SYO3AOP1_0933 protein tyrosine phosphatase~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: Protein ArsC%3B~PFAM: Low molecular weight phosphotyrosine protein phosphatase~TIGRFAM: arsenate reductase (thioredoxin) gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0575 Toce_0576 Toce_0576 Toce_0576 585325 586173 + degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: afl:Aflv_2160 hypothetical protein~PFAM: DegV family protein~SPTR: Uncharacterized protein conserved in bacteria%3B~TIGRFAM: degV family protein~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0576 Toce_0577 Toce_0577 Toce_0577 586214 587443 - putative PAS/PAC sensor protein COGs: COG2461 conserved hypothetical protein~InterPro IPR000014:IPR007380:IPR012312:IPR013656~KEGG: mta:Moth_1931 hypothetical protein~PFAM: protein of unknown function DUF438%3B Hemerythrin HHE cation binding domain protein%3B PAS fold-4 domain protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: PAS sensor protein~PFAM: Family of unknown function (DUF438)%3B Hemerythrin HHE cation binding domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0577 Toce_0578 Toce_0578 Toce_0578 587484 587831 - Cupin 2 conserved barrel domain protein COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain~InterPro IPR013096~KEGG: ctc:CTC00439 hypothetical protein~PFAM: Cupin 2 conserved barrel domain protein~SPTR: Conserved protein%3B~PFAM: Cupin domain gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0578 Toce_0579 Toce_0579 Toce_0579 587935 588510 + protein of unknown function DUF820 COGs: COG4636 conserved hypothetical protein~InterPro IPR008538~KEGG: ate:Athe_0024 protein of unknown function DUF820~PFAM: protein of unknown function DUF820~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF820) gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0579 Toce_0580 Toce_0580 Toce_0580 588540 589046 + ferripyochelin binding protein (fbp) COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily~InterPro IPR001451~KEGG: nth:Nther_0108 ferripyochelin binding protein (fbp)~SPTR: Ferripyochelin binding protein (Fbp) gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0580 Toce_0581 Toce_0581 Toce_0581 589224 589664 + conserved hypothetical protein KEGG: mta:Moth_1707 hypothetical protein~SPTR: Putative uncharacterized protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0581 Toce_0582 Toce_0582 Toce_0582 589680 589871 + RNA-binding protein%2C predicted InterPro IPR019300~KEGG: dae:Dtox_3961 hypothetical protein~PFAM: RNA-binding protein%2C predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted RNA-binding protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0582 Toce_0583 Toce_0583 Toce_0583 589963 590598 + cobalamin (vitamin B12) biosynthesis CbiM protein COGs: COG0310 ABC-type Co2+ transport system permease component~InterPro IPR002751~KEGG: dae:Dtox_1148 cobalamin (vitamin B12) biosynthesis CbiM protein~PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein~SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein%3B~PFAM: Cobalt uptake substrate-specific transmembrane region~TIGRFAM: cobalamin biosynthesis protein CbiM gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0583 Toce_0584 Toce_0584 Toce_0584 590595 590900 + conserved hypothetical protein KEGG: drm:Dred_2566 hypothetical protein~SPTR: Putative uncharacterized protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0584 Toce_0585 Toce_0585 Toce_0585 590914 591747 + cobalt ABC transporter%2C inner membrane subunit CbiQ COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter~InterPro IPR012809:IPR003339~KEGG: pth:PTH_1655 ABC-type cobalt transport system%2C permease component CbiQ and related transporters~PFAM: cobalt transport protein~SPTR: ABC-type cobalt transport system%2C permease component CbiQ and related transporters%3B~TIGRFAM: cobalt ABC transporter%2C inner membrane subunit CbiQ~PFAM: Cobalt transport protein~TIGRFAM: cobalt ABC transporter%2C permease protein CbiQ gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0585 Toce_0586 Toce_0586 Toce_0586 591726 592559 + cobalt ABC transporter%2C ATPase subunit COGs: COG1122 ABC-type cobalt transport system ATPase component~InterPro IPR003439:IPR017871:IPR005876:IPR003593~KEGG: dae:Dtox_1151 cobalt ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Cobalt ABC transporter%2C ATPase subunit%3B~TIGRFAM: cobalt ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: cobalt transport protein ATP-binding subunit gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0586 Toce_0587 Toce_0587 Toce_0587 592683 593786 + nucleoside-binding protein COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein~InterPro IPR003760~KEGG: chy:CHY_1536 basic membrane protein family protein~PFAM: basic membrane lipoprotein~SPTR: Basic membrane protein family protein%3B~PFAM: Basic membrane protein gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0587 Toce_0588 Toce_0588 Toce_0588 593852 595378 + nucleoside ABC transporter ATP-binding protein COGs: COG3845 ABC-type uncharacterized transport systems ATPase components~InterPro IPR003439:IPR017871:IPR003593~KEGG: chy:CHY_1535 putative sugar ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Putative sugar ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0588 Toce_0589 Toce_0589 Toce_0589 595375 596523 + inner-membrane translocator COGs: COG4603 ABC-type uncharacterized transport system permease component~InterPro IPR001851~KEGG: chy:CHY_1534 putative sugar ABC transporter%2C permease protein~PFAM: inner-membrane translocator~SPTR: Putative sugar ABC transporter%2C permease protein%3B~PFAM: Branched-chain amino acid transport system / permease component gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0589 Toce_0590 Toce_0590 Toce_0590 596490 597404 + nucleoside ABC transporter membrane protein COGs: COG1079 ABC-type transport system permease component~InterPro IPR001851~KEGG: chy:CHY_1533 putative sugar ABC transporter%2C permease protein~PFAM: inner-membrane translocator~SPTR: Putative sugar ABC transporter%2C permease protein%3B~PFAM: Branched-chain amino acid transport system / permease component gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0590 Toce_0591 Toce_0591 Toce_0591 597443 598162 + transcriptional regulator%2C GntR family COGs: COG2188 Transcriptional regulators~InterPro IPR000524:IPR011663~KEGG: csc:Csac_2320 GntR family transcriptional regulator~PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B UTRA domain gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0591 Toce_0592 Toce_0592 Toce_0592 598175 598561 + cytidine deaminase COGs: COG0295 Cytidine deaminase~InterPro IPR016192:IPR006262:IPR002125~KEGG: cytidine deaminase~PFAM: CMP/dCMP deaminase zinc-binding~SPTR: Cytidine deaminase%3B~TIGRFAM: cytidine deaminase~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: cytidine deaminase%2C homotetrameric gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0592 Toce_0593 Toce_0593 Toce_0593 598586 599914 + thymidine phosphorylase COGs: COG0213 Thymidine phosphorylase~InterProIPR017872:IPR018090:IPR000053:IPR017459:IPR 000312:IPR013102~KEGG: csc:Csac_2318 pyrimidine-nucleoside phosphorylase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like%3B Pyrimidine nucleoside phosphorylase domain~SPTR: Thymidine phosphorylase%3B~TIGRFAM: pyrimidine-nucleoside phosphorylase~PFAM: Glycosyl transferase family%2C a/b domain%3B Pyrimidine nucleoside phosphorylase C-terminal domain%3B Glycosyl transferase family%2C helical bundle domain~TIGRFAM: pyrimidine-nucleoside phosphorylase gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0593 Toce_0594 Toce_0594 Toce_0594 599933 601108 + phosphopentomutase COGs: COG1015 Phosphopentomutase~InterPro IPR010045:IPR006124~KEGG: hmo:HM1_0315 phosphopentomutase~PFAM: metalloenzyme domain protein~PRIAM: Phosphopentomutase~SPTR: Phosphopentomutase%3B~TIGRFAM: phosphopentomutase~PFAM: Metalloenzyme superfamily~TIGRFAM: phosphopentomutase gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0594 Toce_0595 Toce_0595 Toce_0595 601164 601985 + inosine guanosine and xanthosine phosphorylase family COGs: COG0005 Purine nucleoside phosphorylase~InterPro IPR011268:IPR011270:IPR000845~KEGG: csc:Csac_2315 inosine guanosine and xanthosine phosphorylase family protein~PFAM: purine or other phosphorylase family 1~SPTR: Inosine guanosine and xanthosine phosphorylase family%3B~TIGRFAM: inosine guanosine and xanthosine phosphorylase family%3B purine nucleoside phosphorylase I%2C inosine and guanosine-specific~PFAM: Phosphorylase superfamily~TIGRFAM: purine nucleoside phosphorylase I%2C inosine and guanosine-specific%3B inosine guanosine and xanthosine phosphorylase family gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0595 Toce_0596 Toce_0596 Toce_0596 602232 602801 + hypothetical protein KEGG: tte:TTE0415 hypothetical protein~SPTR: Putative uncharacterized protein gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0596 Toce_0597 Toce_0597 Toce_0597 602920 603282 + hypothetical protein KEGG: hor:Hore_04990 deoxyribodipyrimidine photo-lyase~SPTR: Putative uncharacterized protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0597 Toce_0598 Toce_0598 Toce_0598 603341 603643 + protein of unknown function DUF1538 InterPro IPR011435~KEGG: bpf:BpOF4_15970 hypothetical protein~PFAM: protein of unknown function DUF1538~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1538) gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0598 Toce_0599 Toce_0599 Toce_0599 603785 605308 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR017894:IPR001584~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0599 Toce_0600 Toce_0600 Toce_0600 605302 606033 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0600 Toce_0601 Toce_0601 Toce_0601 606093 606512 + protein of unknown function DUF1538 InterPro IPR011435~KEGG: chy:CHY_1192 hypothetical protein~PFAM: protein of unknown function DUF1538~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1538) gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0601 Toce_0602 Toce_0602 Toce_0602 606509 607267 + protein of unknown function DUF1538 InterPro IPR011435~KEGG: bpf:BpOF4_15975 hypothetical protein~PFAM: protein of unknown function DUF1538~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1538) gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0602 Toce_0603 Toce_0603 Toce_0603 607233 607604 + PII family protein InterPro IPR002187~KEGG: chy:CHY_1194 PII family protein~SPTR: Putative uncharacterized protein%3B~PFAM: Nitrogen regulatory protein P-II gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0603 Toce_0604 Toce_0604 Toce_0604 607588 607926 + PII family protein InterPro IPR002187~KEGG: chy:CHY_1194 PII family protein~SPTR: PII family protein%3B~PFAM: Nitrogen regulatory protein P-II gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0604 Toce_0605 Toce_0605 Toce_0605 608236 609732 + asparagine synthase (glutamine-hydrolyzing) COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing)~InterPro IPR017932:IPR006426:IPR000583:IPR001962~KEGG: tex:Teth514_2106 asparagine synthetase B~PFAM: asparagine synthase%3B glutamine amidotransferase class-II~SPTR: Asparagine synthase (Glutamine-hydrolyzing)%3B~TIGRFAM: asparagine synthase (glutamine-hydrolyzing)~PFAM: Asparagine synthase~TIGRFAM: asparagine synthase (glutamine-hydrolyzing) gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0605 Toce_0606 Toce_0606 Toce_0606 609952 610401 + hypothetical protein KEGG: bwe:BcerKBAB4_4281 hypothetical protein~SPTR: TRAP dicarboxylate transporter%2C DctM subunit gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0606 Toce_0607 Toce_0607 Toce_0607 610824 611642 + Arsenite methyltransferase COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis~InterPro IPR013216~KEGG: sus:Acid_4410 arsenite S-adenosylmethyltransferase~PFAM: Methyltransferase type 11~PRIAM: Arsenite methyltransferase~SPTR: Methyltransferase type 11%3B~PFAM: Methyltransferase domain gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0607 Toce_0608 Toce_0608 Toce_0608 611655 612149 + GCN5-related N-acetyltransferase COGs: COG1247 Sortase and related acyltransferase~InterPro IPR000182~KEGG: amt:Amet_1698 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0608 Toce_0609 Toce_0609 Toce_0609 612355 612763 - pseudogene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0609 Toce_0610 Toce_0610 Toce_0610 612884 613564 + lipoate-protein ligase B COGs: COG0321 Lipoate-protein ligase B~InterPro IPR020605:IPR000544:IPR004143~KEGG: tit:Thit_1503 lipoate-protein ligase B~PFAM: biotin/lipoate A/B protein ligase~PRIAM: Lipoyl(octanoyl) transferase~SPTR: Lipoate-protein ligase B%3B~TIGRFAM: lipoate-protein ligase B~PFAM: Biotin/lipoate A/B protein ligase family~TIGRFAM: lipoate-protein ligase B gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0610 Toce_0611 Toce_0611 Toce_0611 613561 614424 + lipoic acid synthetase COGs: COG0320 Lipoate synthase~InterPro IPR003698:IPR006638:IPR007197~KEGG: tpd:Teth39_0787 lipoyl synthase~PFAM: Radical SAM domain protein~PRIAM: Lipoyl synthase~SMART: Elongator protein 3/MiaB/NifB~SPTR: Lipoic acid synthetase%3B~TIGRFAM: lipoic acid synthetase~PFAM: Radical SAM superfamily~TIGRFAM: lipoate synthase gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0611 Toce_0612 Toce_0612 Toce_0612 614442 615122 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG1600 Uncharacterized Fe-S protein~InterPro IPR017896:IPR017900~KEGG: tpd:Teth39_1523 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein%3B~TIGRFAM: iron-sulfur cluster binding protein%2C putative gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0612 Toce_0613 Toce_0613 Toce_0613 615362 616966 + extracellular solute-binding protein family 5 COGs: COG0747 ABC-type dipeptide transport system periplasmic component~InterPro IPR000914~KEGG: sth:STH128 oligopeptide ABC transporter substrate-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: Oligopeptide ABC transporter substrate-binding protein%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0613 Toce_0614 Toce_0614 Toce_0614 617023 617946 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: sth:STH129 oligopeptide ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Oligopeptide ABC transporter permease protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0614 Toce_0615 Toce_0615 Toce_0615 617959 618849 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: sth:STH130 oligopeptide ABC transporter permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Oligopeptide ABC transporter permease protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0615 Toce_0616 Toce_0616 Toce_0616 618870 620021 + NLP/P60 protein COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein)~InterPro IPR000064~KEGG: tle:Tlet_0253 NLP/P60 protein~PFAM: NLP/P60 protein~SPTR: NLP/P60 protein%3B~PFAM: NlpC/P60 family%3B Bacterial SH3 domain gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0616 Toce_0617 Toce_0617 Toce_0617 620037 621026 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterPro IPR003439:IPR010066:IPR003593:IPR013563~KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Oligopeptide ABC transporter ATP-binding protein%3B~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0617 Toce_0618 Toce_0618 Toce_0618 621031 622005 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterProIPR003439:IPR017871:IPR010066:IPR003593:IPR 013563~KEGG: sth:STH2823 oligopeptide ABC transporter ATP-binding protein~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Oligopeptide ABC transporter ATP-binding protein%3B~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0618 Toce_0619 Toce_0619 Toce_0619 622006 622689 - Rhomboid family protein COGs: COG0705 membrane protein~InterPro IPR002610~KEGG: tpd:Teth39_1878 rhomboid family protein~PFAM: Rhomboid family protein~SPTR: Rhomboid family protein%3B~PFAM: Rhomboid family gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0619 Toce_0620 Toce_0620 Toce_0620 622859 623818 + conserved hypothetical protein InterPro IPR005479~KEGG: cth:Cthe_1443 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2935) gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0620 Toce_0621 Toce_0621 Toce_0621 624220 625233 + 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase~InterPro IPR006268:IPR006218~KEGG: tte:TTE1013 3-deoxy-7-phosphoheptulonate synthase~PFAM: DAHP synthetase I/KDSA~PRIAM: 3-deoxy-7-phosphoheptulonate synthase~SPTR: 3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase%3B~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase I family~TIGRFAM: 3-deoxy-8-phosphooctulonate synthase%3B phospho-2-dehydro-3-deoxyheptonate aldolase gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0621 Toce_0622 Toce_0622 Toce_0622 625234 626130 + Prephenate dehydrogenase COGs: COG0287 Prephenate dehydrogenase~InterPro IPR003099~KEGG: tpd:Teth39_0985 prephenate dehydrogenase~PFAM: Prephenate dehydrogenase~PRIAM: Prephenate dehydrogenase~SPTR: Prephenate dehydrogenase%3B~PFAM: Prephenate dehydrogenase gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0622 Toce_0623 Toce_0623 Toce_0623 626108 627394 + 3-phosphoshikimate 1-carboxyvinyltransferase COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase~InterPro IPR001986:IPR006264:IPR016228~KEGG: tpd:Teth39_0986 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase%3B~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0623 Toce_0624 Toce_0624 Toce_0624 627591 628604 + aspartate semialdehyde dehydrogenase COGs: COG0136 Aspartate-semialdehyde dehydrogenase~InterPro IPR005986:IPR012080:IPR000534:IPR012280~KEGG: adg:Adeg_0350 aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase dimerisation region%3B Semialdehyde dehydrogenase NAD - binding~PRIAM: Aspartate-semialdehyde dehydrogenase~SPTR: Aspartate-semialdehyde dehydrogenase%3B~TIGRFAM: aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase%2C dimerisation domain%3B Semialdehyde dehydrogenase%2C NAD binding domain~TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0624 Toce_0625 Toce_0625 Toce_0625 628617 629798 + aspartate kinase COGs: COG0527 Aspartokinase~InterProIPR018042:IPR005260:IPR001341:IPR001048:IPR 002912~KEGG: chy:CHY_1155 aspartate kinase I~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein~SPTR: Aspartokinase%3B~TIGRFAM: aspartate kinase%3B aspartate kinase%2C monofunctional class~PFAM: Amino acid kinase family~TIGRFAM: aspartate kinase%2C monofunctional class%3B aspartate kinase gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0625 Toce_0626 Toce_0626 Toce_0626 629840 630403 + conserved hypothetical protein COGs: COG1751 conserved hypothetical protein~InterPro IPR005829:IPR015074~KEGG: csc:Csac_1944 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Pyruvate kinase%2C alpha/beta domain gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0626 Toce_0627 Toce_0627 Toce_0627 630449 631675 - sodium:dicarboxylate symporter COGs: COG1301 Na+/H+-dicarboxylate symporter~InterPro IPR018107:IPR001991~KEGG: tpd:Teth39_1134 sodium:dicarboxylate symporter~PFAM: sodium:dicarboxylate symporter~SPTR: Sodium:dicarboxylate symporter%3B~PFAM: Sodium:dicarboxylate symporter family gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0627 Toce_0628 Toce_0628 Toce_0628 631863 632393 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG1225 Peroxiredoxin~InterPro IPR017936:IPR000866~KEGG: hor:Hore_18200 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B~PFAM: AhpC/TSA family gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0628 Toce_0629 Toce_0629 Toce_0629 632512 633147 - cytochrome c biogenesis protein transmembrane region COGs: COG0785 Cytochrome c biogenesis protein~InterPro IPR003834~KEGG: maq:Maqu_3250 cytochrome c biogenesis protein%2C transmembrane region~PFAM: cytochrome c biogenesis protein transmembrane region~SPTR: Cytochrome c biogenesis protein%2C transmembrane region%3B~PFAM: Cytochrome C biogenesis protein transmembrane region gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0629 Toce_0630 Toce_0630 Toce_0630 633343 634026 + copper amine oxidase domain protein InterPro IPR012854~KEGG: tit:Thit_0521 copper amine oxidase domain protein~PFAM: copper amine oxidase domain protein~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0630 Toce_0631 Toce_0631 Toce_0631 634068 635156 - hypothetical protein KEGG: tte:TTE0927 hypothetical protein~SPTR: Putative uncharacterized protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0631 Toce_0632 Toce_0632 Toce_0632 635309 636220 + protein of unknown function DUF6 transmembrane InterPro IPR000620~KEGG: drm:Dred_1524 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: Putative uncharacterized protein%3B~PFAM: EamA-like transporter family gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0632 Toce_0633 Toce_0633 Toce_0633 636239 637261 + FMN-dependent alpha-hydroxy acid dehydrogenase COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase~InterPro IPR012133:IPR000262~KEGG: adg:Adeg_1075 FMN-dependent alpha-hydroxy acid dehydrogenase~PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~SPTR: FMN-dependent alpha-hydroxy acid dehydrogenase%3B~PFAM: FMN-dependent dehydrogenase gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0633 Toce_0634 Toce_0634 Toce_0634 637335 638717 + tryptophanase COGs: COG3033 Tryptophanase~InterPro IPR011166:IPR001597~KEGG: tte:TTE1602 tryptophanase~PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase~PRIAM: Tryptophanase~SPTR: Tryptophanase%3B~PFAM: Beta-eliminating lyase~TIGRFAM: tyrosine phenol-lyase%3B tryptophanase%2C leader peptide-associated gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0634 Toce_0635 Toce_0635 Toce_0635 638764 639858 - GTP-binding protein YchF COGs: COG0012 GTPase probable translation factor~InterPro IPR004396:IPR006073:IPR002917:IPR013029~KEGG: tte:TTE1658 GTP-dependent nucleic acid-binding protein EngD~PFAM: Protein of unknown function DUF933%3B GTP-binding protein HSR1-related~SPTR: GTP-binding protein YchF%3B~TIGRFAM: GTP-binding protein YchF~PFAM: GTPase of unknown function%3B Protein of unknown function (DUF933)~TIGRFAM: GTP-binding protein YchF gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0635 Toce_0636 Toce_0636 Toce_0636 640027 640824 + Cof-like hydrolase COGs: COG0561 hydrolase of the HAD superfamily~InterPro IPR000150:IPR006379:IPR013200~KEGG: tpd:Teth39_0727 Cof-like hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase type 3~SPTR: Cof-like hydrolase%3B~TIGRFAM: Cof-like hydrolase%3B HAD-superfamily hydrolase%2C subfamily IIB~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily%3B HAD-superfamily hydrolase%2C subfamily IIB gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0636 Toce_0637 Toce_0637 Toce_0637 640830 641561 - ribosomal small subunit pseudouridine synthase A COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase~InterProIPR002942:IPR000748:IPR010916:IPR018496:IPR 006145~KEGG: tte:TTE0052 16S rRNA uridine-516 pseudouridylate synthase family protein~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Pseudouridine synthase%3B~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase family gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0637 Toce_0638 Toce_0638 Toce_0638 641738 642139 - hypothetical protein KEGG: dps:DPPA11 hypothetical protein~SPTR: I-connectin gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0638 Toce_0639 Toce_0639 Toce_0639 642300 642395 - hypothetical protein KEGG: bta:506995 integrin%2C beta 4 gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0639 Toce_0640 Toce_0640 Toce_0640 642517 642636 - hypothetical protein KEGG: tpt:Tpet_0487 binding-protein-dependent transport systems inner membrane component gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0640 Toce_0641 Toce_0641 Toce_0641 642879 643217 + hypothetical protein KEGG: tex:Teth514_1068 hypothetical protein~SPTR: Putative uncharacterized protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0641 Toce_0642 Toce_0642 Toce_0642 643529 644326 + hydroxyethylthiazole kinase COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family~InterPro IPR000417:IPR011144~KEGG: tpd:Teth39_1654 hydroxyethylthiazole kinase~PFAM: hydroxyethylthiazole kinase~PRIAM: Hydroxyethylthiazole kinase~SPTR: Hydroxyethylthiazole kinase%3B~PFAM: Hydroxyethylthiazole kinase family~TIGRFAM: hydroxyethylthiazole kinase gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0642 Toce_0643 Toce_0643 Toce_0643 644474 644650 + conserved hypothetical protein KEGG: tit:Thit_2374 hypothetical protein~SPTR: Putative uncharacterized protein gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0643 Toce_0644 Toce_0644 Toce_0644 644991 645320 + hypothetical protein KEGG: cce:Ccel_1297 hypothetical protein~SPTR: Putative uncharacterized protein gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0644 Toce_0645 Toce_0645 Toce_0645 645334 646677 - Serine-type D-Ala-D-Ala carboxypeptidase COGs: COG1876 D-alanyl-D-alanine carboxypeptidase~InterPro IPR012854:IPR003709~KEGG: cth:Cthe_1899 M15B family D-Ala-D-Ala carboxypeptidase VanY~PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin%3B copper amine oxidase domain protein~PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase~SPTR: Serine-type D-Ala-D-Ala carboxypeptidase%3B~PFAM: Copper amine oxidase N-terminal domain%3B D-alanyl-D-alanine carboxypeptidase gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0645 Toce_0646 Toce_0646 Toce_0646 646866 648014 + glycerate kinase COGs: COG1929 Glycerate kinase~InterPro IPR004381~KEGG: chy:CHY_1268 glycerate kinase 2~PFAM: glycerate kinase~PRIAM: Glycerate kinase~SPTR: Glycerate kinase 2%3B~TIGRFAM: glycerate kinase~PFAM: Glycerate kinase family~TIGRFAM: glycerate kinase gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0646 Toce_0647 Toce_0647 Toce_0647 648015 649400 + predicted D-glycerate permease (TC 2.A.8.1.6) COGs: COG2610 H+/gluconate symporter and related permease~InterPro IPR003474~KEGG: mta:Moth_0895 gluconate transporter~PFAM: Gluconate transporter~SPTR: Gluconate transporter%3B~PFAM: GntP family permease~TIGRFAM: gluconate transporter gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0647 Toce_0648 Toce_0648 Toce_0648 649550 650728 + transcriptional regulator%2C CdaR COGs: COG3835 Sugar diacid utilization regulator~InterPro IPR008599:IPR002197~KEGG: putative sugar diacid recognition~PFAM: sugar diacid recognition domain protein%3B helix-turn-helix Fis-type~SPTR: Putative sugar diacid utilization regulator%3B~PFAM: Putative sugar diacid recognition gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0648 Toce_0649 Toce_0649 Toce_0649 650801 652711 + proprionate catabolism activator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR003593:IPR002078:IPR020441:IPR 010524:IPR013767:IPR002197~KEGG: tpd:Teth39_1679 sigma-54 dependent trancsriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B Propionate catabolism activator domain protein%3B PAS fold domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma54 specific transcriptional regulator%2C Fis family%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B Propionate catabolism activator%3B PAS fold~TIGRFAM: PAS domain S-box gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0649 Toce_0650 Toce_0650 Toce_0650 652881 653183 + SAF domain protein COGs: COG2721 Altronate dehydratase~InterPro IPR013974~KEGG: tpd:Teth39_1678 SAF domain-containing protein~PFAM: SAF domain protein~SPTR: SAF domain%3B~PFAM: SAF domain gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0650 Toce_0651 Toce_0651 Toce_0651 653180 654337 + Altronate dehydratase COGs: COG2721 Altronate dehydratase~InterPro IPR007392~KEGG: tpd:Teth39_1677 altronate dehydratase~PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein~PRIAM: Altronate dehydratase~SPTR: Altronate dehydratase%3B~PFAM: D-galactarate dehydratase / Altronate hydrolase%2C C terminus gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0651 Toce_0652 Toce_0652 Toce_0652 654355 655320 + 2-keto-3-deoxygluconate permease (TC 2.A.10.1.1) InterPro IPR004684~KEGG: tpd:Teth39_1676 2-keto-3-deoxygluconate permease~PFAM: 2-keto-3-deoxygluconate permease~SPTR: 2-keto-3-deoxygluconate permease%3B~PFAM: 2-keto-3-deoxygluconate permease~TIGRFAM: 2-keto-3-deoxygluconate transporter gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0652 Toce_0653 Toce_0653 Toce_0653 655313 656572 + type III effector Hrp-dependent outers domain protein COGs: COG3395 conserved hypothetical protein~InterPro IPR010737~KEGG: tpd:Teth39_1675 type III effector Hrp-dependent outers~PFAM: type III effector Hrp-dependent outers~SPTR: Type III effector Hrp-dependent outers%3B~PFAM: Protein of unknown function%2C DUF1537 gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0653 Toce_0654 Toce_0654 Toce_0654 656569 657549 + 4-hydroxythreonine-4-phosphate dehydrogenase COGs: COG1995 Pyridoxal phosphate biosynthesis protein~InterPro IPR005255~KEGG: tpd:Teth39_1674 4-hydroxythreonine-4-phosphate dehydrogenase~PFAM: Pyridoxal phosphate biosynthetic protein PdxA~PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase~SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase%3B~TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase~PFAM: Pyridoxal phosphate biosynthetic protein PdxA~TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0654 Toce_0655 Toce_0655 Toce_0655 657776 658066 + aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit~InterPro IPR003837~KEGG: cth:Cthe_1033 aspartyl/glutamyl-tRNA amidotransferase subunit C~PFAM: Glu-tRNAGln amidotransferase C subunit~SPTR: Glutamyl-tRNA(Gln) amidotransferase%2C C subunit%3B~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C C subunit~PFAM: Glu-tRNAGln amidotransferase C subunit~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C C subunit gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0655 Toce_0656 Toce_0656 Toce_0656 658086 659534 + aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase~InterPro IPR004412:IPR020556:IPR000120~KEGG: mta:Moth_2009 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A~PFAM: Amidase~SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A%3B~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C A subunit~PFAM: Amidase~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C A subunit gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0656 Toce_0657 Toce_0657 Toce_0657 659551 660978 + aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)~InterPro IPR004413:IPR017958:IPR006075:IPR018027~KEGG: chy:CHY_1103 aspartyl/glutamyl-tRNA amidotransferase subunit B~PFAM: GatB region%3B Asn/Gln amidotransferase~SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B%3B~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB/GatE catalytic domain%3B GatB domain~TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase%2C B subunit gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0657 Toce_0658 Toce_0658 Toce_0658 661301 662950 + extracellular solute-binding protein family 5 COGs: COG4166 ABC-type oligopeptide transport system periplasmic component~InterPro IPR000914~KEGG: tpd:Teth39_1689 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 5~SPTR: Extracellular solute-binding protein%2C family 5%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 5 Middle gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0658 Toce_0659 Toce_0659 Toce_0659 663079 663999 + binding-protein-dependent transport systems inner membrane component COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: tpd:Teth39_1688 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0659 Toce_0660 Toce_0660 Toce_0660 664009 664941 + binding-protein-dependent transport systems inner membrane component COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components~InterPro IPR000515~KEGG: tex:Teth514_0548 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0660 Toce_0661 Toce_0661 Toce_0661 664955 665974 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component~InterProIPR003593:IPR003439:IPR010066:IPR017871:IPR 013563~KEGG: tpd:Teth39_1686 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0661 Toce_0662 Toce_0662 Toce_0662 665971 666933 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase~InterProIPR003593:IPR003439:IPR010066:IPR017871:IPR 013563~KEGG: tpd:Teth39_1685 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase~SPTR: Oligopeptide/dipeptide ABC transporter%2C ATPase subunit%3B~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B Oligopeptide/dipeptide transporter%2C C-terminal region~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATP-binding protein%2C C-terminal domain gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0662 Toce_0663 Toce_0663 Toce_0663 666983 667726 - PP-loop domain protein COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~InterPro IPR012089:IPR011063~KEGG: dau:Daud_0882 PP-loop domain-containing protein~PFAM: PP-loop domain protein~SPTR: PP-loop domain protein%3B~PFAM: PP-loop family gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0663 Toce_0664 Toce_0664 Toce_0664 667752 668795 - L-threonine aldolase COGs: COG2008 Threonine aldolase~InterPro IPR001597~KEGG: tte:TTE0267 threonine aldolase~PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase~SPTR: Threonine aldolase%3B~PFAM: Beta-eliminating lyase gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0664 Toce_0665 Toce_0665 Toce_0665 668924 669199 + acylphosphatase COGs: COG1254 Acylphosphatase~InterPro IPR001792:IPR017968~KEGG: tte:TTE1765 acylphosphatase~PFAM: acylphosphatase~SPTR: Acylphosphatase%3B~PFAM: Acylphosphatase gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0665 Toce_0666 Toce_0666 Toce_0666 669216 670556 + Recombination protein MgsA COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase~InterPro IPR003593:IPR003959~KEGG: tpd:Teth39_0710 recombination factor protein RarA~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~SPTR: AAA ATPase central domain protein%3B~PFAM: MgsA AAA+ ATPase C terminal%3B Holliday junction DNA helicase ruvB N-terminus gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0666 Toce_0667 Toce_0667 Toce_0667 670553 672259 + ABC transporter%2C ATPase%2C predicted COGs: COG3044 ATPase of the ABC class~InterPro IPR019195~KEGG: tit:Thit_0992 ABC transporter%2C ATPase%2C predicted~PFAM: ABC transporter%2C ATPase%2C predicted~SPTR: ATPase of the ABC class-like protein%3B~PFAM: Predicted ATPase of the ABC class gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0667 Toce_0668 Toce_0668 Toce_0668 672461 673315 + putative transmembrane anti-sigma factor KEGG: hor:Hore_03980 putative transmembrane anti-sigma factor~SPTR: Putative transmembrane anti-sigma factor gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0668 Toce_0669 Toce_0669 Toce_0669 673432 673842 + protein of unknown function UPF0047 COGs: COG0432 conserved hypothetical protein~InterPro IPR001602~KEGG: trq:TRQ2_0947 hypothetical protein~PFAM: protein of unknown function UPF0047~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family UPF0047~TIGRFAM: conserved hypothetical protein TIGR00149 gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0669 Toce_0670 Toce_0670 Toce_0670 673918 674232 + conserved hypothetical protein KEGG: ptm:GSPATT00004091001 hypothetical protein~SPTR: Chromosome undetermined scaffold_9%2C whole genome shotgun sequence gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0670 Toce_0671 Toce_0671 Toce_0671 674348 675172 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR017894:IPR001584~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0671 Toce_0672 Toce_0672 Toce_0672 675175 675613 + pseudogene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0672 Toce_0673 Toce_0673 Toce_0673 675826 676137 - transposase IS3/IS911 family protein InterPro IPR002514~KEGG: swo:Swol_2510 transposase IS3/IS911~PFAM: transposase IS3/IS911 family protein~SPTR: Transposase IS3/IS911%3B~PFAM: Transposase gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0673 Toce_0674 Toce_0674 Toce_0674 676237 676827 + hypothetical protein KEGG: csc:Csac_2572 glycosyl transferase%2C group 1~SPTR: Putative uncharacterized protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0674 Toce_0675 Toce_0675 Toce_0675 677130 677342 + hypothetical protein KEGG: cbc:CbuK_0596 NADH-quinone oxidoreductase chain K~SPTR: NADH dehydrogenase (Ubiquinone)%2C K subunit gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0675 Toce_0676 Toce_0676 Toce_0676 677542 678051 + Abortive infection protein InterPro IPR003675~KEGG: tfu:Tfu_1444 hypothetical protein~PFAM: Abortive infection protein~SPTR: Putative uncharacterized protein%3B~PFAM: CAAX amino terminal protease family gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0676 Toce_0677 Toce_0677 Toce_0677 678048 678158 + hypothetical protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0677 Toce_0678 Toce_0678 Toce_0678 678384 678911 + major facilitator superfamily MFS_1 KEGG: kol:Kole_1187 major facilitator superfamily MFS_1~SPTR: Major facilitator superfamily MFS_1%3B~manually curated gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0678 Toce_0679 Toce_0679 Toce_0679 679176 679556 + permease of the major facilitator superfamily KEGG: dat:HRM2_41620 permease of the major facilitator superfamily~SPTR: Permease of the major facilitator superfamily gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0679 Toce_0680 Toce_0680 Toce_0680 679795 679983 + hypothetical protein KEGG: lsl:LSL_0694 hypothetical protein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0680 Toce_0681 Toce_0681 Toce_0681 680289 680672 + hypothetical protein InterPro IPR011759~KEGG: aae:aq_1502 hypothetical protein~SPTR: Putative uncharacterized protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0681 Toce_0682 Toce_0682 Toce_0682 680783 681136 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: rrs:RoseRS_4091 DNA polymerase beta subunit~PFAM: DNA polymerase beta domain protein region~SPTR: DNA polymerase%2C beta domain protein region%3B~PFAM: Nucleotidyltransferase domain gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0682 Toce_0683 Toce_0683 Toce_0683 681108 681527 + HEPN domain protein COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN~InterPro IPR007842~KEGG: adg:Adeg_0040 HEPN domain protein~PFAM: HEPN domain protein~SMART: HEPN domain protein~SPTR: HEPN domain protein%3B~PFAM: HEPN domain gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0683 Toce_0684 Toce_0684 Toce_0684 681964 684612 + valyl-tRNA synthetase COGs: COG0525 Valyl-tRNA synthetase~InterProIPR002303:IPR001412:IPR019754:IPR002300:IPR 013155:IPR019499~KEGG: tte:TTE0781 valyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ia%3B tRNA synthetase valyl/leucyl anticodon-binding%3B Valyl-tRNA synthetase%2C class Ia%2C tRNA binding arm~SPTR: Valyl-tRNA synthetase%3B~TIGRFAM: valyl-tRNA synthetase~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain%3B Valyl tRNA synthetase tRNA binding arm~TIGRFAM: valyl-tRNA synthetase gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0684 Toce_0685 Toce_0685 Toce_0685 684652 685956 + FolC bifunctional protein COGs: COG0285 Folylpolyglutamate synthase~InterPro IPR001645:IPR018109:IPR013221:IPR004101~KEGG: aoe:Clos_2028 FolC bifunctional protein~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~SPTR: FolC bifunctional protein%3B~TIGRFAM: FolC bifunctional protein~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0685 Toce_0686 Toce_0686 Toce_0686 686010 686261 + conserved hypothetical protein KEGG: cac:CAC0128 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2508) gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0686 Toce_0687 Toce_0687 Toce_0687 686381 687415 + ApbE family lipoprotein COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis~InterPro IPR003374~KEGG: tte:TTE2482 thiamine biosynthesis lipoprotein~PFAM: ApbE family lipoprotein~SPTR: ApbE family lipoprotein%3B~PFAM: ApbE family gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0687 Toce_0688 Toce_0688 Toce_0688 687535 688167 + CoA-binding domain protein COGs: COG2344 AT-rich DNA-binding protein~InterPro IPR009718:IPR003781~KEGG: drm:Dred_2551 redox-sensing transcriptional repressor REX~PFAM: CoA-binding domain protein%3B Rex DNA-binding domain protein~SPTR: Redox-sensing transcriptional repressor rex%3B~PFAM: CoA binding domain%3B Putative DNA-binding protein N-terminus gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0688 Toce_0689 Toce_0689 Toce_0689 688164 688577 + conserved hypothetical protein KEGG: tex:Teth514_2147 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: DRTGG domain gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0689 Toce_0690 Toce_0690 Toce_0690 688594 689126 + pseudogene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0690 Toce_0691 Toce_0691 Toce_0691 689148 689492 + HPr kinase KEGG: nth:Nther_0094 HPr kinase~SPTR: HPr kinase%3B~PFAM: DRTGG domain gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0691 Toce_0692 Toce_0692 Toce_0692 689486 689926 + pseudogene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0692 Toce_0693 Toce_0693 Toce_0693 690131 690619 + NAD(P)-dependent iron-only hydrogenase diaphorase component iron-sulfur protein COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit~InterPro IPR002023~KEGG: cth:Cthe_0338 NADH-quinone oxidoreductase%2C E subunit~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~SPTR: NADH-quinone oxidoreductase%2C E subunit%3B~TIGRFAM: NADH-quinone oxidoreductase%2C E subunit~PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit~TIGRFAM: NADH-quinone oxidoreductase%2C E subunit gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0693 Toce_0694 Toce_0694 Toce_0694 690625 691185 + histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterPro IPR003594:IPR005467:IPR004358~KEGG: cpy:Cphy_3802 histidine kinase~PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~SPTR: Histidine kinase%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0694 Toce_0695 Toce_0695 Toce_0695 691176 691550 + NAD(P)-dependent iron-only hydrogenase iron-sulfur protein KEGG: tit:Thit_0828 hypothetical protein~SPTR: Putative uncharacterized protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0695 Toce_0696 Toce_0696 Toce_0696 691581 693374 + NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit~InterProIPR017896:IPR017900:IPR001949:IPR009737:IPR 011538:IPR019554:IPR019575~KEGG: ate:Athe_1298 NADH dehydrogenase (quinone)~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Sucraseferredoxin family protein%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding~PRIAM: NADH dehydrogenase (quinone)~SPTR: NADH dehydrogenase (Quinone)%3B~PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region%3B 4Fe-4S binding domain%3B Respiratory-chain NADH dehydrogenase 24 Kd subunit%3B Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0696 Toce_0697 Toce_0697 Toce_0697 693397 695172 + NAD(P)-dependent iron-only hydrogenase catalytic subunit COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterProIPR001041:IPR017896:IPR013352:IPR017900:IPR 019574:IPR004108:IPR003149~KEGG: csc:Csac_1864 hydrogenase%2C Fe-only~PFAM: hydrogenase large subunit domain protein%3B NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B ferredoxin%3B iron hydrogenase small subunit~SPTR: Hydrogenase%2C Fe-only%3B~TIGRFAM: hydrogenase%2C Fe-only~PFAM: 2Fe-2S iron-sulfur cluster binding domain%3B Iron only hydrogenase large subunit%2C C-terminal domain%3B NADH-ubiquinone oxidoreductase-G iron-sulfur binding region%3B Iron hydrogenase small subunit~TIGRFAM: hydrogenases%2C Fe-only gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0697 Toce_0698 Toce_0698 Toce_0698 695432 696748 + electron transport complex%2C RnfABCDGE type%2C C subunit COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC~InterProIPR017896:IPR010208:IPR017900:IPR011538:IPR 019554~KEGG: amt:Amet_2280 electron transport complex%2C RnfABCDGE type%2C C subunit~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain~SPTR: Electron transport complex%2C RnfABCDGE type%2C C subunit%3B~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C C subunit~PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C C subunit gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0698 Toce_0699 Toce_0699 Toce_0699 696840 697763 + electron transport complex%2C RnfABCDGE type%2C D subunit COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD~InterPro IPR011303:IPR004338~KEGG: hor:Hore_14340 electron transport complex%2C RnfABCDGE type%2C D subunit~PFAM: NQR2 and RnfD family protein~SPTR: Electron transport complex%2C RnfABCDGE type%2C D subunit%3B~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C D subunit~PFAM: NQR2%2C RnfD%2C RnfE family~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C D subunit gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0699 Toce_0700 Toce_0700 Toce_0700 697760 698302 + electron transport complex%2C RnfABCDGE type%2C G subunit COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG~InterPro IPR010209:IPR007329~KEGG: hor:Hore_14330 electron transport complex%2C RnfABCDGE type%2C G subunit~PFAM: FMN-binding domain protein~SPTR: Electron transport complex%2C RnfABCDGE type%2C G subunit%3B~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C G subunit~PFAM: FMN-binding domain~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C G subunit gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0700 Toce_0701 Toce_0701 Toce_0701 698302 698916 + electron transport complex%2C RnfABCDGE type%2C E subunit COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE~InterPro IPR010968:IPR003667~KEGG: hor:Hore_14320 electron transport complex%2C RnfABCDGE type%2C E subunit~PFAM: RnfA-Nqr electron transport subunit~SPTR: Electron transport complex%2C RnfABCDGE type%2C E subunit%3B~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C E subunit~PFAM: Rnf-Nqr subunit%2C membrane protein~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C E subunit gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0701 Toce_0702 Toce_0702 Toce_0702 698932 699516 + electron transport complex%2C RnfABCDGE type%2C A subunit COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA~InterPro IPR011293:IPR003667~KEGG: hor:Hore_14310 electron transport complex%2C RnfABCDGE type%2C A subunit~PFAM: RnfA-Nqr electron transport subunit~SPTR: Electron transport complex%2C RnfABCDGE type%2C A subunit%3B~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C A subunit~PFAM: Rnf-Nqr subunit%2C membrane protein~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C A subunit gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0702 Toce_0703 Toce_0703 Toce_0703 699541 700578 + electron transport complex%2C RnfABCDGE type%2C B subunit COGs: COG2878 NADH:ubiquinone oxidoreductase subunit RnfB~InterPro IPR017896:IPR010207:IPR017900:IPR007202~KEGG: hor:Hore_14300 electron transport complex%2C RnfABCDGE type%2C B subunit~PFAM: Fe-S cluster domain protein~SPTR: Electron transport complex%2C RnfABCDGE type%2C B subunit%3B~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C B subunit~PFAM: Putative Fe-S cluster%3B 4Fe-4S binding domain~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C B subunit gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0703 Toce_0704 Toce_0704 Toce_0704 700765 702108 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE0846 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0704 Toce_0705 Toce_0705 Toce_0705 702187 702357 - hypothetical protein KEGG: mca:MCA1441 UbiE/COQ5 family methlytransferase~SPTR: Methyltransferase type 11 gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0705 Toce_0706 Toce_0706 Toce_0706 702522 703184 + methyltransferase cognate corrinoid protein COGs: COG5012 cobalamin binding protein~InterPro IPR006158:IPR003759:IPR012741~KEGG: swo:Swol_0418 cobalamin-dependent methionine synthase%2C B12-binding~PFAM: cobalamin B12-binding domain protein%3B Methionine synthase B12-binding module cap domain protein~SPTR: Dimethylamine corrinoid protein%3B~TIGRFAM: methyltransferase cognate corrinoid protein~PFAM: B12 binding domain~TIGRFAM: methyltransferase cognate corrinoid proteins%2C Methanosarcina family gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0706 Toce_0707 Toce_0707 Toce_0707 703196 704218 + methyltransferase MtaA/CmuA family COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR006360:IPR000257~KEGG: mmp:MMP0831 methylcobalamin:coenzyme M methyltransferase~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Uroporphyrinogen decarboxylase (URO-D)%3B~TIGRFAM: methyltransferase MtaA/CmuA family~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0707 Toce_0708 Toce_0708 Toce_0708 704219 705103 + Uroporphyrinogen-III decarboxylase COGs: COG0407 Uroporphyrinogen-III decarboxylase~KEGG: dae:Dtox_2801 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0708 Toce_0709 Toce_0709 Toce_0709 705072 706916 + ferredoxin COGs: COG3894 Uncharacterized metal-binding protein~InterPro IPR001041~KEGG: swo:Swol_0420 hypothetical protein~PFAM: ferredoxin~SPTR: Putative uncharacterized protein%3B~PFAM: 2Fe-2S iron-sulfur cluster binding domain gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0709 Toce_0710 Toce_0710 Toce_0710 706892 707956 + Uroporphyrinogen decarboxylase (URO-D) COGs: COG0407 Uroporphyrinogen-III decarboxylase~InterPro IPR000257~KEGG: fpl:Ferp_1758 uroporphyrinogen decarboxylase (URO-D)~PFAM: Uroporphyrinogen decarboxylase (URO-D)~SPTR: Uroporphyrinogen decarboxylase (URO-D)%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D)~TIGRFAM: methyltransferase%2C MtaA/CmuA family gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0710 Toce_0711 Toce_0711 Toce_0711 707934 708863 + cystathionine beta-synthase (acetylserine-dependent) COGs: COG0031 Cysteine synthase~InterPro IPR005856:IPR005859:IPR001216:IPR001926~KEGG: gtn:GTNG_2474 O-acetylserine lyase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: Cysteine synthase%3B~TIGRFAM: cysteine synthase%3B cysteine synthase A~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0711 Toce_0712 Toce_0712 Toce_0712 708866 709999 + cystathionine gamma-lyase COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR000358:IPR000277~KEGG: gwc:GWCH70_2474 cystathionine gamma-synthase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~SPTR: Cystathionine gamma-synthase%3B~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: cystathionine beta-lyase%2C eukaryotic gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0712 Toce_0713 Toce_0713 Toce_0713 710107 710379 + hypothetical protein KEGG: aoe:Clos_1055 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2933) gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0713 Toce_0714 Toce_0714 Toce_0714 710372 710932 + conserved hypothetical protein KEGG: aoe:Clos_1061 hypothetical protein~SPTR: Putative uncharacterized protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0714 Toce_0715 Toce_0715 Toce_0715 710941 711681 + cytochrome c biogenesis protein transmembrane region COGs: COG0785 Cytochrome c biogenesis protein~InterPro IPR003834~KEGG: csc:Csac_0411 cytochrome c biogenesis protein%2C transmembrane region~PFAM: cytochrome c biogenesis protein transmembrane region~SPTR: Cytochrome c biogenesis protein transmembrane region%3B~PFAM: Cytochrome C biogenesis protein transmembrane region gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0715 Toce_0716 Toce_0716 Toce_0716 711696 712421 + prolipoprotein diacylglyceryl transferase COGs: COG0682 Prolipoprotein diacylglyceryltransferase~InterPro IPR001640~KEGG: amt:Amet_3254 prolipoprotein diacylglyceryl transferase~PFAM: prolipoprotein diacylglyceryl transferase~SPTR: Prolipoprotein diacylglyceryl transferase%3B~TIGRFAM: prolipoprotein diacylglyceryl transferase~PFAM: Prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0716 Toce_0717 Toce_0717 Toce_0717 712443 712712 + pseudogene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0717 Toce_0718 Toce_0718 Toce_0718 712981 713238 + Protein of unknown function DUF2078%2C membrane InterPro IPR018649~KEGG: sat:SYN_02429 hypothetical protein~PFAM: Protein of unknown function DUF2078%2C membrane~SPTR: Hypothetical membrane protein%3B~PFAM: Predicted membrane protein (DUF2078) gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0718 Toce_0719 Toce_0719 Toce_0719 713533 715008 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0719 Toce_0720 Toce_0720 Toce_0720 715186 715365 - YHS domain protein COGs: COG3350 conserved hypothetical protein~InterPro IPR011017:IPR007029~KEGG: dtu:Dtur_1579 YHS domain protein~PFAM: YHS domain protein~SMART: TRASH domain protein~SPTR: YHS domain protein%3B~PFAM: YHS domain gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0720 Toce_0721 Toce_0721 Toce_0721 715498 715786 + pseudogene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0721 Toce_0722 Toce_0722 Toce_0722 715917 718328 + copper-translocating P-type ATPase COGs: COG2217 Cation transport ATPase~InterProIPR006121:IPR006403:IPR006416:IPR001757:IPR 018303:IPR017969:IPR001756:IPR001877:IPR008250:IPR005834~KEGG: tte:TTE2463 cation transport ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Copper-translocating P-type ATPase%3B~TIGRFAM: copper-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B copper ion binding protein%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0722 Toce_0723 Toce_0723 Toce_0723 718343 718486 + conserved hypothetical protein KEGG: cbf:CLI_1266 hypothetical protein~SPTR: Putative uncharacterized protein gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0723 Toce_0724 Toce_0724 Toce_0724 718665 720141 + pseudogene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0724 Toce_0725 Toce_0725 Toce_0725 720273 720626 + Protein of unknown function DUF2512 InterPro IPR019649~KEGG: nth:Nther_1861 hypothetical protein~PFAM: Protein of unknown function DUF2512~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2512) gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0725 Toce_0726 Toce_0726 Toce_0726 720683 721258 - manganese containing catalase COGs: COG3546 Mn-containing catalase~InterPro IPR007760~KEGG: hmo:HM1_1323 manganese-containing%2C non-heme catalase~PFAM: manganese containing catalase~SPTR: Manganese-containing%2C non-heme catalase%3B~PFAM: Manganese containing catalase gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0726 Toce_0727 Toce_0727 Toce_0727 721277 721537 - conserved hypothetical protein InterPro IPR016571~KEGG: tpd:Teth39_0700 hypothetical protein~SPTR: Putative uncharacterized protein gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0727 Toce_0728 Toce_0728 Toce_0728 721563 721739 - hypothetical protein KEGG: pth:PTH_0184 hypothetical protein~SPTR: Putative uncharacterized protein gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0728 Toce_0729 Toce_0729 Toce_0729 721866 721997 - hypothetical protein KEGG: dvi:Dvir_GJ19935 GJ19935 gene product from transcript GJ19935-RA~SPTR: GJ19935 gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0729 Toce_0730 Toce_0730 Toce_0730 722192 723412 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR005829:IPR001411:IPR011701~KEGG: mta:Moth_0116 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0730 Toce_0731 Toce_0731 Toce_0731 723440 724381 - cysteine synthase COGs: COG0031 Cysteine synthase~InterPro IPR005856:IPR005859:IPR001216:IPR001926~KEGG: mta:Moth_1706 cysteine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: Cysteine synthase%3B~TIGRFAM: cysteine synthase A%3B cysteine synthase~PFAM: Pyridoxal-phosphate dependent enzyme~TIGRFAM: cysteine synthase A%3B cysteine synthases gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0731 Toce_0732 Toce_0732 Toce_0732 724399 725802 - UBA/THIF-type NAD/FAD binding protein COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2~InterPro IPR000594:IPR007901~KEGG: mta:Moth_1970 UBA/ThiF-type NAD/FAD binding fold~PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein~SPTR: UBA/THIF-type NAD/FAD binding fold%3B~PFAM: MoeZ/MoeB domain%3B ThiF family gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0732 Toce_0733 Toce_0733 Toce_0733 725935 726489 - BioY protein COGs: COG1268 conserved hypothetical protein~InterPro IPR003784~KEGG: tte:TTE0777 uncharacterized ACR~PFAM: BioY protein~SPTR: Uncharacterized ACR%3B~PFAM: BioY family gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0733 Toce_0734 Toce_0734 Toce_0734 726688 726927 + copper ion binding protein COGs: COG2608 Copper chaperone~InterPro IPR006121:IPR006122:IPR017969:IPR001802~KEGG: nth:Nther_1097 copper ion binding protein~PFAM: Heavy metal transport/detoxification protein~SPTR: Copper ion binding protein%3B~TIGRFAM: copper ion binding protein~PFAM: Heavy-metal-associated domain~TIGRFAM: copper ion binding protein gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0734 Toce_0735 Toce_0735 Toce_0735 727066 727449 + protein of unknown function DUF1312 COGs: COG5341 conserved hypothetical protein~InterPro IPR010739~KEGG: tpd:Teth39_2118 hypothetical protein~PFAM: protein of unknown function DUF1312~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1312) gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0735 Toce_0736 Toce_0736 Toce_0736 727476 728006 + Heptaprenyl diphosphate synthase component I COGs: COG4769 membrane protein~InterPro IPR014535:IPR010898~KEGG: aoe:Clos_1769 heptaprenyl diphosphate synthase component I~PFAM: Heptaprenyl diphosphate synthase component I~SPTR: Heptaprenyl diphosphate synthase component I%3B~PFAM: Heptaprenyl diphosphate synthase component I gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0736 Toce_0737 Toce_0737 Toce_0737 728011 728259 + conserved hypothetical protein KEGG: dtu:Dtur_1099 hypothetical protein~SPTR: Putative uncharacterized protein gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0737 Toce_0738 Toce_0738 Toce_0738 728272 728850 + maf protein COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation~InterPro IPR003697~KEGG: nth:Nther_0513 maf protein~PFAM: Maf family protein~SPTR: Maf protein%3B~TIGRFAM: maf protein~PFAM: Maf-like protein~TIGRFAM: MAF protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0738 Toce_0739 Toce_0739 Toce_0739 728847 729560 + DNA replication and repair protein RadC COGs: COG2003 DNA repair protein~InterPro IPR000253:IPR001405:IPR020891:IPR020854~KEGG: tpd:Teth39_1453 DNA repair protein RadC~PFAM: DNA repair protein RadC~SPTR: DNA repair protein RadC%3B~TIGRFAM: DNA repair protein RadC~PFAM: Protein of unknown function (DUF2466)~TIGRFAM: DNA repair protein radc gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0739 Toce_0740 Toce_0740 Toce_0740 729599 730633 + rod shape-determining protein MreB COGs: COG1077 Actin-like ATPase involved in cell morphogenesis~InterPro IPR004753~KEGG: amt:Amet_2290 rod shape-determining protein MreB~PFAM: cell shape determining protein MreB/Mrl~SPTR: Cell shape determining protein%2C MreB/Mrl family%3B~TIGRFAM: cell shape determining protein%2C MreB/Mrl family~PFAM: MreB/Mbl protein~TIGRFAM: cell shape determining protein%2C MreB/Mrl family gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0740 Toce_0741 Toce_0741 Toce_0741 730649 731497 + rod shape-determining protein MreC COGs: COG1792 Cell shape-determining protein~InterPro IPR005223:IPR007221~KEGG: tte:TTE0899 rod shape-determining protein MreC~PFAM: Rod shape-determining protein MreC~SPTR: Rod shape-determining protein MreC%3B~TIGRFAM: rod shape-determining protein MreC~PFAM: rod shape-determining protein MreC~TIGRFAM: rod shape-determining protein MreC gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0741 Toce_0742 Toce_0742 Toce_0742 731501 732001 + rod shape-determining protein MreD InterPro IPR007227:IPR017225~KEGG: dae:Dtox_3337 rod shape-determining protein MreD~SPTR: Rod shape-determining protein MreD%3B~TIGRFAM: rod shape-determining protein MreD~PFAM: rod shape-determining protein MreD~TIGRFAM: rod shape-determining protein MreD gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0742 Toce_0743 Toce_0743 Toce_0743 732020 734107 + penicillin-binding protein 2 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR017790:IPR018247:IPR005311:IPR001460~KEGG: chy:CHY_0345 peptidoglycan biosynthesis transpeptidase~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain~PRIAM: Peptidoglycan glycosyltransferase~SPTR: Peptidoglycan glycosyltransferase%3B~TIGRFAM: penicillin-binding protein 2~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain~TIGRFAM: penicillin-binding protein 2 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0743 Toce_0744 Toce_0744 Toce_0744 734215 734823 + septum site-determining protein MinC COGs: COG0850 Septum formation inhibitor~InterPro IPR013033:IPR005526~KEGG: amt:Amet_2294 septum site-determining protein MinC~PFAM: Septum formation inhibitor MinC~SPTR: Septum site-determining protein MinC%3B~TIGRFAM: septum site-determining protein MinC~PFAM: Septum formation inhibitor MinC%2C C-terminal domain%3B Septum formation inhibitor MinC%2C N-terminal domain~TIGRFAM: septum site-determining protein MinC gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0744 Toce_0745 Toce_0745 Toce_0745 734857 735663 + septum site-determining protein MinD COGs: COG2894 Septum formation inhibitor-activating ATPase~InterPro IPR010223~KEGG: dhd:Dhaf_4346 septum site-determining protein MinD~SPTR: Putative uncharacterized protein%3B~TIGRFAM: septum site-determining protein MinD~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain~TIGRFAM: septum site-determining protein MinD gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0745 Toce_0746 Toce_0746 Toce_0746 735677 735958 + cell division topological specificity factor MinE InterPro IPR005527~KEGG: amt:Amet_2296 cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~SPTR: Cell division topological specificity factor%3B~TIGRFAM: cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0746 Toce_0747 Toce_0747 Toce_0747 736073 737170 + cell elongation-specific peptidoglycan biosynthesis regulator RodA COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR011923:IPR006162:IPR018365:IPR001182~KEGG: dae:Dtox_3332 rod shape-determining protein RodA~PFAM: cell cycle protein~SPTR: Rod shape-determining protein RodA%3B~TIGRFAM: rod shape-determining protein RodA~PFAM: Cell cycle protein~TIGRFAM: rod shape-determining protein RodA%3B cell division protein FtsW gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0747 Toce_0748 Toce_0748 Toce_0748 737298 738011 + Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: tte:TTE0907 membrane proteins related to metalloendopeptidase~PFAM: Peptidase M23~SPTR: Membrane proteins related to metalloendopeptidases%3B~PFAM: Peptidase family M23 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0748 Toce_0749 Toce_0749 Toce_0749 738022 738888 + peptidase M50 InterPro IPR008915~KEGG: nth:Nther_0524 peptidase M50~PFAM: peptidase M50~SPTR: Peptidase M50%3B~PFAM: Peptidase family M50 gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0749 Toce_0750 Toce_0750 Toce_0750 738925 740781 + Radical SAM domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR006638:IPR007197~KEGG: tit:Thit_0845 radical SAM domain protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0750 Toce_0751 Toce_0751 Toce_0751 740759 741433 + Protein of unknown function DUF2344 COGs: COG5011 conserved hypothetical protein~InterPro IPR018768~KEGG: dau:Daud_1454 hypothetical protein~PFAM: Protein of unknown function DUF2344~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2344) gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0751 Toce_0752 Toce_0752 Toce_0752 741459 743150 + RNAse G COGs: COG1530 Ribonuclease G and E~InterProIPR003029:IPR002792:IPR004659:IPR018247:IPR 000463:IPR019307~KEGG: sth:STH426 ribonuclease G~PFAM: RNA-binding protein AU-1/Ribonuclease E/G%3B RNA binding S1 domain protein%3B deoxyribonuclease/rho motif-related TRAM~SPTR: Ribonuclease G%3B~TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: Ribonuclease E/G family%3B TRAM domain%3B S1 RNA binding domain~TIGRFAM: ribonuclease%2C Rne/Rng family gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0752 Toce_0753 Toce_0753 Toce_0753 743272 744747 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0753 Toce_0754 Toce_0754 Toce_0754 744793 745167 - hypothetical protein KEGG: mta:Moth_0203 hypothetical protein~SPTR: Putative uncharacterized protein gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0754 Toce_0755 Toce_0755 Toce_0755 745298 745636 - hypothetical protein KEGG: tva:TVAG_551850 Formin Homology 2 Domain containing protein~SPTR: Formin Homology 2 Domain containing protein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0755 Toce_0756 Toce_0756 Toce_0756 745633 745842 - hypothetical protein KEGG: pfa:PFL2390c conserved Plasmodium protein~SPTR: Conserved Plasmodium protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0756 Toce_0757 Toce_0757 Toce_0757 745975 746469 + cell wall hydrolase SleB COGs: COG3773 Cell wall hydrolyses involved in spore germination~InterPro IPR011105~KEGG: chy:CHY_1160 putative spore cortex-lytic enzyme~PFAM: cell wall hydrolase SleB~SPTR: Putative spore cortex-lytic enzyme%3B~PFAM: Cell Wall Hydrolase gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0757 Toce_0758 Toce_0758 Toce_0758 746489 747841 + germination protein YpeB InterPro IPR014239:IPR005075~KEGG: drm:Dred_3194 peptidase~PFAM: Propeptide PepSY amd peptidase M4~SPTR: Propeptide%2C PepSY amd peptidase M4%3B~TIGRFAM: germination protein YpeB~TIGRFAM: germination protein YpeB gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0758 Toce_0759 Toce_0759 Toce_0759 748096 748443 + hypothetical protein KEGG: rsq:Rsph17025_1058 hypothetical protein~SPTR: Pneumococcal surface protein A gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0759 Toce_0760 Toce_0760 Toce_0760 748609 749244 - conserved hypothetical protein KEGG: dae:Dtox_2548 hypothetical protein~SPTR: Putative uncharacterized protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0760 Toce_0761 Toce_0761 Toce_0761 749568 751481 + carbon-monoxide dehydrogenase%2C catalytic subunit COGs: COG1151 6Fe-6S prismane cluster-containing protein~InterPro IPR010047:IPR004137~KEGG: dhd:Dhaf_1166 carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane~PRIAM: Carbon-monoxide dehydrogenase (acceptor)~SPTR: Carbon-monoxide dehydrogenase%2C catalytic subunit%3B~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0761 Toce_0762 Toce_0762 Toce_0762 752138 752566 + NUDIX hydrolase COGs: COG1051 ADP-ribose pyrophosphatase~InterPro IPR020084:IPR000086~KEGG: tte:TTE2249 NTP pyrophosphohydrolase including oxidative damage repair enzyme~PFAM: NUDIX hydrolase~SPTR: NTP pyrophosphohydrolases including oxidative damage repair enzymes%3B~PFAM: NUDIX domain gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0762 Toce_0763 Toce_0763 Toce_0763 752712 753026 + LSU ribosomal protein L21P COGs: COG0261 Ribosomal protein L21~InterPro IPR001787:IPR018258~KEGG: tte:TTE0913 50S ribosomal protein L21~PFAM: ribosomal protein L21~SPTR: 50S ribosomal protein L21%3B~TIGRFAM: ribosomal protein L21~PFAM: Ribosomal prokaryotic L21 protein~TIGRFAM: ribosomal protein L21 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0763 Toce_0764 Toce_0764 Toce_0764 753023 753361 + protein of unknown function DUF464 COGs: COG2868 ribosomal protein~InterPro IPR007422~KEGG: cth:Cthe_0161 hypothetical protein~PFAM: protein of unknown function DUF464~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF464) gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0764 Toce_0765 Toce_0765 Toce_0765 753363 753647 + LSU ribosomal protein L27P COGs: COG0211 Ribosomal protein L27~InterPro IPR001684:IPR018261~KEGG: tpd:Teth39_1433 50S ribosomal protein L27~PFAM: ribosomal protein L27~SPTR: Ribosomal protein L27%3B~TIGRFAM: ribosomal protein L27~PFAM: Ribosomal L27 protein~TIGRFAM: ribosomal protein L27 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0765 Toce_0766 Toce_0766 Toce_0766 753726 754355 + hypothetical protein KEGG: dae:Dtox_0401 signal transduction histidine kinase regulating citrate/malate metabolism~SPTR: Signal transduction histidine kinase regulating citrate/malate metabolism gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0766 Toce_0767 Toce_0767 Toce_0767 754414 755682 + GTP-binding protein Obg/CgtA COGs: COG0536 GTPase~InterProIPR014100:IPR005225:IPR015349:IPR006074:IPR 006073:IPR006169:IPR002917~KEGG: chy:CHY_0370 GTPase ObgE~PFAM: GTP1/OBG sub domain protein%3B GTP-binding protein HSR1-related%3B GTP1/OBG domain protein~SPTR: GTPase obg%3B~TIGRFAM: GTP-binding protein Obg/CgtA%3B small GTP-binding protein%3B Obg family GTPase CgtA~PFAM: GTPase of unknown function%3B Domain of unknown function (DUF1967)%3B GTP1/OBG~TIGRFAM: Obg family GTPase CgtA%3B Obg family GTPase CgtA%2C C-terminal extension%3B small GTP-binding protein domain gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0767 Toce_0768 Toce_0768 Toce_0768 755742 756356 + nicotinate-nucleotide adenylyltransferase COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase~InterPro IPR004821:IPR005248:IPR004820~KEGG: tpd:Teth39_1429 nicotinic acid mononucleotide adenylyltransferase~PFAM: cytidylyltransferase~PRIAM: Nicotinate-nucleotide adenylyltransferase~SPTR: Nicotinate (Nicotinamide) nucleotide adenylyltransferase%3B~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: Cytidylyltransferase%3B Cytidylyltransferase C-terminal domain (DUF2432)~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0768 Toce_0769 Toce_0769 Toce_0769 756363 756950 + metal dependent phosphohydrolase COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism~InterPro IPR003607:IPR005249:IPR006675:IPR006674~KEGG: tte:TTE0919 HD superfamily hydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Predicted HD superfamily hydrolase involved in NAD metabolism%3B~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: conserved hypothetical protein TIGR00488%3B uncharacterized domain HDIG gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0769 Toce_0770 Toce_0770 Toce_0770 756947 758125 + cell envelope-related transcriptional attenuator COGs: COG1316 Transcriptional regulator~InterPro IPR004474~KEGG: tte:TTE0920 transcriptional regulator~PFAM: cell envelope-related transcriptional attenuator~SPTR: Transcriptional regulator%3B~TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: Cell envelope-related transcriptional attenuator domain~TIGRFAM: cell envelope-related function transcriptional attenuator common domain gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0770 Toce_0771 Toce_0771 Toce_0771 758140 758517 + iojap-like protein COGs: COG0799 Iojap protein~InterPro IPR004394~KEGG: pth:PTH_0837 hypothetical protein~PFAM: Iojap-related protein~SPTR: Iojap-related protein%3B~TIGRFAM: iojap-like protein~PFAM: Domain of unknown function DUF143~TIGRFAM: iojap-related protein gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0771 Toce_0772 Toce_0772 Toce_0772 758755 761208 + leucyl-tRNA synthetase COGs: COG0495 Leucyl-tRNA synthetase~InterPro IPR002302:IPR001412:IPR015413:IPR013155~KEGG: chy:CHY_0393 leucyl-tRNA synthetase~PFAM: tRNA synthetase valyl/leucyl anticodon-binding%3B tRNA synthetase class I (M)~SPTR: Leucyl-tRNA synthetase%3B~TIGRFAM: leucyl-tRNA synthetase~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain~TIGRFAM: leucyl-tRNA synthetase%2C eubacterial and mitochondrial family gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0772 Toce_0773 Toce_0773 Toce_0773 761333 761968 + competence protein ComEA helix-hairpin-helix repeat protein COGs: COG1555 DNA uptake protein and related DNA-binding protein~InterPro IPR003583:IPR004509:IPR019554:IPR000445~KEGG: mta:Moth_0570 competence protein ComEA helix-hairpin-helix region~PFAM: Soluble ligand binding domain%3B helix-hairpin-helix motif~SMART: Helix-hairpin-helix DNA-binding class 1~SPTR: Competence protein ComEA helix-hairpin-helix region%3B~TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein~PFAM: SLBB domain%3B Helix-hairpin-helix motif~TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region%3B comEA protein gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0773 Toce_0774 Toce_0774 Toce_0774 761988 763394 + L-seryl-tRNA selenium transferase COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]~InterPro IPR004534:IPR018319~KEGG: geo:Geob_0561 selenocysteine synthase~PFAM: Pyridoxal phosphate-dependent transferase~PRIAM: L-seryl-tRNA(Sec) selenium transferase~SPTR: L-seryl-tRNA(Sec) selenium transferase%3B~TIGRFAM: L-seryl-tRNA selenium transferase~PFAM: Selenocysteine synthase N terminal%3B L-seryl-tRNA selenium transferase~TIGRFAM: seryl-tRNA(sec) selenium transferase gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0774 Toce_0775 Toce_0775 Toce_0775 763391 765310 + selenocysteine-specific translation elongation factor COGs: COG3276 Selenocysteine-specific translation elongation factor~InterProIPR005225:IPR004535:IPR000795:IPR004161:IPR 015190:IPR015191~KEGG: pth:PTH_1427 selenocysteine-specific translation elongation factor~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B Elongation factor SelB winged helix 2%3B Elongation factor SelB winged helix 3~PRIAM: Sulfate adenylyltransferase~SPTR: Selenocysteine-specific translation elongation factor%3B~TIGRFAM: selenocysteine-specific translation elongation factor%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu GTP binding domain%3B Elongation factor SelB%2C winged helix~TIGRFAM: selenocysteine-specific elongation factor SelB%3B small GTP-binding protein domain%3B translation elongation factor TU gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0775 Toce_0776 Toce_0776 Toce_0776 765569 766924 + MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: nth:Nther_0991 MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~SPTR: MATE efflux family protein%3B~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0776 Toce_0777 Toce_0777 Toce_0777 767165 767968 + formate/nitrite transporter COGs: COG2116 Formate/nitrite family of transporter~InterPro IPR000292~KEGG: cdl:CDR20291_3225 putative formate/nitrite transporter~PFAM: formate/nitrite transporter~SPTR: Putative uncharacterized protein%3B~PFAM: Formate/nitrite transporter~TIGRFAM: formate/nitrite transporter gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0777 Toce_0778 Toce_0778 Toce_0778 768139 768643 - pseudogene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0778 Toce_0779 Toce_0779 Toce_0779 768726 769685 + 3D domain protein COGs: COG3583 conserved hypothetical protein~InterPro IPR011098:IPR007137:IPR010611~KEGG: mta:Moth_0051 hypothetical protein~PFAM: 3D domain protein%3B G5 domain protein%3B protein of unknown function DUF348~SPTR: Putative uncharacterized protein%3B~PFAM: 3D domain%3B Domain of unknown function (DUF348)%3B G5 domain gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0779 Toce_0780 Toce_0780 Toce_0780 769722 770954 - Serine-type D-Ala-D-Ala carboxypeptidase COGs: COG1686 D-alanyl-D-alanine carboxypeptidase~InterPro IPR018044:IPR001967:IPR012907~KEGG: pth:PTH_1876 D-alanyl-D-alanine carboxypeptidase~PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1%3B Penicillin-binding protein 5 domain protein~PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase~SPTR: D-alanyl-D-alanine carboxypeptidase%3B~PFAM: D-alanyl-D-alanine carboxypeptidase%3B Penicillin-binding protein 5%2C C-terminal domain gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0780 Toce_0781 Toce_0781 Toce_0781 771096 771512 + hypothetical protein KEGG: fgr:FG05208.1 hypothetical protein~SPTR: Putative uncharacterized protein gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0781 Toce_0782 Toce_0782 Toce_0782 771509 772450 + protein of unknown function DUF421 COGs: COG2323 membrane protein~InterPro IPR007353~KEGG: hmo:HM1_1754 duf421 protein~PFAM: protein of unknown function DUF421~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF421) gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0782 Toce_0783 Toce_0783 Toce_0783 772592 774067 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0783 Toce_0784 Toce_0784 Toce_0784 774244 774459 + pseudogene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0784 Toce_0785 Toce_0785 Toce_0785 774452 776503 + NAD-dependent formate dehydrogenase catalytic subunit COGs: COG3383 Uncharacterized anaerobic dehydrogenase~Contains selenocysteine~InterProIPR006478:IPR006655:IPR006963:IPR006656:IPR 006657~KEGG: nth:Nther_0100 formate dehydrogenase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~SPTR: Formate dehydrogenase%2C alpha subunit%3B~TIGRFAM: formate dehydrogenase%2C alpha subunit~manually curated~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain~TIGRFAM: formate dehydrogenase%2C alpha subunit%2C archaeal-type gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0785 Toce_0786 Toce_0786 Toce_0786 776490 777770 + hydrogenase%2C Fe-only COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterProIPR017896:IPR013352:IPR017900:IPR004108:IPR 003149~KEGG: sth:STH3293 iron hydrogenase~PFAM: hydrogenase large subunit domain protein%3B iron hydrogenase small subunit~PRIAM: Ferredoxin hydrogenase~SPTR: Iron hydrogenase%3B~TIGRFAM: hydrogenase%2C Fe-only~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B Iron hydrogenase small subunit~TIGRFAM: hydrogenases%2C Fe-only gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0786 Toce_0787 Toce_0787 Toce_0787 777791 778324 + conserved hypothetical protein KEGG: tte:TTE2425 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1393) gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0787 Toce_0788 Toce_0788 Toce_0788 778418 779110 - protein of unknown function DUF1638 KEGG: dhd:Dhaf_2572 protein of unknown function DUF1638~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1638) gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0788 Toce_0789 Toce_0789 Toce_0789 780016 780534 - pseudogene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0789 Toce_0790 Toce_0790 Toce_0790 781120 781758 + cobalamin B12-binding domain protein COGs: COG5012 cobalamin binding protein~InterPro IPR006158:IPR003759~KEGG: amt:Amet_2093 cobalamin B12-binding domain-containing protein~PFAM: cobalamin B12-binding domain protein%3B Methionine synthase B12-binding module cap domain protein~SPTR: Cobalamin B12-binding domain protein%3B~PFAM: B12 binding domain gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0790 Toce_0791 Toce_0791 Toce_0791 781759 783114 + conserved hypothetical protein KEGG: amt:Amet_2095 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0791 Toce_0792 Toce_0792 Toce_0792 783262 784491 + major facilitator superfamily MFS_1 COGs: COG2223 Nitrate/nitrite transporter~InterPro IPR011701~KEGG: mta:Moth_1315 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0792 Toce_0793 Toce_0793 Toce_0793 784666 785319 + cobalamin B12-binding domain protein COGs: COG5012 cobalamin binding protein~InterPro IPR006158:IPR003759~KEGG: amt:Amet_2097 cobalamin B12-binding domain-containing protein~PFAM: cobalamin B12-binding domain protein%3B Methionine synthase B12-binding module cap domain protein~SPTR: Cobalamin B12-binding domain protein%3B~PFAM: B12 binding domain gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0793 Toce_0794 Toce_0794 Toce_0794 785339 786085 + transcriptional regulator%2C GntR family COGs: COG2188 Transcriptional regulators~InterPro IPR000524:IPR011663~KEGG: dsy:DSY2716 hypothetical protein~PFAM: regulatory protein GntR HTH%3B UbiC transcription regulator-associated domain protein~SMART: regulatory protein GntR HTH~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B UTRA domain gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0794 Toce_0795 Toce_0795 Toce_0795 786108 787880 - ferredoxin COGs: COG3894 Uncharacterized metal-binding protein~InterPro IPR001041~KEGG: dhd:Dhaf_3310 ferredoxin~SPTR: Activating enzyme gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0795 Toce_0796 Toce_0796 Toce_0796 788345 789160 + dihydropteroate synthase DHPS COGs: COG1410 Methionine synthase I cobalamin-binding domain~InterPro IPR000489~KEGG: amt:Amet_2092 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase~PFAM: dihydropteroate synthase DHPS~SPTR: Dihydropteroate synthase%2C DHPS%3B~PFAM: Pterin binding enzyme gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0796 Toce_0797 Toce_0797 Toce_0797 789427 791187 - ferredoxin COGs: COG3894 Uncharacterized metal-binding protein~InterPro IPR001041~KEGG: fpl:Ferp_1748 ferredoxin~SPTR: Activating enzyme gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0797 Toce_0798 Toce_0798 Toce_0798 791641 792543 + amidohydrolase COGs: COG1228 Imidazolonepropionase and related amidohydrolase~InterPro IPR006680~KEGG: amt:Amet_3889 amidohydrolase~PFAM: amidohydrolase~SPTR: Amidohydrolase%3B~PFAM: Amidohydrolase family gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0798 Toce_0799 Toce_0799 Toce_0799 792772 793188 + iron-sulfur cluster-binding protein CooF COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2~InterPro IPR017896:IPR017900~KEGG: chy:CHY_0086 iron-sulfur cluster-binding protein CooF~SPTR: 4Fe-4S ferredoxin%2C iron-sulfur binding domain protein gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0799 Toce_0800 Toce_0800 Toce_0800 793201 795087 + carbon-monoxide dehydrogenase%2C catalytic subunit COGs: COG1151 6Fe-6S prismane cluster-containing protein~InterPro IPR010047:IPR004137~KEGG: amt:Amet_2016 carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane~SPTR: Carbon-monoxide dehydrogenase%2C catalytic subunit%3B~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0800 Toce_0801 Toce_0801 Toce_0801 795103 795885 + cobyrinic acid a%2Cc-diamide synthase COGs: COG3640 CO dehydrogenase maturation factor~InterPro IPR014433~KEGG: amt:Amet_2017 cobyrinic acid a%2Cc-diamide synthase~SPTR: Cobyrinic acid ac-diamide synthase%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0801 Toce_0802 Toce_0802 Toce_0802 796072 797751 + Formate-tetrahydrofolate ligase COGs: COG2759 Formyltetrahydrofolate synthetase~InterPro IPR020628:IPR000559~KEGG: ckr:CKR_0385 hypothetical protein~PFAM: formate-tetrahydrofolate ligase FTHFS~PRIAM: Formate--tetrahydrofolate ligase~SPTR: Formate--tetrahydrofolate ligase%3B~PFAM: Formate--tetrahydrofolate ligase gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0802 Toce_0803 Toce_0803 Toce_0803 797802 798635 + Protein of unknown function DUF166 COGs: COG1810 conserved hypothetical protein~InterPro IPR003745~KEGG: mfs:MFS40622_1422 protein of unknown function DUF166~PFAM: Protein of unknown function DUF166~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized ArCR%2C COG1810 gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0803 Toce_0804 Toce_0804 Toce_0804 798626 799258 + Formimidoyltetrahydrofolate cyclodeaminase COGs: COG3404 Methenyl tetrahydrofolate cyclohydrolase~InterPro IPR007044~KEGG: cdf:CD0719 methenyltetrahydrofolate cyclohydrolase~PFAM: Formiminotransferase-cyclodeaminase~PRIAM: Glutamate formimidoyltransferase~SPTR: Methenyltetrahydrofolate cyclohydrolase%3B~PFAM: Formiminotransferase-cyclodeaminase gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0804 Toce_0805 Toce_0805 Toce_0805 799328 800188 + 5%2C10-methylenetetrahydrofolate dehydrogenase (NADP+) %3Bmethenyltetrahydrofolate cyclohydrolase COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase~InterPro IPR000672:IPR020630:IPR020631~KEGG: aoe:Clos_0249 methylenetetrahydrofolate dehydrogenase (NADP(+))~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain~PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+))~SPTR: Putative uncharacterized protein%3B~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0805 Toce_0806 Toce_0806 Toce_0806 800191 800853 + conserved hypothetical protein KEGG: cdl:CDR20291_0648 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Methylene-tetrahydrofolate reductase C terminal gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0806 Toce_0807 Toce_0807 Toce_0807 800855 801727 + methylenetetrahydrofolate reductase COGs: COG0685 5 10-methylenetetrahydrofolate reductase~InterPro IPR003171~KEGG: amt:Amet_2022 methylenetetrahydrofolate reductase~PFAM: methylenetetrahydrofolate reductase~SPTR: Methylenetetrahydrofolate reductase%3B~PFAM: Methylenetetrahydrofolate reductase gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0807 Toce_0808 Toce_0808 Toce_0808 801731 803155 + dihydrolipoamide dehydrogenase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterProIPR006258:IPR012999:IPR013027:IPR000815:IPR 004099~KEGG: amt:Amet_2023 dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: Dihydrolipoamide dehydrogenase%3B~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain~TIGRFAM: dihydrolipoamide dehydrogenase gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0808 Toce_0809 Toce_0809 Toce_0809 803169 803963 + cobyrinic acid a%2Cc-diamide synthase COGs: COG3640 CO dehydrogenase maturation factor~InterPro IPR014433~KEGG: amt:Amet_2024 cobyrinic acid a%2Cc-diamide synthase~SPTR: Cobyrinic acid a%2Cc-diamide synthase%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0809 Toce_0810 Toce_0810 Toce_0810 803989 804924 + CO dehydrogenase/acetyl-CoA synthase delta subunit%2C TIM barrel COGs: COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)~InterPro IPR016041~KEGG: amt:Amet_2025 acetyl-CoA decarbonylase/synthase complex subunit delta~PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit%2C TIM barrel~SPTR: CO dehydrogenase/acetyl-CoA synthase delta subunit%3B~PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0810 Toce_0811 Toce_0811 Toce_0811 804948 806309 + acetyl-CoA decarbonylase/synthase gamma subunit COGs: COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)~InterPro IPR016218:IPR007202:IPR016041~KEGG: amt:Amet_2026 acetyl-CoA decarbonylase/synthase complex subunit gamma~PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit%2C TIM barrel%3B Fe-S cluster domain protein~SPTR: CO dehydrogenase/acetyl-CoA synthase delta subunit%3B~PFAM: Putative Fe-S cluster%3B CO dehydrogenase/acetyl-CoA synthase delta subunit gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0811 Toce_0812 Toce_0812 Toce_0812 806328 807113 + dihydropteroate synthase DHPS COGs: COG1410 Methionine synthase I cobalamin-binding domain~InterPro IPR000489~KEGG: amt:Amet_2027 dihydropteroate synthase%2C DhpS~PFAM: dihydropteroate synthase DHPS~SPTR: Dihydropteroate synthase%2C DHPS%3B~PFAM: Pterin binding enzyme gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0812 Toce_0813 Toce_0813 Toce_0813 807140 809263 + CO dehydrogenase/acetyl-CoA synthase complex%2C beta subunit COGs: COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit~InterPro IPR004461~KEGG: cdl:CDR20291_0655 putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex%2C beta subunit~PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit~SPTR: Putative carbon monoxide dehydrogenase/acetyl-CoA synthase complex%2C beta subunit%3B~TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex%2C beta subunit~PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit~TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex%2C beta subunit gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0813 Toce_0814 Toce_0814 Toce_0814 809280 809657 + glycine cleavage system H protein COGs: COG0509 Glycine cleavage system H protein (lipoate-binding)~InterPro IPR017453:IPR003016:IPR002930~KEGG: aac:Aaci_1698 glycine cleavage system H protein~PFAM: glycine cleavage H-protein~SPTR: Glycine cleavage system H protein%3B~TIGRFAM: glycine cleavage system H protein~PFAM: Glycine cleavage H-protein~TIGRFAM: glycine cleavage system H protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0814 Toce_0815 Toce_0815 Toce_0815 809827 811773 + ferredoxin COGs: COG3894 Uncharacterized metal-binding protein~InterPro IPR001041~KEGG: amt:Amet_2030 ferredoxin~PFAM: ferredoxin~SPTR: Ferredoxin%3B~PFAM: 2Fe-2S iron-sulfur cluster binding domain gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0815 Toce_0816 Toce_0816 Toce_0816 811821 812006 + RNA-binding protein%2C predicted InterPro IPR019300~KEGG: amt:Amet_2034 hypothetical protein~PFAM: RNA-binding protein%2C predicted~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted RNA-binding protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0816 Toce_0817 Toce_0817 Toce_0817 812100 812288 - hypothetical protein KEGG: dae:Dtox_2368 hypothetical protein~SPTR: Putative uncharacterized protein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0817 Toce_0818 Toce_0818 Toce_0818 812301 812495 - conserved hypothetical protein KEGG: ate:Athe_0929 hypothetical protein~SPTR: Putative uncharacterized protein gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0818 Toce_0819 Toce_0819 Toce_0819 812643 812852 + regulatory protein%2C FmdB family InterPro IPR013429~KEGG: tro:trd_A0832 type I antifreeze protein~PFAM: Putative regulatory protein FmdB~SPTR: Type I antifreeze protein%3B~TIGRFAM: regulatory protein%2C FmdB family~PFAM: Zinc ribbon domain~TIGRFAM: putative regulatory protein%2C FmdB family gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0819 Toce_0820 Toce_0820 Toce_0820 812971 815232 + DEAD/DEAH box helicase domain protein COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster~InterProIPR014001:IPR001650:IPR014021:IPR000183:IPR 011545:IPR018973~KEGG: hor:Hore_14630 DEAD/DEAH box helicase domain protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B Protein of unknown function DUF1998~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: DEAD/DEAH box helicase domain protein%3B~PFAM: Helicase conserved C-terminal domain%3B Domain of unknown function (DUF1998)%3B DEAD/DEAH box helicase gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0820 Toce_0821 Toce_0821 Toce_0821 815229 816491 + conserved hypothetical protein COGs: COG3359 exonuclease~InterPro IPR013026~KEGG: sth:STH1622 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Tetratricopeptide repeat gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0821 Toce_0822 Toce_0822 Toce_0822 816818 818200 + glycyl-tRNA synthetase COGs: COG0423 Glycyl-tRNA synthetase (class II)~InterProIPR006195:IPR002315:IPR019825:IPR002314:IPR 004154~KEGG: tte:TTE0978 glycyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein~SPTR: Glycyl-tRNA synthetase%3B~TIGRFAM: glycyl-tRNA synthetase~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: glycyl-tRNA synthetase%2C dimeric type gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0822 Toce_0823 Toce_0823 Toce_0823 818256 818501 + hypothetical protein KEGG: rpt:Rpal_4650 putative ABC transporter (substrate-binding protein)%3B putative branched-chain amino acid transporter gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0823 Toce_0824 Toce_0824 Toce_0824 818714 820189 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0824 Toce_0825 Toce_0825 Toce_0825 820312 821670 - phosphomannomutase COGs: COG1109 Phosphomannomutase~InterProIPR016066:IPR005841:IPR005844:IPR005845:IPR 005846:IPR005843~KEGG: tte:TTE0731 phosphomannomutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase~SPTR: Phosphomannomutase%3B~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0825 Toce_0826 Toce_0826 Toce_0826 821691 822521 - protein of unknown function DUF155 COGs: COG1723 conserved hypothetical protein~InterPro IPR003734~KEGG: gur:Gura_1501 hypothetical protein~PFAM: protein of unknown function DUF155~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised ACR%2C YagE family COG1723 gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0826 Toce_0827 Toce_0827 Toce_0827 822600 822812 + pseudogene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0827 Toce_0828 Toce_0828 Toce_0828 823019 823657 + thiamine pyrophosphokinase COGs: COG1564 Thiamine pyrophosphokinase~InterPro IPR006282:IPR007371~KEGG: tte:TTE1497 thiamine pyrophosphokinase~PFAM: Thiamin pyrophosphokinase catalytic region~SPTR: Thiamine pyrophosphokinase%3B~TIGRFAM: thiamine pyrophosphokinase~PFAM: Thiamin pyrophosphokinase%2C vitamin B1 binding domain%3B Thiamin pyrophosphokinase%2C catalytic domain~TIGRFAM: thiamine pyrophosphokinase gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0828 Toce_0829 Toce_0829 Toce_0829 823715 825424 + PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR003593:IPR002078:IPR000700:IPR 020441:IPR013767:IPR002197~KEGG: hor:Hore_06720 sigma54 specific transcriptional regulator%2C fis family~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma54 specific transcriptional regulator%2C Fis family%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0829 Toce_0830 Toce_0830 Toce_0830 825577 826467 + Phosphate butyryltransferase COGs: COG0280 Phosphotransacetylase~InterPro IPR012147:IPR002505~KEGG: nth:Nther_1682 phosphate butyryltransferase~PFAM: phosphate acetyl/butaryl transferase~PRIAM: Phosphate butyryltransferase~SPTR: Phosphate butyryltransferase%3B~PFAM: Phosphate acetyl/butaryl transferase~TIGRFAM: phosphate butyryltransferase gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0830 Toce_0831 Toce_0831 Toce_0831 826549 827586 + leucine dehydrogenase COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase~InterPro IPR006095:IPR016211:IPR006097:IPR006096~KEGG: sth:STH1827 leucine dehydrogenase~PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region%3B Glu/Leu/Phe/Val dehydrogenase~SPTR: Leucine dehydrogenase%3B~PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%3B Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0831 Toce_0832 Toce_0832 Toce_0832 827734 828807 + butyrate kinase COGs: COG3426 Butyrate kinase~InterPro IPR011245:IPR000890~KEGG: aoe:Clos_2413 butyrate kinase~PFAM: acetate and butyrate kinase~SPTR: Butyrate kinase%3B~TIGRFAM: butyrate kinase~PFAM: Acetokinase family~TIGRFAM: butyrate kinase gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0832 Toce_0833 Toce_0833 Toce_0833 828837 829055 + 4Fe-4S ferredoxin iron-sulfur binding domain protein InterPro IPR017896:IPR017900~KEGG: tai:Taci_0588 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0833 Toce_0834 Toce_0834 Toce_0834 829057 830115 + pyruvate flavodoxin/ferredoxin oxidoreductase domain protein COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880:IPR005476~KEGG: tpd:Teth39_0465 2-ketoisovalerate ferredoxin reductase~PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B Transketolase domain protein~SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B~PFAM: domain%3B Transketolase%2C C-terminal domain gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0834 Toce_0835 Toce_0835 Toce_0835 830115 830864 + thiamine pyrophosphate protein domain protein TPP-binding protein COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766~KEGG: adg:Adeg_1384 thiamine pyrophosphate protein domain protein TPP-binding protein~PFAM: thiamine pyrophosphate protein domain protein TPP-binding~SPTR: Keto/oxoacid ferredoxin oxidoreductase%2C alpha subunit%3B~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0835 Toce_0836 Toce_0836 Toce_0836 830861 831400 + Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain protein COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: taf:THA_334 2-oxoglutarate oxidoreductase%2C gamma subunit~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~SPTR: 2-oxoglutarate oxidoreductase%2C gamma subunit%3B~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0836 Toce_0837 Toce_0837 Toce_0837 831415 831591 + hypothetical protein gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0837 Toce_0838 Toce_0838 Toce_0838 831594 832178 + Peptidoglycan-binding lysin domain protein InterPro IPR002482:IPR018392~KEGG: hor:Hore_02660 peptidoglycan-binding LysM~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM~SPTR: Peptidoglycan-binding LysM%3B~PFAM: LysM domain gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0838 Toce_0839 Toce_0839 Toce_0839 832349 833077 + Fe-S cluster domain protein InterPro IPR007202~KEGG: nth:Nther_0338 molybdopterin-guanine dinucleotide biosynthesis protein~PFAM: Fe-S cluster domain protein~SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein%3B~PFAM: Putative Fe-S cluster gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0839 Toce_0840 Toce_0840 Toce_0840 833080 833982 + Radical SAM domain protein COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein~InterPro IPR001989:IPR016431:IPR007197~KEGG: tpd:Teth39_0714 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0840 Toce_0841 Toce_0841 Toce_0841 834009 835124 + peptidase M29 aminopeptidase II COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T)~InterPro IPR000787~KEGG: cce:Ccel_3459 putative aminopeptidase~PFAM: peptidase M29 aminopeptidase II~SPTR: Putative aminopeptidase%3B~PFAM: Thermophilic metalloprotease (M29) gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0841 Toce_0842 Toce_0842 Toce_0842 835121 835342 - conserved hypothetical protein KEGG: gwc:GWCH70_3435 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3006) gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0842 Toce_0843 Toce_0843 Toce_0843 835355 836242 - beta-lactamase domain protein COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily)~KEGG: dae:Dtox_2072 beta-lactamase domain protein~SPTR: Beta-lactamase domain protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0843 Toce_0844 Toce_0844 Toce_0844 836561 836758 - protein of unknown function DUF1540 InterPro IPR011437~KEGG: cac:CAC0521 hypothetical protein~PFAM: protein of unknown function DUF1540~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of Unknown Function (DUF1540) gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0844 Toce_0845 Toce_0845 Toce_0845 836855 837781 + Hpr(Ser) kinase/phosphatase COGs: COG1493 Serine kinase of the HPr protein regulates carbohydrate metabolism~InterPro IPR003755:IPR011126:IPR011104~KEGG: tte:TTE1964 HPr kinase/phosphorylase~PFAM: HPr serine kinase domain protein~SPTR: HPr kinase%3B~TIGRFAM: HPr(Ser) kinase/phosphatase~PFAM: HPr Serine kinase N terminus%3B HPr Serine kinase C-terminal domain~TIGRFAM: Hpr(Ser) kinase/phosphatase gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0845 Toce_0846 Toce_0846 Toce_0846 837800 838855 + bifunctional phosphoglucose/phosphomannose isomerase COGs: COG0166 Glucose-6-phosphate isomerase~InterPro IPR011857:IPR001347:IPR019490~KEGG: ate:Athe_0619 bifunctional phosphoglucose/phosphomannose isomerase~PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase-like%3B sugar isomerase (SIS)~PRIAM: Mannose-6-phosphate isomerase~SPTR: Mannose-6-phosphate isomerase / glucose-6-phosphate isomerase%3B~TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase~PFAM: Bacterial phospho-glucose isomerase C-terminal region%3B SIS domain~TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0846 Toce_0847 Toce_0847 Toce_0847 838877 839626 + PHP domain protein COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family~InterPro IPR003141:IPR004013~KEGG: tte:TTE1963 putative hydrolase~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~SPTR: Putative PHP domain protein%3B~PFAM: PHP domain gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0847 Toce_0848 Toce_0848 Toce_0848 839644 840495 + D-amino acid aminotransferase COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR005784:IPR018300:IPR001544~KEGG: slg:SLGD_01180 D-alanine aminotransferase~PFAM: aminotransferase class IV~SPTR: D-alanine aminotransferase%3B~TIGRFAM: D-amino acid aminotransferase~PFAM: Aminotransferase class IV~TIGRFAM: branched-chain amino acid aminotransferase%2C group I%3B D-amino acid aminotransferase gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0848 Toce_0849 Toce_0849 Toce_0849 840570 841967 + extracellular solute-binding protein family 1 COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: aoe:Clos_0572 extracellular solute-binding protein~PFAM: extracellular solute-binding protein family 1~SPTR: Extracellular solute-binding protein family 1%3B~PFAM: Bacterial extracellular solute-binding protein gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0849 Toce_0850 Toce_0850 Toce_0850 841973 842212 + hypothetical protein KEGG: cce:Ccel_2872 hypothetical protein~SPTR: Putative uncharacterized protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0850 Toce_0851 Toce_0851 Toce_0851 842402 843316 + UDP-N-acetylmuramate dehydrogenase COGs: COG0812 UDP-N-acetylmuramate dehydrogenase~InterPro IPR016166:IPR003170:IPR006094:IPR011601~KEGG: tit:Thit_1648 UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein%3B FAD linked oxidase domain protein~PRIAM: UDP-N-acetylmuramate dehydrogenase~SPTR: UDP-N-acetylmuramate dehydrogenase%3B~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: FAD binding domain%3B UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal domain~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0851 Toce_0852 Toce_0852 Toce_0852 843329 845017 + Hydantoinase/oxoprolinase COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit~InterPro IPR008040:IPR002821~KEGG: tte:TTE1121 N-methylhydaintoinase A~PFAM: Hydantoinase/oxoprolinase%3B Hydantoinaseoxoprolinase domain protein~SPTR: N-methylhydaintoinase A%3B~PFAM: Hydantoinase/oxoprolinase%3B Hydantoinase/oxoprolinase N-terminal region gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0852 Toce_0853 Toce_0853 Toce_0853 844998 846311 + histone deacetylase superfamily COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein~InterPro IPR000286~KEGG: tte:TTE1122 deacetylase~PFAM: histone deacetylase superfamily~SPTR: Deacetylases%2C including yeast histone deacetylase and acetoin utilization protein%3B~PFAM: Histone deacetylase domain gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0853 Toce_0854 Toce_0854 Toce_0854 846410 846997 + hypothetical protein KEGG: tet:TTHERM_00006350 hypothetical protein~SPTR: Putative uncharacterized protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0854 Toce_0855 Toce_0855 Toce_0855 847073 847573 + conserved hypothetical protein KEGG: amt:Amet_4434 hypothetical protein~SPTR: Putative uncharacterized protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0855 Toce_0856 Toce_0856 Toce_0856 847745 847849 + hypothetical protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0856 Toce_0857 Toce_0857 Toce_0857 847862 849220 + magnesium transporter COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)~InterPro IPR000644:IPR006669:IPR006668:IPR006667~KEGG: sth:STH539 magnesium transporter~PFAM: MgtE integral membrane region%3B MgtE intracellular region%3B CBS domain containing protein~SMART: CBS domain containing protein~SPTR: Magnesium transporter%3B~TIGRFAM: magnesium transporter~PFAM: MgtE intracellular N domain%3B Divalent cation transporter%3B CBS domain~TIGRFAM: Mg2+ transporter (mgtE) gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0857 Toce_0858 Toce_0858 Toce_0858 849234 850577 + magnesium transporter COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain)~InterPro IPR000644:IPR006669:IPR006668:IPR006667~KEGG: hor:Hore_12500 magnesium transporter~PFAM: MgtE integral membrane region%3B MgtE intracellular region%3B CBS domain containing protein~SMART: CBS domain containing protein~SPTR: Magnesium transporter%3B~TIGRFAM: magnesium transporter~PFAM: MgtE intracellular N domain%3B CBS domain%3B Divalent cation transporter~TIGRFAM: Mg2+ transporter (mgtE) gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0858 Toce_0859 Toce_0859 Toce_0859 850619 851791 - SAM-dependent methyltransferase COGs: COG1092 SAM-dependent methyltransferase~InterPro IPR002478:IPR002905~KEGG: cpi:Cpin_6903 putative RNA methylase~PFAM: N2N2-dimethylguanosine tRNA methyltransferase%3B PUA domain containing protein~SMART: PUA domain containing protein~SPTR: Putative uncharacterized protein%3B~PFAM: PUA domain%3B S-adenosylmethionine-dependent methyltransferase gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0859 Toce_0860 Toce_0860 Toce_0860 851799 852134 - conserved hypothetical protein KEGG: sth:STH1710 hypothetical protein~SPTR: UPF0342 protein STH1710%3B~PFAM: Protein of unknown function (DUF964) gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0860 Toce_0861 Toce_0861 Toce_0861 852131 852847 - Haloacid dehalogenase domain protein hydrolase COGs: COG1011 hydrolase (HAD superfamily)~InterPro IPR005834~KEGG: dau:Daud_0172 hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: Haloacid dehalogenase domain protein hydrolase%3B~PFAM: haloacid dehalogenase-like hydrolase gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0861 Toce_0862 Toce_0862 Toce_0862 852994 853764 + histidinol phosphate phosphatase HisJ family COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family~InterPro IPR003141:IPR010140:IPR004013~KEGG: tte:TTE1835 PHP family histidinol phosphatase/hydrolase~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~SPTR: Histidinol phosphatase and related hydrolases of the PHP family%3B~TIGRFAM: histidinol phosphate phosphatase HisJ family~PFAM: PHP domain~TIGRFAM: histidinol phosphate phosphatase HisJ family gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0862 Toce_0863 Toce_0863 Toce_0863 853740 854630 + conserved hypothetical protein COGs: COG1660 P-loop-containing kinase~InterPro IPR005337~KEGG: tte:TTE1834 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: P-loop ATPase family protein%3B~PFAM: P-loop ATPase protein family gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0863 Toce_0864 Toce_0864 Toce_0864 854620 855558 + protein of unknown function UPF0052 and CofD COGs: COG0391 conserved hypothetical protein~InterPro IPR010119:IPR002882~KEGG: hor:Hore_15870 conserved hypothetical protein%2C CofD-related TIGR01826~PFAM: protein of unknown function UPF0052 and CofD~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family UPF0052~TIGRFAM: conserved hypothetical protein%2C cofD-related gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0864 Toce_0865 Toce_0865 Toce_0865 855595 856563 + protein of unknown function DUF199 COGs: COG1481 conserved hypothetical protein~InterPro IPR003802:IPR018478~KEGG: aoe:Clos_0578 hypothetical protein~PFAM: protein of unknown function DUF199%3B Sporulation regulator WhiA-like~SPTR: Putative sporulation transcription regulator whiA%3B~PFAM: Sporulation Regulator WhiA N terminal%3B Sporulation Regulator WhiA C terminal domain~TIGRFAM: conserved hypothetical protein gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0865 Toce_0866 Toce_0866 Toce_0866 856556 856822 + Phosphotransferase system%2C phosphocarrier protein HPr COGs: COG1925 Phosphotransferase system HPr-related protein~InterPro IPR000032:IPR005698:IPR001020:IPR002114~KEGG: tte:TTE1820 phosphotransferase system%2C HPr-related proteins~PFAM: phosphoryl transfer system HPr~SPTR: Phosphotransferase system%2C HPr-related proteins%3B~TIGRFAM: phosphocarrier%2C HPr family~PFAM: PTS HPr component phosphorylation site~TIGRFAM: Phosphotransferase System HPr (HPr) Family gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0866 Toce_0867 Toce_0867 Toce_0867 856871 858169 + putative signal transduction protein with CBS and DRTGG domains COGs: COG4109 transcriptional regulator protein containing CBS domains~InterPro IPR000644:IPR010766~KEGG: gwc:GWCH70_2695 putative signal transduction protein with CBS and DRTGG domains~PFAM: DRTGG domain protein%3B CBS domain containing protein~SMART: CBS domain containing protein~SPTR: Putative signal transduction protein with CBS and DRTGG domains%3B~PFAM: DRTGG domain%3B CBS domain%3B Bacterial regulatory proteins%2C gntR family gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0867 Toce_0868 Toce_0868 Toce_0868 858179 861616 + DNA polymerase III catalytic subunit%2C DnaE type COGs: COG0587 DNA polymerase III alpha subunit~InterProIPR003141:IPR004805:IPR004013:IPR011708:IPR 004365~KEGG: tte:TTE1818 DNA polymerase III DnaE~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~PRIAM: DNA-directed DNA polymerase~SMART: phosphoesterase PHP domain protein~SPTR: DNA polymerase III%2C alpha subunit%3B~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: Bacterial DNA polymerase III alpha subunit%3B PHP domain%3B OB-fold nucleic acid binding domain~TIGRFAM: DNA-directed DNA polymerase III (polc) gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0868 Toce_0869 Toce_0869 Toce_0869 861656 861850 + conserved hypothetical protein KEGG: tit:Thit_1631 hypothetical protein~SPTR: Putative uncharacterized protein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0869 Toce_0870 Toce_0870 Toce_0870 861865 862824 + 6-phosphofructokinase COGs: COG0205 6-phosphofructokinase~InterPro IPR012828:IPR015912:IPR000023:IPR012003~KEGG: drm:Dred_2313 6-phosphofructokinase~PFAM: phosphofructokinase~SPTR: 6-phosphofructokinase%3B~TIGRFAM: 6-phosphofructokinase~PFAM: Phosphofructokinase~TIGRFAM: 6-phosphofructokinase gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0870 Toce_0871 Toce_0871 Toce_0871 862837 864591 + pyruvate kinase COGs: COG0469 Pyruvate kinase~InterProIPR001697:IPR018209:IPR015793:IPR015794:IPR 008279~KEGG: tte:TTE1815 pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta%3B PEP-utilising protein mobile region~SPTR: Pyruvate kinase%3B~TIGRFAM: pyruvate kinase~PFAM: Pyruvate kinase%2C barrel domain%3B PEP-utilising enzyme%2C mobile domain%3B Pyruvate kinase%2C alpha/beta domain~TIGRFAM: pyruvate kinase gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0871 Toce_0872 Toce_0872 Toce_0872 864780 865928 - Integrase catalytic region InterPro IPR001584~KEGG: adg:Adeg_0482 integrase catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0872 Toce_0873 Toce_0873 Toce_0873 866588 867472 + branched chain amino acid aminotransferase apoenzyme COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase~InterPro IPR005785:IPR018300:IPR001544~KEGG: chy:CHY_0515 branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV~PRIAM: Branched-chain-amino-acid transaminase~SPTR: Branched-chain amino acid aminotransferase%3B~TIGRFAM: branched-chain amino acid aminotransferase~PFAM: Aminotransferase class IV~TIGRFAM: D-amino acid aminotransferase%3B branched-chain amino acid aminotransferase%2C group I gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0873 Toce_0874 Toce_0874 Toce_0874 867593 868141 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR014284:IPR000792:IPR007627:IPR013249~KEGG: tit:Thit_2063 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~SPTR: RNA polymerase%2C sigma-24 subunit%2C ECF subfamily%3B~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0874 Toce_0875 Toce_0875 Toce_0875 868145 869251 + conserved hypothetical protein KEGG: tte:TTE2401 hypothetical protein~SPTR: Putative transmembrane anti-sigma factor%3B~PFAM: Predicted integral membrane protein (DUF2275) gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0875 Toce_0876 Toce_0876 Toce_0876 869256 870182 + ABC transporter related protein COGs: COG1131 ABC-type multidrug transport system ATPase component~InterPro IPR003593:IPR003439:IPR017871~KEGG: tit:Thit_2065 ABC transporter related protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0876 Toce_0877 Toce_0877 Toce_0877 870154 870996 + conserved hypothetical protein KEGG: tpd:Teth39_0292 hypothetical protein~SPTR: Putative uncharacterized protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0877 Toce_0878 Toce_0878 Toce_0878 871110 872420 + ErfK/YbiS/YcfS/YnhG family protein COGs: COG1376 conserved hypothetical protein~InterPro IPR005490~KEGG: cbi:CLJ_B0018 ErfK/YbiS/YcfS/YnhG family protein~PFAM: ErfK/YbiS/YcfS/YnhG family protein~SPTR: ErfK/YbiS/YcfS/YnhG family protein%3B~PFAM: L%2CD-transpeptidase catalytic domain gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0878 Toce_0879 Toce_0879 Toce_0879 872447 873040 + nucleoside recognition domain protein COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis.~InterPro IPR011642~KEGG: cpo:COPRO5265_1366 spore maturation protein A~PFAM: nucleoside recognition domain protein~SPTR: Spore maturation protein A%3B~PFAM: Nucleoside recognition gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0879 Toce_0880 Toce_0880 Toce_0880 873046 873576 + nucleoside recognition domain protein COGs: COG0700 membrane protein~InterPro IPR011642~KEGG: cpo:COPRO5265_1365 spore maturation protein B~PFAM: nucleoside recognition domain protein~SPTR: Spore maturation protein B gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0880 Toce_0881 Toce_0881 Toce_0881 873664 876303 + ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC COGs: COG0474 Cation transport ATPase~InterProIPR001757:IPR018303:IPR006069:IPR004014:IPR 008250:IPR005834:IPR006068~KEGG: cpo:COPRO5265_1364 cation-transporting ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Cation-transporting ATPase%3B~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B Cation transporting ATPase%2C C-terminus%3B Cation transporter/ATPase%2C N-terminus%3B haloacid dehalogenase-like hydrolase~TIGRFAM: plasma-membrane calcium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B potassium and/or sodium efflux P-type ATPase%2C fungal-type gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0881 Toce_0882 Toce_0882 Toce_0882 876394 876702 + conserved hypothetical protein KEGG: cpo:COPRO5265_1363 hypothetical protein~SPTR: Putative uncharacterized protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0882 Toce_0883 Toce_0883 Toce_0883 876722 877198 + Appr-1-p processing domain protein COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1~InterPro IPR002589~KEGG: cpo:COPRO5265_1362 Appr-1-p processing enzyme family protein~PFAM: Appr-1-p processing domain protein~SMART: Appr-1-p processing domain protein~SPTR: Appr-1-p processing enzyme family protein%3B~PFAM: Macro domain gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0883 Toce_0884 Toce_0884 Toce_0884 877310 877516 + hypothetical protein KEGG: tca:660533 similar to CG1915-PC%2C isoform C~SPTR: Predicted protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0884 Toce_0885 Toce_0885 Toce_0885 877536 877826 + conserved hypothetical protein KEGG: amt:Amet_3059 hypothetical protein~SPTR: Putative uncharacterized protein gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0885 Toce_0886 Toce_0886 Toce_0886 877966 878406 + OsmC family protein COGs: COG1765 redox protein regulator of disulfide bond formation~InterPro IPR003718~KEGG: cpo:COPRO5265_1361 conserved protein with OsmC domain~PFAM: OsmC family protein~SPTR: Conserved protein with OsmC domain%3B~PFAM: OsmC-like protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0886 Toce_0887 Toce_0887 Toce_0887 878533 879516 + biotin/acetyl-CoA-carboxylase ligase COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase~InterPro IPR004408:IPR004143:IPR003142~KEGG: cpo:COPRO5265_1359 biotin-[acetyl-CoA-carboxylase] ligase~PFAM: biotin/lipoate A/B protein ligase%3B biotin protein ligase domain protein~PRIAM: Biotin--[acetyl-CoA-carboxylase] ligase~SPTR: Biotin-[acetyl-CoA-carboxylase] ligase%3B~TIGRFAM: biotin/acetyl-CoA-carboxylase ligase~PFAM: HTH domain%3B Biotin protein ligase C terminal domain%3B Biotin/lipoate A/B protein ligase family~TIGRFAM: BirA biotin operon repressor domain%3B birA%2C biotin-[acetyl-CoA-carboxylase] ligase region gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0887 Toce_0888 Toce_0888 Toce_0888 879561 879764 + conserved hypothetical protein KEGG: abi:Aboo_0170 hypothetical protein~SPTR: Putative uncharacterized protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0888 Toce_0889 Toce_0889 Toce_0889 879883 880638 + dihydrodipicolinate reductase COGs: COG0289 Dihydrodipicolinate reductase~InterPro IPR011770:IPR000846~KEGG: cth:Cthe_0963 dihydrodipicolinate reductase~PFAM: dihydrodipicolinate reductase~PRIAM: Dihydrodipicolinate reductase~SPTR: Dihydrodipicolinate reductase%3B~TIGRFAM: dihydrodipicolinate reductase~PFAM: Dihydrodipicolinate reductase%2C N-terminus%3B Dihydrodipicolinate reductase%2C C-terminus~TIGRFAM: dihydrodipicolinate reductase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0889 Toce_0890 Toce_0890 Toce_0890 880635 880997 - conserved hypothetical protein KEGG: cbb:CLD_1205 hypothetical protein~SPTR: Putative uncharacterized protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0890 Toce_0891 Toce_0891 Toce_0891 881102 881638 - conserved hypothetical protein KEGG: dau:Daud_0054 hypothetical protein~SPTR: Putative uncharacterized protein gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0891 Toce_0892 Toce_0892 Toce_0892 881940 882653 + DNA alkylation repair enzyme COGs: COG4912 DNA alkylation repair protein~InterPro IPR014825~KEGG: hor:Hore_01880 DNA alkylation repair enzyme~PFAM: DNA alkylation repair enzyme~SPTR: DNA alkylation repair enzyme%3B~PFAM: DNA alkylation repair enzyme gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0892 Toce_0893 Toce_0893 Toce_0893 882691 883485 + Xylose isomerase domain protein TIM barrel COGs: COG1082 Sugar phosphate isomerase/epimerase~InterPro IPR012307~KEGG: ctc:CTC00572 hypothetical protein~PFAM: Xylose isomerase domain protein TIM barrel~SPTR: Conserved protein%3B~PFAM: Xylose isomerase-like TIM barrel gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0893 Toce_0894 Toce_0894 Toce_0894 883567 884055 + ADP-ribosylation/Crystallin J1 COGs: COG1397 ADP-ribosylglycohydrolase~InterPro IPR005502~KEGG: sti:Sthe_0600 ADP-ribosylation/crystallin J1~PFAM: ADP-ribosylation/Crystallin J1~SPTR: ADP-ribosylation/Crystallin J1%3B~manually curated~PFAM: ADP-ribosylglycohydrolase gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0894 Toce_0895 Toce_0895 Toce_0895 884240 886558 + DNA internalization-related competence protein ComEC/Rec2 COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily)~InterPro IPR004797:IPR004477~KEGG: tit:Thit_0878 DNA internalization-related competence protein ComEC/Rec2~PFAM: ComEC/Rec2-related protein~SPTR: DNA internalization-related competence protein ComEC/Rec2%3B~TIGRFAM: DNA internalization-related competence protein ComEC/Rec2%3B ComEC/Rec2-related protein~PFAM: Competence protein%3B Metallo-beta-lactamase superfamily~TIGRFAM: ComEC/Rec2-related protein%3B DNA internalization-related competence protein ComEC/Rec2 gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0895 Toce_0896 Toce_0896 Toce_0896 886646 887656 + DNA polymerase III%2C delta subunit COGs: COG1466 DNA polymerase III delta subunit~InterPro IPR005790:IPR010372~KEGG: amt:Amet_3057 DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III delta~SPTR: DNA polymerase III%2C delta subunit%3B~TIGRFAM: DNA polymerase III%2C delta subunit~PFAM: DNA polymerase III%2C delta subunit~TIGRFAM: DNA polymerase III%2C delta subunit gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0896 Toce_0897 Toce_0897 Toce_0897 887678 888361 - hypothetical protein KEGG: dae:Dtox_3571 hypothetical protein~SPTR: Putative uncharacterized protein gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0897 Toce_0898 Toce_0898 Toce_0898 888472 888744 - SSU ribosomal protein S20P InterPro IPR002583~KEGG: tte:TTE0943 30S ribosomal protein S20~PFAM: ribosomal protein S20~SPTR: 30S ribosomal protein S20%3B~TIGRFAM: ribosomal protein S20~PFAM: Ribosomal protein S20~TIGRFAM: ribosomal protein S20 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0898 Toce_0899 Toce_0899 Toce_0899 888867 889193 + membrane protein of unknown function InterPro IPR007165~KEGG: mta:Moth_0580 hypothetical protein~PFAM: membrane protein of unknown function~SPTR: Putative uncharacterized protein%3B~PFAM: Membrane protein of unknown function gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0899 Toce_0900 Toce_0900 Toce_0900 889245 890174 + spore protease InterPro IPR005080~KEGG: cth:Cthe_1038 germination protease~PFAM: peptidase M63 germination protease~PRIAM: GPR endopeptidase~SPTR: Spore protease%3B~TIGRFAM: spore protease~PFAM: Germination protease~TIGRFAM: GPR endopeptidase gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0900 Toce_0901 Toce_0901 Toce_0901 890237 891385 + stage II sporulation protein P InterPro IPR010897~KEGG: mta:Moth_0578 hypothetical protein~PFAM: Stage II sporulation P family protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: stage II sporulation protein P~PFAM: Stage II sporulation protein P (SpoIIP)~TIGRFAM: stage II sporulation protein P gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0901 Toce_0902 Toce_0902 Toce_0902 891463 891831 + hypothetical protein KEGG: mhp:MHP7448_0277 hypothetical protein~SPTR: Putative uncharacterized protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0902 Toce_0903 Toce_0903 Toce_0903 891873 893675 + GTP-binding protein LepA COGs: COG0481 Membrane GTPase LepA~InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842~KEGG: tte:TTE0951 GTP-binding protein LepA~PFAM: GTP-binding protein LepA domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain protein~SPTR: GTP-binding protein LepA%3B~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B GTP-binding protein LepA C-terminus~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein domain gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0903 Toce_0904 Toce_0904 Toce_0904 893681 894805 + oxygen-independent coproporphyrinogen III oxidase COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase~InterPro IPR006638:IPR004559:IPR007197:IPR010723~KEGG: cth:Cthe_1325 coproporphyrinogen III oxidase%2C anaerobic~PFAM: HemN domain protein%3B Radical SAM domain protein~PRIAM: Coproporphyrinogen dehydrogenase~SMART: Elongator protein 3/MiaB/NifB~SPTR: Coproporphyrinogen III oxidase%2C anaerobic%3B~TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM superfamily%3B HemN C-terminal region~TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0904 Toce_0905 Toce_0905 Toce_0905 894816 895691 + pseudouridine synthase%2C RluA family COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR002942:IPR006225:IPR006224:IPR006145~KEGG: tpd:Teth39_0713 RluA family pseudouridine synthase~PFAM: pseudouridine synthase~SPTR: Pseudouridine synthase%3B~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: RNA pseudouridylate synthase~TIGRFAM: pseudouridine synthase%2C RluA family gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0905 Toce_0906 Toce_0906 Toce_0906 895777 896808 + heat-inducible transcription repressor HrcA COGs: COG1420 Transcriptional regulator of heat shock gene~InterPro IPR002571:IPR021153~KEGG: sth:STH502 heat-inducible transcriptional repressor~PFAM: Winged helix-turn-helix transcription repressor%2C HrcA-like~SPTR: Heat-inducible transcription repressor hrcA%3B~TIGRFAM: heat-inducible transcription repressor HrcA~PFAM: HrcA protein C terminal domain~TIGRFAM: heat shock gene repressor HrcA gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0906 Toce_0907 Toce_0907 Toce_0907 896826 898412 + chaperonin Cpn60/TCP-1 COGs: COG0459 Chaperonin GroEL (HSP60 family)~InterPro IPR002194:IPR017998:IPR002423~KEGG: pth:PTH_0876 chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~SPTR: Chaperonin Cpn60/TCP-1%3B~PFAM: TCP-1/cpn60 chaperonin family gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0907 Toce_0908 Toce_0908 Toce_0908 898428 898997 + GrpE protein COGs: COG0576 Molecular chaperone GrpE (heat shock protein)~InterPro IPR000740~KEGG: tex:Teth514_2080 GrpE protein~PFAM: GrpE protein~SPTR: Protein grpE%3B~PFAM: GrpE gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0908 Toce_0909 Toce_0909 Toce_0909 899013 900869 + chaperone protein DnaK COGs: COG0443 Molecular chaperone~InterPro IPR012725:IPR018181:IPR001023:IPR013126~KEGG: tpd:Teth39_1393 molecular chaperone DnaK~PFAM: Heat shock protein 70~PRIAM: Adenosinetriphosphatase~SPTR: Chaperone protein DnaK%3B~TIGRFAM: chaperone protein DnaK~PFAM: Hsp70 protein~TIGRFAM: chaperone protein DnaK gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0909 Toce_0910 Toce_0910 Toce_0910 900915 902063 + chaperone protein DnaJ COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain~InterProIPR001623:IPR001305:IPR012724:IPR018253:IPR 003095:IPR002939~KEGG: pth:PTH_0879 DnaJ-class molecular chaperone~PFAM: chaperone DnaJ domain protein%3B heat shock protein DnaJ domain protein%3B DnaJ central domain protein~SMART: heat shock protein DnaJ domain protein~SPTR: Chaperone protein dnaJ%3B~TIGRFAM: chaperone protein DnaJ~PFAM: DnaJ C terminal region%3B DnaJ central domain (4 repeats)%3B DnaJ domain~TIGRFAM: chaperone protein DnaJ gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0910 Toce_0911 Toce_0911 Toce_0911 902081 903025 + (LSU ribosomal protein L11P)-lysine N-methyltransferase COGs: COG2264 Ribosomal protein L11 methylase~InterPro IPR004498:IPR010456~KEGG: aoe:Clos_1235 ribosomal protein L11 methyltransferase~PFAM: ribosomal L11 methyltransferase~SPTR: Ribosomal protein L11 methyltransferase%3B~TIGRFAM: ribosomal protein L11 methyltransferase~PFAM: Ribosomal protein L11 methyltransferase (PrmA)~TIGRFAM: ribosomal protein L11 methyltransferase gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0911 Toce_0912 Toce_0912 Toce_0912 903038 903808 + protein of unknown function DUF558 COGs: COG1385 conserved hypothetical protein~InterPro IPR006700~KEGG: cth:Cthe_1319 hypothetical protein~PFAM: protein of unknown function DUF558~SPTR: Putative uncharacterized protein%3B~PFAM: RNA methyltransferase~TIGRFAM: RNA methyltransferase%2C RsmE family gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0912 Toce_0913 Toce_0913 Toce_0913 903783 905108 + RNA modification enzyme%2C MiaB family COGs: COG0621 2-methylthioadenine synthetase~InterProIPR006638:IPR002792:IPR013848:IPR005839:IPR 006467:IPR020612:IPR007197~KEGG: tte:TTE0962 2-methylthioadenine synthetase~PFAM: Protein of unknown function UPF0004 %3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: 2-methylthioadenine synthetase%3B~TIGRFAM: RNA modification enzyme%2C MiaB family%3B MiaB-like tRNA modifying enzyme~PFAM: Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: MiaB-like tRNA modifying enzyme%3B RNA modification enzyme%2C MiaB family gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0913 Toce_0914 Toce_0914 Toce_0914 905197 905538 + histidine triad (HIT) protein COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase~InterPro IPR001310:IPR000568:IPR019808~KEGG: tpd:Teth39_1375 histidine triad (HIT) protein~PFAM: histidine triad (HIT) protein~SPTR: Histidine triad (HIT) protein%3B~PFAM: HIT domain gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0914 Toce_0915 Toce_0915 Toce_0915 905608 905784 + SSU ribosomal protein S21P InterPro IPR001911:IPR018278~KEGG: tit:Thit_0914 ribosomal protein S21~PFAM: ribosomal protein S21~SPTR: 30S ribosomal protein S21%3B~TIGRFAM: ribosomal protein S21~PFAM: Ribosomal protein S21~TIGRFAM: ribosomal protein S21 gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0915 Toce_0916 Toce_0916 Toce_0916 905808 906251 + hypothetical protein COGs: COG1610 conserved hypothetical protein~InterPro IPR019004~KEGG: hor:Hore_12740 GatB/YqeY domain protein~PFAM: Protein of unknown function~SPTR: GatB/Yqey domain protein%3B~PFAM: Yqey-like protein gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0916 Toce_0917 Toce_0917 Toce_0917 906364 906645 + sporulation protein YqfC KEGG: dae:Dtox_3072 sporulation protein YqfC~SPTR: Sporulation protein YqfC%3B~PFAM: YabP family~TIGRFAM: sporulation protein YqfC gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0917 Toce_0918 Toce_0918 Toce_0918 906662 907852 + sporulation protein YqfD InterPro IPR010690~KEGG: tte:TTE0969 stage IV sporulation protein~PFAM: putative stage IV sporulation YqfD~SPTR: Stage IV sporulation protein%3B~TIGRFAM: sporulation protein YqfD~PFAM: Putative stage IV sporulation protein YqfD~TIGRFAM: sporulation protein YqfD gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0918 Toce_0919 Toce_0919 Toce_0919 907871 908848 + PhoH family protein COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase~InterPro IPR004087:IPR018111:IPR003714~KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH%2C ATPase~PFAM: PhoH family protein%3B K Homology%2C type 1%2C subgroup~SMART: KH domain protein~SPTR: PhoH family protein%3B~PFAM: KH domain%3B PhoH-like protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0919 Toce_0920 Toce_0920 Toce_0920 908861 910951 + 7TM receptor with intracellular metal dependent phosphohydrolase COGs: COG1480 membrane-associated HD superfamily hydrolase~InterPro IPR003607:IPR006675:IPR011621:IPR006674~KEGG: dau:Daud_2047 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase 7TM intracellular region%3B metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: 7TM receptor with intracellular metal dependent phosphohydrolase%3B~TIGRFAM: metal dependent phophohydrolase~PFAM: 7TM-HD extracellular%3B HD domain%3B 7TM receptor with intracellular HD hydrolase~TIGRFAM: uncharacterized domain HDIG gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0920 Toce_0921 Toce_0921 Toce_0921 910954 911442 + protein of unknown function UPF0054 COGs: COG0319 metal-dependent hydrolase~InterPro IPR002036:IPR020549~KEGG: pth:PTH_0892 putative metalloprotease~PFAM: protein of unknown function UPF0054~SPTR: Putative metalloprotease PTH_0892%3B~PFAM: Uncharacterized protein family UPF0054~TIGRFAM: conserved hypothetical protein TIGR00043 gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0921 Toce_0922 Toce_0922 Toce_0922 911439 911834 + diacylglycerol kinase COGs: COG0818 Diacylglycerol kinase~InterPro IPR000829~KEGG: tpd:Teth39_1366 diacylglycerol kinase~PFAM: diacylglycerol kinase~SPTR: Diacylglycerol kinase%3B~PFAM: Prokaryotic diacylglycerol kinase gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0922 Toce_0923 Toce_0923 Toce_0923 911869 912909 + conserved hypothetical protein KEGG: amt:Amet_3028 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3048) gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0923 Toce_0924 Toce_0924 Toce_0924 912955 913710 + DNA repair protein RecO COGs: COG1381 Recombinational DNA repair protein (RecF pathway)~InterPro IPR003717~KEGG: aoe:Clos_1253 DNA repair protein RecO~PFAM: Recombination protein O RecO~SPTR: DNA repair protein recO%3B~TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O C terminal%3B Recombination protein O N terminal~TIGRFAM: DNA repair protein RecO gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0924 Toce_0925 Toce_0925 Toce_0925 913724 914320 + protein of unknown function DUF95 transmembrane COGs: COG1300 membrane protein~InterPro IPR002798~KEGG: tsi:TSIB_1923 SpoIIM-like stage II sporulation protein M related~PFAM: protein of unknown function DUF95 transmembrane~SPTR: Putative uncharacterized protein%3B~PFAM: Integral membrane protein DUF95 gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0925 Toce_0926 Toce_0926 Toce_0926 914442 915053 + CBS domain containing protein InterPro IPR000644:IPR016842~KEGG: tpd:Teth39_1360 transcriptional regulator~PFAM: CBS domain containing protein~SMART: CBS domain containing protein~SPTR: Transcriptional regulator with CBS sensor domain%2C DeoR family%3B~PFAM: HTH domain%3B CBS domain gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0926 Toce_0927 Toce_0927 Toce_0927 915068 915889 + protein of unknown function DUF299 COGs: COG1806 conserved hypothetical protein~InterPro IPR005177~KEGG: drm:Dred_2470 hypothetical protein~PFAM: protein of unknown function DUF299~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Domain of unknown function (DUF299) gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0927 Toce_0928 Toce_0928 Toce_0928 915889 918534 + pyruvate phosphate dikinase COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase~InterProIPR010121:IPR018274:IPR000121:IPR002192:IPR 008279~KEGG: mta:Moth_0607 pyruvate phosphate dikinase~PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding%3B PEP-utilising protein mobile region%3B PEP-utilizing protein~PRIAM: Pyruvate%2C phosphate dikinase~SPTR: Pyruvate phosphate dikinase%3B~TIGRFAM: pyruvate%2C phosphate dikinase~PFAM: PEP-utilising enzyme%2C TIM barrel domain%3B PEP-utilising enzyme%2C mobile domain%3B Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain~TIGRFAM: pyruvate%2C phosphate dikinase gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0928 Toce_0929 Toce_0929 Toce_0929 918581 920056 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0929 Toce_0930 Toce_0930 Toce_0930 920255 921262 + deoxyguanosinetriphosphate triphosphohydrolase COGs: COG0232 dGTP triphosphohydrolase~InterPro IPR003607:IPR006261:IPR006674~KEGG: tpd:Teth39_0737 deoxyguanosinetriphosphate triphosphohydrolase-like protein~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Deoxyguanosinetriphosphate triphosphohydrolase%3B~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase~PFAM: HD domain~TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase%2C putative gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0930 Toce_0931 Toce_0931 Toce_0931 921434 923266 + DNA primase COGs: COG0358 DNA primase~InterProIPR002694:IPR006154:IPR006295:IPR013264:IPR 006171:IPR019475~KEGG: cth:Cthe_0896 DNA primase~PFAM: DNA primase catalytic core domain%3B zinc finger CHC2-family protein%3B TOPRIM domain protein%3B DNA primase%2C DnaB-helicase binding domain~SMART: zinc finger CHC2-family protein%3B Toprim sub domain protein~SPTR: DNA primase%3B~TIGRFAM: DNA primase~PFAM: DnaB-like helicase N terminal domain%3B Toprim domain%3B CHC2 zinc finger%3B DNA primase catalytic core%2C N-terminal domain%3B DnaB-helicase binding domain of primase~TIGRFAM: DNA primase%2C catalytic core gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0931 Toce_0932 Toce_0932 Toce_0932 923266 923397 + conserved hypothetical protein KEGG: mdo:100032794 hypothetical protein LOC100032794~SPTR: Putative uncharacterized protein gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0932 Toce_0933 Toce_0933 Toce_0933 923360 924463 + RNA polymerase%2C sigma 70 subunit%2C RpoD COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)~InterProIPR014284:IPR012760:IPR000943:IPR007127:IPR 009042:IPR007627:IPR007624:IPR007630~KEGG: tte:TTE1755 RNA polymerase sigma factor RpoD~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 1.1 domain protein%3B sigma-70 region 4 domain protein~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma factor RpoD%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 factor%2C region 1.1%3B Sigma-70 region 2%3B Sigma-70 factor%2C region 1.2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma factor RpoD%2C C-terminal domain%3B RNA polymerase sigma factor%2C cyanobacterial RpoD-like family gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0933 Toce_0934 Toce_0934 Toce_0934 924514 925269 + protein of unknown function DUF633 COGs: COG2384 SAM-dependent methyltransferase~InterPro IPR006901~KEGG: ckr:CKR_0857 hypothetical protein~PFAM: protein of unknown function DUF633~SPTR: Putative uncharacterized protein%3B~PFAM: Family of unknown function (DUF633) gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0934 Toce_0935 Toce_0935 Toce_0935 925196 926308 + protein of unknown function DUF34 COGs: COG3323 conserved hypothetical protein~InterPro IPR002678:IPR017221~KEGG: tit:Thit_1543 protein of unknown function DUF34~PFAM: protein of unknown function DUF34~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: NIF3 (NGG1p interacting factor 3)~TIGRFAM: conserved hypothetical protein TIGR00486 gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0935 Toce_0936 Toce_0936 Toce_0936 926550 926978 + ribonuclease H COGs: COG0328 Ribonuclease HI~InterPro IPR002156~KEGG: aoe:Clos_1283 ribonuclease H~PFAM: ribonuclease H~SPTR: Ribonuclease H%3B~PFAM: RNase H gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0936 Toce_0937 Toce_0937 Toce_0937 927467 927706 - regulatory protein%2C FmdB family COGs: COG2331 conserved hypothetical protein~InterPro IPR013429~KEGG: mta:Moth_0206 hypothetical protein~PFAM: Putative regulatory protein FmdB~SPTR: Putative uncharacterized protein%3B~TIGRFAM: regulatory protein%2C FmdB family~PFAM: Zinc ribbon domain~TIGRFAM: putative regulatory protein%2C FmdB family gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0937 Toce_0938 Toce_0938 Toce_0938 927827 929218 + Radical SAM domain protein COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)~InterPro IPR007197:IPR000385~KEGG: tex:Teth514_1460 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SPTR: Heme biosynthesis (NirJ-2) family protein%3B~PFAM: Radical SAM superfamily gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0938 Toce_0939 Toce_0939 Toce_0939 929434 929604 + Sporulation stage 0%2C Spo0E-like regulatory phosphatase InterPro IPR018540~KEGG: amt:Amet_3263 hypothetical protein~PFAM: Sporulation stage 0%2C Spo0E-like regulatory phosphatase~SPTR: Putative uncharacterized protein%3B~PFAM: Spo0E like sporulation regulatory protein gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0939 Toce_0940 Toce_0940 Toce_0940 929717 931099 + Acetylornithine transaminase COGs: COG4992 Ornithine/acetylornithine aminotransferase~InterPro IPR005814~KEGG: mta:Moth_1785 aminotransferase~PFAM: aminotransferase class-III~PRIAM: Acetylornithine transaminase~SPTR: Aminotransferase%3B~PFAM: Aminotransferase class-III gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0940 Toce_0941 Toce_0941 Toce_0941 931549 932889 + peptidase M16 domain protein COGs: COG0612 Zn-dependent peptidase~InterPro IPR007863~KEGG: tex:Teth514_2020 peptidase M16 domain-containing protein~PFAM: peptidase M16 domain protein~SPTR: Peptidase M16 domain protein%3B~PFAM: Peptidase M16 inactive domain gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0941 Toce_0942 Toce_0942 Toce_0942 932901 934178 + peptidase M16 domain protein COGs: COG0612 Zn-dependent peptidase~InterPro IPR011765:IPR007863~KEGG: tit:Thit_1492 peptidase M16 domain protein~PFAM: peptidase M16 domain protein~SPTR: Peptidase M16 domain protein%3B~PFAM: Peptidase M16 inactive domain%3B Insulinase (Peptidase family M16) gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0942 Toce_0943 Toce_0943 Toce_0943 934344 934775 + MraZ protein COGs: COG2001 conserved hypothetical protein~InterPro IPR003444:IPR020603~KEGG: aac:Aaci_1268 MraZ protein~PFAM: MraZ domain~SPTR: MraZ protein%3B~TIGRFAM: MraZ protein~PFAM: MraZ protein~TIGRFAM: mraZ protein gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0943 Toce_0944 Toce_0944 Toce_0944 934786 935727 + S-adenosyl-methyltransferase MraW COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis~InterPro IPR002903~KEGG: cth:Cthe_0981 S-adenosyl-methyltransferase MraW~PFAM: methyltransferase~SPTR: S-adenosyl-methyltransferase MraW%3B~TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: MraW methylase family~TIGRFAM: S-adenosyl-methyltransferase MraW gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0944 Toce_0945 Toce_0945 Toce_0945 935745 936104 + cell division protein FtsL InterPro IPR007060:IPR011922~KEGG: tte:TTE1652 hypothetical protein~PFAM: Septum formation initiator~SPTR: Putative uncharacterized protein%3B~TIGRFAM: cell division protein FtsL~PFAM: Cell division protein FtsL~TIGRFAM: cell division protein FtsL gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0945 Toce_0946 Toce_0946 Toce_0946 936131 938215 + stage V sporulation protein D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005543:IPR005311:IPR001460:IPR011927~KEGG: hor:Hore_09030 stage V sporulation protein D~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain%3B PASTA domain containing protein~PRIAM: Peptidoglycan glycosyltransferase~SMART: PASTA domain containing protein~SPTR: Stage V sporulation protein D%3B~TIGRFAM: stage V sporulation protein D~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain%3B PASTA domain~TIGRFAM: stage V sporulation protein D%3B penicillin-binding protein 2 gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0946 Toce_0947 Toce_0947 Toce_0947 938337 939794 + UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase~InterPro IPR000713:IPR013221:IPR004101:IPR005761~KEGG: cth:Cthe_0978 UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6- diaminopimelate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase%3B~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetases gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0947 Toce_0948 Toce_0948 Toce_0948 939791 941176 + UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase~InterPro IPR000713:IPR013221:IPR004101:IPR005863~KEGG: cth:Cthe_0977 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase%3B~TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-d iaminopimelate/D-alanyl-D-alanylligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0948 Toce_0949 Toce_0949 Toce_0949 941179 942147 + Phospho-N-acetylmuramoyl-pentapeptide-transferase COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase~InterPro IPR018480:IPR018481:IPR003524~KEGG: tit:Thit_1485 phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: Glycosyl transferase%2C family 4%2C conserved region%3B Phospho-N-acetylmuramoyl-pentapeptide transferase%2C conserved site~SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase%3B~TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase~PFAM: Glycosyl transferase family 4~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0949 Toce_0950 Toce_0950 Toce_0950 942165 943523 + UDP-N-acetylmuramoylalanine--D-glutamate ligase COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase~InterPro IPR013221:IPR004101:IPR005762~KEGG: tpd:Teth39_0811 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B~TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0950 Toce_0951 Toce_0951 Toce_0951 943539 944639 + spore cortex peptidoglycan biosynthesis regulator SpoVE COGs: COG0772 Bacterial cell division membrane protein~InterPro IPR001182:IPR013437:IPR013438~KEGG: afl:Aflv_1831 stage V sporulation protein E required for spore cortex peptidoglycan synthesis~PFAM: cell cycle protein~SPTR: Stage V sporulation protein E required for spore cortex peptidoglycan synthesis%3B~TIGRFAM: stage V sporulation protein E%3B cell division protein FtsW~PFAM: Cell cycle protein~TIGRFAM: stage V sporulation protein E%3B cell division protein FtsW gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0951 Toce_0952 Toce_0952 Toce_0952 944641 945753 + UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR004276:IPR007235:IPR006009~KEGG: drm:Dred_0675 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase~PFAM: Glycosyltransferase 28 domain%3B glycosyl transferase family 28~SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B~TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: Glycosyltransferase family 28 N-terminal domain%3B Glycosyltransferase family 28 C-terminal domain~TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0952 Toce_0953 Toce_0953 Toce_0953 945923 947308 + UDP-N-acetylmuramate--L-alanine ligase COGs: COG0773 UDP-N-acetylmuramate-alanine ligase~InterPro IPR000713:IPR013221:IPR004101:IPR005758~KEGG: pth:PTH_1860 UDP-N-acetylmuramate--L-alanine ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~SPTR: UDP-N-acetylmuramate--L-alanine ligase%3B~TIGRFAM: UDP-N-acetylmuramate/alanine ligase~manually curated~PFAM: Mur ligase family%2C glutamate ligase domain%3B Mur ligase family%2C catalytic domain%3B Mur ligase middle domain~TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase%3B UDP-N-acetylmuramate--alanine ligase gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0953 Toce_0954 Toce_0954 Toce_0954 947327 948589 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase~InterPro IPR001986:IPR005750~KEGG: pth:PTH_1858 UDP-N-acetylglucosamine enolpyruvyl transferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~SPTR: UDP-N-acetylglucosamine enolpyruvyl transferase%3B~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0954 Toce_0955 Toce_0955 Toce_0955 948602 949438 + Polypeptide-transport-associated domain protein FtsQ-type COGs: COG1589 Cell division septal protein~InterPro IPR013685~KEGG: pth:PTH_1855 cell division septal protein~PFAM: Polypeptide-transport-associated domain protein FtsQ-type~SPTR: Cell division septal protein%3B~PFAM: Cell division protein FtsQ%3B POTRA domain%2C FtsQ-type gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0955 Toce_0956 Toce_0956 Toce_0956 949435 950163 + protein of unknown function DUF881 COGs: COG3879 conserved hypothetical protein~InterPro IPR010273~KEGG: tte:TTE1642 hypothetical protein~PFAM: protein of unknown function DUF881~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF881) gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0956 Toce_0957 Toce_0957 Toce_0957 950165 950509 + protein of unknown function DUF1290 COGs: COG3856 conserved hypothetical protein (small basic protein)~InterPro IPR009709~KEGG: mta:Moth_0848 hypothetical protein~PFAM: protein of unknown function DUF1290~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1290) gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0957 Toce_0958 Toce_0958 Toce_0958 950597 951814 + cell division protein FtsA COGs: COG0849 Actin-like ATPase involved in cell division~InterPro IPR003494:IPR020823~KEGG: pjd:Pjdr2_3886 cell division protein FtsA~PFAM: cell division protein FtsA~SPTR: Cell division protein FtsA%3B~TIGRFAM: cell division protein FtsA~PFAM: Cell division protein FtsA~TIGRFAM: cell division protein FtsA gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0958 Toce_0959 Toce_0959 Toce_0959 951837 952889 + cell division protein FtsZ COGs: COG0206 Cell division GTPase~InterPro IPR000158:IPR003008:IPR018316:IPR020805~KEGG: amt:Amet_2873 cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ%2C 2-layer sandwich domain~SPTR: Cell division protein ftsZ%3B~TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ family%2C GTPase domain%3B FtsZ family%2C C-terminal domain~TIGRFAM: cell division protein FtsZ gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0959 Toce_0960 Toce_0960 Toce_0960 953033 953926 + sigma-E processing peptidase SpoIIGA InterPro IPR005081~KEGG: aoe:Clos_1386 peptidase U4 sporulation factor SpoIIGA~PFAM: peptidase U4 sporulation factor SpoIIGA~SPTR: Peptidase U4 sporulation factor SpoIIGA%3B~TIGRFAM: sigma-E processing peptidase SpoIIGA~PFAM: Sporulation factor SpoIIGA~TIGRFAM: sigma-E processing peptidase SpoIIGA gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0960 Toce_0961 Toce_0961 Toce_0961 953951 954670 + RNA polymerase%2C sigma 29 subunit%2C SigE COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterProIPR000943:IPR007627:IPR007630:IPR016263:IPR 014200:IPR014284~KEGG: pth:PTH_1846 sporulation sigma factor SigE~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-E factor%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-E factor gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0961 Toce_0962 Toce_0962 Toce_0962 954747 955520 + RNA polymerase%2C sigma subunit%2C RpsG/SigG COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterProIPR000943:IPR007627:IPR007624:IPR007630:IPR 014212:IPR014322:IPR014284~KEGG: tit:Thit_1473 RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG subfamily~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 4 domain protein~SPTR: RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG subfamily%3B~TIGRFAM: RNA polymerase sigma-G factor%3B RNA polymerase sigma-70 factor%2C sigma-B/F/G subfamily%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma-G factor%3B RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-70 factor%2C sigma-B/F/G subfamily gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0962 Toce_0963 Toce_0963 Toce_0963 955537 955722 + hypothetical protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0963 Toce_0964 Toce_0964 Toce_0964 955862 956122 + sporulation protein%2C YlmC/YmxH family COGs: COG1873 conserved hypothetical protein~InterPro IPR007903:IPR014238~KEGG: csc:Csac_1196 PRC-barrel domain-containing protein~PFAM: PRC-barrel domain protein~SPTR: PRC-barrel domain protein%3B~TIGRFAM: sporulation protein%2C YlmC/YmxH family~PFAM: PRC-barrel domain~TIGRFAM: sporulation protein%2C YlmC/YmxH family gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0964 Toce_0965 Toce_0965 Toce_0965 956200 957900 + Radical SAM domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR006638:IPR006158:IPR007197~KEGG: vpr:Vpar_1433 radical SAM domain protein~PFAM: Radical SAM domain protein%3B cobalamin B12-binding domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily%3B B12 binding domain gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0965 Toce_0966 Toce_0966 Toce_0966 957904 958728 + protein of unknown function DUF152 COGs: COG1496 conserved hypothetical protein~InterPro IPR003730~KEGG: tex:Teth514_0117 hypothetical protein~PFAM: protein of unknown function DUF152~SPTR: Putative uncharacterized protein%3B~PFAM: Multi-copper polyphenol oxidoreductase laccase~TIGRFAM: conserved hypothetical protein TIGR00726 gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0966 Toce_0967 Toce_0967 Toce_0967 958748 959446 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: chy:CHY_2047 DNA-binding response regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: DNA-binding response regulator%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal~TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0967 Toce_0968 Toce_0968 Toce_0968 959452 961182 + multi-sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterProIPR003660:IPR000014:IPR003661:IPR003594:IPR 004358:IPR013656:IPR005467:IPR000700~KEGG: mta:Moth_2494 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B PAS fold-4 domain protein%3B histidine kinase HAMP region domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS domain containing protein~SPTR: Sensor protein%3B~TIGRFAM: PAS sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0968 Toce_0969 Toce_0969 Toce_0969 961259 962035 + phosphate ABC transporter ATP-binding protein%2C PhoT family COGs: COG1117 ABC-type phosphate transport system ATPase component~InterProIPR003593:IPR003439:IPR017871:IPR005670:IPR 015850~KEGG: cbk:CLL_A1200 phosphate ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Phosphate ABC transporter%2C ATP-binding protein%3B~TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter~TIGRFAM: phosphate ABC transporter%2C ATP-binding protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0969 Toce_0970 Toce_0970 Toce_0970 962050 962712 + phosphate uptake regulator%2C PhoU COGs: COG0704 Phosphate uptake regulator~InterPro IPR008170~KEGG: tpd:Teth39_0831 phosphate uptake regulator%2C PhoU~PFAM: PhoU family protein~SPTR: Phosphate uptake regulator%2C PhoU%3B~TIGRFAM: phosphate transport system regulatory protein PhoU~PFAM: PhoU domain~TIGRFAM: phosphate transport system regulatory protein PhoU gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0970 Toce_0971 Toce_0971 Toce_0971 962813 963460 + protein of unknown function DUF1614 InterPro IPR011672~KEGG: tpd:Teth39_0832 hypothetical protein~PFAM: protein of unknown function DUF1614~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1614) gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0971 Toce_0972 Toce_0972 Toce_0972 963447 964616 + stage II sporulation protein P InterPro IPR010897~KEGG: tit:Thit_1462 stage II sporulation protein P~PFAM: Stage II sporulation P family protein~SPTR: Stage II sporulation P family protein%3B~TIGRFAM: stage II sporulation protein P~PFAM: Stage II sporulation protein P (SpoIIP)~TIGRFAM: stage II sporulation protein P gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0972 Toce_0973 Toce_0973 Toce_0973 964620 965513 + conserved hypothetical protein KEGG: drm:Dred_1157 hypothetical protein~SPTR: Putative uncharacterized protein gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0973 Toce_0974 Toce_0974 Toce_0974 965523 965717 + conserved hypothetical protein KEGG: amt:Amet_2861 hypothetical protein~SPTR: Putative uncharacterized protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0974 Toce_0975 Toce_0975 Toce_0975 965731 966177 + conserved hypothetical protein KEGG: tte:TTE1621 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3189) gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0975 Toce_0976 Toce_0976 Toce_0976 966190 966660 + conserved hypothetical protein KEGG: tit:Thit_1458 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3189) gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0976 Toce_0977 Toce_0977 Toce_0977 966747 968069 + protein of unknown function DUF512 COGs: COG1625 Fe-S oxidoreductase related to NifB/MoaA family~InterPro IPR001478:IPR007549~KEGG: cth:Cthe_1025 hypothetical protein~PFAM: protein of unknown function DUF512%3B PDZ/DHR/GLGF domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: PDZ domain (Also known as DHR or GLGF)%3B Protein of unknown function (DUF512)~TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0977 Toce_0978 Toce_0978 Toce_0978 968066 969376 + ribosome-associated GTPase EngA COGs: COG1160 GTPase~InterPro IPR006073:IPR002917:IPR016484:IPR005225~KEGG: tpd:Teth39_0839 GTP-binding protein EngA~PFAM: GTP-binding protein HSR1-related~SPTR: GTP-binding protein engA%3B~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein domain gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0978 Toce_0979 Toce_0979 Toce_0979 969402 970448 + glycerol 3-phosphate dehydrogenase (NAD(P)+) COGs: COG0240 Glycerol-3-phosphate dehydrogenase~InterPro IPR006168:IPR011128:IPR006109:IPR010916~KEGG: cth:Cthe_1022 glycerol-3-phosphate dehydrogenase (NAD(P)(+))~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein~SPTR: Glycerol-3-phosphate dehydrogenase%3B~PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus%3B NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0979 Toce_0980 Toce_0980 Toce_0980 970607 972085 + stage IV sporulation protein A InterPro IPR014201~KEGG: drm:Dred_1163 stage IV sporulation protein A~PFAM: Sporulation stage IV protein A~SPTR: Stage IV sporulation protein A%3B~TIGRFAM: stage IV sporulation protein A~PFAM: Stage IV sporulation protein A (spore_IV_A)~TIGRFAM: stage IV sporulation protein A gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0980 Toce_0981 Toce_0981 Toce_0981 972265 973128 + rRNA (guanine-N(1)-)-methyltransferase InterPro IPR013216:IPR016718~KEGG: pjd:Pjdr2_1632 hypothetical protein~PFAM: Methyltransferase type 11~PRIAM: rRNA (guanine-N(1)-)-methyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Methyltransferase domain gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0981 Toce_0982 Toce_0982 Toce_0982 973403 974335 + integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR002104~KEGG: nth:Nther_1227 integrase family protein~PFAM: integrase family protein~SPTR: Integrase family protein%3B~manually curated~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0982 Toce_0983 Toce_0983 Toce_0983 974349 975194 + replication initiator A domain protein InterPro IPR010724:IPR001808~KEGG: sau:SAP001 hypothetical protein~PFAM: replication initiator A domain protein%3B regulatory protein Crp~SPTR: Replication-associated protein RepA%3B~PFAM: Replication initiator protein A (RepA) N-terminus gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0983 Toce_0984 Toce_0984 Toce_0984 975182 975412 + hypothetical protein KEGG: afl:Aflv_0783 hypothetical protein~SPTR: Predicted protein gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0984 Toce_0985 Toce_0985 Toce_0985 975425 975568 + hypothetical protein gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0985 Toce_0986 Toce_0986 Toce_0986 975710 977233 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0986 Toce_0987 Toce_0987 Toce_0987 977227 977958 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0987 Toce_0988 Toce_0988 Toce_0988 978524 978877 + conserved hypothetical protein KEGG: gwc:GWCH70_2839 hypothetical protein~SPTR: Putative uncharacterized protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0988 Toce_0989 Toce_0989 Toce_0989 978892 980136 + hypothetical protein KEGG: swo:Swol_1076 Ig-like domain-containing protein~SPTR: Surface proteins containing Ig-like domains-like%3B~PFAM: The GLUG motif gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0989 Toce_0990 Toce_0990 Toce_0990 980136 980411 + conserved hypothetical protein KEGG: gwc:GWCH70_2837 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0990 Toce_0991 Toce_0991 Toce_0991 980469 980948 + hypothetical protein KEGG: swo:Swol_1315 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0991 Toce_0992 Toce_0992 Toce_0992 980963 981847 + conserved hypothetical protein KEGG: swo:Swol_1314 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0992 Toce_0993 Toce_0993 Toce_0993 981972 982160 + helix-turn-helix domain protein InterPro IPR001387~KEGG: bcy:Bcer98_1286 hypothetical protein~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0993 Toce_0994 Toce_0994 Toce_0994 982150 982383 + conserved hypothetical protein KEGG: dhd:Dhaf_1452 hypothetical protein~SPTR: Lipoprotein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0994 Toce_0995 Toce_0995 Toce_0995 982611 982751 - hypothetical protein gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0995 Toce_0996 Toce_0996 Toce_0996 983150 983347 + hypothetical protein KEGG: nth:Nther_1239 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0996 Toce_0997 Toce_0997 Toce_0997 983601 984413 + hypothetical protein KEGG: ptm:GSPATT00032479001 hypothetical protein~SPTR: Putative uncharacterized protein ycf1 gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0997 Toce_0998 Toce_0998 Toce_0998 984480 985259 + conserved hypothetical protein KEGG: swo:Swol_1313 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0998 Toce_0999 Toce_0999 Toce_0999 985371 985802 + conserved hypothetical protein KEGG: bcy:Bcer98_1290 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_0999 Toce_1000 Toce_1000 Toce_1000 985840 987423 + conserved hypothetical protein KEGG: drm:Dred_2129 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Terminase-like family gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1000 Toce_1001 Toce_1001 Toce_1001 987535 988845 + Bacteriophage portal protein%2C SPP1 Gp6 InterPro IPR021145~KEGG: drm:Dred_0374 phage portal protein%2C SPP1~PFAM: Bacteriophage portal protein%2C SPP1 Gp6-like~SPTR: Phage portal protein%2C SPP1%3B~PFAM: Phage portal protein%2C SPP1 Gp6-like~TIGRFAM: phage portal protein%2C SPP1 family gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1001 Toce_1002 Toce_1002 Toce_1002 989437 989766 + conserved hypothetical protein KEGG: nth:Nther_1229 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1002 Toce_1003 Toce_1003 Toce_1003 989778 990350 + Ig domain-containing protein KEGG: drm:Dred_2125 Ig domain-containing protein~SPTR: Ig domain protein%2C group 2 domain protein gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1003 Toce_1004 Toce_1004 Toce_1004 991079 992494 + MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: nth:Nther_0991 MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE~SPTR: MATE efflux family protein%3B~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1004 Toce_1005 Toce_1005 Toce_1005 992570 993787 + hypothetical protein KEGG: tte:TTE1601 membrane-fusion protein~SPTR: Membrane-fusion protein%3B~TIGRFAM: putative membrane fusion protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1005 Toce_1006 Toce_1006 Toce_1006 993763 994452 + alanine racemase domain protein COGs: COG0325 enzyme with a TIM-barrel fold~InterPro IPR001608:IPR011078~KEGG: cce:Ccel_0596 alanine racemase domain protein~PFAM: alanine racemase domain protein~SPTR: Alanine racemase domain protein%3B~PFAM: Alanine racemase%2C N-terminal domain~TIGRFAM: pyridoxal phosphate enzyme%2C YggS family gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1006 Toce_1007 Toce_1007 Toce_1007 994473 994919 + protein of unknown function DUF552 COGs: COG1799 conserved hypothetical protein~InterPro IPR007561~KEGG: amt:Amet_2803 hypothetical protein~PFAM: protein of unknown function DUF552~SPTR: Cell division protein sepF%3B~PFAM: Protein of unknown function (DUF552) gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1007 Toce_1008 Toce_1008 Toce_1008 994940 995221 + protein of unknown function YGGT InterPro IPR003425~KEGG: pth:PTH_1825 integral membrane protein~PFAM: protein of unknown function YGGT~SPTR: Putative uncharacterized protein%3B~PFAM: YGGT family gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1008 Toce_1009 Toce_1009 Toce_1009 995245 995883 + DivIVA domain protein COGs: COG3599 Cell division initiation protein~InterPro IPR007793:IPR019933~KEGG: nth:Nther_1319 DivIVA family protein~PFAM: DivIVA family protein~SPTR: DivIVA family protein%3B~TIGRFAM: DivIVA domain~PFAM: DivIVA protein~TIGRFAM: DivIVA domain gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1009 Toce_1010 Toce_1010 Toce_1010 995834 996088 + conserved hypothetical protein KEGG: tte:TTE1595 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1010 Toce_1011 Toce_1011 Toce_1011 996116 996823 + methylthioadenosine nucleosidase COGs: COG0775 Nucleoside phosphorylase~InterPro IPR000845:IPR010049~KEGG: cdf:CD2611 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase~PFAM: purine or other phosphorylase family 1~PRIAM: Adenosylhomocysteine nucleosidase~SPTR: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase%3B~TIGRFAM: MTA/SAH nucleosidase~PFAM: Phosphorylase superfamily~TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1011 Toce_1012 Toce_1012 Toce_1012 996864 997160 + conserved hypothetical protein KEGG: swo:Swol_0963 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1012 Toce_1013 Toce_1013 Toce_1013 997179 997820 + transcriptional regulator%2C TraR/DksA family COGs: COG1734 DnaK suppressor protein~InterPro IPR000962:IPR020458:IPR014240~KEGG: hor:Hore_09300 transcriptional regulator%2C TraR/DksA family~PFAM: zinc finger DksA/TraR C4-type~SPTR: Transcriptional regulator%2C TraR/DksA family%3B~TIGRFAM: sporulation protein%2C yteA family~PFAM: Prokaryotic dksA/traR C4-type zinc finger~TIGRFAM: sporulation protein%2C yteA family%3B RNA polymerase-binding protein DksA gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1013 Toce_1014 Toce_1014 Toce_1014 997916 998368 + lipoprotein signal peptidase COGs: COG0597 Lipoprotein signal peptidase~InterPro IPR001872~KEGG: hmo:HM1_2103 signal peptidase II~PFAM: peptidase A8 signal peptidase II~SPTR: Signal peptidase ii%3B~TIGRFAM: lipoprotein signal peptidase~PFAM: Signal peptidase (SPase) II~TIGRFAM: lipoprotein signal peptidase gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1014 Toce_1015 Toce_1015 Toce_1015 998389 999312 + ribosomal large subunit pseudouridine synthase D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific~InterPro IPR002942:IPR006145:IPR006224:IPR006225~KEGG: tte:TTE1538 pseudouridylate synthase%2C 23S RNA-specific~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Pseudouridine synthase%3B~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase%2C RluA family gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1015 Toce_1016 Toce_1016 Toce_1016 999313 999849 + Uracil phosphoribosyltransferase COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase~InterPro IPR000836~KEGG: cth:Cthe_0954 uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase~PRIAM: Uracil phosphoribosyltransferase~SPTR: Phosphoribosyltransferase%3B~PFAM: Phosphoribosyl transferase domain gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1016 Toce_1017 Toce_1017 Toce_1017 999866 1001620 - Fibronectin-binding A domain protein COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP~InterPro IPR008616:IPR008532~KEGG: tte:TTE1517 RNA-binding protein snRNP~PFAM: Fibronectin-binding A domain protein%3B protein of unknown function DUF814~SPTR: Predicted RNA-binding protein homologous to eukaryotic snRNP%3B~PFAM: Domain of unknown function (DUF814)%3B Fibronectin-binding protein A N-terminus (FbpA) gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1017 Toce_1018 Toce_1018 Toce_1018 1001738 1002589 + diaminopimelate epimerase COGs: COG0253 Diaminopimelate epimerase~InterPro IPR001653:IPR018510~KEGG: cth:Cthe_3100 diaminopimelate epimerase~PFAM: diaminopimelate epimerase~PRIAM: Diaminopimelate epimerase~SPTR: Diaminopimelate epimerase%3B~TIGRFAM: diaminopimelate epimerase~PFAM: Diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1018 Toce_1019 Toce_1019 Toce_1019 1002623 1003786 + LL-diaminopimelate aminotransferase apoenzyme COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839:IPR019881~KEGG: chy:CHY_1492 LL-diaminopimelate aminotransferase~PFAM: aminotransferase class I and II~SPTR: LL-diaminopimelate aminotransferase%3B~TIGRFAM: LL-diaminopimelate aminotransferase~PFAM: Aminotransferase class I and II~TIGRFAM: LL-diaminopimelate aminotransferase gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1019 Toce_1020 Toce_1020 Toce_1020 1003810 1004679 + YicC domain protein COGs: COG1561 Uncharacterized stress-induced protein~InterPro IPR013527:IPR013551:IPR005229~KEGG: cth:Cthe_1317 hypothetical protein~PFAM: YicC domain protein%3B domain of unknown function DUF1732~SPTR: Putative uncharacterized protein%3B~PFAM: YicC-like family%2C N-terminal region%3B Domain of unknown function (DUF1732)~TIGRFAM: conserved hypothetical protein TIGR00255 gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1020 Toce_1021 Toce_1021 Toce_1021 1004699 1004968 + protein of unknown function DUF370 COGs: COG2052 conserved hypothetical protein~InterPro IPR007169~KEGG: ckr:CKR_1260 hypothetical protein~PFAM: protein of unknown function DUF370~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF370) gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1021 Toce_1022 Toce_1022 Toce_1022 1004981 1005595 + guanylate kinase COGs: COG0194 Guanylate kinase~InterPro IPR008145:IPR008144:IPR020590:IPR017665~KEGG: tit:Thit_1318 guanylate kinase~PFAM: guanylate kinase~PRIAM: Guanylate kinase~SMART: guanylate kinase/L-type calcium channel region~SPTR: Guanylate kinase%3B~TIGRFAM: guanylate kinase~PFAM: Guanylate kinase~TIGRFAM: guanylate kinase gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1022 Toce_1023 Toce_1023 Toce_1023 1005599 1005805 + DNA-directed RNA polymerase subunit omega COGs: COG1758 DNA-directed RNA polymerase subunit K/omega~InterPro IPR006110:IPR003716~KEGG: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~SPTR: DNA-directed RNA polymerase%2C omega subunit%3B~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1023 Toce_1024 Toce_1024 Toce_1024 1005819 1007024 + Phosphopantothenoylcysteine decarboxylase %3BPhosphopantothenate-cysteine ligase COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase~InterPro IPR003382:IPR007085:IPR005252~KEGG: gem:GM21_2546 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA/pantothenate metabolism flavoprotein domain protein%3B flavoprotein~PRIAM: Phosphopantothenate--cysteine ligase~SPTR: Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase%3B~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA / pantothenate metabolism flavoprotein%3B Flavoprotein~TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase%2C prokaryotic gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1024 Toce_1025 Toce_1025 Toce_1025 1007086 1009284 + transcriptional regulator%2C TrmB COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase~InterProIPR014001:IPR001650:IPR006935:IPR005259:IPR 014021~KEGG: tte:TTE1508 primosomal protein N~PFAM: type III restriction protein res subunit%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Primosomal protein N (Replication factor Y)-superfamily II helicase%3B~TIGRFAM: primosomal protein N'~PFAM: Helicase conserved C-terminal domain%3B Sugar-specific transcriptional regulator TrmB%3B Type III restriction enzyme%2C res subunit~TIGRFAM: primosomal protein N' gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1025 Toce_1026 Toce_1026 Toce_1026 1009299 1009766 + peptide deformylase COGs: COG0242 N-formylmethionyl-tRNA deformylase~InterPro IPR000181~KEGG: cth:Cthe_0567 peptide deformylase~PFAM: formylmethionine deformylase~SPTR: Peptide deformylase%3B~TIGRFAM: peptide deformylase~PFAM: Polypeptide deformylase~TIGRFAM: peptide deformylase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1026 Toce_1027 Toce_1027 Toce_1027 1009771 1010712 + methionyl-tRNA formyltransferase COGs: COG0223 Methionyl-tRNA formyltransferase~InterPro IPR002376:IPR005793:IPR005794~KEGG: gme:Gmet_3339 methionyl-tRNA formyltransferase~PFAM: formyl transferase domain protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: methionyl-tRNA formyltransferase~PFAM: Formyl transferase%3B Formyl transferase%2C C-terminal domain~TIGRFAM: methionyl-tRNA formyltransferase gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1027 Toce_1028 Toce_1028 Toce_1028 1010696 1011508 + protein of unknown function DUF116 COGs: COG1852 conserved hypothetical protein~InterPro IPR002829~KEGG: mta:Moth_0899 hypothetical protein~PFAM: protein of unknown function DUF116~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF116 gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1028 Toce_1029 Toce_1029 Toce_1029 1011489 1012841 + sun protein COGs: COG0144 tRNA and rRNA cytosine-C5-methylase~InterProIPR006027:IPR001678:IPR018314:IPR004573:IPR 011023~KEGG: cth:Cthe_0571 sun protein~PFAM: Fmu (Sun) domain protein%3B NusB/RsmB/TIM44~SPTR: Sun protein%3B~TIGRFAM: sun protein%3B RNA methylase%2C NOL1/NOP2/sun family~PFAM: NOL1/NOP2/sun family%3B NusB family~TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB%3B NOL1/NOP2/sun family putative RNA methylase%3B transcription antitermination factor NusB gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1029 Toce_1030 Toce_1030 Toce_1030 1012855 1013895 + 23S rRNA m(2)A-2503 methyltransferase COGs: COG0820 Fe-S-cluster redox enzyme~InterPro IPR007197:IPR004383~KEGG: cth:Cthe_0572 ribosomal RNA large subunit methyltransferase N~PFAM: Radical SAM domain protein~SPTR: Radical SAM enzyme%2C Cfr family%3B~TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM superfamily~TIGRFAM: radical SAM enzyme%2C Cfr family gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1030 Toce_1031 Toce_1031 Toce_1031 1013892 1014653 + protein serine/threonine phosphatase COGs: COG0631 Serine/threonine protein phosphatase~InterPro IPR001932:IPR014045~KEGG: cth:Cthe_0573 protein serine/threonine phosphatases~PFAM: Protein phosphatase 2C-like~PRIAM: Phosphoprotein phosphatase~SMART: protein phosphatase 2C domain protein~SPTR: Protein serine/threonine phosphatase%3B~PFAM: Protein phosphatase 2C gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1031 Toce_1032 Toce_1032 Toce_1032 1014672 1016528 + serine/threonine protein kinase with PASTA sensor(s) COGs: COG0515 Serine/threonine protein kinase~InterProIPR020635:IPR002290:IPR005543:IPR017442:IPR 017441:IPR008271:IPR000719~KEGG: tpd:Teth39_1313 serine/threonine protein kinase with PASTA sensor(s)~PFAM: Serine/threonine-protein kinase-like domain%3B PASTA domain containing protein~SMART: serine/threonine protein kinase%3B Tyrosine-protein kinase%2C catalytic domain%3B PASTA domain containing protein~SPTR: Serine/threonine protein kinase with PASTA sensor(S)%3B~PFAM: Protein kinase domain%3B PASTA domain gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1032 Toce_1033 Toce_1033 Toce_1033 1016541 1017197 + ribulose-5-phosphate 3-epimerase COGs: COG0036 Pentose-5-phosphate-3-epimerase~InterPro IPR000056~KEGG: amt:Amet_2777 ribulose-phosphate 3-epimerase~PFAM: ribulose-phosphate 3-epimerase~PRIAM: Ribulose-phosphate 3-epimerase~SPTR: Ribulose-phosphate 3-epimerase%3B~TIGRFAM: ribulose-phosphate 3-epimerase~PFAM: Ribulose-phosphate 3 epimerase family~TIGRFAM: ribulose-phosphate 3-epimerase gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1033 Toce_1034 Toce_1034 Toce_1034 1017451 1017543 + Stage V sporulation family protein InterPro IPR012609~KEGG: bay:RBAM_015640 stage V sporulation protein M~PFAM: Stage V sporulation family protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1034 Toce_1035 Toce_1035 Toce_1035 1017573 1017761 - LSU ribosomal protein L28P InterPro IPR001383~KEGG: dae:Dtox_1163 ribosomal protein L28~PFAM: ribosomal protein L28~SPTR: Ribosomal protein L28%3B~TIGRFAM: ribosomal protein L28~PFAM: Ribosomal L28 family~TIGRFAM: ribosomal protein L28 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1035 Toce_1036 Toce_1036 Toce_1036 1017955 1018308 + protein of unknown function DUF322 COGs: COG1302 conserved hypothetical protein~InterPro IPR005531~KEGG: nth:Nther_1344 protein of unknown function DUF322~PFAM: protein of unknown function DUF322~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF322) gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1036 Toce_1037 Toce_1037 Toce_1037 1018331 1019959 + DAK2 domain fusion protein YloV COGs: COG1461 kinase related to dihydroxyacetone kinase~InterPro IPR004007:IPR019986~KEGG: amt:Amet_2771 Dak phosphatase~PFAM: Dak phosphatase~SPTR: Dak phosphatase%3B~TIGRFAM: DAK2 domain fusion protein YloV~PFAM: DAK2 domain~TIGRFAM: DAK2 domain fusion protein YloV gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1037 Toce_1038 Toce_1038 Toce_1038 1019976 1022000 + ATP-dependent DNA helicase RecG COGs: COG1200 RecG-like helicase~InterProIPR014001:IPR001650:IPR004365:IPR011545:IPR 004609:IPR014021~KEGG: tte:TTE1492 ATP-dependent DNA helicase RecG~PFAM: DEAD/DEAH box helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: RecG-like helicase%3B~TIGRFAM: ATP-dependent DNA helicase RecG~manually curated~PFAM: Helicase conserved C-terminal domain%3B DEAD/DEAH box helicase~TIGRFAM: ATP-dependent DNA helicase RecG gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1038 Toce_1039 Toce_1039 Toce_1039 1022129 1022353 + small acid-soluble spore protein alpha/beta type InterPro IPR001448:IPR018126~KEGG: nth:Nther_1585 small acid-soluble spore protein alpha/beta type~PFAM: small acid-soluble spore protein alpha/beta type~SPTR: Small acid-soluble spore protein alpha/beta type%3B~PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1039 Toce_1040 Toce_1040 Toce_1040 1022615 1023169 + methyltransferase COGs: COG0742 N6-adenine-specific methylase~InterPro IPR004398:IPR002052~KEGG: tit:Thit_1294 methyltransferase~PFAM: conserved hypothetical protein~SPTR: Methyltransferase%3B~TIGRFAM: methyltransferase~PFAM: Conserved hypothetical protein 95~TIGRFAM: RNA methyltransferase%2C RsmD family gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1040 Toce_1041 Toce_1041 Toce_1041 1023169 1023648 + Phosphopantetheine adenylyltransferase COGs: COG0669 Phosphopantetheine adenylyltransferase~InterPro IPR001980:IPR004820:IPR004821~KEGG: tpd:Teth39_1300 phosphopantetheine adenylyltransferase~PFAM: cytidylyltransferase~PRIAM: Pantetheine-phosphate adenylyltransferase~SPTR: Pantetheine-phosphate adenylyltransferase%3B~TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: Cytidylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%2C bacterial%3B cytidyltransferase-related domain gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1041 Toce_1042 Toce_1042 Toce_1042 1023673 1024119 + conserved hypothetical protein KEGG: adg:Adeg_0114 hypothetical protein~SPTR: Archaeal/vacuolar-type H+-ATPase subunit H gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1042 Toce_1043 Toce_1043 Toce_1043 1024123 1025382 - sporulation integral membrane protein YlbJ COGs: COG3314 conserved hypothetical protein~InterPro IPR011642:IPR014226~KEGG: hor:Hore_10150 sporulation integral membrane protein YlbJ~PFAM: nucleoside recognition domain protein~SPTR: Sporulation integral membrane protein YlbJ%3B~TIGRFAM: sporulation integral membrane protein YlbJ~PFAM: Nucleoside recognition~TIGRFAM: sporulation integral membrane protein YlbJ gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1043 Toce_1044 Toce_1044 Toce_1044 1025479 1026264 + Patatin COGs: COG1752 esterase of the alpha-beta hydrolase superfamily~InterPro IPR002641~KEGG: patatin~PFAM: Patatin~SPTR: Patatin%3B~PFAM: Patatin-like phospholipase gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1044 Toce_1045 Toce_1045 Toce_1045 1026261 1027265 + PDZ/DHR/GLGF domain protein COGs: COG3480 secreted protein containing a PDZ domain~InterPro IPR001478~KEGG: nth:Nther_1352 PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~SPTR: PDZ/DHR/GLGF domain protein%3B~PFAM: Lon protease (S16) C-terminal proteolytic domain gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1045 Toce_1046 Toce_1046 Toce_1046 1027247 1028509 - cytidyltransferase-related domain protein COGs: COG1323 nucleotidyltransferase~InterPro IPR008513:IPR004821~KEGG: hor:Hore_10190 predicted nucleotidyltransferase~PFAM: protein of unknown function DUF795~SPTR: Putative uncharacterized protein%3B~TIGRFAM: cytidyltransferase-related domain protein~manually curated~PFAM: Protein of unknown function (DUF795)~TIGRFAM: cytidyltransferase-related domain gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1046 Toce_1047 Toce_1047 Toce_1047 1028687 1029685 + phosphotransacetylase COGs: COG0280 Phosphotransacetylase~InterPro IPR002505:IPR012147:IPR004614~KEGG: tte:TTE1482 phosphotransacetylase~PFAM: phosphate acetyl/butaryl transferase~PRIAM: Phosphate acetyltransferase~SPTR: Phosphotransacetylase%3B~TIGRFAM: phosphate acetyltransferase~PFAM: Phosphate acetyl/butaryl transferase~TIGRFAM: phosphate acetyltransferase gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1047 Toce_1048 Toce_1048 Toce_1048 1029712 1030902 + acetate kinase COGs: COG0282 Acetate kinase~InterPro IPR000890:IPR004372~KEGG: dhd:Dhaf_3826 acetate kinase~PFAM: acetate and butyrate kinase~SPTR: Acetate kinase%3B~TIGRFAM: acetate kinase~PFAM: Acetokinase family~TIGRFAM: acetate kinase gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1048 Toce_1049 Toce_1049 Toce_1049 1030972 1031490 + protein of unknown function DUF177 COGs: COG1399 metal-binding possibly nucleic acid-binding protein~InterPro IPR003772~KEGG: tpd:Teth39_1294 hypothetical protein~PFAM: protein of unknown function DUF177~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized ACR%2C COG1399 gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1049 Toce_1050 Toce_1050 Toce_1050 1031502 1031684 + LSU ribosomal protein L32P COGs: COG0333 Ribosomal protein L32~InterPro IPR002677~KEGG: cce:Ccel_2134 ribosomal protein L32~PFAM: ribosomal L32p protein~SPTR: Ribosomal protein L32%3B~TIGRFAM: ribosomal protein L32~PFAM: Ribosomal L32p protein family~TIGRFAM: ribosomal protein L32 gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1050 Toce_1051 Toce_1051 Toce_1051 1031838 1032413 + thioesterase superfamily protein InterPro IPR001034:IPR006683:IPR017275~KEGG: tit:Thit_1285 protein for fatty acid biosynthesis transcriptional regulation~PFAM: thioesterase superfamily protein%3B regulatory protein DeoR~SPTR: Protein for fatty acid biosynthesis transcriptional regulation%3B~manually curated~PFAM: Thioesterase superfamily%3B DeoR-like helix-turn-helix domain gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1051 Toce_1052 Toce_1052 Toce_1052 1032410 1033411 + phosphate:acyl-(acyl carrier protein) acyltransferase COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme~InterPro IPR003664:IPR012281~KEGG: hmo:HM1_2161 fatty acid/phospholipid synthesis protein PlsX~PFAM: fatty acid synthesis plsX protein~SPTR: Phosphate acyltransferase%3B~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX~PFAM: Fatty acid synthesis protein~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1052 Toce_1053 Toce_1053 Toce_1053 1033408 1034394 + 3-oxoacyl-(acyl-carrier-protein) synthase III COGs: COG0332 3-oxoacyl-(acyl-carrier-protein)~InterPro IPR013751:IPR013747:IPR004655~KEGG: tte:TTE1475 3-oxoacyl-(acyl carrier protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I~SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3%3B~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1053 Toce_1054 Toce_1054 Toce_1054 1034416 1035252 + degV family protein COGs: COG1307 conserved hypothetical protein~InterPro IPR003797~KEGG: nth:Nther_1346 DegV family protein~PFAM: DegV family protein~SPTR: DegV family protein%3B~TIGRFAM: degV family protein~PFAM: Uncharacterised protein%2C DegV family COG1307~TIGRFAM: EDD domain protein%2C DegV family gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1054 Toce_1055 Toce_1055 Toce_1055 1035270 1036217 + enoyl-(acyl-carrier-protein) reductase II COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase~InterPro IPR004136:IPR017569~KEGG: tex:Teth514_1725 2-nitropropane dioxygenase%2C NPD~PFAM: 2-nitropropane dioxygenase NPD~SPTR: 2-nitropropane dioxygenase%2C NPD%3B~TIGRFAM: enoyl-(acyl-carrier-protein) reductase II~PFAM: 2-nitropropane dioxygenase~TIGRFAM: putative enoyl-(acyl-carrier-protein) reductase II gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1055 Toce_1056 Toce_1056 Toce_1056 1036223 1037164 + (Acyl-carrier-protein) S-malonyltransferase COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase~InterPro IPR014043:IPR004410~KEGG: tte:TTE1473 acyl-carrier-protein S-malonyltransferase~PFAM: Acyl transferase~SPTR: (Acyl-carrier-protein) S-malonyltransferase%3B~TIGRFAM: malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase domain~TIGRFAM: malonyl CoA-acyl carrier protein transacylase gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1056 Toce_1057 Toce_1057 Toce_1057 1037164 1037910 + 3-oxoacyl-(acyl-carrier-protein) reductase COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterProIPR002347:IPR002198:IPR020904:IPR020592:IPR 011284~KEGG: adg:Adeg_0958 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase%3B~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short chain dehydrogenase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1057 Toce_1058 Toce_1058 Toce_1058 1037979 1038212 + acyl carrier protein COGs: COG0236 Acyl carrier protein~InterPro IPR006163:IPR006162:IPR003231:IPR009081~KEGG: chy:CHY_1446 acyl carrier protein~PFAM: phosphopantetheine-binding~SPTR: Acyl carrier protein%3B~TIGRFAM: acyl carrier protein~PFAM: Phosphopantetheine attachment site~TIGRFAM: acyl carrier protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1058 Toce_1059 Toce_1059 Toce_1059 1038284 1039528 + 3-oxoacyl-(acyl-carrier-protein) synthase II COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase~InterPro IPR014030:IPR014031:IPR018201:IPR017568~KEGG: aoe:Clos_1457 beta-ketoacyl synthase~PFAM: Beta-ketoacyl synthase~SPTR: Beta-ketoacyl synthase%3B~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase%2C N-terminal domain%3B Beta-ketoacyl synthase%2C C-terminal domain~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2 gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1059 Toce_1060 Toce_1060 Toce_1060 1039544 1040269 + RNAse III COGs: COG0571 dsRNA-specific ribonuclease~InterPro IPR000999:IPR001159:IPR011907~KEGG: aoe:Clos_1458 ribonuclease III~PFAM: ribonuclease III%3B double-stranded RNA binding domain protein~PRIAM: Ribonuclease III~SMART: ribonuclease III%3B double-stranded RNA binding domain protein~SPTR: Ribonuclease III%3B~TIGRFAM: ribonuclease III~PFAM: Double-stranded RNA binding motif%3B RNase3 domain~TIGRFAM: ribonuclease III%2C bacterial gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1060 Toce_1061 Toce_1061 Toce_1061 1040346 1040606 + Stage V sporulation protein S COGs: COG2359 conserved hypothetical protein~InterPro IPR007347~KEGG: tte:TTE1467 hypothetical protein~PFAM: Stage V sporulation protein S~SPTR: Stage V sporulation protein S%3B~PFAM: Stage V sporulation protein S (SpoVS) gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1061 Toce_1062 Toce_1062 Toce_1062 1040714 1044271 + chromosome segregation protein SMC COGs: COG1196 Chromosome segregation ATPase~InterPro IPR003395:IPR010935:IPR011890~KEGG: cth:Cthe_0927 condensin subunit Smc~PFAM: SMC domain protein%3B SMCs flexible hinge domain protein~SPTR: Condensin subunit Smc%3B~TIGRFAM: chromosome segregation protein SMC~PFAM: RecF/RecN/SMC N terminal domain%3B SMC proteins Flexible Hinge Domain~TIGRFAM: chromosome segregation protein SMC%2C common bacterial type gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1062 Toce_1063 Toce_1063 Toce_1063 1044294 1045190 + signal recognition particle-docking protein FtsY COGs: COG0552 Signal recognition particle GTPase~InterPro IPR003593:IPR013822:IPR000897:IPR004390~KEGG: tit:Thit_1258 signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle~SMART: AAA ATPase~SPTR: Signal recognition particle-docking protein FtsY%3B~TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain~TIGRFAM: signal recognition particle-docking protein FtsY gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1063 Toce_1064 Toce_1064 Toce_1064 1045264 1045623 + putative helix-turn-helix protein YlxM/p13 family protein COGs: COG2739 conserved hypothetical protein~InterPro IPR007394~KEGG: tpd:Teth39_1278 putative DNA-binding protein~PFAM: putative helix-turn-helix protein YlxM/p13 family protein~SPTR: Signal recognition particle associated protein%3B~PFAM: Putative helix-turn-helix protein%2C YlxM / p13 like gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1064 Toce_1065 Toce_1065 Toce_1065 1045625 1046965 + signal recognition particle subunit FFH/SRP54 (srp54) COGs: COG0541 Signal recognition particle GTPase~InterProIPR003593:IPR013822:IPR000897:IPR004125:IPR 004780~KEGG: tex:Teth514_1713 signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle%3B Signal peptide binding (SRP54) M- domain protein~SMART: AAA ATPase~SPTR: Signal recognition particle protein%3B~TIGRFAM: signal recognition particle protein~PFAM: SRP54-type protein%2C GTPase domain%3B SRP54-type protein%2C helical bundle domain%3B Signal peptide binding domain~TIGRFAM: signal recognition particle protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1065 Toce_1066 Toce_1066 Toce_1066 1046980 1047279 + SSU ribosomal protein S16P COGs: COG0228 Ribosomal protein S16~InterPro IPR000307~KEGG: aac:Aaci_1352 ribosomal protein S16~PFAM: ribosomal protein S16~SPTR: Ribosomal protein S16%3B~TIGRFAM: ribosomal protein S16~PFAM: Ribosomal protein S16~TIGRFAM: ribosomal protein S16 gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1066 Toce_1067 Toce_1067 Toce_1067 1047283 1047510 + RNA-binding protein (KH domain) COGs: COG1837 RNA-binding protein (contains KH domain)~InterPro IPR004088:IPR020627~KEGG: nth:Nther_1370 RNA-binding protein (KH domain)~SPTR: RNA-binding protein (KH domain)%3B~PFAM: KH domain gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1067 Toce_1068 Toce_1068 Toce_1068 1047564 1048076 + 16S rRNA processing protein RimM COGs: COG0806 RimM protein required for 16S rRNA processing~InterPro IPR002676:IPR007903:IPR011961~KEGG: cce:Ccel_0712 16S rRNA processing protein RimM~PFAM: PRC-barrel domain protein%3B RimM protein~SPTR: Ribosome maturation factor rimM%3B~TIGRFAM: 16S rRNA processing protein RimM~PFAM: PRC-barrel domain%3B RimM N-terminal domain~TIGRFAM: 16S rRNA processing protein RimM gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1068 Toce_1069 Toce_1069 Toce_1069 1048076 1048819 + tRNA (Guanine37-N(1)-) methyltransferase COGs: COG0336 tRNA-(guanine-N1)-methyltransferase~InterPro IPR016009:IPR002649~KEGG: dth:DICTH_1424 tRNA (guanine-N(1)-)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase~PRIAM: tRNA (guanine-N(1)-)-methyltransferase~SPTR: tRNA (guanine-N(1)-)-methyltransferase%3B~TIGRFAM: tRNA (guanine-N1)-methyltransferase~PFAM: tRNA (Guanine-1)-methyltransferase~TIGRFAM: tRNA (guanine-N1)-methyltransferase gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1069 Toce_1070 Toce_1070 Toce_1070 1048869 1049210 + LSU ribosomal protein L19P COGs: COG0335 Ribosomal protein L19~InterPro IPR001857:IPR018257~KEGG: chy:CHY_1428 50S ribosomal protein L19~PFAM: ribosomal protein L19~SPTR: 50S ribosomal protein L19%3B~TIGRFAM: ribosomal protein L19~PFAM: Ribosomal protein L19~TIGRFAM: ribosomal protein L19%2C bacterial type gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1070 Toce_1071 Toce_1071 Toce_1071 1049250 1050089 + ribosome biogenesis GTP-binding protein YlqF COGs: COG1161 GTPase~InterPro IPR002917:IPR016478:IPR019991~KEGG: tex:Teth514_1707 GTP-binding protein%2C HSR1-related~PFAM: GTP-binding protein HSR1-related~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ribosome biogenesis GTP-binding protein YlqF~PFAM: GTPase of unknown function~TIGRFAM: ribosome biogenesis GTP-binding protein YlqF gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1071 Toce_1072 Toce_1072 Toce_1072 1050058 1050771 + RNase HII COGs: COG0164 Ribonuclease HII~InterPro IPR001352~KEGG: tte:TTE1451 ribonuclease HII~PFAM: ribonuclease HII/HIII~PRIAM: Ribonuclease H~SPTR: Ribonuclease%3B~manually curated~PFAM: Ribonuclease HII gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1072 Toce_1073 Toce_1073 Toce_1073 1050761 1051114 + protein of unknown function UPF0102 COGs: COG0792 endonuclease distantly related to Holliday junction resolvase~InterPro IPR003509~KEGG: gme:Gmet_2864 hypothetical protein~PFAM: protein of unknown function UPF0102~SPTR: UPF0102 protein Gmet_2864%3B~PFAM: Uncharacterised protein family UPF0102~TIGRFAM: conserved hypothetical protein TIGR00252 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1073 Toce_1074 Toce_1074 Toce_1074 1051296 1051987 - pseudogene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1074 Toce_1075 Toce_1075 Toce_1075 1052048 1052449 + hypothetical protein KEGG: smm:Smp_043860 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1075 Toce_1076 Toce_1076 Toce_1076 1052565 1053458 + PpiC-type peptidyl-prolyl cis-trans isomerase COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase~InterPro IPR000297~KEGG: prsA%3B foldase protein PrsA~PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~SPTR: Post-translocation molecular chaperone%3B~PFAM: PPIC-type PPIASE domain gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1076 Toce_1077 Toce_1077 Toce_1077 1053613 1055013 + MATE efflux family protein COGs: COG0534 Na+-driven multidrug efflux pump~InterPro IPR002528~KEGG: bhy:BHWA1_00467 NorM%2C Na+-driven multidrug efflux pump~PFAM: multi antimicrobial extrusion protein MatE~SPTR: Putative uncharacterized protein%3B~TIGRFAM: MATE efflux family protein~PFAM: MatE~TIGRFAM: putative efflux protein%2C MATE family gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1077 Toce_1078 Toce_1078 Toce_1078 1055560 1056198 + methyltransferase cognate corrinoid protein COGs: COG5012 cobalamin binding protein~InterPro IPR003759:IPR006158:IPR012741~KEGG: mta:Moth_1208 5-methyltetrahydrofolate--homocysteine S-methyltransferase~PFAM: cobalamin B12-binding domain protein%3B Methionine synthase B12-binding module cap domain protein~PRIAM: Methionine synthase~SPTR: 5-methyltetrahydrofolate--homocysteine S-methyltransferase%3B~TIGRFAM: methyltransferase cognate corrinoid protein~PFAM: B12 binding domain~TIGRFAM: methyltransferase cognate corrinoid proteins%2C Methanosarcina family gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1078 Toce_1079 Toce_1079 Toce_1079 1056301 1056921 + hypothetical protein KEGG: mta:Moth_1209 methanol:corrinoid methyltransferase~SPTR: Methanol:corrinoid methyltransferase%3B~PFAM: Methanol-cobalamin methyltransferase B subunit gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1079 Toce_1080 Toce_1080 Toce_1080 1056950 1057750 + Methionine synthase COGs: COG1410 Methionine synthase I cobalamin-binding domain~InterPro IPR000489~KEGG: mta:Moth_2115 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase~PFAM: dihydropteroate synthase DHPS~PRIAM: Methionine synthase~SPTR: 5-methyltetrahydrofolate--homocysteine S-methyltransferase%3B~PFAM: Pterin binding enzyme gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1080 Toce_1081 Toce_1081 Toce_1081 1058119 1059684 + methylenetetrahydrofolate reductase COGs: COG0685 5 10-methylenetetrahydrofolate reductase~InterPro IPR003171~KEGG: dhd:Dhaf_0077 methylenetetrahydrofolate reductase~PFAM: methylenetetrahydrofolate reductase~SPTR: Methylenetetrahydrofolate reductase%3B~PFAM: Methylene-tetrahydrofolate reductase C terminal%3B Methylenetetrahydrofolate reductase gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1081 Toce_1082 Toce_1082 Toce_1082 1060055 1061587 + Mg chelatase%2C subunit ChlI COGs: COG0606 ATPase with chaperone activity~InterPro IPR003593:IPR000523:IPR004482~KEGG: cth:Cthe_0455 Mg chelatase%2C subunit ChlI~PFAM: magnesium chelatase ChlI subunit~SMART: AAA ATPase~SPTR: Mg chelatase%2C subunit ChlI%3B~TIGRFAM: Mg chelatase%2C subunit ChlI~PFAM: Magnesium chelatase%2C subunit ChlI~TIGRFAM: Mg chelatase-related protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1082 Toce_1083 Toce_1083 Toce_1083 1061710 1062237 + cob(I)yrinic acid a%2Cc-diamide adenosyltransferase COGs: COG2109 ATP:corrinoid adenosyltransferase~InterPro IPR003724~KEGG: tte:TTE0526 ATP:corrinoid adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~PRIAM: Cob(I)yrinic acid a%2Cc-diamide adenosyltransferase~SPTR: ATP:corrinoid adenosyltransferase%3B~TIGRFAM: cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~TIGRFAM: cob(I)alamin adenosyltransferase gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1083 Toce_1084 Toce_1084 Toce_1084 1062283 1063362 + DNA protecting protein DprA COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake~InterPro IPR000445:IPR003488~KEGG: pth:PTH_1245 Rossmann fold nucleotide-binding protein~PFAM: SMF family protein%3B helix-hairpin-helix motif~SPTR: Predicted Rossmann fold nucleotide-binding protein%3B~TIGRFAM: DNA protecting protein DprA~PFAM: DNA recombination-mediator protein A~TIGRFAM: DNA protecting protein DprA gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1084 Toce_1085 Toce_1085 Toce_1085 1063372 1065456 + DNA topoisomerase I COGs: COG0550 Topoisomerase IA~InterProIPR006154:IPR003601:IPR003602:IPR000380:IPR 006171:IPR013497:IPR013498:IPR005733~KEGG: tte:TTE1449 topoisomerase IA~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain protein%3B DNA topoisomerase type IA zn finger domain protein~PRIAM: DNA topoisomerase~SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain protein~SPTR: DNA topoisomerase%3B~TIGRFAM: DNA topoisomerase I~PFAM: Toprim domain%3B Topoisomerase DNA binding C4 zinc finger%3B DNA topoisomerase~TIGRFAM: DNA topoisomerase I%2C bacterial gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1085 Toce_1086 Toce_1086 Toce_1086 1065461 1066774 + gid protein COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation~InterPro IPR002218:IPR004417~KEGG: adg:Adeg_0573 gid protein~PFAM: glucose-inhibited division protein A~PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing)~SPTR: Gid protein%3B~TIGRFAM: gid protein~PFAM: Glucose inhibited division protein A~TIGRFAM: tRNA:m(5)U-54 methyltransferase gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1086 Toce_1087 Toce_1087 Toce_1087 1066888 1067784 + tyrosine recombinase XerC COGs: COG4974 Site-specific recombinase XerD~InterPro IPR004107:IPR002104:IPR011931:IPR011932~KEGG: bbe:BBR47_34900 probable tyrosine recombinase~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~SPTR: Tyrosine recombinase XerC%3B~TIGRFAM: tyrosine recombinase XerC%3B tyrosine recombinase XerD~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family~TIGRFAM: tyrosine recombinase XerC%3B tyrosine recombinase XerD gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1087 Toce_1088 Toce_1088 Toce_1088 1067801 1068331 + ATP dependent peptidase CodWX%2C CodW component COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit~InterPro IPR001353~KEGG: pth:PTH_1249 ATP-dependent protease peptidase subunit~PFAM: 20S proteasome A and B subunits~SPTR: ATP-dependent protease hslV%3B~PFAM: Proteasome subunit gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1088 Toce_1089 Toce_1089 Toce_1089 1068346 1069755 + heat shock protein HslVU%2C ATPase subunit HslU COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit~InterProIPR003593:IPR001270:IPR013093:IPR019489:IPR 004491~KEGG: pth:PTH_1250 ATP-dependent protease ATP-binding subunit HslU~PFAM: ATPase AAA-2 domain protein%3B Clp ATPase-like~SMART: AAA ATPase~SPTR: ATP-dependent hsl protease ATP-binding subunit hslU%3B~TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1089 Toce_1090 Toce_1090 Toce_1090 1069806 1070591 + GTP-sensing pleiotropic transcriptional repressor CodY COGs: COG4465 Pleiotropic transcriptional repressor~InterPro IPR010312:IPR013198:IPR014154~KEGG: nth:Nther_1386 transcriptional repressor CodY~PFAM: GTP-sensing transcriptional pleiotropic repressor CodY%3B Helix-turn-helix CodY domain protein~SPTR: GTP-sensing pleiotropic transcriptional repressor CodY%3B~TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY~PFAM: CodY helix-turn-helix domain%3B CodY GAF-like domain~TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1090 Toce_1091 Toce_1091 Toce_1091 1070638 1072113 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1091 Toce_1092 Toce_1092 Toce_1092 1072544 1072954 + flagellar basal-body rod protein FlgB COGs: COG1815 Flagellar basal body protein~InterPro IPR001444:IPR006300~KEGG: dsy:DSY2962 hypothetical protein~PFAM: flagellar basal body rod protein~SPTR: Flagellar basal-body rod protein FlgB%3B~TIGRFAM: flagellar basal-body rod protein FlgB~PFAM: Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgB gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1092 Toce_1093 Toce_1093 Toce_1093 1072957 1073400 + flagellar basal-body rod protein FlgC COGs: COG1558 Flagellar basal body rod protein~InterPro IPR001444:IPR010930:IPR019776:IPR006299~KEGG: cth:Cthe_0463 flagellar basal-body rod protein FlgC~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~SPTR: Flagellar basal-body rod protein FlgC%3B~TIGRFAM: flagellar basal-body rod protein FlgC~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgC gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1093 Toce_1094 Toce_1094 Toce_1094 1073416 1073700 + flagellar hook-basal body complex subunit FliE COGs: COG1677 Flagellar hook-basal body protein~InterPro IPR001624~KEGG: pca:Pcar_1193 flagellar hook-basal body complex protein FliE~PFAM: flagellar hook-basal body complex protein FliE~SPTR: Flagellar hook-basal body complex protein FliE%3B~TIGRFAM: flagellar hook-basal body complex subunit FliE~PFAM: Flagellar hook-basal body complex protein FliE~TIGRFAM: flagellar hook-basal body complex protein FliE gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1094 Toce_1095 Toce_1095 Toce_1095 1073721 1075274 + flagellar M-ring protein FliF COGs: COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein~InterPro IPR000067:IPR006182:IPR013556~KEGG: tit:Thit_1236 flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein~SPTR: Flagellar M-ring protein FliF%3B~TIGRFAM: flagellar M-ring protein FliF~PFAM: Secretory protein of YscJ/FliF family%3B Flagellar M-ring protein C-terminal~TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1095 Toce_1096 Toce_1096 Toce_1096 1075286 1076293 + flagellar motor switch protein FliG COGs: COG1536 Flagellar motor switch protein~InterPro IPR000090~KEGG: cth:Cthe_0466 flagellar motor switch protein G~PFAM: flagellar motor switch protein FliG~SPTR: Flagellar motor switch protein FliG%3B~TIGRFAM: flagellar motor switch protein FliG~PFAM: FliG C-terminal domain~TIGRFAM: flagellar motor switch protein FliG gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1096 Toce_1097 Toce_1097 Toce_1097 1076286 1077053 + Flagellar assembly protein FliH/Type III secretion system HrpE COGs: COG1317 Flagellar biosynthesis/type III secretory pathway protein~InterPro IPR018035~KEGG: tte:TTE1440 flagellar biosynthesis/type III secretory pathway protein~PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE~SPTR: Flagellar assembly protein FliH%3B~PFAM: Flagellar assembly protein FliH gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1097 Toce_1098 Toce_1098 Toce_1098 1077046 1078365 + type III secretion system ATPase%2C FliI/YscN COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase~InterProIPR003593:IPR004100:IPR000194:IPR020003:IPR 005714~KEGG: amt:Amet_2722 flagellar protein export ATPase FliI~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase~SPTR: Flagellar protein export ATPase FliI%3B~TIGRFAM: ATPase%2C FliI/YscN family~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATPase FliI/YscN family%3B flagellar protein export ATPase FliI gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1098 Toce_1099 Toce_1099 Toce_1099 1078375 1078833 + flagellar export protein FliJ InterPro IPR012823~KEGG: cth:Cthe_0469 flagellar export protein FliJ~PFAM: flagellar export FliJ family protein~SPTR: Flagellar export protein FliJ%3B~TIGRFAM: flagellar export protein FliJ~PFAM: Flagellar FliJ protein~TIGRFAM: flagellar export protein FliJ gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1099 Toce_1100 Toce_1100 Toce_1100 1078830 1079393 + MgtE intracellular region InterPro IPR006668~KEGG: tte:TTE1437 hypothetical protein~PFAM: MgtE intracellular region~SPTR: Putative uncharacterized protein%3B~PFAM: MgtE intracellular N domain gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1100 Toce_1101 Toce_1101 Toce_1101 1079428 1080651 + Flagellar hook-length control protein-like%2C C-terminal domain protein InterPro IPR021136~KEGG: amt:Amet_2719 flagellar hook-length control protein~PFAM: Flagellar hook-length control protein-like%2C C-terminal domain~SPTR: Flagellar hook-length control protein%3B~PFAM: Flagellar hook-length control protein FliK gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1101 Toce_1102 Toce_1102 Toce_1102 1080667 1081056 + flagellar hook capping protein COGs: COG1843 Flagellar hook capping protein~InterPro IPR005648~KEGG: tpd:Teth39_1250 flagellar hook capping protein~PFAM: flagellar hook capping protein~SPTR: Flagellar hook capping protein%3B~PFAM: Flagellar hook capping protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1102 Toce_1103 Toce_1103 Toce_1103 1081081 1081470 + flagellar operon protein InterPro IPR013367~KEGG: cth:Cthe_0473 flagellar operon protein~SPTR: Flagellar operon protein%3B~TIGRFAM: flagellar operon protein~PFAM: Protein of unknown function (DUF3766)~TIGRFAM: flagellar operon protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1103 Toce_1104 Toce_1104 Toce_1104 1081560 1082774 + fagellar hook-basal body protein COGs: COG1749 Flagellar hook protein FlgE~InterPro IPR001444:IPR011491:IPR010930:IPR020013~KEGG: hmo:HM1_2230 flagellar hook protein~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body FlaE domain protein%3B flagellar basal body rod protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: fagellar hook-basal body protein~PFAM: Flagella basal body rod protein%3B Domain of unknown function (DUF1078)%3B Flagellar basal body protein FlaE~TIGRFAM: flagellar basal-body rod protein FlgB%3B fagellar hook-basal body proteins gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1104 Toce_1105 Toce_1105 Toce_1105 1082827 1083021 + flagellar FlbD family protein COGs: COG1582 Uncharacterized protein possibly involved in motility~InterPro IPR009384~KEGG: tnp:Tnap_0471 flagellar FlbD family protein~PFAM: flagellar FlbD family protein~SPTR: Flagellar FlbD family protein%3B~PFAM: Flagellar protein (FlbD) gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1105 Toce_1106 Toce_1106 Toce_1106 1083021 1083827 + MotA/TolQ/ExbB proton channel COGs: COG1291 Flagellar motor component~InterPro IPR002898:IPR000540~KEGG: nth:Nther_1402 MotA/TolQ/ExbB proton channel~PFAM: MotA/TolQ/ExbB proton channel~SPTR: MotA/TolQ/ExbB proton channel%3B~PFAM: MotA/TolQ/ExbB proton channel family gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1106 Toce_1107 Toce_1107 Toce_1107 1083814 1084560 + OmpA/MotB domain protein COGs: COG1360 Flagellar motor protein~InterPro IPR006664:IPR006665~KEGG: aoe:Clos_1491 OmpA/MotB domain-containing protein~PFAM: OmpA/MotB domain protein~SPTR: OmpA/MotB domain protein%3B~PFAM: OmpA family gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1107 Toce_1108 Toce_1108 Toce_1108 1084557 1085024 + flagellar basal body-associated protein FliL COGs: COG1580 Flagellar basal body-associated protein~InterPro IPR005503~KEGG: nth:Nther_1404 flagellar basal body-associated protein FliL~PFAM: flagellar basal body-associated protein FliL~SPTR: Flagellar basal body-associated protein FliL%3B~PFAM: Flagellar basal body-associated protein FliL gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1108 Toce_1109 Toce_1109 Toce_1109 1085042 1086037 + flagellar motor switch protein FliM COGs: COG1868 Flagellar motor switch protein~InterPro IPR001689:IPR001543~KEGG: csc:Csac_1269 flagellar motor switch protein FliM~PFAM: flagellar motor switch protein FliM%3B surface presentation of antigens (SPOA) protein~SPTR: Flagellar motor switch protein FliM%3B~TIGRFAM: flagellar motor switch protein FliM~PFAM: Surface presentation of antigens (SPOA)%3B Flagellar motor switch protein FliM~TIGRFAM: flagellar motor switch protein FliM gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1109 Toce_1110 Toce_1110 Toce_1110 1086030 1087118 + CheC%2C inhibitor of MCP methylation / FliN fusion protein COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation~InterPro IPR001172:IPR007597:IPR001543:IPR012826~KEGG: tte:TTE1429 flagellar motor switch protein~PFAM: surface presentation of antigens (SPOA) protein%3B CheC domain protein~SPTR: Chemotaxis protein CheC%2C inhibitor of MCP methylation%3B~TIGRFAM: flagellar motor switch protein FliN~PFAM: Surface presentation of antigens (SPOA)%3B CheC-like family~TIGRFAM: flagellar motor switch protein FliN gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1110 Toce_1111 Toce_1111 Toce_1111 1087137 1087496 + response regulator receiver protein COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterPro IPR001789~KEGG: hmo:HM1_2237 response regulator receiver domain~PFAM: response regulator receiver~SMART: response regulator receiver~SPTR: Response regulator receiver domain%3B~PFAM: Response regulator receiver domain gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1111 Toce_1112 Toce_1112 Toce_1112 1087510 1088061 + hypothetical protein InterPro IPR008162~KEGG: cce:Ccel_2036 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1112 Toce_1113 Toce_1113 Toce_1113 1088058 1088822 + flagellar biosynthetic protein FliP COGs: COG1338 Flagellar biosynthesis pathway component FliP~InterPro IPR005838:IPR005837~KEGG: drm:Dred_2396 flagellar biosynthesis protein FliP~PFAM: type III secretion system inner membrane P protein~SPTR: Flagellar biosynthetic protein FliP%3B~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: FliP family~TIGRFAM: flagellar biosynthetic protein FliP gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1113 Toce_1114 Toce_1114 Toce_1114 1088847 1089116 + flagellar biosynthetic protein FliQ COGs: COG1987 Flagellar biosynthesis pathway component FliQ~InterPro IPR002191:IPR006305~KEGG: drm:Dred_2395 flagellar biosynthetic protein FliQ~PFAM: export protein FliQ family 3~SPTR: Flagellar biosynthetic protein FliQ%3B~TIGRFAM: flagellar biosynthetic protein FliQ~PFAM: Bacterial export proteins%2C family 3~TIGRFAM: flagellar biosynthetic protein FliQ gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1114 Toce_1115 Toce_1115 Toce_1115 1089133 1089897 + flagellar biosynthetic protein FliR COGs: COG1684 Flagellar biosynthesis pathway component FliR~InterPro IPR002010:IPR006303~KEGG: tit:Thit_1217 flagellar biosynthetic protein FliR~PFAM: type III secretion system inner membrane R protein~SPTR: Flagellar biosynthetic protein fliR%3B~TIGRFAM: flagellar biosynthetic protein FliR~PFAM: Bacterial export proteins%2C family 1~TIGRFAM: flagellar biosynthetic protein FliR gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1115 Toce_1116 Toce_1116 Toce_1116 1089894 1090967 + flagellar biosynthetic protein FlhB COGs: COG1377 Flagellar biosynthesis pathway component FlhB~InterPro IPR006135:IPR006136~KEGG: tte:TTE1423 flagellar biosynthesis/type III secretory pathway protein~PFAM: type III secretion exporter~SPTR: Flagellar biosynthesis/type III secretory pathway protein%3B~TIGRFAM: flagellar biosynthetic protein FlhB~PFAM: FlhB HrpN YscU SpaS Family~TIGRFAM: flagellar biosynthetic protein FlhB%3B flhB C-terminus-related protein gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1116 Toce_1117 Toce_1117 Toce_1117 1090971 1093001 + flagellar biosynthesis protein FlhA COGs: COG1298 Flagellar biosynthesis pathway component FlhA~InterPro IPR001712:IPR006301~KEGG: cth:Cthe_0485 flagellar biosynthesis protein FlhA~PFAM: type III secretion FHIPEP protein~SPTR: Flagellar biosynthesis protein FlhA%3B~TIGRFAM: flagellar biosynthesis protein FlhA~PFAM: FHIPEP family~TIGRFAM: flagellar biosynthesis protein FlhA gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1117 Toce_1118 Toce_1118 Toce_1118 1093002 1094126 + flagellar biosynthetic protein FlhF COGs: COG1419 Flagellar GTP-binding protein~InterPro IPR003593:IPR000897:IPR020006~KEGG: amt:Amet_2702 GTP-binding signal recognition particle~PFAM: GTP-binding signal recognition particle SRP54 G- domain~SMART: AAA ATPase~SPTR: GTP-binding signal recognition particle SRP54 G-domain protein%3B~TIGRFAM: flagellar biosynthetic protein FlhF~PFAM: SRP54-type protein%2C GTPase domain~TIGRFAM: flagellar biosynthetic protein FlhF gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1118 Toce_1119 Toce_1119 Toce_1119 1094123 1094995 + cobyrinic acid ac-diamide synthase COGs: COG0455 ATPase involved in chromosome partitioning~KEGG: aoe:Clos_1503 cobyrinic acid ac-diamide synthase~SPTR: Cobyrinic acid ac-diamide synthase%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1119 Toce_1120 Toce_1120 Toce_1120 1095017 1095655 + type IV pilus assembly PilZ COGs: COG5581 glycosyltransferase~InterPro IPR009875~KEGG: nth:Nther_1416 type IV pilus assembly PilZ~PFAM: type IV pilus assembly PilZ~SPTR: Type IV pilus assembly PilZ%3B~PFAM: PilZ domain gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1120 Toce_1121 Toce_1121 Toce_1121 1095689 1097656 + CheA signal transduction histidine kinase COGs: COG0643 Chemotaxis protein histidine kinase and related kinase~InterProIPR008207:IPR003594:IPR002545:IPR004358:IPR 010808:IPR004105:IPR005467~KEGG: tpd:Teth39_1232 CheA signal transduction histidine kinase~PFAM: CheW domain protein%3B P2 response regulator binding domain protein%3B Hpt domain protein%3B Signal transducing histidine kinase homodimeric%3B ATP-binding region ATPase domain protein~SMART: CheW domain protein%3B Hpt domain protein%3B ATP-binding region ATPase domain protein~SPTR: CheA signal transduction histidine kinase%3B~PFAM: CheW-like domain%3B P2 response regulator binding domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B Signal transducing histidine kinase%2C homodimeric domain%3B Hpt domain gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1121 Toce_1122 Toce_1122 Toce_1122 1097671 1098123 + CheW protein COGs: COG0835 Chemotaxis signal transduction protein~InterPro IPR002545~KEGG: nth:Nther_1419 CheW protein~PFAM: CheW domain protein~SMART: CheW domain protein~SPTR: CheW protein%3B~PFAM: CheW-like domain gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1122 Toce_1123 Toce_1123 Toce_1123 1098136 1098774 + CheC%2C inhibitor of MCP methylation COGs: COG1776 Chemotaxis protein CheC inhibitor of MCP methylation~InterPro IPR007597~KEGG: amt:Amet_2696 CheC%2C inhibitor of MCP methylation~PFAM: CheC domain protein~SPTR: CheC%2C inhibitor of MCP methylation%3B~PFAM: CheC-like family gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1123 Toce_1124 Toce_1124 Toce_1124 1098740 1099225 + CheD COGs: COG1871 Chemotaxis protein%3B stimulates methylation of MCP protein~InterPro IPR005659~KEGG: tte:TTE1414 chemoreceptor glutamine deamidase CheD~PFAM: CheD family protein~PRIAM: Protein-glutamine glutaminase~SPTR: Probable chemoreceptor glutamine deamidase cheD%3B~PFAM: CheD gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1124 Toce_1125 Toce_1125 Toce_1125 1099241 1099978 + RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG subfamily COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterProIPR000943:IPR007627:IPR007630:IPR014284:IPR 012845~KEGG: hmo:HM1_2251 RNA polymerase sigma factor%2C FliA/whig family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1125 Toce_1126 Toce_1126 Toce_1126 1099995 1101434 + protein of unknown function DUF342 COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain~InterPro IPR005646~KEGG: cth:Cthe_0498 hypothetical protein~PFAM: protein of unknown function DUF342~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF342) gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1126 Toce_1127 Toce_1127 Toce_1127 1101445 1101714 + conserved hypothetical protein KEGG: hmo:HM1_2253 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1127 Toce_1128 Toce_1128 Toce_1128 1101845 1103320 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1128 Toce_1129 Toce_1129 Toce_1129 1103474 1103926 + transcriptional regulator%2C BadM/Rrf2 family COGs: COG1959 transcriptional regulator protein~InterPro IPR000944~KEGG: aoe:Clos_1671 BadM/Rrf2 family transcriptional regulator~PFAM: protein of unknown function UPF0074~SPTR: Transcriptional regulator%2C BadM/Rrf2 family%3B~TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: Transcriptional regulator~TIGRFAM: rrf2 family protein (putative transcriptional regulator) gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1129 Toce_1130 Toce_1130 Toce_1130 1103953 1105128 + cysteine desulfurase NifS COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase~InterProIPR000192:IPR016454:IPR020578:IPR017772:IPR 010240~KEGG: chy:CHY_2199 cysteine desulfurase~PFAM: aminotransferase class V~PRIAM: Cysteine desulfurase~SPTR: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes%3B~TIGRFAM: cysteine desulfurase NifS~PFAM: Aminotransferase class-V~TIGRFAM: cysteine desulfurase NifS gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1130 Toce_1131 Toce_1131 Toce_1131 1105135 1105527 + FeS cluster assembly scaffold protein NifU COGs: COG0822 NifU homolog involved in Fe-S cluster formation~InterPro IPR002871:IPR017787~KEGG: chy:CHY_2198 putative FeS assembly protein~PFAM: nitrogen-fixing NifU domain protein~SPTR: Putative FeS assembly protein%3B~TIGRFAM: FeS cluster assembly scaffold protein NifU~PFAM: NifU-like N terminal domain~TIGRFAM: FeS cluster assembly scaffold IscU%3B FeS cluster assembly scaffold protein NifU%2C Clostridium type gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1131 Toce_1132 Toce_1132 Toce_1132 1105508 1106602 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain~InterPro IPR004506~KEGG: tte:TTE2464 tRNA-specific 2-thiouridylase MnmA~SPTR: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase%3B~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~PFAM: tRNA methyl transferase~TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1132 Toce_1133 Toce_1133 Toce_1133 1106678 1106848 + conserved hypothetical protein KEGG: chy:CHY_0535 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1133 Toce_1134 Toce_1134 Toce_1134 1107109 1109049 + NADH:flavin oxidoreductase/NADH oxidase COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family~InterPro IPR013027:IPR000103:IPR001155~KEGG: tte:TTE2131 NADH:flavin oxidoreductase~PFAM: NADH:flavin oxidoreductase/NADH oxidase%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: NADH:flavin oxidoreductases%2C Old Yellow Enzyme family%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B NADH:flavin oxidoreductase / NADH oxidase family gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1134 Toce_1135 Toce_1135 Toce_1135 1109290 1109463 + conserved hypothetical protein KEGG: cab:CAB202 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1135 Toce_1136 Toce_1136 Toce_1136 1109470 1110519 + protein of unknown function UPF0118 COGs: COG0628 permease~InterPro IPR002549~KEGG: amt:Amet_2457 hypothetical protein~PFAM: protein of unknown function UPF0118~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function DUF20 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1136 Toce_1137 Toce_1137 Toce_1137 1110921 1112249 + diaminopimelate decarboxylase COGs: COG0019 Diaminopimelate decarboxylase~InterPro IPR002986:IPR000183~KEGG: tpd:Teth39_0559 diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~SPTR: Diaminopimelate decarboxylase%3B~TIGRFAM: diaminopimelate decarboxylase~PFAM: Pyridoxal-dependent decarboxylase%2C C-terminal sheet domain%3B Pyridoxal-dependent decarboxylase%2C pyridoxal binding domain~TIGRFAM: diaminopimelate decarboxylase gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1137 Toce_1138 Toce_1138 Toce_1138 1112336 1112950 + peptidase M50 COGs: COG1994 Zn-dependent protease~InterPro IPR008915~KEGG: tpd:Teth39_1128 peptidase M50~PFAM: peptidase M50~SPTR: Peptidase M50%3B~PFAM: Peptidase family M50 gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1138 Toce_1139 Toce_1139 Toce_1139 1112973 1113719 + chromosome segregation and condensation protein ScpA COGs: COG1354 conserved hypothetical protein~InterPro IPR003768~KEGG: amt:Amet_2531 chromosome segregation and condensation protein ScpA~PFAM: chromosome segregation and condensation protein ScpA~SPTR: Chromosome segregation and condensation protein ScpA%3B~PFAM: ScpA/B protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1139 Toce_1140 Toce_1140 Toce_1140 1113719 1114237 + chromosome segregation and condensation protein%2C ScpB COGs: COG1386 transcriptional regulator protein containing the HTH domain~InterPro IPR005234~KEGG: cbi:CLJ_B2029 segregation and condensation protein B~PFAM: chromosome segregation and condensation protein ScpB~SPTR: Segregation and condensation protein B%3B~TIGRFAM: segregation and condensation protein B~PFAM: Putative transcriptional regulators (Ypuh-like)~TIGRFAM: segregation and condensation protein B gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1140 Toce_1141 Toce_1141 Toce_1141 1114248 1114541 + hypothetical protein KEGG: plu:plu1652 hypothetical protein~SPTR: Similar to unknown protein of Photorhabdus gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1141 Toce_1142 Toce_1142 Toce_1142 1114788 1115207 + sporulation protein YtfJ COGs: COG3874 conserved hypothetical protein~InterPro IPR014229~KEGG: tte:TTE1327 hypothetical protein~PFAM: Sporulation protein YtfJ~SPTR: Sporulation protein YtfJ%3B~TIGRFAM: sporulation protein YtfJ~PFAM: Sporulation protein YtfJ (Spore_YtfJ)~TIGRFAM: sporulation protein YtfJ gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1142 Toce_1143 Toce_1143 Toce_1143 1115277 1115681 + conserved hypothetical protein KEGG: aoe:Clos_1581 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1143 Toce_1144 Toce_1144 Toce_1144 1115763 1116896 + Serine-type D-Ala-D-Ala carboxypeptidase COGs: COG1686 D-alanyl-D-alanine carboxypeptidase~InterPro IPR018044:IPR001967:IPR012907~KEGG: tte:TTE1328 D-alanyl-D-alanine carboxypeptidase~PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1%3B Penicillin-binding protein 5 domain protein~PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase~SPTR: D-alanyl-D-alanine carboxypeptidase%3B~PFAM: D-alanyl-D-alanine carboxypeptidase%3B Penicillin-binding protein 5%2C C-terminal domain gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1144 Toce_1145 Toce_1145 Toce_1145 1117116 1118399 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase~InterPro IPR001327~KEGG: hmo:HM1_2741 glucose inhibited division protein A~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: Glucose inhibited division protein a%3B~PFAM: Glucose inhibited division protein A gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1145 Toce_1146 Toce_1146 Toce_1146 1118612 1119577 + conserved hypothetical protein COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase~InterPro IPR006058~KEGG: tex:Teth514_1576 hypothetical protein~SPTR: Oxidoreductase FAD-binding domain protein gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1146 Toce_1147 Toce_1147 Toce_1147 1119570 1120868 + glucose-inhibited division protein A InterPro IPR002218~KEGG: tpd:Teth39_1140 glucose-inhibited division protein A~PFAM: glucose-inhibited division protein A~SPTR: Glucose-inhibited division protein A%3B~PFAM: Glucose inhibited division protein A gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1147 Toce_1148 Toce_1148 Toce_1148 1120914 1121627 + ribosomal large subunit pseudouridine synthase B COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase~InterPro IPR002942:IPR006145:IPR018496:IPR000748~KEGG: tte:TTE1332 16S rRNA uridine-516 pseudouridylate synthase family protein~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Pseudouridine synthase%3B~PFAM: RNA pseudouridylate synthase%3B S4 domain~TIGRFAM: pseudouridine synthase family gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1148 Toce_1149 Toce_1149 Toce_1149 1122013 1122840 + spermidine synthase COGs: COG0421 Spermidine synthase~InterPro IPR001045~KEGG: pth:PTH_0945 spermidine synthase~PFAM: Spermine synthase~SPTR: Spermidine synthase%3B~TIGRFAM: spermidine synthase~PFAM: Spermine/spermidine synthase~TIGRFAM: spermidine synthase gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1149 Toce_1150 Toce_1150 Toce_1150 1122854 1123717 + agmatinase COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family~InterPro IPR006035:IPR020855:IPR005925~KEGG: tle:Tlet_1302 putative agmatinase~PFAM: Arginase/agmatinase/formiminoglutamase~SPTR: Putative agmatinase%3B~TIGRFAM: agmatinase~PFAM: Arginase family~TIGRFAM: agmatinase gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1150 Toce_1151 Toce_1151 Toce_1151 1123734 1124981 + ABC transporter related protein COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components~InterPro IPR003593:IPR020322:IPR003439:IPR017871~KEGG: hor:Hore_00190 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1151 Toce_1152 Toce_1152 Toce_1152 1124999 1125460 + conserved hypothetical protein KEGG: drm:Dred_1144 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1152 Toce_1153 Toce_1153 Toce_1153 1125481 1126728 + HI0933 family protein COGs: COG2081 flavoprotein~InterPro IPR013027:IPR004792~KEGG: cth:Cthe_0708 FAD dependent oxidoreductase~PFAM: HI0933 family protein~SPTR: FAD dependent oxidoreductase%3B~PFAM: HI0933-like protein~TIGRFAM: conserved hypothetical protein TIGR00275 gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1153 Toce_1154 Toce_1154 Toce_1154 1126700 1127743 + cytidylate kinase COGs: COG0283 Cytidylate kinase~InterPro IPR008243:IPR000623:IPR011994:IPR003136~KEGG: tit:Thit_1145 cytidylate kinase~PFAM: cytidylate kinase region%3B Chorismate mutase of the AroH class%3B shikimate kinase~SPTR: Cytidylate kinase%3B~TIGRFAM: cytidylate kinase%3B chorismate mutase~PFAM: Cytidylate kinase%3B Chorismate mutase type I~TIGRFAM: cytidylate kinase%3B monofunctional chorismate mutase%2C gram positive type%2C clade 1 gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1154 Toce_1155 Toce_1155 Toce_1155 1127733 1128317 + 1-acyl-sn-glycerol-3-phosphate acyltransferase COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase~InterPro IPR002123:IPR004552~KEGG: tit:Thit_1146 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase%3B~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: Acyltransferase~TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1155 Toce_1156 Toce_1156 Toce_1156 1128402 1130420 + hydroxymethylbutenyl pyrophosphate reductase COGs: COG0539 Ribosomal protein S1~InterPro IPR000110:IPR003451:IPR003029~KEGG: pth:PTH_1619 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein~PFAM: LytB protein%3B RNA binding S1 domain protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~PFAM: S1 RNA binding domain%3B LytB protein~TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)%3B ribosomal protein S1 gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1156 Toce_1157 Toce_1157 Toce_1157 1130473 1131522 + isopentenyl-diphosphate delta-isomerase%2C type 2 COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase~InterPro IPR002932:IPR011179:IPR018212~KEGG: nth:Nther_1637 isopentenyl pyrophosphate isomerase~PFAM: ferredoxin-dependent glutamate synthase~PRIAM: Isopentenyl-diphosphate Delta-isomerase~SPTR: Isopentenyl-diphosphate delta-isomerase%2C type 2%3B~TIGRFAM: isopentenyl-diphosphate delta-isomerase%2C type 2~PFAM: FMN-dependent dehydrogenase~TIGRFAM: isopentenyl-diphosphate delta-isomerase%2C type 2 gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1157 Toce_1158 Toce_1158 Toce_1158 1131641 1132015 + adenosylmethionine decarboxylase proenzyme COGs: COG1586 S-adenosylmethionine decarboxylase~InterPro IPR003826:IPR017716~KEGG: cth:Cthe_0715 S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase related~SPTR: S-adenosylmethionine decarboxylase proenzyme%3B~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme%2C Bacillus form gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1158 Toce_1159 Toce_1159 Toce_1159 1132287 1133060 + MCP methyltransferase%2C CheR-type COGs: COG1352 Methylase of chemotaxis methyl-accepting protein~InterPro IPR000780~KEGG: amt:Amet_2623 protein-glutamate O-methyltransferase~PFAM: MCP methyltransferase CheR-type~PRIAM: Protein-glutamate O-methyltransferase~SMART: MCP methyltransferase CheR-type~SPTR: Protein-glutamate O-methyltransferase%3B~PFAM: CheR methyltransferase%2C SAM binding domain%3B CheR methyltransferase%2C all-alpha domain gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1159 Toce_1160 Toce_1160 Toce_1160 1133381 1134135 + pseudogene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1160 Toce_1161 Toce_1161 Toce_1161 1134206 1134580 + pseudogene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1161 Toce_1162 Toce_1162 Toce_1162 1135292 1135537 + pseudogene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1162 Toce_1163 Toce_1163 Toce_1163 1136093 1136626 - transposase mutator type COGs: COG3328 Transposase and inactivated derivatives~InterPro IPR001207~KEGG: csc:Csac_0849 transposase%2C mutator type~PFAM: transposase mutator type~SPTR: Putative uncharacterized protein Tnp3_JF8%3B~PFAM: Transposase%2C Mutator family gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1163 Toce_1164 Toce_1164 Toce_1164 1136940 1137989 + peptidase M42 family protein COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: tte:TTE0441 cellulase M-like protein~PFAM: peptidase M42 family protein~SPTR: Cellulase%3B~PFAM: M42 glutamyl aminopeptidase gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1164 Toce_1165 Toce_1165 Toce_1165 1137980 1138993 + peptidase M42 family protein COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: tpd:Teth39_1849 peptidase M42 family protein~PFAM: peptidase M42 family protein~SPTR: Peptidase M42 family protein%3B~PFAM: M42 glutamyl aminopeptidase gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1165 Toce_1166 Toce_1166 Toce_1166 1138990 1139973 + Cellulase COGs: COG1363 Cellulase M and related protein~InterPro IPR008007~KEGG: aoe:Clos_1557 peptidase M42 family protein~PFAM: peptidase M42 family protein~PRIAM: Cellulase~SPTR: Peptidase M42 family protein%3B~PFAM: M42 glutamyl aminopeptidase gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1166 Toce_1167 Toce_1167 Toce_1167 1140086 1140397 + hypothetical protein KEGG: bfu:BC1G_04623 hypothetical protein~SPTR: Predicted protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1167 Toce_1168 Toce_1168 Toce_1168 1140513 1141676 + TPR repeat-containing protein COGs: COG3063 Tfp pilus assembly protein PilF~InterPro IPR019734:IPR001440:IPR013026~KEGG: mth:MTH72 O-linked GlcNAc transferase~PFAM: TPR repeat-containing protein~SPTR: O-linked GlcNAc transferase%3B~PFAM: Coatomer epsilon subunit%3B Tetratricopeptide repeat gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1168 Toce_1169 Toce_1169 Toce_1169 1141693 1142454 + 5'-nucleotidase %3Bexopolyphosphatase %3B3'-nucleotidase COGs: COG0496 acid phosphatase~InterPro IPR002828~KEGG: hmo:HM1_2558 acid phosphatase SurE~PFAM: Survival protein SurE~SPTR: Stationary-phase survival protein SurE%3B~TIGRFAM: stationary-phase survival protein SurE~manually curated~PFAM: Survival protein SurE~TIGRFAM: 5'/3'-nucleotidase SurE gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1169 Toce_1170 Toce_1170 Toce_1170 1142478 1142639 + conserved hypothetical protein KEGG: cth:Cthe_0705 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1170 Toce_1171 Toce_1171 Toce_1171 1142705 1143817 + ATPase KEGG: cth:Cthe_0434 ATPase~SPTR: ATPase gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1171 Toce_1172 Toce_1172 Toce_1172 1143919 1144647 + hypothetical protein KEGG: mta:Moth_2110 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1172 Toce_1173 Toce_1173 Toce_1173 1144691 1145890 + aminotransferase class I and II COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR001176:IPR004839:IPR004838~KEGG: ckr:CKR_1346 hypothetical protein~PFAM: aminotransferase class I and II~SPTR: Aminotransferase class I and II%3B~PFAM: Aminotransferase class I and II gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1173 Toce_1174 Toce_1174 Toce_1174 1145939 1147366 + adenylosuccinate lyase COGs: COG0015 Adenylosuccinate lyase~InterPro IPR000362:IPR019468:IPR020557:IPR004769~KEGG: tte:TTE1367 adenylosuccinate lyase~PFAM: fumarate lyase%3B Adenylosuccinate lyase-like~SPTR: Adenylosuccinate lyase%3B~TIGRFAM: adenylosuccinate lyase~PFAM: Lyase%3B Adenylosuccinate lyase C-terminus~TIGRFAM: adenylosuccinate lyase gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1174 Toce_1175 Toce_1175 Toce_1175 1147454 1147699 + hypothetical protein KEGG: hma:rrnAC2001 hypothetical protein~SPTR: DNA topoisomerase gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1175 Toce_1176 Toce_1176 Toce_1176 1147815 1148024 + regulatory protein%2C FmdB family InterPro IPR013429~KEGG: mta:Moth_2262 hypothetical protein~PFAM: Putative regulatory protein FmdB~SPTR: Putative uncharacterized protein%3B~TIGRFAM: regulatory protein%2C FmdB family~PFAM: Zinc ribbon domain~TIGRFAM: putative regulatory protein%2C FmdB family gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1176 Toce_1177 Toce_1177 Toce_1177 1148125 1148289 + conserved hypothetical protein KEGG: dau:Daud_0531 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1177 Toce_1178 Toce_1178 Toce_1178 1148396 1149532 + conserved hypothetical protein COGs: COG2006 conserved hypothetical protein~InterPro IPR017900:IPR017896~KEGG: csc:Csac_1294 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF362) gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1178 Toce_1179 Toce_1179 Toce_1179 1149825 1151090 + Integrase catalytic region InterPro IPR001584~KEGG: adg:Adeg_0459 integrase catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1179 Toce_1180 Toce_1180 Toce_1180 1151208 1151360 - hypothetical protein gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1180 Toce_1181 Toce_1181 Toce_1181 1151651 1152256 + SOS-response transcriptional repressor%2C LexA COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase)~InterPro IPR006197:IPR006199:IPR019759:IPR006200~KEGG: csc:Csac_2042 LexA repressor~PFAM: LexA DNA-binding domain protein%3B Peptidase S24/S26A/S26B%2C conserved region~SPTR: LexA repressor%3B~TIGRFAM: LexA repressor~PFAM: LexA DNA binding domain%3B Peptidase S24-like~TIGRFAM: SOS regulatory protein LexA gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1181 Toce_1182 Toce_1182 Toce_1182 1152258 1153544 - Aluminum resistance family protein COGs: COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance~InterPro IPR009651~KEGG: cth:Cthe_0794 aluminium resistance protein~PFAM: Aluminium resistance family protein~SPTR: Aluminium resistance family protein%3B~PFAM: Aluminium resistance protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1182 Toce_1183 Toce_1183 Toce_1183 1153776 1154381 - conserved hypothetical protein KEGG: hor:Hore_11590 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1183 Toce_1184 Toce_1184 Toce_1184 1154362 1154883 - GTP-binding protein HSR1-related protein InterPro IPR002917~KEGG: amt:Amet_2539 GTP-binding protein%2C HSR1-related~PFAM: GTP-binding protein HSR1-related~SPTR: GTP-binding protein%2C HSR1-related%3B~PFAM: GTPase of unknown function gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1184 Toce_1185 Toce_1185 Toce_1185 1155014 1155997 - stage V sporulation protein K COGs: COG0464 ATPase of the AAA+ class~InterPro IPR003593:IPR000641:IPR003959:IPR014232~KEGG: drm:Dred_1880 ATPase central domain-containing protein~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~SPTR: AAA ATPase%2C central domain protein%3B~TIGRFAM: stage V sporulation protein K~PFAM: ATPase family associated with various cellular activities (AAA)~TIGRFAM: probable Rubsico expression protein CbbX%3B stage V sporulation protein K gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1185 Toce_1186 Toce_1186 Toce_1186 1156090 1156347 - RNA-binding protein Hfq COGs: COG1923 Uncharacterized host factor I protein~InterPro IPR001163:IPR005001~KEGG: pth:PTH_1345 hypothetical protein~PFAM: Like-Sm ribonucleoprotein core~SPTR: Protein hfq%3B~TIGRFAM: RNA chaperone Hfq~PFAM: LSM domain~TIGRFAM: RNA chaperone Hfq gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1186 Toce_1187 Toce_1187 Toce_1187 1156388 1157332 - tRNA delta(2)-isopentenylpyrophosphate transferase COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase~InterPro IPR002627:IPR018022~KEGG: cth:Cthe_0775 tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase~PRIAM: tRNA isopentenyltransferase~SPTR: tRNA Delta(2)-isopentenylpyrophosphate transferase%3B~TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: IPP transferase~TIGRFAM: tRNA isopentenyltransferase (miaA) gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1187 Toce_1188 Toce_1188 Toce_1188 1157325 1159106 - DNA mismatch repair protein MutL COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase)~InterProIPR003594:IPR013507:IPR014790:IPR014762:IPR 014763:IPR020667~KEGG: tpd:Teth39_1175 DNA mismatch repair protein~PFAM: MutL dimerisation%3B DNA mismatch repair protein domain protein%3B ATP-binding region ATPase domain protein~SPTR: DNA mismatch repair protein MutL%3B~TIGRFAM: DNA mismatch repair protein MutL~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B MutL C terminal dimerisation domain%3B DNA mismatch repair protein%2C C-terminal domain~TIGRFAM: DNA mismatch repair protein MutL gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1188 Toce_1189 Toce_1189 Toce_1189 1159119 1161710 - DNA mismatch repair protein MutS COGs: COG0249 Mismatch repair ATPase (MutS family)~InterProIPR007696:IPR000432:IPR007695:IPR007860:IPR 007861:IPR005748~KEGG: cth:Cthe_0777 DNA mismatch repair protein MutS~PFAM: MutS III domain protein%3B DNA mismatch repair protein MutS domain protein%3B MutS II domain protein%3B MutS IV domain protein~SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein~SPTR: DNA mismatch repair protein MutS%3B~TIGRFAM: DNA mismatch repair protein MutS~PFAM: MutS family domain IV%3B MutS domain II%3B MutS domain V%3B MutS domain I%3B MutS domain III~TIGRFAM: DNA mismatch repair protein MutS gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1189 Toce_1190 Toce_1190 Toce_1190 1161739 1163058 - tRNA-i(6)A37 thiotransferase enzyme MiaB COGs: COG0621 2-methylthioadenine synthetase~InterProIPR006638:IPR013848:IPR007197:IPR002792:IPR 020612:IPR005839:IPR006463~KEGG: tte:TTE1356 2-methylthioadenine synthetase~PFAM: Radical SAM domain protein%3B Protein of unknown function UPF0004 %3B deoxyribonuclease/rho motif-related TRAM~SMART: Elongator protein 3/MiaB/NifB~SPTR: tRNA-i(6)A37 thiotransferase enzyme MiaB%3B~TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB%3B RNA modification enzyme%2C MiaB family~PFAM: TRAM domain%3B Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB%3B RNA modification enzyme%2C MiaB family gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1190 Toce_1191 Toce_1191 Toce_1191 1163145 1163903 - phage SPO1 DNA polymerase-related protein COGs: COG1573 Uracil-DNA glycosylase~InterPro IPR005122:IPR005273~KEGG: aco:Amico_0876 phage SPO1 DNA polymerase-related protein~PFAM: Uracil-DNA glycosylase superfamily~SPTR: Uracil-DNA glycosylase%3B~TIGRFAM: phage SPO1 DNA polymerase-related protein~PFAM: Uracil DNA glycosylase superfamily~TIGRFAM: uracil-DNA glycosylase%2C family 4 gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1191 Toce_1192 Toce_1192 Toce_1192 1163997 1165418 - VanW family protein COGs: COG2720 Uncharacterized vancomycin resistance protein~InterPro IPR007391:IPR011098~KEGG: dau:Daud_0917 VanW family protein~PFAM: VanW family protein%3B G5 domain protein~SPTR: VanW family protein%3B~PFAM: Putative peptidoglycan binding domain%3B G5 domain%3B VanW like protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1192 Toce_1193 Toce_1193 Toce_1193 1165520 1166920 - Conserved carboxylase region COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase~InterPro IPR000891:IPR003379~KEGG: tit:Thit_1131 conserved carboxylase region~PFAM: Conserved carboxylase region%3B pyruvate carboxyltransferase~SPTR: Conserved carboxylase region%3B~PFAM: HMGL-like%3B Conserved carboxylase domain~TIGRFAM: oxaloacetate decarboxylase alpha subunit gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1193 Toce_1194 Toce_1194 Toce_1194 1167100 1167510 - biotin/lipoyl attachment domain-containing protein COGs: COG0511 Biotin carboxyl carrier protein~InterPro IPR000089:IPR001882~KEGG: tai:Taci_0293 biotin/lipoyl attachment domain-containing protein~PFAM: biotin/lipoyl attachment domain-containing protein~SPTR: Biotin/lipoyl attachment domain-containing protein%3B~PFAM: Biotin-requiring enzyme gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1194 Toce_1195 Toce_1195 Toce_1195 1167535 1167870 - sodium pump decarboxylase gamma subunit InterPro IPR005899~KEGG: tpd:Teth39_0906 sodium pump decarboxylase%2C gamma subunit~PFAM: sodium pump decarboxylase gamma subunit~SPTR: Oxaloacetate decarboxylase gamma chain%3B~PFAM: Oxaloacetate decarboxylase%2C gamma chain~TIGRFAM: sodium pump decarboxylases%2C gamma subunit gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1195 Toce_1196 Toce_1196 Toce_1196 1167888 1169441 - propionyl-CoA carboxylase carboxyltransferase subunit COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)~InterPro IPR000022:IPR011762:IPR011763~KEGG: amt:Amet_4538 carboxyl transferase~PFAM: carboxyl transferase~SPTR: Carboxyl transferase%3B~PFAM: Carboxyl transferase domain~TIGRFAM: methylmalonyl-CoA decarboxylase alpha subunit gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1196 Toce_1197 Toce_1197 Toce_1197 1169460 1169861 - methylmalonyl-CoA epimerase InterPro IPR004360:IPR017515~KEGG: tpd:Teth39_0905 glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase%3B~TIGRFAM: methylmalonyl-CoA epimerase~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily~TIGRFAM: methylmalonyl-CoA epimerase gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1197 Toce_1198 Toce_1198 Toce_1198 1169874 1170803 - LAO/AO transport system ATPase COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family~InterPro IPR003593:IPR005129~KEGG: tpd:Teth39_0904 LAO/AO transport system ATPase~PFAM: ArgK protein~SMART: AAA ATPase~SPTR: LAO/AO transport system ATPase%3B~TIGRFAM: LAO/AO transport system ATPase~PFAM: ArgK protein~TIGRFAM: LAO/AO transport system ATPase gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1198 Toce_1199 Toce_1199 Toce_1199 1170819 1171220 - cobalamin B12-binding domain protein COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding)~InterPro IPR006158:IPR006159~KEGG: tpd:Teth39_0903 cobalamin B12-binding domain-containing protein~PFAM: cobalamin B12-binding domain protein~SPTR: Cobalamin B12-binding domain protein%3B~PFAM: B12 binding domain~TIGRFAM: methylmalonyl-CoA mutase C-terminal domain gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1199 Toce_1200 Toce_1200 Toce_1200 1171236 1172915 - methylmalonyl-CoA mutase COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit~InterPro IPR006099:IPR006098~KEGG: tex:Teth514_1855 methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase~PRIAM: Methylmalonyl-CoA mutase~SPTR: Methylmalonyl-CoA mutase%2C large subunit%3B~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: Methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase N-terminal domain gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1200 Toce_1201 Toce_1201 Toce_1201 1173039 1174286 - glutamate dehydrogenase (NAD) COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase~InterPro IPR006095:IPR006097:IPR006096:IPR014362~KEGG: tte:TTE1205 glutamate dehydrogenase/leucine dehydrogenase~PFAM: Glu/Leu/Phe/Val dehydrogenase %3B Glu/Leu/Phe/Val dehydrogenase dimerisation region~SPTR: Glu/Leu/Phe/Val dehydrogenase%3B~PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%3B Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1201 Toce_1202 Toce_1202 Toce_1202 1174362 1174898 - 2-oxoglutarate ferredoxin oxidoreductase%2C gamma subunit COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752:IPR011894~KEGG: aoe:Clos_1569 pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~SPTR: Pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit%3B~TIGRFAM: pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1202 Toce_1203 Toce_1203 Toce_1203 1174902 1175720 - 2-oxoglutarate ferredoxin oxidoreductase%2C beta subunit COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR011766~KEGG: aoe:Clos_1570 2-oxoglutarate ferredoxin oxidoreductase subunit beta~PFAM: thiamine pyrophosphate protein domain protein TPP-binding~SPTR: Thiamine pyrophosphate protein domain protein TPP-binding%3B~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1203 Toce_1204 Toce_1204 Toce_1204 1175713 1176867 - 2-oxoglutarate ferredoxin oxidoreductase%2C alpha subunit COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880:IPR005476~KEGG: aoe:Clos_1571 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein~PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B Transketolase domain protein~SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B~PFAM: domain%3B Transketolase%2C C-terminal domain gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1204 Toce_1205 Toce_1205 Toce_1205 1176851 1177063 - 4Fe-4S ferredoxin iron-sulfur binding domain protein InterPro IPR017900:IPR017896~KEGG: nth:Nther_1481 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1205 Toce_1206 Toce_1206 Toce_1206 1177207 1178013 - PHP domain protein COGs: COG0613 metal-dependent phosphoesterase (PHP family)~InterPro IPR003141:IPR004013~KEGG: drm:Dred_1914 phosphotransferase domain-containing protein~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~SPTR: PHP domain protein%3B~PFAM: PHP domain gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1206 Toce_1207 Toce_1207 Toce_1207 1178108 1178368 - Stage V sporulation protein S COGs: COG2359 conserved hypothetical protein~InterPro IPR007347~KEGG: tit:Thit_1164 stage V sporulation protein S~PFAM: Stage V sporulation protein S~SPTR: Stage V sporulation protein S%3B~PFAM: Stage V sporulation protein S (SpoVS) gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1207 Toce_1208 Toce_1208 Toce_1208 1178453 1179229 - metallophosphoesterase COGs: COG1692 conserved hypothetical protein~InterPro IPR004843:IPR005235~KEGG: dae:Dtox_3099 metallophosphoesterase~PFAM: metallophosphoesterase~SPTR: Metallophosphoesterase%3B~TIGRFAM: conserved hypothetical protein TIGR00282 gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1208 Toce_1209 Toce_1209 Toce_1209 1179284 1180816 - metal dependent phosphohydrolase COGs: COG1418 HD superfamily hydrolase~InterProIPR004087:IPR003607:IPR018111:IPR006674:IPR 017705:IPR006675:IPR004088~KEGG: pth:PTH_1302 phosphodiesterase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B K Homology%2C type 1%2C subgroup~SMART: metal-dependent phosphohydrolase HD region%3B KH domain protein~SPTR: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase%3B~TIGRFAM: YmdA/YtgF protein%3B metal dependent phophohydrolase~manually curated~PFAM: KH domain%3B HD domain%3B Domain of unknown function (DUF3552)~TIGRFAM: conserved hypothetical protein YmdA/YtgF%3B uncharacterized domain HDIG gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1209 Toce_1210 Toce_1210 Toce_1210 1181107 1182170 + pseudogene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1210 Toce_1211 Toce_1211 Toce_1211 1182173 1182847 - conserved hypothetical protein KEGG: cth:Cthe_1092 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1211 Toce_1212 Toce_1212 Toce_1212 1182861 1183097 - conserved hypothetical protein KEGG: cth:Cthe_0943 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1212 Toce_1213 Toce_1213 Toce_1213 1183101 1184552 - SMC domain protein COGs: COG0419 ATPase involved in DNA repair~InterPro IPR003395~KEGG: cth:Cthe_0944 SMC protein-like protein~PFAM: SMC domain protein~SPTR: SMC domain protein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1213 Toce_1214 Toce_1214 Toce_1214 1184553 1185557 - metallophosphoesterase COGs: COG0420 DNA repair exonuclease~InterPro IPR004843~KEGG: cth:Cthe_0945 metallophosphoesterase~PFAM: metallophosphoesterase~SPTR: Metallophosphoesterase%3B~PFAM: Calcineurin-like phosphoesterase gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1214 Toce_1215 Toce_1215 Toce_1215 1185559 1186590 - RecA protein COGs: COG0468 RecA/RadA recombinase~InterProIPR003593:IPR001553:IPR013765:IPR020584:IPR 020588:IPR020587~KEGG: mta:Moth_1079 RecA protein~PFAM: RecA domain protein~SMART: AAA ATPase~SPTR: Protein recA%3B~TIGRFAM: recA protein~PFAM: recA bacterial DNA recombination protein~TIGRFAM: protein RecA gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1215 Toce_1216 Toce_1216 Toce_1216 1186649 1187203 - 2'-5' RNA ligase COGs: COG1514 2'-5' RNA ligase~InterPro IPR014051:IPR004175~KEGG: dtu:Dtur_1462 2'-5' RNA ligase~PFAM: Phosphoesterase HXTX~SPTR: 2'-5' RNA ligase%3B~TIGRFAM: 2'-5' RNA ligase~PFAM: 2'%2C5' RNA ligase family~TIGRFAM: 2'-5' RNA ligase gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1216 Toce_1217 Toce_1217 Toce_1217 1187311 1187436 - hypothetical protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1217 Toce_1218 Toce_1218 Toce_1218 1187446 1188678 - competence/damage-inducible protein cinA COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA~InterPro IPR001453:IPR008136:IPR008135~KEGG: dtu:Dtur_0064 competence/damage-inducible protein CinA~PFAM: CinA domain protein%3B molybdopterin binding domain~SPTR: CinA-like protein%3B~TIGRFAM: competence/damage-inducible protein CinA~PFAM: Probable molybdopterin binding domain%3B Competence-damaged protein~TIGRFAM: competence/damage-inducible protein CinA N-terminal domain%3B competence/damage-inducible protein CinA C-terminal domain%3B molybdenum cofactor synthesis domain gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1218 Toce_1219 Toce_1219 Toce_1219 1188731 1190218 - Vesicle-fusing ATPase COGs: COG0465 ATP-dependent Zn protease~InterPro IPR003593:IPR003959:IPR000642:IPR003960~KEGG: hor:Hore_11930 microtubule-severing ATPase~PFAM: AAA ATPase central domain protein%3B peptidase M41~PRIAM: Vesicle-fusing ATPase~SMART: AAA ATPase~SPTR: Microtubule-severing ATPase%3B~PFAM: Peptidase family M41%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent metalloprotease FtsH gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1219 Toce_1220 Toce_1220 Toce_1220 1190240 1190824 - hypothetical protein KEGG: tpd:Teth39_2126 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1220 Toce_1221 Toce_1221 Toce_1221 1190859 1192184 - SSU ribosomal protein S12P methylthiotransferase COGs: COG0621 2-methylthioadenine synthetase~InterProIPR006638:IPR013848:IPR007197:IPR020612:IPR 005839:IPR005840:IPR002792~KEGG: ate:Athe_0983 MiaB-like tRNA modifying enzyme YliG~PFAM: Protein of unknown function UPF0004 %3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: MiaB-like tRNA modifying enzyme YliG%3B~TIGRFAM: MiaB-like tRNA modifying enzyme YliG%3B RNA modification enzyme%2C MiaB family~PFAM: TRAM domain%3B Radical SAM superfamily%3B Uncharacterized protein family UPF0004~TIGRFAM: MiaB-like tRNA modifying enzyme YliG%2C TIGR01125%3B RNA modification enzyme%2C MiaB family gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1221 Toce_1222 Toce_1222 Toce_1222 1192308 1193171 - conserved hypothetical protein COGs: COG1426 conserved hypothetical protein~KEGG: tit:Thit_1638 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1222 Toce_1223 Toce_1223 Toce_1223 1193257 1195434 - DNA translocase FtsK COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein~InterPro IPR003593:IPR002543:IPR018541~KEGG: pth:PTH_1293 DNA segregation ATPase FtsK/SpoIIIE and related proteins~PFAM: cell divisionFtsK/SpoIIIE%3B DNA translocase ftsK gamma~SMART: AAA ATPase~SPTR: DNA segregation ATPase FtsK/SpoIIIE and related proteins%3B~PFAM: Ftsk gamma domain%3B FtsK/SpoIIIE family gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1223 Toce_1224 Toce_1224 Toce_1224 1195518 1195733 - conserved hypothetical protein KEGG: pth:PTH_1291 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1224 Toce_1225 Toce_1225 Toce_1225 1195751 1196461 - ATP-dependent Clp protease proteolytic subunit ClpP COGs: COG0740 Protease subunit of ATP-dependent Clp protease~InterPro IPR001907~KEGG: mta:Moth_1071 ATP-dependent Clp protease proteolytic subunit ClpP~PFAM: peptidase S14 ClpP~SPTR: ATP-dependent Clp protease proteolytic subunit ClpP%3B~PFAM: Clp protease gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1225 Toce_1226 Toce_1226 Toce_1226 1196659 1197760 - pseudogene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1226 Toce_1227 Toce_1227 Toce_1227 1198004 1199671 - RNA-metabolising metallo-beta-lactamase COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily~InterPro IPR011108:IPR001587:IPR004613~KEGG: tte:TTE1253 metallo-beta-lactamase superfamily hydrolase~PFAM: RNA-metabolising metallo-beta-lactamase~SPTR: Beta-lactamase domain protein%3B~PFAM: Metallo-beta-lactamase superfamily%3B RNA-metabolising metallo-beta-lactamase~TIGRFAM: conserved hypothetical protein gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1227 Toce_1228 Toce_1228 Toce_1228 1199717 1199977 - sporulation protein%2C YlmC/YmxH family InterPro IPR014238~KEGG: bcq:BCQ_3589 PRC-barrel domain superfamily~SPTR: PRC-barrel domain superfamily%3B~TIGRFAM: sporulation protein%2C YlmC/YmxH family~PFAM: PRC-barrel domain~TIGRFAM: sporulation protein%2C YlmC/YmxH family gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1228 Toce_1229 Toce_1229 Toce_1229 1200038 1200487 - deoxyuridine 5'-triphosphate nucleotidohydrolase COGs: COG0756 dUTPase~InterPro IPR008180:IPR008181~KEGG: gsu:GSU1595 deoxyuridine 5'-triphosphate nucleotidohydrolase~PFAM: deoxyUTP pyrophosphatase~SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase%3B~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut~PFAM: dUTPase~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1229 Toce_1230 Toce_1230 Toce_1230 1200588 1201307 - polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: tte:TTE1386 xylanase/chitin deacetylase~PFAM: polysaccharide deacetylase~SPTR: Polysaccharide deacetylase%3B~PFAM: Polysaccharide deacetylase~TIGRFAM: probable sporulation protein%2C polysaccharide deacetylase family%3B polysaccharide deacetylase family sporulation protein PdaB gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1230 Toce_1231 Toce_1231 Toce_1231 1201404 1203512 - polyribonucleotide nucleotidyltransferase COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)~InterProIPR004087:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR012162:IPR004088~KEGG: hmo:HM1_2322 polyribonucleotide nucleotidyltransferase~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%3B K Homology%2C type 1%2C subgroup%3B RNA binding S1 domain protein~SMART: KH domain protein~SPTR: Polyribonucleotide nucleotidyltransferase%3B~TIGRFAM: polyribonucleotide nucleotidyltransferase~PFAM: KH domain%3B S1 RNA binding domain%3B 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2%3B Polyribonucleotide nucleotidyltransferase%2C RNA binding domain~TIGRFAM: polyribonucleotide nucleotidyltransferase gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1231 Toce_1232 Toce_1232 Toce_1232 1203628 1203897 - SSU ribosomal protein S15P COGs: COG0184 Ribosomal protein S15P/S13E~InterPro IPR000589:IPR005290~KEGG: tte:TTE1388 30S ribosomal protein S15~PFAM: ribosomal protein S15~SPTR: 30S ribosomal protein S15%3B~TIGRFAM: ribosomal protein S15~PFAM: Ribosomal protein S15~TIGRFAM: ribosomal protein S15%2C bacterial/organelle gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1232 Toce_1233 Toce_1233 Toce_1233 1204020 1204997 - riboflavin biosynthesis protein RibF COGs: COG0196 FAD synthase~InterPro IPR015864:IPR015865:IPR002606~KEGG: pth:PTH_1273 FAD synthase~PFAM: FAD synthetase%3B Riboflavin kinase~SPTR: FAD synthase%3B~TIGRFAM: riboflavin biosynthesis protein RibF~PFAM: Riboflavin kinase%3B FAD synthetase~TIGRFAM: riboflavin kinase/FMN adenylyltransferase gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1233 Toce_1234 Toce_1234 Toce_1234 1205011 1205904 - tRNA pseudouridine synthase B COGs: COG0130 Pseudouridine synthase~InterPro IPR002501:IPR014780~KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B~PFAM: pseudouridylate synthase TruB domain protein~SPTR: tRNA pseudouridine synthase B%3B~TIGRFAM: tRNA pseudouridine synthase B~PFAM: TruB family pseudouridylate synthase (N terminal domain)~TIGRFAM: tRNA pseudouridine 55 synthase gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1234 Toce_1235 Toce_1235 Toce_1235 1205901 1206872 - phosphoesterase RecJ domain protein COGs: COG0618 Exopolyphosphatase-related protein~InterPro IPR001667:IPR003156~KEGG: cth:Cthe_0989 phosphoesterase%2C RecJ-like protein~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~SPTR: Phosphoesterase%2C RecJ-like protein%3B~PFAM: DHH family%3B DHHA1 domain gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1235 Toce_1236 Toce_1236 Toce_1236 1206877 1207236 - ribosome-binding factor A COGs: COG0858 Ribosome-binding factor A~InterPro IPR000238:IPR020053~KEGG: cth:Cthe_0990 ribosome-binding factor A~PFAM: ribosome-binding factor A~SPTR: Ribosome-binding factor A%3B~TIGRFAM: ribosome-binding factor A~PFAM: Ribosome-binding factor A~TIGRFAM: ribosome-binding factor A gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1236 Toce_1237 Toce_1237 Toce_1237 1207255 1209267 - bacterial translation initiation factor 2 (bIF-2) COGs: COG0532 Translation initiation factor 2 (IF-2%3B GTPase)~InterProIPR006847:IPR000795:IPR004161:IPR000178:IPR 005225~KEGG: tex:Teth514_1645 translation initiation factor IF-2~PFAM: protein synthesis factor GTP-binding%3B translation initiation factor IF-2 domain protein%3B elongation factor Tu domain 2 protein~SPTR: Translation initiation factor IF-2%3B~TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Translation-initiation factor 2%3B Translation initiation factor IF-2%2C N-terminal region%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation initiation factor IF-2 gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1237 Toce_1238 Toce_1238 Toce_1238 1209254 1209595 - ribosomal protein L7Ae/L30e/S12e/Gadd45 COGs: COG1358 Ribosomal protein HS6-type (S12/L30/L7a)~InterPro IPR004038~KEGG: cth:Cthe_0992 50S ribosomal protein L7AE~PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45~SPTR: LSU ribosomal protein L7AE%3B~PFAM: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1238 Toce_1239 Toce_1239 Toce_1239 1209582 1209857 - protein of unknown function DUF448 COGs: COG2740 nucleic-acid-binding protein implicated in transcription termination~InterPro IPR007393~KEGG: chy:CHY_1768 hypothetical protein~PFAM: protein of unknown function DUF448~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF448) gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1239 Toce_1240 Toce_1240 Toce_1240 1209847 1210902 - transcription termination factor NusA COGs: COG0195 Transcription elongation factor~InterProIPR004087:IPR013735:IPR003029:IPR010213:IPR 004088~KEGG: tpd:Teth39_1212 transcription elongation factor NusA~PFAM: NusA domain protein%3B RNA binding S1 domain protein~SMART: KH domain protein~SPTR: NusA antitermination factor%3B~TIGRFAM: transcription termination factor NusA~PFAM: NusA N-terminal domain%3B S1 RNA binding domain~TIGRFAM: transcription termination factor NusA gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1240 Toce_1241 Toce_1241 Toce_1241 1210899 1211387 - protein of unknown function DUF150 InterPro IPR003728:IPR020790~KEGG: cth:Cthe_0995 hypothetical protein~PFAM: protein of unknown function DUF150~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C YhbC family COG0779 gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1241 Toce_1242 Toce_1242 Toce_1242 1211510 1215757 - DNA polymerase III catalytic subunit%2C PolC type COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type)~InterProIPR006308:IPR006054:IPR004365:IPR004013:IPR 013520:IPR011708:IPR003141:IPR006055~KEGG: tex:Teth514_1650 DNA polymerase III PolC~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B Exonuclease RNase T and DNA polymerase III~PRIAM: DNA-directed DNA polymerase~SMART: Exonuclease%3B phosphoesterase PHP domain protein~SPTR: DNA polymerase III%2C alpha subunit%3B~TIGRFAM: DNA polymerase III%2C alpha subunit%3B DNA polymerase III%2C epsilon subunit~PFAM: DNA polymerase III polC-type N-terminus%3B Bacterial DNA polymerase III alpha subunit%3B PHP domain%3B Exonuclease%3B OB-fold nucleic acid binding domain~TIGRFAM: exonuclease%2C DNA polymerase III%2C epsilon subunit family%3B DNA polymerase III%2C alpha chain%2C Gram-positive type gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1242 Toce_1243 Toce_1243 Toce_1243 1215772 1216434 - MgtC/SapB transporter COGs: COG1285 membrane protein~InterPro IPR003416:IPR002912~KEGG: swo:Swol_0894 MgtC family protein~PFAM: MgtC/SapB transporter%3B amino acid-binding ACT domain protein~SPTR: MgtC family protein%3B~PFAM: MgtC family%3B ACT domain gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1243 Toce_1244 Toce_1244 Toce_1244 1216435 1217079 - glycosyl transferase family 2 COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis~InterPro IPR001173~KEGG: hor:Hore_07780 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: Glycosyl transferase family 2%3B~PFAM: Glycosyl transferase family 2 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1244 Toce_1245 Toce_1245 Toce_1245 1217138 1218607 - YbaK/prolyl-tRNA synthetase associated region COGs: COG0442 Prolyl-tRNA synthetase~InterPro IPR007214:IPR004154~KEGG: dau:Daud_0618 prolyl-tRNA synthetase~PFAM: YbaK/prolyl-tRNA synthetase associated region%3B Anticodon-binding domain protein~SPTR: Prolyl-tRNA synthetase%3B~PFAM: YbaK / prolyl-tRNA synthetases associated domain%3B Anticodon binding domain gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1245 Toce_1246 Toce_1246 Toce_1246 1218625 1220064 - prolyl-tRNA synthetase COGs: COG0442 Prolyl-tRNA synthetase~InterProIPR004499:IPR002314:IPR004154:IPR016061:IPR 006195:IPR002316~KEGG: nth:Nther_0435 prolyl-tRNA synthetase~PFAM: Prolyl-tRNA synthetase%2C class II-like%3B Anticodon-binding domain protein%3B tRNA synthetase class II (G H P and S)~SPTR: Prolyl-tRNA synthetase%3B~TIGRFAM: prolyl-tRNA synthetase~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%3B Prolyl-tRNA synthetase%2C C-terminal~TIGRFAM: prolyl-tRNA synthetase%2C family I gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1246 Toce_1247 Toce_1247 Toce_1247 1220421 1220750 - hypothetical protein KEGG: cdu:CD36_61930 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1247 Toce_1248 Toce_1248 Toce_1248 1220740 1221210 - hypothetical protein KEGG: tet:TTHERM_00725840 hypothetical protein~SPTR: SPV107 putative DNA helicase transcriptional elongation factor gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1248 Toce_1249 Toce_1249 Toce_1249 1221441 1222523 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis~InterPro IPR004588:IPR016425~KEGG: tpd:Teth39_1216 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~PFAM: IspG family protein~SPTR: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase%3B~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~PFAM: GcpE protein~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1249 Toce_1250 Toce_1250 Toce_1250 1222556 1223557 - membrane-associated zinc metalloprotease COGs: COG0750 membrane-associated Zn-dependent protease 1~InterPro IPR004387:IPR008915:IPR001478~KEGG: tte:TTE1401 membrane-associated Zn-dependent protease 1~PFAM: peptidase M50%3B PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~SPTR: Predicted membrane-associated Zn-dependent protease 1%3B~TIGRFAM: membrane-associated zinc metalloprotease~PFAM: Peptidase family M50%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: RIP metalloprotease RseP gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1250 Toce_1251 Toce_1251 Toce_1251 1223579 1224637 - sporulation integral membrane protein YtvI COGs: COG0628 permease~InterPro IPR014227:IPR002549~KEGG: tte:TTE0022 permease~PFAM: protein of unknown function UPF0118~SPTR: Predicted permease%3B~TIGRFAM: sporulation integral membrane protein YtvI~PFAM: Domain of unknown function DUF20~TIGRFAM: sporulation integral membrane protein YtvI gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1251 Toce_1252 Toce_1252 Toce_1252 1224628 1225452 - phosphatidate cytidylyltransferase COGs: COG0575 CDP-diglyceride synthetase~InterPro IPR000374~KEGG: amt:Amet_2683 phosphatidate cytidylyltransferase~PFAM: phosphatidate cytidylyltransferase~SPTR: Phosphatidate cytidylyltransferase%3B~PFAM: Cytidylyltransferase family gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1252 Toce_1253 Toce_1253 Toce_1253 1225453 1226199 - Undecaprenyl pyrophosphate synthetase COGs: COG0020 Undecaprenyl pyrophosphate synthase~InterPro IPR001441:IPR018520~KEGG: mta:Moth_1038 undecaprenyl pyrophosphate synthetase~PFAM: Di-trans-poly-cis-decaprenylcistransferase~PRIAM: Di-trans%2Cpoly-cis-decaprenylcistransferase~SPTR: Undecaprenyl pyrophosphate synthetase%3B~TIGRFAM: undecaprenyl diphosphate synthase~PFAM: Putative undecaprenyl diphosphate synthase~TIGRFAM: undecaprenyl diphosphate synthase gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1253 Toce_1254 Toce_1254 Toce_1254 1226462 1227019 - ribosome recycling factor COGs: COG0233 Ribosome recycling factor~InterPro IPR002661:IPR015998~KEGG: tte:TTE1406 ribosome recycling factor~PFAM: ribosome recycling factor~SPTR: Ribosome recycling factor%3B~TIGRFAM: ribosome recycling factor~PFAM: Ribosome recycling factor~TIGRFAM: ribosome recycling factor gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1254 Toce_1255 Toce_1255 Toce_1255 1227024 1227737 - uridylate kinase COGs: COG0528 Uridylate kinase~InterPro IPR015963:IPR001048:IPR011817:IPR001057~KEGG: chy:CHY_1785 uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase~SPTR: Uridylate kinase%3B~TIGRFAM: uridylate kinase~PFAM: Amino acid kinase family~TIGRFAM: uridylate kinase gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1255 Toce_1256 Toce_1256 Toce_1256 1227850 1228464 - translation elongation factor Ts (EF-Ts) COGs: COG0264 Translation elongation factor Ts~InterPro IPR001816:IPR000449:IPR014039:IPR018101~KEGG: aac:Aaci_1420 translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B dimerisation%3B ubiquitin-associated- domain-containing protein~SPTR: Elongation factor Ts%3B~TIGRFAM: translation elongation factor Ts~PFAM: Elongation factor TS%3B UBA/TS-N domain~TIGRFAM: translation elongation factor Ts gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1256 Toce_1257 Toce_1257 Toce_1257 1228542 1229243 - SSU ribosomal protein S2P COGs: COG0052 Ribosomal protein S2~InterPro IPR005706:IPR001865:IPR018130~KEGG: gka:GK1249 30S ribosomal protein S2~PFAM: ribosomal protein S2~SPTR: 30S ribosomal protein S2%3B~TIGRFAM: ribosomal protein S2~PFAM: Ribosomal protein S2~TIGRFAM: ribosomal protein S2%2C bacterial type gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1257 Toce_1258 Toce_1258 Toce_1258 1229386 1230357 - CoA-substrate-specific enzyme activase COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)~InterPro IPR008275:IPR002731~KEGG: mta:Moth_1149 CoA enzyme activase~PFAM: ATPase BadF/BadG/BcrA/BcrD type~SPTR: CoA enzyme activase%3B~TIGRFAM: CoA-substrate-specific enzyme activase~PFAM: BadF/BadG/BcrA/BcrD ATPase family~TIGRFAM: CoA-substrate-specific enzyme activase%2C putative gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1258 Toce_1259 Toce_1259 Toce_1259 1230332 1231441 - conserved hypothetical protein COGs: COG3581 conserved hypothetical protein~KEGG: hmo:HM1_0328 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: CoA enzyme activase uncharacterised domain (DUF2229) gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1259 Toce_1260 Toce_1260 Toce_1260 1231413 1232423 - Protein of unknown function DUF2229%2C CoA enzyme activase COGs: COG3580 conserved hypothetical protein~InterPro IPR018709~KEGG: amt:Amet_1169 hypothetical protein~PFAM: Protein of unknown function DUF2229%2C CoA enzyme activase~SPTR: Putative uncharacterized protein%3B~PFAM: CoA enzyme activase uncharacterised domain (DUF2229) gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1260 Toce_1261 Toce_1261 Toce_1261 1232489 1232860 - hypothetical protein KEGG: blo:BL1632 hypothetical protein~SPTR: MFS transporter gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1261 Toce_1262 Toce_1262 Toce_1262 1232873 1233226 - stage V sporulation protein AE InterPro IPR014204:IPR005562~KEGG: csc:Csac_0090 SpoVA protein~PFAM: SpoVA protein~SPTR: SpoVA protein%3B~TIGRFAM: stage V sporulation protein AE~PFAM: SpoVA protein~TIGRFAM: stage V sporulation protein AE gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1262 Toce_1263 Toce_1263 Toce_1263 1233249 1234259 - stage V sporulation protein AD InterPro IPR010894~KEGG: amt:Amet_2220 stage V sporulation protein AD~PFAM: Stage V sporulation AD family protein~SPTR: Stage V sporulation AD family protein%3B~TIGRFAM: stage V sporulation protein AD~PFAM: Stage V sporulation protein AD (SpoVAD)~TIGRFAM: stage V sporulation protein AD gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1263 Toce_1264 Toce_1264 Toce_1264 1234270 1234722 - stage V sporulation protein AC InterPro IPR014203:IPR005562~KEGG: cdl:CDR20291_0702 stage V sporulation protein AC~PFAM: SpoVA protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: stage V sporulation protein AC~PFAM: SpoVA protein~TIGRFAM: stage V sporulation protein AC gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1264 Toce_1265 Toce_1265 Toce_1265 1234737 1234949 - protein of unknown function DUF1458 InterPro IPR009923~KEGG: nth:Nther_1660 protein of unknown function DUF1458~PFAM: protein of unknown function DUF1458~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1458) gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1265 Toce_1266 Toce_1266 Toce_1266 1234946 1235134 - transposase IS4 family protein KEGG: rca:Rcas_4064 transposase IS4 family protein~SPTR: Transposase IS4 family protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1266 Toce_1267 Toce_1267 Toce_1267 1235222 1235947 - RNA polymerase%2C sigma subunit%2C RpoX/SigF COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterProIPR014236:IPR014322:IPR014284:IPR007627:IPR 007624:IPR007630:IPR000943~KEGG: dae:Dtox_2066 RNA polymerase%2C sigma 28 subunit%2C SigF~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 4 domain protein~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-F factor%3B RNA polymerase sigma-70 factor%2C sigma-B/F/G subfamily%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 3%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-70 factor%2C sigma-B/F/G subfamily%3B RNA polymerase sigma-F factor gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1267 Toce_1268 Toce_1268 Toce_1268 1235969 1236400 - putative anti-sigma regulatory factor%2C serine/threonine protein kinase COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase)~InterPro IPR010194:IPR003594~KEGG: tpd:Teth39_1121 anti-sigma F factor~PFAM: ATP-binding region ATPase domain protein~PRIAM: Non-specific serine/threonine protein kinase~SMART: ATP-binding region ATPase domain protein~SPTR: Anti-sigma regulatory factor%2C serine/threonine protein kinase%3B~TIGRFAM: anti-sigma F factor~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase~TIGRFAM: anti-sigma F factor gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1268 Toce_1269 Toce_1269 Toce_1269 1236416 1236739 - anti-sigma-factor antagonist COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)~InterPro IPR003658:IPR014237:IPR002645~KEGG: tte:TTE1315 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~SPTR: Anti-sigma factor antagonist%3B~TIGRFAM: anti-sigma F factor antagonist%3B anti-anti-sigma factor~PFAM: STAS domain~TIGRFAM: anti-anti-sigma factor%3B anti-sigma F factor antagonist gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1269 Toce_1270 Toce_1270 Toce_1270 1236864 1238036 - Serine-type D-Ala-D-Ala carboxypeptidase COGs: COG1686 D-alanyl-D-alanine carboxypeptidase~InterPro IPR001967:IPR012907:IPR018044~KEGG: aoe:Clos_1588 serine-type D-Ala-D-Ala carboxypeptidase~PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1%3B Penicillin-binding protein 5 domain protein~PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase~SPTR: Serine-type D-Ala-D-Ala carboxypeptidase%3B~PFAM: D-alanyl-D-alanine carboxypeptidase%3B Penicillin-binding protein 5%2C C-terminal domain gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1270 Toce_1271 Toce_1271 Toce_1271 1238096 1238995 - tyrosine recombinase XerD subunit COGs: COG4974 Site-specific recombinase XerD~InterPro IPR011932:IPR004107:IPR002104~KEGG: bbe:BBR47_23810 probable tyrosine recombinase~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~SPTR: Probable tyrosine recombinase%3B~TIGRFAM: tyrosine recombinase XerD~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family~TIGRFAM: tyrosine recombinase XerC%3B tyrosine recombinase XerD gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1271 Toce_1272 Toce_1272 Toce_1272 1239042 1239668 - stage II sporulation protein M InterPro IPR014196:IPR002798~KEGG: aoe:Clos_1594 sporulation stage II protein M~PFAM: protein of unknown function DUF95 transmembrane~SPTR: Sporulation stage II protein M%3B~TIGRFAM: stage II sporulation protein M~PFAM: Integral membrane protein DUF95~TIGRFAM: stage II sporulation protein M gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1272 Toce_1273 Toce_1273 Toce_1273 1239729 1240901 - PHP domain protein COGs: COG1379 conserved hypothetical protein~InterPro IPR004013~KEGG: tte:TTE1311 hypothetical protein~PFAM: PHP domain protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: conserved hypothetical protein TIGR00375 gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1273 Toce_1274 Toce_1274 Toce_1274 1240901 1241443 - NUDIX hydrolase InterPro IPR000086:IPR020084~KEGG: tte:TTE1310 NTP pyrophosphohydrolase including oxidative damage repair enzyme~PFAM: NUDIX hydrolase~SPTR: NTP pyrophosphohydrolases including oxidative damage repair enzymes%3B~PFAM: NUDIX domain~TIGRFAM: nudix hydrolase%2C YffH family gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1274 Toce_1275 Toce_1275 Toce_1275 1241386 1242537 - conserved hypothetical protein KEGG: drm:Dred_1093 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1275 Toce_1276 Toce_1276 Toce_1276 1242559 1243347 - conserved hypothetical protein KEGG: dau:Daud_1611 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Glycosyl transferase family 4 gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1276 Toce_1277 Toce_1277 Toce_1277 1243358 1244071 - hypothetical protein KEGG: tte:TTE1306 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3186) gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1277 Toce_1278 Toce_1278 Toce_1278 1244083 1245210 - Thiamin pyrophosphokinase catalytic region COGs: COG4825 Uncharacterized membrane-anchored protein~InterPro IPR007371:IPR000209~KEGG: tit:Thit_1099 thiamin pyrophosphokinase catalytic region~PFAM: Thiamin pyrophosphokinase catalytic region~SPTR: Thiamin pyrophosphokinase catalytic region%3B~PFAM: Thiamine pyrophosphokinase C terminal%3B Thiamin pyrophosphokinase%2C catalytic domain gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1278 Toce_1279 Toce_1279 Toce_1279 1245337 1246812 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1279 Toce_1280 Toce_1280 Toce_1280 1246936 1247766 - conserved hypothetical protein KEGG: hau:Haur_0657 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: P22 coat protein - gene protein 5 gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1280 Toce_1281 Toce_1281 Toce_1281 1247790 1248392 - conserved hypothetical protein KEGG: cbb:CLD_2446 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1281 Toce_1282 Toce_1282 Toce_1282 1248570 1249451 - phage head morphogenesis protein%2C SPP1 gp7 family InterPro IPR006528~KEGG: cbi:CLJ_B1815 phage head morphogenesis protein%2C SPP1 gp7 family~PFAM: putative head morphogenesis protein SPP1 gp7~SPTR: Putative phage head morphogenesis protein%2C SPP1 gp7 family%3B~TIGRFAM: phage head morphogenesis protein%2C SPP1 gp7 family~PFAM: Phage Mu protein F like protein~TIGRFAM: phage putative head morphogenesis protein%2C SPP1 gp7 family gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1282 Toce_1283 Toce_1283 Toce_1283 1249444 1250721 - phage portal protein%2C SPP1 family InterPro IPR006428:IPR021145~KEGG: cbl:CLK_1336 SPP1 family phage portal protein~PFAM: Bacteriophage portal protein%2C SPP1 Gp6-like~SPTR: Phage portal protein%2C SPP1 family%3B~TIGRFAM: phage portal protein%2C SPP1 family~PFAM: Phage portal protein%2C SPP1 Gp6-like~TIGRFAM: phage portal protein%2C SPP1 family gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1283 Toce_1284 Toce_1284 Toce_1284 1250739 1252526 - phage uncharacterized protein InterPro IPR006517~KEGG: cbb:CLD_2442 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: phage uncharacterized protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1284 Toce_1285 Toce_1285 Toce_1285 1253070 1253462 - hypothetical protein KEGG: cbk:CLL_A1924 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Transposase gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1285 Toce_1286 Toce_1286 Toce_1286 1253729 1253935 - hypothetical protein KEGG: smb:smi_1282 hypothetical protein~SPTR: DNA-directed RNA polymerase gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1286 Toce_1287 Toce_1287 Toce_1287 1254005 1254784 - conserved hypothetical protein KEGG: swo:Swol_1313 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1287 Toce_1288 Toce_1288 Toce_1288 1254853 1258894 - pseudogene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1288 Toce_1289 Toce_1289 Toce_1289 1255497 1256726 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894:IPR000169~KEGG: chy:CHY_1117 ISChy4%2C transposase~PFAM: Integrase catalytic region~SPTR: ISChy4%2C transposase%3B~PFAM: Mu transposase%2C C-terminal%3B Integrase core domain gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1289 Toce_1290 Toce_1290 Toce_1290 1256723 1257493 + IstB transposition helper protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593:IPR001270~KEGG: chy:CHY_1116 ISChy4%2C transposition helper protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: ISChy4%2C transposition helper protein%3B~PFAM: IstB-like ATP binding protein gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1290 Toce_1291 Toce_1291 Toce_1291 1258941 1259111 - hypothetical protein SPTR: Putative uncharacterized protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1291 Toce_1292 Toce_1292 Toce_1292 1259160 1259615 - hypothetical protein KEGG: eat:EAT1b_1299 signal transduction histidine kinase%2C LytS~SPTR: Putative two component system%2C sensor protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1292 Toce_1293 Toce_1293 Toce_1293 1259777 1259935 - conserved hypothetical protein KEGG: sso:SSO1818 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1293 Toce_1294 Toce_1294 Toce_1294 1259928 1260119 - conserved hypothetical protein InterPro IPR001387~KEGG: bcy:Bcer98_1286 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1294 Toce_1295 Toce_1295 Toce_1295 1260311 1261513 - hypothetical protein KEGG: oih:OB2431 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1295 Toce_1296 Toce_1296 Toce_1296 1261882 1263405 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1296 Toce_1297 Toce_1297 Toce_1297 1263399 1264130 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~manually curated~PFAM: IstB-like ATP binding protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1297 Toce_1298 Toce_1298 Toce_1298 1264841 1265068 - hypothetical protein KEGG: tet:TTHERM_00248220 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1298 Toce_1299 Toce_1299 Toce_1299 1265108 1266079 - integrase family protein COGs: COG4974 Site-specific recombinase XerD~InterPro IPR004107:IPR002104~KEGG: cby:CLM_2087 site-specific recombinase%2C phage integrase family~PFAM: integrase family protein%3B integrase domain protein SAM domain protein~SPTR: Integrase/recombinase (XerC/CodV family)%3B~PFAM: Phage integrase%2C N-terminal SAM-like domain%3B Phage integrase family gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1299 Toce_1300 Toce_1300 Toce_1300 1266214 1266999 - sporulation transcriptional activator Spo0A COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR012052:IPR001789:IPR014879~KEGG: cdl:CDR20291_1052 stage 0 sporulation protein A~PFAM: Sporulation initiation factor Spo0A %3B response regulator receiver~SMART: response regulator receiver~SPTR: Putative uncharacterized protein%3B~TIGRFAM: sporulation transcription factor Spo0A~PFAM: Sporulation initiation factor Spo0A C terminal%3B Response regulator receiver domain~TIGRFAM: sporulation transcription factor Spo0A gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1300 Toce_1301 Toce_1301 Toce_1301 1267083 1268396 - stage IV sporulation protein B InterPro IPR014219:IPR008763~KEGG: tpd:Teth39_1108 peptidase S55%2C SpoIVB~PFAM: peptidase S55 SpoIVB~PRIAM: SpoIVB peptidase~SPTR: Peptidase S55%2C SpoIVB%3B~TIGRFAM: stage IV sporulation protein B~PFAM: SpoIVB peptidase S55~TIGRFAM: stage IV sporulation protein B gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1301 Toce_1302 Toce_1302 Toce_1302 1268504 1270234 - DNA repair protein RecN COGs: COG0497 ATPase involved in DNA repair~InterPro IPR004604:IPR003395~KEGG: cce:Ccel_1896 DNA repair protein RecN~PFAM: SMC domain protein~SPTR: DNA repair protein RecN%3B~TIGRFAM: DNA repair protein RecN~PFAM: RecF/RecN/SMC N terminal domain~TIGRFAM: DNA repair protein RecN gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1302 Toce_1303 Toce_1303 Toce_1303 1270252 1270704 - transcriptional regulator%2C ArgR family COGs: COG1438 Arginine repressor~InterPro IPR001669:IPR020899~KEGG: tpd:Teth39_1106 arginine repressor~PFAM: Arginine repressor-like~SPTR: Arginine repressor%2C ArgR%3B~TIGRFAM: arginine repressor~PFAM: Arginine repressor%2C C-terminal domain%3B Arginine repressor%2C DNA binding domain~TIGRFAM: arginine repressor gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1303 Toce_1304 Toce_1304 Toce_1304 1270725 1271585 - ATP-NAD/AcoX kinase COGs: COG0061 sugar kinase~InterPro IPR002504~KEGG: tte:TTE1300 kinase~PFAM: ATP-NAD/AcoX kinase~SPTR: NAD(+)/NADH kinase%2C putative%3B~PFAM: ATP-NAD kinase gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1304 Toce_1305 Toce_1305 Toce_1305 1271587 1272102 - hypothetical protein KEGG: drm:Dred_1080 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1305 Toce_1306 Toce_1306 Toce_1306 1272125 1272919 - hemolysin A COGs: COG1189 rRNA methylase~InterPro IPR004538:IPR002942:IPR002877~KEGG: cth:Cthe_0827 hemolysin A~PFAM: RNA-binding S4 domain protein%3B ribosomal RNA methyltransferase RrmJ/FtsJ~SMART: RNA-binding S4 domain protein~SPTR: Hemolysin A%3B~TIGRFAM: hemolysin A~manually curated~PFAM: S4 domain%3B FtsJ-like methyltransferase~TIGRFAM: hemolysin TlyA family protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1306 Toce_1307 Toce_1307 Toce_1307 1272938 1273546 - membrane spanning protein KEGG: ctc:CTC01576 membrane spanning protein~SPTR: Membrane spanning protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1307 Toce_1308 Toce_1308 Toce_1308 1274263 1275153 - farnesyl-diphosphate synthase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: drm:Dred_1076 polyprenyl synthetase~PFAM: Polyprenyl synthetase~SPTR: Farnesyl-diphosphate synthase%3B~PFAM: Polyprenyl synthetase gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1308 Toce_1309 Toce_1309 Toce_1309 1275156 1275386 - Exodeoxyribonuclease VII small subunit InterPro IPR003761~KEGG: ate:Athe_1003 exodeoxyribonuclease VII%2C small subunit~PFAM: Exonuclease VII small subunit~SPTR: Strongly similar to exodeoxyribonuclease VII small chain Escherichia coli (K12)%3B~TIGRFAM: exodeoxyribonuclease VII%2C small subunit~PFAM: Exonuclease VII small subunit~TIGRFAM: exodeoxyribonuclease VII%2C small subunit gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1309 Toce_1310 Toce_1310 Toce_1310 1275373 1276605 - Exodeoxyribonuclease VII large subunit COGs: COG1570 Exonuclease VII large subunit~InterPro IPR003753:IPR004365:IPR020579~KEGG: cth:Cthe_0833 exodeoxyribonuclease VII large subunit~PFAM: Exonuclease VII%2C large subunit-like%3B nucleic acid binding OB-fold tRNA/helicase-type~SPTR: Exodeoxyribonuclease 7 large subunit%3B~TIGRFAM: exodeoxyribonuclease VII%2C large subunit~PFAM: Exonuclease VII%2C large subunit%3B OB-fold nucleic acid binding domain~TIGRFAM: exodeoxyribonuclease VII%2C large subunit gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1310 Toce_1311 Toce_1311 Toce_1311 1276623 1277087 - NusB antitermination factor COGs: COG0781 Transcription termination factor~InterPro IPR011605:IPR006027~KEGG: adg:Adeg_1279 NusB antitermination factor~PFAM: NusB/RsmB/TIM44~SPTR: NusB antitermination factor%3B~TIGRFAM: transcription antitermination factor NusB~PFAM: NusB family~TIGRFAM: transcription antitermination factor NusB gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1311 Toce_1312 Toce_1312 Toce_1312 1277059 1277274 - Protein of unknown function DUF2273 InterPro IPR018730~KEGG: cce:Ccel_1906 hypothetical protein~PFAM: Protein of unknown function DUF2273~SPTR: Putative uncharacterized protein%3B~PFAM: Small integral membrane protein (DUF2273) gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1312 Toce_1313 Toce_1313 Toce_1313 1277286 1277819 - protein of unknown function DUF322 InterPro IPR005531~KEGG: mta:Moth_1522 hypothetical protein~PFAM: protein of unknown function DUF322~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF322) gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1313 Toce_1314 Toce_1314 Toce_1314 1277872 1278249 - protein of unknown function DUF322 COGs: COG1302 conserved hypothetical protein~InterPro IPR005531:IPR005829~KEGG: tit:Thit_1085 protein of unknown function DUF322~PFAM: protein of unknown function DUF322~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF322) gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1314 Toce_1315 Toce_1315 Toce_1315 1278347 1278886 - conserved hypothetical protein KEGG: tit:Thit_1084 hypothetical protein~SPTR: Stage III sporulation protein AH gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1315 Toce_1316 Toce_1316 Toce_1316 1278902 1279498 - stage III sporulation protein AG KEGG: tit:Thit_1083 stage III sporulation protein AG~SPTR: Stage III sporulation protein AG%3B~TIGRFAM: stage III sporulation protein AG gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1316 Toce_1317 Toce_1317 Toce_1317 1279477 1280088 - stage III sporulation protein AF InterPro IPR014245~KEGG: amt:Amet_2497 sporulation stage III%2C protein AF~PFAM: Sporulation stage III protein AF~SPTR: Sporulation stage III%2C protein AF%3B~TIGRFAM: stage III sporulation protein AF~PFAM: Stage III sporulation protein AF (Spore_III_AF)~TIGRFAM: stage III sporulation protein AF gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1317 Toce_1318 Toce_1318 Toce_1318 1280093 1281241 - stage III sporulation protein AE InterPro IPR014194~KEGG: dae:Dtox_2607 stage III sporulation protein AE~PFAM: Sporulation stage III protein AE~SPTR: Stage III sporulation protein AE%3B~TIGRFAM: stage III sporulation protein AE~PFAM: Stage III sporulation protein AE (spore_III_AE)~TIGRFAM: stage III sporulation protein AE gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1318 Toce_1319 Toce_1319 Toce_1319 1281254 1281640 - stage III sporulation protein AD InterPro IPR014211~KEGG: dae:Dtox_2608 stage III sporulation protein AD~SPTR: Stage III sporulation protein AD%3B~TIGRFAM: stage III sporulation protein AD~PFAM: Stage III sporulation protein AC/AD protein family~TIGRFAM: stage III sporulation protein AD gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1319 Toce_1320 Toce_1320 Toce_1320 1281652 1281849 - stage III sporulation protein AC InterPro IPR009570:IPR005829~KEGG: amt:Amet_2494 stage III sporulation AC family protein~SPTR: Stage III sporulation AC family protein%3B~TIGRFAM: stage III sporulation protein AC~PFAM: Stage III sporulation protein AC/AD protein family~TIGRFAM: stage III sporulation protein AC gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1320 Toce_1321 Toce_1321 Toce_1321 1281867 1282388 - stage III sporulation protein AB InterPro IPR014198~KEGG: drm:Dred_1057 stage III sporulation protein SpoAB~PFAM: Sporulation stage III protein AB~SPTR: Stage III sporulation protein AB%3B~TIGRFAM: stage III sporulation protein AB~PFAM: Stage III sporulation protein AB (spore_III_AB)~TIGRFAM: stage III sporulation protein AB gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1321 Toce_1322 Toce_1322 Toce_1322 1282378 1283403 - stage III sporulation protein AA COGs: COG3854 conserved hypothetical protein~InterPro IPR014217:IPR003593~KEGG: tpd:Teth39_1088 AAA ATPase~SMART: AAA ATPase~SPTR: AAA ATPase%3B~TIGRFAM: stage III sporulation protein AA~TIGRFAM: stage III sporulation protein AA gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1322 Toce_1323 Toce_1323 Toce_1323 1283509 1283943 - conserved hypothetical protein KEGG: mta:Moth_1537 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1323 Toce_1324 Toce_1324 Toce_1324 1283965 1284522 - translation elongation factor P (EF-P) COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)~InterProIPR011768:IPR013185:IPR001059:IPR015365:IPR 020599:IPR013852~KEGG: mta:Moth_1538 elongation factor P~PFAM: Elongation factor P %3B Elongation factor KOW domain protein%3B Elongation factor P/YeiP protein~SPTR: Elongation factor P%3B~TIGRFAM: translation elongation factor P~PFAM: Elongation factor P%2C C-terminal%3B Elongation factor P (EF-P) KOW-like domain%3B Elongation factor P (EF-P) OB domain~TIGRFAM: translation elongation factor P gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1324 Toce_1325 Toce_1325 Toce_1325 1284562 1285632 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR000587:IPR000994~KEGG: drm:Dred_1051 peptidase M24~PFAM: peptidase M24%3B creatinase~SPTR: Peptidase M24%3B~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1325 Toce_1326 Toce_1326 Toce_1326 1285613 1286653 - 3-dehydroquinate dehydratase%2C type II COGs: COG0757 3-dehydroquinate dehydratase II~InterPro IPR001874:IPR000623~KEGG: abu:Abu_0488 3-dehydroquinate dehydratase~PFAM: dehydroquinase class II%3B shikimate kinase~PRIAM: Shikimate kinase.%2C 3-dehydroquinate dehydratase~SPTR: 3-dehydroquinate dehydratase%3B~TIGRFAM: 3-dehydroquinate dehydratase%2C type II~PFAM: Shikimate kinase%3B Dehydroquinase class II~TIGRFAM: 3-dehydroquinate dehydratase%2C type II gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1326 Toce_1327 Toce_1327 Toce_1327 1286650 1287183 - hypothetical protein KEGG: tpd:Teth39_1079 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Pilus assembly protein%2C PilO gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1327 Toce_1328 Toce_1328 Toce_1328 1287167 1287721 - Fimbrial assembly family protein InterPro IPR007813~KEGG: mta:Moth_1544 fimbrial assembly~PFAM: Fimbrial assembly family protein~SPTR: Fimbrial assembly%3B~PFAM: Fimbrial assembly protein (PilN) gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1328 Toce_1329 Toce_1329 Toce_1329 1287718 1288737 - type IV pilus assembly protein PilM COGs: COG4972 Tfp pilus assembly protein ATPase PilM~InterPro IPR005883:IPR003494~KEGG: mxa:MXAN_5776 type IV pilus biogenesis protein PilM~PFAM: cell division protein FtsA~SPTR: Type IV pilus biogenesis protein PilM%3B~TIGRFAM: type IV pilus assembly protein PilM~PFAM: Competence protein A%3B Cell division protein FtsA~TIGRFAM: type IV pilus assembly protein PilM gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1329 Toce_1330 Toce_1330 Toce_1330 1288737 1289009 - Late competence development protein ComFB InterPro IPR019657~KEGG: cth:Cthe_0851 hypothetical protein~PFAM: Late competence development protein ComFB~SPTR: Putative uncharacterized protein%3B~PFAM: Late competence development protein ComFB gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1330 Toce_1331 Toce_1331 Toce_1331 1289032 1289517 - hypothetical protein InterPro IPR012902:IPR001120~KEGG: dae:Dtox_2703 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1331 Toce_1332 Toce_1332 Toce_1332 1289477 1289854 - conserved hypothetical protein InterPro IPR012902:IPR001120~KEGG: sat:SYN_01760 hypothetical protein~SPTR: Hypothetical membrane protein%3B~PFAM: Prokaryotic N-terminal methylation motif~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1332 Toce_1333 Toce_1333 Toce_1333 1289838 1290287 - conserved hypothetical protein InterPro IPR012902~KEGG: dae:Dtox_2705 hypothetical protein~SPTR: N-terminal methylation protein%3B~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1333 Toce_1334 Toce_1334 Toce_1334 1290322 1290672 - conserved hypothetical protein InterPro IPR012902:IPR001120:IPR000983~KEGG: tit:Thit_1059 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Prokaryotic N-terminal methylation motif%3B Bacterial type II secretion system protein G~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1334 Toce_1335 Toce_1335 Toce_1335 1290691 1291824 - Type II secretion system F domain protein COGs: COG1459 Type II secretory pathway component PulF~InterPro IPR018076:IPR003004~KEGG: tte:TTE1264 general secretory pathway protein F~PFAM: Type II secretion system F domain~SPTR: General secretory pathway protein F%3B~PFAM: Bacterial type II secretion system protein F domain gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1335 Toce_1336 Toce_1336 Toce_1336 1291917 1293635 - type II secretion system protein E COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB~InterPro IPR007831:IPR001482~KEGG: amt:Amet_3482 type II secretion system protein E~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein~SPTR: Type II secretion system protein E%3B~PFAM: Type II/IV secretion system protein%3B GSPII_E N-terminal domain~TIGRFAM: general secretory pathway protein E gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1336 Toce_1337 Toce_1337 Toce_1337 1293689 1294195 - HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668 COGs: COG2179 hydrolase of the HAD superfamily~InterPro IPR010021:IPR006549:IPR005834~KEGG: tte:TTE1260 HAD superfamily hydrolase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: HAD superfamily (Subfamily IIIA) phosphatase%2C TIGR01668%3B~TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668%3B hydrolase%2C HAD-superfamily%2C subfamily IIIA~PFAM: Protein of unknown function~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIIA%3B HAD superfamily (subfamily IIIA) phosphatase%2C TIGR01668 gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1337 Toce_1338 Toce_1338 Toce_1338 1294253 1294972 - RNA polymerase%2C sigma 27/28 subunit%2C RpsK/SigK COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterProIPR014209:IPR014284:IPR007627:IPR007630:IPR 016263:IPR000943~KEGG: tpd:Teth39_1064 sporulation sigma factor SigK~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma-K factor%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-K factor gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1338 Toce_1339 Toce_1339 Toce_1339 1295035 1296639 - penicillin-binding protein transpeptidase COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2~InterPro IPR005311:IPR001460~KEGG: tit:Thit_1052 peptidoglycan glycosyltransferase~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerisation domain~SPTR: Peptidoglycan glycosyltransferase%3B~PFAM: Penicillin binding protein transpeptidase domain%3B Penicillin-binding Protein dimerisation domain gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1339 Toce_1340 Toce_1340 Toce_1340 1296751 1297827 - aminodeoxychorismate lyase COGs: COG1559 periplasmic solute-binding protein~InterPro IPR003770~KEGG: mta:Moth_1637 aminodeoxychorismate lyase~PFAM: aminodeoxychorismate lyase~SPTR: Putative uncharacterized protein%3B~PFAM: YceG-like family~TIGRFAM: conserved hypothetical protein TIGR00247 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1340 Toce_1341 Toce_1341 Toce_1341 1297842 1298318 - protein of unknown function DUF988 COGs: COG4708 membrane protein~InterPro IPR010387~KEGG: aco:Amico_1003 protein of unknown function DUF988~PFAM: protein of unknown function DUF988~SPTR: Putative uncharacterized protein%3B~PFAM: QueT transporter gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1341 Toce_1342 Toce_1342 Toce_1342 1298806 1301511 + ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC COGs: COG0474 Cation transport ATPase~InterProIPR001757:IPR004014:IPR008250:IPR005834:IPR 006068:IPR018303:IPR000695~KEGG: tpd:Teth39_0231 calcium-translocating P-type ATPase%2C PMCA-type~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Calcium-translocating P-type ATPase%2C PMCA-type%3B~TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase%3B Cation transporting ATPase%2C C-terminus%3B Cation transporter/ATPase%2C N-terminus%3B haloacid dehalogenase-like hydrolase~TIGRFAM: plasma-membrane calcium-translocating P-type ATPase%3B golgi membrane calcium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B potassium and/or sodium efflux P-type ATPase%2C fungal-type gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1342 Toce_1343 Toce_1343 Toce_1343 1301551 1302018 - ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: tit:Thit_1045 ferric uptake regulator%2C Fur family~PFAM: ferric-uptake regulator~SPTR: Ferric uptake regulator%2C Fur family%3B~PFAM: Ferric uptake regulator family gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1343 Toce_1344 Toce_1344 Toce_1344 1302184 1302924 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: hor:Hore_14750 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: ABC transporter%2C permease protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1344 Toce_1345 Toce_1345 Toce_1345 1302921 1303670 - ABC transporter related protein COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003439:IPR003593:IPR017871~KEGG: hor:Hore_14760 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Taurine ABC transporter%2C ATP-binding protein%3B~PFAM: ABC transporter gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1345 Toce_1346 Toce_1346 Toce_1346 1303690 1304661 - extracellular solute-binding protein family 3 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR001638~KEGG: hor:Hore_14770 NlpA lipoprotein~SMART: extracellular solute-binding protein family 3~SPTR: Putative ABC transporter%2C periplasmic substrate-binding protein%3B~PFAM: NMT1/THI5 like gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1346 Toce_1347 Toce_1347 Toce_1347 1304645 1305253 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase~InterPro IPR004507:IPR003382~KEGG: bpf:BpOF4_15410 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: flavoprotein~SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase%3B~TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: Flavoprotein~TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1347 Toce_1348 Toce_1348 Toce_1348 1305258 1306154 - 4-hydroxybenzoate polyprenyltransferase COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase~InterPro IPR006371:IPR000537~KEGG: gym:GYMC10_0625 4-hydroxybenzoate polyprenyltransferase~PFAM: UbiA prenyltransferase~SPTR: 4-hydroxybenzoate polyprenyltransferase%3B~TIGRFAM: 4-hydroxybenzoate polyprenyltransferase~PFAM: UbiA prenyltransferase family~TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1348 Toce_1349 Toce_1349 Toce_1349 1306144 1307577 - 3-octaprenyl-4hydroxybenzoate decarboxylase COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase~InterPro IPR002830~KEGG: hor:Hore_14820 UbiD family decarboxylase~PFAM: Carboxylyase-related protein~SPTR: UbiD family decarboxylase%3B~TIGRFAM: UbiD family decarboxylase~PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~TIGRFAM: UbiD family decarboxylases gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1349 Toce_1350 Toce_1350 Toce_1350 1307821 1309296 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1350 Toce_1351 Toce_1351 Toce_1351 1309456 1309752 - protein of unknown function DUF1292 InterPro IPR009711~KEGG: tte:TTE1251 hypothetical protein~PFAM: protein of unknown function DUF1292~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1292) gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1351 Toce_1352 Toce_1352 Toce_1352 1309790 1310227 - Holliday junction resolvase YqgF COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)~InterPro IPR005227:IPR006641~KEGG: btl:BALH_3971 Holliday junction resolvase-like protein~PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0081)~TIGRFAM: conserved hypothetical protein TIGR00250 gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1352 Toce_1353 Toce_1353 Toce_1353 1310244 1311191 - aldo/keto reductase COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase)~InterPro IPR001395:IPR017896:IPR017900:IPR020471~KEGG: cth:Cthe_0152 aldo/keto reductase~PFAM: aldo/keto reductase~SPTR: Aldo/keto reductase%3B~PFAM: Aldo/keto reductase family gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1353 Toce_1354 Toce_1354 Toce_1354 1311222 1311482 - protein of unknown function DUF965 COGs: COG4472 conserved hypothetical protein~InterPro IPR009309~KEGG: dae:Dtox_2267 protein of unknown function DUF965~PFAM: protein of unknown function DUF965~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF965) gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1354 Toce_1355 Toce_1355 Toce_1355 1311568 1314210 - alanyl-tRNA synthetase COGs: COG0013 Alanyl-tRNA synthetase~InterProIPR002318:IPR018164:IPR012947:IPR003156:IPR 018165:IPR000215~KEGG: hmo:HM1_0530 alanyl-tRNA synthetase~PFAM: Alanyl-tRNA synthetase%2C class IIc-like%3B Threonyl/alanyl tRNA synthetase SAD%3B phosphoesterase DHHA1~SPTR: Alanyl-tRNA synthetase%3B~TIGRFAM: alanyl-tRNA synthetase~PFAM: DHHA1 domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetases class II (A)~TIGRFAM: alanyl-tRNA synthetase gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1355 Toce_1356 Toce_1356 Toce_1356 1314274 1314714 - positive regulator of sigma(E)%2C RseC/MucC COGs: COG3086 Positive regulator of sigma E activity~InterPro IPR007359~KEGG: tpd:Teth39_1571 positive regulator of sigma E%2C RseC/MucC~PFAM: Positive regulator of sigma(E) RseC/MucC~SPTR: Positive regulator of sigma E%2C RseC/MucC%3B~PFAM: Positive regulator of sigma(E)%2C RseC/MucC gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1356 Toce_1357 Toce_1357 Toce_1357 1314731 1315018 - protein of unknown function DUF156 COGs: COG1937 conserved hypothetical protein~InterPro IPR003735~KEGG: dhd:Dhaf_3585 protein of unknown function DUF156~PFAM: protein of unknown function DUF156~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C COG1937 gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1357 Toce_1358 Toce_1358 Toce_1358 1315337 1317112 - aspartyl-tRNA synthetase COGs: COG0173 Aspartyl-tRNA synthetase~InterProIPR004524:IPR004365:IPR004364:IPR004115:IPR 006195:IPR002312~KEGG: ate:Athe_0593 aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type%3B GAD domain protein~SPTR: Aspartyl-tRNA synthetase%3B~TIGRFAM: aspartyl-tRNA synthetase~PFAM: GAD domain%3B tRNA synthetases class II (D%2C K and N)%3B OB-fold nucleic acid binding domain~TIGRFAM: aspartyl-tRNA synthetase%2C bacterial type gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1358 Toce_1359 Toce_1359 Toce_1359 1317115 1318386 - histidyl-tRNA synthetase COGs: COG0124 Histidyl-tRNA synthetase~InterProIPR015807:IPR002314:IPR004154:IPR004516:IPR 006195~KEGG: tte:TTE1230 histidyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein~PRIAM: Histidine--tRNA ligase~SPTR: Histidyl-tRNA synthetase%3B~TIGRFAM: histidyl-tRNA synthetase~PFAM: Anticodon binding domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)~TIGRFAM: histidyl-tRNA synthetase gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1359 Toce_1360 Toce_1360 Toce_1360 1318594 1319766 + HtrA2 peptidase COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain~InterPro IPR001254:IPR001478:IPR001940~KEGG: dae:Dtox_0986 HtrA2 peptidase~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein~PRIAM: HtrA2 peptidase~SMART: PDZ/DHR/GLGF domain protein~SPTR: HtrA2 peptidase%3B~PFAM: Trypsin%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: periplasmic serine protease%2C Do/DeqQ family gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1360 Toce_1361 Toce_1361 Toce_1361 1319782 1319997 - conserved hypothetical protein KEGG: ath:AT5G41960 hypothetical protein~SPTR: At5g41960 gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1361 Toce_1362 Toce_1362 Toce_1362 1320050 1320670 - beta-lactamase domain protein COGs: COG0491 Zn-dependent hydrolase including glyoxylase~KEGG: dae:Dtox_2285 beta-lactamase domain protein~SPTR: Beta-lactamase domain protein%3B~PFAM: Metallo-beta-lactamase superfamily gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1362 Toce_1363 Toce_1363 Toce_1363 1320682 1321131 - D-tyrosyl-tRNA(Tyr) deacylase COGs: COG1490 D-Tyr-tRNAtyr deacylase~InterPro IPR003732~KEGG: cth:Cthe_1343 D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase~SPTR: D-tyrosyl-tRNA(Tyr) deacylase%3B~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-Tyr-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1363 Toce_1364 Toce_1364 Toce_1364 1321142 1323307 - (p)ppGpp synthetase I%2C SpoT/RelA COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase~InterProIPR004811:IPR006674:IPR007685:IPR004095:IPR 002912:IPR003607~KEGG: tpd:Teth39_1028 (p)ppGpp synthetase I%2C SpoT/RelA~PFAM: RelA/SpoT domain protein%3B metal-dependent phosphohydrolase HD sub domain%3B TGS domain protein%3B amino acid-binding ACT domain protein~PRIAM: GTP diphosphokinase~SMART: metal-dependent phosphohydrolase HD region~SPTR: (P)ppGpp synthetase I%2C SpoT/RelA%3B~TIGRFAM: RelA/SpoT family protein~PFAM: HD domain%3B ACT domain%3B TGS domain%3B Region found in RelA / SpoT proteins~TIGRFAM: (p)ppGpp synthetase%2C RelA/SpoT family gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1364 Toce_1365 Toce_1365 Toce_1365 1323332 1323844 - adenine phosphoribosyltransferase COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein~InterPro IPR005764:IPR000836~KEGG: cno:NT01CX_1843 adenine phosphoribosyltransferase~PFAM: phosphoribosyltransferase~SPTR: Adenine phosphoribosyltransferase%3B~TIGRFAM: adenine phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: adenine phosphoribosyltransferase gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1365 Toce_1366 Toce_1366 Toce_1366 1323844 1326408 - single-stranded-DNA-specific exonuclease RecJ COGs: COG0608 Single-stranded DNA-specific exonuclease~InterPro IPR004610:IPR001667:IPR003156~KEGG: tte:TTE1191 single-stranded DNA-specific exonuclease~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~SPTR: Single-stranded-DNA-specific exonuclease RecJ%3B~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ~PFAM: DHH family%3B DHHA1 domain~TIGRFAM: single-stranded-DNA-specific exonuclease RecJ gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1366 Toce_1367 Toce_1367 Toce_1367 1326480 1328126 - von Willebrand factor type A COGs: COG1240 Mg-chelatase subunit ChlD~InterPro IPR002035~KEGG: nth:Nther_2026 von Willebrand factor type A~PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~SPTR: Von Willebrand factor%2C type A%3B~PFAM: von Willebrand factor type A domain gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1367 Toce_1368 Toce_1368 Toce_1368 1328123 1329406 - Magnesium chelatase COGs: COG1239 Mg-chelatase subunit ChlI~InterPro IPR003593~KEGG: sth:STH2441 putative chelatase~PRIAM: Magnesium chelatase~SMART: AAA ATPase~SPTR: Putative chelatase gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1368 Toce_1369 Toce_1369 Toce_1369 1329511 1330986 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1369 Toce_1370 Toce_1370 Toce_1370 1331106 1331960 - protein-export membrane protein SecF COGs: COG0341 Preprotein translocase subunit SecF~InterPro IPR005665:IPR003335~KEGG: ctc:CTC02203 preprotein translocase subunit SecF~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Protein translocase subunit secF%3B~TIGRFAM: protein-export membrane protein SecF%3B protein-export membrane protein%2C SecD/SecF family~PFAM: Protein export membrane protein%3B SecD/SecF GG Motif~TIGRFAM: protein-export membrane protein%2C SecD/SecF family%3B protein-export membrane protein SecF gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1370 Toce_1371 Toce_1371 Toce_1371 1331991 1333232 - protein-export membrane protein SecD COGs: COG0342 Preprotein translocase subunit SecD~InterPro IPR005791:IPR003335~KEGG: tpd:Teth39_1023 preprotein translocase subunit SecD~PFAM: SecD/SecF/SecDF export membrane protein~SPTR: Protein-export membrane protein SecD%3B~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family~PFAM: Protein export membrane protein%3B SecD/SecF GG Motif~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1371 Toce_1372 Toce_1372 Toce_1372 1333339 1333491 - conserved hypothetical protein KEGG: cth:Cthe_0907 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1372 Toce_1373 Toce_1373 Toce_1373 1333573 1333956 - conserved hypothetical protein KEGG: tte:TTE1185 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1373 Toce_1374 Toce_1374 Toce_1374 1334031 1334315 - protein translocase subunit yajC COGs: COG1862 Preprotein translocase subunit YajC~InterPro IPR003849~KEGG: tte:TTE1184 preprotein translocase subunit YajC~PFAM: YajC family protein~SPTR: Preprotein translocase subunit YajC%3B~TIGRFAM: preprotein translocase%2C YajC subunit~PFAM: Preprotein translocase subunit~TIGRFAM: preprotein translocase%2C YajC subunit gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1374 Toce_1375 Toce_1375 Toce_1375 1334393 1335508 - tRNA-guanine transglycosylase COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase~InterPro IPR004803:IPR002616~KEGG: tex:Teth514_1457 queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase~PRIAM: tRNA-guanine transglycosylase~SPTR: Queuine tRNA-ribosyltransferase%3B~TIGRFAM: queuine tRNA-ribosyltransferase%3B tRNA-guanine transglycosylase%2C various specificities~PFAM: Queuine tRNA-ribosyltransferase~TIGRFAM: tRNA-guanine transglycosylases%2C various specificities%3B tRNA-guanine transglycosylase%2C queuosine-34-forming gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1375 Toce_1376 Toce_1376 Toce_1376 1335505 1335951 - hypothetical protein KEGG: tpd:Teth39_0440 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1376 Toce_1377 Toce_1377 Toce_1377 1335963 1336988 - S-adenosylmethionine--tRNA ribosyltransferase-isomerase COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)~InterPro IPR003699~KEGG: tpd:Teth39_1016 S-adenosylmethionine:tRNA ribosyltransferase-isomerase~PFAM: Queuosine biosynthesis protein~SPTR:S-adenosylmethionine/tRNA-ribosyltransferase-i somerase%3B~TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase~PFAM: Queuosine biosynthesis protein~TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1377 Toce_1378 Toce_1378 Toce_1378 1337009 1338379 - SpoIID/LytB domain protein COGs: COG2385 Sporulation protein and related protein~InterPro IPR013486:IPR013693~KEGG: tit:Thit_1008 SpoIID/LytB domain protein~PFAM: Stage II sporulation D domain protein~SPTR: SpoIID/LytB domain protein%3B~TIGRFAM: SpoIID/LytB domain protein~PFAM: Stage II sporulation protein~TIGRFAM: SpoIID/LytB domain gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1378 Toce_1379 Toce_1379 Toce_1379 1338393 1338605 - conserved hypothetical protein KEGG: tit:Thit_1007 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2905) gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1379 Toce_1380 Toce_1380 Toce_1380 1338607 1339623 - Holliday junction DNA helicase subunit RuvB COGs: COG2255 Holliday junction resolvasome helicase subunit~InterProIPR004605:IPR008824:IPR003959:IPR008823:IPR 003593~KEGG: nth:Nther_1796 Holliday junction DNA helicase subunit RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain~SMART: AAA ATPase~SPTR: Holliday junction DNA helicase RuvB%3B~TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: Holliday junction DNA helicase ruvB C-terminus%3B Holliday junction DNA helicase ruvB N-terminus~TIGRFAM: Holliday junction DNA helicase%2C RuvB subunit gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1380 Toce_1381 Toce_1381 Toce_1381 1339637 1340215 - Holliday junction DNA helicase RuvA COGs: COG0632 Holliday junction resolvasome DNA-binding subunit~InterPro IPR000085:IPR013849:IPR011114:IPR003583~KEGG: tit:Thit_1005 Holliday junction DNA helicase RuvA~PFAM: DNA recombination protein RuvA domain I%3B RuvA domain protein~SPTR: Holliday junction DNA helicase RuvA%3B~TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: RuvA%2C C-terminal domain%3B RuvA N terminal domain~TIGRFAM: Holliday junction DNA helicase%2C RuvA subunit gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1381 Toce_1382 Toce_1382 Toce_1382 1340228 1340761 - crossover junction endodeoxyribonuclease RuvC COGs: COG0817 Holliday junction resolvasome endonuclease subunit~InterPro IPR002176:IPR020563~KEGG: cth:Cthe_0180 Holliday junction resolvase~PFAM: Crossover junction endodeoxyribonuclease RuvC~PRIAM: Crossover junction endodeoxyribonuclease~SPTR: Crossover junction endodeoxyribonuclease RuvC%3B~TIGRFAM: crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1382 Toce_1383 Toce_1383 Toce_1383 1340827 1341381 - hypothetical protein KEGG: tte:TTE1137 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unkown function (DUF1901) gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1383 Toce_1384 Toce_1384 Toce_1384 1341447 1342175 - protein of unknown function DUF28 COGs: COG0217 conserved hypothetical protein~InterPro IPR002876~KEGG: tpd:Teth39_1009 hypothetical protein~PFAM: protein of unknown function DUF28~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function DUF28~TIGRFAM: conserved hypothetical protein TIGR01033 gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1384 Toce_1385 Toce_1385 Toce_1385 1342275 1342988 - NH(3)-dependent NAD(+) synthetase COGs: COG0171 NAD synthase~InterPro IPR003694~KEGG: hor:Hore_19030 NH(3)-dependent NAD(+) synthetase~SPTR: NH(3)-dependent NAD(+) synthetase%3B~TIGRFAM: NAD+ synthetase~PFAM: NAD synthase~TIGRFAM: NAD+ synthetase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1385 Toce_1386 Toce_1386 Toce_1386 1343008 1343673 - protein of unknown function UPF0029 COGs: COG1739 conserved hypothetical protein~InterPro IPR015796:IPR001498:IPR015269~KEGG: cth:Cthe_2078 hypothetical protein~PFAM: protein of unknown function UPF0029%3B Domain of unknown function DUF1949~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein family UPF0029%3B Domain of unknown function (DUF1949)~TIGRFAM: conserved hypothetical protein TIGR00257 gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1386 Toce_1387 Toce_1387 Toce_1387 1343781 1344467 - spore cortex-lytic enzyme COGs: COG3773 Cell wall hydrolyses involved in spore germination~InterPro IPR014224:IPR002477:IPR011105~KEGG: dhd:Dhaf_4849 spore cortex-lytic enzyme~PFAM: cell wall hydrolase SleB%3B Peptidoglycan-binding domain 1 protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: spore cortex-lytic enzyme~PFAM: Putative peptidoglycan binding domain%3B Cell Wall Hydrolase~TIGRFAM: spore cortex-lytic enzyme gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1387 Toce_1388 Toce_1388 Toce_1388 1350314 1350967 - sporulation protein YunB InterPro IPR014197:IPR019061~KEGG: nth:Nther_1810 sporulation protein YunB~PFAM: Sporulation protein YunB-like~SPTR: Sporulation protein YunB%3B~TIGRFAM: sporulation protein YunB~PFAM: Sporulation protein YunB (Spo_YunB)~TIGRFAM: sporulation protein YunB gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1388 Toce_1389 Toce_1389 Toce_1389 1351024 1352226 - tyrosyl-tRNA synthetase COGs: COG0162 Tyrosyl-tRNA synthetase~InterPro IPR002307:IPR002305:IPR002942:IPR001412~KEGG: pth:PTH_1020 tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~SPTR: Tyrosyl-tRNA synthetase%3B~TIGRFAM: tyrosyl-tRNA synthetase~PFAM: S4 domain%3B tRNA synthetases class I (W and Y)~TIGRFAM: tyrosyl-tRNA synthetase gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1389 Toce_1390 Toce_1390 Toce_1390 1352389 1354869 + penicillin-binding protein%2C 1A family COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein)~InterPro IPR011816:IPR001264:IPR001460:IPR002119~KEGG: chy:CHY_1563 1A family penicillin-binding protein~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase~SPTR: Penicillin-binding protein%2C 1A family%3B~TIGRFAM: penicillin-binding protein%2C 1A family~PFAM: Penicillin binding protein transpeptidase domain%3B Transglycosylase~TIGRFAM: penicillin-binding protein%2C 1A family gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1390 Toce_1391 Toce_1391 Toce_1391 1354921 1355379 - protein of unknown function DUF523 COGs: COG1683 conserved hypothetical protein~InterPro IPR007553~KEGG: protein of unknown function DUF523~PFAM: protein of unknown function DUF523~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF523) gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1391 Toce_1392 Toce_1392 Toce_1392 1355376 1357748 - MutS2 family protein COGs: COG1193 Mismatch repair ATPase (MutS family)~InterPro IPR005747:IPR000432:IPR002625:IPR007696~KEGG: cth:Cthe_1014 MutS2 family protein~PFAM: Smr protein/MutS2%3B DNA mismatch repair protein MutS domain protein~SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein%3B Smr protein/MutS2~SPTR: MutS2 family protein%3B~TIGRFAM: MutS2 family protein~PFAM: MutS domain V%3B Smr domain~TIGRFAM: MutS2 family protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1392 Toce_1393 Toce_1393 Toce_1393 1357763 1360147 - peptidase U32 COGs: COG0826 Collagenase and related protease~InterPro IPR001539~KEGG: adg:Adeg_0544 peptidase U32~PFAM: peptidase U32~SPTR: Peptidase U32%3B~PFAM: Collagenase%3B Peptidase family U32 gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1393 Toce_1394 Toce_1394 Toce_1394 1360180 1361898 - PHP domain protein COGs: COG1796 DNA polymerase IV (family X)~InterProIPR004013:IPR002054:IPR003583:IPR003141:IPR 002008~KEGG: gbm:Gbem_0265 PHP domain protein~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein%3B DNA polymerase X%3B Helix-hairpin-helix DNA-binding class 1~SPTR: PHP domain protein%3B~PFAM: PHP domain gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1394 Toce_1395 Toce_1395 Toce_1395 1361918 1362181 - cell division protein ZapA InterPro IPR007838~KEGG: gyc:GYMC61_0821 protein of unknown function DUF710~PFAM: protein of unknown function DUF710~SPTR: Putative uncharacterized protein%3B~PFAM: Cell division protein ZapA gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1395 Toce_1396 Toce_1396 Toce_1396 1362202 1364601 - phenylalanyl-tRNA synthetase beta subunit COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit~InterProIPR004532:IPR002547:IPR005146:IPR005147:IPR 005121~KEGG: tit:Thit_1516 phenylalanyl-tRNA synthetase%2C beta subunit~PFAM: B3/4 domain protein%3B t-RNA-binding domain protein%3B tRNA synthetase B5%3B ferredoxin-fold anticodon-binding~PRIAM: Phenylalanine--tRNA ligase~SPTR: Phenylalanyl-tRNA synthetase%2C beta subunit%3B~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit~PFAM: tRNA synthetases class II core domain (F)%3B tRNA synthetase B5 domain%3B B3/4 domain%3B Ferredoxin-fold anticodon binding domain%3B Putative tRNA binding domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit%2C non-spirochete bacterial gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1396 Toce_1397 Toce_1397 Toce_1397 1364619 1365635 - phenylalanyl-tRNA synthetase%2C alpha subunit COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit~InterPro IPR004529:IPR004188:IPR002319:IPR006195~KEGG: tpd:Teth39_0771 phenylalanyl-tRNA synthetase subunit alpha~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein~SPTR: Phenylalanyl-tRNA synthetase%2C alpha subunit%3B~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: tRNA synthetases class II core domain (F)%3B Aminoacyl tRNA synthetase class II%2C N-terminal domain~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1397 Toce_1398 Toce_1398 Toce_1398 1366054 1366851 - RNA methyltransferase%2C TrmH family%2C group 3 COGs: COG0566 rRNA methylase~InterPro IPR004441:IPR013123:IPR001537~KEGG: cth:Cthe_1222 RNA methyltransferase~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~SPTR: RNA methyltransferase%2C TrmH family%2C group 3%3B~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding~TIGRFAM: rRNA methylase%2C putative%2C group 3 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1398 Toce_1399 Toce_1399 Toce_1399 1366848 1367498 - TrkA-N domain protein COGs: COG0569 K+ transport systems NAD-binding component~InterPro IPR003148:IPR006037~KEGG: pjd:Pjdr2_1122 TrkA-N domain protein~PFAM: TrkA-N domain protein%3B TrkA-C domain protein~SPTR: TrkA-N domain protein%3B~PFAM: TrkA-N domain%3B TrkA-C domain gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1399 Toce_1400 Toce_1400 Toce_1400 1367513 1368163 - TrkA-N domain protein COGs: COG0569 K+ transport systems NAD-binding component~InterPro IPR003148:IPR006037~KEGG: amt:Amet_1637 TrkA domain-containing protein~PFAM: TrkA-N domain protein%3B TrkA-C domain protein~SPTR: TrkA-N domain protein%3B~PFAM: TrkA-N domain%3B TrkA-C domain gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1400 Toce_1401 Toce_1401 Toce_1401 1368182 1369501 - potassium uptake protein%2C TrkH family COGs: COG0168 Trk-type K+ transport systems membrane components~InterPro IPR004772:IPR003445~KEGG: tpd:Teth39_2062 TrkH family potassium uptake protein~PFAM: cation transporter~PRIAM: H(+)-transporting two-sector ATPase~SPTR: Potassium uptake protein%2C TrkH family%3B~TIGRFAM: potassium uptake protein%2C TrkH family~PFAM: Cation transport protein~TIGRFAM: potassium uptake protein%2C TrkH family gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1401 Toce_1402 Toce_1402 Toce_1402 1369574 1369930 - LSU ribosomal protein L20P COGs: COG0292 Ribosomal protein L20~InterPro IPR005813~KEGG: tte:TTE1691 50S ribosomal protein L20~PFAM: ribosomal protein L20~SPTR: 50S ribosomal protein L20%3B~TIGRFAM: ribosomal protein L20~PFAM: Ribosomal protein L20~TIGRFAM: ribosomal protein L20 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1402 Toce_1403 Toce_1403 Toce_1403 1369950 1370147 - LSU ribosomal protein L35P InterPro IPR001706:IPR021137:IPR018265~KEGG: amt:Amet_1634 ribosomal protein L35~PFAM: Ribosomal protein L35~SPTR: 50S ribosomal protein L35%3B~TIGRFAM: ribosomal protein L35~PFAM: Ribosomal protein L35~TIGRFAM: ribosomal protein L35 gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1403 Toce_1404 Toce_1404 Toce_1404 1370154 1370732 - bacterial translation initiation factor 3 (bIF-3) COGs: COG0290 Translation initiation factor 3 (IF-3)~InterPro IPR001288:IPR019814:IPR019815:IPR019813~KEGG: translation initiation factor IF-3~PFAM: Translation initiation factor 3-like~SPTR: Translation initiation factor IF-3%3B~TIGRFAM: translation initiation factor IF-3~PFAM: Translation initiation factor IF-3%2C C-terminal domain%3B Translation initiation factor IF-3%2C N-terminal domain~TIGRFAM: translation initiation factor IF-3 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1404 Toce_1405 Toce_1405 Toce_1405 1370881 1372794 - Ser-tRNA(Thr) hydrolase%3B threonyl-tRNA synthetase COGs: COG0441 Threonyl-tRNA synthetase~InterProIPR002320:IPR004095:IPR012947:IPR002314:IPR 004154:IPR006195:IPR018158~KEGG: tte:TTE1713 threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Threonyl/alanyl tRNA synthetase SAD%3B TGS domain protein%3B Anticodon-binding domain protein~SPTR: Threonyl-tRNA synthetase%3B~TIGRFAM: threonyl-tRNA synthetase~PFAM: Anticodon binding domain%3B Threonyl and Alanyl tRNA synthetase second additional domain%3B tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%3B TGS domain~TIGRFAM: threonyl-tRNA synthetase gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1405 Toce_1406 Toce_1406 Toce_1406 1372936 1373067 - hypothetical protein gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1406 Toce_1407 Toce_1407 Toce_1407 1373071 1373805 - protein of unknown function DUF445 COGs: COG4399 conserved hypothetical protein~InterPro IPR007383~KEGG: aoe:Clos_1981 putative membrane protin~PFAM: protein of unknown function DUF445~SPTR: Putative membrane protin%3B~PFAM: Protein of unknown function (DUF445) gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1407 Toce_1408 Toce_1408 Toce_1408 1373814 1377771 - pseudogene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1408 Toce_1409 Toce_1409 Toce_1409 1375063 1375793 - pseudogene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1409 Toce_1410 Toce_1410 Toce_1410 1375787 1377310 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1410 Toce_1411 Toce_1411 Toce_1411 1377891 1378748 - Sporulation protein YtxC InterPro IPR014199~KEGG: dae:Dtox_2403 sporulation protein YtxC~PFAM: Sporulation protein YtxC~SPTR: Putative uncharacterized protein%3B~PFAM: YtxC-like family~TIGRFAM: putative sporulation protein YtxC gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1411 Toce_1412 Toce_1412 Toce_1412 1379252 1379788 - hypothetical protein KEGG: cbf:CLI_0537 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1412 Toce_1413 Toce_1413 Toce_1413 1379932 1380945 - hypothetical protein KEGG: cdi:DIP2249 putative nitric-oxide reductase~SPTR: Putative uncharacterized protein gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1413 Toce_1414 Toce_1414 Toce_1414 1381197 1381307 + hypothetical protein gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1414 Toce_1415 Toce_1415 Toce_1415 1382462 1382716 - small%2C acid-soluble spore protein%2C alpha/be KEGG: tte:TTE1773 small%2C acid-soluble spore proteins%2C alpha/be~SPTR: Small%2C acid-soluble spore proteins%2C alpha/be%3B~PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1415 Toce_1416 Toce_1416 Toce_1416 1382849 1383940 - histidinol-phosphate aminotransferase COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~InterPro IPR005861:IPR004839~KEGG: tit:Thit_1818 histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II~SPTR: Histidinol-phosphate aminotransferase%3B~TIGRFAM: histidinol-phosphate aminotransferase~PFAM: Aminotransferase class I and II~TIGRFAM: histidinol-phosphate aminotransferase gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1416 Toce_1417 Toce_1417 Toce_1417 1384114 1384338 + nitrogen-fixing NifU domain protein COGs: COG0694 Thioredoxin-like protein and domains~InterPro IPR001075~KEGG: hor:Hore_03110 nitrogen-fixing NifU domain protein~PFAM: nitrogen-fixing NifU domain protein~SPTR: Nitrogen-fixing NifU domain protein%3B~PFAM: NifU-like domain gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1417 Toce_1418 Toce_1418 Toce_1418 1384386 1385858 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1418 Toce_1419 Toce_1419 Toce_1419 1385980 1386603 - alpha-ribazole phosphatase COGs: COG0406 Fructose-2 6-bisphosphatase~InterPro IPR017578:IPR013078:IPR001345~KEGG: adg:Adeg_1465 alpha-ribazole phosphatase~PFAM: Phosphoglycerate mutase~SPTR: Alpha-ribazole phosphatase%3B~TIGRFAM: alpha-ribazole phosphatase~PFAM: Phosphoglycerate mutase family~TIGRFAM: alpha-ribazole phosphatase gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1419 Toce_1420 Toce_1420 Toce_1420 1386731 1387468 - cobalamin 5'-phosphate synthase COGs: COG0368 Cobalamin-5-phosphate synthase~InterPro IPR003805~KEGG: dae:Dtox_3090 cobalamin 5'-phosphate synthase~PFAM: cobalamin-5-phosphate synthase CobS~SPTR: Cobalamin 5'-phosphate synthase%3B~TIGRFAM: cobalamin 5'-phosphate synthase~PFAM: Cobalamin-5-phosphate synthase~TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1420 Toce_1421 Toce_1421 Toce_1421 1387555 1388517 - cobalamin biosynthesis protein CobD COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB~InterPro IPR004485~KEGG: dae:Dtox_3092 cobalamin biosynthesis protein CobD~PFAM: cobalamin biosynthesis protein CbiB~SPTR: Cobalamin biosynthesis protein CobD%3B~TIGRFAM: cobalamin biosynthesis protein CobD~PFAM: CobD/Cbib protein~TIGRFAM: cobalamin biosynthesis protein CobD gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1421 Toce_1422 Toce_1422 Toce_1422 1388531 1389646 - L-threonine-O-3-phosphate decarboxylase COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase~InterPro IPR005860:IPR004839:IPR004838~KEGG: cpe:CPE1040 threonine-phosphate decarboxylase~PFAM: aminotransferase class I and II~SPTR: Putative L-threonine-O-3-phosphate decarboxylase%3B~TIGRFAM: L-threonine-O-3-phosphate decarboxylase~PFAM: Aminotransferase class I and II~TIGRFAM: L-threonine-O-3-phosphate decarboxylase%3B histidinol-phosphate aminotransferase gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1422 Toce_1423 Toce_1423 Toce_1423 1389643 1390545 - GHMP kinase COGs: COG4542 Protein involved in propanediol utilization and related protein (includes coumermycin biosynthetic protein) possible kinase~InterPro IPR006204:IPR013750:IPR012363~KEGG: mta:Moth_1103 GHMP kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein~SPTR: GHMP kinase%3B~PFAM: GHMP kinases C terminal%3B GHMP kinases N terminal domain gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1423 Toce_1424 Toce_1424 Toce_1424 1390574 1391131 - Adenosylcobinamide-phosphateguanylyltransferase COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase~InterPro IPR003203~KEGG: aoe:Clos_2210 adenosylcobinamide-phosphate guanylyltransferase~PFAM: cobalbumin biosynthesis protein~PRIAM: Adenosylcobinamide-phosphate guanylyltransferase~SPTR: Adenosylcobinamide kinase%3B~PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1424 Toce_1425 Toce_1425 Toce_1425 1391157 1392203 - transport system permease protein COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component~InterPro IPR000522~KEGG: aoe:Clos_0916 transport system permease protein~PFAM: transport system permease protein~SPTR: Transport system permease protein%3B~PFAM: FecCD transport family gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1425 Toce_1426 Toce_1426 Toce_1426 1392217 1393167 - periplasmic binding protein COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component~InterPro IPR002491~KEGG: dau:Daud_1317 periplasmic binding protein~PFAM: periplasmic binding protein~SPTR: Periplasmic binding protein%3B~PFAM: Periplasmic binding protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1426 Toce_1427 Toce_1427 Toce_1427 1393496 1395223 - phosphoenolpyruvate--protein phosphotransferase COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component)~InterProIPR006318:IPR008731:IPR008279:IPR000121:IPR 018274~KEGG: tte:TTE2334 phosphoenolpyruvate-protein kinase~PFAM: PEP-utilizing protein%3B PEP-utilising protein domain protein%3B PEP-utilising protein mobile region~PRIAM: Phosphoenolpyruvate--protein phosphotransferase~SPTR: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)%3B~TIGRFAM: phosphoenolpyruvate-protein phosphotransferase~PFAM: PEP-utilising enzyme%2C TIM barrel domain%3B PEP-utilising enzyme%2C mobile domain%3B PEP-utilising enzyme%2C N-terminal~TIGRFAM: phosphoenolpyruvate-protein phosphotransferase gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1427 Toce_1428 Toce_1428 Toce_1428 1395252 1395566 - conserved hypothetical protein KEGG: tte:TTE0189 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1428 Toce_1429 Toce_1429 Toce_1429 1395672 1397054 - dihydrolipoamide dehydrogenase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterProIPR006258:IPR013027:IPR004099:IPR012999:IPR 000815~KEGG: tit:Thit_1504 dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: Dihydrolipoyl dehydrogenase%3B~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain~TIGRFAM: dihydrolipoamide dehydrogenase gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1429 Toce_1430 Toce_1430 Toce_1430 1397084 1398382 - catalytic domain of components of various dehydrogenase complexes COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein~InterPro IPR000089:IPR004167:IPR001078~KEGG: tte:TTE0188 dihydrolipoamide acyltransferase~PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein~SPTR: 2-oxo acid dehydrogenases acyltransferase (Catalytic domain) protein%3B~PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)%3B e3 binding domain%3B Biotin-requiring enzyme~TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase%2C long form gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1430 Toce_1431 Toce_1431 Toce_1431 1398403 1399380 - Transketolase central region COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit~InterPro IPR005475:IPR005476~KEGG: tte:TTE0187 thiamine pyrophosphate-dependent dehydrogenase%2C E1 component beta subunit~PFAM: Transketolase central region%3B Transketolase domain protein~SPTR: Thiamine pyrophosphate-dependent dehydrogenases%2C E1 component beta subunit%3B~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1431 Toce_1432 Toce_1432 Toce_1432 1399410 1400369 - dehydrogenase E1 component COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit~InterPro IPR001017~KEGG: tte:TTE0186 thiamine pyrophosphate-dependent dehydrogenase%2C E1 component alpha subunit~PFAM: dehydrogenase E1 component~SPTR: Thiamine pyrophosphate-dependent dehydrogenases%2C E1 component alpha subunit%3B~PFAM: Dehydrogenase E1 component~TIGRFAM: pyruvate dehydrogenase E1 component%2C alpha subunit gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1432 Toce_1433 Toce_1433 Toce_1433 1400544 1401836 - SAF domain protein COGs: COG4091 homoserine dehydrogenase~InterPro IPR005106:IPR013974~KEGG: str:Sterm_3777 SAF domain protein~PFAM: SAF domain protein%3B homoserine dehydrogenase NAD-binding~SPTR: SAF domain protein%3B~PFAM: Homoserine dehydrogenase%2C NAD binding domain%3B SAF domain gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1433 Toce_1434 Toce_1434 Toce_1434 1401900 1402262 - PTS system glucitol/sorbitol-specific IIA component COGs: COG3731 Phosphotransferase system sorbitol-specific component IIA~InterPro IPR004716~KEGG: chl:Chy400_1450 PTS system glucitol/sorbitol-specific IIA component~PFAM: PTS system glucitol/sorbitol-specific IIA component~SPTR: PTS system glucitol/sorbitol-specific IIA component%3B~PFAM: PTS system glucitol/sorbitol-specific IIA component gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1434 Toce_1435 Toce_1435 Toce_1435 1402327 1403322 - Protein-N(pi)-phosphohistidine--sugarphosphotran sferase COGs: COG3732 Phosphotransferase system sorbitol-specific component IIBC~InterPro IPR011618:IPR011638~KEGG: bha:BH0772 PTS system%2C glucitol/sorbitol-specific enzyme II%2C BC component (EIIBC-GUT)~PFAM: Sorbitol phosphotransferase protein II domain protein~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: PTS system%2C glucitol/sorbitol-specific enzyme II%2C BC component (EIIBC-GUT)%3B~PFAM: Sorbitol phosphotransferase enzyme II C-terminus%3B Sorbitol phosphotransferase enzyme II N-terminus~TIGRFAM: PTS system%2C glucitol/sorbitol-specific%2C IIBC component gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1435 Toce_1436 Toce_1436 Toce_1436 1403335 1403859 - PTS system%2C glucitol/sorbitol-specific%2C IIC subunit COGs: COG3730 Phosphotransferase system sorbitol-specific component IIC~InterPro IPR004699~KEGG: bha:BH0771 PTS system%2C glucitol/sorbitol-specific enzyme II%2C C2 component (permease)~PFAM: PTS system protein II sorbitol-specific factor~SPTR: PTS system%2C glucitol/sorbitol-specific enzyme II%2C C2 component (Permease)%3B~TIGRFAM: PTS system%2C glucitol/sorbitol-specific%2C IIC subunit~PFAM: PTS system enzyme II sorbitol-specific factor~TIGRFAM: PTS system%2C glucitol/sorbitol-specific%2C IIC component gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1436 Toce_1437 Toce_1437 Toce_1437 1403920 1404285 - Glucitol operon activator COGs: COG4578 Glucitol operon activator~InterPro IPR009693~KEGG: cby:CLM_3883 glucitol operon activator protein~PFAM: Glucitol operon activator~SPTR: Glucitol operon activator protein%3B~PFAM: Glucitol operon activator protein (GutM) gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1437 Toce_1438 Toce_1438 Toce_1438 1404412 1405368 - transcriptional regulator%2C DeoR family COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain~InterPro IPR013249:IPR007324:IPR012318~KEGG: str:Sterm_3767 transcriptional regulator%2C DeoR family~PFAM: putative sugar-binding domain protein%3B Sigma-70 region 4 type 2~SPTR: Transcriptional regulator%2C DeoR family%3B~PFAM: Sigma-70%2C region 4%3B Putative sugar-binding domain gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1438 Toce_1439 Toce_1439 Toce_1439 1405534 1405701 + hypothetical protein KEGG: pth:PTH_1849 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1439 Toce_1440 Toce_1440 Toce_1440 1405733 1406380 - transaldolase COGs: COG0176 Transaldolase~InterPro IPR004731:IPR001585:IPR018225~KEGG: csc:Csac_2036 putative translaldolase~PFAM: Transaldolase~SPTR: Transaldolase%3B~TIGRFAM: transaldolase~PFAM: Transaldolase~TIGRFAM: transaldolase%2C putative%2C TalC family gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1440 Toce_1441 Toce_1441 Toce_1441 1406554 1407495 + L-lactate dehydrogenase COGs: COG0039 Malate/lactate dehydrogenase~InterPro IPR011304:IPR001236:IPR001557:IPR018177~KEGG: csc:Csac_1027 L-lactate dehydrogenase~PFAM: Lactate/malate dehydrogenase~SPTR: Malate dehydrogenase (NAD)%3B~TIGRFAM: L-lactate dehydrogenase~PFAM: lactate/malate dehydrogenase%2C alpha/beta C-terminal domain%3B lactate/malate dehydrogenase%2C NAD binding domain~TIGRFAM: L-lactate dehydrogenase gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1441 Toce_1442 Toce_1442 Toce_1442 1407559 1408590 - Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterPro IPR013154:IPR013149:IPR002328~KEGG: bmq:BMQ_3199 alcohol dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: Alcohol dehydrogenase GroES domain protein%3B~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase~TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1442 Toce_1443 Toce_1443 Toce_1443 1408609 1409646 - Alcohol dehydrogenase GroES domain protein COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase~InterPro IPR013154:IPR013149:IPR002328~KEGG: cdl:CDR20291_2213 putative galactitol-1-phosphate 5-dehydrogenase~PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~SPTR: Alcohol dehydrogenase GroES domain protein%3B~PFAM: Alcohol dehydrogenase GroES-like domain%3B Zinc-binding dehydrogenase gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1443 Toce_1444 Toce_1444 Toce_1444 1409809 1411149 - PTS system D-arabitol-specific IIC component%2C Gat family (TC 4.A.5.1.2) COGs: COG3775 Phosphotransferase system galactitol-specific IIC component~InterPro IPR013853:IPR004703:IPR013014~KEGG: cbe:Cbei_2500 PTS system galactitol-specific IIC component~PFAM: PTS system Galactitol-specific IIC component~SPTR: PTS system%2C galactitol-specific IIC subunit%3B~TIGRFAM: PTS system%2C galactitol-specific IIC subunit~PFAM: PTS system sugar-specific permease component~TIGRFAM: PTS system%2C galactitol-specific IIC component gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1444 Toce_1445 Toce_1445 Toce_1445 1411161 1411438 - pseudogene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1445 Toce_1446 Toce_1446 Toce_1446 1411480 1411953 - putative PTS IIA-like nitrogen-regulatory protein PtsN COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)~InterPro IPR002178~KEGG: tpd:Teth39_2081 putative PTS IIA-like nitrogen-regulatory protein PtsN~PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~SPTR: Putative PTS IIA-like nitrogen-regulatory protein PtsN%3B~manually curated~PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1446 Toce_1447 Toce_1447 Toce_1447 1412036 1414996 - PTS system transcriptional activator COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain~InterProIPR002078:IPR011608:IPR004701:IPR002178:IPR 003593:IPR003006:IPR002464~KEGG: tte:TTE0180 transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B PRD domain protein%3B PTS system fructose subfamily IIA component%3B phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2~SMART: AAA ATPase~SPTR: Sigma-54 interaction domain family protein%3B~PFAM: PTS system fructose IIA component%3B Sigma-54 interaction domain%3B PRD domain%3B Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1447 Toce_1448 Toce_1448 Toce_1448 1415164 1416984 - Excinuclease ABC subunit C COGs: COG0322 Nuclease subunit of the excinuclease complex~InterProIPR004791:IPR000305:IPR001943:IPR001162:IPR 003583~KEGG: dae:Dtox_3952 excinuclease ABC%2C C subunit~PFAM: excinuclease ABC C subunit domain protein%3B Excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein~SMART: Excinuclease ABC C subunit domain protein%3B Helix-hairpin-helix DNA-binding class 1~SPTR: Exconuclease ABC subunit C%3B~TIGRFAM: excinuclease ABC%2C C subunit~PFAM: UvrB/uvrC motif%3B UvrC Helix-hairpin-helix N-terminal%3B GIY-YIG catalytic domain~TIGRFAM: excinuclease ABC%2C C subunit gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1448 Toce_1449 Toce_1449 Toce_1449 1417027 1417401 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845:IPR018334~KEGG: tex:Teth514_1161 regulatory protein%2C ArsR~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Regulatory protein%2C ArsR%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1449 Toce_1450 Toce_1450 Toce_1450 1417488 1418057 - molybdopterin-guanine dinucleotide biosynthesis protein B COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein~InterPro IPR004435~KEGG: dhd:Dhaf_4097 molybdopterin-guanine dinucleotide biosynthesis protein B~SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B%3B~TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B~PFAM: Molybdopterin guanine dinucleotide synthesis protein B~TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1450 Toce_1451 Toce_1451 Toce_1451 1418209 1419597 - amino acid carrier protein COGs: COG1115 Na+/alanine symporter~InterPro IPR001463~KEGG: tex:Teth514_0910 amino acid carrier protein~PFAM: sodium:alanine symporter~SPTR: Amino acid carrier protein%3B~TIGRFAM: amino acid carrier protein~PFAM: Sodium:alanine symporter family~TIGRFAM: amino acid carrier protein gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1451 Toce_1452 Toce_1452 Toce_1452 1419882 1421429 + sigma54 specific transcriptional regulator with PAS/PAC sensor%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterPro IPR013767:IPR002078:IPR002197:IPR003593~KEGG: drm:Dred_0663 putative PAS/PAC sensor protein~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase~SPTR: Putative PAS/PAC sensor protein%3B~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1452 Toce_1453 Toce_1453 Toce_1453 1421569 1422693 + L-alanine dehydrogenase COGs: COG0686 Alanine dehydrogenase~InterPro IPR008141:IPR007886:IPR007698:IPR008143~KEGG: chy:CHY_0666 alanine dehydrogenase~PFAM: alanine dehydrogenase/PNT domain protein~SPTR: Alanine dehydrogenase%3B~TIGRFAM: alanine dehydrogenase~PFAM: Alanine dehydrogenase/PNT%2C C-terminal domain%3B Alanine dehydrogenase/PNT%2C N-terminal domain~TIGRFAM: alanine dehydrogenase gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1453 Toce_1454 Toce_1454 Toce_1454 1422710 1424470 - multi-sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterProIPR000014:IPR003660:IPR013767:IPR003661:IPR 003594:IPR005467:IPR000700:IPR004358~KEGG: mta:Moth_0828 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS fold domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS domain containing protein~SPTR: Sensor protein%3B~TIGRFAM: PAS sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1454 Toce_1455 Toce_1455 Toce_1455 1424467 1425150 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: mta:Moth_0827 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1455 Toce_1456 Toce_1456 Toce_1456 1425250 1426014 - polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR002509~KEGG: aoe:Clos_2018 polysaccharide deacetylase~PFAM: polysaccharide deacetylase~SPTR: Polysaccharide deacetylase%3B~PFAM: Polysaccharide deacetylase~TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1456 Toce_1457 Toce_1457 Toce_1457 1426620 1426821 - pseudogene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1457 Toce_1458 Toce_1458 Toce_1458 1426931 1427230 + hypothetical protein KEGG: mfs:MFS40622_1542 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1458 Toce_1459 Toce_1459 Toce_1459 1427233 1427508 + protein of unknown function UPF0016 COGs: COG2119 membrane protein~InterPro IPR001727~KEGG: amt:Amet_4793 hypothetical protein~PFAM: protein of unknown function UPF0016~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein family UPF0016 gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1459 Toce_1460 Toce_1460 Toce_1460 1427571 1429202 + Na/Pi-cotransporter II-related protein COGs: COG1283 Na+/phosphate symporter~InterPro IPR004633:IPR003841:IPR008170~KEGG: cdl:CDR20291_1626 putative sodium/phosphate cotransporter~PFAM: Na+/Picotransporter%3B PhoU family protein~SPTR: Na/Pi cotransporter family protein%3B~TIGRFAM: Na/Pi-cotransporter II-related protein~PFAM: PhoU domain%3B Na+/Pi-cotransporter~TIGRFAM: Na/Pi-cotransporter gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1460 Toce_1461 Toce_1461 Toce_1461 1429520 1430221 + zinc/iron permease COGs: COG0428 divalent heavy-metal cations transporter~InterPro IPR003689~KEGG: putative zinc transporter~PFAM: zinc/iron permease~SPTR: Putative integral membrane protein%3B~PFAM: ZIP Zinc transporter gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1461 Toce_1462 Toce_1462 Toce_1462 1430229 1431920 - cobalamin B12-binding domain protein COGs: COG1032 Fe-S oxidoreductase~InterPro IPR006158:IPR007197:IPR006638~KEGG: tpd:Teth39_0963 radical SAM domain-containing protein~PFAM: cobalamin B12-binding domain protein%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily%3B B12 binding domain gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1462 Toce_1463 Toce_1463 Toce_1463 1431939 1432805 - shikimate 5-dehydrogenase COGs: COG0169 Shikimate 5-dehydrogenase~InterPro IPR011342:IPR013708:IPR006151~KEGG: drm:Dred_1018 shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain protein%3B Shikimate/quinate 5-dehydrogenase~SPTR: Shikimate dehydrogenase%3B~TIGRFAM: shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain%3B Shikimate / quinate 5-dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1463 Toce_1464 Toce_1464 Toce_1464 1432845 1434014 - thiamine biosynthesis/tRNA modification protein ThiI COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase~InterPro IPR003720:IPR004114:IPR020536~KEGG: tte:TTE1662 thiamine biosynthesis protein ThiI~PFAM: Thiamine biosynthesis protein-like%3B THUMP domain protein~SPTR: Probable tRNA sulfurtransferase%3B~TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI~PFAM: Thiamine biosynthesis protein (ThiI)%3B THUMP domain~TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1464 Toce_1465 Toce_1465 Toce_1465 1434018 1435178 - aminotransferase class V COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase~InterPro IPR000192:IPR016454:IPR020578~KEGG: tte:TTE1663 cysteine sulfinate desulfinase/cysteine desulfurase~PFAM: aminotransferase class V~SPTR: Aminotransferase class V%3B~PFAM: Aminotransferase class-V gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1465 Toce_1466 Toce_1466 Toce_1466 1435198 1435521 - putative transcriptional regulator%2C ModE family COGs: COG2005 N-terminal domain of molybdenum-binding protein~InterPro IPR000847~KEGG: mta:Moth_0066 ModE family transcriptional regulator~PFAM: regulatory protein LysR~SPTR: Transcriptional regulator%2C ModE family%3B~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family~TIGRFAM: ModE molybdate transport repressor domain gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1466 Toce_1467 Toce_1467 Toce_1467 1435715 1436166 + pseudogene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1467 Toce_1468 Toce_1468 Toce_1468 1436301 1437776 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1468 Toce_1469 Toce_1469 Toce_1469 1437823 1438842 - domain of unknown function DUF1730 COGs: COG1600 Uncharacterized Fe-S protein~InterPro IPR013542:IPR017896:IPR017900~KEGG: gyc:GYMC61_1368 iron-sulfur cluster binding protein~PFAM: domain of unknown function DUF1730~SPTR: Hypothetical conserved protein%3B~PFAM: 4Fe-4S binding domain%3B Domain of unknown function (DUF1730)~TIGRFAM: iron-sulfur cluster binding protein%2C putative gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1469 Toce_1470 Toce_1470 Toce_1470 1439072 1439365 + pseudogene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1470 Toce_1471 Toce_1471 Toce_1471 1439721 1441007 - hydrogenase large subunit domain protein COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain~InterPro IPR004108:IPR017896:IPR017900~KEGG: dae:Dtox_1708 hydrogenase large subunit domain protein~PFAM: hydrogenase large subunit domain protein~SPTR: Hydrogenase large subunit domain protein%3B~PFAM: Iron only hydrogenase large subunit%2C C-terminal domain%3B 4Fe-4S binding domain gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1471 Toce_1472 Toce_1472 Toce_1472 1441200 1441829 - Formimidoyltetrahydrofolate cyclodeaminase COGs: COG3404 Methenyl tetrahydrofolate cyclohydrolase~InterPro IPR007044~KEGG: dtu:Dtur_0698 formiminotransferase-cyclodeaminase~PFAM: Formiminotransferase-cyclodeaminase~SPTR: Formiminotransferase-cyclodeaminase%3B~PFAM: Formiminotransferase-cyclodeaminase gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1472 Toce_1473 Toce_1473 Toce_1473 1441884 1443137 - imidazolonepropionase COGs: COG1228 Imidazolonepropionase and related amidohydrolase~InterPro IPR005920:IPR006680~KEGG: hutI%3B imidazolonepropionase~PFAM: amidohydrolase~SPTR: Imidazolonepropionase%3B~TIGRFAM: imidazolonepropionase~PFAM: Amidohydrolase family~TIGRFAM: imidazolonepropionase gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1473 Toce_1474 Toce_1474 Toce_1474 1443158 1444060 - glutamate formiminotransferase COGs: COG3643 Glutamate formiminotransferase~InterPro IPR004227:IPR012886:IPR013802~KEGG: sds:SDEG_2057 glutamate formiminotransferase~PFAM: Formiminotransferase domain protein%3B Formiminotransferase domain protein~PRIAM: Glutamate formimidoyltransferase~SPTR: Glutamate formiminotransferase%3B~TIGRFAM: glutamate formiminotransferase~PFAM: Formiminotransferase domain%2C N-terminal subdomain%3B Formiminotransferase domain~TIGRFAM: glutamate formiminotransferase gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1474 Toce_1475 Toce_1475 Toce_1475 1444077 1445726 - urocanate hydratase COGs: COG2987 Urocanate hydratase~InterPro IPR000193~KEGG: tpd:Teth39_1837 urocanate hydratase~PFAM: Urocanase~PRIAM: Urocanate hydratase~SPTR: Urocanate hydratase%3B~TIGRFAM: urocanate hydratase~PFAM: Urocanase~TIGRFAM: urocanate hydratase gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1475 Toce_1476 Toce_1476 Toce_1476 1445871 1447406 - histidine ammonia-lyase COGs: COG2986 Histidine ammonia-lyase~InterPro IPR005921:IPR001106~KEGG: tpd:Teth39_1488 histidine ammonia-lyase~PFAM: phenylalanine/histidine ammonia-lyase~PRIAM: Histidine ammonia-lyase~SPTR: Histidine ammonia-lyase%3B~TIGRFAM: histidine ammonia-lyase~PFAM: Phenylalanine and histidine ammonia-lyase~TIGRFAM: phenylalanine ammonia-lyase%3B histidine ammonia-lyase gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1476 Toce_1477 Toce_1477 Toce_1477 1447570 1448973 - Na+/solute symporter COGs: COG0591 Na+/proline symporter~InterPro IPR001734~KEGG: hor:Hore_00590 sodium:solute symporter~PFAM: Na+/solute symporter~SPTR: Sodium:solute symporter family protein%3B~PFAM: Sodium:solute symporter family~TIGRFAM: SSS sodium solute transporter superfamily gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1477 Toce_1478 Toce_1478 Toce_1478 1449240 1449476 + Peptidoglycan-binding domain 1 protein InterPro IPR002477~KEGG: tte:TTE1528 peptidoglycan-binding domain-containing protein~PFAM: Peptidoglycan-binding domain 1 protein~SPTR: Putative peptidoglycan-binding domain-containing protein%3B~PFAM: Putative peptidoglycan binding domain gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1478 Toce_1479 Toce_1479 Toce_1479 1449504 1449719 - small%2C acid-soluble spore protein I InterPro IPR017525~KEGG: tpd:Teth39_0969 small acid-soluble spore protein SspI~SPTR: Small%2C acid-soluble spore protein I%3B~TIGRFAM: small%2C acid-soluble spore protein I~TIGRFAM: small%2C acid-soluble spore protein I gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1479 Toce_1480 Toce_1480 Toce_1480 1449811 1450140 - export-related chaperone CsaA COGs: COG0073 EMAP domain~InterPro IPR008231:IPR002547~KEGG: bmq:BMQ_pBM50063 export-related chaperone CsaA~PFAM: t-RNA-binding domain protein~SPTR: Export-related chaperone CsaA%3B~TIGRFAM: export-related chaperone CsaA~PFAM: Putative tRNA binding domain~TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain%3B export-related chaperone CsaA gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1480 Toce_1481 Toce_1481 Toce_1481 1450173 1451072 - transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119~KEGG: dhd:Dhaf_1115 transcriptional regulator%2C LysR family~PFAM: LysR substrate-binding%3B regulatory protein LysR~SPTR: Transcriptional regulator%2C LysR family%3B~PFAM: Bacterial regulatory helix-turn-helix protein%2C lysR family%3B LysR substrate binding domain gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1481 Toce_1482 Toce_1482 Toce_1482 1451155 1451844 - sugar fermentation stimulation protein COGs: COG1489 DNA-binding protein stimulates sugar fermentation~InterPro IPR005224~KEGG: cbi:CLJ_B0041 sugar fermentation stimulation protein~PFAM: sugar fermentation stimulation protein~SPTR: Sugar fermentation stimulation protein%3B~TIGRFAM: sugar fermentation stimulation protein~PFAM: Sugar fermentation stimulation protein~TIGRFAM: sugar fermentation stimulation protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1482 Toce_1483 Toce_1483 Toce_1483 1451857 1452663 - conserved hypothetical protein KEGG: hor:Hore_09920 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1483 Toce_1484 Toce_1484 Toce_1484 1452753 1454123 - methylaspartate mutase InterPro IPR006230~KEGG: amt:Amet_2372 methylaspartate mutase~SPTR: Methylaspartate mutase%3B~TIGRFAM: conserved hypothetical protein gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1484 Toce_1485 Toce_1485 Toce_1485 1454141 1456336 - D-ornithine 4%2C5-aminomutase E subunit COGs: COG5012 cobalamin binding protein~InterPro IPR015130:IPR006158~KEGG: tte:TTE1238 methylmalonyl-CoA mutase C-terminal domain-containing protein~PFAM: cobalamin B12-binding domain protein%3B D-Lysine 56-aminomutase alpha subunit~SPTR: Methylmalonyl-CoA mutase%2C C-terminal domain/subunit (Cobalamin-binding)%3B~PFAM: D-Lysine 5%2C6-aminomutase alpha subunit%3B B12 binding domain~TIGRFAM: methylmalonyl-CoA mutase C-terminal domain gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1485 Toce_1486 Toce_1486 Toce_1486 1456336 1456725 - D-ornithine 4%2C5-aminomutase S subunit KEGG: hor:Hore_21080 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1486 Toce_1487 Toce_1487 Toce_1487 1456738 1458156 - Pyridoxal-5'-phosphate-dependent protein beta subunit COGs: COG0031 Cysteine synthase~InterPro IPR001926~KEGG: tte:TTE1236 threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~SPTR: Threonine synthase%3B~PFAM: Pyridoxal-phosphate dependent enzyme gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1487 Toce_1488 Toce_1488 Toce_1488 1458153 1458458 - conserved hypothetical protein KEGG: taf:THA_1161 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1488 Toce_1489 Toce_1489 Toce_1489 1458451 1459503 - dihydrodipicolinate reductase COGs: COG3804 conserved hypothetical protein related to dihydrodipicolinate reductase~InterPro IPR000846~KEGG: tte:TTE1234 hypothetical protein~PFAM: dihydrodipicolinate reductase~SPTR: Putative uncharacterized protein%3B~PFAM: Dihydrodipicolinate reductase%2C N-terminus gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1489 Toce_1490 Toce_1490 Toce_1490 1459677 1461062 - Na+/H+ antiporter NhaC COGs: COG1757 Na+/H+ antiporter~InterPro IPR004770:IPR018461~KEGG: aoe:Clos_2497 Na+/H+ antiporter NhaC~PFAM: Na+/H+ antiporter NhaC-like~SPTR: Na+/H+ antiporter NhaC%3B~TIGRFAM: Na+/H+ antiporter NhaC~PFAM: Na+/H+ antiporter family~TIGRFAM: Na+/H+ antiporter NhaC gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1490 Toce_1491 Toce_1491 Toce_1491 1461177 1462244 - alanine racemase domain protein COGs: COG3457 amino acid racemase~InterPro IPR001608~KEGG: hor:Hore_19150 alanine racemase domain protein~PFAM: alanine racemase domain protein~SPTR: Amino acid racemase%3B~PFAM: Alanine racemase%2C N-terminal domain gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1491 Toce_1492 Toce_1492 Toce_1492 1462280 1463698 - PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR013656:IPR002078:IPR002197:IPR 003593:IPR020441~KEGG: amt:Amet_2366 sigma-54 dependent trancsriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold-4 domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma54 specific transcriptional regulator%2C Fis family%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1492 Toce_1493 Toce_1493 Toce_1493 1463720 1464097 - protein of unknown function DUF1284 COGs: COG3543 conserved hypothetical protein~InterPro IPR009702~KEGG: adg:Adeg_0990 protein of unknown function DUF1284~PFAM: protein of unknown function DUF1284~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1284) gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1493 Toce_1494 Toce_1494 Toce_1494 1464094 1464627 - conserved hypothetical protein KEGG: amt:Amet_4522 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1494 Toce_1495 Toce_1495 Toce_1495 1464747 1466096 + polynucleotide adenylyltransferase/metal dependent phosphohydrolase COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase~InterPro IPR002646:IPR006674~KEGG: bhy:BHWA1_01411 polyA polymerase~PFAM: Polynucleotide adenylyltransferase region%3B metal-dependent phosphohydrolase HD sub domain~SPTR: Uncharacterized domain HDIG-containing protein%3B~PFAM: HD domain%3B Poly A polymerase head domain gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1495 Toce_1496 Toce_1496 Toce_1496 1466074 1466622 + phosphodiesterase%2C MJ0936 family COGs: COG0622 phosphoesterase~InterPro IPR000979:IPR004843~KEGG: drm:Dred_0738 phosphodiesterase~PFAM: metallophosphoesterase~SPTR: Phosphodiesterase%2C MJ0936 family%3B~TIGRFAM: phosphodiesterase%2C MJ0936 family~PFAM: Calcineurin-like phosphoesterase~TIGRFAM: phosphoesterase%2C MJ0936 family gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1496 Toce_1497 Toce_1497 Toce_1497 1466759 1468012 - phosphoribosylamine--glycine ligase COGs: COG0151 Phosphoribosylamine-glycine ligase~InterProIPR000115:IPR020562:IPR020561:IPR020560:IPR 011761:IPR020559~KEGG: pth:PTH_2540 phosphoribosylamine-glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C N-domain%3B Phosphoribosylglycinamide synthetase%2C C-domain~PRIAM: Phosphoribosylamine--glycine ligase~SPTR: Phosphoribosylamine-glycine ligase%3B~TIGRFAM: phosphoribosylamine/glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C N domain%3B Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C C domain~TIGRFAM: phosphoribosylamine--glycine ligase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1497 Toce_1498 Toce_1498 Toce_1498 1468031 1469587 - IMP cyclohydrolase %3Bphosphoribosylaminoimidazolecarboxamide formyltransferase COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)~InterPro IPR002695:IPR011607:IPR013982~KEGG: tte:TTE0592 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme formylation region%3B MGS domain protein~PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase~SMART: AICARFT/IMPCHase bienzyme formylation region~SPTR: Bifunctional purine biosynthesis protein PurH%3B~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme%3B MGS-like domain~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1498 Toce_1499 Toce_1499 Toce_1499 1469587 1470222 - formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN~InterPro IPR004607:IPR002376~KEGG: tle:Tlet_1910 phosphoribosylglycinamide formyltransferase~PFAM: formyl transferase domain protein~SPTR: Phosphoribosylglycinamide formyltransferase%3B~TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: Formyl transferase~TIGRFAM: phosphoribosylglycinamide formyltransferase%2C formyltetrahydrofolate-dependent gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1499 Toce_1500 Toce_1500 Toce_1500 1470210 1471247 - phosphoribosylformylglycinamidine cyclo-ligase COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase~InterPro IPR004733:IPR000728:IPR010918~KEGG: tle:Tlet_1911 phosphoribosylformylglycinamidine cyclo-ligase~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase~SPTR: Phosphoribosylformylglycinamidine cyclo-ligase%3B~TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylaminoimidazole synthetase gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1500 Toce_1501 Toce_1501 Toce_1501 1471260 1472666 - amidophosphoribosyltransferase COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase~InterPro IPR005854:IPR000583:IPR000836:IPR017932~KEGG: tle:Tlet_1912 amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase~SPTR: Amidophosphoribosyltransferase%3B~TIGRFAM: amidophosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain%3B Glutamine amidotransferases class-II~TIGRFAM: amidophosphoribosyltransferase gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1501 Toce_1502 Toce_1502 Toce_1502 1472663 1474876 - phosphoribosylformylglycinamidine synthase subunit II COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain~InterPro IPR010074:IPR000728:IPR010918~KEGG: tit:Thit_0572 phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: Phosphoribosylformylglycinamidine synthase II%3B~TIGRFAM: phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: phosphoribosylformylglycinamidine synthase II gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1502 Toce_1503 Toce_1503 Toce_1503 1474860 1475579 - phosphoribosylformylglycinamidine synthase subunit I COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain~InterPro IPR010075:IPR011698:IPR017926~KEGG: chy:CHY_1073 phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ domain protein glutamine amidotransferase~PRIAM: Phosphoribosylformylglycinamidine synthase~SPTR: Phosphoribosylformylglycinamidine synthase 1%3B~TIGRFAM: phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ-like glutamine amidotransferase domain~TIGRFAM: phosphoribosylformylglycinamidine synthase I gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1503 Toce_1504 Toce_1504 Toce_1504 1475576 1475830 - phosphoribosylformylglycinamidine synthase%2C purS COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component~InterPro IPR003850~KEGG: purS%3B phosphoribosylformylglycinamidine synthase%2C PurS component~PFAM: phosphoribosylformylglycinamidine synthetase PurS~SPTR: Phosphoribosylformylglycinamidine synthase%2C purS%3B~TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS~PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase~TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1504 Toce_1505 Toce_1505 Toce_1505 1475912 1476616 - phosphoribosylaminoimidazole-succinocarboxamide synthase COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase~InterPro IPR001636:IPR018236~KEGG: tle:Tlet_1916 phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase~PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase~SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase%3B~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase~TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1505 Toce_1506 Toce_1506 Toce_1506 1476613 1477116 - 5-(carboxyamino)imidazole ribonucleotide mutase COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase~InterPro IPR000031~KEGG: pab:PAB1077 phosphoribosylaminoimidazole carboxylase catalytic subunit~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~PRIAM: Phosphoribosylaminoimidazole carboxylase~SPTR: Phosphoribosylaminoimidazole carboxylase catalytic subunit%3B~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: AIR carboxylase~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C PurE protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1506 Toce_1507 Toce_1507 Toce_1507 1477524 1481448 + pseudogene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1507 Toce_1508 Toce_1508 Toce_1508 1477985 1479508 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1508 Toce_1509 Toce_1509 Toce_1509 1479560 1480234 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1509 Toce_1510 Toce_1510 Toce_1510 1481481 1482656 - aromatic amino acid aminotransferase apoenzyme COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase~InterPro IPR004839:IPR004838~KEGG: tex:Teth514_0236 aminotransferase%2C class I and II~PFAM: aminotransferase class I and II~SPTR: Aminotransferase%2C class I and II%3B~PFAM: Aminotransferase class I and II gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1510 Toce_1511 Toce_1511 Toce_1511 1482715 1483404 - endonuclease III %3BDNA-(apurinic or apyrimidinic site) lyase COGs: COG0177 EndoIII-related endonuclease~InterProIPR005759:IPR003265:IPR003651:IPR003583:IPR 004035:IPR004036~KEGG: tte:TTE1769 EndoIII-related endonuclease~PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop~PRIAM: DNA-(apurinic or apyrimidinic site) lyase~SMART: HhH-GPD family protein%3B Helix-hairpin-helix DNA-binding class 1%3B iron-sulfur cluster loop~SPTR: Predicted EndoIII-related endonuclease%3B~TIGRFAM: endonuclease III~PFAM: HhH-GPD superfamily base excision DNA repair protein%3B Iron-sulfur binding domain of endonuclease III%3B Helix-hairpin-helix motif~TIGRFAM: endonuclease III gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1511 Toce_1512 Toce_1512 Toce_1512 1483419 1484255 - Endonuclease IV COGs: COG0648 Endonuclease IV~InterPro IPR001719:IPR012307:IPR018246~KEGG: hmo:HM1_0112 ap endonuclease%2C family 2~PFAM: Xylose isomerase domain protein TIM barrel~PRIAM: Deoxyribonuclease IV (phage-T(4)-induced)~SMART: AP endonuclease family 2~SPTR: Probable endonuclease 4%3B~TIGRFAM: apurinic endonuclease Apn1~PFAM: Xylose isomerase-like TIM barrel~TIGRFAM: apurinic endonuclease (APN1) gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1512 Toce_1513 Toce_1513 Toce_1513 1484273 1485268 - Membrane dipeptidase COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog~InterPro IPR008257~KEGG: dae:Dtox_3097 membrane dipeptidase~PFAM: peptidase M19 renal dipeptidase~PRIAM: Membrane dipeptidase~SPTR: Membrane dipeptidase%3B~PFAM: Membrane dipeptidase (Peptidase family M19) gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1513 Toce_1514 Toce_1514 Toce_1514 1485336 1486196 - PHP domain protein COGs: COG0613 metal-dependent phosphoesterase (PHP family)~InterPro IPR004013:IPR003141~KEGG: cpe:CPE2147 hypothetical protein~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: PHP domain gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1514 Toce_1515 Toce_1515 Toce_1515 1486462 1487016 + nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: tex:Teth514_0144 nitroreductase~PFAM: nitroreductase~SPTR: Nitroreductase%3B~PFAM: Nitroreductase family gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1515 Toce_1516 Toce_1516 Toce_1516 1487104 1487973 + conserved hypothetical protein KEGG: aoe:Clos_2610 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1516 Toce_1517 Toce_1517 Toce_1517 1488065 1488849 - pseudogene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1517 Toce_1518 Toce_1518 Toce_1518 1488853 1489726 - pseudogene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1518 Toce_1519 Toce_1519 Toce_1519 1489704 1490339 - regulatory protein TetR InterPro IPR001647~KEGG: ssa:SSA_1768 TetR/AcrR family transcriptional regulator~PFAM: regulatory protein TetR~SPTR: Transcriptional regulator%2C TetR/AcrR family%2C putative%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1519 Toce_1520 Toce_1520 Toce_1520 1490535 1491515 + Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: dsy:DSY2212 hypothetical protein~PFAM: Polyprenyl synthetase~SPTR: Putative uncharacterized protein%3B~PFAM: Polyprenyl synthetase gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1520 Toce_1521 Toce_1521 Toce_1521 1491516 1492574 - Protein of unknown function DUF2600 InterPro IPR019712~KEGG: dhd:Dhaf_3343 hypothetical protein~PFAM: Protein of unknown function DUF2600~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2600) gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1521 Toce_1522 Toce_1522 Toce_1522 1492732 1494918 + conserved hypothetical protein KEGG: tte:TTE0101 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1522 Toce_1523 Toce_1523 Toce_1523 1494920 1496035 + glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: tit:Thit_0888 glycosyl transferase group 1~PFAM: glycosyl transferase group 1~SPTR: Glycosyl transferase group 1%3B~PFAM: Glycosyl transferases group 1 gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1523 Toce_1524 Toce_1524 Toce_1524 1496233 1496502 + pseudogene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1524 Toce_1525 Toce_1525 Toce_1525 1496497 1498125 - Inorganic diphosphatase COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase~InterPro IPR000644:IPR010766:IPR004097~KEGG: tte:TTE2447 putative manganese-dependent inorganic pyrophosphatase~PFAM: DHHA2 domain protein%3B DRTGG domain protein%3B CBS domain containing protein~PRIAM: Inorganic diphosphatase~SPTR: DRTGG domain protein%3B~PFAM: DHH family%3B DRTGG domain%3B DHHA2 domain%3B CBS domain gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1525 Toce_1526 Toce_1526 Toce_1526 1498196 1498342 - hypothetical protein KEGG: smc:SmuNN2025_1005 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Oxaloacetate decarboxylase%2C gamma chain gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1526 Toce_1527 Toce_1527 Toce_1527 1498361 1499464 - sodium ion-translocating decarboxylase%2C beta subunit COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit~InterPro IPR005661~KEGG: tte:TTE0252 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase%2C beta subunit~PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit~PRIAM: Glutaconyl-CoA decarboxylase~SPTR: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase%2C beta subunit%3B~TIGRFAM: sodium ion-translocating decarboxylase%2C beta subunit~PFAM: subunit~TIGRFAM: sodium ion-translocating decarboxylase%2C beta subunit gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1527 Toce_1528 Toce_1528 Toce_1528 1499665 1501086 - carboxyl-terminal protease COGs: COG0793 Periplasmic protease~InterPro IPR004447:IPR001478:IPR005151:IPR002477~KEGG: tte:TTE2617 periplasmic protease~PFAM: peptidase S41%3B PDZ/DHR/GLGF domain protein%3B Peptidoglycan-binding domain 1 protein~PRIAM: C-terminal processing peptidase~SMART: peptidase S41%3B PDZ/DHR/GLGF domain protein~SPTR: Carboxyl-terminal protease%3B~TIGRFAM: carboxyl-terminal protease~PFAM: Putative peptidoglycan binding domain%3B Peptidase family S41%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: C-terminal peptidase (prc) gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1528 Toce_1529 Toce_1529 Toce_1529 1501115 1502779 - 2-polyprenylphenol 6-hydroxylase COGs: COG0661 unusual protein kinase~InterPro IPR010232:IPR004147:IPR002575~KEGG: gur:Gura_1388 hypothetical protein~PFAM: ABC-1 domain protein%3B aminoglycoside phosphotransferase~SPTR: 2-octaprenylphenol hydroxylase%3B~TIGRFAM: 2-polyprenylphenol 6-hydroxylase~PFAM: Phosphotransferase enzyme family%3B ABC1 family~TIGRFAM: 2-polyprenylphenol 6-hydroxylase gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1529 Toce_1530 Toce_1530 Toce_1530 1503025 1503960 - C4-dicarboxylate transporter/malic acid transport protein COGs: COG1275 Tellurite resistance protein and related permease~InterPro IPR004695~KEGG: amt:Amet_3721 C4-dicarboxylate transporter/malic acid transport protein~PFAM: C4-dicarboxylate transporter/malic acid transport protein~SPTR: C4-dicarboxylate transporter/malic acid transport protein%3B~PFAM: C4-dicarboxylate transporter/malic acid transport protein gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1530 Toce_1531 Toce_1531 Toce_1531 1503975 1504451 - C_GCAxxG_C_C family protein InterPro IPR010181:IPR000834~KEGG: amt:Amet_3720 C_GCAxxG_C_C family protein~PFAM: C_GCAxxG_C_C family protein~SPTR: C_GCAxxG_C_C family protein%3B~TIGRFAM: C_GCAxxG_C_C family protein~PFAM: Putative redox-active protein (C_GCAxxG_C_C)~TIGRFAM: C_GCAxxG_C_C family probable redox protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1531 Toce_1532 Toce_1532 Toce_1532 1504609 1504929 - hypothetical protein KEGG: sfu:Sfum_2544 FmdB family regulatory protein~SPTR: Putative transporter%3B~PFAM: Zinc ribbon domain gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1532 Toce_1533 Toce_1533 Toce_1533 1504932 1506782 - methyltransferase MtaA/CmuA family COGs: COG5012 cobalamin binding protein~InterPro IPR006360:IPR000257:IPR003759:IPR006158~KEGG: mch:Mchl_5697 methyltransferase MtaA/CmuA family~PFAM: cobalamin B12-binding domain protein%3B Methionine synthase B12-binding module cap domain protein%3B Uroporphyrinogen decarboxylase (URO-D)~SPTR: Methyltransferase/corrinoid CmuA%3B~TIGRFAM: methyltransferase MtaA/CmuA family~PFAM: Uroporphyrinogen decarboxylase (URO-D)%3B B12 binding domain~TIGRFAM: methylmalonyl-CoA mutase C-terminal domain%3B methyltransferase%2C MtaA/CmuA family gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1533 Toce_1534 Toce_1534 Toce_1534 1506883 1508049 - conserved hypothetical protein KEGG: mch:Mchl_5728 hypothetical protein~SPTR: Methyltransferase CmuC%3B~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1534 Toce_1535 Toce_1535 Toce_1535 1508064 1508960 - Tetrahydromethanopterin S-methyltransferase COGs: COG1962 Tetrahydromethanopterin S-methyltransferase subunit H~InterPro IPR002856~KEGG: mch:Mchl_5727 tetrahydromethanopterin S-methyltransferase subunit H~PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit~PRIAM: Tetrahydromethanopterin S-methyltransferase~SPTR: CmuB%3B~PFAM: Tetrahydromethanopterin S-methyltransferase MtrH subunit~TIGRFAM: N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1535 Toce_1536 Toce_1536 Toce_1536 1508963 1509469 - HPP family protein COGs: COG3448 CBS-domain-containing membrane protein~InterPro IPR007065~KEGG: drm:Dred_2943 HPP family protein+B94~PFAM: HPP family protein~SPTR: HPP family protein+B94%3B~PFAM: HPP family gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1536 Toce_1537 Toce_1537 Toce_1537 1509741 1510493 + DNA binding domain protein%2C excisionase family InterPro IPR010093:IPR000551~KEGG: ttr:Tter_2677 DNA binding domain protein%2C excisionase family~PFAM: regulatory protein MerR~SPTR: DNA binding domain protein%2C excisionase family%3B~TIGRFAM: DNA binding domain protein%2C excisionase family~TIGRFAM: DNA binding domain%2C excisionase family gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1537 Toce_1538 Toce_1538 Toce_1538 1510591 1512066 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1538 Toce_1539 Toce_1539 Toce_1539 1512217 1514067 - protein of unknown function DUF342 COGs: COG1315 polymerase most protein contain PALM domain HD hydrolase domain and Zn-ribbon domain~InterPro IPR005646~KEGG: mta:Moth_0394 hypothetical protein~PFAM: protein of unknown function DUF342~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF342)~TIGRFAM: septum site-determining protein MinC gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1539 Toce_1540 Toce_1540 Toce_1540 1514087 1514398 - anti-anti-sigma factor InterPro IPR003658:IPR002645~KEGG: mta:Moth_0393 anti-sigma-factor antagonist domain-containing protein~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~SPTR: Anti-sigma-factor antagonist (STAS) domain protein%3B~TIGRFAM: anti-anti-sigma factor~PFAM: STAS domain~TIGRFAM: anti-anti-sigma factor gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1540 Toce_1541 Toce_1541 Toce_1541 1514388 1515113 - protein serine/threonine phosphatase COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit~InterPro IPR010822:IPR001932~KEGG: mta:Moth_0392 serine phosphatase~PFAM: Stage II sporulation E family protein~SMART: protein phosphatase 2C domain protein~SPTR: Serine phosphatase%3B~PFAM: Stage II sporulation protein E (SpoIIE) gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1541 Toce_1542 Toce_1542 Toce_1542 1515115 1515441 - anti-sigma-factor antagonist COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)~InterPro IPR003658:IPR002645~KEGG: mta:Moth_0391 anti-sigma-factor antagonist domain-containing protein~PFAM: Sulfate transporter/antisigma-factor antagonist STAS~SPTR: Anti-sigma factor antagonist%3B~TIGRFAM: anti-anti-sigma factor~PFAM: STAS domain~TIGRFAM: anti-anti-sigma factor gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1542 Toce_1543 Toce_1543 Toce_1543 1515475 1516716 - ATP-binding region ATPase domain protein InterPro IPR003594~KEGG: mta:Moth_0388 putative anti-sigma regulatory factor (serine/threonine protein kinase)~PFAM: ATP-binding region ATPase domain protein~SPTR: Putative anti-sigma regulatory factor (Serine/threonine protein kinase)%3B~PFAM: Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1543 Toce_1544 Toce_1544 Toce_1544 1516922 1517908 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674:IPR003607~KEGG: det:DET0624 response regulator~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Response regulator%3B~PFAM: HD domain gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1544 Toce_1545 Toce_1545 Toce_1545 1518390 1519373 + two component transcriptional regulator%2C LuxR family COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain~InterPro IPR001789:IPR000792~KEGG: cac:CAC0174 response regulator~PFAM: regulatory protein LuxR%3B response regulator receiver~SMART: regulatory protein LuxR~SPTR: Two component transcriptional regulator%2C LuxR family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory proteins%2C luxR family gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1545 Toce_1546 Toce_1546 Toce_1546 1519425 1520900 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1546 Toce_1547 Toce_1547 Toce_1547 1521032 1522661 - pseudogene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1547 Toce_1548 Toce_1548 Toce_1548 1522993 1524144 - iron-containing alcohol dehydrogenase COGs: COG1454 Alcohol dehydrogenase class IV~InterPro IPR001670~KEGG: tex:Teth514_0145 iron-containing alcohol dehydrogenase~PFAM: iron-containing alcohol dehydrogenase~SPTR: Iron-containing alcohol dehydrogenase%3B~PFAM: Iron-containing alcohol dehydrogenase gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1548 Toce_1549 Toce_1549 Toce_1549 1524164 1526128 - NADH:flavin oxidoreductase/NADH oxidase COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family~InterPro IPR001155:IPR013027:IPR000103~KEGG: tex:Teth514_0146 NADH:flavin oxidoreductase/NADH oxidase~PFAM: NADH:flavin oxidoreductase/NADH oxidase%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~SPTR: NADH:flavin oxidoreductase/NADH oxidase%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B NADH:flavin oxidoreductase / NADH oxidase family gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1549 Toce_1550 Toce_1550 Toce_1550 1526346 1527242 + transcriptional regulator%2C LysR family COGs: COG0583 Transcriptional regulator~InterPro IPR000847:IPR005119~KEGG: tex:Teth514_0147 LysR family transcriptional regulator~PFAM: regulatory protein LysR%3B LysR substrate-binding~SPTR: Transcriptional regulator%2C LysR family%3B~PFAM: LysR substrate binding domain%3B Bacterial regulatory helix-turn-helix protein%2C lysR family gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1550 Toce_1551 Toce_1551 Toce_1551 1527277 1528221 - UbiA prenyltransferase COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase~InterPro IPR000537~KEGG: cth:Cthe_3041 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~PFAM: UbiA prenyltransferase~SPTR: UbiA prenyltransferase%3B~PFAM: UbiA prenyltransferase family gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1551 Toce_1552 Toce_1552 Toce_1552 1528668 1530359 + Bilirubin oxidase COGs: COG2132 Putative multicopper oxidase~InterPro IPR011707:IPR011706~KEGG: bcl:ABC2649 spore coat protein~PFAM: multicopper oxidase type 2%3B multicopper oxidase type 3~PRIAM: Bilirubin oxidase~SPTR: Spore coat protein%3B~PFAM: Multicopper oxidase gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1552 Toce_1553 Toce_1553 Toce_1553 1530476 1531828 - 23S rRNA m(5)U-1939 methyltransferase COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase~InterPro IPR001566:IPR002792:IPR010280~KEGG: tpd:Teth39_0686 RNA methyltransferase~PFAM: (Uracil-5)-methyltransferase%3B deoxyribonuclease/rho motif-related TRAM~SPTR: RNA methyltransferase%2C TrmA family%3B~TIGRFAM: RNA methyltransferase%2C TrmA family~PFAM: TRAM domain%3B tRNA (Uracil-5-)-methyltransferase~TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1553 Toce_1554 Toce_1554 Toce_1554 1531855 1532337 - RNA methyltransferase%2C TrmH family%2C group 2 COGs: COG0219 rRNA methylase (SpoU class)~InterPro IPR004440:IPR001537:IPR016914~KEGG: cce:Ccel_2278 tRNA/rRNA methyltransferase (SpoU)~PFAM: tRNA/rRNA methyltransferase (SpoU)~SPTR: tRNA/rRNA methyltransferase (SpoU)%3B~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 2~PFAM: SpoU rRNA Methylase family~TIGRFAM: rRNA methylase%2C putative%2C group 2 gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1554 Toce_1555 Toce_1555 Toce_1555 1532353 1533174 - histidinol phosphate phosphatase HisJ family COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family~InterPro IPR010140:IPR004013~KEGG: tit:Thit_2263 histidinol phosphate phosphatase HisJ family~PFAM: PHP domain protein~SPTR: Histidinol phosphate phosphatase HisJ family%3B~TIGRFAM: histidinol phosphate phosphatase HisJ family~TIGRFAM: histidinol phosphate phosphatase HisJ family gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1555 Toce_1556 Toce_1556 Toce_1556 1533327 1533796 - pseudogene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1556 Toce_1557 Toce_1557 Toce_1557 1533801 1534048 + pseudogene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1557 Toce_1558 Toce_1558 Toce_1558 1534279 1535574 - putative methionine transporter%2C NhaC family (TC 2.A.35.1.-) COGs: COG1757 Na+/H+ antiporter~InterPro IPR018461~KEGG: nth:Nther_2679 Na+/H+ antiporter NhaC~PFAM: Na+/H+ antiporter NhaC-like~SPTR: Na+/H+ antiporter NhaC%3B~PFAM: Na+/H+ antiporter family gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1558 Toce_1559 Toce_1559 Toce_1559 1535599 1536804 - methionine gamma-lyase COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase~InterPro IPR006237:IPR000277~KEGG: cko:CKO_04984 hypothetical protein~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~SPTR: Methionine gamma-lyase%3B~TIGRFAM: methionine gamma-lyase~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: methionine gamma-lyase%3B O-succinylhomoserine sulfhydrylase gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1559 Toce_1560 Toce_1560 Toce_1560 1536961 1538547 - PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR002912:IPR013767:IPR002078:IPR 002197:IPR003593~KEGG: drm:Dred_0663 putative PAS/PAC sensor protein~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold domain protein%3B amino acid-binding ACT domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Putative PAS/PAC sensor protein%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1560 Toce_1561 Toce_1561 Toce_1561 1538641 1538742 - conserved hypothetical protein KEGG: tit:Thit_2326 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1561 Toce_1562 Toce_1562 Toce_1562 1538758 1540335 - sodium:neurotransmitter symporter COGs: COG0733 Na+-dependent transporter of the SNF family~InterPro IPR000175~KEGG: tit:Thit_2327 sodium:neurotransmitter symporter~PFAM: sodium:neurotransmitter symporter~SPTR: Sodium:neurotransmitter symporter%3B~PFAM: Sodium:neurotransmitter symporter family gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1562 Toce_1563 Toce_1563 Toce_1563 1540489 1541067 - Indolepyruvate ferredoxin oxidoreductase COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR019752~KEGG: tte:TTE2193 indolepyruvate oxidoreductase subunit beta~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~PRIAM: Indolepyruvate ferredoxin oxidoreductase~SPTR: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C gamma subunit%3B~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C beta subunit gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1563 Toce_1564 Toce_1564 Toce_1564 1541067 1542821 - indolepyruvate ferredoxin oxidoreductase%2C alpha subunit COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits~InterProIPR017721:IPR002880:IPR011766:IPR017896:IPR 017900~KEGG: tte:TTE2194 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase%2C alpha subunit~PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~SPTR: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C alpha subunit%3B~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C alpha subunit~PFAM: domain%3B Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain~TIGRFAM: indolepyruvate ferredoxin oxidoreductase%2C alpha subunit gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1564 Toce_1565 Toce_1565 Toce_1565 1542818 1543726 - phosphate butyryltransferase COGs: COG0280 Phosphotransacetylase~InterPro IPR002505:IPR012147~KEGG: tte:TTE2204 phosphate butyryltransferase~PFAM: phosphate acetyl/butaryl transferase~PRIAM: Phosphate butyryltransferase~SPTR: Phosphotransacetylase%3B~PFAM: Phosphate acetyl/butaryl transferase~TIGRFAM: phosphate butyryltransferase gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1565 Toce_1566 Toce_1566 Toce_1566 1543729 1544808 - butyrate kinase COGs: COG3426 Butyrate kinase~InterPro IPR011245:IPR000890~KEGG: tpd:Teth39_0462 butyrate kinase~PFAM: acetate and butyrate kinase~SPTR: Acetate and butyrate kinase%3B~TIGRFAM: butyrate kinase~PFAM: Acetokinase family~TIGRFAM: butyrate kinase gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1566 Toce_1567 Toce_1567 Toce_1567 1544817 1545908 - leucine dehydrogenase COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase~InterPro IPR006097:IPR006096:IPR006095:IPR016211~KEGG: nth:Nther_2349 leucine dehydrogenase~PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region%3B Glu/Leu/Phe/Val dehydrogenase~SPTR: Leucine dehydrogenase%3B~PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase%3B Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1567 Toce_1568 Toce_1568 Toce_1568 1546124 1547512 - PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR013767:IPR002078:IPR002197:IPR 003593~KEGG: hor:Hore_06720 sigma54 specific transcriptional regulator%2C fis family~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma54 specific transcriptional regulator%2C Fis family%3B~TIGRFAM: PAS sensor protein~PFAM: Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1568 Toce_1569 Toce_1569 Toce_1569 1547590 1548285 + conserved hypothetical protein KEGG: tit:Thit_2328 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1569 Toce_1570 Toce_1570 Toce_1570 1548348 1549070 - amino acid ABC transporter ATP-binding protein%2C PAAT family COGs: COG1126 ABC-type polar amino acid transport system ATPase component~InterPro IPR003439:IPR003593:IPR017871~KEGG: mta:Moth_1128 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1570 Toce_1571 Toce_1571 Toce_1571 1549063 1549725 - amino acid ABC transporter membrane protein%2C PAAT family COGs: COG0765 ABC-type amino acid transport system permease component~InterPro IPR010065:IPR000515~KEGG: tex:Teth514_0469 polar amino acid ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Polar amino acid ABC transporter%2C inner membrane subunit%3B~TIGRFAM: polar amino acid ABC transporter%2C inner membrane subunit~PFAM: Binding-protein-dependent transport system inner membrane component~TIGRFAM: amine acid ABC transporter%2C permease protein%2C 3-TM region%2C His/Glu/Gln/Arg/opine family%3B ectoine/hydroxyectoine ABC transporter%2C permease protein EhuC gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1571 Toce_1572 Toce_1572 Toce_1572 1549758 1550594 - extracellular solute-binding protein family 3 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain~InterPro IPR001638:IPR001320:IPR018313~KEGG: tte:TTE0512 ABC-type amino acid transport system%2C periplasmic component~PFAM: extracellular solute-binding protein family 3~SMART: extracellular solute-binding protein family 3%3B ionotropic glutamate receptor~SPTR: ABC-type amino acid transport system%2C periplasmic component%3B~PFAM: Bacterial extracellular solute-binding proteins%2C family 3 gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1572 Toce_1573 Toce_1573 Toce_1573 1550742 1551047 - conserved hypothetical protein KEGG: csc:Csac_2372 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1573 Toce_1574 Toce_1574 Toce_1574 1551261 1552079 - hypothetical protein KEGG: tet:TTHERM_00702270 Beige/BEACH domain containing protein~SPTR: Beige/BEACH domain containing protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1574 Toce_1575 Toce_1575 Toce_1575 1552121 1555060 - type III restriction protein res subunit InterPro IPR006935~KEGG: tal:Thal_1286 type III restriction protein res subunit~PFAM: type III restriction protein res subunit~SPTR: Type III restriction protein res subunit%3B~PFAM: Type III restriction enzyme%2C res subunit gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1575 Toce_1576 Toce_1576 Toce_1576 1555064 1557619 - DNA methylase N-4/N-6 domain protein COGs: COG2189 Adenine specific DNA methylase Mod~InterPro IPR002941:IPR002295:IPR002052:IPR016059~KEGG: hth:HTH_1616 adenine-specific DNA methylase~PFAM: DNA methylase N-4/N-6 domain protein~SPTR: Adenine-specific DNA methylase%3B~PFAM: DNA methylase gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1576 Toce_1577 Toce_1577 Toce_1577 1557776 1558231 - hypothetical protein KEGG: pth:PTH_2094 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1577 Toce_1578 Toce_1578 Toce_1578 1558221 1558607 - flagellar protein FliS COGs: COG1516 Flagellin-specific chaperone FliS~InterPro IPR003713~KEGG: amt:Amet_0786 flagellar protein FliS~PFAM: flagellar protein FliS~SPTR: Flagellar protein FliS%3B~TIGRFAM: flagellar protein FliS~PFAM: Flagellar protein FliS~TIGRFAM: flagellar biosynthetic protein FliS gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1578 Toce_1579 Toce_1579 Toce_1579 1558623 1560542 - flagellar hook-associated 2 domain protein COGs: COG1345 Flagellar capping protein~InterPro IPR003481:IPR010809~KEGG: dau:Daud_1783 flagellar hook-associated 2 domain-containing protein~PFAM: flagellar hook-associated 2 domain protein%3B flagellar hook-associated protein 2 domain protein~SPTR: Flagellar hook-associated 2 domain protein%3B~PFAM: Flagellar hook-associated protein 2 C-terminus gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1579 Toce_1580 Toce_1580 Toce_1580 1560574 1560942 - flagellar protein FlaG protein InterPro IPR005186~KEGG: csc:Csac_1698 flagellar protein FlaG protein~PFAM: flagellar protein FlaG protein~SPTR: Flagellar protein FlaG protein%3B~PFAM: FlaG protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1580 Toce_1581 Toce_1581 Toce_1581 1561252 1561617 - plasmid stabilization system InterPro IPR007712~KEGG: csc:Csac_2646 plasmid stabilization system protein~PFAM: plasmid stabilization system~SPTR: Plasmid stabilization system%3B~PFAM: Plasmid stabilisation system protein gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1581 Toce_1582 Toce_1582 Toce_1582 1561619 1561984 - prevent-host-death family protein InterPro IPR006442~KEGG: tte:TTE0858 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: prevent-host-death family protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1582 Toce_1583 Toce_1583 Toce_1583 1562460 1562849 + pseudogene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1583 Toce_1584 Toce_1584 Toce_1584 1563124 1563657 + transposase mutator type COGs: COG3328 Transposase and inactivated derivatives~InterPro IPR001207~KEGG: pth:PTH_2357 transposase and inactivated derivatives~PFAM: transposase mutator type~SPTR: Putative uncharacterized protein Tnp3_JF8%3B~PFAM: Transposase%2C Mutator family gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1584 Toce_1585 Toce_1585 Toce_1585 1563676 1564026 + pseudogene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1585 Toce_1586 Toce_1586 Toce_1586 1564365 1565177 - flagellin domain protein COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR001492:IPR001029~KEGG: csc:Csac_1680 flagellin domain-containing protein~PFAM: flagellin domain protein~SPTR: Flagellin domain protein%3B~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1586 Toce_1587 Toce_1587 Toce_1587 1565388 1568414 - glycosyl transferase family 2 InterPro IPR001173:IPR001440:IPR019734:IPR013026~KEGG: cbk:CLL_A0819 glycosyl transferase%2C family 2~PFAM: glycosyl transferase family 2%3B TPR repeat-containing protein~SPTR: Glycosyl transferase%2C family 2%3B~PFAM: Glycosyl transferase family 2 gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1587 Toce_1588 Toce_1588 Toce_1588 1568538 1571609 - glycosyl transferase family 2 COGs: COG0438 Glycosyltransferase~InterProIPR001296:IPR013216:IPR001173:IPR019734:IPR 013026:IPR000276~KEGG: tnp:Tnap_0554 glycosyl transferase family 2~PFAM: glycosyl transferase family 2%3B Methyltransferase type 11%3B glycosyl transferase group 1~SMART: Tetratricopeptide repeat~SPTR: Glycosyl transferase family 2%3B~PFAM: Methyltransferase domain%3B Glycosyl transferases group 1%3B Glycosyl transferase family 2 gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1588 Toce_1589 Toce_1589 Toce_1589 1571609 1572346 - transferase hexapeptide repeat containing protein COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl)~InterPro IPR001451~KEGG: tte:TTE0654 acetyltransferase~PFAM: transferase hexapeptide repeat containing protein~SPTR: Acetyltransferases (The isoleucine patch superfamily)%3B~PFAM: Bacterial transferase hexapeptide (three repeats) gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1589 Toce_1590 Toce_1590 Toce_1590 1572350 1573411 - oxidoreductase domain protein COGs: COG0673 dehydrogenase and related protein~InterPro IPR000683:IPR004104~KEGG: tte:TTE0653 dehydrogenase and related proteins~PFAM: oxidoreductase domain protein%3B Oxidoreductase domain~SPTR: Predicted dehydrogenases and related proteins%3B~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Oxidoreductase family%2C C-terminal alpha/beta domain gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1590 Toce_1591 Toce_1591 Toce_1591 1573424 1574770 - nucleotide sugar dehydrogenase COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase~InterPro IPR017476:IPR001732:IPR014026:IPR014027~KEGG: tte:TTE0652 UDP-N-acetyl-D-mannosaminuronate dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase~PRIAM: UDP-glucose 6-dehydrogenase~SPTR: UDP-N-acetyl-D-mannosaminuronate dehydrogenase%3B~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C central domain%3B UDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain~TIGRFAM: nucleotide sugar dehydrogenase gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1591 Toce_1592 Toce_1592 Toce_1592 1574776 1575882 - DegT/DnrJ/EryC1/StrS aminotransferase COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis~InterPro IPR000653~KEGG: tte:TTE0651 cell wall biogenesis regulatory protein~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase~SPTR: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis%3B~PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1592 Toce_1593 Toce_1593 Toce_1593 1575912 1576139 - carbon storage regulator%2C CsrA COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)~InterPro IPR003751~KEGG: tde:TDE2355 carbon storage regulator~PFAM: carbon storage regulator~SPTR: Carbon storage regulator homolog%3B~TIGRFAM: carbon storage regulator~PFAM: Global regulator protein family~TIGRFAM: carbon storage regulator (csrA) gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1593 Toce_1594 Toce_1594 Toce_1594 1576146 1576592 - protein of unknown function DUF180 COGs: COG1699 conserved hypothetical protein~InterPro IPR003775~KEGG: eel:EUBELI_00235 hypothetical protein~PFAM: protein of unknown function DUF180~SPTR: Flagellar assembly factor fliW%3B~PFAM: FliW protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1594 Toce_1595 Toce_1595 Toce_1595 1576626 1577201 - hypothetical protein KEGG: amt:Amet_0729 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1595 Toce_1596 Toce_1596 Toce_1596 1577252 1578136 - flagellar hook-associated protein 3 COGs: COG1344 Flagellin and related hook-associated protein~InterPro IPR013384:IPR001492:IPR001029~KEGG: cth:Cthe_2242 flagellar hook-associated protein FlgL~PFAM: flagellin domain protein~SPTR: Flagellar hook-associated protein 3%3B~TIGRFAM: flagellar hook-associated protein 3~PFAM: Bacterial flagellin N-terminal helical region%3B Bacterial flagellin C-terminal helical region~TIGRFAM: flagellar hook-associated protein 3 gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1596 Toce_1597 Toce_1597 Toce_1597 1578145 1579542 - flagellar hook-associated protein FlgK COGs: COG1256 Flagellar hook-associated protein~InterPro IPR002371:IPR001444:IPR010930~KEGG: tit:Thit_0470 flagellar hook-associated protein FlgK~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein~SPTR: Flagellar hook-associated protein FlgK%3B~TIGRFAM: flagellar hook-associated protein FlgK~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar hook-associated protein FlgK gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1597 Toce_1598 Toce_1598 Toce_1598 1579561 1580046 - FlgN family protein InterPro IPR007809~KEGG: cce:Ccel_0093 FlgN family protein~PFAM: FlgN family protein~SPTR: FlgN family protein%3B~PFAM: FlgN protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1598 Toce_1599 Toce_1599 Toce_1599 1580060 1580425 - Anti-sigma-28 factor FlgM family protein InterPro IPR007412~KEGG: swo:Swol_0190 putative anti-sigma-28 factor%2C FlgM~PFAM: Anti-sigma-28 factor FlgM family protein~SPTR: Anti-sigma-28 factor%2C FlgM%3B~TIGRFAM: Anti-sigma-28 factor FlgM family protein~PFAM: Anti-sigma-28 factor%2C FlgM gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1599 Toce_1600 Toce_1600 Toce_1600 1580492 1580896 - Flagellar operon protein YvyF InterPro IPR022258~KEGG: aoe:Clos_2524 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: Flagellar operon protein YvyF gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1600 Toce_1601 Toce_1601 Toce_1601 1580915 1581637 - phosphoribosyltransferase COGs: COG1040 amidophosphoribosyltransferase~KEGG: dal:Dalk_1937 phosphoribosyltransferase~SPTR: Phosphoribosyltransferase%3B~PFAM: Phosphoribosyl transferase domain~TIGRFAM: comF family protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1601 Toce_1602 Toce_1602 Toce_1602 1581799 1581936 + hypothetical protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1602 Toce_1603 Toce_1603 Toce_1603 1582046 1582588 - SSU ribosomal protein S30P%3B sigma 54 modulation protein COGs: COG1544 Ribosome-associated protein Y (PSrp-1)~InterPro IPR003489~KEGG: pth:PTH_2754 ribosome-associated protein Y~PFAM: sigma 54 modulation protein/ribosomal protein S30EA~SPTR: Ribosome-associated protein Y%3B~TIGRFAM: ribosomal subunit interface protein~PFAM: Sigma 54 modulation protein / S30EA ribosomal protein~TIGRFAM: ribosomal subunit interface protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1603 Toce_1604 Toce_1604 Toce_1604 1582681 1584336 - phosphoribulokinase/uridine kinase COGs: COG0572 Uridine kinase~KEGG: amt:Amet_3643 phosphoribulokinase/uridine kinase~SPTR: Phosphoribulokinase/uridine kinase%3B~PFAM: Phosphoribulokinase / Uridine kinase family gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1604 Toce_1605 Toce_1605 Toce_1605 1584427 1585278 - protein of unknown function DUF477 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type~InterPro IPR007621~KEGG: ate:Athe_0034 protein of unknown function DUF477~PFAM: protein of unknown function DUF477~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF477) gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1605 Toce_1606 Toce_1606 Toce_1606 1585281 1585865 - LemA family protein COGs: COG1704 conserved hypothetical protein~InterPro IPR007156~KEGG: tit:Thit_0327 LemA family protein~PFAM: LemA family protein~SPTR: LemA family protein%3B~PFAM: LemA family gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1606 Toce_1607 Toce_1607 Toce_1607 1586095 1587057 + TRAP transporter solute receptor%2C TAXI family COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component~InterPro IPR011852:IPR001638~KEGG: drm:Dred_3213 TRAP transporter solute receptor TAXI family protein~SMART: extracellular solute-binding protein family 3~SPTR: TRAP transporter%3B~TIGRFAM: TRAP transporter solute receptor%2C TAXI family~PFAM: NMT1/THI5 like~TIGRFAM: TRAP transporter solute receptor%2C TAXI family gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1607 Toce_1608 Toce_1608 Toce_1608 1587105 1587626 + Domain of unknown function DUF1850 COGs: COG4729 conserved hypothetical protein~InterPro IPR015001~KEGG: drm:Dred_3212 hypothetical protein~PFAM: Domain of unknown function DUF1850~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1850) gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1608 Toce_1609 Toce_1609 Toce_1609 1587604 1589580 + TRAP transporter%2C 4TM/12TM fusion protein COGs: COG4666 TRAP-type uncharacterized transport system fused permease components~InterPro IPR011853:IPR010656~KEGG: drm:Dred_3211 TRAP transporter%2C 4TM/12TM fusion protein~PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit~SPTR: TRAP transporter%2C 4TM/12TM fusion protein%3B~TIGRFAM: TRAP transporter%2C 4TM/12TM fusion protein~PFAM: FxsA cytoplasmic membrane protein%3B DctM-like transporters~TIGRFAM: TRAP transporter%2C 4TM/12TM fusion protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1609 Toce_1610 Toce_1610 Toce_1610 1589597 1590247 - sporulation protein YtaF COGs: COG1971 membrane protein~InterPro IPR014205:IPR003810~KEGG: bpf:BpOF4_03320 hypothetical protein~PFAM: protein of unknown function DUF204~SPTR: Putative uncharacterized protein%3B~TIGRFAM: sporulation protein YtaF~PFAM: Domain of unknown function DUF~TIGRFAM: putative sporulation protein YtaF gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1610 Toce_1611 Toce_1611 Toce_1611 1590271 1591059 - ABC transporter related protein COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR003439:IPR003593:IPR001827:IPR017871~KEGG: sti:Sthe_2706 ABC transporter related protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1611 Toce_1612 Toce_1612 Toce_1612 1591075 1591908 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: rpc:RPC_0846 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1612 Toce_1613 Toce_1613 Toce_1613 1591960 1593042 - extracellular solute-binding protein family 3 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR001638~KEGG: eba:p2A128 ABC transporter substrate-binding protein~SMART: extracellular solute-binding protein family 3~SPTR: NLPA lipoprotein%3B~PFAM: NMT1/THI5 like gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1613 Toce_1614 Toce_1614 Toce_1614 1593297 1594772 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1614 Toce_1615 Toce_1615 Toce_1615 1594851 1595999 - fatty acid synthesis plsX protein COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme~InterPro IPR003664:IPR012116~KEGG: aoe:Clos_0960 glycine reductase~PFAM: fatty acid synthesis plsX protein~SPTR: Glycine reductase%3B~PFAM: Fatty acid synthesis protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1615 Toce_1616 Toce_1616 Toce_1616 1595986 1597533 - 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III InterPro IPR013751~KEGG: tte:TTE1875 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III~SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase III%3B~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1616 Toce_1617 Toce_1617 Toce_1617 1597571 1597804 - selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family InterPro IPR010187~KEGG: cpo:COPRO5265_0224 glycine reductase complex component B subunit gamma (selenoprotein PB gamma)~SPTR: Glycine reductase complex component B subunit gamma (Selenoprotein PB gamma)%3B~TIGRFAM: selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family~TIGRFAM: selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1617 Toce_1618 Toce_1618 Toce_1618 1597832 1598881 - selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family InterPro IPR010187:IPR001986~KEGG: cpo:COPRO5265_0224 glycine reductase complex component B subunit gamma (selenoprotein PB gamma)~SPTR: Glycine reductase complex component B subunit gamma (Selenoprotein PB gamma)%3B~TIGRFAM: selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family~PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)~TIGRFAM: selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1618 Toce_1619 Toce_1619 Toce_1619 1598902 1599231 - glycine reductase complex selenoprotein A InterPro IPR006812~KEGG: cpo:COPRO5265_0223 glycine/sarcosine/betaine reductase complex component A1 (selenoprotein PA 1) (thioredoxinreductase complex A 1)~PFAM: glycine reductase complex selenoprotein A~SPTR: Glycine/sarcosine/betaine reductase complex component A1 (Selenoprotein PA 1) (Thioredoxinreductase complex A 1)%3B~PFAM: Glycine reductase complex selenoprotein A gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1619 Toce_1620 Toce_1620 Toce_1620 1599247 1599372 - glycine reductase complex selenoprotein A InterPro IPR006812~KEGG: nth:Nther_0473 glycine/sarcosine/betaine reductase complex protein A~PFAM: glycine reductase complex selenoprotein A~SPTR: Betaine reductase%3B~PFAM: Glycine reductase complex selenoprotein A gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1620 Toce_1621 Toce_1621 Toce_1621 1599397 1600680 - Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits InterPro IPR015417:IPR016585~KEGG: tte:TTE1879 GrdE proprotein~PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits~SPTR: GrdE proprotein%3B~PFAM: Glycine/sarcosine/betaine reductase component B subunits gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1621 Toce_1622 Toce_1622 Toce_1622 1600694 1601008 - Thioredoxin domain protein COGs: COG3118 Thioredoxin domain-containing protein~InterPro IPR013766:IPR017936~KEGG: tte:TTE1880 thiol-disulfide isomerase and thioredoxins~PFAM: Thioredoxin domain~SPTR: Thiol-disulfide isomerase and thioredoxins%3B~PFAM: Thioredoxin~TIGRFAM: thioredoxin gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1622 Toce_1623 Toce_1623 Toce_1623 1601386 1601805 - conserved hypothetical protein KEGG: tte:TTE1060 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: PIN domain~TIGRFAM: conserved hypothetical protein TIGR00305 gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1623 Toce_1624 Toce_1624 Toce_1624 1601789 1602040 - prevent-host-death family protein InterPro IPR006442~KEGG: tte:TTE1059 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: prevent-host-death family protein~PFAM: Phd_YefM~TIGRFAM: prevent-host-death family protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1624 Toce_1625 Toce_1625 Toce_1625 1602286 1602426 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG0450 Peroxiredoxin~InterPro IPR000866~KEGG: drt:Dret_1862 peroxiredoxin-like protein~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Peroxiredoxin-like protein%3B~PFAM: AhpC/TSA family gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1625 Toce_1626 Toce_1626 Toce_1626 1602487 1602882 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen COGs: COG0450 Peroxiredoxin~InterPro IPR000866:IPR017936~KEGG: dal:Dalk_1204 alkyl hydroperoxide reductase~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~SPTR: Alkyl hydroperoxide reductase%3B~PFAM: C-terminal domain of 1-Cys peroxiredoxin%3B AhpC/TSA family gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1626 Toce_1627 Toce_1627 Toce_1627 1602936 1603232 - transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: pth:PTH_1500 transcriptional regulator~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Predicted transcriptional regulator%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1627 Toce_1628 Toce_1628 Toce_1628 1603250 1603915 - protein of unknown function DUF1648 COGs: COG5658 integral membrane protein~InterPro IPR012867~KEGG: tpd:Teth39_1876 hypothetical protein~PFAM: protein of unknown function DUF1648~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1648) gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1628 Toce_1629 Toce_1629 Toce_1629 1604202 1604933 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR003593~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1629 Toce_1630 Toce_1630 Toce_1630 1604927 1606450 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1630 Toce_1631 Toce_1631 Toce_1631 1607097 1608326 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894:IPR000169~KEGG: chy:CHY_1117 ISChy4%2C transposase~PFAM: Integrase catalytic region~SPTR: ISChy4%2C transposase%3B~PFAM: Mu transposase%2C C-terminal%3B Integrase core domain gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1631 Toce_1632 Toce_1632 Toce_1632 1608323 1609093 + IstB transposition helper protein COGs: COG1484 DNA replication protein~InterPro IPR002611:IPR001270:IPR003593~KEGG: chy:CHY_1116 ISChy4%2C transposition helper protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: ISChy4%2C transposition helper protein%3B~PFAM: IstB-like ATP binding protein gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1632 Toce_1633 Toce_1633 Toce_1633 1609300 1610524 - pseudogene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1633 Toce_1634 Toce_1634 Toce_1634 1610841 1611482 + Domain of unknown function DUF1906 InterPro IPR015020~KEGG: rfr:Rfer_1853 hypothetical protein~PFAM: Domain of unknown function DUF1906~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF1906) gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1634 Toce_1635 Toce_1635 Toce_1635 1611631 1613106 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1635 Toce_1636 Toce_1636 Toce_1636 1613156 1614280 - conserved hypothetical protein KEGG: tte:TTE0433 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: BNR/Asp-box repeat gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1636 Toce_1637 Toce_1637 Toce_1637 1614570 1615004 + Sigma-70 region 4 type 2 InterPro IPR013249~KEGG: pth:PTH_1893 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24-like protein~PFAM: Sigma-70 region 4 type 2~SPTR: DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog%3B~PFAM: Sigma-70%2C region 4~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1637 Toce_1638 Toce_1638 Toce_1638 1615070 1615207 - pseudogene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1638 Toce_1639 Toce_1639 Toce_1639 1615282 1615573 + pseudogene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1639 Toce_1640 Toce_1640 Toce_1640 1615827 1616705 - 8-oxoguanine DNA glycosylase domain protein COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase~InterPro IPR012904:IPR003265~KEGG: tte:TTE0574 3-methyladenine DNA glycosylase~PFAM: 8-oxoguanine DNA glycosylase domain protein%3B HhH-GPD family protein~SMART: HhH-GPD family protein~SPTR: 3-Methyladenine DNA glycosylase%3B~PFAM: 8-oxoguanine DNA glycosylase%2C N-terminal domain%3B HhH-GPD superfamily base excision DNA repair protein~TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg) gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1640 Toce_1641 Toce_1641 Toce_1641 1616928 1617428 - nitroreductase COGs: COG0778 Nitroreductase~InterPro IPR000415~KEGG: tte:TTE1807 nitroreductase~PFAM: nitroreductase~SPTR: Nitroreductase%3B~PFAM: Nitroreductase family gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1641 Toce_1642 Toce_1642 Toce_1642 1617439 1620576 - Isoleucyl-tRNA synthetase COGs: COG0060 Isoleucyl-tRNA synthetase~InterProIPR002301:IPR002300:IPR013155:IPR015905:IPR 001412~KEGG: cac:CAC3038 isoleucyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ia%3B tRNA synthetase valyl/leucyl anticodon-binding~SPTR: Putative uncharacterized protein%3B~TIGRFAM: isoleucyl-tRNA synthetase~PFAM: tRNA synthetases class I (I%2C L%2C M and V)%3B Anticodon-binding domain~TIGRFAM: isoleucyl-tRNA synthetase gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1642 Toce_1643 Toce_1643 Toce_1643 1621054 1622214 + Integrase catalytic region InterPro IPR001584~KEGG: adg:Adeg_0482 integrase catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1643 Toce_1644 Toce_1644 Toce_1644 1622193 1623266 - protein of unknown function DUF43 COGs: COG1568 methyltransferase~InterPro IPR002723:IPR014435~KEGG: tit:Thit_1686 protein of unknown function DUF43~PFAM: protein of unknown function DUF43~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF43 gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1644 Toce_1645 Toce_1645 Toce_1645 1623533 1625281 + ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR001140:IPR003439:IPR017940:IPR003593:IPR 017871~KEGG: amt:Amet_3159 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1645 Toce_1646 Toce_1646 Toce_1646 1625298 1627373 + ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR001140:IPR003439:IPR017940:IPR003593:IPR 017871~KEGG: amt:Amet_3160 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1646 Toce_1647 Toce_1647 Toce_1647 1627524 1628333 - undecaprenol kinase COGs: COG1968 Uncharacterized bacitracin resistance protein~InterPro IPR003824~KEGG: tit:Thit_0956 undecaprenol kinase~PFAM: Bacitracin resistance protein BacA~SPTR: Undecaprenol kinase%3B~TIGRFAM: undecaprenol kinase~PFAM: Bacitracin resistance protein BacA~TIGRFAM: undecaprenyl-diphosphatase UppP gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1647 Toce_1648 Toce_1648 Toce_1648 1628336 1628977 - phosphoribosyltransferase COGs: COG1926 phosphoribosyltransferase~InterPro IPR000836~KEGG: ate:Athe_0585 phosphoribosyltransferase~PFAM: phosphoribosyltransferase~SPTR: Phosphoribosyltransferase%3B~PFAM: Phosphoribosyl transferase domain gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1648 Toce_1649 Toce_1649 Toce_1649 1629060 1629464 + nucleoside diphosphate kinase COGs: COG0105 Nucleoside diphosphate kinase~InterPro IPR001564~KEGG: tte:TTE0747 nucleoside diphosphate kinase~PFAM: nucleoside diphosphate kinase~PRIAM: Nucleoside-diphosphate kinase~SMART: nucleoside diphosphate kinase~SPTR: Nucleoside diphosphate kinase%3B~PFAM: Nucleoside diphosphate kinase gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1649 Toce_1650 Toce_1650 Toce_1650 1629467 1630501 - Quinolinate phosphoribosyl transferase COGs: COG1488 Nicotinic acid phosphoribosyltransferase~InterPro IPR002638:IPR007229~KEGG: tte:TTE0877 nicotinate phosphoribosyltransferase~PFAM: Quinolinate phosphoribosyl transferase~SPTR: Quinolinate phosphoribosyl transferase%2C C-terminal domain protein%3B~PFAM: Quinolinate phosphoribosyl transferase%2C C-terminal domain%3B Quinolinate phosphoribosyl transferase%2C N-terminal domain gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1650 Toce_1651 Toce_1651 Toce_1651 1630530 1631045 - Lytic transglycosylase catalytic COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains)~InterPro IPR008258:IPR000189~KEGG: tpd:Teth39_1472 lytic transglycosylase%2C catalytic~PFAM: Lytic transglycosylase catalytic~SPTR: Lytic transglycosylase%2C catalytic%3B~PFAM: Transglycosylase SLT domain gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1651 Toce_1652 Toce_1652 Toce_1652 1631045 1631683 - dephospho-CoA kinase COGs: COG0237 Dephospho-CoA kinase~InterPro IPR001977~KEGG: tte:TTE0875 dephospho-CoA kinase~PFAM: Dephospho-CoA kinase~PRIAM: Dephospho-CoA kinase~SPTR: Dephospho-CoA kinase%3B~TIGRFAM: dephospho-CoA kinase~PFAM: Dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1652 Toce_1653 Toce_1653 Toce_1653 1631697 1634291 - DNA polymerase I COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains~InterProIPR018320:IPR020046:IPR020047:IPR002562:IPR 001098:IPR002298:IPR002421:IPR008918:IPR019760~KEGG: pth:PTH_1976 DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B 5'-3' exonuclease%2C SAM-fold domain%3B 3'-5' exonuclease~SMART: 5'-3' exonuclease%3B Helix-hairpin-helix domain protein class 2%3B 3'-5' exonuclease%3B DNA-directed DNA polymerase~SPTR: DNA polymerase I%3B~TIGRFAM: DNA polymerase I~PFAM: 5'-3' exonuclease%2C C-terminal SAM fold%3B 3'-5' exonuclease%3B DNA polymerase family A%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain~TIGRFAM: DNA polymerase I gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1653 Toce_1654 Toce_1654 Toce_1654 1634472 1634837 + helix-turn-helix domain protein InterPro IPR001387~KEGG: cce:Ccel_0058 transcriptional regulator%2C XRE family~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Transcriptional regulator%3B~PFAM: Helix-turn-helix gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1654 Toce_1655 Toce_1655 Toce_1655 1634865 1635875 - Radical SAM domain protein COGs: COG1533 DNA repair photolyase~InterPro IPR007197~KEGG: csc:Csac_0382 DNA repair photolyase-like protein~PFAM: Radical SAM domain protein~SPTR: DNA repair photolyase-like protein%3B~manually curated gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1655 Toce_1656 Toce_1656 Toce_1656 1635844 1636680 - purine or other phosphorylase family 1 COGs: COG0775 Nucleoside phosphorylase~InterPro IPR000845~KEGG: dth:DICTH_0360 hypothetical protein~PFAM: purine or other phosphorylase family 1~SPTR: Putative uncharacterized protein%3B~PFAM: Phosphorylase superfamily gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1656 Toce_1657 Toce_1657 Toce_1657 1636828 1637460 - hypothetical protein KEGG: drm:Dred_1389 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1657 Toce_1658 Toce_1658 Toce_1658 1637865 1638098 + ATP/GTP binding protein KEGG: mfl:Mfl298 ATP/GTP binding protein~SPTR: Putative uncharacterized protein gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1658 Toce_1659 Toce_1659 Toce_1659 1638150 1638839 - ErfK/YbiS/YcfS/YnhG family protein COGs: COG1376 conserved hypothetical protein~InterPro IPR005490:IPR002477~KEGG: drm:Dred_2694 ErfK/YbiS/YcfS/YnhG family protein~PFAM: ErfK/YbiS/YcfS/YnhG family protein%3B Peptidoglycan-binding domain 1 protein~SPTR: ErfK/YbiS/YcfS/YnhG family protein%3B~PFAM: Putative peptidoglycan binding domain%3B L%2CD-transpeptidase catalytic domain gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1659 Toce_1660 Toce_1660 Toce_1660 1638909 1639577 + glycosyl transferase family 2 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis~InterPro IPR001173~KEGG: adg:Adeg_1389 glycosyl transferase family 2~PFAM: glycosyl transferase family 2~SPTR: Glycosyl transferase family 2%3B~PFAM: Glycosyl transferase family 2 gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1660 Toce_1661 Toce_1661 Toce_1661 1639623 1640438 - alpha/beta hydrolase fold protein COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)~InterPro IPR000073:IPR000639~KEGG: cbl:CLK_0246 non-haem haloperoxidase family protein~PFAM: alpha/beta hydrolase fold~SPTR: Non-heme haloperoxidase family protein%3B~PFAM: alpha/beta hydrolase fold gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1661 Toce_1662 Toce_1662 Toce_1662 1640604 1641917 - hybrid cluster protein COGs: COG1151 6Fe-6S prismane cluster-containing protein~InterPro IPR010048:IPR004137~KEGG: amt:Amet_4560 hydroxylamine reductase~PFAM: Prismane~SPTR: Hybrid cluster protein%3B~TIGRFAM: hybrid cluster protein~manually curated~PFAM: Prismane/CO dehydrogenase family~TIGRFAM: hydroxylamine reductase gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1662 Toce_1663 Toce_1663 Toce_1663 1642048 1642284 + hypothetical protein KEGG: cac:CAC3450 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2935) gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1663 Toce_1664 Toce_1664 Toce_1664 1642602 1642880 + hypothetical protein KEGG: gym:GYMC10_5290 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1664 Toce_1665 Toce_1665 Toce_1665 1645079 1646299 - transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: tit:Thit_1358 transposase IS116/IS110/IS902 family protein~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Transposase IS116/IS110/IS902 family protein%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1665 Toce_1666 Toce_1666 Toce_1666 1646749 1647051 + Carboxymuconolactone decarboxylase InterPro IPR003779~KEGG: mta:Moth_1895 alkylhydroperoxidase AhpD core~PFAM: Carboxymuconolactone decarboxylase~SPTR: Alkylhydroperoxidase like protein%2C AhpD family%3B~PFAM: Carboxymuconolactone decarboxylase family~TIGRFAM: alkylhydroperoxidase AhpD family core domain gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1666 Toce_1667 Toce_1667 Toce_1667 1647396 1651043 + 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase.%2C 5'-nucleotidase COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase~InterProIPR004843:IPR008334:IPR001119:IPR006179:IPR 006146~KEGG: cpo:COPRO5265_0800 multifunctional protein: 5-nucleotidase 2%2C3-cyclic-nucleotide 2-phosphodiesterase~PFAM: 5'-Nucleotidase domain protein%3B metallophosphoesterase%3B S-layer domain protein~PRIAM: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase.%2C 5'-nucleotidase~SPTR: Multifunctional protein: 5-nucleotidase 2%2C3-cyclic-nucleotide 2-phosphodiesterase%3B~PFAM: 5'-nucleotidase%2C C-terminal domain%3B Calcineurin-like phosphoesterase%3B S-layer homology domain gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1667 Toce_1668 Toce_1668 Toce_1668 1651623 1652693 - copper amine oxidase domain protein InterPro IPR012854~KEGG: dae:Dtox_4298 copper amine oxidase domain protein~PFAM: copper amine oxidase domain protein~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1668 Toce_1669 Toce_1669 Toce_1669 1652732 1653027 - pseudogene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1669 Toce_1670 Toce_1670 Toce_1670 1653936 1656785 - Excinuclease ABC subunit A COGs: COG0178 Excinuclease ATPase subunit~InterPro IPR004602:IPR003439:IPR003593:IPR017871~KEGG: excinuclease ABC%2C A subunit~PFAM: ABC transporter related~SPTR: Excinuclease ATPase subunit%3B~TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter~TIGRFAM: excinuclease ABC%2C A subunit gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1670 Toce_1671 Toce_1671 Toce_1671 1656802 1658817 - Excinuclease ABC subunit B COGs: COG0556 Helicase subunit of the DNA excision repair complex~InterProIPR004807:IPR006935:IPR001650:IPR001943:IPR 014021:IPR014001~KEGG: tit:Thit_1771 excinuclease ABC%2C B subunit~PFAM: helicase domain protein%3B type III restriction protein res subunit%3B UvrB/UvrC protein~SMART: DEAD-like helicase %3B helicase domain protein~SPTR: Excinuclease ABC%2C B subunit%3B~TIGRFAM: excinuclease ABC%2C B subunit~PFAM: Helicase conserved C-terminal domain%3B UvrB/uvrC motif%3B Type III restriction enzyme%2C res subunit%3B Ultra-violet resistance protein B~TIGRFAM: excinuclease ABC%2C B subunit gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1671 Toce_1672 Toce_1672 Toce_1672 1658924 1660792 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR001140:IPR003439:IPR017940:IPR003593:IPR 017871~KEGG: dae:Dtox_2733 ABC transporter related~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1672 Toce_1673 Toce_1673 Toce_1673 1660789 1662516 - ABC transporter related protein COGs: COG1132 ABC-type multidrug transport system ATPase and permease components~InterProIPR001140:IPR003439:IPR017940:IPR003593:IPR 017871~KEGG: amt:Amet_2176 ABC transporter%2C transmembrane region~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~SPTR: ABC transporter%3B~PFAM: ABC transporter transmembrane region%3B ABC transporter gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1673 Toce_1674 Toce_1674 Toce_1674 1662516 1662968 - transcriptional regulator%2C MarR family COGs: COG1846 Transcriptional regulators~InterPro IPR000835:IPR001367~KEGG: aoe:Clos_2679 MarR family transcriptional regulator~PFAM: regulatory protein MarR~SMART: regulatory protein MarR%3B iron dependent repressor~SPTR: Transcriptional regulator%2C MarR family%3B~PFAM: MarR family gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1674 Toce_1675 Toce_1675 Toce_1675 1663396 1664265 - integral membrane protein KEGG: cbo:CBO2473 integral membrane protein~SPTR: Putative integral membrane protein%3B~PFAM: Sulfite exporter TauE/SafE gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1675 Toce_1676 Toce_1676 Toce_1676 1664579 1665802 + transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: pth:PTH_2606 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Hypothetical transposase%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1676 Toce_1677 Toce_1677 Toce_1677 1665872 1666912 - proline racemase COGs: COG3938 Proline racemase~InterPro IPR008794:IPR020053~KEGG: amt:Amet_0671 proline racemase~PFAM: proline racemase~PRIAM: Proline racemase~SPTR: Proline racemase%3B~PFAM: Proline racemase gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1677 Toce_1678 Toce_1678 Toce_1678 1666919 1667383 - D-proline reductase (dithiol) InterPro IPR015417~KEGG: cbl:CLK_1856 PrdE protein~PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits~PRIAM: D-proline reductase (dithiol)~SPTR: D-proline reductase (Dithiol)%3B~PFAM: Glycine/sarcosine/betaine reductase component B subunits gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1678 Toce_1679 Toce_1679 Toce_1679 1667396 1668274 - D-proline reductase (dithiol) KEGG: cbf:CLI_3802 glycine/sarcosine/betaine reductase%2C component B%2C subunits alpha and beta~PRIAM: D-proline reductase (dithiol)~SPTR: Glycine/sarcosine/betaine reductase%2C component B%2C subunits alpha and beta%3B~PFAM: Glycine/sarcosine/betaine reductase component B subunits gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1679 Toce_1680 Toce_1680 Toce_1680 1668358 1668609 - putative D-proline reductase%2C PrdB subunit KEGG: cbf:CLI_2520 putative D-proline reductase%2C PrdB subunit%2C selenocysteine-containing~SPTR: Putative D-proline reductase%2C PrdB subunit%2C selenocysteine-containing gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1680 Toce_1681 Toce_1681 Toce_1681 1668631 1669083 - D-proline reductase (dithiol) KEGG: aoe:Clos_0030 D-proline reductase (dithiol)~PRIAM: D-proline reductase (dithiol)~SPTR: D-proline reductase (Dithiol)%3B~PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)~TIGRFAM: selenoprotein B%2C glycine/betaine/sarcosine/D-proline reductase family gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1681 Toce_1682 Toce_1682 Toce_1682 1669089 1669289 - conserved hypothetical protein KEGG: cbf:CLI_3801 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1682 Toce_1683 Toce_1683 Toce_1683 1669302 1671056 - D-proline reductase (dithiol) InterPro IPR015417~KEGG: cbl:CLK_3050 glycine/sarcosine/betaine reductase%2C component B%2C subunits alpha and beta~PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits~PRIAM: D-proline reductase (dithiol)~SPTR: Glycine/sarcosine/betaine reductase%2C component B%2C subunits alpha and beta%3B~PFAM: Glycine/sarcosine/betaine reductase component B subunits gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1683 Toce_1684 Toce_1684 Toce_1684 1671076 1672365 - Respiratory-chain NADH dehydrogenase domain 51 kDa subunit COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC~InterPro IPR011538:IPR019554~KEGG: cbl:CLK_3051 respiratory-chain NADH dehydrogenase family protein~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain~SPTR: Respiratory-chain NADH dehydrogenase family protein%3B~PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit%3B SLBB domain~TIGRFAM: electron transport complex%2C RnfABCDGE type%2C C subunit gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1684 Toce_1685 Toce_1685 Toce_1685 1672617 1674029 - PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR013656:IPR002078:IPR002197:IPR 020441:IPR003593:IPR000169:IPR005479~KEGG: drm:Dred_1719 sigma-54 dependent trancsriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold-4 domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma-54-dependent transcriptional activator%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1685 Toce_1686 Toce_1686 Toce_1686 1674283 1674480 - hypothetical protein KEGG: cgr:CAGL0G02497g hypothetical protein~SPTR: Similar to uniprot|Q02455 Saccharomyces cerevisiae YKR095w MLP1 gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1686 Toce_1687 Toce_1687 Toce_1687 1674737 1675981 - PDZ/DHR/GLGF domain protein InterPro IPR001478~KEGG: tpd:Teth39_0567 PDZ/DHR/GLGF domain-containing protein~PFAM: PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~SPTR: PDZ/DHR/GLGF domain protein%3B~PFAM: PDZ domain (Also known as DHR or GLGF) gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1687 Toce_1688 Toce_1688 Toce_1688 1675993 1677240 - carboxyl-terminal protease COGs: COG0793 Periplasmic protease~InterPro IPR004447:IPR001478:IPR005151~KEGG: tit:Thit_1774 carboxyl-terminal protease~PFAM: peptidase S41%3B PDZ/DHR/GLGF domain protein~PRIAM: C-terminal processing peptidase~SMART: peptidase S41%3B PDZ/DHR/GLGF domain protein~SPTR: Carboxyl-terminal protease%3B~TIGRFAM: carboxyl-terminal protease~PFAM: Peptidase family S41%3B PDZ domain (Also known as DHR or GLGF)~TIGRFAM: C-terminal peptidase (prc) gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1688 Toce_1689 Toce_1689 Toce_1689 1677310 1678458 - Peptidase M23 COGs: COG4942 Membrane-bound metallopeptidase~InterPro IPR016047~KEGG: tte:TTE1975 membrane proteins related to metalloendopeptidase~PFAM: Peptidase M23~SPTR: Membrane proteins related to metalloendopeptidases%3B~PFAM: Peptidase family M23 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1689 Toce_1690 Toce_1690 Toce_1690 1678480 1679376 - protein of unknown function DUF214 COGs: COG2177 Cell division protein~InterPro IPR003838~KEGG: tte:TTE1976 cell division protein~PFAM: protein of unknown function DUF214~SPTR: Cell division protein%3B~PFAM: Predicted permease gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1690 Toce_1691 Toce_1691 Toce_1691 1679342 1680028 - cell division ATP-binding protein FtsE COGs: COG2884 ATPase involved in cell division~InterPro IPR005286:IPR003439:IPR003593:IPR017871~KEGG: pth:PTH_2747 ATPase~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Predicted ATPase%3B~TIGRFAM: cell division ATP-binding protein FtsE~PFAM: ABC transporter~TIGRFAM: cell division ATP-binding protein FtsE%3B Type II (General) Secretory Pathway (IISP) Family protein gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1691 Toce_1692 Toce_1692 Toce_1692 1680149 1680628 - 6%2C7-dimethyl-8-ribityllumazine synthase COGs: COG0054 Riboflavin synthase beta-chain~InterPro IPR002180~KEGG: pth:PTH_1758 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase~SPTR: 6%2C7-dimethyl-8-ribityllumazine synthase%3B~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1692 Toce_1693 Toce_1693 Toce_1693 1680651 1681853 - GTP cyclohydrolase II COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase~InterPro IPR000422:IPR000926:IPR016299~KEGG: cth:Cthe_0106 GTP cyclohydrolase II~PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II~SPTR: GTP cyclohydrolase II%3B~TIGRFAM: 3%2C4-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II~PFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2-butanone 4-phosphate synthase gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1693 Toce_1694 Toce_1694 Toce_1694 1681894 1682541 - riboflavin synthase%2C alpha subunit COGs: COG0307 Riboflavin synthase alpha chain~InterPro IPR001783~KEGG: gka:GK2296 riboflavin synthase subunit alpha~PFAM: Lumazine-binding protein~PRIAM: Riboflavin synthase~SPTR: Riboflavin synthase%2C alpha subunit%3B~TIGRFAM: riboflavin synthase%2C alpha subunit~PFAM: Lumazine binding domain~TIGRFAM: riboflavin synthase%2C alpha subunit gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1694 Toce_1695 Toce_1695 Toce_1695 1682526 1683647 - diaminohydroxyphosphoribosylaminopyrimidine deaminase %3B5-amino-6-(5-phosphoribosylamino)uracil reductase COGs: COG0117 Pyrimidine deaminase~InterProIPR004794:IPR011549:IPR002125:IPR002734:IPR 016192~KEGG: adg:Adeg_1982 riboflavin biosynthesis protein RibD~PFAM: bifunctional deaminase-reductase domain protein%3B CMP/dCMP deaminase zinc-binding~SPTR: Riboflavin biosynthesis protein RibD%3B~TIGRFAM: riboflavin biosynthesis protein RibD~PFAM: RibD C-terminal domain%3B Cytidine and deoxycytidylate deaminase zinc-binding region~TIGRFAM: riboflavin-specific deaminase C-terminal domain%3B 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase%2C archaeal%3B riboflavin biosynthesis protein RibD gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1695 Toce_1696 Toce_1696 Toce_1696 1684017 1687565 - glycosidase related protein COGs: COG2152 glycosylase~InterPro IPR007184~KEGG: swo:Swol_1919 glycosylase-like protein~PFAM: glycosidase related protein~SPTR: Glycosylase-like protein%3B~PFAM: Domain of unknown function (DUF377) gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1696 Toce_1697 Toce_1697 Toce_1697 1687577 1688602 - conserved hypothetical protein KEGG: swo:Swol_1917 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1697 Toce_1698 Toce_1698 Toce_1698 1688595 1689755 - glycosyl transferase group 1 COGs: COG0438 Glycosyltransferase~InterPro IPR001296~KEGG: swo:Swol_1916 glycosyltransferase~PFAM: glycosyl transferase group 1~SPTR: Glycosyltransferase%3B~PFAM: Glycosyl transferases group 1 gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1698 Toce_1699 Toce_1699 Toce_1699 1690022 1690768 - transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551:IPR015358:IPR012925~KEGG: bcy:Bcer98_3564 MerR family transcriptional regulator~PFAM: TipAS antibiotic-recognition domain protein%3B regulatory protein MerR%3B Transcription regulator MerR DNA binding~SMART: regulatory protein MerR~SPTR: Transcriptional regulator%2C MerR family%3B~PFAM: MerR%2C DNA binding%3B MerR family regulatory protein%3B TipAS antibiotic-recognition domain gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1699 Toce_1700 Toce_1700 Toce_1700 1690884 1692116 - glycoside hydrolase family 4 COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase family 4 of glycosyl hydrolase~InterPro IPR001088~KEGG: amt:Amet_4185 glycoside hydrolase family protein~PFAM: glycoside hydrolase family 4~SPTR: Glycoside hydrolase%2C family 4%3B~PFAM: Family 4 glycosyl hydrolase%3B Family 4 glycosyl hydrolase C-terminal domain gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1700 Toce_1701 Toce_1701 Toce_1701 1692221 1693147 - transketolase subunit B COGs: COG3958 Transketolase C-terminal subunit~InterPro IPR005475:IPR005476~KEGG: tex:Teth514_0969 transketolase%2C central region~PFAM: Transketolase central region%3B Transketolase domain protein~SPTR: Transketolase%2C central region%3B~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1701 Toce_1702 Toce_1702 Toce_1702 1693188 1694015 - transketolase subunit A COGs: COG3959 Transketolase N-terminal subunit~InterPro IPR005474~KEGG: dau:Daud_2078 transketolase domain-containing protein~PFAM: Transketolase domain protein~SPTR: Transketolase domain protein%3B~PFAM: Transketolase%2C thiamine diphosphate binding domain gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1702 Toce_1703 Toce_1703 Toce_1703 1694052 1694903 - Protein of unknown function DUF2179 COGs: COG1284 conserved hypothetical protein~InterPro IPR003740:IPR019264~KEGG: hor:Hore_16380 hypothetical protein~PFAM: Protein of unknown function DUF2179%3B protein of unknown function DUF161~SPTR: Uncharacterized conserved protein%3B~PFAM: Uncharacterized BCR%2C YitT family COG1284%3B Uncharacterized protein conserved in bacteria (DUF2179) gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1703 Toce_1704 Toce_1704 Toce_1704 1694909 1695649 - glycosyl transferase%2C WecB/TagA/CpsF family COGs: COG1922 Teichoic acid biosynthesis protein~InterPro IPR004629~KEGG: csc:Csac_1349 WecB/TagA/CpsF family glycosyl transferase~PFAM: glycosyl transferase WecB/TagA/CpsF~PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase~SPTR: Glycosyl transferase%2C WecB/TagA/CpsF family%3B~TIGRFAM: glycosyl transferase%2C WecB/TagA/CpsF family~PFAM: Glycosyl transferase WecB/TagA/CpsF family~TIGRFAM: bacterial polymer biosynthesis proteins%2C WecB/TagA/CpsF family gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1704 Toce_1705 Toce_1705 Toce_1705 1695693 1696784 - polysaccharide pyruvyl transferase CsaB COGs: COG2327 conserved hypothetical protein~InterPro IPR019896~KEGG: drm:Dred_3108 polysaccharide pyruvyl transferase~SPTR: Polysaccharide pyruvyl transferase%3B~TIGRFAM: polysaccharide pyruvyl transferase CsaB~PFAM: Polysaccharide pyruvyl transferase~TIGRFAM: polysaccharide pyruvyl transferase CsaB gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1705 Toce_1706 Toce_1706 Toce_1706 1696777 1698711 - conserved hypothetical protein KEGG: drm:Dred_3109 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1706 Toce_1707 Toce_1707 Toce_1707 1698773 1699225 - conserved hypothetical protein KEGG: pth:PTH_2777 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1707 Toce_1708 Toce_1708 Toce_1708 1699354 1700452 - bacterial peptide chain release factor 2 (bRF-2) KEGG: bpm:BURPS1710b_3602 hypothetical protein~SPTR: Peptide chain release factor 2%3B~manually curated~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 2 gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1708 Toce_1709 Toce_1709 Toce_1709 1700523 1703024 - protein translocase subunit secA COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase)~InterProIPR000185:IPR011115:IPR011130:IPR001650:IPR 011116:IPR004027:IPR014018:IPR020937~KEGG: ate:Athe_2104 preprotein translocase%2C SecA subunit~PFAM: SecA DEAD domain protein%3B SecA preprotein cross-linking region%3B helicase domain protein%3B SecA Wing and Scaffold%3B SEC-C motif domain protein~SPTR: Protein translocase subunit secA%3B~TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SecA DEAD-like domain%3B SecA preprotein cross-linking domain%3B SEC-C motif%3B SecA Wing and Scaffold domain~TIGRFAM: preprotein translocase%2C SecA subunit gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1709 Toce_1710 Toce_1710 Toce_1710 1703089 1703661 - conserved hypothetical protein KEGG: tte:TTE0519 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1710 Toce_1711 Toce_1711 Toce_1711 1703654 1704913 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR006674:IPR003607~KEGG: nth:Nther_2059 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Metal dependent phosphohydrolase%3B~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1711 Toce_1712 Toce_1712 Toce_1712 1705174 1705839 - conserved hypothetical protein KEGG: chy:CHY_0159 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1712 Toce_1713 Toce_1713 Toce_1713 1706084 1706323 + FeoA family protein InterPro IPR007167~KEGG: dae:Dtox_3837 FeoA family protein~PFAM: FeoA family protein~SPTR: Putative uncharacterized protein%3B~PFAM: FeoA domain gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1713 Toce_1714 Toce_1714 Toce_1714 1706343 1708461 + pseudogene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1714 Toce_1715 Toce_1715 Toce_1715 1708600 1710075 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1715 Toce_1716 Toce_1716 Toce_1716 1710145 1711416 - 2-hydroxyglutaryl-CoA dehydratase D-component COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB~InterPro IPR010327~KEGG: cbf:CLI_3383 putative R-2-hydroxyglutaryl-CoA dehydratase subunit~PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component~SPTR: Putative uncharacterized protein%3B~PFAM: 2-hydroxyglutaryl-CoA dehydratase%2C D-component gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1716 Toce_1717 Toce_1717 Toce_1717 1711752 1712279 - proton-coupled thiamine transporter YuaJ COGs: COG3859 membrane protein~InterPro IPR012651~KEGG: chy:CHY_0230 proton-coupled thiamine transporter YuaJ~PFAM: thiamine transporter YuaJ~SPTR: Probable proton-coupled thiamine transporter YuaJ%3B~TIGRFAM: proton-coupled thiamine transporter YuaJ~PFAM: Thiamine transporter protein (Thia_YuaJ)~TIGRFAM: probable proton-coupled thiamine transporter YuaJ gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1717 Toce_1718 Toce_1718 Toce_1718 1712711 1713046 + hypothetical protein KEGG: tca:662804 similar to vacuolar ATP synthase subunit G~SPTR: CNPV222 N1R/p28-like protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1718 Toce_1719 Toce_1719 Toce_1719 1713049 1714092 + H+transporting two-sector ATPase C (AC39) subunit COGs: COG1527 H+-ATPase subunit C~InterPro IPR002843~KEGG: ctc:CTC02332 V-type sodium ATP synthase subunit C~PFAM: H+transporting two-sector ATPase C (AC39) subunit~SPTR: V-type sodium ATP synthase subunit C%3B~PFAM: ATP synthase (C/AC39) subunit gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1719 Toce_1720 Toce_1720 Toce_1720 1714110 1716143 + V-type ATPase 116 kDa subunit COGs: COG1269 H+-ATPase subunit I~InterPro IPR002490~KEGG: ctc:CTC02331 V-type sodium ATP synthase subunit I~PFAM: V-type ATPase 116 kDa subunit~SPTR: V-type sodium ATP synthase subunit I%3B~PFAM: V-type ATPase 116kDa subunit family gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1720 Toce_1721 Toce_1721 Toce_1721 1716163 1716567 + H+transporting two-sector ATPase C subunit InterPro IPR002379:IPR000454:IPR000245~KEGG: ctc:CTC02330 putative ATPase related protein~PFAM: H+transporting two-sector ATPase C subunit~SPTR: Putative ATPase related protein%3B~PFAM: ATP synthase subunit C gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1721 Toce_1722 Toce_1722 Toce_1722 1716578 1716886 + Vacuolar H+transporting two-sector ATPase F subunit InterPro IPR008218~KEGG: cpy:Cphy_3444 vacuolar H+transporting two-sector ATPase F subunit~PFAM: Vacuolar H+transporting two-sector ATPase F subunit~SPTR: Putative uncharacterized protein%3B~PFAM: ATP synthase (F/14-kDa) subunit gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1722 Toce_1723 Toce_1723 Toce_1723 1716896 1717525 + H+transporting two-sector ATPase E subunit InterPro IPR002842~KEGG: hor:Hore_19410 V-type ATP synthase subunit E~PFAM: H+transporting two-sector ATPase E subunit~SPTR: V-type proton ATPase subunit E%3B~PFAM: ATP synthase (E/31 kDa) subunit gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1723 Toce_1724 Toce_1724 Toce_1724 1717529 1719292 + H+transporting two-sector ATPase alpha/beta subunit central region COGs: COG1155 H+-ATPase subunit A~InterPro IPR004100:IPR000194:IPR000793:IPR020003~KEGG: ctc:CTC02328 V-type ATP synthase subunit A~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SPTR: V-type ATP synthase alpha chain 2%3B~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain%3B ATP synthase alpha/beta chain%2C C terminal domain gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1724 Toce_1725 Toce_1725 Toce_1725 1719282 1720655 + H+transporting two-sector ATPase alpha/beta subunit central region COGs: COG1156 H+-ATPase subunit B~InterPro IPR004100:IPR000194:IPR000793:IPR020003~KEGG: ctc:CTC02327 V-type ATP synthase subunit B~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SPTR: V-type ATP synthase beta chain 2%3B~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1725 Toce_1726 Toce_1726 Toce_1726 1720660 1721286 + V-type ATPase%2C D subunit COGs: COG1394 H+-ATPase subunit D~InterPro IPR002699~KEGG: ctc:CTC02326 V-type sodium ATP synthase subunit D~PFAM: H+transporting two-sector ATPase D subunit~SPTR: V-type sodium ATP synthase subunit D%3B~TIGRFAM: V-type ATPase%2C D subunit~PFAM: ATP synthase subunit D~TIGRFAM: H(+)-transporting ATP synthase%2C vacuolar type%2C subunit D gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1726 Toce_1727 Toce_1727 Toce_1727 1721307 1723457 - heavy metal translocating P-type ATPase COGs: COG2217 Cation transport ATPase~Contains selenocysteine~InterProIPR006404:IPR006416:IPR001757:IPR006121:IPR 008250:IPR005834:IPR001366:IPR018303~KEGG: gsu:GSU2147 cadmium-translocating P-type ATPase~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase~SPTR: Heavy metal translocating P-type ATPase%3B~TIGRFAM: heavy metal translocating P-type ATPase%3B cadmium-translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~manually curated~PFAM: E1-E2 ATPase%3B Heavy-metal-associated domain%3B haloacid dehalogenase-like hydrolase~TIGRFAM: copper-(or silver)-translocating P-type ATPase%3B heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC%3B heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1727 Toce_1728 Toce_1728 Toce_1728 1723680 1724603 + UbiA prenyltransferase COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase~InterPro IPR000537:IPR005479~KEGG: tte:TTE2481 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~PFAM: UbiA prenyltransferase~SPTR: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase%3B~PFAM: UbiA prenyltransferase family~TIGRFAM: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1728 Toce_1729 Toce_1729 Toce_1729 1724660 1725532 + FMN-binding domain protein COGs: COG4939 Major membrane immunogen membrane-anchored lipoprotein~InterPro IPR007329~KEGG: lsg:lse_2542 lipoprotein%2C putative~PFAM: FMN-binding domain protein~SPTR: Lmo2637 protein%3B~PFAM: FMN-binding domain gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1729 Toce_1730 Toce_1730 Toce_1730 1725627 1726598 + Polyprenyl synthetase COGs: COG0142 Geranylgeranyl pyrophosphate synthase~InterPro IPR000092~KEGG: hmo:HM1_1960 heptaprenyl diphosphate synthase component II%2C putative~PFAM: Polyprenyl synthetase~SPTR: Heptaprenyl diphosphate synthase component ii%2C putative%3B~PFAM: Polyprenyl synthetase~TIGRFAM: heptaprenyl diphosphate synthase component II gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1730 Toce_1731 Toce_1731 Toce_1731 1726566 1728320 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase COGs: COG1252 NADH dehydrogenase FAD-containing subunit~InterPro IPR013027:IPR011637~KEGG: hor:Hore_14860 NADH dehydrogenase%2C FAD-containing subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B DoxX family protein~SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B DoxX gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1731 Toce_1732 Toce_1732 Toce_1732 1728642 1730705 - Amylo-alpha-16-glucosidase COGs: COG3408 Glycogen debranching protein~InterPro IPR010401~KEGG: gyc:GYMC61_1726 amylo-alpha-16-glucosidase~PFAM: Amylo-alpha-16-glucosidase~SPTR: Amylo-alpha-16-glucosidase%3B~PFAM: Amylo-alpha-1%2C6-glucosidase gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1732 Toce_1733 Toce_1733 Toce_1733 1730734 1731765 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761~KEGG: tit:Thit_0753 transcriptional regulator%2C LacI family~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: Transcriptional regulator%2C LacI family%3B~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1733 Toce_1734 Toce_1734 Toce_1734 1731971 1733983 + conserved hypothetical protein COGs: COG1331 Highly conserved protein containing a thioredoxin domain~KEGG: drm:Dred_2853 hypothetical protein~SPTR: dTMP kinase%3B~PFAM: Protein of unknown function%2C DUF255 gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1734 Toce_1735 Toce_1735 Toce_1735 1733988 1735421 - protein of unknown function UPF0027 COGs: COG1690 conserved hypothetical protein~InterPro IPR001233~KEGG: tte:TTE0709 hypothetical protein~PFAM: protein of unknown function UPF0027~SPTR: Putative uncharacterized protein RtcB%3B~PFAM: Uncharacterized protein family UPF0027 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1735 Toce_1736 Toce_1736 Toce_1736 1735588 1736613 + Radical SAM domain protein COGs: COG1533 DNA repair photolyase~InterPro IPR007197~KEGG: drm:Dred_0691 spore photoproduct lyase~PFAM: Radical SAM domain protein~SPTR: Radical SAM domain protein%3B~TIGRFAM: spore photoproduct lyase gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1736 Toce_1737 Toce_1737 Toce_1737 1736626 1737432 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase COGs: COG0388 amidohydrolase~InterPro IPR003010:IPR001110~KEGG: gym:GYMC10_2272 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase%3B~PFAM: Carbon-nitrogen hydrolase gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1737 Toce_1738 Toce_1738 Toce_1738 1737469 1738260 - protein of unknown function DUF990 COGs: COG3694 ABC-type uncharacterized transport system permease component~InterPro IPR010390~KEGG: sth:STH1199 hypothetical protein~PFAM: protein of unknown function DUF990~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF990) gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1738 Toce_1739 Toce_1739 Toce_1739 1738244 1739044 - protein of unknown function DUF990 COGs: COG4587 ABC-type uncharacterized transport system permease component~InterPro IPR010390~KEGG: pjd:Pjdr2_3967 protein of unknown function DUF990~PFAM: protein of unknown function DUF990~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF990) gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1739 Toce_1740 Toce_1740 Toce_1740 1739025 1740023 - ABC transporter related protein COGs: COG4586 ABC-type uncharacterized transport system ATPase component~InterPro IPR003439:IPR003593~KEGG: sth:STH1197 ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter ATP-binding protein%3B~PFAM: ABC transporter gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1740 Toce_1741 Toce_1741 Toce_1741 1740161 1741831 - alpha amylase catalytic region COGs: COG0366 Glycosidase~InterPro IPR006047:IPR006589~KEGG: ate:Athe_0165 alpha amylase catalytic region~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~SPTR: Alpha amylase catalytic region%3B~PFAM: Alpha amylase%2C catalytic domain gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1741 Toce_1742 Toce_1742 Toce_1742 1741932 1743059 - two component transcriptional regulator%2C AraC family COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain~InterProIPR001789:IPR000005:IPR020449:IPR018060:IPR 018062~KEGG: tit:Thit_0428 two component transcriptional regulator%2C AraC family~PFAM: response regulator receiver%3B helix-turn-helix- domain containing protein AraC type~SMART: response regulator receiver%3B Helix-turn-helix%2C AraC domain~SPTR: Two component transcriptional regulator%2C AraC family%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory helix-turn-helix proteins%2C AraC family gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1742 Toce_1743 Toce_1743 Toce_1743 1743059 1744752 - pseudogene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1743 Toce_1744 Toce_1744 Toce_1744 1744924 1746219 + carbohydrate ABC transporter substrate-binding protein%2C CUT1 family COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: tit:Thit_0426 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: Extracellular solute-binding protein family 1%3B~PFAM: Bacterial extracellular solute-binding protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1744 Toce_1745 Toce_1745 Toce_1745 1746219 1747163 + carbohydrate ABC transporter membrane protein 1%2C CUT1 family COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: tit:Thit_0425 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport system inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1745 Toce_1746 Toce_1746 Toce_1746 1747168 1748001 + carbohydrate ABC transporter membrane protein 2%2C CUT1 family COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: tit:Thit_0424 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1746 Toce_1747 Toce_1747 Toce_1747 1748032 1748457 - RNA polymerase sigma factor%2C sigma-70 family InterPro IPR014284:IPR007630~KEGG: pth:PTH_1893 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24-like protein~PFAM: sigma-70 region 4 domain protein~SPTR: DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog%3B~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1747 Toce_1748 Toce_1748 Toce_1748 1748535 1748801 - hypothetical protein KEGG: tte:TTE0413 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1748 Toce_1749 Toce_1749 Toce_1749 1749229 1750689 - Peptidoglycan-binding domain 1 protein InterPro IPR002477~KEGG: aoe:Clos_2845 peptidoglycan binding domain-containing protein~PFAM: Peptidoglycan-binding domain 1 protein~SPTR: Peptidoglycan-binding domain 1 protein%3B~PFAM: Putative peptidoglycan binding domain gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1749 Toce_1750 Toce_1750 Toce_1750 1750935 1751558 - Superoxide dismutase COGs: COG0605 Superoxide dismutase~InterPro IPR019832:IPR001189~KEGG: tit:Thit_0797 superoxide dismutase~PFAM: Manganese/iron superoxide dismutase-like~PRIAM: Superoxide dismutase~SPTR: Superoxide dismutase (Mn/Fe family)%2C C-terminal domain protein%3B~PFAM: Iron/manganese superoxide dismutases%2C alpha-hairpin domain%3B Iron/manganese superoxide dismutases%2C C-terminal domain gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1750 Toce_1751 Toce_1751 Toce_1751 1751781 1752164 - death-on-curing family protein COGs: COG3654 Prophage maintenance system killer protein~InterPro IPR006440:IPR003812~KEGG: dsy:DSY0631 hypothetical protein~PFAM: filamentation induced by cAMP protein Fic~SPTR: Death-on-curing family protein%3B~TIGRFAM: death-on-curing family protein~PFAM: Fic/DOC family~TIGRFAM: death-on-curing family protein gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1751 Toce_1752 Toce_1752 Toce_1752 1752164 1752334 - conserved hypothetical protein KEGG: dhd:Dhaf_0601 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2281) gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1752 Toce_1753 Toce_1753 Toce_1753 1752621 1753376 + 4Fe-4S ferredoxin iron-sulfur binding domain protein InterPro IPR017896~KEGG: nth:Nther_2292 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1753 Toce_1754 Toce_1754 Toce_1754 1753494 1754036 + conserved hypothetical protein KEGG: chy:CHY_2453 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1754 Toce_1755 Toce_1755 Toce_1755 1754147 1755400 - major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: ate:Athe_0910 major facilitator superfamily MFS_1~PFAM: major facilitator superfamily MFS_1~SPTR: Major facilitator superfamily MFS_1%3B~PFAM: Major Facilitator Superfamily gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1755 Toce_1756 Toce_1756 Toce_1756 1755530 1755979 - conserved hypothetical protein KEGG: kol:Kole_1817 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1756 Toce_1757 Toce_1757 Toce_1757 1756020 1758038 - DNA ligase%2C NAD-dependent COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)~InterProIPR001679:IPR013839:IPR004150:IPR004149:IPR 001357:IPR013840:IPR003583:IPR018239~KEGG: tte:TTE0605 NAD-dependent DNA ligase~PFAM: NAD-dependent DNA ligase adenylation%3B NAD-dependent DNA ligase OB-fold%3B zinc-finger NAD-dependent DNA ligase C4-type%3B BRCT domain protein~PRIAM: DNA ligase (NAD(+))~SMART: NAD-dependent DNA ligase %3B Helix-hairpin-helix DNA-binding class 1%3B BRCT domain protein~SPTR: DNA ligase%3B~TIGRFAM: DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase OB-fold domain%3B NAD-dependent DNA ligase adenylation domain%3B NAD-dependent DNA ligase C4 zinc finger domain%3B BRCA1 C Terminus (BRCT) domain~TIGRFAM: DNA ligase%2C NAD-dependent gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1757 Toce_1758 Toce_1758 Toce_1758 1758075 1760270 - ATP-dependent DNA helicase PcrA COGs: COG0210 Superfamily I DNA and RNA helicase~InterProIPR005751:IPR000212:IPR014016:IPR014017:IPR 005829~KEGG: cth:Cthe_2876 ATP-dependent DNA helicase PcrA~PFAM: UvrD/REP helicase~SPTR: ATP-dependent DNA helicase PcrA%3B~TIGRFAM: ATP-dependent DNA helicase PcrA~PFAM: UvrD/REP helicase~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type%3B ATP-dependent DNA helicase PcrA gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1758 Toce_1759 Toce_1759 Toce_1759 1760308 1760616 - TrpR like protein%2C YerC/YecD COGs: COG4496 conserved hypothetical protein~InterPro IPR013368:IPR000831~KEGG: dae:Dtox_0748 TrpR like protein%2C YerC/YecD~PFAM: Trp repressor~SPTR: TrpR like protein%2C YerC/YecD%3B~TIGRFAM: TrpR like protein%2C YerC/YecD~PFAM: Trp repressor protein~TIGRFAM: TrpR-related protein YerC/YecD%3B trp operon repressor%2C proteobacterial gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1759 Toce_1760 Toce_1760 Toce_1760 1760640 1762034 - dipeptidase COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase~InterPro IPR010964:IPR002933:IPR011650:IPR001261~KEGG: tpd:Teth39_0750 dipeptidase PepV~PFAM: peptidase M20%3B peptidase dimerisation domain protein~SPTR: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases%3B~TIGRFAM: dipeptidase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: dipeptidase%2C putative gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1760 Toce_1761 Toce_1761 Toce_1761 1762122 1762676 - phosphoesterase PA-phosphatase related protein InterPro IPR000326:IPR001011~KEGG: tit:Thit_2198 phosphoesterase PA-phosphatase related protein~PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~SPTR: Phosphoesterase PA-phosphatase related protein%3B~PFAM: PAP2 superfamily gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1761 Toce_1762 Toce_1762 Toce_1762 1762689 1763099 - UspA domain protein COGs: COG2205 Osmosensitive K+ channel histidine kinase~InterPro IPR006016~KEGG: tpd:Teth39_0454 osmosensitive K+ channel histidine kinase-like protein~PFAM: UspA domain protein~SPTR: UspA domain protein%3B~PFAM: Universal stress protein family gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1762 Toce_1763 Toce_1763 Toce_1763 1763264 1763719 + quorum-sensing autoinducer 2 (AI-2)%2C LuxS COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis~InterPro IPR003815~KEGG: efa:EF1182 S-ribosylhomocysteinase~PFAM: LuxS protein~PRIAM: S-ribosylhomocysteine lyase~SPTR: Quorum-sensing autoinducer 2 (AI-2)%2C LuxS%3B~PFAM: S-Ribosylhomocysteinase (LuxS) gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1763 Toce_1764 Toce_1764 Toce_1764 1763738 1766128 - ATP-dependent proteinase COGs: COG0466 ATP-dependent Lon protease~InterProIPR004815:IPR003111:IPR003959:IPR001984:IPR 003593:IPR008268~KEGG: chy:CHY_0330 ATP-dependent protease La~PFAM: peptidase S16 lon domain protein%3B AAA ATPase central domain protein~PRIAM: Endopeptidase La~SMART: peptidase S16 lon domain protein%3B AAA ATPase~SPTR: ATP-dependent protease La%3B~TIGRFAM: ATP-dependent protease La~PFAM: ATP-dependent protease La (LON) domain%3B ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease La gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1764 Toce_1765 Toce_1765 Toce_1765 1766206 1767873 - ATP-dependent protease LonB COGs: COG1067 ATP-dependent protease~InterProIPR014251:IPR003959:IPR001984:IPR003593:IPR 008268~KEGG: drm:Dred_2560 ATPase central domain-containing protein~PFAM: AAA ATPase central domain protein~PRIAM: Endopeptidase La~SMART: AAA ATPase~SPTR: Endopeptidase La%3B~TIGRFAM: ATP-dependent protease LonB~PFAM: ATPase family associated with various cellular activities (AAA)%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: ATP-dependent protease LonB%3B lon-related putative ATP-dependent protease gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1765 Toce_1766 Toce_1766 Toce_1766 1767983 1769248 - ATP-dependent Clp protease ATP-binding subunit ClpX COGs: COG1219 ATP-dependent protease Clp ATPase subunit~InterProIPR004487:IPR010603:IPR013093:IPR019489:IPR 003593~KEGG: hmo:HM1_0472 ATP-dependent clp protease%2C ATP-binding subunit ClpX~PFAM: ATPase AAA-2 domain protein%3B zinc finger C4 domain protein%3B Clp ATPase-like~SMART: AAA ATPase~SPTR: ATP-dependent Clp protease%2C ATP-binding subunit ClpX%3B~TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B ClpX C4-type zinc finger~TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1766 Toce_1767 Toce_1767 Toce_1767 1769253 1769855 - ATP-dependent Clp protease proteolytic subunit ClpP COGs: COG0740 Protease subunit of ATP-dependent Clp protease~InterPro IPR001907:IPR018215~KEGG: afw:Anae109_3421 ATP-dependent Clp protease%2C proteolytic subunit ClpP~PFAM: peptidase S14 ClpP~PRIAM: Endopeptidase Clp~SPTR: ATP-dependent Clp protease proteolytic subunit%3B~TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP~PFAM: Clp protease~TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1767 Toce_1768 Toce_1768 Toce_1768 1769877 1771217 - trigger factor COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)~InterPro IPR005215:IPR008881:IPR001179:IPR008880~KEGG: cth:Cthe_2739 trigger factor~PFAM: trigger factor domain%3B peptidylprolyl isomerase FKBP-type%3B trigger factor domain protein~SPTR: Trigger factor%3B~TIGRFAM: trigger factor~PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase%3B Bacterial trigger factor protein (TF)%3B Bacterial trigger factor protein (TF) C-terminus~TIGRFAM: trigger factor gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1768 Toce_1769 Toce_1769 Toce_1769 1771990 1772658 - beta-phosphoglucomutase COGs: COG0637 phosphatase/phosphohexomutase~InterProIPR010972:IPR010976:IPR006402:IPR005834:IPR 005833~KEGG: tte:TTE0802 phosphatase/phosphohexomutase~PFAM: Haloacid dehalogenase domain protein hydrolase~SPTR: Predicted phosphatase/phosphohexomutase%3B~TIGRFAM: beta-phosphoglucomutase%3B beta-phosphoglucomutase family hydrolase%3B HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: haloacid dehalogenase-like hydrolase~TIGRFAM: beta-phosphoglucomutase%3B haloacid dehalogenase superfamily%2C subfamily IA%2C variant 3 with third motif having DD or ED%3B beta-phosphoglucomutase family hydrolase gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1769 Toce_1770 Toce_1770 Toce_1770 1772645 1775002 - glycoside hydrolase family 65 central catalytic COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase)~InterPro IPR005196:IPR005195:IPR005194:IPR017045~KEGG: tpd:Teth39_1512 kojibiose phosphorylase~PFAM: glycoside hydrolase family 65 central catalytic%3B glycoside hydrolase family 65 domain protein~SPTR: Kojibiose phosphorylase%3B~PFAM: Glycosyl hydrolase family 65%2C C-terminal domain%3B Glycosyl hydrolase family 65 central catalytic domain%3B Glycosyl hydrolase family 65%2C N-terminal domain gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1770 Toce_1771 Toce_1771 Toce_1771 1775104 1776354 - carbohydrate ABC transporter substrate-binding protein%2C CUT1 family COGs: COG1653 ABC-type sugar transport system periplasmic component~InterPro IPR006059~KEGG: tit:Thit_0763 extracellular solute-binding protein family 1~PFAM: extracellular solute-binding protein family 1~SPTR: Extracellular solute-binding protein family 1%3B~PFAM: Bacterial extracellular solute-binding protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1771 Toce_1772 Toce_1772 Toce_1772 1776394 1777224 - carbohydrate ABC transporter membrane protein 2%2C CUT1 family COGs: COG0395 ABC-type sugar transport system permease component~InterPro IPR000515~KEGG: tpd:Teth39_1514 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1772 Toce_1773 Toce_1773 Toce_1773 1777224 1778075 - carbohydrate ABC transporter membrane protein 1%2C CUT1 family COGs: COG1175 ABC-type sugar transport systems permease components~InterPro IPR000515~KEGG: tpd:Teth39_1515 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1773 Toce_1774 Toce_1774 Toce_1774 1778130 1779137 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761~KEGG: tte:TTE0803 transcriptional regulator~PFAM: periplasmic binding protein/LacI transcriptional regulator%3B regulatory protein LacI~SMART: regulatory protein LacI~SPTR: Transcriptional regulator%3B~PFAM: Bacterial regulatory proteins%2C lacI family%3B family~TIGRFAM: catabolite control protein A gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1774 Toce_1775 Toce_1775 Toce_1775 1779219 1780244 - hypothetical protein KEGG: cbe:Cbei_3682 hypothetical protein~SPTR: Predicted protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1775 Toce_1776 Toce_1776 Toce_1776 1780296 1780997 - cell wall-associated hydrolase-like protein KEGG: cbe:Cbei_3683 cell wall-associated hydrolase-like protein~SPTR: Cell wall-associated hydrolase-like protein%3B~PFAM: Orthopoxvirus protein of unknown function (DUF830) gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1776 Toce_1777 Toce_1777 Toce_1777 1781221 1782942 - peptidase S8 and S53 subtilisin kexin sedolisin COGs: COG1404 Subtilisin-like serine protease~InterPro IPR010259:IPR000209:IPR007280:IPR018247~KEGG: tex:Teth514_2192 peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin~PFAM: peptidase S8 and S53 subtilisin kexin sedolisin%3B proteinase inhibitor I9 subtilisin propeptide%3B peptidase domain protein~SPTR: Peptidase S8 and S53%2C subtilisin%2C kexin%2C sedolisin%3B~PFAM: Bacterial pre-peptidase C-terminal domain%3B Peptidase inhibitor I9%3B Subtilase family gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1777 Toce_1778 Toce_1778 Toce_1778 1783291 1783962 + hypothetical protein KEGG: ath:AT4G34830 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1778 Toce_1779 Toce_1779 Toce_1779 1784034 1785122 - putative sigma54 specific transcriptional regulator COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterPro IPR002078:IPR013668:IPR003593~KEGG: aoe:Clos_0069 putative sigma54 specific transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B Ribonuclease R winged-helix domain protein~SMART: AAA ATPase~SPTR: Carbamoyl-phosphate synthase%2C large subunit%3B~PFAM: Ribonuclease R winged-helix domain%3B Sigma-54 interaction domain gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1779 Toce_1780 Toce_1780 Toce_1780 1785411 1786361 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase~InterPro IPR006139:IPR006140~KEGG: tit:Thit_0541 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1780 Toce_1781 Toce_1781 Toce_1781 1786387 1786860 - phosphodiesterase%2C MJ0936 family COGs: COG0622 phosphoesterase~InterPro IPR000979:IPR004843~KEGG: dae:Dtox_3620 phosphodiesterase%2C MJ0936 family~PFAM: metallophosphoesterase~SPTR: Phosphodiesterase%2C MJ0936 family%3B~TIGRFAM: phosphodiesterase%2C MJ0936 family~PFAM: Calcineurin-like phosphoesterase~TIGRFAM: phosphoesterase%2C MJ0936 family gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1781 Toce_1782 Toce_1782 Toce_1782 1786877 1787473 - non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family COGs: COG0127 Xanthosine triphosphate pyrophosphatase~InterPro IPR002637:IPR020922~KEGG: tye:THEYE_A1837 non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family~PFAM: Ham1 family protein~SPTR: Nucleoside-triphosphatase%3B~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1782 Toce_1783 Toce_1783 Toce_1783 1787448 1788206 - RNAse PH COGs: COG0689 RNase PH~InterPro IPR002381:IPR001247:IPR015847:IPR018336~KEGG: tte:TTE0618 RNase PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2~PRIAM: tRNA nucleotidyltransferase~SPTR: Ribonuclease PH%3B~TIGRFAM: ribonuclease PH~PFAM: 3' exoribonuclease family%2C domain 1%3B 3' exoribonuclease family%2C domain 2~TIGRFAM: ribonuclease PH gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1783 Toce_1784 Toce_1784 Toce_1784 1788233 1789234 - Lipoprotein LpqB%2C GerMN domain protein COGs: COG5401 Spore germination protein~InterPro IPR019606~KEGG: aoe:Clos_0556 hypothetical protein~PFAM: Lipoprotein LpqB%2C GerMN domain~SPTR: Putative uncharacterized protein%3B~PFAM: Sporulation and spore germination gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1784 Toce_1785 Toce_1785 Toce_1785 1789306 1789815 - Protein of unknown function DUF2179 COGs: COG4843 conserved hypothetical protein~InterPro IPR019264~KEGG: aoe:Clos_0555 hypothetical protein~PFAM: Protein of unknown function DUF2179~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein conserved in bacteria (DUF2179) gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1785 Toce_1786 Toce_1786 Toce_1786 1789881 1791485 - cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR012854:IPR002508~KEGG: tit:Thit_0595 N-acetylmuramoyl-L-alanine amidase~PFAM: cell wall hydrolase/autolysin%3B copper amine oxidase domain protein~SMART: cell wall hydrolase/autolysin~SPTR: N-acetylmuramoyl-L-alanine amidase%3B~PFAM: Copper amine oxidase N-terminal domain%3B N-acetylmuramoyl-L-alanine amidase%3B Localisation of periplasmic protein complexes~TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1786 Toce_1787 Toce_1787 Toce_1787 1791691 1792362 - CoA-binding domain protein COGs: COG2344 AT-rich DNA-binding protein~InterPro IPR009718:IPR003781~KEGG: aoe:Clos_2464 redox-sensing transcriptional repressor REX~PFAM: CoA-binding domain protein%3B Rex DNA-binding domain protein~SPTR: CoA-binding domain protein%3B~PFAM: CoA binding domain%3B Putative DNA-binding protein N-terminus gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1787 Toce_1788 Toce_1788 Toce_1788 1792535 1794223 - Na+/H+ antiporter NhaC COGs: COG1757 Na+/H+ antiporter~InterPro IPR018461~KEGG: drm:Dred_1645 Na+/H+ antiporter NhaC~PFAM: Na+/H+ antiporter NhaC-like~SPTR: Na+/H+ antiporter NhaC%3B~PFAM: Na+/H+ antiporter family gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1788 Toce_1789 Toce_1789 Toce_1789 1794858 1795979 - homoserine O-acetyltransferase COGs: COG2021 Homoserine acetyltransferase~InterPro IPR006296:IPR000073:IPR008220~KEGG: tex:Teth514_0977 homoserine O-acetyltransferase~PFAM: alpha/beta hydrolase fold~PRIAM: Homoserine O-acetyltransferase~SPTR: Homoserine O-acetyltransferase%3B~TIGRFAM: homoserine O-acetyltransferase~PFAM: alpha/beta hydrolase fold~TIGRFAM: homoserine O-acetyltransferase gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1789 Toce_1790 Toce_1790 Toce_1790 1796001 1797275 - O-acetylhomoserine sulfhydrolase COGs: COG2873 O-acetylhomoserine sulfhydrylase~InterPro IPR006235:IPR000277~KEGG: tpd:Teth39_0501 O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein~PRIAM: Cysteine synthase~SPTR: O-acetylhomoserine/O-acetylserine sulfhydrylase%3B~TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase~PFAM: Cys/Met metabolism PLP-dependent enzyme~TIGRFAM: OAH/OAS sulfhydrylase gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1790 Toce_1791 Toce_1791 Toce_1791 1797624 1798216 + pseudogene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1791 Toce_1792 Toce_1792 Toce_1792 1798280 1798483 + pseudogene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1792 Toce_1793 Toce_1793 Toce_1793 1798519 1799073 + Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR003251:IPR004039:IPR009040~KEGG: cpy:Cphy_3121 rubrerythrin~PFAM: Rubrerythrin%3B Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1793 Toce_1794 Toce_1794 Toce_1794 1799109 1799651 - signal peptidase I COGs: COG0681 Signal peptidase I~InterPro IPR000223:IPR019759:IPR019757:IPR019758~KEGG: tpd:Teth39_0028 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region~PRIAM: Signal peptidase I~SPTR: Signal peptidase I%3B~TIGRFAM: signal peptidase I~PFAM: Peptidase S24-like~TIGRFAM: signal peptidase I%2C bacterial type gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1794 Toce_1795 Toce_1795 Toce_1795 1799714 1800442 - cell wall hydrolase/autolysin COGs: COG0860 N-acetylmuramoyl-L-alanine amidase~InterPro IPR002508~KEGG: bmq:BMQ_0173 N-acetylmuramoyl-L-alanine amidase~PFAM: cell wall hydrolase/autolysin~SMART: cell wall hydrolase/autolysin~SPTR: Cell wall hydrolase/autolysin%3B~PFAM: N-acetylmuramoyl-L-alanine amidase~TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1795 Toce_1796 Toce_1796 Toce_1796 1800609 1802042 - drug resistance transporter%2C EmrB/QacA subfamily InterPro IPR004638:IPR011701:IPR001411~KEGG: adg:Adeg_0366 drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~SPTR: Drug resistance transporter%2C EmrB/QacA subfamily%3B~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: Major Facilitator Superfamily~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1796 Toce_1797 Toce_1797 Toce_1797 1802133 1803229 - pseudogene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1797 Toce_1798 Toce_1798 Toce_1798 1803280 1804362 - Mannose-1-phosphate guanylyltransferase COGs: COG0836 Mannose-1-phosphate guanylyltransferase~InterPro IPR005835:IPR001538~KEGG: csc:Csac_2018 mannose-1-phosphate guanylyltransferase (GDP)~PFAM: Nucleotidyl transferase%3B mannose-6-phosphate isomerase type II~PRIAM: Mannose-1-phosphate guanylyltransferase~SPTR: Mannose-1-phosphate guanylyltransferase (GDP)%3B~PFAM: Nucleotidyl transferase%3B Mannose-6-phosphate isomerase~TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1798 Toce_1799 Toce_1799 Toce_1799 1804494 1805549 - methylthioribose-1-phosphate isomerase COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family~InterPro IPR005251:IPR011559:IPR000649~KEGG: cbb:CLD_3299 methylthioribose-1-phosphate isomerase~PFAM: initiation factor 2B related~PRIAM: S-methyl-5-thioribose-1-phosphate isomerase~SPTR: Methylthioribose-1-phosphate isomerase%3B~TIGRFAM: translation initiation factor%2C aIF-2BI family%3B eIF-2B alpha/beta/delta-related uncharacterized protein~PFAM: Initiation factor 2 subunit family~TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins%3B S-methyl-5-thioribose-1-phosphate isomerase gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1799 Toce_1800 Toce_1800 Toce_1800 1805624 1806802 - sodium:dicarboxylate symporter COGs: COG1301 Na+/H+-dicarboxylate symporter~InterPro IPR001991~KEGG: drm:Dred_0908 sodium:dicarboxylate symporter~PFAM: sodium:dicarboxylate symporter~SPTR: Serine/threonine transporter%3B~PFAM: Sodium:dicarboxylate symporter family gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1800 Toce_1801 Toce_1801 Toce_1801 1806824 1807681 - L-serine ammonia-lyase COGs: COG1760 L-serine deaminase~InterPro IPR004642:IPR005130~KEGG: cno:NT01CX_1254 L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit~PFAM: serine dehydratase alpha chain~PRIAM: L-serine ammonia-lyase~SPTR: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit%3B~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit~PFAM: Serine dehydratase alpha chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1801 Toce_1802 Toce_1802 Toce_1802 1807694 1808353 - L-serine ammonia-lyase COGs: COG1760 L-serine deaminase~InterPro IPR004643:IPR005131:IPR002912~KEGG: tit:Thit_0968 L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit~PFAM: serine dehydratase beta chain%3B amino acid-binding ACT domain protein~PRIAM: L-serine ammonia-lyase~SPTR: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit%3B~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit~manually curated~PFAM: ACT domain%3B Serine dehydratase beta chain~TIGRFAM: L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1802 Toce_1803 Toce_1803 Toce_1803 1808404 1809612 - L-threonine ammonia-lyase COGs: COG1171 Threonine dehydratase~InterPro IPR005789:IPR001926:IPR002912:IPR000634~KEGG: chy:CHY_2459 threonine dehydratase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit%3B amino acid-binding ACT domain protein~SPTR: Threonine dehydratase%3B~TIGRFAM: threonine dehydratase~PFAM: ACT domain%3B Pyridoxal-phosphate dependent enzyme~TIGRFAM: threonine ammonia-lyase%2C biosynthetic%2C long form%3B threonine dehydratase%2C medium form gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1803 Toce_1804 Toce_1804 Toce_1804 1809650 1810027 - endoribonuclease L-PSP COGs: COG0251 Putative translation initiation inhibitor yjgF family~InterPro IPR006056:IPR006175~KEGG: tit:Thit_1447 endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~SPTR: Putative endoribonuclease L-PSP%3B~TIGRFAM: endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP~TIGRFAM: endoribonuclease L-PSP%2C putative gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1804 Toce_1805 Toce_1805 Toce_1805 1810067 1810750 - YheO domain protein COGs: COG2964 conserved hypothetical protein~InterPro IPR013559~KEGG: chy:CHY_2461 PAC domain-containing protein~PFAM: YheO domain protein~SPTR: Putative PAC domain protein%3B~PFAM: YheO-like PAS domain gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1805 Toce_1806 Toce_1806 Toce_1806 1810968 1812077 + carbohydrate ABC transporter ATP-binding protein%2C CUT1 family COGs: COG3839 ABC-type sugar transport systems ATPase components~InterPro IPR003439:IPR005116:IPR003593:IPR017871~KEGG: tte:TTE1979 ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems%2C ATPase component~PFAM: ABC transporter related%3B TOBE domain protein~SMART: AAA ATPase~SPTR: ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems%2C ATPase component%3B~PFAM: ABC transporter%3B TOBE domain gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1806 Toce_1807 Toce_1807 Toce_1807 1812161 1813060 + transcriptional regulator%2C CdaR COGs: COG3835 Sugar diacid utilization regulator~InterPro IPR002197~KEGG: ate:Athe_1802 transcriptional regulator%2C CdaR~PFAM: helix-turn-helix Fis-type~SPTR: Transcriptional regulator%2C CdaR gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1807 Toce_1808 Toce_1808 Toce_1808 1813066 1814631 - integral membrane protein MviN COGs: COG0728 membrane protein putative virulence factor~InterPro IPR004268~KEGG: tte:TTE0176 uncharacterized membrane protein%2C putative virulence factor~PFAM: virulence factor MVIN family protein~SPTR: Uncharacterized membrane protein%2C putative virulence factor%3B~TIGRFAM: integral membrane protein MviN~PFAM: MviN-like protein~TIGRFAM: integral membrane protein MviN gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1808 Toce_1809 Toce_1809 Toce_1809 1814638 1815594 - glucokinase%2C ROK family COGs: COG1940 Transcriptional regulator/sugar kinase~InterPro IPR004654:IPR000600~KEGG: tte:TTE0090 transcriptional regulator~PFAM: ROK family protein~SPTR: ROK family protein (Putative glucokinase)%3B~TIGRFAM: glucokinase%2C ROK family~PFAM: ROK family~TIGRFAM: ROK family protein (putative glucokinase) gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1809 Toce_1810 Toce_1810 Toce_1810 1815627 1816556 - fructose-bisphosphate aldolase COGs: COG0191 Fructose/tagatose bisphosphate aldolase~InterPro IPR000771:IPR011289~KEGG: csc:Csac_1189 fructose-1%2C6-bisphosphate aldolase%2C class II~PFAM: ketose-bisphosphate aldolase class-II~PRIAM: Fructose-bisphosphate aldolase~SPTR: Fructose-bisphosphate aldolase%3B~TIGRFAM: fructose-1%2C6-bisphosphate aldolase%2C class II%3B ketose-bisphosphate aldolase~PFAM: Fructose-bisphosphate aldolase class-II~TIGRFAM: ketose-bisphosphate aldolases%3B fructose-1%2C6-bisphosphate aldolase%2C class II%2C various bacterial and amitochondriate protist gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1810 Toce_1811 Toce_1811 Toce_1811 1816682 1817935 + GTP-binding proten HflX COGs: COG2262 GTPase~InterPro IPR016496:IPR005225:IPR002917:IPR006073~KEGG: hor:Hore_11140 small GTP-binding protein~PFAM: GTP-binding protein HSR1-related~SPTR: Small GTP-binding protein%3B~TIGRFAM: GTP-binding proten HflX%3B small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: GTP-binding protein HflX%3B small GTP-binding protein domain gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1811 Toce_1812 Toce_1812 Toce_1812 1818271 1818444 + hypothetical protein KEGG: drm:Dred_0921 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1812 Toce_1813 Toce_1813 Toce_1813 1818824 1819981 + protein of unknown function DUF955 COGs: COG2856 Zn peptidase~InterPro IPR010359~KEGG: chy:CHY_0294 hypothetical protein~PFAM: protein of unknown function DUF955~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF955) gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1813 Toce_1814 Toce_1814 Toce_1814 1819978 1820478 + PilT domain-containing protein KEGG: chy:CHY_0293 PilT domain-containing protein~SPTR: PIN domain protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1814 Toce_1815 Toce_1815 Toce_1815 1820695 1821876 - major facilitator superfamily MFS_1 InterPro IPR011701~KEGG: gur:Gura_0249 major facilitator transporter~PFAM: major facilitator superfamily MFS_1~SPTR: Putative uncharacterized protein%3B~PFAM: Major Facilitator Superfamily gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1815 Toce_1816 Toce_1816 Toce_1816 1822060 1823010 - PP-loop domain protein COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~InterPro IPR011063:IPR012089~KEGG: ate:Athe_0195 PP-loop domain protein~PFAM: PP-loop domain protein~SPTR: PP-loop domain protein%3B~PFAM: PP-loop family~TIGRFAM: conserved hypothetical protein TIGR00269 gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1816 Toce_1817 Toce_1817 Toce_1817 1823026 1823223 - thiamineS protein InterPro IPR003749~KEGG: tit:Thit_0461 thiamineS protein~PFAM: thiamineS protein~SPTR: ThiamineS protein%3B~PFAM: ThiS family gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1817 Toce_1818 Toce_1818 Toce_1818 1823360 1823827 - SsrA-binding protein COGs: COG0691 tmRNA-binding protein~InterPro IPR000037:IPR020081~KEGG: tte:TTE0985 SsrA-binding protein~PFAM: SmpB protein~SPTR: SsrA-binding protein%3B~TIGRFAM: SsrA-binding protein~PFAM: SmpB protein~TIGRFAM: SsrA-binding protein gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1818 Toce_1819 Toce_1819 Toce_1819 1823838 1825955 - RNAse R COGs: COG0557 Exoribonuclease R~InterProIPR011805:IPR004476:IPR013223:IPR001900:IPR 003029:IPR011129~KEGG: ate:Athe_2108 ribonuclease R~PFAM: ribonuclease II%3B Ribonuclease B OB region domain%3B RNA binding S1 domain protein~SMART: Cold shock protein~SPTR: Ribonuclease R%3B~TIGRFAM: ribonuclease R%3B VacB and RNase II family 3'-5' exoribonuclease~PFAM: RNB domain%3B Ribonuclease B OB domain%3B S1 RNA binding domain~TIGRFAM: ribonuclease R%3B VacB and RNase II family 3'-5' exoribonucleases gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1819 Toce_1820 Toce_1820 Toce_1820 1825976 1826527 - metal dependent phosphohydrolase COGs: COG2316 hydrolase (HD superfamily)~InterPro IPR006675:IPR006674~KEGG: chy:CHY_0288 HDIG domain-containing protein~PFAM: metal-dependent phosphohydrolase HD sub domain~SPTR: HDIG domain protein%3B~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1820 Toce_1821 Toce_1821 Toce_1821 1826628 1827758 - major facilitator superfamily MFS_1 InterPro IPR011701:IPR005829~KEGG: tte:TTE1515 major facilitator superfamily permease~PFAM: major facilitator superfamily MFS_1~SPTR: Permeases of the major facilitator superfamily%3B~PFAM: Sugar (and other) transporter%3B Major Facilitator Superfamily gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1821 Toce_1822 Toce_1822 Toce_1822 1827923 1828123 + conserved hypothetical protein KEGG: ate:Athe_1756 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1822 Toce_1823 Toce_1823 Toce_1823 1828185 1828721 - Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR003251:IPR004039:IPR009040~KEGG: csc:Csac_2430 rubrerythrin~PFAM: Rubrerythrin%3B Rubredoxin-type Fe(Cys)4 protein~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1823 Toce_1824 Toce_1824 Toce_1824 1828852 1829820 - SPFH domain%2C Band 7 family protein COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs~InterPro IPR001107:IPR001972~KEGG: cpo:COPRO5265_0367 erythrocyte band 7 integral membrane protein~PFAM: band 7 protein~SMART: band 7 protein~SPTR: Erythrocyte band 7 integral membrane protein%3B~PFAM: SPFH domain / Band 7 family gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1824 Toce_1825 Toce_1825 Toce_1825 1830097 1830651 - hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain~InterPro IPR004647~KEGG: chy:CHY_0062 fumarate hydratase~PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region~SPTR: Hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit%3B~TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit~PFAM: Fumarase C-terminus~TIGRFAM: hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta region gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1825 Toce_1826 Toce_1826 Toce_1826 1830665 1831513 - fumarase alpha subunit COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain~InterPro IPR004646~KEGG: chy:CHY_0061 fumarate hydratase~PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region~PRIAM: Fumarate hydratase~SPTR: Fumarase alpha subunit%3B~TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit~PFAM: Fumarate hydratase (Fumerase)~TIGRFAM: hydro-lyases%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha region gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1826 Toce_1827 Toce_1827 Toce_1827 1831672 1832736 - malic protein NAD-binding protein COGs: COG0281 Malic enzyme~InterPro IPR012301:IPR012302:IPR015884~KEGG: tex:Teth514_0830 malate dehydrogenase~PFAM: malic protein NAD-binding%3B malic protein domain protein~SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))%3B~PFAM: Malic enzyme%2C NAD binding domain%3B Malic enzyme%2C N-terminal domain gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1827 Toce_1828 Toce_1828 Toce_1828 1832865 1833980 - glutaconyl-CoA decarboxylase beta subunit COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit~InterPro IPR005661~KEGG: tpd:Teth39_0907 sodium ion-translocating decarboxylase%2C beta subunit~PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit~PRIAM: Glutaconyl-CoA decarboxylase~SPTR: Sodium ion-translocating decarboxylase%2C beta subunit%3B~TIGRFAM: sodium ion-translocating decarboxylase%2C beta subunit~PFAM: subunit~TIGRFAM: sodium ion-translocating decarboxylase%2C beta subunit gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1828 Toce_1829 Toce_1829 Toce_1829 1834008 1834400 - biotin/lipoyl attachment domain-containing protein COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit~InterPro IPR000089:IPR001882~KEGG: afn:Acfer_1835 biotin/lipoyl attachment domain-containing protein~PFAM: biotin/lipoyl attachment domain-containing protein~SPTR: Methylmalonyl-CoA decarboxylase%2C gamma-subunit%3B~PFAM: Biotin-requiring enzyme gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1829 Toce_1830 Toce_1830 Toce_1830 1834425 1834775 - sodium pump decarboxylase%2C gamma subunit InterPro IPR005899~KEGG: tpd:Teth39_0906 sodium pump decarboxylase%2C gamma subunit~PFAM: sodium pump decarboxylase gamma subunit~SPTR: Oxaloacetate decarboxylase gamma chain%3B~TIGRFAM: sodium pump decarboxylase%2C gamma subunit~PFAM: Oxaloacetate decarboxylase%2C gamma chain~TIGRFAM: sodium pump decarboxylases%2C gamma subunit gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1830 Toce_1831 Toce_1831 Toce_1831 1834796 1836349 - propionyl-CoA carboxylase carboxyltransferase subunit COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta)~InterPro IPR000022:IPR011762:IPR011763~KEGG: amt:Amet_4538 carboxyl transferase~PFAM: carboxyl transferase~SPTR: Carboxyl transferase%3B~PFAM: Carboxyl transferase domain~TIGRFAM: methylmalonyl-CoA decarboxylase alpha subunit gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1831 Toce_1832 Toce_1832 Toce_1832 1836368 1836769 - methylmalonyl-CoA epimerase InterPro IPR017515:IPR004360~KEGG: tpd:Teth39_0905 glyoxalase/bleomycin resistance protein/dioxygenase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase%3B~TIGRFAM: methylmalonyl-CoA epimerase~PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily~TIGRFAM: methylmalonyl-CoA epimerase gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1832 Toce_1833 Toce_1833 Toce_1833 1836766 1837182 - cobalamin B12-binding domain protein COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding)~InterPro IPR006159:IPR006158~KEGG: tpd:Teth39_0903 cobalamin B12-binding domain-containing protein~PFAM: cobalamin B12-binding domain protein~SPTR: Cobalamin B12-binding domain protein%3B~PFAM: B12 binding domain~TIGRFAM: methylmalonyl-CoA mutase C-terminal domain gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1833 Toce_1834 Toce_1834 Toce_1834 1837198 1838877 - methylmalonyl-CoA mutase COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit~InterPro IPR006098:IPR006099~KEGG: tex:Teth514_1855 methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase~PRIAM: Methylmalonyl-CoA mutase~SPTR: Methylmalonyl-CoA mutase%2C large subunit%3B~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: Methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase N-terminal domain gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1834 Toce_1835 Toce_1835 Toce_1835 1839091 1840200 - YidE/YbjL duplication COGs: COG2985 permease~InterPro IPR006512~KEGG: tai:Taci_0300 YidE/YbjL duplication~PFAM: YidE/YbjL duplication domain protein~SPTR: YidE/YbjL duplication%3B~TIGRFAM: YidE/YbjL duplication~PFAM: Predicted Permease Membrane Region~TIGRFAM: YidE/YbjL duplication gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1835 Toce_1836 Toce_1836 Toce_1836 1840291 1841853 - succinate CoA transferase COGs: COG0427 Acetyl-CoA hydrolase~InterPro IPR017821:IPR003702~KEGG: aoe:Clos_0435 acetyl-CoA hydrolase~PFAM: acetyl-CoA hydrolase/transferase~PRIAM: Acetyl-CoA hydrolase~SPTR: Butyryl-CoA : acetate coenzyem A transferase%3B~TIGRFAM: succinate CoA transferase~PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain~TIGRFAM: succinate CoA transferases gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1836 Toce_1837 Toce_1837 Toce_1837 1841937 1842263 - conserved hypothetical protein KEGG: aoe:Clos_0434 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1837 Toce_1838 Toce_1838 Toce_1838 1842340 1843458 - alanine racemase domain protein COGs: COG3616 amino acid aldolase or racemase~InterPro IPR001608~KEGG: cdl:CDR20291_2708 putative amino acid racemase~PFAM: alanine racemase domain protein~SPTR: Putative amino acid racemase%3B~PFAM: Alanine racemase%2C N-terminal domain gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1838 Toce_1839 Toce_1839 Toce_1839 1843695 1843847 - pseudogene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1839 Toce_1840 Toce_1840 Toce_1840 1843905 1844912 - urea amidolyase related protein COGs: COG1984 Allophanate hydrolase subunit 2~InterPro IPR003778~KEGG: tpd:Teth39_1159 UreA amidolyase related protein~PFAM: Allophanate hydrolase subunit 2~PRIAM: Urea carboxylase~SMART: Allophanate hydrolase subunit 2~SPTR: Urea amidolyase related protein%3B~TIGRFAM: urea amidolyase related protein~PFAM: Allophanate hydrolase subunit 2~TIGRFAM: biotin-dependent carboxylase uncharacterized domain gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1840 Toce_1841 Toce_1841 Toce_1841 1844930 1845676 - Allophanate hydrolase subunit 1 COGs: COG2049 Allophanate hydrolase subunit 1~InterPro IPR010016:IPR003833~KEGG: tpd:Teth39_1158 allophanate hydrolase subunit 1~PFAM: Allophanate hydrolase subunit 1~SMART: Allophanate hydrolase subunit 1~SPTR: Allophanate hydrolase subunit 1%3B~PFAM: Allophanate hydrolase subunit 1~TIGRFAM: conserved hypothetical protein TIGR00370 gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1841 Toce_1842 Toce_1842 Toce_1842 1845690 1846460 - LamB/YcsF family protein COGs: COG1540 conserved hypothetical protein~InterPro IPR005501~KEGG: tte:TTE1608 LamB/YcsF family protein~PFAM: LamB/YcsF family protein~SPTR: LamB/YcsF family protein%3B~PFAM: LamB/YcsF family gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1842 Toce_1843 Toce_1843 Toce_1843 1846653 1848116 + Na+/solute symporter COGs: COG4145 Na+/panthothenate symporter~InterPro IPR001734~KEGG: amt:Amet_2980 Na+/solute symporter~PFAM: Na+/solute symporter~SPTR: Na+/solute symporter%3B~PFAM: Sodium:solute symporter family~TIGRFAM: SSS sodium solute transporter superfamily gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1843 Toce_1844 Toce_1844 Toce_1844 1848103 1849539 + integral membrane sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterProIPR003660:IPR003661:IPR003594:IPR004358:IPR 005467~KEGG: amt:Amet_2979 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SPTR: Sensor protein%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1844 Toce_1845 Toce_1845 Toce_1845 1849633 1850988 + two component%2C sigma54 specific%2C transcriptional regulator%2C Fis family COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains~InterProIPR001789:IPR002078:IPR002197:IPR020441:IPR 003593~KEGG: gsu:GSU2915 sigma-54 dependent DNA-binding response regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver%3B AAA ATPase~SPTR: Sigma-54 dependent DNA-binding response regulator%3B~PFAM: Response regulator receiver domain%3B Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1845 Toce_1846 Toce_1846 Toce_1846 1851008 1852198 - conserved hypothetical protein COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family~InterPro IPR005779~KEGG: hypothetical protein~SPTR: YcsG%3B~PFAM: Natural resistance-associated macrophage protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1846 Toce_1847 Toce_1847 Toce_1847 1852500 1853462 + magnesium and cobalt transport protein CorA COGs: COG0598 Mg2+ and Co2+ transporter~InterPro IPR004488:IPR002523~KEGG: mta:Moth_0267 magnesium and cobalt transport protein CorA~PFAM: Mg2 transporter protein CorA family protein~SPTR: Magnesium and cobalt transport protein CorA%3B~TIGRFAM: magnesium and cobalt transport protein CorA~PFAM: CorA-like Mg2+ transporter protein~TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1847 Toce_1848 Toce_1848 Toce_1848 1853586 1853822 - protein translocase subunit secG InterPro IPR004692~KEGG: mta:Moth_0271 preprotein translocase subunit SecG~PFAM: Preprotein translocase SecG subunit~SPTR: Protein translocase subunit secG%3B~TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~TIGRFAM: protein translocase%2C SecG subunit gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1848 Toce_1849 Toce_1849 Toce_1849 1853957 1854382 - ubiquitin-associated- domain-containing protein InterPro IPR000449~KEGG: amt:Amet_3023 ubiquitin-associated domain-containing protein~PFAM: ubiquitin-associated- domain-containing protein~SPTR: Ubiquitin-associated-domain-containing protein%3B~PFAM: UBA/TS-N domain gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1849 Toce_1850 Toce_1850 Toce_1850 1854478 1855767 - enolase COGs: COG0148 Enolase~InterPro IPR000941:IPR020811:IPR020810:IPR020809~KEGG: chy:CHY_0284 phosphopyruvate hydratase~PFAM: Enolase-like~PRIAM: Phosphopyruvate hydratase~SPTR: Enolase%3B~TIGRFAM: enolase~PFAM: Enolase%2C N-terminal domain%3B Enolase%2C C-terminal TIM barrel domain~TIGRFAM: phosphopyruvate hydratase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1850 Toce_1851 Toce_1851 Toce_1851 1855790 1857334 - phosphoglycerate mutase COGs: COG0696 Phosphoglyceromutase~InterPro IPR005995:IPR011258:IPR006124:IPR016160~KEGG: csc:Csac_1951 phosphoglyceromutase~PFAM: BPG-independent PGAM domain protein%3B metalloenzyme domain protein~PRIAM: Phosphoglycerate mutase~SPTR: Phosphoglycerate mutase%3B~TIGRFAM: phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~PFAM: Metalloenzyme superfamily%3B BPG-independent PGAM N-terminus (iPGM_N)~TIGRFAM: 2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1851 Toce_1852 Toce_1852 Toce_1852 1857347 1858105 - triosephosphate isomerase COGs: COG0149 Triosephosphate isomerase~InterPro IPR000652:IPR020861~KEGG: tte:TTE1760 triosephosphate isomerase~PFAM: triosephosphate isomerase~PRIAM: Triose-phosphate isomerase~SPTR: Triosephosphate isomerase%3B~TIGRFAM: triosephosphate isomerase~PFAM: Triosephosphate isomerase~TIGRFAM: triosephosphate isomerase gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1852 Toce_1853 Toce_1853 Toce_1853 1858223 1859407 - phosphoglycerate kinase COGs: COG0126 3-phosphoglycerate kinase~InterPro IPR001576:IPR015911~KEGG: tpd:Teth39_0732 phosphoglycerate kinase~PFAM: phosphoglycerate kinase~PRIAM: Phosphoglycerate kinase~SPTR: Phosphoglycerate kinase%3B~PFAM: Phosphoglycerate kinase gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1853 Toce_1854 Toce_1854 Toce_1854 1859404 1860441 - transcriptional regulator%2C DeoR family COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain~InterPro IPR007324~KEGG: tte:TTE1763 transcriptional regulator~PFAM: putative sugar-binding domain protein~SPTR: Transcriptional regulator%2C contains sigma factor-related N-terminal domain%3B~PFAM: Putative sugar-binding domain gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1854 Toce_1855 Toce_1855 Toce_1855 1860490 1861503 - glyceraldehyde-3-phosphate dehydrogenase COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase~InterProIPR006424:IPR020828:IPR020829:IPR020832:IPR 020831:IPR020830~KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)~SPTR: Glyceraldehyde-3-phosphate dehydrogenase%2C type I%3B~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1855 Toce_1856 Toce_1856 Toce_1856 1861788 1863179 - RNA polymerase%2C sigma 54 subunit%2C RpoN/SigL COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog~InterPro IPR000394:IPR007046:IPR007634~KEGG: pth:PTH_2724 DNA-directed RNA polymerase specialized sigma subunit%2C sigma54-like protein~PFAM: sigma-54 DNA-binding domain protein%3B sigma-54 factor core-binding region%3B sigma-54 factor~SPTR: DNA-directed RNA polymerase specialized sigma subunit%2C sigma54 homolog%3B~TIGRFAM: RNA polymerase sigma-54 factor%2C RpoN~PFAM: Sigma-54 factor%2C Activator interacting domain (AID)%3B Sigma-54%2C DNA binding domain%3B Sigma-54 factor%2C core binding domain~TIGRFAM: RNA polymerase sigma-54 factor gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1856 Toce_1857 Toce_1857 Toce_1857 1863387 1863857 - conserved hypothetical protein KEGG: pth:PTH_0943 hypothetical protein~SPTR: Hypothetical membrane protein gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1857 Toce_1858 Toce_1858 Toce_1858 1863979 1864539 + exonuclease SbcC KEGG: syf:Synpcc7942_2563 exonuclease SbcC~SPTR: Putative uncharacterized protein gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1858 Toce_1859 Toce_1859 Toce_1859 1864577 1865248 - deoxyribose-phosphate aldolase COGs: COG0274 Deoxyribose-phosphate aldolase~InterPro IPR011343:IPR002915:IPR001800~KEGG: ton:TON_1608 deoxyribose-phosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase~PRIAM: Deoxyribose-phosphate aldolase~SPTR: Deoxyribose-phosphate aldolase%3B~TIGRFAM: deoxyribose-phosphate aldolase~PFAM: DeoC/LacD family aldolase~TIGRFAM: deoxyribose-phosphate aldolase gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1859 Toce_1860 Toce_1860 Toce_1860 1865445 1865843 + Superoxide reductase COGs: COG2033 Desulfoferrodoxin~InterPro IPR002742~KEGG: tnp:Tnap_0454 superoxide reductase~PFAM: Desulfoferrodoxin ferrous iron-binding region~PRIAM: Superoxide reductase~SPTR: Superoxide reductase%3B~PFAM: Desulfoferrodoxin~TIGRFAM: desulfoferrodoxin ferrous iron-binding domain gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1860 Toce_1861 Toce_1861 Toce_1861 1865965 1866198 + conserved hypothetical protein KEGG: hor:Hore_05230 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1861 Toce_1862 Toce_1862 Toce_1862 1866367 1866762 + hypothetical protein KEGG: cth:Cthe_3195 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1862 Toce_1863 Toce_1863 Toce_1863 1867117 1868025 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: cbe:Cbei_3901 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1863 Toce_1864 Toce_1864 Toce_1864 1868248 1868952 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003439:IPR003593:IPR017871~KEGG: nth:Nther_2084 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1864 Toce_1865 Toce_1865 Toce_1865 1868952 1871315 + protein of unknown function DUF214 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component~InterPro IPR003838~KEGG: nth:Nther_2083 protein of unknown function DUF214~PFAM: protein of unknown function DUF214~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1865 Toce_1866 Toce_1866 Toce_1866 1871333 1872583 + efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR006143:IPR000089~KEGG: dhd:Dhaf_4678 efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein%3B biotin/lipoyl attachment domain-containing protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1866 Toce_1867 Toce_1867 Toce_1867 1872632 1874176 - AbgT putative transporter COGs: COG2978 Putative p-aminobenzoyl-glutamate transporter~InterPro IPR004697:IPR001589~KEGG: bpf:BpOF4_09755 hypothetical protein~PFAM: AbgT putative transporter~SPTR: Putative uncharacterized protein%3B~PFAM: AbgT putative transporter family~TIGRFAM: p-Aminobenzoyl-glutamate transporter family gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1867 Toce_1868 Toce_1868 Toce_1868 1874190 1875374 - amidohydrolase COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase~InterPro IPR010168:IPR017439:IPR002933:IPR011650~KEGG: cyp:PCC8801_4368 amidohydrolase~PFAM: peptidase M20%3B peptidase dimerisation domain protein~PRIAM: N-acetyldiaminopimelate deacetylase~SPTR: Peptidase%2C M20D family%3B~TIGRFAM: amidohydrolase~PFAM: Peptidase family M20/M25/M40%3B Peptidase dimerisation domain~TIGRFAM: amidohydrolase gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1868 Toce_1869 Toce_1869 Toce_1869 1875640 1876788 + Monogalactosyldiacylglycerol synthase COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase~InterPro IPR009695:IPR007235~KEGG: drm:Dred_1966 monogalactosyldiacylglycerol synthase~PFAM: Monogalactosyldiacylglycerol synthase%3B Glycosyltransferase 28 domain~SPTR: Monogalactosyldiacylglycerol synthase%3B~PFAM: Glycosyltransferase family 28 C-terminal domain%3B Monogalactosyldiacylglycerol (MGDG) synthase gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1869 Toce_1870 Toce_1870 Toce_1870 1876862 1877950 - conserved hypothetical protein KEGG: elf:LF82_p516 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1870 Toce_1871 Toce_1871 Toce_1871 1878022 1879011 - periplasmic binding protein/LacI transcriptional regulator COGs: COG1879 ABC-type sugar transport system periplasmic component~InterPro IPR001761~KEGG: tte:TTE0765 periplasmic sugar-binding proteins~PFAM: periplasmic binding protein/LacI transcriptional regulator~SPTR: Periplasmic sugar-binding proteins%3B~PFAM: family gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1871 Toce_1872 Toce_1872 Toce_1872 1879094 1880053 - monosaccharide ABC transporter membrane protein%2C CUT2 family COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components~InterPro IPR001851~KEGG: tte:TTE0764 ribose/xylose/arabinose/galactoside ABC-type transporter permease~PFAM: inner-membrane translocator~SPTR: Ribose/xylose/arabinose/galactoside ABC-type transport systems%2C permease components%3B~PFAM: Branched-chain amino acid transport system / permease component gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1872 Toce_1873 Toce_1873 Toce_1873 1880050 1881561 - monosaccharide ABC transporter ATP-binding protein%2C CUT2 family COGs: COG1129 ABC-type sugar transport system ATPase component~InterProIPR003593:IPR017871:IPR003439:IPR015861:IPR 015862~KEGG: tte:TTE0763 ABC-type sugar (aldose) transport system%2C ATPase component~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: Putative ribose/galactose/methyl galactoside import ATP-binding protein%3B~PFAM: ABC transporter gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1873 Toce_1874 Toce_1874 Toce_1874 1881595 1883100 - xylulokinase COGs: COG1070 Sugar (pentulose and hexulose) kinase~InterPro IPR018483:IPR006000:IPR018484:IPR018485~KEGG: tpd:Teth39_2059 xylulokinase~PFAM: Carbohydrate kinase%2C FGGY-like~SPTR: Xylulokinase%3B~TIGRFAM: xylulokinase~PFAM: FGGY family of carbohydrate kinases%2C N-terminal domain%3B FGGY family of carbohydrate kinases%2C C-terminal domain~TIGRFAM: D-xylulose kinase gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1874 Toce_1875 Toce_1875 Toce_1875 1883121 1884017 - ketose-bisphosphate aldolase COGs: COG0191 Fructose/tagatose bisphosphate aldolase~InterPro IPR000771~KEGG: str:Sterm_0504 ketose-bisphosphate aldolase~PFAM: ketose-bisphosphate aldolase class-II~PRIAM: Tagatose-bisphosphate aldolase~SPTR: Putative uncharacterized protein%3B~TIGRFAM: ketose-bisphosphate aldolase~PFAM: Fructose-bisphosphate aldolase class-II~TIGRFAM: ketose-bisphosphate aldolases gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1875 Toce_1876 Toce_1876 Toce_1876 1884020 1884979 - PfkB domain protein COGs: COG0524 Sugar kinase ribokinase family~InterPro IPR002173:IPR011611~KEGG: ypz:YPZ3_1906 putative sugar kinase~PFAM: PfkB domain protein~SPTR: Putative sugar kinase%3B~PFAM: pfkB family carbohydrate kinase gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1876 Toce_1877 Toce_1877 Toce_1877 1884981 1885526 - D-lyxose ketol-isomerase COGs: COG3822 ABC-type sugar transport system auxiliary component~KEGG: cce:Ccel_0320 YdaE~PRIAM: D-lyxose ketol-isomerase~SPTR: YdaE%3B~PFAM: Protein of unknown function (DUF1498) gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1877 Toce_1878 Toce_1878 Toce_1878 1885594 1886625 - transcriptional regulator%2C LacI family COGs: COG1609 Transcriptional regulators~InterPro IPR000843:IPR001761~KEGG: tte:TTE0760 transcriptional regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~SPTR: Transcriptional regulator%3B~PFAM: Bacterial regulatory proteins%2C lacI family%3B family gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1878 Toce_1879 Toce_1879 Toce_1879 1886845 1887525 + protein of unknown function DUF1624 COGs: COG3503 membrane protein~InterPro IPR012429~KEGG: dae:Dtox_2070 protein of unknown function DUF1624~PFAM: protein of unknown function DUF1624~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1624) gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1879 Toce_1880 Toce_1880 Toce_1880 1887649 1890600 + copper amine oxidase domain protein COGs: COG4632 Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase~InterPro IPR012854~KEGG: tit:Thit_0459 hypothetical protein~PFAM: copper amine oxidase domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: Copper amine oxidase N-terminal domain%3B Predicted periplasmic protein (DUF2233) gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1880 Toce_1881 Toce_1881 Toce_1881 1890733 1890852 + hypothetical protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1881 Toce_1882 Toce_1882 Toce_1882 1890904 1890999 - pseudogene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1882 Toce_1883 Toce_1883 Toce_1883 1891112 1891213 + hypothetical protein gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1883 Toce_1884 Toce_1884 Toce_1884 1891265 1892383 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein COGs: COG2768 Uncharacterized Fe-S center protein~InterPro IPR017900:IPR017896~KEGG: tpd:Teth39_2087 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1884 Toce_1885 Toce_1885 Toce_1885 1892582 1893919 - Xanthine/uracil/vitamin C permease COGs: COG2252 Permease~InterPro IPR006043~KEGG: sth:STH2861 hypothetical protein~PFAM: Xanthine/uracil/vitamin C permease~SPTR: Putative uncharacterized protein%3B~PFAM: Permease family gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1885 Toce_1886 Toce_1886 Toce_1886 1894238 1895164 + hypothetical protein InterPro IPR018247~KEGG: mno:Mnod_4422 carbamoyl-phosphate synthase%2C large subunit~SPTR: Type I restriction-modification system%2C M subunit gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1886 Toce_1887 Toce_1887 Toce_1887 1895192 1895482 + FlhB domain protein COGs: COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB~InterPro IPR006135:IPR004683~KEGG: mta:Moth_1003 flagellar biosynthesis~PFAM: type III secretion exporter~SPTR: Flagellar biosynthesis%3B~TIGRFAM: FlhB domain protein~PFAM: FlhB HrpN YscU SpaS Family~TIGRFAM: flhB C-terminus-related protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1887 Toce_1888 Toce_1888 Toce_1888 1895628 1897808 + S-layer domain protein InterPro IPR005075:IPR001119~KEGG: dsy:DSY4050 hypothetical protein~PFAM: S-layer domain protein%3B Propeptide PepSY amd peptidase M4~SPTR: Putative uncharacterized protein%3B~PFAM: S-layer homology domain%3B Peptidase propeptide and YPEB domain~TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase%2C Streptococcus agalactiae type gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1888 Toce_1889 Toce_1889 Toce_1889 1897857 1899584 - pyruvate phosphate dikinase PEP/pyruvate-binding protein InterPro IPR002192~KEGG: tte:TTE0164 phosphoenolpyruvate synthase/pyruvate phosphate dikinase~PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding~SPTR: Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain protein%3B~PFAM: Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1889 Toce_1890 Toce_1890 Toce_1890 1899795 1900328 - SNARE associated Golgi protein-related protein COGs: COG0586 membrane-associated protein~InterPro IPR015414~KEGG: tte:TTE0276 hypothetical protein~PFAM: SNARE associated Golgi protein~SPTR: Putative uncharacterized protein DedA%3B~PFAM: SNARE associated Golgi protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1890 Toce_1891 Toce_1891 Toce_1891 1900484 1901497 + O-sialoglycoprotein endopeptidase COGs: COG0533 Metal-dependent protease with possible chaperone activity~InterPro IPR017861:IPR000905~KEGG: aoe:Clos_2467 putative DNA-binding/iron metalloprotein/AP endonuclease~PFAM: peptidase M22 glycoprotease~PRIAM: O-sialoglycoprotein endopeptidase~SPTR: Metalloendopeptidase%2C glycoprotease family%3B~TIGRFAM: metalloendopeptidase%2C glycoprotease family~PFAM: Glycoprotease family~TIGRFAM: metalloendopeptidase%2C putative%2C glycoprotease family gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1891 Toce_1892 Toce_1892 Toce_1892 1901601 1902071 - (SSU ribosomal protein S18P)-alanine acetyltransferase COGs: COG0456 Acetyltransferase~InterPro IPR006464:IPR000182~KEGG: bmq:BMQ_0258 ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Ribosomal-protein (S18)-alanine acetyltransferase%3B~TIGRFAM: ribosomal-protein-alanine acetyltransferase~PFAM: Acetyltransferase (GNAT) family~TIGRFAM: ribosomal-protein-alanine acetyltransferase gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1892 Toce_1893 Toce_1893 Toce_1893 1902058 1902771 - peptidase M22 glycoprotease COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone~InterPro IPR000905~KEGG: cth:Cthe_1775 peptidase M22%2C glycoprotease~PFAM: peptidase M22 glycoprotease~SPTR: Putative uncharacterized protein%3B~PFAM: Glycoprotease family gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1893 Toce_1894 Toce_1894 Toce_1894 1902768 1903235 - protein of unknown function UPF0079 COGs: COG0802 ATPase or kinase~InterPro IPR003442~KEGG: amt:Amet_0803 hypothetical protein~PFAM: protein of unknown function UPF0079~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised P-loop hydrolase UPF0079~TIGRFAM: conserved hypothetical nucleotide-binding protein gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1894 Toce_1895 Toce_1895 Toce_1895 1903545 1904162 - conserved hypothetical protein COGs: COG3601 membrane protein~KEGG: cbb:CLD_0603 hypothetical protein~SPTR: Putative membrane protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1895 Toce_1896 Toce_1896 Toce_1896 1904502 1905398 - 6-phosphogluconate dehydrogenase (decarboxylating) COGs: COG1023 6-phosphogluconate dehydrogenase~InterPro IPR006183:IPR004849:IPR006115:IPR006114~KEGG: cbk:CLL_A1312 6-phosphogluconate dehydrogenase-like protein~PFAM: 6-phosphogluconate dehydrogenase NAD-binding%3B 6-phosphogluconate dehydrogenase domain protein~SPTR: 6-phosphogluconate dehydrogenase%2C decarboxylating%3B~TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase%3B 6-phosphogluconate dehydrogenase%2C C-terminal domain~TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)%3B 6-phosphogluconate dehydrogenase%2C decarboxylating gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1896 Toce_1897 Toce_1897 Toce_1897 1905477 1906109 - 2-keto-3-deoxy-phosphogluconate aldolase COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase~InterPro IPR000887~KEGG: tit:Thit_0170 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase~PFAM: KDPG and KHG aldolase~SPTR: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase%3B~TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase~PFAM: KDPG and KHG aldolase~TIGRFAM: Entner-Doudoroff aldolase gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1897 Toce_1898 Toce_1898 Toce_1898 1906131 1907093 - Glyoxylate reductase COGs: COG1052 Lactate dehydrogenase and related dehydrogenase~InterPro IPR006140:IPR006139~KEGG: tpd:Teth39_2066 D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~PRIAM: Glyoxylate reductase~SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain%3B D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1898 Toce_1899 Toce_1899 Toce_1899 1907118 1908167 - Malate/L-lactate dehydrogenase COGs: COG2055 Malate/L-lactate dehydrogenase~InterPro IPR003767~KEGG: bbe:BBR47_30890 putative malate/L-sulfolactate dehydrogenase~PFAM: Malate/L-lactate dehydrogenase~SPTR: Malate/L-lactate dehydrogenase%3B~PFAM: Malate/L-lactate dehydrogenase gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1899 Toce_1900 Toce_1900 Toce_1900 1908198 1908701 - PTS system sorbose subfamily IIB component COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB~InterPro IPR004720~KEGG: tpd:Teth39_2067 PTS system sorbose subfamily IIB component~PFAM: PTS system sorbose subfamily IIB component~SPTR: PTS system sorbose subfamily IIB component%3B~PFAM: PTS system sorbose subfamily IIB component gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1900 Toce_1901 Toce_1901 Toce_1901 1908721 1909122 - PTS system fructose subfamily IIA component COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA~InterPro IPR004701~KEGG: tit:Thit_0165 PTS system fructose subfamily IIA component~PFAM: PTS system fructose subfamily IIA component~SPTR: PTS system fructose subfamily IIA component%3B~PFAM: PTS system fructose IIA component~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIA component gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1901 Toce_1902 Toce_1902 Toce_1902 1909254 1910114 - PTS system IID component%2C Man family (TC 4.A.6) COGs: COG3716 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IID~InterPro IPR004704~KEGG: tpd:Teth39_2068 PTS system mannose/fructose/sorbose family IID component~PFAM: PTS system mannose/fructose/sorbose family IID component~SPTR: PTS system mannose/fructose/sorbose family IID component%3B~PFAM: PTS system mannose/fructose/sorbose family IID component gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1902 Toce_1903 Toce_1903 Toce_1903 1910139 1910918 - phosphotransferase system PTS sorbose-specific IIC subunit COGs: COG3715 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIC~InterPro IPR004700~KEGG: tit:Thit_0166 phosphotransferase system PTS sorbose-specific IIC subunit~PFAM: phosphotransferase system PTS sorbose-specific IIC subunit~SPTR: Phosphotransferase system PTS sorbose-specific IIC subunit%3B~PFAM: PTS system sorbose-specific iic component gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1903 Toce_1904 Toce_1904 Toce_1904 1911027 1911503 - PTS system sorbose subfamily IIB component COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB~InterPro IPR013838:IPR004720~KEGG: cbk:CLL_A3359 PTS system sorbose subfamily IIB component~PFAM: PTS system sorbose subfamily IIB component~SPTR: Protein-N(Pi)-phosphohistidine--sugar phosphotransferase%3B~PFAM: PTS system sorbose subfamily IIB component gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1904 Toce_1905 Toce_1905 Toce_1905 1911520 1911942 - PTS system fructose subfamily IIA component COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA~InterPro IPR004701~KEGG: cbk:CLL_A3360 PTS system fructose IIA component~PFAM: PTS system fructose subfamily IIA component~SPTR: PTS system fructose subfamily IIA component%3B~PFAM: PTS system fructose IIA component~TIGRFAM: PTS system%2C mannose/fructose/sorbose family%2C IIA component gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1905 Toce_1906 Toce_1906 Toce_1906 1912112 1914745 - PTS system transcriptional activator COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain~InterProIPR003593:IPR002078:IPR002464:IPR011608:IPR 004701~KEGG: cbk:CLL_A3361 transcriptional regulatory protein LevR~PFAM: sigma-54 factor interaction domain-containing protein%3B PRD domain protein%3B PTS system fructose subfamily IIA component~SMART: AAA ATPase~SPTR: PTS system transcriptional activator%3B~PFAM: PTS system fructose IIA component%3B Sigma-54 interaction domain%3B PRD domain gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1906 Toce_1907 Toce_1907 Toce_1907 1914962 1915309 - conserved hypothetical protein KEGG: tit:Thit_0882 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Coenzyme PQQ synthesis protein D (PqqD) gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1907 Toce_1908 Toce_1908 Toce_1908 1915365 1917269 - oligopeptide transporter%2C OPT family COGs: COG1297 membrane protein~InterPro IPR004813:IPR004814~KEGG: tit:Thit_0881 oligopeptide transporter%2C OPT family~PFAM: Oligopeptide transporter OPT superfamily protein~SPTR: Oligopeptide transporter%2C OPT family%3B~TIGRFAM: oligopeptide transporter%2C OPT family%3B oligopeptide transporters%2C OPT superfamily~PFAM: OPT oligopeptide transporter protein~TIGRFAM: oligopeptide transporters%2C OPT superfamily%3B putative oligopeptide transporter%2C OPT family gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1908 Toce_1909 Toce_1909 Toce_1909 1917522 1918679 - amidohydrolase COGs: COG1228 Imidazolonepropionase and related amidohydrolase~InterPro IPR006680~KEGG: cth:Cthe_1777 amidohydrolase~PFAM: amidohydrolase~SPTR: Amidohydrolase%3B~PFAM: Amidohydrolase family gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1909 Toce_1910 Toce_1910 Toce_1910 1918774 1919592 - D-aminopeptidase DppA COGs: COG2362 D-aminopeptidase~InterPro IPR007035~KEGG: tle:Tlet_0252 peptidase M55 D-aminopeptidase~PFAM: peptidase M55 D-aminopeptidase~SPTR: Peptidase M55 D-aminopeptidase%3B~PFAM: D-aminopeptidase gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1910 Toce_1911 Toce_1911 Toce_1911 1919650 1920360 - peptidase C26 COGs: COG2071 glutamine amidotransferase~InterPro IPR011697:IPR017926~KEGG: peptidase C26~PFAM: peptidase C26~SPTR: Peptidase C26%3B~PFAM: Peptidase C26 gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1911 Toce_1912 Toce_1912 Toce_1912 1920362 1921597 - metal dependent phosphohydrolase COGs: COG2206 HD-GYP domain~InterPro IPR003607:IPR006675:IPR006674~KEGG: mta:Moth_2495 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~SPTR: Metal dependent phosphohydrolase%3B~TIGRFAM: metal dependent phophohydrolase~PFAM: HD domain~TIGRFAM: uncharacterized domain HDIG gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1912 Toce_1913 Toce_1913 Toce_1913 1921711 1922061 - transcriptional modulator of MazE/toxin%2C MazF COGs: COG2337 Growth inhibitor~InterPro IPR003477~KEGG: tte:TTE2166 growth inhibitor~PFAM: PemK family protein~SPTR: Growth inhibitor%3B~PFAM: PemK-like protein gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1913 Toce_1914 Toce_1914 Toce_1914 1922063 1922338 - transcriptional regulator%2C CopG family KEGG: aoe:Clos_2274 CopG family transcriptional regulator~SPTR: Putative transcriptional regulator%2C CopG family gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1914 Toce_1915 Toce_1915 Toce_1915 1922399 1923574 - alanine racemase COGs: COG0787 Alanine racemase~InterPro IPR020622:IPR000821:IPR001608:IPR011079~KEGG: pth:PTH_0660 alanine racemase~PFAM: alanine racemase domain protein~PRIAM: Alanine racemase~SPTR: Alanine racemase%3B~TIGRFAM: alanine racemase~PFAM: Alanine racemase%2C C-terminal domain%3B Alanine racemase%2C N-terminal domain~TIGRFAM: alanine racemase gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1915 Toce_1916 Toce_1916 Toce_1916 1923537 1925150 - carbohydrate kinase%2C YjeF related protein COGs: COG0063 sugar kinase~InterPro IPR017953:IPR004443:IPR000631~KEGG: pth:PTH_0657 carbohydrate kinase~PFAM: YjeF-family domain protein%3B protein of unknown function UPF0031~SPTR: Predicted Carbohydrate kinase%3B~TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: YjeF-related protein N-terminus%3B Carbohydrate kinase~TIGRFAM: yjeF C-terminal region%2C hydroxyethylthiazole kinase-related%3B yjeF N-terminal region gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1916 Toce_1917 Toce_1917 Toce_1917 1925110 1925526 - holo-acyl-carrier-protein synthase COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase)~InterPro IPR002582:IPR004568:IPR008278~KEGG: tte:TTE2171 4'-phosphopantetheinyl transferase~PFAM: 4'-phosphopantetheinyl transferase~SPTR: Holo-[acyl-carrier protein] synthase%3B~TIGRFAM: holo-acyl-carrier-protein synthase~PFAM: 4'-phosphopantetheinyl transferase superfamily~TIGRFAM: phosphopantethiene--protein transferase domain%3B holo-[acyl-carrier-protein] synthase gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1917 Toce_1918 Toce_1918 Toce_1918 1925743 1926177 + heat shock protein Hsp20 COGs: COG0071 Molecular chaperone (small heat shock protein)~InterPro IPR002068~KEGG: cth:Cthe_3125 heat shock protein HSP20~PFAM: heat shock protein Hsp20~SPTR: Heat shock protein Hsp20%3B~PFAM: Hsp20/alpha crystallin family gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1918 Toce_1919 Toce_1919 Toce_1919 1926308 1927783 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1919 Toce_1920 Toce_1920 Toce_1920 1927851 1929110 - conserved hypothetical protein KEGG: mta:Moth_1543 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: NPCBM/NEW2 domain%3B Pilus assembly protein%2C PilO gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1920 Toce_1921 Toce_1921 Toce_1921 1929149 1929661 - Fimbrial assembly family protein InterPro IPR007813~KEGG: mta:Moth_1544 fimbrial assembly~PFAM: Fimbrial assembly family protein~SPTR: Fimbrial assembly%3B~PFAM: Fimbrial assembly protein (PilN) gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1921 Toce_1922 Toce_1922 Toce_1922 1929724 1930620 - type IV pilus assembly protein PilM COGs: COG4972 Tfp pilus assembly protein ATPase PilM~InterPro IPR005883~KEGG: mta:Moth_1545 pilus-associated protein PilM~SPTR: Pilus-associated protein pilM%3B~TIGRFAM: type IV pilus assembly protein PilM~PFAM: Competence protein A~TIGRFAM: type IV pilus assembly protein PilM gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1922 Toce_1923 Toce_1923 Toce_1923 1930695 1931924 - hypothetical protein KEGG: dau:Daud_0997 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1923 Toce_1924 Toce_1924 Toce_1924 1931939 1932481 - conserved hypothetical protein InterPro IPR012902~KEGG: dau:Daud_0973 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain%3B general secretion pathway protein J gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1924 Toce_1925 Toce_1925 Toce_1925 1932478 1932906 - conserved hypothetical protein InterPro IPR012902~KEGG: dae:Dtox_2704 hypothetical protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: prepilin-type N-terminal cleavage/methylation domain gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1925 Toce_1926 Toce_1926 Toce_1926 1933003 1933758 - type 4 prepilin peptidase 1 COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase~InterPro IPR014032:IPR010627:IPR000045~KEGG: mta:Moth_1550 Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A~PFAM: peptidase A24A domain protein%3B peptidase A24A prepilin type IV~PRIAM: Prepilin peptidase~SPTR: Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A%3B~PFAM: Bacterial Peptidase A24 N-terminal domain%3B Type IV leader peptidase family gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1926 Toce_1927 Toce_1927 Toce_1927 1933945 1934460 - N-terminal methylation COGs: COG2165 Type II secretory pathway pseudopilin PulG~InterPro IPR001120:IPR000983:IPR012902~KEGG: mta:Moth_1551 N-terminal methylation~SPTR: N-terminal methylation%3B~PFAM: Prokaryotic N-terminal methylation motif%3B Bacterial type II secretion system protein G~TIGRFAM: general secretion pathway protein G%3B prepilin-type N-terminal cleavage/methylation domain gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1927 Toce_1928 Toce_1928 Toce_1928 1934556 1935770 - Type II secretion system F domain protein COGs: COG1459 Type II secretory pathway component PulF~InterPro IPR001992:IPR003004:IPR018076~KEGG: mta:Moth_1552 type II secretion system protein~PFAM: Type II secretion system F domain~SPTR: Type II secretion system protein%3B~PFAM: Bacterial type II secretion system protein F domain gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1928 Toce_1929 Toce_1929 Toce_1929 1935950 1936978 - twitching motility protein COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT~InterPro IPR003593:IPR001482:IPR006321~KEGG: mta:Moth_1553 twitching motility protein~PFAM: type II secretion system protein E~SMART: AAA ATPase~SPTR: Twitching motility protein%3B~TIGRFAM: twitching motility protein~PFAM: Type II/IV secretion system protein~TIGRFAM: pilus retraction protein PilT gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1929 Toce_1930 Toce_1930 Toce_1930 1937003 1938700 - type II secretion system protein E (GspE) COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB~InterPro IPR003593:IPR001482:IPR007831~KEGG: mta:Moth_1554 type II secretion system protein E~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein~SMART: AAA ATPase~SPTR: Type II secretion system protein E%3B~PFAM: Type II/IV secretion system protein%3B GSPII_E N-terminal domain~TIGRFAM: type IV-A pilus assembly ATPase PilB%3B pilus retraction protein PilT%3B general secretory pathway protein E gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1930 Toce_1931 Toce_1931 Toce_1931 1938820 1939284 - Acetyltransferase%2C GNAT family InterPro IPR000182~KEGG: bwe:BcerKBAB4_3495 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1931 Toce_1932 Toce_1932 Toce_1932 1939435 1939980 + Cupin 2 conserved barrel domain protein InterPro IPR001387:IPR013096~KEGG: drm:Dred_1558 cupin 2 domain-containing protein~PFAM: Cupin 2 conserved barrel domain protein%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Cupin 2%2C conserved barrel domain protein%3B~PFAM: Cupin domain%3B Helix-turn-helix gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1932 Toce_1933 Toce_1933 Toce_1933 1940035 1941111 - peptidase M24 COGs: COG0006 Xaa-Pro aminopeptidase~InterPro IPR001131:IPR001714:IPR000587:IPR000994~KEGG: cbl:CLK_3532 M24 family metallopeptidase~PFAM: peptidase M24%3B creatinase~SPTR: Peptidase M24%3B~PFAM: Metallopeptidase family M24%3B Creatinase/Prolidase N-terminal domain gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1933 Toce_1934 Toce_1934 Toce_1934 1941175 1942593 - amino acid/polyamine/organocation transporter%2C APC superfamily (TC 2.A.3) COGs: COG0531 Amino acid transporter~InterPro IPR002293:IPR004841~KEGG: cbf:CLI_0414 amino acid permease family protein~PFAM: amino acid permease-associated region~SPTR: Amino acid permease family protein%3B~PFAM: Amino acid permease gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1934 Toce_1935 Toce_1935 Toce_1935 1942882 1943289 - pyridoxamine 5'-phosphate oxidase-related FMN-binding protein COGs: COG5015 conserved hypothetical protein~InterPro IPR011576~KEGG: drm:Dred_0307 pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding~PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding~SPTR: Pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding%3B~PFAM: Pyridoxamine 5'-phosphate oxidase gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1935 Toce_1936 Toce_1936 Toce_1936 1943476 1944849 - AMP-dependent synthetase and ligase COGs: COG1541 Coenzyme F390 synthetase~InterPro IPR000873~KEGG: tit:Thit_0986 coenzyme F390 synthetase~PFAM: AMP-dependent synthetase and ligase~SPTR: Coenzyme F390 synthetase%3B~PFAM: AMP-binding enzyme gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1936 Toce_1937 Toce_1937 Toce_1937 1944948 1945669 - pseudogene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1937 Toce_1938 Toce_1938 Toce_1938 1945828 1946253 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: chy:CHY_1896 nucleotidyltransferase domain-containing protein~PFAM: DNA polymerase beta domain protein region~SPTR: Nucleotidyltransferase domain protein%3B~PFAM: Nucleotidyltransferase domain gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1938 Toce_1939 Toce_1939 Toce_1939 1946246 1946665 + protein of unknown function DUF86 COGs: COG2445 conserved hypothetical protein~InterPro IPR008201~KEGG: ckr:CKR_1141 hypothetical protein~PFAM: protein of unknown function DUF86~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF86 gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1939 Toce_1940 Toce_1940 Toce_1940 1946694 1948274 - beta-lactamase domain-containing protein COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily~KEGG: dau:Daud_0808 beta-lactamase domain-containing protein~SPTR: Beta-lactamase domain protein%3B~PFAM: Metallo-beta-lactamase superfamily%3B RNA-metabolising metallo-beta-lactamase gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1940 Toce_1941 Toce_1941 Toce_1941 1949187 1949993 - Excinuclease ABC C subunit domain protein InterPro IPR000305~KEGG: sal:Sala_0696 hypothetical protein~SMART: Excinuclease ABC C subunit domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: GIY-YIG catalytic domain gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1941 Toce_1942 Toce_1942 Toce_1942 1950044 1951681 - protein of unknown function DUF1524 RloF InterPro IPR004919:IPR011089~KEGG: eta:ETA_13690 hypothetical protein~PFAM: protein of unknown function DUF1524 RloF%3B protein of unknown function DUF262~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1524)%3B Protein of unknown function DUF262 gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1942 Toce_1943 Toce_1943 Toce_1943 1951712 1951960 - protein of unknown function DUF262 InterPro IPR004919~KEGG: eta:ETA_13690 hypothetical protein~PFAM: protein of unknown function DUF262~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function DUF262 gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1943 Toce_1944 Toce_1944 Toce_1944 1952311 1953534 + pseudogene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1944 Toce_1945 Toce_1945 Toce_1945 1954060 1957221 + helicase domain protein InterPro IPR014001:IPR001650:IPR000330:IPR014021~KEGG: tex:Teth514_1830 helicase domain-containing protein~PFAM: helicase domain protein%3B SNF2-related protein~SMART: helicase domain protein%3B DEAD-like helicase~SPTR: Helicase domain protein%3B~PFAM: Helicase conserved C-terminal domain%3B SNF2 family N-terminal domain gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1945 Toce_1946 Toce_1946 Toce_1946 1957222 1957947 + conserved hypothetical protein KEGG: tex:Teth514_1829 hypothetical protein~SPTR: Putative uncharacterized protein gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1946 Toce_1947 Toce_1947 Toce_1947 1957961 1960057 + Site-specific DNA-methyltransferase (adenine-specific) COGs: COG2189 Adenine specific DNA methylase Mod~InterPro IPR002052:IPR002295:IPR002941~KEGG: cpf:CPF_0361 type III restriction-modification system%2C Mod subunit~PFAM: DNA methylase N-4/N-6 domain protein~PRIAM: Site-specific DNA-methyltransferase (adenine-specific)~SPTR: Site-specific DNA-methyltransferase%3B~PFAM: DNA methylase gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1947 Toce_1948 Toce_1948 Toce_1948 1960072 1963170 + Type III site-specific deoxyribonuclease COGs: COG3587 Restriction endonuclease~InterPro IPR014001:IPR006935~KEGG: tex:Teth514_1827 type III restriction enzyme%2C res subunit~PFAM: type III restriction protein res subunit~PRIAM: Type III site-specific deoxyribonuclease~SMART: DEAD-like helicase~SPTR: Type III restriction enzyme%2C res subunit%3B~PFAM: Type III restriction enzyme%2C res subunit gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1948 Toce_1949 Toce_1949 Toce_1949 1963225 1965276 - UvrD/REP helicase COGs: COG0210 Superfamily I DNA and RNA helicase~InterPro IPR000212:IPR014016~KEGG: ppd:Ppro_3627 superfamily I DNA/RNA helicase-like protein~PFAM: UvrD/REP helicase~SPTR: Superfamily I DNA and RNA helicases-like protein%3B~PFAM: UvrD/REP helicase gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1949 Toce_1950 Toce_1950 Toce_1950 1965401 1966516 - protein of unknown function DUF195 COGs: COG1322 conserved hypothetical protein~InterPro IPR003798~KEGG: cpo:COPRO5265_0047 RmuC domain protein~PFAM: protein of unknown function DUF195~SPTR: RmuC domain protein%3B~PFAM: RmuC family gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1950 Toce_1951 Toce_1951 Toce_1951 1967127 1967384 - pseudogene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1951 Toce_1952 Toce_1952 Toce_1952 1967453 1967863 - pseudogene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1952 Toce_1953 Toce_1953 Toce_1953 1967950 1969179 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR000169:IPR001584:IPR017894~KEGG: chy:CHY_1117 ISChy4%2C transposase~PFAM: Integrase catalytic region~SPTR: ISChy4%2C transposase%3B~PFAM: Mu transposase%2C C-terminal%3B Integrase core domain gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1953 Toce_1954 Toce_1954 Toce_1954 1969176 1969946 + IstB transposition helper protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR001270:IPR002611~KEGG: chy:CHY_1116 ISChy4%2C transposition helper protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: ISChy4%2C transposition helper protein%3B~PFAM: IstB-like ATP binding protein gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1954 Toce_1955 Toce_1955 Toce_1955 1969974 1970120 - conserved hypothetical protein KEGG: mba:Mbar_A0556 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1955 Toce_1956 Toce_1956 Toce_1956 1970409 1971092 + transposase IS3/IS911 family protein InterPro IPR002514~KEGG: cbi:CLJ_B3075 transposase~PFAM: transposase IS3/IS911 family protein~SPTR: Putative uncharacterized protein%3B~manually curated~PFAM: Transposase gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1956 Toce_1957 Toce_1957 Toce_1957 1971131 1972003 + Integrase catalytic region COGs: COG2801 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: cdl:CDR20291_1072 integrase%2C catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase%2C catalytic region%3B~PFAM: Integrase core domain gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1957 Toce_1958 Toce_1958 Toce_1958 1972082 1972813 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1958 Toce_1959 Toce_1959 Toce_1959 1972807 1974330 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1959 Toce_1960 Toce_1960 Toce_1960 1974472 1975020 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: pjd:Pjdr2_6089 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1960 Toce_1961 Toce_1961 Toce_1961 1975167 1975520 + transcriptional regulator COGs: COG1733 transcriptional regulator protein~InterPro IPR002577~KEGG: cbe:Cbei_3315 HxlR family transcriptional regulator~PFAM: helix-turn-helix HxlR type~SPTR: Transcriptional regulator%2C HxlR family%3B~PFAM: HxlR-like helix-turn-helix gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1961 Toce_1962 Toce_1962 Toce_1962 1975685 1978301 - pseudogene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1962 Toce_1963 Toce_1963 Toce_1963 1978394 1978582 - pseudogene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1963 Toce_1964 Toce_1964 Toce_1964 1979040 1979258 - pseudogene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1964 Toce_1965 Toce_1965 Toce_1965 1979233 1979580 - cation transporter COGs: COG0168 Trk-type K+ transport systems membrane components~InterPro IPR003445~KEGG: aoe:Clos_0674 cation transporter~PFAM: cation transporter~SPTR: Cation transporter%3B~PFAM: Cation transport protein gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1965 Toce_1966 Toce_1966 Toce_1966 1979667 1979768 - pseudogene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1966 Toce_1967 Toce_1967 Toce_1967 1980055 1981884 - glutamine--fructose-6-phosphate transaminase COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains~InterPro IPR005855:IPR000583:IPR001347:IPR017932~KEGG: dhd:Dhaf_0836 glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: sugar isomerase (SIS)%3B glutamine amidotransferase class-II~SPTR: Glutamine--fructose-6-phosphate transaminase (Isomerizing)%3B~TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: SIS domain%3B Glutamine amidotransferases class-II~TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1967 Toce_1968 Toce_1968 Toce_1968 1982233 1983573 - phosphoglucosamine mutase COGs: COG1109 Phosphomannomutase~InterProIPR016066:IPR000890:IPR005841:IPR006352:IPR 005844:IPR005845:IPR005846:IPR005843~KEGG: cac:CAC0484 phosphomannomutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase~SPTR: Phosphoglucosamine mutase%3B~TIGRFAM: phosphoglucosamine mutase~PFAM: Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%3B Phosphoglucomutase/phosphomannomutase%2C C-terminal domain%3B Phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I~TIGRFAM: phosphoglucosamine mutase gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1968 Toce_1969 Toce_1969 Toce_1969 1983617 1984822 - YbbR family protein COGs: COG4856 conserved hypothetical protein~InterPro IPR012505~KEGG: tpd:Teth39_0458 YbbR family protein~PFAM: YbbR family protein~SPTR: YbbR family protein%3B~PFAM: YbbR-like protein gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1969 Toce_1970 Toce_1970 Toce_1970 1984815 1985636 - protein of unknown function DUF147 COGs: COG1624 conserved hypothetical protein~InterPro IPR014046:IPR003390~KEGG: tit:Thit_1921 protein of unknown function DUF147~PFAM: protein of unknown function DUF147~SPTR: Putative uncharacterized protein%3B~PFAM: DisA bacterial checkpoint controller nucleotide-binding~TIGRFAM: conserved hypothetical protein TIGR00159 gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1970 Toce_1971 Toce_1971 Toce_1971 1985714 1986568 - conserved hypothetical protein KEGG: nth:Nther_2043 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1971 Toce_1972 Toce_1972 Toce_1972 1986722 1987966 + iron-only hydrogenase maturation protein HydF COGs: COG1160 GTPase~InterPro IPR001806:IPR005225:IPR002917~KEGG: tpd:Teth39_0245 small GTP-binding protein~PFAM: GTP-binding protein HSR1-related~SPTR: Small GTP-binding protein%3B~TIGRFAM: small GTP-binding protein~PFAM: GTPase of unknown function~TIGRFAM: small GTP-binding protein domain gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1972 Toce_1973 Toce_1973 Toce_1973 1988057 1989127 - arsenical-resistance protein COGs: COG0798 Arsenite efflux pump ACR3 and related permease~InterPro IPR004706:IPR002657~KEGG: cth:Cthe_1111 bile acid:sodium symporter~PFAM: Bile acid:sodium symporter~SPTR: Arsenical-resistance protein%3B~TIGRFAM: arsenical-resistance protein~PFAM: Sodium Bile acid symporter family~TIGRFAM: arsenical-resistance protein gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1973 Toce_1974 Toce_1974 Toce_1974 1989168 1989536 - regulatory protein ArsR InterPro IPR001845~KEGG: mta:Moth_2209 ArsR family transcriptional regulator~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Transcriptional regulator%2C ArsR family%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1974 Toce_1975 Toce_1975 Toce_1975 1989792 1990124 + transcriptional regulator%2C ArsR family COGs: COG0640 transcriptional regulator protein~InterPro IPR001845~KEGG: fno:Fnod_1486 regulatory protein ArsR~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Regulatory protein ArsR%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1975 Toce_1976 Toce_1976 Toce_1976 1990121 1991293 + permease COGs: COG0701 permease~InterPro IPR005524~KEGG: fno:Fnod_1485 permease~PFAM: permease~SPTR: Permease%3B~PFAM: Predicted permease gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1976 Toce_1977 Toce_1977 Toce_1977 1991434 1991673 + redox-active disulfide protein 2 InterPro IPR005243~KEGG: fno:Fnod_1484 redox-active disulfide protein 2~SPTR: Redox-active disulfide protein 2%3B~TIGRFAM: redox-active disulfide protein 2~TIGRFAM: small redox-active disulfide protein 2 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1977 Toce_1978 Toce_1978 Toce_1978 1991747 1992343 - protein of unknown function DUF205 COGs: COG0344 membrane protein~InterPro IPR020788:IPR003811~KEGG: tpd:Teth39_0840 membrane protein~PFAM: protein of unknown function DUF205~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF205)~TIGRFAM: conserved hypothetical integral membrane protein TIGR00023 gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1978 Toce_1979 Toce_1979 Toce_1979 1992463 1993938 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1979 Toce_1980 Toce_1980 Toce_1980 1994072 1995109 - selenophosphate synthase COGs: COG0709 Selenophosphate synthase~Contains selenocysteine~InterPro IPR004536:IPR000728:IPR010918~KEGG: adg:Adeg_0304 selenide%2C water dikinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein~SPTR: Selenide%2C water dikinase%3B~TIGRFAM: selenide%2C water dikinase~manually curated~PFAM: AIR synthase related protein%2C N-terminal domain%3B AIR synthase related protein%2C C-terminal domain~TIGRFAM: selenium donor protein gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1980 Toce_1981 Toce_1981 Toce_1981 1995292 1995564 + hypothetical protein KEGG: cpo:COPRO5265_0231 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF3343) gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1981 Toce_1982 Toce_1982 Toce_1982 1995600 1995917 - phosphotransferase system PTS lactose/cellobiose-specific IIA subunit COGs: COG1447 Phosphotransferase system cellobiose-specific component IIA~InterPro IPR003188~KEGG: tpd:Teth39_1697 phosphotransferase system PTS%2C lactose/cellobiose-specific IIA subunit~PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit~SPTR: Phosphotransferase system cellobiose-specific component IIA%3B~PFAM: PTS system%2C Lactose/Cellobiose specific IIA subunit gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1982 Toce_1983 Toce_1983 Toce_1983 1995937 1997253 - PTS system%2C lactose/cellobiose family IIC subunit COGs: COG1455 Phosphotransferase system cellobiose-specific component IIC~InterPro IPR004501:IPR003352~KEGG: tpd:Teth39_1698 PTS system lactose/cellobiose family IIC subunit~PFAM: phosphotransferase system EIIC~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: PTS system%2C lactose/cellobiose family IIC subunit%3B~TIGRFAM: PTS system%2C lactose/cellobiose family IIC subunit~PFAM: Phosphotransferase system%2C EIIC~TIGRFAM: phosphotransferase system%2C cellobiose specific%2C IIC component%3B PTS system%2C lactose/cellobiose family IIC component gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1983 Toce_1984 Toce_1984 Toce_1984 1997266 1997592 - phosphotransferase system lactose/cellobiose-specific IIB subunit COGs: COG1440 Phosphotransferase system cellobiose-specific component IIB~InterPro IPR003501:IPR013012~KEGG: tit:Thit_0585 phosphotransferase system lactose/cellobiose-specific IIB subunit~PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit~SPTR: Phosphotransferase system%2C lactose/cellobiose-specific IIB subunit%3B~PFAM: PTS system%2C Lactose/Cellobiose specific IIB subunit gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1984 Toce_1985 Toce_1985 Toce_1985 1997641 1997865 - conserved hypothetical protein InterPro IPR002355~KEGG: tit:Thit_0584 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1985 Toce_1986 Toce_1986 Toce_1986 1997875 1999962 - transcriptional antiterminator%2C BglG family COGs: COG3711 Transcriptional antiterminator~InterPro IPR011608:IPR003501:IPR002178:IPR013011~KEGG: tex:Teth514_0531 transcriptional antiterminator%2C BglG~PFAM: PRD domain protein%3B phosphotransferase system lactose/cellobiose-specific IIB subunit~PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase~SPTR: PTS modulated transcriptional regulator%2C MtlR family%3B~PFAM: Mga helix-turn-helix domain%3B HTH domain%3B PTS system%2C Lactose/Cellobiose specific IIB subunit%3B PRD domain%3B Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2 gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1986 Toce_1987 Toce_1987 Toce_1987 2000170 2000937 - tRNA (adenine-58-N(1)-) methyltransferase COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase~InterPro IPR000682~KEGG: tpd:Teth39_1806 tRNA(1-methyladenosine) methyltransferase and related methyltransferase-like protein~PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase~PRIAM: tRNA (adenine-N(1)-)-methyltransferase~SPTR: tRNA(1-methyladenosine) methyltransferase and related methyltransferase-like protein%3B~PFAM: tRNA methyltransferase complex GCD14 subunit gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1987 Toce_1988 Toce_1988 Toce_1988 2000959 2001567 - molybdenum cofactor guanylyltransferase COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A~KEGG: mta:Moth_2174 molybdenum cofactor guanylyltransferase~SPTR: Molybdenum cofactor guanylyltransferase gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1988 Toce_1989 Toce_1989 Toce_1989 2001764 2003239 + transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1989 Toce_1990 Toce_1990 Toce_1990 2003291 2003539 - YKOF domain protein InterPro IPR011522~KEGG: mta:Moth_2201 hypothetical protein~PFAM: YKOF domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: YKOF-related Family gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1990 Toce_1991 Toce_1991 Toce_1991 2003552 2004274 - anaerobic ribonucleoside-triphosphate reductase activating protein COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR012840:IPR007197~KEGG: tpd:Teth39_0654 anaerobic ribonucleoside-triphosphate reductase activating protein~PFAM: Radical SAM domain protein~SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein%3B~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein~PFAM: Radical SAM superfamily~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1991 Toce_1992 Toce_1992 Toce_1992 2004231 2006321 - anaerobic ribonucleoside-triphosphate reductase COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase~InterPro IPR012833:IPR005144~KEGG: ate:Athe_0548 anaerobic ribonucleoside-triphosphate reductase~PFAM: ATP-cone domain protein~SPTR: Anaerobic ribonucleoside-triphosphate reductase%3B~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase~PFAM: ATP cone domain~TIGRFAM: anaerobic ribonucleoside-triphosphate reductase gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1992 Toce_1993 Toce_1993 Toce_1993 2006539 2007264 - hypothetical protein KEGG: amt:Amet_1498 copper amine oxidase domain-containing protein~SPTR: Copper amine oxidase domain protein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1993 Toce_1994 Toce_1994 Toce_1994 2007421 2007930 + 3H domain protein COGs: COG1827 small molecule binding protein (contains 3H domain)~InterPro IPR004173~KEGG: tpd:Teth39_1758 3H domain-containing protein~PFAM: 3H domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: HTH domain%3B 3H domain gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1994 Toce_1995 Toce_1995 Toce_1995 2007986 2009461 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1995 Toce_1996 Toce_1996 Toce_1996 2010395 2010886 + conserved hypothetical protein KEGG: tex:Teth514_0476 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1996 Toce_1997 Toce_1997 Toce_1997 2010914 2012089 - isoaspartyl dipeptidase COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase~InterPro IPR010229:IPR006680~KEGG: tit:Thit_0785 isoaspartyl dipeptidase~PFAM: amidohydrolase~SPTR: Isoaspartyl dipeptidase%3B~TIGRFAM: isoaspartyl dipeptidase~PFAM: Amidohydrolase family~TIGRFAM: isoaspartyl dipeptidase IadA gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1997 Toce_1998 Toce_1998 Toce_1998 2012093 2013739 - peptidase M20 COGs: COG4187 Arginine degradation protein (predicted deacylase)~InterPro IPR012166:IPR002933~KEGG: aoe:Clos_0189 peptidase M20~PFAM: peptidase M20~SPTR: Peptidase M20%3B~PFAM: Peptidase family M20/M25/M40 gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1998 Toce_1999 Toce_1999 Toce_1999 2013822 2014643 - zinc/iron permease COGs: COG0428 divalent heavy-metal cations transporter~InterPro IPR003689~KEGG: cdl:CDR20291_0946 zinc transporter~PFAM: zinc/iron permease~SPTR: Zinc transporter%3B~PFAM: ZIP Zinc transporter gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_1999 Toce_2000 Toce_2000 Toce_2000 2014870 2016288 + PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR003593:IPR002078:IPR020441:IPR 013656:IPR002197~KEGG: amt:Amet_2366 sigma-54 dependent trancsriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold-4 domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma54 specific transcriptional regulator%2C Fis family%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2000 Toce_2001 Toce_2001 Toce_2001 2016332 2017645 - cobalamin synthesis protein P47K COGs: COG2403 GTPase~InterPro IPR003495~KEGG: ton:TON_1432 hypothetical protein~PFAM: cobalamin synthesis protein P47K~SPTR: Putative uncharacterized protein%3B~PFAM: CobW/HypB/UreG%2C nucleotide-binding domain gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2001 Toce_2002 Toce_2002 Toce_2002 2017979 2018479 + hypothetical protein InterPro IPR020365~KEGG: dau:Daud_1896 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2002 Toce_2003 Toce_2003 Toce_2003 2018630 2019319 + two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: chy:CHY_2567 DNA-binding response regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: DNA-binding response regulator%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2003 Toce_2004 Toce_2004 Toce_2004 2019316 2020707 + integral membrane sensor signal transduction histidine kinase COGs: COG0642 Signal transduction histidine kinase~InterProIPR003660:IPR003661:IPR003594:IPR004358:IPR 005467~KEGG: swo:Swol_1680 sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~SPTR: Sensor protein%3B~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2004 Toce_2005 Toce_2005 Toce_2005 2021020 2021508 + conserved hypothetical protein KEGG: chy:CHY_0775 hypothetical protein~SPTR: Putative membrane protein%3B~PFAM: Protein of unknown function (DUF1393) gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2005 Toce_2006 Toce_2006 Toce_2006 2021489 2022235 + conserved hypothetical protein KEGG: hmo:HM1_1579 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2006 Toce_2007 Toce_2007 Toce_2007 2022236 2023120 - hypothetical protein KEGG: swo:Swol_2165 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2007 Toce_2008 Toce_2008 Toce_2008 2023177 2023599 - 3-hydroxyacyl-(acyl-carrier-protein) dehydratase COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase~InterPro IPR010084:IPR013114~KEGG: bha:BH3735 hydroxymyristoyl-(acyl carrier protein) dehydratase~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ~SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase%3B~TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: FabA-like domain~TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2008 Toce_2009 Toce_2009 Toce_2009 2023625 2023903 - Flagellar protein FlgJ COGs: COG3951 Rod binding protein~InterPro IPR000423:IPR019301~KEGG: tte:TTE0174 flagellum-specific muramidase~PFAM: Flagellar protein FlgJ-like~SPTR: Flagellum-specific muramidase%3B~PFAM: Rod binding protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2009 Toce_2010 Toce_2010 Toce_2010 2023917 2024723 - flagellar basal-body rod protein FlgG COGs: COG4786 Flagellar basal body rod protein~InterProIPR019776:IPR020013:IPR012834:IPR001444:IPR 010930~KEGG: aoe:Clos_2549 hypothetical protein~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: flagellar basal-body rod protein FlgG%3B fagellar hook-basal body protein~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgB%3B fagellar hook-basal body proteins%3B flagellar basal-body rod protein FlgG%2C Gram-negative bacteria gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2010 Toce_2011 Toce_2011 Toce_2011 2024806 2025588 - flagellar basal-body rod protein FlgF COGs: COG4786 Flagellar basal body rod protein~InterProIPR019776:IPR020013:IPR012836:IPR001444:IPR 010930~KEGG: tte:TTE0172 flagellar basal body and hook proteins~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~SPTR: Putative uncharacterized protein%3B~TIGRFAM: flagellar basal-body rod protein FlgF%3B fagellar hook-basal body protein~PFAM: Domain of unknown function (DUF1078)%3B Flagella basal body rod protein~TIGRFAM: flagellar basal-body rod protein FlgF%3B fagellar hook-basal body proteins gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2011 Toce_2012 Toce_2012 Toce_2012 2025610 2026608 - rod shape-determining protein MreB COGs: COG1077 Actin-like ATPase involved in cell morphogenesis~InterPro IPR004753~KEGG: cth:Cthe_2619 rod shape-determining protein Mbl~PFAM: cell shape determining protein MreB/Mrl~SPTR: Cell shape determining protein%2C MreB/Mrl family%3B~TIGRFAM: cell shape determining protein%2C MreB/Mrl family~PFAM: MreB/Mbl protein~TIGRFAM: cell shape determining protein%2C MreB/Mrl family gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2012 Toce_2013 Toce_2013 Toce_2013 2026695 2026937 - sporulation transcriptional regulator SpoIIID InterPro IPR018356:IPR014208~KEGG: hor:Hore_17740 sporulation stage III transcriptional regulator SpoIIID~SPTR: Sporulation stage III transcriptional regulator SpoIIID%3B~TIGRFAM: sporulation transcriptional regulator SpoIIID~PFAM: Stage III sporulation protein D~TIGRFAM: sporulation transcriptional regulator SpoIIID gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2013 Toce_2014 Toce_2014 Toce_2014 2027063 2027881 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: cth:Cthe_2617 peptidase M23B~PFAM: Peptidase M23~SPTR: Peptidase M23B%3B~PFAM: Peptidase family M23 gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2014 Toce_2015 Toce_2015 Toce_2015 2028061 2029068 - stage II sporulation protein D COGs: COG2385 Sporulation protein and related protein~InterPro IPR014225:IPR013486:IPR013693~KEGG: tpd:Teth39_2097 SpoIID/LytB domain-containing protein~PFAM: Stage II sporulation D domain protein~SPTR: SpoIID/LytB domain%3B~TIGRFAM: stage II sporulation protein D%3B SpoIID/LytB domain protein~PFAM: Stage II sporulation protein~TIGRFAM: SpoIID/LytB domain%3B stage II sporulation protein D gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2015 Toce_2016 Toce_2016 Toce_2016 2029145 2030395 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase~InterPro IPR005750:IPR001986:IPR012514~KEGG: aoe:Clos_2555 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)%3B Formaecin~SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase%3B~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2016 Toce_2017 Toce_2017 Toce_2017 2030416 2031204 - Protein of unknown function DUF1779 InterPro IPR014794~KEGG: tpd:Teth39_2101 hypothetical protein~PFAM: Protein of unknown function DUF1779~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1779) gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2017 Toce_2018 Toce_2018 Toce_2018 2031214 2031468 - ATPase%2C F1 complex%2C delta/epsilon subunit InterPro IPR020546~KEGG: ddf:DEFDS_1885 F0F1-type ATP synthase subunit epsilon~PFAM: ATPase%2C F1 complex%2C delta/epsilon subunit-like~SPTR: F0F1-type ATP synthase%2C epsilon subunit%3B~PFAM: ATP synthase%2C Delta/Epsilon chain%2C beta-sandwich domain gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2018 Toce_2019 Toce_2019 Toce_2019 2031465 2032934 - ATP synthase F1 subcomplex beta subunit COGs: COG0055 F0F1-type ATP synthase beta subunit~InterProIPR003593:IPR020003:IPR005722:IPR004100:IPR 000194:IPR000793~KEGG: hor:Hore_17800 ATP synthase F1%2C beta subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase~SPTR: ATP synthase F1%2C beta subunit%3B~TIGRFAM: ATP synthase F1%2C beta subunit~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATP synthase%2C F1 beta subunit gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2019 Toce_2020 Toce_2020 Toce_2020 2032956 2033765 - ATP synthase F1%2C gamma subunit COGs: COG0224 F0F1-type ATP synthase gamma subunit~InterPro IPR000131~KEGG: chy:CHY_2546 F0F1 ATP synthase subunit gamma~PFAM: H+transporting two-sector ATPase gamma subunit~SPTR: ATP synthase gamma chain%3B~TIGRFAM: ATP synthase F1%2C gamma subunit~PFAM: ATP synthase~TIGRFAM: ATP synthase%2C F1 gamma subunit gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2020 Toce_2021 Toce_2021 Toce_2021 2033781 2035367 - ATP synthase F1 subcomplex alpha subunit COGs: COG0056 F0F1-type ATP synthase alpha subunit~InterProIPR020003:IPR005294:IPR004100:IPR000194:IPR 000793~KEGG: mta:Moth_2380 ATP synthase F1%2C alpha subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SPTR: ATP synthase subunit alpha%3B~TIGRFAM: ATP synthase F1%2C alpha subunit~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: proton translocating ATP synthase%2C F1 alpha subunit gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2021 Toce_2022 Toce_2022 Toce_2022 2035373 2035903 - ATP synthase F1%2C delta subunit COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein)~InterPro IPR020781:IPR000711~KEGG: ckr:CKR_3256 hypothetical protein~PFAM: H+transporting two-sector ATPase delta (OSCP) subunit~SPTR: ATP synthase subunit delta%3B~TIGRFAM: ATP synthase F1%2C delta subunit~PFAM: ATP synthase delta (OSCP) subunit~TIGRFAM: ATP synthase%2C F1 delta subunit gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2022 Toce_2023 Toce_2023 Toce_2023 2035891 2036385 - ATP synthase F0%2C B subunit COGs: COG0711 F0F1-type ATP synthase subunit b~InterPro IPR005864:IPR002146~KEGG: nth:Nther_2848 ATP synthase F0%2C B subunit~PFAM: H+transporting two-sector ATPase B/B' subunit~SPTR: ATP synthase subunit b%3B~TIGRFAM: ATP synthase F0%2C B subunit~PFAM: ATP synthase B/B' CF(0)~TIGRFAM: ATP synthase%2C F0 subunit b gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2023 Toce_2024 Toce_2024 Toce_2024 2036410 2036676 - ATP synthase F0 subcomplex C subunit InterPro IPR020537:IPR000454:IPR005953:IPR002379~KEGG: aoe:Clos_2565 F0F1 ATP synthase subunit C~PFAM: H+transporting two-sector ATPase C subunit~SPTR: ATP synthase subunit c%3B~TIGRFAM: ATP synthase F0%2C C subunit~PFAM: ATP synthase subunit C~TIGRFAM: ATP synthase%2C F0 subunit c gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2024 Toce_2025 Toce_2025 Toce_2025 2036698 2037354 - ATP synthase F0%2C A subunit COGs: COG0356 F0F1-type ATP synthase subunit a~InterPro IPR000568~KEGG: nth:Nther_2851 ATP synthase F0%2C A subunit~PFAM: H+transporting two-sector ATPase A subunit~SPTR: ATP synthase subunit a%3B~TIGRFAM: ATP synthase F0%2C A subunit~PFAM: ATP synthase A chain~TIGRFAM: ATP synthase subunit 6 (eukaryotes)%2Calso subunit A (prokaryotes) gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2025 Toce_2026 Toce_2026 Toce_2026 2037333 2037722 - hypothetical protein KEGG: aoe:Clos_2567 ATP synthase protein I~SPTR: ATP synthase protein I gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2026 Toce_2027 Toce_2027 Toce_2027 2037878 2039242 - dihydrolipoamide dehydrogenase COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3)~InterProIPR012999:IPR013027:IPR000815:IPR006258:IPR 004099~KEGG: tex:Teth514_2038 dihydrolipoamide dehydrogenase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerisation region~SPTR: Dihydrolipoyl dehydrogenase%3B~TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: Pyridine nucleotide-disulphide oxidoreductase%3B Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain~TIGRFAM: dihydrolipoamide dehydrogenase gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2027 Toce_2028 Toce_2028 Toce_2028 2039297 2040511 - catalytic domain of components of various dehydrogenase complexes COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein~InterPro IPR003016:IPR000089:IPR004167:IPR001078~KEGG: tex:Teth514_2030 dehydrogenase catalytic domain-containing protein~PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain-containing protein%3B E3 binding domain protein~SPTR: Catalytic domain of components of various dehydrogenase complexes%3B~PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)%3B e3 binding domain%3B Biotin-requiring enzyme~TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase%2C long form gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2028 Toce_2029 Toce_2029 Toce_2029 2040511 2041509 - ATP-NAD/AcoX kinase COGs: COG3199 conserved hypothetical protein~InterPro IPR011391:IPR002504~KEGG: tpd:Teth39_0792 ATP-NAD/AcoX kinase~PFAM: ATP-NAD/AcoX kinase~SPTR: ATP-NAD/AcoX kinase%3B~PFAM: ATP-NAD kinase gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2029 Toce_2030 Toce_2030 Toce_2030 2041563 2042534 - Transketolase central region COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit~InterPro IPR005475:IPR005476~KEGG: tex:Teth514_2032 transketolase%2C central region~PFAM: Transketolase central region%3B Transketolase domain protein~SPTR: Transketolase%2C pyridine binding domain protein%3B~PFAM: Transketolase%2C C-terminal domain%3B Transketolase%2C pyrimidine binding domain gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2030 Toce_2031 Toce_2031 Toce_2031 2042531 2043517 - pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit~InterPro IPR017597:IPR001017~KEGG: tex:Teth514_2033 pyruvate dehydrogenase (acetyl-transferring)~PFAM: dehydrogenase E1 component~PRIAM: Pyruvate dehydrogenase (acetyl-transferring)~SPTR: Pyruvate dehydrogenase E1 component%2C alpha subunit%3B~TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit~PFAM: Dehydrogenase E1 component~TIGRFAM: pyruvate dehydrogenase E1 component%2C alpha subunit gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2031 Toce_2032 Toce_2032 Toce_2032 2043534 2043923 - conserved hypothetical protein InterPro IPR011719~KEGG: tpd:Teth39_0789 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Conserved hypothetical protein (Lin0512_fam)~TIGRFAM: conserved hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2032 Toce_2033 Toce_2033 Toce_2033 2044106 2046070 - GAF modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism~InterProIPR000014:IPR003593:IPR002078:IPR020441:IPR 003018:IPR013767:IPR002197~KEGG: tex:Teth514_2035 fis family GAF modulated sigma54 specific transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B GAF domain protein%3B PAS fold domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: GAF modulated sigma54 specific transcriptional regulator%2C Fis family%3B~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2033 Toce_2034 Toce_2034 Toce_2034 2046267 2046996 - pseudogene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2034 Toce_2035 Toce_2035 Toce_2035 2047027 2048214 - pseudogene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2035 Toce_2036 Toce_2036 Toce_2036 2048380 2049252 - Integrase catalytic region COGs: COG2801 Transposase and inactivated derivatives~InterPro IPR001584~KEGG: cdl:CDR20291_1072 integrase%2C catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase%2C catalytic region%3B~PFAM: Integrase core domain gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2036 Toce_2037 Toce_2037 Toce_2037 2049291 2049974 - pseudogene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2037 Toce_2038 Toce_2038 Toce_2038 2050124 2050525 - hypothetical protein KEGG: pyo:PY04099 hypothetical protein~SPTR: Predicted protein gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2038 Toce_2039 Toce_2039 Toce_2039 2050552 2051538 - conserved hypothetical protein KEGG: mac:MA1284 hypothetical protein~SPTR: Predicted protein gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2039 Toce_2040 Toce_2040 Toce_2040 2051974 2052600 - V-type ATPase%2C D subunit COGs: COG1394 H+-ATPase subunit D~InterPro IPR002699~KEGG: tit:Thit_2331 V-type ATPase%2C D subunit~PFAM: H+transporting two-sector ATPase D subunit~SPTR: V-type ATPase%2C D subunit%3B~TIGRFAM: V-type ATPase%2C D subunit~PFAM: ATP synthase subunit D~TIGRFAM: H(+)-transporting ATP synthase%2C vacuolar type%2C subunit D gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2040 Toce_2041 Toce_2041 Toce_2041 2052603 2053985 - H+transporting two-sector ATPase alpha/beta subunit central region COGs: COG1156 H+-ATPase subunit B~InterPro IPR020003:IPR004100:IPR000194:IPR000793~KEGG: tex:Teth514_2363 V-type ATP synthase subunit B~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SPTR: H+transporting two-sector ATPase alpha/beta subunit central region%3B~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATP synthase archaeal%2C B subunit gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2041 Toce_2042 Toce_2042 Toce_2042 2053978 2055750 - ATP synthase%2C A subunit COGs: COG1155 H+-ATPase subunit A~InterProIPR003593:IPR020003:IPR005726:IPR004100:IPR 000194:IPR000793~KEGG: tit:Thit_2333 ATP synthase%2C A subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase~SPTR: ATP synthase%2C A subunit%3B~TIGRFAM: ATP synthase%2C A subunit~PFAM: ATP synthase alpha/beta family%2C beta-barrel domain%3B ATP synthase alpha/beta chain%2C C terminal domain%3B ATP synthase alpha/beta family%2C nucleotide-binding domain~TIGRFAM: ATP synthase archaeal%2C A subunit gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2042 Toce_2043 Toce_2043 Toce_2043 2055747 2056076 - Vacuolar H+transporting two-sector ATPase F subunit COGs: COG1436 H+-ATPase subunit F~InterPro IPR008218~KEGG: tit:Thit_2334 vacuolar H+transporting two-sector ATPase F subunit~PFAM: Vacuolar H+transporting two-sector ATPase F subunit~SPTR: Vacuolar H+transporting two-sector ATPase F subunit%3B~PFAM: ATP synthase (F/14-kDa) subunit gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2043 Toce_2044 Toce_2044 Toce_2044 2056069 2057073 - H+transporting two-sector ATPase C (AC39) subunit COGs: COG1527 H+-ATPase subunit C~InterPro IPR002843~KEGG: tpd:Teth39_2261 V-type ATP synthase subunit C~PFAM: H+transporting two-sector ATPase C (AC39) subunit~SPTR: H(+)-transporting two-sector ATPase%3B~PFAM: ATP synthase (C/AC39) subunit gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2044 Toce_2045 Toce_2045 Toce_2045 2057079 2057681 - H+transporting two-sector ATPase E subunit InterPro IPR002842~KEGG: tex:Teth514_2367 H+-transporting two-sector ATPase%2C E subunit~PFAM: H+transporting two-sector ATPase E subunit~SPTR: H+transporting two-sector ATPase E subunit%3B~PFAM: ATP synthase (E/31 kDa) subunit gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2045 Toce_2046 Toce_2046 Toce_2046 2057694 2058176 - H+transporting two-sector ATPase C subunit InterPro IPR002379~KEGG: tit:Thit_2337 H+transporting two-sector ATPase C subunit~PFAM: H+transporting two-sector ATPase C subunit~SPTR: H+-transporting two-sector ATPase%2C C subunit%3B~PFAM: ATP synthase subunit C gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2046 Toce_2047 Toce_2047 Toce_2047 2058228 2060159 - V-type ATPase 116 kDa subunit COGs: COG1269 H+-ATPase subunit I~InterPro IPR002490~KEGG: tit:Thit_2338 V-type ATPase 116 kDa subunit~PFAM: V-type ATPase 116 kDa subunit~SPTR: H(+)-transporting two-sector ATPase%3B~PFAM: V-type ATPase 116kDa subunit family gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2047 Toce_2048 Toce_2048 Toce_2048 2060146 2060469 - conserved hypothetical protein KEGG: tit:Thit_2339 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Vacuolar (H+)-ATPase G subunit~TIGRFAM: ATP synthase archaeal%2C H subunit gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2048 Toce_2049 Toce_2049 Toce_2049 2060971 2062080 - hypothetical protein KEGG: cth:Cthe_2522 membrane associated protein~SPTR: Putative uncharacterized protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2049 Toce_2050 Toce_2050 Toce_2050 2062085 2062789 - RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG subfamily COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit~InterPro IPR014244:IPR014284:IPR007627~KEGG: cth:Cthe_2521 putative RNA polymerase sigma factor SigI~PFAM: sigma-70 region 2 domain protein~SPTR: RNA polymerase%2C sigma 28 subunit%2C SigI%3B~TIGRFAM: RNA polymerase sigma-I factor%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 2~TIGRFAM: RNA polymerase sigma-I factor%3B RNA polymerase sigma factor%2C sigma-70 family gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2050 Toce_2051 Toce_2051 Toce_2051 2062905 2064380 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2051 Toce_2052 Toce_2052 Toce_2052 2064509 2065738 - uracil-xanthine permease COGs: COG2233 Xanthine/uracil permease~InterPro IPR013838:IPR006042:IPR006043~KEGG: tpd:Teth39_2266 uracil-xanthine permease~PFAM: Xanthine/uracil/vitamin C permease~SPTR: Uracil-xanthine permease%3B~TIGRFAM: uracil-xanthine permease~PFAM: Permease family~TIGRFAM: uracil-xanthine permease gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2052 Toce_2053 Toce_2053 Toce_2053 2066323 2066811 + pseudogene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2053 Toce_2054 Toce_2054 Toce_2054 2066798 2067052 + hypothetical protein KEGG: cbr:CBG00233 C. briggsae CBR-TWK-18 protein~SPTR: Predicted protein gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2054 Toce_2055 Toce_2055 Toce_2055 2067458 2067907 - hypothetical protein KEGG: tit:Thit_0394 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2055 Toce_2056 Toce_2056 Toce_2056 2067934 2068086 - pseudogene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2056 Toce_2057 Toce_2057 Toce_2057 2068088 2068765 - carbon starvation protein CstA COGs: COG1966 Carbon starvation protein predicted membrane protein~InterPro IPR003706~KEGG: psl:Psta_2873 carbon starvation protein CstA~PFAM: carbon starvation protein CstA~SPTR: Carbon starvation protein CstA%3B~PFAM: Carbon starvation protein CstA gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2057 Toce_2058 Toce_2058 Toce_2058 2069197 2069928 - IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2058 Toce_2059 Toce_2059 Toce_2059 2069922 2071445 - Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR001584:IPR017894~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2059 Toce_2060 Toce_2060 Toce_2060 2071779 2072255 + conserved hypothetical protein KEGG: amt:Amet_2107 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2060 Toce_2061 Toce_2061 Toce_2061 2072393 2073550 - UDP-N-Acetylglucosamine 2-epimerase COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase~InterPro IPR003331~KEGG: cth:Cthe_2601 UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~PRIAM: UDP-N-acetylglucosamine 2-epimerase~SPTR: UDP-N-acetylglucosamine 2-epimerase%3B~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase~PFAM: UDP-N-acetylglucosamine 2-epimerase~TIGRFAM: UDP-N-acetylglucosamine 2-epimerase gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2061 Toce_2062 Toce_2062 Toce_2062 2073577 2074608 - pseudogene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2062 Toce_2063 Toce_2063 Toce_2063 2074672 2075130 - CMP/dCMP deaminase zinc-binding protein COGs: COG2131 Deoxycytidylate deaminase~InterPro IPR013838:IPR016192:IPR016473:IPR002125~KEGG: pth:PTH_2823 deoxycytidylate deaminase~PFAM: CMP/dCMP deaminase zinc-binding~SPTR: Deoxycytidylate deaminase%3B~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2063 Toce_2064 Toce_2064 Toce_2064 2075127 2075807 - uracil phosphoribosyltransferase COGs: COG0035 Uracil phosphoribosyltransferase~InterPro IPR005765:IPR000836~KEGG: ate:Athe_0633 uracil phosphoribosyltransferase~PFAM: phosphoribosyltransferase~SPTR: Uracil phosphoribosyltransferase%3B~TIGRFAM: uracil phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: uracil phosphoribosyltransferase gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2064 Toce_2065 Toce_2065 Toce_2065 2075771 2077015 - serine hydroxymethyltransferase COGs: COG0112 Glycine/serine hydroxymethyltransferase~InterPro IPR019798:IPR001085~KEGG: glycine hydroxymethyltransferase~PFAM: glycine hydroxymethyltransferase~PRIAM: Glycine hydroxymethyltransferase~SPTR: Serine hydroxymethyltransferase%3B~PFAM: Serine hydroxymethyltransferase gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2065 Toce_2066 Toce_2066 Toce_2066 2077033 2077473 - ribose-5-phosphate isomerase COGs: COG0698 Ribose 5-phosphate isomerase RpiB~InterPro IPR004785:IPR003500~KEGG: gyc:GYMC61_3427 sugar-phosphate isomerase%2C RpiB/LacA/LacB family~PFAM: Ribose/galactose isomerase~PRIAM: Ribose-5-phosphate isomerase~SPTR: Ribose 5-phosphate isomerase%3B~TIGRFAM: sugar-phosphate isomerase%2C RpiB/LacA/LacB family%3B ribose 5-phosphate isomerase B~PFAM: Ribose/Galactose Isomerase~TIGRFAM: ribose 5-phosphate isomerase B%3B ribose 5-phosphate isomerase%3B sugar-phosphate isomerases%2C RpiB/LacA/LacB family gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2066 Toce_2067 Toce_2067 Toce_2067 2077522 2077998 - protein tyrosine phosphatase COGs: COG0394 Protein-tyrosine-phosphatase~InterPro IPR017867:IPR000106~KEGG: dae:Dtox_4179 protein tyrosine phosphatase~PFAM: Protein-tyrosine phosphatase%2C low molecular weight~SMART: Protein-tyrosine phosphatase%2C low molecular weight~SPTR: Protein tyrosine phosphatase%3B~PFAM: Low molecular weight phosphotyrosine protein phosphatase gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2067 Toce_2068 Toce_2068 Toce_2068 2078020 2079051 - translation factor SUA5 COGs: COG0009 Putative translation factor (SUA5)~InterPro IPR004388:IPR010923:IPR006070:IPR005145~KEGG: tte:TTE0145 putative translation factor (SUA5)~PFAM: SUA5/yciO/yrdC domain%3B SUA5 domain protein~SPTR: Putative translation factor (Sua5)%3B~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: yrdC domain%3B SUA5 domain~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2068 Toce_2069 Toce_2069 Toce_2069 2079082 2079600 - Chromate transporter COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370~KEGG: tex:Teth514_2360 chromate transporter~PFAM: Chromate transporter~SPTR: Chromate transporter%3B~PFAM: Chromate transporter gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2069 Toce_2070 Toce_2070 Toce_2070 2079597 2080175 - Chromate transporter COGs: COG2059 Chromate transport protein ChrA~InterPro IPR003370~KEGG: tit:Thit_2330 chromate transporter~PFAM: Chromate transporter~SPTR: Chromate transporter%3B~manually curated~PFAM: Chromate transporter gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2070 Toce_2071 Toce_2071 Toce_2071 2080168 2081040 - protein-(glutamine-N5) methyltransferase%2C release factor-specific COGs: COG2890 Methylase of polypeptide chain release factors~InterPro IPR002052:IPR004556:IPR019874:IPR007848~KEGG: pth:PTH_2829 methylase of polypeptide chain release factors~PFAM: methyltransferase small~PRIAM: Site-specific DNA-methyltransferase (adenine-specific)~SPTR: Methylase of polypeptide chain release factors%3B~TIGRFAM: protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B modification methylase%2C HemK family~PFAM: Methyltransferase small domain~TIGRFAM: HemK family putative methylases%3B protein-(glutamine-N5) methyltransferase%2C release factor-specific gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2071 Toce_2072 Toce_2072 Toce_2072 2081037 2082131 - bacterial peptide chain release factor 1 (bRF-1) COGs: COG0216 Protein chain release factor A~InterPro IPR000352:IPR004373:IPR005139~KEGG: tte:TTE0143 peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein~SPTR: Peptide chain release factor 1%3B~TIGRFAM: peptide chain release factor 1~PFAM: PCRF domain%3B RF-1 domain~TIGRFAM: peptide chain release factor 1 gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2072 Toce_2073 Toce_2073 Toce_2073 2082121 2082996 - protein of unknown function DUF1385 COGs: COG3872 metal-dependent protein~InterPro IPR010787~KEGG: nth:Nther_2873 protein of unknown function DUF1385~PFAM: protein of unknown function DUF1385~SPTR: Putative lipoprotein%3B~PFAM: Protein of unknown function (DUF1385) gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2073 Toce_2074 Toce_2074 Toce_2074 2083056 2083265 - LSU ribosomal protein L31P COGs: COG0254 Ribosomal protein L31~InterPro IPR002150~KEGG: cce:Ccel_3375 ribosomal protein L31~PFAM: ribosomal protein L31~SPTR: 50S ribosomal protein L31%3B~TIGRFAM: ribosomal protein L31~PFAM: Ribosomal protein L31~TIGRFAM: ribosomal protein L31 gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2074 Toce_2075 Toce_2075 Toce_2075 2083408 2084580 - cation diffusion facilitator family transporter COGs: COG0053 Co/Zn/Cd cation transporter~InterPro IPR002524~KEGG: cno:NT01CX_1345 cation efflux family protein%2C putative~PFAM: cation efflux protein~SPTR: Cation efflux family protein%2C putative%3B~TIGRFAM: cation diffusion facilitator family transporter~PFAM: Cation efflux family~TIGRFAM: cation diffusion facilitator family transporter gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2075 Toce_2076 Toce_2076 Toce_2076 2084577 2085083 - GCN5-related N-acetyltransferase InterPro IPR000182~KEGG: chy:CHY_1870 acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: Putative uncharacterized protein%3B~PFAM: Acetyltransferase (GNAT) family gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2076 Toce_2077 Toce_2077 Toce_2077 2085175 2086188 - Radical SAM domain protein COGs: COG1180 Pyruvate-formate lyase-activating enzyme~InterPro IPR006638:IPR016431:IPR007197~KEGG: tit:Thit_1756 radical SAM domain protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2077 Toce_2078 Toce_2078 Toce_2078 2086210 2087607 - AMMECR1 domain protein COGs: COG3885 conserved hypothetical protein~InterPro IPR002733:IPR004183~KEGG: tpd:Teth39_0581 hypothetical protein~PFAM: AMMECR1 domain protein%3B Extradiol ring-cleavage dioxygenase class III protein subunit B~SPTR: AMMECR1 domain protein%3B~PFAM: AMMECR1%3B Catalytic LigB subunit of aromatic ring-opening dioxygenase~TIGRFAM: conserved hypothetical protein TIGR00296 gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2078 Toce_2079 Toce_2079 Toce_2079 2087826 2088920 - Shikimate/quinate 5-dehydrogenase COGs: COG5322 dehydrogenase~InterPro IPR006151~KEGG: tit:Thit_2042 shikimate/quinate 5-dehydrogenase~PFAM: Shikimate/quinate 5-dehydrogenase~SPTR: Shikimate/quinate 5-dehydrogenase%3B~PFAM: Shikimate / quinate 5-dehydrogenase gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2079 Toce_2080 Toce_2080 Toce_2080 2088941 2089843 - conserved hypothetical protein KEGG: tte:TTE2375 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2080 Toce_2081 Toce_2081 Toce_2081 2089851 2090378 - helix-turn-helix domain protein InterPro IPR001387~KEGG: mta:Moth_0148 putative transcriptional regulator~PFAM: helix-turn-helix domain protein~SPTR: Putative uncharacterized protein%3B~PFAM: Helix-turn-helix gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2081 Toce_2082 Toce_2082 Toce_2082 2090464 2091426 - hypothetical protein KEGG: sme:SMa1718 AdeC4 adenine deaminase~SPTR: Putative uncharacterized protein gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2082 Toce_2083 Toce_2083 Toce_2083 2091427 2092449 - tRNA-U20-dihydrouridine synthase COGs: COG0042 tRNA-dihydrouridine synthase~InterPro IPR018517:IPR004652:IPR001269~KEGG: amt:Amet_4527 nifR3 family TIM-barrel protein~PFAM: dihydrouridine synthase DuS~SPTR: TIM-barrel protein%3B~TIGRFAM: TIM-barrel protein%2C nifR3 family~PFAM: Dihydrouridine synthase (Dus)~TIGRFAM: putative TIM-barrel protein%2C nifR3 family gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2083 Toce_2084 Toce_2084 Toce_2084 2092424 2093200 - pantothenate kinase COGs: COG1521 Putative transcriptional regulator protein~InterPro IPR004619~KEGG: pth:PTH_0258 pantothenate kinase~PFAM: Bvg accessory factor~PRIAM: Pantothenate kinase~SPTR: Putative transcriptional acitvator%2C Baf family%3B~TIGRFAM: transcriptional activator%2C Baf family~PFAM: Bordetella pertussis Bvg accessory factor family~TIGRFAM: pantothenate kinase%2C type III gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2084 Toce_2085 Toce_2085 Toce_2085 2093206 2093727 - membrane protein-like protein COGs: COG4684 membrane protein~KEGG: tpd:Teth39_0308 membrane protein-like protein~SPTR: Membrane protein-like protein gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2085 Toce_2086 Toce_2086 Toce_2086 2093985 2094413 - Rubrerythrin COGs: COG1592 Rubrerythrin~InterPro IPR003251:IPR009040~KEGG: amt:Amet_0750 rubrerythrin~PFAM: Rubrerythrin~SPTR: Rubrerythrin%3B~PFAM: Rubrerythrin gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2086 Toce_2087 Toce_2087 Toce_2087 2094732 2095955 + transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: pth:PTH_2606 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Hypothetical transposase%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2087 Toce_2088 Toce_2088 Toce_2088 2096038 2096499 - conserved hypothetical protein KEGG: amt:Amet_0749 hypothetical protein~SPTR: Putative uncharacterized protein%3B~manually curated gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2088 Toce_2089 Toce_2089 Toce_2089 2096866 2097150 - hypothetical protein KEGG: btr:Btr_1147 permease protein of ABC transporter~SPTR: Permease protein of ABC transporter gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2089 Toce_2090 Toce_2090 Toce_2090 2097225 2097365 - hypothetical protein KEGG: smb:smi_0973 multi-drug resistance efflux pump~SPTR: MFS family major facilitator transporter%2C multidrug:cation symporter gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2090 Toce_2091 Toce_2091 Toce_2091 2097362 2097986 - pseudogene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2091 Toce_2092 Toce_2092 Toce_2092 2098358 2099407 + glyceraldehyde-3-phosphate dehydrogenase COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase~InterProIPR020830:IPR020832:IPR006424:IPR020831:IPR 020828:IPR020829~KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain~PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)~SPTR: Glyceraldehyde-3-phosphate dehydrogenase%2C type I%3B~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2092 Toce_2093 Toce_2093 Toce_2093 2099510 2099818 - transcriptional regulator%2C ArsR family InterPro IPR001845~KEGG: bwe:BcerKBAB4_2205 ArsR family transcriptional regulator~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~SPTR: Putative transcriptional regulator%3B~PFAM: Bacterial regulatory protein%2C arsR family gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2093 Toce_2094 Toce_2094 Toce_2094 2099815 2101191 - Radical SAM domain protein COGs: COG0535 Fe-S oxidoreductase~InterPro IPR006638:IPR007197~KEGG: mta:Moth_1786 radical SAM family protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM%3B~PFAM: Radical SAM superfamily gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2094 Toce_2095 Toce_2095 Toce_2095 2101282 2101731 - protein of unknown function DUF606 COGs: COG3238 conserved hypothetical protein~InterPro IPR006750~KEGG: hor:Hore_20760 hypothetical protein~PFAM: protein of unknown function DUF606~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function%2C DUF606 gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2095 Toce_2096 Toce_2096 Toce_2096 2101887 2103686 - membrane protease FtsH catalytic subunit COGs: COG0465 ATP-dependent Zn protease~InterProIPR003593:IPR003960:IPR005936:IPR003959:IPR 000642~KEGG: tpd:Teth39_0301 ATP-dependent metalloprotease FtsH~PFAM: peptidase M41%3B AAA ATPase central domain protein~PRIAM: Microtubule-severing ATPase~SMART: AAA ATPase~SPTR: ATP-dependent metalloprotease FtsH%3B~TIGRFAM: ATP-dependent metalloprotease FtsH~PFAM: FtsH Extracellular%3B Peptidase family M41%3B ATPase family associated with various cellular activities (AAA)~TIGRFAM: ATP-dependent metalloprotease FtsH gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2096 Toce_2097 Toce_2097 Toce_2097 2103784 2104341 - hypoxanthine phosphoribosyltransferase COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase~InterPro IPR005904:IPR000836~KEGG: tte:TTE2394 hypoxanthine-guanine phosphoribosyltransferase~PFAM: phosphoribosyltransferase~PRIAM: Hypoxanthine phosphoribosyltransferase~SPTR: Hypoxanthine phosphoribosyltransferase%3B~TIGRFAM: hypoxanthine phosphoribosyltransferase~PFAM: Phosphoribosyl transferase domain~TIGRFAM: hypoxanthine phosphoribosyltransferase gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2097 Toce_2098 Toce_2098 Toce_2098 2104335 2105750 - tRNA(Ile)-lysidine synthetase COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control~InterPro IPR012795:IPR012796:IPR011063~KEGG: amt:Amet_4544 tRNA(Ile)-lysidine synthetase~PFAM: PP-loop domain protein~SPTR: tRNA(Ile)-lysidine synthetase%3B~TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: TilS substrate C-terminal domain%3B PP-loop family~TIGRFAM: tRNA(Ile)-lysidine synthetase%2C C-terminal domain%3B tRNA(Ile)-lysidine synthetase%2C N-terminal domain gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2098 Toce_2099 Toce_2099 Toce_2099 2105891 2108215 - protein serine/threonine phosphatase COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit~InterPro IPR001932:IPR006162:IPR014221:IPR010822~KEGG: cce:Ccel_2986 stage II sporulation protein E%2C protein serine/threonine phosphatase~PFAM: Stage II sporulation E family protein~PRIAM: Phosphoprotein phosphatase~SMART: protein phosphatase 2C domain protein~SPTR: Stage II sporulation protein E%2C protein serine/threonine phosphatase%3B~TIGRFAM: stage II sporulation protein E~manually curated~PFAM: Stage II sporulation protein E (SpoIIE)~TIGRFAM: stage II sporulation protein E gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2099 Toce_2100 Toce_2100 Toce_2100 2108716 2109093 - LSU ribosomal protein L12P COGs: COG0222 Ribosomal protein L7/L12~InterPro IPR000206:IPR013823~KEGG: aac:Aaci_2721 ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12~SPTR: Ribosomal protein L7/L12%3B~TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12 C-terminal domain~TIGRFAM: ribosomal protein L7/L12 gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2100 Toce_2101 Toce_2101 Toce_2101 2109236 2109754 - LSU ribosomal protein L10P COGs: COG0244 Ribosomal protein L10~InterPro IPR002363:IPR001790~KEGG: hor:Hore_01070 ribosomal protein L10~PFAM: ribosomal protein L10~SPTR: 50S ribosomal protein L10%3B~PFAM: Ribosomal protein L10 gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2101 Toce_2102 Toce_2102 Toce_2102 2109940 2110641 - LSU ribosomal protein L1P COGs: COG0081 Ribosomal protein L1~InterPro IPR002143:IPR005878~KEGG: tpd:Teth39_0363 50S ribosomal protein L1~PFAM: ribosomal protein L1~SPTR: Ribosomal protein L1%3B~TIGRFAM: ribosomal protein L1~PFAM: Ribosomal protein L1p/L10e family~TIGRFAM: ribosomal protein L1%2C bacterial/chloroplast gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2102 Toce_2103 Toce_2103 Toce_2103 2110706 2111131 - LSU ribosomal protein L11P COGs: COG0080 Ribosomal protein L11~InterProIPR000911:IPR020785:IPR006519:IPR020784:IPR 020783~KEGG: chy:CHY_2323 50S ribosomal protein L11~PFAM: Ribosomal protein L11-like~SMART: ribosomal protein L11~SPTR: 50S ribosomal protein L11%3B~TIGRFAM: ribosomal protein L11~PFAM: Ribosomal protein L11%2C RNA binding domain%3B Ribosomal protein L11%2C N-terminal domain~TIGRFAM: 50S ribosomal protein L11 gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2103 Toce_2104 Toce_2104 Toce_2104 2111153 2111677 - transcription antitermination protein nusG COGs: COG0250 Transcription antiterminator~InterPro IPR006645:IPR005824:IPR015869:IPR001062~KEGG: drm:Dred_0202 NusG antitermination factor~PFAM: NGN domain protein%3B KOW domain protein~SMART: NGN domain protein%3B KOW domain protein~SPTR: Transcription antitermination protein nusG%3B~TIGRFAM: transcription termination/antitermination factor NusG~PFAM: Transcription termination factor nusG%3B KOW motif~TIGRFAM: transcription termination/antitermination factor NusG gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2104 Toce_2105 Toce_2105 Toce_2105 2111709 2111915 - preprotein translocase%2C SecE subunit InterPro IPR001901:IPR005807~KEGG: tte:TTE2308 preprotein translocase subunit SecE~PFAM: protein secE/sec61-gamma protein~SPTR: Preprotein translocase subunit SecE%3B~TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: SecE/Sec61-gamma subunits of protein translocation complex~TIGRFAM: preprotein translocase%2C SecE subunit%2C bacterial gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2105 Toce_2106 Toce_2106 Toce_2106 2111951 2112100 - LSU ribosomal protein L33P InterPro IPR018264:IPR001705~KEGG: tit:Thit_1990 ribosomal protein L33~PFAM: ribosomal protein L33~SPTR: Ribosomal protein L33%3B~TIGRFAM: ribosomal protein L33~PFAM: Ribosomal protein L33~TIGRFAM: ribosomal protein L33%2C bacterial type gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2106 Toce_2107 Toce_2107 Toce_2107 2112242 2113444 - translation elongation factor 1A (EF-1A/EF-Tu) COGs: COG0050 GTPase - translation elongation factors~InterProIPR000795:IPR004541:IPR005225:IPR004161:IPR 004160~KEGG: mta:Moth_2462 elongation factor Tu~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain protein~SPTR: Elongation factor Tu%3B~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor Tu C-terminal domain%3B Elongation factor Tu GTP binding domain~TIGRFAM: small GTP-binding protein domain%3B translation elongation factor TU gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2107 Toce_2108 Toce_2108 Toce_2108 2113759 2114982 + transposase IS116/IS110/IS902 family protein COGs: COG3547 Transposase and inactivated derivatives~InterPro IPR003346~KEGG: pth:PTH_2606 transposase~PFAM: transposase IS116/IS110/IS902 family protein~SPTR: Hypothetical transposase%3B~PFAM: Transposase IS116/IS110/IS902 family%3B Transposase gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2108 Toce_2109 Toce_2109 Toce_2109 2115534 2116178 - RNA polymerase%2C sigma 30 subunit%2C SigH COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterProIPR000792:IPR000943:IPR014218:IPR014284:IPR 016371:IPR007627:IPR013249~KEGG: hmo:HM1_1361 RNA polymerase sigma-70 factor~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~SPTR: RNA polymerase sigma-70 factor%3B~TIGRFAM: RNA polymerase sigma-H factor%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family%3B RNA polymerase sigma-H factor gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2109 Toce_2110 Toce_2110 Toce_2110 2116241 2116771 - protein of unknown function DUF901 COGs: COG3688 RNA-binding protein containing a PIN domain~InterPro IPR010298~KEGG: aoe:Clos_0474 hypothetical protein~PFAM: protein of unknown function DUF901~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF901) gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2110 Toce_2111 Toce_2111 Toce_2111 2116764 2117522 - RNA methyltransferase%2C TrmH family%2C group 3 COGs: COG0566 rRNA methylase~InterPro IPR004441:IPR013123:IPR001537~KEGG: cth:Cthe_2060 RNA methyltransferase~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~SPTR: RNA methyltransferase%2C TrmH family%2C group 3%3B~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: SpoU rRNA Methylase family%3B RNA 2'-O ribose methyltransferase substrate binding~TIGRFAM: rRNA methylase%2C putative%2C group 3 gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2111 Toce_2112 Toce_2112 Toce_2112 2117616 2118758 + thymidylate synthase%2C flavin-dependent COGs: COG1351 alternative thymidylate synthase~InterPro IPR003669:IPR004042~KEGG: hor:Hore_00980 thymidylate synthase%2C flavin-dependent~PFAM: thymidylate synthase complementing protein ThyX~SPTR: Thymidylate synthase%2C flavin-dependent%3B~TIGRFAM: thymidylate synthase%2C flavin-dependent~PFAM: Thymidylate synthase complementing protein~TIGRFAM: thymidylate synthase%2C flavin-dependent gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2112 Toce_2113 Toce_2113 Toce_2113 2118727 2119137 - ribonuclease III COGs: COG1939 conserved hypothetical protein~InterPro IPR008226:IPR000999~KEGG: tit:Thit_1995 ribonuclease III~PFAM: ribonuclease III~SPTR: Ribonuclease III%3B~PFAM: RNase3 domain gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2113 Toce_2114 Toce_2114 Toce_2114 2119154 2120551 - cysteinyl-tRNA synthetase COGs: COG0215 Cysteinyl-tRNA synthetase~InterPro IPR015803:IPR002308:IPR015273~KEGG: tit:Thit_1996 cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia %3B Cysteinyl-tRNA synthetase class Ia DALR~PRIAM: Cysteine--tRNA ligase~SPTR: Cysteinyl-tRNA synthetase%3B~TIGRFAM: cysteinyl-tRNA synthetase~PFAM: tRNA synthetases class I (C) catalytic domain%3B DALR domain~TIGRFAM: cysteinyl-tRNA synthetase gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2114 Toce_2115 Toce_2115 Toce_2115 2120499 2121218 - serine O-acetyltransferase COGs: COG1045 Serine acetyltransferase~InterPro IPR005881:IPR001451~KEGG: chy:CHY_2339 serine acetyltransferase~SPTR: Serine O-acetyltransferase%3B~TIGRFAM: serine O-acetyltransferase~PFAM: Serine acetyltransferase%2C N-terminal%3B Bacterial transferase hexapeptide (three repeats)~TIGRFAM: serine O-acetyltransferase gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2115 Toce_2116 Toce_2116 Toce_2116 2121580 2122053 - rare lipoprotein A COGs: COG0797 Lipoprotein~InterPro IPR012997:IPR005132~KEGG: mar:MAE_42190 RlpA-like lipoprotein precursor~PFAM: Rare lipoprotein A~SPTR: RlpA-like lipoprotein%3B~TIGRFAM: rare lipoprotein A~PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel~TIGRFAM: rare lipoprotein A gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2116 Toce_2117 Toce_2117 Toce_2117 2122244 2122717 - 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase~InterPro IPR020555:IPR003526~KEGG: pth:PTH_0290 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: MECDP-synthase~SPTR: 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase%3B~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: YgbB family~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2117 Toce_2118 Toce_2118 Toce_2118 2122724 2123422 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase~InterPro IPR018294:IPR001228~KEGG: tit:Thit_2003 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase~SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase%3B~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: Uncharacterized protein family UPF0007~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2118 Toce_2119 Toce_2119 Toce_2119 2123438 2124520 - PilT protein domain protein COGs: COG4956 Integral membrane protein (PIN domain superfamily)~InterPro IPR006596:IPR002716:IPR002792~KEGG: tpd:Teth39_0345 PilT domain-containing protein~PFAM: PilT protein domain protein~SMART: Nucleotide binding protein PINc~SPTR: PilT protein domain protein%3B~PFAM: TRAM domain%3B PIN domain gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2119 Toce_2120 Toce_2120 Toce_2120 2124661 2125137 - transcriptional regulator%2C CarD family COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD~InterPro IPR003711~KEGG: adg:Adeg_0399 transcriptional regulator%2C CarD family~PFAM: transcription factor CarD~SPTR: Transcriptional regulator%2C CarD family%3B~PFAM: CarD-like/TRCF domain gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2120 Toce_2121 Toce_2121 Toce_2121 2125363 2125758 + conserved hypothetical protein KEGG: sth:STH3126 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2121 Toce_2122 Toce_2122 Toce_2122 2125772 2127121 - DNA repair protein RadA COGs: COG1066 ATP-dependent serine protease~InterPro IPR003593:IPR004504:IPR007694~KEGG: cdf:CD0027 DNA repair protein RadA~PFAM: DnaB domain protein helicase domain protein~SMART: AAA ATPase~SPTR: DNA repair protein radA%3B~TIGRFAM: DNA repair protein RadA~PFAM: KaiC%3B Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: DNA repair protein RadA%3B protein RecA gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2122 Toce_2123 Toce_2123 Toce_2123 2127215 2129659 - ATPase AAA-2 domain protein COGs: COG0542 ATPase with chaperone activity ATP-binding subunit~InterProIPR003593:IPR018368:IPR001270:IPR004176:IPR 003959:IPR001943:IPR013093:IPR019489~KEGG: tte:TTE2327 ATPase with chaperone activity%2C ATP-binding subunit~PFAM: ATPase AAA-2 domain protein%3B Clp domain protein%3B AAA ATPase central domain protein%3B UvrB/UvrC protein%3B Clp ATPase-like~SMART: AAA ATPase~SPTR: ATPases with chaperone activity%2C ATP-binding subunit%3B~PFAM: AAA domain (Cdc48 subfamily)%3B C-terminal%2C D2-small domain%2C of ClpB protein%3B Clp amino terminal domain%3B ATPase family associated with various cellular activities (AAA)%3B UvrB/uvrC motif~TIGRFAM: ATP-dependent chaperone ClpB gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2123 Toce_2124 Toce_2124 Toce_2124 2129670 2130722 - ATP:guanido phosphotransferase COGs: COG3869 Arginine kinase~InterPro IPR000749~KEGG: hmo:HM1_1343 ATP:guanido phosphotransferase%2C putative~PFAM: ATP:guanido phosphotransferase~SPTR: ATP:guanido phosphotransferase%2C putative%3B~PFAM: ATP:guanido phosphotransferase%2C C-terminal catalytic domain gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2124 Toce_2125 Toce_2125 Toce_2125 2130738 2131256 - UvrB/UvrC protein COGs: COG3880 Uncharacterized protein with conserved CXXC pairs~InterPro IPR001943~KEGG: tit:Thit_2016 UvrB/UvrC protein~PFAM: UvrB/UvrC protein~SPTR: UvrB/UvrC protein%3B~PFAM: UvrB/uvrC motif gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2125 Toce_2126 Toce_2126 Toce_2126 2131253 2131735 - transcriptional regulator COGs: COG4463 Transcriptional repressor of class III stress genes~InterPro IPR008463~KEGG: chy:CHY_2351 transcriptional regulator CtsR~PFAM: Firmicute transcriptional repressor of class III stress genes~SPTR: Transcriptional regulator CtsR%3B~PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR) gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2126 Toce_2127 Toce_2127 Toce_2127 2131859 2132098 - DNA ligase I KEGG: ddi:DDB_0232265 DNA ligase I~SPTR: DNA ligase 1 gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2127 Toce_2128 Toce_2128 Toce_2128 2132191 2134272 - translation elongation factor 2 (EF-2/EF-G) COGs: COG0480 Translation elongation factors (GTPase)~InterProIPR000795:IPR004540:IPR005225:IPR004161:IPR 005517:IPR000640~KEGG: tte:TTE2333 elongation factor G~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV%3B elongation factor G domain protein~SPTR: Translation elongation factor G%3B~TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: Elongation factor Tu domain 2%3B Elongation factor G C-terminus%3B Elongation factor Tu GTP binding domain%3B Elongation factor G%2C domain IV~TIGRFAM: translation elongation factor EF-G%3B small GTP-binding protein domain gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2128 Toce_2129 Toce_2129 Toce_2129 2134443 2135891 - inosine-5'-monophosphate dehydrogenase COGs: COG0516 IMP dehydrogenase/GMP reductase~InterProIPR000644:IPR015875:IPR005990:IPR018529:IPR 001093~KEGG: tte:TTE0582 IMP dehydrogenase/GMP reductase~PFAM: IMP dehydrogenase/GMP reductase%3B CBS domain containing protein~PRIAM: IMP dehydrogenase~SMART: CBS domain containing protein~SPTR: Inosine-5'-monophosphate dehydrogenase%3B~TIGRFAM: inosine-5'-monophosphate dehydrogenase~PFAM: CBS domain%3B IMP dehydrogenase / GMP reductase domain~TIGRFAM: inosine-5'-monophosphate dehydrogenase gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2129 Toce_2130 Toce_2130 Toce_2130 2136085 2137326 - sodium:dicarboxylate symporter COGs: COG1301 Na+/H+-dicarboxylate symporter~InterPro IPR001991~KEGG: smf:Smon_0155 sodium:dicarboxylate symporter~PFAM: sodium:dicarboxylate symporter~SPTR: H(+):sodium-glutamate symporter%3B~PFAM: Sodium:dicarboxylate symporter family gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2130 Toce_2131 Toce_2131 Toce_2131 2137511 2137783 - protein of unknown function DUF503 COGs: COG1550 conserved hypothetical protein~InterPro IPR007546~KEGG: cth:Cthe_0584 hypothetical protein~PFAM: protein of unknown function DUF503~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF503) gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2131 Toce_2132 Toce_2132 Toce_2132 2138095 2138397 + protein of unknown function UPF0016 COGs: COG2119 membrane protein~InterPro IPR001727~KEGG: amt:Amet_4329 hypothetical protein~PFAM: protein of unknown function UPF0016~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized protein family UPF0016 gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2132 Toce_2133 Toce_2133 Toce_2133 2138442 2140760 - ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent InterPro IPR019761:IPR000788:IPR013344:IPR013509~KEGG: tit:Thit_2029 ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein~PRIAM: Ribonucleoside-diphosphate reductase~SPTR: Ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent%3B~TIGRFAM: ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: Ribonucleotide reductase%2C all-alpha domain%3B Ribonucleotide reductase%2C barrel domain~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha subunit%3B ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2133 Toce_2134 Toce_2134 Toce_2134 2141000 2141413 - ferric uptake regulator%2C Fur family COGs: COG0735 Fe2+/Zn2+ uptake regulation protein~InterPro IPR002481~KEGG: hor:Hore_08960 ferric uptake regulator%2C Fur family~PFAM: ferric-uptake regulator~SPTR: Ferric uptake regulator%2C Fur family%3B~PFAM: Ferric uptake regulator family gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2134 Toce_2135 Toce_2135 Toce_2135 2141421 2141546 - conserved hypothetical protein KEGG: gur:Gura_3631 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2135 Toce_2136 Toce_2136 Toce_2136 2141825 2141929 + hypothetical protein gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2136 Toce_2137 Toce_2137 Toce_2137 2141955 2142854 - Patatin COGs: COG1752 esterase of the alpha-beta hydrolase superfamily~InterPro IPR002641~KEGG: patatin~PFAM: Patatin~SPTR: Patatin%3B~PFAM: Patatin-like phospholipase gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2137 Toce_2138 Toce_2138 Toce_2138 2142966 2143910 - thiamine pyrophosphate protein domain protein TPP-binding protein COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit~InterPro IPR000408:IPR011766~KEGG: ate:Athe_0877 thiamine pyrophosphate protein domain protein TPP-binding~PFAM: thiamine pyrophosphate protein domain protein TPP-binding~SPTR: Thiamine pyrophosphate protein domain protein TPP-binding%3B~PFAM: Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2138 Toce_2139 Toce_2139 Toce_2139 2143922 2145103 - pyruvate ferredoxin oxidoreductase%2C alpha subunit COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit~InterPro IPR002880~KEGG: csc:Csac_1460 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein~PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~SPTR: Pyruvate ferredoxin oxidoreductase%2C alpha subunit%3B~PFAM: domain gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2139 Toce_2140 Toce_2140 Toce_2140 2145093 2145470 - pyruvate ferredoxin oxidoreductase%2C delta subunit COGs: COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase delta subunit~InterPro IPR017900:IPR011898:IPR017896~KEGG: cth:Cthe_2391 pyruvate ferredoxin oxidoreductase%2C delta subunit~SPTR: Pyruvate ferredoxin oxidoreductase%2C delta subunit%3B~TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit~PFAM: 4Fe-4S binding domain~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C delta subunit%2C pyruvate/2-ketoisovalerate family gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2140 Toce_2141 Toce_2141 Toce_2141 2145467 2146045 - pyruvate ferredoxin oxidoreductase%2C gamma subunit COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit~InterPro IPR011894:IPR019752~KEGG: dtu:Dtur_0260 pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~PRIAM: Pyruvate synthase~SPTR: Pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit%3B~TIGRFAM: pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit~PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase~TIGRFAM: 2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2141 Toce_2142 Toce_2142 Toce_2142 2146293 2146559 - pro-sigmaK processing inhibitor BofA InterPro IPR010001~KEGG: amt:Amet_4774 sigmaK-factor processing regulatory BofA~PFAM: sigmaK-factor processing regulatory BofA~SPTR: SigmaK-factor processing regulatory BofA%3B~TIGRFAM: pro-sigmaK processing inhibitor BofA~PFAM: SigmaK-factor processing regulatory protein BofA~TIGRFAM: pro-sigmaK processing inhibitor BofA gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2142 Toce_2143 Toce_2143 Toce_2143 2146592 2146864 - hypothetical protein KEGG: hor:Hore_20750 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2508) gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2143 Toce_2144 Toce_2144 Toce_2144 2147076 2147660 + Lysine exporter protein (LYSE/YGGA) COGs: COG1280 Putative threonine efflux protein~InterPro IPR001123~KEGG: cbe:Cbei_3178 lysine exporter protein LysE/YggA~PFAM: Lysine exporter protein (LYSE/YGGA)~SPTR: Lysine exporter protein (LYSE/YGGA)%3B~PFAM: LysE type translocator gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2144 Toce_2145 Toce_2145 Toce_2145 2147754 2147864 + pseudogene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2145 Toce_2146 Toce_2146 Toce_2146 2148078 2148674 - DNA replication and repair protein RecR COGs: COG0353 Recombinational DNA repair protein (RecF pathway)~InterProIPR003583:IPR006154:IPR015967:IPR000093:IPR 006171~KEGG: cth:Cthe_2142 recombination protein RecR~PFAM: TOPRIM domain protein%3B Zinc finger C4-type%2C RecR~SMART: Toprim sub domain protein%3B Helix-hairpin-helix DNA-binding class 1~SPTR: Recombination protein RecR%3B~TIGRFAM: recombination protein RecR~PFAM: Toprim domain%3B RecR protein%3B Helix-hairpin-helix motif~TIGRFAM: recombination protein RecR gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2146 Toce_2147 Toce_2147 Toce_2147 2148687 2149016 - conserved hypothetical protein COGs: COG0718 conserved hypothetical protein~InterPro IPR004401~KEGG: hmo:HM1_0810 hypothetical protein~PFAM: conserved hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised BCR%2C YbaB family COG0718~TIGRFAM: conserved hypothetical protein TIGR00103 gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2147 Toce_2148 Toce_2148 Toce_2148 2149038 2150753 - DNA polymerase III%2C subunits gamma and tau COGs: COG2812 DNA polymerase III gamma/tau subunits~InterPro IPR003593:IPR012763:IPR003959~KEGG: cth:Cthe_2144 DNA polymerase III subunits gamma and tau~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~SPTR: DNA polymerase III%2C subunits gamma and tau%3B~TIGRFAM: DNA polymerase III%2C subunits gamma and tau~PFAM: ATPase family associated with various cellular activities (AAA)%3B DNA polymerase III subunits gamma and tau domain III~TIGRFAM: DNA polymerase III%2C delta' subunit%3B DNA polymerase III%2C subunits gamma and tau gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2148 Toce_2149 Toce_2149 Toce_2149 2151298 2151477 - hypothetical protein KEGG: pvx:PVX_084385 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2149 Toce_2150 Toce_2150 Toce_2150 2151553 2152116 - conserved hypothetical protein KEGG: ate:Athe_2670 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2150 Toce_2151 Toce_2151 Toce_2151 2152088 2152858 - protein of unknown function DUF955 COGs: COG2856 Zn peptidase~InterPro IPR010359~KEGG: csc:Csac_2641 hypothetical protein~PFAM: protein of unknown function DUF955~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function (DUF955) gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2151 Toce_2152 Toce_2152 Toce_2152 2152863 2153207 - helix-turn-helix domain protein InterPro IPR001387~KEGG: ate:Athe_2467 transcriptional regulator%2C XRE family~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~SPTR: Transcriptional regulator%2C XRE family%3B~PFAM: Helix-turn-helix gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2152 Toce_2153 Toce_2153 Toce_2153 2153989 2154447 - tRNA-adenosine deaminase COGs: COG0590 Cytosine/adenosine deaminase~InterPro IPR016192:IPR002125~KEGG: bld:BLi00027 YaaJ~PFAM: CMP/dCMP deaminase zinc-binding~SPTR: YaaJ%3B~PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2153 Toce_2154 Toce_2154 Toce_2154 2155034 2156188 + Integrase catalytic region InterPro IPR001584~KEGG: adg:Adeg_0459 integrase catalytic region~PFAM: Integrase catalytic region~SPTR: Integrase catalytic region%3B~PFAM: Integrase core domain gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2154 Toce_2155 Toce_2155 Toce_2155 2156337 2157533 + major facilitator superfamily MFS_1 COGs: COG2814 Arabinose efflux permease~InterPro IPR001958:IPR011701~KEGG: sth:STH2695 multidrug efflux protein~PFAM: major facilitator superfamily MFS_1~SPTR: Multidrug efflux protein%3B~PFAM: Major Facilitator Superfamily gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2155 Toce_2156 Toce_2156 Toce_2156 2157539 2157970 - hypothetical protein KEGG: dau:Daud_0974 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2156 Toce_2157 Toce_2157 Toce_2157 2158078 2158323 + hypothetical protein KEGG: afl:Aflv_2327 stage V sporulation protein R required for dehydratation of the spore core and assembly of the coat~SPTR: Putative uncharacterized protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2157 Toce_2158 Toce_2158 Toce_2158 2158305 2158889 + conserved hypothetical protein KEGG: drm:Dred_3004 hypothetical protein~SPTR: UbiD family decarboxylase gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2158 Toce_2159 Toce_2159 Toce_2159 2158911 2159522 - GCN5-related N-acetyltransferase COGs: COG0456 Acetyltransferase~InterPro IPR022272:IPR000182~KEGG: csc:Csac_2705 GCN5-related N-acetyltransferase~PFAM: GCN5-related N-acetyltransferase~SPTR: GCN5-related N-acetyltransferase%3B~PFAM: Acetyltransferase (GNAT) family gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2159 Toce_2160 Toce_2160 Toce_2160 2159488 2160747 - polysaccharide deacetylase COGs: COG0726 xylanase/chitin deacetylase~InterPro IPR003811:IPR002509~KEGG: bpf:BpOF4_11995 chitooligosaccharide deacetylase~PFAM: polysaccharide deacetylase%3B protein of unknown function DUF205~SPTR: Chitooligosaccharide deacetylase%3B~PFAM: Domain of unknown function (DUF205)%3B Polysaccharide deacetylase~TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2160 Toce_2161 Toce_2161 Toce_2161 2160952 2161383 + DNA polymerase beta domain protein region InterPro IPR002934~KEGG: chy:CHY_2181 nucleotidyltransferase domain-containing protein~PFAM: DNA polymerase beta domain protein region~SPTR: Putative nucleotidyltransferase domain protein%3B~PFAM: Nucleotidyltransferase domain gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2161 Toce_2162 Toce_2162 Toce_2162 2161383 2161811 + protein of unknown function DUF86 COGs: COG2445 conserved hypothetical protein~InterPro IPR008201~KEGG: ate:Athe_0224 protein of unknown function DUF86~PFAM: protein of unknown function DUF86~SPTR: Putative toxin-antitoxin system%2C antitoxin component%3B~PFAM: Protein of unknown function DUF86 gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2162 Toce_2163 Toce_2163 Toce_2163 2161823 2163133 - protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: aoe:Clos_2614 hypothetical protein~PFAM: protein of unknown function DUF214~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2163 Toce_2164 Toce_2164 Toce_2164 2163179 2164912 - efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR003997:IPR006143:IPR000089~KEGG: aoe:Clos_2615 RND family efflux transporter MFP subunit~PFAM: biotin/lipoyl attachment domain-containing protein%3B secretion protein HlyD family protein~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2164 Toce_2165 Toce_2165 Toce_2165 2164991 2165677 - ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR017871:IPR003439~KEGG: aoe:Clos_2616 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2165 Toce_2166 Toce_2166 Toce_2166 2165867 2166481 - transcriptional regulator%2C TetR family COGs: COG1309 Transcriptional regulator~InterPro IPR001647~KEGG: swo:Swol_0177 TetR family transcriptional regulator~PFAM: regulatory protein TetR~SPTR: Putative transcriptional regulator%2C TetR family%3B~PFAM: Bacterial regulatory proteins%2C tetR family gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2166 Toce_2167 Toce_2167 Toce_2167 2166509 2167648 - outer membrane efflux protein COGs: COG1538 Outer membrane protein~InterPro IPR003423~KEGG: bbe:BBR47_54170 hypothetical protein~PFAM: outer membrane efflux protein~SPTR: Putative uncharacterized protein%3B~PFAM: Outer membrane efflux protein gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2167 Toce_2168 Toce_2168 Toce_2168 2167655 2170759 - acriflavin resistance protein COGs: COG0841 Cation/multidrug efflux pump~InterPro IPR018073:IPR001036~KEGG: hor:Hore_05050 acriflavin resistance protein~PFAM: acriflavin resistance protein~SPTR: Acriflavin resistance protein%3B~PFAM: AcrB/AcrD/AcrF family~TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)%3B The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2168 Toce_2169 Toce_2169 Toce_2169 2170756 2172000 - efflux transporter%2C RND family%2C MFP subunit COGs: COG1566 Multidrug resistance efflux pump~InterPro IPR003997:IPR006143~KEGG: mta:Moth_2370 secretion protein HlyD~PFAM: secretion protein HlyD family protein~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2169 Toce_2170 Toce_2170 Toce_2170 2172208 2173824 + efflux transporter%2C RND family%2C MFP subunit COGs: COG0845 Membrane-fusion protein~InterPro IPR003997:IPR006143:IPR000089~KEGG: tit:Thit_0217 efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein%3B biotin/lipoyl attachment domain-containing protein~SPTR: Efflux transporter%2C RND family%2C MFP subunit%3B~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: HlyD family secretion protein~TIGRFAM: RND family efflux transporter%2C MFP subunit gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2170 Toce_2171 Toce_2171 Toce_2171 2173841 2174521 + ABC transporter related protein COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component~InterPro IPR003593:IPR017871:IPR003439:IPR017911~KEGG: ate:Athe_2297 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter~TIGRFAM: putative bacteriocin export ABC transporter%2C lactococcin 972 group gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2171 Toce_2172 Toce_2172 Toce_2172 2174523 2175698 + protein of unknown function DUF214 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component~InterPro IPR003838~KEGG: tit:Thit_0219 protein of unknown function DUF214~PFAM: protein of unknown function DUF214~SPTR: Putative uncharacterized protein%3B~PFAM: Predicted permease gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2172 Toce_2173 Toce_2173 Toce_2173 2175801 2176010 - pseudogene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2173 Toce_2174 Toce_2174 Toce_2174 2176309 2177979 - S-layer domain-containing protein KEGG: aoe:Clos_2627 S-layer domain-containing protein~SPTR: S-layer domain protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2174 Toce_2175 Toce_2175 Toce_2175 2177979 2178404 - S-layer domain protein InterPro IPR001119~KEGG: csc:Csac_2451 S-layer domain-containing protein~PFAM: S-layer domain protein~SPTR: S-layer domain protein%3B~PFAM: S-layer homology domain gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2175 Toce_2176 Toce_2176 Toce_2176 2178859 2179623 - hypothetical protein KEGG: tit:Thit_0724 protein of unknown function DUF2143~SPTR: Putative uncharacterized protein%3B~PFAM: Yip1 domain gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2176 Toce_2177 Toce_2177 Toce_2177 2179643 2180566 - signal peptide peptidase A COGs: COG0616 Periplasmic serine protease (ClpP class)~InterPro IPR001907:IPR004635:IPR002142~KEGG: hmo:HM1_1071 signal peptide peptidase SppA%2C 36k type~PFAM: peptidase S49~SPTR: Signal peptide peptidase sppa%2C 36k type%3B~TIGRFAM: signal peptide peptidase SppA%2C 36K type~PFAM: Peptidase family S49~TIGRFAM: signal peptide peptidase SppA%2C 36K type gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2177 Toce_2178 Toce_2178 Toce_2178 2180553 2180870 - DNA polymerase beta domain protein region InterPro IPR002934~KEGG: gur:Gura_2470 DNA polymerase beta subunit~PFAM: DNA polymerase beta domain protein region~SPTR: DNA polymerase%2C beta domain protein region%3B~PFAM: Nucleotidyltransferase domain gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2178 Toce_2179 Toce_2179 Toce_2179 2180899 2183277 - peptidase S16 lon domain protein COGs: COG1067 ATP-dependent protease~InterPro IPR001984~KEGG: hor:Hore_03380 peptidase S16 lon domain protein~SPTR: Peptidase S16 lon domain protein%3B~PFAM: Lon protease (S16) C-terminal proteolytic domain~TIGRFAM: lon-related putative ATP-dependent protease gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2179 Toce_2180 Toce_2180 Toce_2180 2183424 2183546 + conserved hypothetical protein KEGG: dhd:Dhaf_1776 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2180 Toce_2181 Toce_2181 Toce_2181 2183578 2185200 - CTP synthase COGs: COG0504 CTP synthase (UTP-ammonia lyase)~InterPro IPR004468:IPR017456:IPR000991:IPR017926~KEGG: chy:CHY_0125 CTP synthetase~PFAM: CTP synthase-like%3B glutamine amidotransferase class-I~PRIAM: CTP synthase~SPTR: CTP synthase%3B~TIGRFAM: CTP synthase~PFAM: Glutamine amidotransferase class-I%3B CTP synthase N-terminus~TIGRFAM: CTP synthase gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2181 Toce_2182 Toce_2182 Toce_2182 2185350 2185991 - Zn-dependent hydrolase COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold~KEGG: tte:TTE2532 Zn-dependent hydrolase~SPTR: Predicted Zn-dependent hydrolases of the beta-lactamase fold gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2182 Toce_2183 Toce_2183 Toce_2183 2186186 2187607 - PAS modulated sigma54 specific transcriptional regulator%2C Fis family COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains~InterProIPR000014:IPR003593:IPR002078:IPR020441:IPR 013656:IPR002197~KEGG: amt:Amet_4554 sigma-54 dependent trancsriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B PAS fold-4 domain protein%3B helix-turn-helix Fis-type~SMART: AAA ATPase%3B PAS domain containing protein~SPTR: Sigma54 specific transcriptional regulator%2C Fis family%3B~TIGRFAM: PAS sensor protein~PFAM: Bacterial regulatory protein%2C Fis family%3B Sigma-54 interaction domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2183 Toce_2184 Toce_2184 Toce_2184 2187914 2189620 - arginyl-tRNA synthetase COGs: COG0018 Arginyl-tRNA synthetase~InterProIPR001412:IPR015945:IPR001278:IPR005148:IPR 008909~KEGG: pth:PTH_2844 arginyl-tRNA synthetase~PFAM: Arginyl-tRNA synthetase%2C class Ic%2C core%3B arginyl tRNA synthetase domain protein%3B DALR anticodon binding domain protein~PRIAM: Arginine--tRNA ligase~SPTR: Arginyl-tRNA synthetase%3B~TIGRFAM: arginyl-tRNA synthetase~PFAM: DALR anticodon binding domain%3B Arginyl tRNA synthetase N terminal domain%3B tRNA synthetases class I (R)~TIGRFAM: arginyl-tRNA synthetase gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2184 Toce_2185 Toce_2185 Toce_2185 2189725 2190072 - hypothetical protein KEGG: vsa:VSAL_I1269 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2185 Toce_2186 Toce_2186 Toce_2186 2190311 2190931 + TrkA-C domain protein COGs: COG0490 Putative regulatory ligand-binding protein related to C-terminal domains of K+ channels~InterPro IPR000524:IPR006037~KEGG: tex:Teth514_1200 TrkA domain-containing protein~PFAM: TrkA-C domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: TrkA-C domain protein%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B TrkA-C domain gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2186 Toce_2187 Toce_2187 Toce_2187 2191026 2192129 + glycine betaine/L-proline ABC transporter%2C ATPase subunit COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components~InterProIPR017871:IPR003439:IPR000644:IPR003593:IPR 005892~KEGG: tit:Thit_1623 glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B CBS domain containing protein~SMART: AAA ATPase%3B CBS domain containing protein~SPTR: Glycine betaine/L-proline ABC transporter%2C ATPase subunit%3B~TIGRFAM: glycine betaine/L-proline ABC transporter%2C ATPase subunit~PFAM: ABC transporter%3B CBS domain~TIGRFAM: glycine betaine/L-proline transport ATP binding subunit gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2187 Toce_2188 Toce_2188 Toce_2188 2192154 2192795 + binding-protein-dependent transport systems inner membrane component COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component~InterPro IPR000515~KEGG: tit:Thit_1622 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2188 Toce_2189 Toce_2189 Toce_2189 2192833 2193753 + Substrate-binding region of ABC-type glycine betaine transport system COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)~InterPro IPR007210~KEGG: tex:Teth514_1203 substrate-binding region of ABC-type glycine betaine transport system~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SPTR: Substrate-binding region of ABC-type glycine betaine transport system%3B~PFAM: Substrate binding domain of ABC-type glycine betaine transport system gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2189 Toce_2190 Toce_2190 Toce_2190 2194003 2195037 + ABC transporter related protein COGs: COG1135 ABC-type metal ion transport system ATPase component~InterProIPR017871:IPR003439:IPR017908:IPR003593:IPR 018449~KEGG: tex:Teth514_1769 ABC transporter related~PFAM: ABC transporter related%3B NIL domain~SMART: AAA ATPase~SPTR: ABC transporter related protein%3B~PFAM: ABC transporter%3B NIL domain~TIGRFAM: D-methionine ABC transporter%2C ATP-binding protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2190 Toce_2191 Toce_2191 Toce_2191 2195030 2195683 + binding-protein-dependent transport systems inner membrane component COGs: COG2011 ABC-type metal ion transport system permease component~InterPro IPR006140:IPR000515~KEGG: tpd:Teth39_1333 binding-protein-dependent transport systems inner membrane component~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: Binding-protein-dependent transport systems inner membrane component%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2191 Toce_2192 Toce_2192 Toce_2192 2195717 2196553 + NLPA lipoprotein COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen~InterPro IPR004872~KEGG: tpd:Teth39_1334 YaeC family lipoprotein~PFAM: NLPA lipoprotein~SPTR: Lipoprotein%2C YaeC family%3B~PFAM: NLPA lipoprotein~TIGRFAM: lipoprotein%2C YaeC family gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2192 Toce_2193 Toce_2193 Toce_2193 2196569 2197228 + Asp/Glu/hydantoin racemase InterPro IPR018187:IPR015942~KEGG: tpd:Teth39_1335 Asp/Glu racemase~PFAM: Asp/Glu/hydantoin racemase~SPTR: Asp/Glu racemase%3B~PFAM: Asp/Glu/Hydantoin racemase gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2193 Toce_2194 Toce_2194 Toce_2194 2197225 2198235 - L-asparaginase%2C type I COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D~InterPro IPR020827:IPR006034:IPR006033~KEGG: afl:Aflv_2047 L-asparaginase~PFAM: Asparaginase/glutaminase~SPTR: L-asparaginase%2C type I%3B~TIGRFAM: L-asparaginase%2C type I~PFAM: Asparaginase~TIGRFAM: L-asparaginases%2C type I gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2194 Toce_2195 Toce_2195 Toce_2195 2198348 2199598 - sodium:dicarboxylate symporter COGs: COG1301 Na+/H+-dicarboxylate symporter~InterPro IPR001991~KEGG: tpd:Teth39_1134 sodium:dicarboxylate symporter~PFAM: sodium:dicarboxylate symporter~SPTR: Na+/H+-dicarboxylate symporters%3B~PFAM: Sodium:dicarboxylate symporter family gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2195 Toce_2196 Toce_2196 Toce_2196 2199741 2200562 - glutamate racemase COGs: COG0796 Glutamate racemase~InterPro IPR018187:IPR004391:IPR015942~KEGG: gsu:GSU2923 glutamate racemase~PFAM: Asp/Glu/hydantoin racemase~PRIAM: Glutamate racemase~SPTR: Glutamate racemase%3B~TIGRFAM: glutamate racemase~PFAM: Asp/Glu/Hydantoin racemase~TIGRFAM: glutamate racemase gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2196 Toce_2197 Toce_2197 Toce_2197 2200623 2201864 - Peptidoglycan-binding domain 1 protein COGs: COG1520 FOG: WD40-like repeat~InterPro IPR018391:IPR002477:IPR002372~KEGG: chl:Chy400_4120 serine/threonine protein kinase~PFAM: Peptidoglycan-binding domain 1 protein%3B Pyrrolo-quinoline quinone~SPTR: Similar to beta-propeller protein YxaL%3B~PFAM: Putative peptidoglycan binding domain%3B PQQ enzyme repeat gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2197 Toce_2198 Toce_2198 Toce_2198 2202017 2202211 - conserved hypothetical protein InterPro IPR018126~KEGG: tit:Thit_2217 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Small%2C acid-soluble spore proteins%2C alpha/beta type gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2198 Toce_2199 Toce_2199 Toce_2199 2202359 2203867 - arginine decarboxylase COGs: COG1982 Arginine/lysine/ornithine decarboxylase~InterPro IPR000310:IPR008286~KEGG: mta:Moth_2265 arginine decarboxylase~PFAM: Orn/Lys/Arg decarboxylase major region%3B Orn/Lys/Arg decarboxylase domain protein~SPTR: Arginine decarboxylase%3B~PFAM: Orn/Lys/Arg decarboxylase%2C C-terminal domain%3B Orn/Lys/Arg decarboxylase%2C major domain gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2199 Toce_2200 Toce_2200 Toce_2200 2203982 2204149 + hypothetical protein gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2200 Toce_2201 Toce_2201 Toce_2201 2204184 2205131 - stage II sporulation protein R InterPro IPR014202~KEGG: tex:Teth514_0606 hypothetical protein~PFAM: Sporulation stage II protein R~SPTR: Stage II sporulation protein R%3B~TIGRFAM: stage II sporulation protein R~PFAM: Stage II sporulation protein R (spore_II_R)~TIGRFAM: stage II sporulation protein R gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2201 Toce_2202 Toce_2202 Toce_2202 2205180 2206316 - germination protein%2C Ger(x)C family InterPro IPR008844~KEGG: tit:Thit_2221 germination protein%2C Ger(X)C family~PFAM: spore germination B3 GerAC family protein~SPTR: Germination protein%2C Ger(X)C family%3B~TIGRFAM: germination protein%2C Ger(x)C family~PFAM: Spore germination B3/ GerAC like%2C C-terminal~TIGRFAM: germination protein%2C Ger(x)C family gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2202 Toce_2203 Toce_2203 Toce_2203 2206313 2207410 - spore germination protein InterPro IPR004761~KEGG: tit:Thit_2222 spore germination protein~PFAM: Spore germination protein~SPTR: Spore germination protein%3B~TIGRFAM: spore germination protein~PFAM: Spore germination protein~TIGRFAM: spore germination protein (amino acid permease) gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2203 Toce_2204 Toce_2204 Toce_2204 2207391 2209010 - GerA spore germination protein InterPro IPR004995~KEGG: tit:Thit_2223 GerA spore germination protein~PFAM: GerA spore germination protein~SPTR: GerA spore germination protein%3B~PFAM: Bacillus/Clostridium GerA spore germination protein gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2204 Toce_2205 Toce_2205 Toce_2205 2209042 2209251 - hypothetical protein KEGG: ckl:CKL_3723 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2205 Toce_2206 Toce_2206 Toce_2206 2209722 2210591 - pyridoxal phosphate synthase yaaD subunit COGs: COG0214 Pyridoxine biosynthesis enzyme~InterPro IPR001852~KEGG: cbh:CLC_2676 pyridoxal biosynthesis lyase PdxS~PFAM: Vitamin B6 biosynthesis protein~SPTR: Pyridoxine biosynthesis protein%3B~TIGRFAM: pyridoxine biosynthesis protein~PFAM: SOR/SNZ family~TIGRFAM: pyridoxine biosynthesis protein gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2206 Toce_2207 Toce_2207 Toce_2207 2210753 2212276 + transcriptional regulator%2C GntR family with aminotransferase domain COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs~InterPro IPR000524:IPR004839~KEGG: amt:Amet_3155 GntR family transcriptional regulator~PFAM: aminotransferase class I and II%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Putative transcriptional regulator%2C GntR family%3B~PFAM: Aminotransferase class I and II%3B Bacterial regulatory proteins%2C gntR family gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2207 Toce_2208 Toce_2208 Toce_2208 2212273 2213607 - L-glutamine synthetase COGs: COG0174 Glutamine synthetase~InterPro IPR008147:IPR008146:IPR004809~KEGG: hor:Hore_21290 glutamine synthetase%2C type I~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~SPTR: Glutamine synthetase%3B~TIGRFAM: glutamine synthetase%2C type I~PFAM: Glutamine synthetase%2C catalytic domain%3B Glutamine synthetase%2C beta-Grasp domain~TIGRFAM: glutamine synthetase%2C type I gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2208 Toce_2209 Toce_2209 Toce_2209 2213777 2214124 + transcriptional regulator%2C MerR family COGs: COG0789 transcriptional regulator protein~InterPro IPR000551~KEGG: hor:Hore_21300 putative transcriptional regulator%2C MerR family~PFAM: regulatory protein MerR~SMART: regulatory protein MerR~SPTR: Putative transcriptional regulator%2C MerR family%3B~PFAM: MerR family regulatory protein gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2209 Toce_2210 Toce_2210 Toce_2210 2214149 2214820 - transcriptional regulator%2C GntR family COGs: COG1802 Transcriptional regulators~InterPro IPR000524:IPR011711~KEGG: cce:Ccel_2175 transcriptional regulator%2C GntR family~PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~SPTR: Transcriptional regulator%2C GntR family%3B~PFAM: Bacterial regulatory proteins%2C gntR family%3B FCD domain gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2210 Toce_2211 Toce_2211 Toce_2211 2214991 2215407 + protein of unknown function DUF6 transmembrane COGs: COG2510 membrane protein~InterPro IPR000620~KEGG: aoe:Clos_0838 hypothetical protein~PFAM: protein of unknown function DUF6 transmembrane~SPTR: Putative uncharacterized protein%3B~PFAM: EamA-like transporter family gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2211 Toce_2212 Toce_2212 Toce_2212 2215404 2215916 - flavin reductase domain protein FMN-binding protein COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family~InterPro IPR002563~KEGG: drm:Dred_2530 hypothetical protein~PFAM: flavin reductase domain protein FMN-binding~SPTR: Putative uncharacterized protein%3B~PFAM: Flavin reductase like domain gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2212 Toce_2213 Toce_2213 Toce_2213 2216384 2218378 - Nitrate reductase COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing~InterPro IPR006655:IPR006963:IPR006656:IPR006657~KEGG: drm:Dred_1345 molybdopterin oxidoreductase~PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~PRIAM: Nitrate reductase~SPTR: Molybdopterin oxidoreductase%3B~PFAM: Molybdopterin oxidoreductase%3B Molydopterin dinucleotide binding domain%3B Molybdopterin oxidoreductase Fe4S4 domain gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2213 Toce_2214 Toce_2214 Toce_2214 2218409 2219323 - hypothetical protein KEGG: bwe:BcerKBAB4_1652 putative lipoprotein~SPTR: Putative uncharacterized protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2214 Toce_2215 Toce_2215 Toce_2215 2219320 2220111 - conserved hypothetical protein KEGG: mta:Moth_0956 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: TM2 domain gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2215 Toce_2216 Toce_2216 Toce_2216 2220104 2220586 - conserved hypothetical protein KEGG: mta:Moth_0955 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2216 Toce_2217 Toce_2217 Toce_2217 2220583 2221134 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog~InterPro IPR000838:IPR014284:IPR007627:IPR013249~KEGG: pjd:Pjdr2_0120 RNA polymerase%2C sigma-24 subunit%2C ECF subfamily~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2~SPTR: RNA polymerase sigma factor%3B~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70%2C region 4%3B Sigma-70 region 2~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2217 Toce_2218 Toce_2218 Toce_2218 2221271 2221540 - hypothetical protein KEGG: ppp:PHYPADRAFT_104217 hypothetical protein~SPTR: Predicted protein gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2218 Toce_2219 Toce_2219 Toce_2219 2221515 2221973 - hypothetical protein KEGG: sli:Slin_6981 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2219 Toce_2220 Toce_2220 Toce_2220 2222012 2222662 - conserved hypothetical protein KEGG: pab:PAB1767 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2220 Toce_2221 Toce_2221 Toce_2221 2223285 2223764 - protein of unknown function DUF163 COGs: COG1576 conserved hypothetical protein~InterPro IPR003742:IPR016051~KEGG: chy:CHY_0058 hypothetical protein~PFAM: protein of unknown function DUF163~SPTR: Ribosomal RNA large subunit methyltransferase H%3B~PFAM: Predicted SPOUT methyltransferase~TIGRFAM: conserved hypothetical protein TIGR00246 gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2221 Toce_2222 Toce_2222 Toce_2222 2223930 2225081 - 4Fe-4S ferredoxin iron-sulfur binding domain protein COGs: COG2768 Uncharacterized Fe-S center protein~InterPro IPR017900:IPR017896~KEGG: nth:Nther_2897 4Fe-4S ferredoxin iron-sulfur binding domain protein~SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B~PFAM: 4Fe-4S binding domain gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2222 Toce_2223 Toce_2223 Toce_2223 2225071 2225229 - hypothetical protein KEGG: rcu:RCOM_0685200 hypothetical protein gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2223 Toce_2224 Toce_2224 Toce_2224 2225384 2226679 - Protein of unknown function DUF2088 COGs: COG3875 conserved hypothetical protein~InterPro IPR018657~KEGG: amt:Amet_0538 hypothetical protein~PFAM: Protein of unknown function DUF2088~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterized conserved protein (DUF2088) gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2224 Toce_2225 Toce_2225 Toce_2225 2226930 2227022 + hypothetical protein gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2225 Toce_2226 Toce_2226 Toce_2226 2227258 2231216 + pseudogene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2226 Toce_2227 Toce_2227 Toce_2227 2227865 2229388 + Integrase catalytic region COGs: COG4584 Transposase and inactivated derivatives~InterPro IPR017894:IPR001584~KEGG: cth:Cthe_1995 hypothetical protein~PFAM: Integrase catalytic region~SPTR: Putative uncharacterized protein%3B~PFAM: Integrase core domain gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2227 Toce_2228 Toce_2228 Toce_2228 2229382 2230113 + IstB domain protein ATP-binding protein COGs: COG1484 DNA replication protein~InterPro IPR003593:IPR002611~KEGG: cth:Cthe_1996 IstB-like ATP-binding protein~PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~SPTR: IstB-like ATP-binding protein%3B~PFAM: IstB-like ATP binding protein gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2228 Toce_2229 Toce_2229 Toce_2229 2231374 2231601 + DNA-directed RNA polymerase specialized sigma subunit%2C sigma24-like protein KEGG: pth:PTH_1893 DNA-directed RNA polymerase specialized sigma subunit%2C sigma24-like protein~SPTR: DNA-directed RNA polymerase specialized sigma subunit%2C sigma24 homolog gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2229 Toce_2230 Toce_2230 Toce_2230 2231852 2232484 + hypothetical protein KEGG: ame:726354 similar to trophinin isoform 2~SPTR: Chitin-binding protein gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2230 Toce_2231 Toce_2231 Toce_2231 2232560 2233333 - copper amine oxidase domain protein InterPro IPR012854~KEGG: dae:Dtox_3690 copper amine oxidase domain protein~PFAM: copper amine oxidase domain protein~SPTR: Copper amine oxidase domain protein%3B~PFAM: Copper amine oxidase N-terminal domain gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2231 Toce_2232 Toce_2232 Toce_2232 2233435 2234283 - Protein of unknown function YycH InterPro IPR018604~KEGG: tit:Thit_2308 protein of unknown function YycH~PFAM: Protein of unknown function YycH~SPTR: Putative uncharacterized protein%3B~PFAM: YycH protein gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2232 Toce_2233 Toce_2233 Toce_2233 2234302 2235600 - YycH family protein COGs: COG4863 conserved hypothetical protein~InterPro IPR009996~KEGG: amt:Amet_4755 hypothetical protein~PFAM: YycH family protein~SPTR: Putative uncharacterized protein%3B~PFAM: YycH protein gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2233 Toce_2234 Toce_2234 Toce_2234 2235616 2236014 - hypothetical protein KEGG: tpd:Teth39_1817 hypothetical protein~SPTR: Bacillopeptidase F gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2234 Toce_2235 Toce_2235 Toce_2235 2236102 2237874 - multi-sensor signal transduction histidine kinase COGs: COG5002 Signal transduction histidine kinase~InterProIPR005467:IPR000014:IPR003660:IPR003661:IPR 003594:IPR004358:IPR013767~KEGG: aoe:Clos_2783 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS fold domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein%3B PAS domain containing protein~SPTR: Sensor protein%3B~TIGRFAM: PAS sensor protein~PFAM: HAMP domain%3B Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B His Kinase A (phosphoacceptor) domain%3B PAS fold~TIGRFAM: PAS domain S-box gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2235 Toce_2236 Toce_2236 Toce_2236 2237886 2238575 - two component transcriptional regulator%2C winged helix family COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain~InterPro IPR001789:IPR001867~KEGG: cth:Cthe_2333 two component transcriptional regulator~PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~SPTR: Two component transcriptional regulator%2C winged helix family%3B~PFAM: Response regulator receiver domain%3B Transcriptional regulatory protein%2C C terminal gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2236 Toce_2237 Toce_2237 Toce_2237 2238636 2238899 - conserved hypothetical protein InterPro IPR020390~KEGG: drm:Dred_1679 hypothetical protein~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF2619) gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2237 Toce_2238 Toce_2238 Toce_2238 2238993 2239814 - ABC transporter related protein COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component~InterPro IPR017871:IPR003439:IPR003593~KEGG: tgr:Tgr7_3083 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase~SPTR: ABC transporter related%3B~PFAM: ABC transporter gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2238 Toce_2239 Toce_2239 Toce_2239 2239830 2240594 - binding-protein-dependent transport systems inner membrane component COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component~InterPro IPR000515~KEGG: avn:Avin_30900 ABC transporter%2C permease protein~PFAM: binding-protein-dependent transport systems inner membrane component~SPTR: ABC transporter%2C permease protein%3B~PFAM: Binding-protein-dependent transport system inner membrane component gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2239 Toce_2240 Toce_2240 Toce_2240 2240605 2241672 - Substrate-binding region of ABC-type glycine betaine transport system COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components~InterPro IPR007210~KEGG: sth:STH1653 ABC transporter substrate-binding protein~PFAM: Substrate-binding region of ABC-type glycine betaine transport system~SPTR: ABC transporter substrate-binding protein%3B~PFAM: NMT1/THI5 like gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2240 Toce_2241 Toce_2241 Toce_2241 2241797 2242246 + protein of unknown function DUF441 COGs: COG2707 membrane protein~InterPro IPR007382~KEGG: mta:Moth_0120 hypothetical protein~PFAM: protein of unknown function DUF441~SPTR: UPF0756 membrane protein Moth_0120%3B~PFAM: Protein of unknown function (DUF441) gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2241 Toce_2242 Toce_2242 Toce_2242 2242348 2243703 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR011098:IPR002482:IPR018392:IPR016047~KEGG: tpd:Teth39_0101 peptidase M23B~PFAM: Peptidase M23%3B G5 domain protein%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM~SPTR: Peptidase M23B%3B~PFAM: Peptidase family M23%3B LysM domain%3B G5 domain gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2242 Toce_2243 Toce_2243 Toce_2243 2244178 2245695 - Peptidase M1 membrane alanine aminopeptidase COGs: COG0308 Aminopeptidase N~InterPro IPR014782~KEGG: tte:TTE2694 aminopeptidase N~PFAM: Peptidase M1 membrane alanine aminopeptidase~SPTR: Aminopeptidase N%3B~PFAM: Peptidase family M1 gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2243 Toce_2244 Toce_2244 Toce_2244 2245926 2246021 - hypothetical protein gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2244 Toce_2245 Toce_2245 Toce_2245 2246018 2246398 - pseudogene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2245 Toce_2246 Toce_2246 Toce_2246 2246421 2246973 - pseudogene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2246 Toce_2247 Toce_2247 Toce_2247 2247054 2247434 - protein of unknown function DUF1696 InterPro IPR012544~KEGG: lsp:Bsph_2713 hypothetical protein~PFAM: protein of unknown function DUF1696~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF1696) gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2247 Toce_2248 Toce_2248 Toce_2248 2247987 2249276 - Adenylosuccinate synthetase COGs: COG0104 Adenylosuccinate synthase~InterPro IPR018220:IPR001114~KEGG: tte:TTE2696 adenylosuccinate synthetase~PFAM: adenylosuccinate synthetase~PRIAM: Adenylosuccinate synthase~SMART: adenylosuccinate synthetase~SPTR: Adenylosuccinate synthetase%3B~TIGRFAM: adenylosuccinate synthetase~PFAM: Adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthase gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2248 Toce_2249 Toce_2249 Toce_2249 2249292 2250692 - HI0933 family protein COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase~InterPro IPR004792~KEGG: tit:Thit_2322 FAD dependent oxidoreductase~PFAM: HI0933 family protein~SPTR: FAD dependent oxidoreductase%3B~PFAM: HI0933-like protein gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2249 Toce_2250 Toce_2250 Toce_2250 2250930 2251640 - transcriptional regulator%2C Crp/Fnr family COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase~InterPro IPR018335:IPR000595:IPR012318:IPR001808~KEGG: aoe:Clos_2132 Crp/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding%3B regulatory protein Crp~SPTR: Transcriptional regulator%2C Crp/Fnr family%3B~PFAM: Bacterial regulatory proteins%2C crp family%3B Cyclic nucleotide-binding domain gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2250 Toce_2251 Toce_2251 Toce_2251 2251668 2253023 - primary replicative DNA helicase COGs: COG0305 Replicative DNA helicase~InterPro IPR007694:IPR007692:IPR007693~KEGG: tte:TTE2774 replicative DNA helicase~PFAM: DnaB domain protein helicase domain protein~SPTR: Replicative DNA helicase%3B~TIGRFAM: replicative DNA helicase~PFAM: DnaB-like helicase N terminal domain%3B DnaB-like helicase C terminal domain~TIGRFAM: replicative DNA helicase gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2251 Toce_2252 Toce_2252 Toce_2252 2253029 2253475 - LSU ribosomal protein L9P COGs: COG0359 Ribosomal protein L9~InterPro IPR020070:IPR020594:IPR020069~KEGG: chy:CHY_0039 ribosomal protein L9~PFAM: Ribosomal protein L9-like~SPTR: 50S ribosomal protein L9%3B~TIGRFAM: ribosomal protein L9~PFAM: Ribosomal protein L9%2C N-terminal domain%3B Ribosomal protein L9%2C C-terminal domain~TIGRFAM: ribosomal protein L9 gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2252 Toce_2253 Toce_2253 Toce_2253 2253472 2255142 - phosphoesterase RecJ domain protein COGs: COG3887 signaling protein consisting of a modified GGDEF domain and a DHH domain~InterPro IPR000160:IPR001667:IPR003156~KEGG: aoe:Clos_2799 phosphoesterase domain-containing protein~PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~SPTR: Phosphoesterase RecJ domain protein%3B~PFAM: DHH family%3B DHHA1 domain gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2253 Toce_2254 Toce_2254 Toce_2254 2255160 2256101 - Protein of unknown function DUF2232%2C membrane COGs: COG4241 membrane protein~InterPro IPR018710~KEGG: aco:Amico_1419 protein of unknown function DUF2232%2C membrane~PFAM: Protein of unknown function DUF2232%2C membrane~SPTR: Membrane protein-like%3B~PFAM: Predicted membrane protein (DUF2232) gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2254 Toce_2255 Toce_2255 Toce_2255 2256147 2256371 - SSU ribosomal protein S18P COGs: COG0238 Ribosomal protein S18~InterPro IPR018275:IPR001648~KEGG: aac:Aaci_2928 ribosomal protein S18~PFAM: ribosomal protein S18~SPTR: Ribosomal protein S18%3B~TIGRFAM: ribosomal protein S18~PFAM: Ribosomal protein S18~TIGRFAM: ribosomal protein S18 gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2255 Toce_2256 Toce_2256 Toce_2256 2256390 2256821 - single-strand binding protein COGs: COG0629 Single-stranded DNA-binding protein~InterPro IPR000424:IPR011344~KEGG: nth:Nther_2915 single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n~SPTR: Single-stranded DNA-binding protein%3B~TIGRFAM: single-strand binding protein~PFAM: Single-strand binding protein family~TIGRFAM: single stranded DNA-binding protein (ssb) gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2256 Toce_2257 Toce_2257 Toce_2257 2256835 2257122 - SSU ribosomal protein S6P COGs: COG0360 Ribosomal protein S6~InterPro IPR020815:IPR020814:IPR000529~KEGG: tte:TTE2781 30S ribosomal protein S6~PFAM: Ribosomal protein S6%2C bacterial-like~SPTR: 30S ribosomal protein S6%3B~TIGRFAM: ribosomal protein S6~PFAM: Ribosomal protein S6~TIGRFAM: ribosomal protein S6 gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2257 Toce_2258 Toce_2258 Toce_2258 2257189 2257404 - protein of unknown function DUF951 COGs: COG4481 conserved hypothetical protein~InterPro IPR009296~KEGG: cth:Cthe_2512 hypothetical protein~PFAM: protein of unknown function DUF951~SPTR: Putative uncharacterized protein%3B~PFAM: Bacterial protein of unknown function (DUF951) gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2258 Toce_2259 Toce_2259 Toce_2259 2257401 2258255 - MscS Mechanosensitive ion channel COGs: COG0668 Small-conductance mechanosensitive channel~InterPro IPR006685~KEGG: amt:Amet_0029 MscS mechanosensitive ion channel~PFAM: MscS Mechanosensitive ion channel~SPTR: MscS Mechanosensitive ion channel%3B~PFAM: Mechanosensitive ion channel gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2259 Toce_2260 Toce_2260 Toce_2260 2258271 2258876 - selenium metabolism protein YedF InterPro IPR001455:IPR019870~KEGG: tte:TTE1883 transcriptional regulator~PFAM: SirA family protein~SPTR: Predicted Transcriptional regulator%3B~TIGRFAM: selenium metabolism protein YedF~PFAM: SirA-like protein~TIGRFAM: selenium metabolism protein YedF gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2260 Toce_2261 Toce_2261 Toce_2261 2258923 2259492 - Colicin V production protein InterPro IPR003825~KEGG: pth:PTH_2906 hypothetical protein~PFAM: Colicin V production protein~SPTR: Colicin V production protein%3B~PFAM: Colicin V production protein gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2261 Toce_2262 Toce_2262 Toce_2262 2259655 2260227 + sporulation protein YyaC InterPro IPR009665:IPR005080~KEGG: gyc:GYMC61_3551 sporulation protein YyaC~PFAM: protein of unknown function DUF1256~SPTR: Hypothetical conserved protein%3B~TIGRFAM: sporulation protein YyaC~PFAM: Protein of unknown function (DUF1256)~TIGRFAM: putative sporulation protein YyaC gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2262 Toce_2263 Toce_2263 Toce_2263 2260273 2261748 - transposase IS4 family protein COGs: COG3666 Transposase and inactivated derivatives~InterPro IPR002559~KEGG: tte:TTE2646 transposase~PFAM: transposase IS4 family protein~SPTR: Transposase%3B~PFAM: Transposase DDE domain%3B Transposase domain (DUF772) gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2263 Toce_2264 Toce_2264 Toce_2264 2261873 2262103 - protein of unknown function UPF0180 InterPro IPR005370~KEGG: cce:Ccel_3466 protein of unknown function UPF0180~PFAM: protein of unknown function UPF0180~SPTR: Putative uncharacterized protein%3B~PFAM: Uncharacterised protein family (UPF0180) gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2264 Toce_2265 Toce_2265 Toce_2265 2262120 2262416 - conserved hypothetical protein KEGG: aoe:Clos_2863 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2265 Toce_2266 Toce_2266 Toce_2266 2262440 2263327 - diacylglycerol kinase catalytic region COGs: COG1597 Sphingosine kinase~InterPro IPR001206:IPR005218~KEGG: diacylglycerol kinase catalytic region~PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~SPTR: Diacylglycerol kinase catalytic region%3B~PFAM: Diacylglycerol kinase catalytic domain~TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU) gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2266 Toce_2267 Toce_2267 Toce_2267 2263365 2263757 - protein of unknown function DUF583 COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination~InterPro IPR007607~KEGG: tit:Thit_0787 protein of unknown function DUF583~PFAM: protein of unknown function DUF583~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function%2C DUF583 gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2267 Toce_2268 Toce_2268 Toce_2268 2263769 2264683 - Peptidase M23 COGs: COG0739 Membrane protein related to metalloendopeptidase~InterPro IPR016047~KEGG: tte:TTE0841 membrane proteins related to metalloendopeptidase~PFAM: Peptidase M23~SPTR: M23 peptidase domain protein%3B~PFAM: Peptidase family M23 gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2268 Toce_2269 Toce_2269 Toce_2269 2264741 2265283 - conserved hypothetical protein KEGG: cbl:CLK_3121 hypothetical protein~SPTR: Putative uncharacterized protein gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2269 Toce_2270 Toce_2270 Toce_2270 2265308 2266003 - protein of unknown function DUF554 COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump~InterPro IPR007563~KEGG: dhd:Dhaf_4952 protein of unknown function DUF554~PFAM: protein of unknown function DUF554~SPTR: Putative uncharacterized protein%3B~PFAM: Protein of unknown function (DUF554) gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2270 Toce_2271 Toce_2271 Toce_2271 2266030 2267175 - cysteine desulfurase family protein COGs: COG0520 Selenocysteine lyase~InterPro IPR010969:IPR000192~KEGG: tte:TTE2789 selenocysteine lyase~PFAM: aminotransferase class V~SPTR: Selenocysteine lyase%3B~TIGRFAM: cysteine desulfurase family protein~PFAM: Aminotransferase class-V~TIGRFAM: cysteine desulfurase family protein gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2271 Toce_2272 Toce_2272 Toce_2272 2267304 2268584 - Radical SAM domain protein COGs: COG0502 Biotin synthase~InterPro IPR006638:IPR005244:IPR007197~KEGG: amt:Amet_4104 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~SPTR: Radical SAM domain protein%3B~PFAM: Radical SAM superfamily%3B Protein of unknown function (DUF3343) gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2272 Toce_2273 Toce_2273 Toce_2273 2268596 2270026 - iron-only hydrogenase maturation protein HydG COGs: COG1060 Thiamine biosynthesis protein ThiH~InterPro IPR007197:IPR010722~KEGG: tpd:Teth39_1703 thiamine biosynthesis protein ThiH~PFAM: biotin and thiamin synthesis associated%3B Radical SAM domain protein~SPTR: Biotin and thiamin synthesis associated%3B~PFAM: Radical SAM superfamily%3B Biotin and Thiamin Synthesis associated domain~TIGRFAM: thiazole biosynthesis protein ThiH gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2273 Toce_2274 Toce_2274 Toce_2274 2270340 2271200 - methyl-accepting chemotaxis sensory transducer COGs: COG0840 Methyl-accepting chemotaxis protein~InterPro IPR004089:IPR000683~KEGG: tit:Thit_0641 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B oxidoreductase domain protein~SMART: chemotaxis sensory transducer~SPTR: Methyl-accepting chemotaxis sensory transducer%3B~manually curated~PFAM: Oxidoreductase family%2C NAD-binding Rossmann fold%3B Methyl-accepting chemotaxis protein (MCP) signaling domain gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2274 Toce_2275 Toce_2275 Toce_2275 2271270 2272124 - chromosome segregation DNA-binding protein COGs: COG1475 transcriptional regulator protein~InterPro IPR003115:IPR004437~KEGG: tpd:Teth39_2284 ParB-like partition protein~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease~SPTR: ParB-like partition protein%3B~TIGRFAM: parB-like partition protein~PFAM: Helix-turn-helix%3B ParB-like nuclease domain~TIGRFAM: ParB-like partition proteins gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2275 Toce_2276 Toce_2276 Toce_2276 2272117 2272878 - chromosome segregation ATPase COGs: COG1192 ATPase involved in chromosome partitioning~KEGG: cth:Cthe_2377 chromosome segregation ATPase~SPTR: Chromosome segregation ATPase%3B~PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2276 Toce_2277 Toce_2277 Toce_2277 2272992 2273792 - ParB family protein COGs: COG1475 transcriptional regulator protein~InterPro IPR003115:IPR004437~KEGG: tte:TTE2792 transcriptional regulator~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease~SPTR: Predicted Transcriptional regulator%3B~TIGRFAM: parB-like partition protein~PFAM: ParB-like nuclease domain%3B KorB domain~TIGRFAM: ParB-like partition proteins gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2277 Toce_2278 Toce_2278 Toce_2278 2273844 2274596 - methyltransferase GidB COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division~InterPro IPR003682~KEGG: cth:Cthe_2363 methyltransferase GidB~PFAM: glucose inhibited division protein~SPTR: Methyltransferase GidB%3B~TIGRFAM: methyltransferase GidB~PFAM: rRNA small subunit methyltransferase G~TIGRFAM: 16S rRNA methyltransferase GidB gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2278 Toce_2279 Toce_2279 Toce_2279 2274593 2276476 - glucose inhibited division protein A COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division~InterPro IPR020595:IPR004416:IPR013027:IPR002218~KEGG: cth:Cthe_2364 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~PFAM: glucose-inhibited division protein A~SPTR: Glucose inhibited division protein A%3B~TIGRFAM: glucose inhibited division protein A~PFAM: Glucose inhibited division protein A~TIGRFAM: glucose-inhibited division protein A gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2279 Toce_2280 Toce_2280 Toce_2280 2276488 2277876 - tRNA modification GTPase trmE COGs: COG0486 GTPase~InterProIPR004520:IPR006073:IPR005225:IPR018948:IPR 002917~KEGG: gwc:GWCH70_3429 tRNA modification GTPase TrmE~PFAM: GTP-binding protein TrmE-like%3B GTP-binding protein HSR1-related~SPTR: tRNA modification GTPase TrmE%3B~TIGRFAM: tRNA modification GTPase TrmE%3B small GTP-binding protein~PFAM: GTPase of unknown function%3B GTP-binding protein TrmE N-terminus~TIGRFAM: tRNA modification GTPase TrmE%3B small GTP-binding protein domain gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2280 Toce_2281 Toce_2281 Toce_2281 2277909 2278541 - single-stranded nucleic acid binding R3H domain protein COGs: COG1847 RNA-binding protein~InterPro IPR001374:IPR004087~KEGG: pth:PTH_2918 RNA binding protein~PFAM: single-stranded nucleic acid binding R3H domain protein~SMART: single-stranded nucleic acid binding R3H domain protein%3B KH domain protein~SPTR: Predicted RNA binding protein%3B~PFAM: R3H domain gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2281 Toce_2282 Toce_2282 Toce_2282 2278543 2279172 - membrane protein insertase%2C YidC/Oxa1 family COGs: COG0706 Preprotein translocase subunit YidC~InterPro IPR001708:IPR020001~KEGG: tpd:Teth39_2292 60 kDa inner membrane insertion protein~PFAM: 60 kDa inner membrane insertion protein~SPTR: 60 kDa inner membrane insertion protein%3B~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family~PFAM: 60Kd inner membrane protein~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family%2C C-terminal domain gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2282 Toce_2283 Toce_2283 Toce_2283 2279236 2279451 - protein of unknown function DUF37 COGs: COG0759 conserved hypothetical protein~InterPro IPR002696~KEGG: dtu:Dtur_0120 protein of unknown function DUF37~PFAM: protein of unknown function DUF37~SPTR: Putative uncharacterized protein%3B~PFAM: Domain of unknown function DUF37~TIGRFAM: conserved hypothetical protein TIGR00278 gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2283 Toce_2284 Toce_2284 Toce_2284 2279441 2279791 - ribonuclease P protein component COGs: COG0594 RNase P protein component~InterPro IPR000100~KEGG: cth:Cthe_2369 ribonuclease P~PFAM: ribonuclease P protein~SPTR: Ribonuclease P protein component%3B~TIGRFAM: ribonuclease P protein component~PFAM: Ribonuclease P~TIGRFAM: ribonuclease P protein component%2C eubacterial gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2284 Toce_2285 Toce_2285 Toce_2285 2279848 2279982 - LSU ribosomal protein L34P InterPro IPR000271~KEGG: tte:TTE2802 50S ribosomal protein L34~PFAM: ribosomal protein L34~SPTR: 50S ribosomal protein L34%3B~TIGRFAM: ribosomal protein L34~manually curated~PFAM: Ribosomal protein L34~TIGRFAM: ribosomal protein L34%2C bacterial type gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_2285 Toce_R0001 Toce_R0001 Toce_R0001 159043 160550 + 16S ribosomal RNA rRNA gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0001 Toce_R0002 Toce_R0002 Toce_R0002 160665 163627 + 23S ribosomal RNA rRNA gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0002 Toce_R0003 Toce_R0003 Toce_R0003 163724 163838 + 5S ribosomal RNA rRNA gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0003 Toce_R0004 Toce_R0004 Toce_R0004 166205 167712 + 16S ribosomal RNA rRNA gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0004 Toce_R0005 Toce_R0005 Toce_R0005 167827 170789 + 23S ribosomal RNA rRNA gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0005 Toce_R0006 Toce_R0006 Toce_R0006 170886 171000 + 5S ribosomal RNA rRNA gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0006 Toce_R0007 Toce_R0007 Toce_R0007 183038 183112 + tRNA-Thr tRNA gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0007 Toce_R0008 Toce_R0008 Toce_R0008 231884 231961 - tRNA-Arg tRNA gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0008 Toce_R0009 Toce_R0009 Toce_R0009 399408 400154 + short-chain dehydrogenase/reductase SDR COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)~InterPro IPR020904:IPR002198:IPR002347~KEGG: chy:CHY_1186 short chain dehydrogenase/reductase family oxidoreductase~PFAM: short-chain dehydrogenase/reductase SDR~SPTR: Oxidoreductase%2C short chain dehydrogenase/reductase family%3B~tmRNA as predicted by Rfam (RF00023)%2C score 216.66~PFAM: short chain dehydrogenase gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0009 Toce_R0010 Toce_R0010 Toce_R0010 765398 765488 + tRNA-Sec tRNA gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0010 Toce_R0011 Toce_R0011 Toce_R0011 927050 927353 + RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 258.41 gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0011 Toce_R0012 Toce_R0012 Toce_R0012 931368 931444 - tRNA-Pro tRNA gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0012 Toce_R0013 Toce_R0013 Toce_R0013 973201 973277 + tRNA-Pro tRNA gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0013 Toce_R0014 Toce_R0014 Toce_R0014 1134757 1134832 - tRNA-Lys tRNA gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0014 Toce_R0015 Toce_R0015 Toce_R0015 1134843 1134928 - tRNA-Tyr tRNA gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0015 Toce_R0016 Toce_R0016 Toce_R0016 1134938 1135013 - tRNA-Thr tRNA gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0016 Toce_R0017 Toce_R0017 Toce_R0017 1135019 1135095 - tRNA-Met tRNA gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0017 Toce_R0018 Toce_R0018 Toce_R0018 1149564 1149639 - tRNA-Trp tRNA gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0018 Toce_R0019 Toce_R0019 Toce_R0019 1315099 1315282 - 6S RNA 6S / SsrS RNA as predicted by Rfam (RF00013)%2C score 102.88 ncRNA gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0019 Toce_R0020 Toce_R0020 Toce_R0020 1344811 1344885 - tRNA-Asn tRNA gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0020 Toce_R0021 Toce_R0021 Toce_R0021 1344919 1345033 - 5S ribosomal RNA rRNA gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0021 Toce_R0022 Toce_R0022 Toce_R0022 1345151 1348113 - 23S ribosomal RNA rRNA gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0022 Toce_R0023 Toce_R0023 Toce_R0023 1348175 1348251 - tRNA-Ile tRNA gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0023 Toce_R0024 Toce_R0024 Toce_R0024 1348280 1348355 - tRNA-Ala tRNA gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0024 Toce_R0025 Toce_R0025 Toce_R0025 1348418 1349925 - 16S ribosomal RNA rRNA gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0025 Toce_R0026 Toce_R0026 Toce_R0026 1378873 1378947 - tRNA-Val tRNA gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0026 Toce_R0027 Toce_R0027 Toce_R0027 1381807 1381895 - tRNA-Leu tRNA gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0027 Toce_R0028 Toce_R0028 Toce_R0028 1381924 1381997 - tRNA-Cys tRNA gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0028 Toce_R0029 Toce_R0029 Toce_R0029 1382012 1382086 - tRNA-Gly tRNA gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0029 Toce_R0030 Toce_R0030 Toce_R0030 1382094 1382169 - tRNA-Phe tRNA gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0030 Toce_R0031 Toce_R0031 Toce_R0031 1382180 1382256 - tRNA-Asp tRNA gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0031 Toce_R0032 Toce_R0032 Toce_R0032 1382268 1382343 - tRNA-Val tRNA gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0032 Toce_R0033 Toce_R0033 Toce_R0033 1439487 1439574 - tRNA-Leu tRNA gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0033 Toce_R0034 Toce_R0034 Toce_R0034 1637631 1637718 + tRNA-Leu tRNA gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0034 Toce_R0035 Toce_R0035 Toce_R0035 1642958 1643045 + tRNA-Leu tRNA gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0035 Toce_R0036 Toce_R0036 Toce_R0036 1771334 1771417 - tRNA-Leu tRNA gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0036 Toce_R0037 Toce_R0037 Toce_R0037 1771419 1771494 - tRNA-Lys tRNA gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0037 Toce_R0038 Toce_R0038 Toce_R0038 1771499 1771572 - tRNA-Gln tRNA gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0038 Toce_R0039 Toce_R0039 Toce_R0039 1771587 1771663 - tRNA-His tRNA gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0039 Toce_R0040 Toce_R0040 Toce_R0040 1771670 1771746 - tRNA-Arg tRNA gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0040 Toce_R0041 Toce_R0041 Toce_R0041 1771750 1771825 - tRNA-Gly tRNA gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0041 Toce_R0042 Toce_R0042 Toce_R0042 1771833 1771909 - tRNA-Pro tRNA gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0042 Toce_R0043 Toce_R0043 Toce_R0043 1794388 1794463 - tRNA-Ala tRNA gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0043 Toce_R0044 Toce_R0044 Toce_R0044 1794485 1794560 - tRNA-Val tRNA gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0044 Toce_R0045 Toce_R0045 Toce_R0045 1794570 1794645 - tRNA-Ala tRNA gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0045 Toce_R0046 Toce_R0046 Toce_R0046 1817988 1818061 + tRNA-Gln tRNA gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0046 Toce_R0047 Toce_R0047 Toce_R0047 1818063 1818138 + tRNA-Glu tRNA gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0047 Toce_R0048 Toce_R0048 Toce_R0048 2108357 2108431 - tRNA-Glu tRNA gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0048 Toce_R0049 Toce_R0049 Toce_R0049 2108437 2108513 - tRNA-Met tRNA gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0049 Toce_R0050 Toce_R0050 Toce_R0050 2108526 2108602 - tRNA-Met tRNA gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0050 Toce_R0051 Toce_R0051 Toce_R0051 2115137 2115212 - tRNA-Thr tRNA gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0051 Toce_R0052 Toce_R0052 Toce_R0052 2115217 2115293 - tRNA-Met tRNA gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0052 Toce_R0053 Toce_R0053 Toce_R0053 2115306 2115381 - tRNA-Gly tRNA gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0053 Toce_R0054 Toce_R0054 Toce_R0054 2115387 2115472 - tRNA-Tyr tRNA gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0054 Toce_R0055 Toce_R0055 Toce_R0055 2150866 2150983 - RNA component of signal recognition particle gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0055 Toce_R0056 Toce_R0056 Toce_R0056 2153784 2153878 - tRNA-Ser tRNA gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0056 Toce_R0057 Toce_R0057 Toce_R0057 2153892 2153982 - tRNA-Ser tRNA gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0057 Toce_R0058 Toce_R0058 Toce_R0058 2154473 2154549 - tRNA-Arg tRNA gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0058 Toce_R0059 Toce_R0059 Toce_R0059 2154568 2154644 - tRNA-Arg tRNA gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0059 Toce_R0060 Toce_R0060 Toce_R0060 2154650 2154745 - tRNA-Ser tRNA gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0060 Toce_R0061 Toce_R0061 Toce_R0061 2154756 2154842 - tRNA-Ser tRNA gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0061 Toce_R0062 Toce_R0062 Toce_R0062 2247596 2247670 - tRNA-Gly tRNA gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0062 Toce_R0063 Toce_R0063 Toce_R0063 2247733 2247807 - tRNA-Glu tRNA gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0063 Toce_R0064 Toce_R0064 Toce_R0064 2247815 2247890 - tRNA-Lys tRNA gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=Toce_R0064