THA_100 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1003 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1004 SM00267 diguanylate cyclase THA_1007 SM00642 Alpha-amylase domain THA_1008 SM00853 MutL C terminal dimerisation domain THA_1008 SM01340 THA_1008 THA_1009 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_1016 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_1016 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THA_1017 SM00382 ATPases associated with a variety of cellular activities THA_1018 SM00382 ATPases associated with a variety of cellular activities THA_1026 SM00881 CoA binding domain THA_103 SM00909 Sporulation and spore germination THA_1035 SM00965 Secretin and TonB N terminus short domain THA_1049 SM00267 diguanylate cyclase THA_1079 SM01004 Delta-aminolevulinic acid dehydratase THA_1085 SM00382 ATPases associated with a variety of cellular activities THA_1094 SM01018 B12 binding domain THA_1108 SM00100 Cyclic nucleotide-monophosphate binding domain THA_1108 SM00419 helix_turn_helix, cAMP Regulatory protein THA_1109 SM00052 Putative diguanylate phosphodiesterase THA_1109 SM00091 PAS domain THA_1109 SM00267 diguanylate cyclase THA_1110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_1111 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THA_1115 SM00028 Tetratricopeptide repeats THA_1121 SM00382 ATPases associated with a variety of cellular activities THA_1124 SM00363 S4 RNA-binding domain THA_1133 SM00382 ATPases associated with a variety of cellular activities THA_114 SM00382 ATPases associated with a variety of cellular activities THA_114 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain THA_114 SM00437 Bacterial DNA topoisomerase I DNA-binding domain THA_114 SM00487 DEAD-like helicases superfamily THA_114 SM00490 helicase superfamily c-terminal domain THA_114 SM00493 THA_114 THA_1142 SM00870 THA_1142 THA_1147 SM00968 SMC proteins Flexible Hinge Domain THA_1159 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_1159 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THA_1166 SM00278 Helix-hairpin-helix DNA-binding motif class 1 THA_1171 SM00387 Histidine kinase-like ATPases THA_1173 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain THA_1176 SM00845 GatB domain THA_1178 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_118 SM00387 Histidine kinase-like ATPases THA_118 SM00388 His Kinase A (phosphoacceptor) domain THA_1185 SM00267 diguanylate cyclase THA_1188 SM00363 S4 RNA-binding domain THA_119 SM00448 cheY-homologous receiver domain THA_119 SM00862 Transcriptional regulatory protein, C terminal THA_1190 SM00073 Histidine Phosphotransfer domain THA_1190 SM00260 Two component signalling adaptor domain THA_1190 SM00387 Histidine kinase-like ATPases THA_1190 SM01231 THA_1190 THA_1191 SM00260 Two component signalling adaptor domain THA_1192 SM00448 cheY-homologous receiver domain THA_1207 SM00363 S4 RNA-binding domain THA_121 SM00382 ATPases associated with a variety of cellular activities THA_1212 SM00838 Elongation factor G C-terminus THA_1212 SM00889 Elongation factor G, domain IV THA_1214 SM01403 THA_1214 THA_1218 SM01382 THA_1218 THA_1218 SM01383 THA_1218 THA_1221 SM00322 K homology RNA-binding domain THA_1225 SM01374 THA_1225 THA_1226 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. THA_1238 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1241 SM00363 S4 RNA-binding domain THA_1241 SM01390 THA_1241 THA_1242 SM00662 RNA polymerases D THA_1248 SM00138 Methyltransferase, chemotaxis proteins THA_1251 SM01230 THA_1251 THA_1257 SM00487 DEAD-like helicases superfamily THA_1257 SM00490 helicase superfamily c-terminal domain THA_1264 SM00507 HNH nucleases THA_127 SM00347 helix_turn_helix multiple antibiotic resistance protein THA_1272 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1275 SM00533 DNA-binding domain of DNA mismatch repair MUTS family THA_1275 SM00534 ATPase domain of DNA mismatch repair MUTS family THA_1279 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1290 SM00872 Alpha mannosidase, middle domain THA_1291 SM00345 helix_turn_helix gluconate operon transcriptional repressor THA_1295 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins THA_130 SM00822 THA_130 THA_1304 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain THA_1304 SM00437 Bacterial DNA topoisomerase I DNA-binding domain THA_1304 SM00493 THA_1304 THA_1305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1306 SM01005 Alanine racemase, C-terminal domain THA_1310 SM00493 THA_1310 THA_1319 SM00479 THA_1319 THA_1319 SM00481 DNA polymerase alpha chain like domain THA_1323 SM00382 ATPases associated with a variety of cellular activities THA_1324 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1331 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1337 SM00448 cheY-homologous receiver domain THA_1337 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1338 SM00387 Histidine kinase-like ATPases THA_134 SM00448 cheY-homologous receiver domain THA_134 SM00862 Transcriptional regulatory protein, C terminal THA_1340 SM00062 Bacterial periplasmic substrate-binding proteins THA_1344 SM00663 RNA polymerase I subunit A N-terminus THA_1349 SM00028 Tetratricopeptide repeats THA_135 SM00387 Histidine kinase-like ATPases THA_135 SM00388 His Kinase A (phosphoacceptor) domain THA_1351 SM00028 Tetratricopeptide repeats THA_1353 SM00382 ATPases associated with a variety of cellular activities THA_1356 SM00478 endonuclease III THA_1358 SM00851 MGS-like domain THA_136 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain THA_1368 SM00480 DNA polymerase III beta subunit THA_1370 SM00382 ATPases associated with a variety of cellular activities THA_1375 SM01160 THA_1375 THA_1378 SM00257 Lysin motif THA_1380 SM00642 Alpha-amylase domain THA_1393 SM00382 ATPases associated with a variety of cellular activities THA_1394 SM00382 ATPases associated with a variety of cellular activities THA_1401 SM00382 ATPases associated with a variety of cellular activities THA_1405 SM00530 Helix-turn-helix XRE-family like proteins THA_1411 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1414 SM00382 ATPases associated with a variety of cellular activities THA_142 SM00267 diguanylate cyclase THA_1422 SM00957 SecA DEAD-like domain THA_1422 SM00958 SecA preprotein cross-linking domain THA_143 SM00487 DEAD-like helicases superfamily THA_143 SM00490 helicase superfamily c-terminal domain THA_1439 SM00345 helix_turn_helix gluconate operon transcriptional repressor THA_1441 SM00882 Coenzyme A transferase THA_1442 SM00882 Coenzyme A transferase THA_1450 SM00448 cheY-homologous receiver domain THA_1452 SM00387 Histidine kinase-like ATPases THA_1452 SM00448 cheY-homologous receiver domain THA_1454 SM00138 Methyltransferase, chemotaxis proteins THA_1459 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1462 SM00382 ATPases associated with a variety of cellular activities THA_1464 SM00322 K homology RNA-binding domain THA_1464 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1472 SM01211 THA_1472 THA_1475 SM01001 AIR carboxylase THA_1480 SM00849 Metallo-beta-lactamase superfamily THA_1482 SM00014 Acid phosphatase homologues THA_1492 SM00267 diguanylate cyclase THA_1495 SM00829 Enoylreductase THA_1498 SM00563 Phosphate acyltransferases THA_150 SM00487 DEAD-like helicases superfamily THA_150 SM00490 helicase superfamily c-terminal domain THA_150 SM00982 THA_150 THA_150 SM01058 CarD-like/TRCF domain THA_1501 SM00382 ATPases associated with a variety of cellular activities THA_1503 SM00345 helix_turn_helix gluconate operon transcriptional repressor THA_1511 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1513 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1525 SM00363 S4 RNA-binding domain THA_1527 SM00382 ATPases associated with a variety of cellular activities THA_1529 SM00382 ATPases associated with a variety of cellular activities THA_1530 SM00382 ATPases associated with a variety of cellular activities THA_1546 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor THA_1547 SM00998 Adenylosuccinate lyase C-terminus THA_1548 SM00382 ATPases associated with a variety of cellular activities THA_1550 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1553 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1554 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THA_1556 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THA_156 SM01007 Class II Aldolase and Adducin N-terminal domain THA_1560 SM01221 THA_1560 THA_1560 SM01222 THA_1560 THA_1566 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1572 SM00434 DNA Topoisomerase IV THA_1577 SM00354 helix_turn _helix lactose operon repressor THA_1578 SM01038 Beta galactosidase small chain THA_1583 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1587 SM00849 Metallo-beta-lactamase superfamily THA_1591 SM00965 Secretin and TonB N terminus short domain THA_1592 SM00965 Secretin and TonB N terminus short domain THA_1604 SM00448 cheY-homologous receiver domain THA_1607 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THA_1610 SM00382 ATPases associated with a variety of cellular activities THA_1615 SM00842 Cell division protein FtsA THA_1616 SM00864 Tubulin/FtsZ family, GTPase domain THA_1616 SM00865 Tubulin/FtsZ family, C-terminal domain THA_1617 SM00382 ATPases associated with a variety of cellular activities THA_162 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_1622 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain THA_163 SM00849 Metallo-beta-lactamase superfamily THA_1630 SM00838 Elongation factor G C-terminus THA_1630 SM00889 Elongation factor G, domain IV THA_1641 SM00382 ATPases associated with a variety of cellular activities THA_1644 SM00116 Domain in cystathionine beta-synthase and other proteins. THA_1648 SM00849 Metallo-beta-lactamase superfamily THA_1650 SM00382 ATPases associated with a variety of cellular activities THA_1656 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1656 SM00954 Region found in RelA / SpoT proteins THA_1660 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain THA_1662 SM01092 CO dehydrogenase flavoprotein C-terminal domain THA_1663 SM01092 CO dehydrogenase flavoprotein C-terminal domain THA_1666 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1668 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain THA_1671 SM00244 prohibitin homologues THA_1681 SM00984 UDP binding domain THA_1697 SM00881 CoA binding domain THA_170 SM00859 Semialdehyde dehydrogenase, NAD binding domain THA_1701 SM00257 Lysin motif THA_1703 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1708 SM00028 Tetratricopeptide repeats THA_1709 SM00357 Cold shock protein domain THA_1709 SM00382 ATPases associated with a variety of cellular activities THA_1709 SM00959 Rho termination factor, N-terminal domain THA_1711 SM00937 THA_1711 THA_1712 SM00382 ATPases associated with a variety of cellular activities THA_1713 SM00382 ATPases associated with a variety of cellular activities THA_1718 SM00518 AP endonuclease family 2 THA_172 SM01130 THA_172 THA_1727 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1742 SM00116 Domain in cystathionine beta-synthase and other proteins. THA_1754 SM00382 ATPases associated with a variety of cellular activities THA_1754 SM00962 SRP54-type protein, GTPase domain THA_1766 SM00967 RNA 2'-O ribose methyltransferase substrate binding THA_1767 SM00448 cheY-homologous receiver domain THA_1767 SM00862 Transcriptional regulatory protein, C terminal THA_1770 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1770 SM00955 THA_1770 THA_1772 SM00278 Helix-hairpin-helix DNA-binding motif class 1 THA_1772 SM00292 breast cancer carboxy-terminal domain THA_1772 SM00532 Ligase N family THA_1776 SM00116 Domain in cystathionine beta-synthase and other proteins. THA_1776 SM01091 Transporter associated domain THA_1777 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1780 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1785 SM00387 Histidine kinase-like ATPases THA_1785 SM00388 His Kinase A (phosphoacceptor) domain THA_1786 SM00836 DALR anticodon binding domain THA_1786 SM01016 Arginyl tRNA synthetase N terminal dom THA_1788 SM00382 ATPases associated with a variety of cellular activities THA_1788 SM00464 Found in ATP-dependent protease La (LON) THA_1792 SM00825 Beta-ketoacyl synthase THA_1796 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. THA_1804 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1804 SM00876 Biotin and Thiamin Synthesis associated domain THA_1806 SM00876 Biotin and Thiamin Synthesis associated domain THA_1808 SM00902 Iron hydrogenase small subunit THA_1808 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THA_1811 SM00358 Double-stranded RNA binding motif THA_1819 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1819 SM00322 K homology RNA-binding domain THA_1821 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1822 SM00382 ATPases associated with a variety of cellular activities THA_1822 SM01086 C-terminal, D2-small domain, of ClpB protein THA_1829 SM00316 Ribosomal protein S1-like RNA-binding domain THA_1833 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_1837 SM00393 Putative single-stranded nucleic acids-binding domain THA_1837 SM01245 THA_1837 THA_1840 SM00320 WD40 repeats THA_1840 SM00564 beta-propeller repeat THA_1841 SM01230 THA_1841 THA_1842 SM00267 diguanylate cyclase THA_1842 SM00448 cheY-homologous receiver domain THA_1844 SM00487 DEAD-like helicases superfamily THA_1844 SM00490 helicase superfamily c-terminal domain THA_1847 SM00382 ATPases associated with a variety of cellular activities THA_185 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase THA_1857 SM00481 DNA polymerase alpha chain like domain THA_186 SM00564 beta-propeller repeat THA_1861 SM00267 diguanylate cyclase THA_1864 SM00347 helix_turn_helix multiple antibiotic resistance protein THA_1871 SM00382 ATPases associated with a variety of cellular activities THA_1878 SM00851 MGS-like domain THA_1882 SM00937 THA_1882 THA_1888 SM00382 ATPases associated with a variety of cellular activities THA_1888 SM00962 SRP54-type protein, GTPase domain THA_1888 SM00963 SRP54-type protein, helical bundle domain THA_1890 SM00257 Lysin motif THA_1897 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_1905 SM00900 THA_1905 THA_1912 SM00116 Domain in cystathionine beta-synthase and other proteins. THA_1912 SM01240 THA_1912 THA_1915 SM00642 Alpha-amylase domain THA_1939 SM00354 helix_turn _helix lactose operon repressor THA_194 SM00382 ATPases associated with a variety of cellular activities THA_1942 SM01217 THA_1942 THA_1944 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain THA_1945 SM00460 Transglutaminase/protease-like homologues THA_1946 SM00419 helix_turn_helix, cAMP Regulatory protein THA_1957 SM00487 DEAD-like helicases superfamily THA_1966 SM00354 helix_turn _helix lactose operon repressor THA_1973 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor THA_1982 SM01117 THA_1982 THA_1988 SM00382 ATPases associated with a variety of cellular activities THA_200 SM01323 THA_200 THA_2005 SM01321 THA_2005 THA_2014 SM01321 THA_2014 THA_2027 SM01321 THA_2027 THA_211 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs THA_211 SM00474 3'-5' exonuclease THA_211 SM00475 5'-3' exonuclease THA_211 SM00482 DNA polymerase A domain THA_213 SM00842 Cell division protein FtsA THA_214 SM00382 ATPases associated with a variety of cellular activities THA_214 SM00463 Small MutS-related domain THA_214 SM00533 DNA-binding domain of DNA mismatch repair MUTS family THA_214 SM00534 ATPase domain of DNA mismatch repair MUTS family THA_224 SM00382 ATPases associated with a variety of cellular activities THA_224 SM00760 Bacterial dnaA protein helix-turn-helix domain THA_228 SM00382 ATPases associated with a variety of cellular activities THA_237 SM00382 ATPases associated with a variety of cellular activities THA_238 SM00382 ATPases associated with a variety of cellular activities THA_238 SM01086 C-terminal, D2-small domain, of ClpB protein THA_239 SM00481 DNA polymerase alpha chain like domain THA_249 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_250 SM00487 DEAD-like helicases superfamily THA_250 SM00490 helicase superfamily c-terminal domain THA_251 SM00382 ATPases associated with a variety of cellular activities THA_252 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain THA_263 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_263 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THA_268 SM00382 ATPases associated with a variety of cellular activities THA_27 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain THA_270 SM00883 Chaperonin 10 Kd subunit THA_279 SM01387 THA_279 THA_281 SM00840 THA_281 THA_288 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_295 SM00849 Metallo-beta-lactamase superfamily THA_296 SM00091 PAS domain THA_296 SM00382 ATPases associated with a variety of cellular activities THA_30 SM00382 ATPases associated with a variety of cellular activities THA_304 SM00271 DnaJ molecular chaperone homology domain THA_31 SM00382 ATPases associated with a variety of cellular activities THA_327 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_330 SM01409 THA_330 THA_331 SM00072 Guanylate kinase homologues. THA_34 SM00465 GIY-YIG type nucleases (URI domain) THA_359 SM00382 ATPases associated with a variety of cellular activities THA_364 SM00563 Phosphate acyltransferases THA_365 SM00981 THA_365 THA_371 SM00382 ATPases associated with a variety of cellular activities THA_372 SM00382 ATPases associated with a variety of cellular activities THA_373 SM00347 helix_turn_helix multiple antibiotic resistance protein THA_386 SM00382 ATPases associated with a variety of cellular activities THA_388 SM00506 Appr-1"-p processing enzyme THA_389 SM00382 ATPases associated with a variety of cellular activities THA_39 SM00899 THA_39 THA_391 SM00529 Helix-turn-helix diphteria tox regulatory element THA_392 SM00986 Uracil DNA glycosylase superfamily THA_392 SM00987 UreE urease accessory protein, C-terminal domain THA_396 SM01400 THA_396 THA_4 SM00487 DEAD-like helicases superfamily THA_4 SM00490 helicase superfamily c-terminal domain THA_405 SM01192 THA_405 THA_405 SM01193 THA_405 THA_41 SM00278 Helix-hairpin-helix DNA-binding motif class 1 THA_410 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_419 SM00257 Lysin motif THA_427 SM00534 ATPase domain of DNA mismatch repair MUTS family THA_432 SM00382 ATPases associated with a variety of cellular activities THA_438 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_440 SM00382 ATPases associated with a variety of cellular activities THA_441 SM00977 TilS substrate C-terminal domain THA_458 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THA_458 SM00245 tail specific protease THA_466 SM00155 Phospholipase D. Active site motifs. THA_467 SM00838 Elongation factor G C-terminus THA_471 SM00650 Ribosomal RNA adenine dimethylases THA_477 SM01133 THA_477 THA_484 SM01120 THA_484 THA_484 SM01121 THA_484 THA_486 SM00861 Transketolase, pyrimidine binding domain THA_489 SM00098 Alkaline phosphatase homologues THA_497 SM00382 ATPases associated with a variety of cellular activities THA_50 SM00382 ATPases associated with a variety of cellular activities THA_501 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THA_502 SM00267 diguanylate cyclase THA_504 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_511 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family THA_514 SM00316 Ribosomal protein S1-like RNA-binding domain THA_514 SM00732 Likely ribonuclease with RNase H fold. THA_515 SM00260 Two component signalling adaptor domain THA_516 SM00487 DEAD-like helicases superfamily THA_516 SM00490 helicase superfamily c-terminal domain THA_52 SM00903 Flavin reductase like domain THA_527 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. THA_527 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. THA_53 SM00861 Transketolase, pyrimidine binding domain THA_531 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain THA_531 SM01080 THA_531 THA_537 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_537 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THA_544 SM00849 Metallo-beta-lactamase superfamily THA_546 SM00788 Adenylosuccinate synthetase THA_548 SM00028 Tetratricopeptide repeats THA_549 SM00823 Phosphopantetheine attachment site THA_550 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase THA_554 SM00487 DEAD-like helicases superfamily THA_556 SM00387 Histidine kinase-like ATPases THA_556 SM00388 His Kinase A (phosphoacceptor) domain THA_56 SM00478 endonuclease III THA_560 SM00732 Likely ribonuclease with RNase H fold. THA_571 SM00382 ATPases associated with a variety of cellular activities THA_576 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. THA_576 SM00091 PAS domain THA_576 SM00387 Histidine kinase-like ATPases THA_576 SM00388 His Kinase A (phosphoacceptor) domain THA_582 SM00357 Cold shock protein domain THA_583 SM00834 Putative regulatory protein THA_588 SM00904 Riboflavin kinase THA_589 SM00478 endonuclease III THA_597 SM00382 ATPases associated with a variety of cellular activities THA_6 SM00487 DEAD-like helicases superfamily THA_6 SM00490 helicase superfamily c-terminal domain THA_612 SM00448 cheY-homologous receiver domain THA_612 SM00850 LytTr DNA-binding domain THA_618 SM01359 THA_618 THA_618 SM01360 THA_618 THA_623 SM00267 diguanylate cyclase THA_626 SM00267 diguanylate cyclase THA_631 SM00649 Ribosomal protein L11/L12 THA_632 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. THA_632 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. THA_647 SM00244 prohibitin homologues THA_648 SM00244 prohibitin homologues THA_649 SM00116 Domain in cystathionine beta-synthase and other proteins. THA_65 SM00382 ATPases associated with a variety of cellular activities THA_65 SM00962 SRP54-type protein, GTPase domain THA_65 SM00963 SRP54-type protein, helical bundle domain THA_651 SM00382 ATPases associated with a variety of cellular activities THA_651 SM00994 ClpX C4-type zinc finger THA_651 SM01086 C-terminal, D2-small domain, of ClpB protein THA_655 SM00382 ATPases associated with a variety of cellular activities THA_658 SM00267 diguanylate cyclase THA_666 SM00318 Staphylococcal nuclease homologues THA_670 SM00382 ATPases associated with a variety of cellular activities THA_673 SM00354 helix_turn _helix lactose operon repressor THA_686 SM00382 ATPases associated with a variety of cellular activities THA_686 SM01086 C-terminal, D2-small domain, of ClpB protein THA_697 SM00900 THA_697 THA_703 SM01207 THA_703 THA_71 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. THA_710 SM00267 diguanylate cyclase THA_711 SM00382 ATPases associated with a variety of cellular activities THA_711 SM01086 C-terminal, D2-small domain, of ClpB protein THA_715 SM00363 S4 RNA-binding domain THA_72 SM00028 Tetratricopeptide repeats THA_722 SM00411 bacterial (prokaryotic) histone like domain THA_727 SM00382 ATPases associated with a variety of cellular activities THA_731 SM00893 Electron transfer flavoprotein domain THA_732 SM00893 Electron transfer flavoprotein domain THA_738 SM00798 AICARFT/IMPCHase bienzyme THA_739 SM01209 THA_739 THA_739 SM01210 THA_739 THA_749 SM00347 helix_turn_helix multiple antibiotic resistance protein THA_752 SM00382 ATPases associated with a variety of cellular activities THA_764 SM00849 Metallo-beta-lactamase superfamily THA_772 SM00382 ATPases associated with a variety of cellular activities THA_773 SM00382 ATPases associated with a variety of cellular activities THA_776 SM00354 helix_turn _helix lactose operon repressor THA_778 SM00562 THA_778 THA_784 SM00331 Sigma factor PP2C-like phosphatases THA_786 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THA_787 SM00902 Iron hydrogenase small subunit THA_787 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THA_788 SM00881 CoA binding domain THA_799 SM00670 Large family of predicted nucleotide-binding domains THA_800 SM00479 THA_800 THA_821 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_822 SM00382 ATPases associated with a variety of cellular activities THA_825 SM00098 Alkaline phosphatase homologues THA_826 SM00382 ATPases associated with a variety of cellular activities THA_834 SM00448 cheY-homologous receiver domain THA_835 SM00642 Alpha-amylase domain THA_836 SM00642 Alpha-amylase domain THA_84 SM00529 Helix-turn-helix diphteria tox regulatory element THA_841 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_883 SM00984 UDP binding domain THA_898 SM00481 DNA polymerase alpha chain like domain THA_911 SM00387 Histidine kinase-like ATPases THA_911 SM00433 TopoisomeraseII THA_914 SM00729 Elongator protein 3, MiaB family, Radical SAM THA_915 SM00116 Domain in cystathionine beta-synthase and other proteins. THA_92 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_92 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain THA_931 SM00873 B3/4 domain THA_931 SM00874 tRNA synthetase B5 domain THA_931 SM00896 Ferredoxin-fold anticodon binding domain THA_933 SM00028 Tetratricopeptide repeats THA_933 SM00671 Sel1-like repeats. THA_935 SM01207 THA_935 THA_94 SM00448 cheY-homologous receiver domain THA_944 SM00267 diguanylate cyclase THA_945 SM01228 THA_945 THA_949 SM00642 Alpha-amylase domain THA_958 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). THA_964 SM00841 Elongation factor P, C-terminal THA_964 SM01185 THA_964 THA_965 SM00331 Sigma factor PP2C-like phosphatases THA_966 SM00448 cheY-homologous receiver domain THA_969 SM00382 ATPases associated with a variety of cellular activities THA_970 SM00935 Outer membrane protein (OmpH-like) THA_971 SM00487 DEAD-like helicases superfamily THA_971 SM00490 helicase superfamily c-terminal domain THA_977 SM00382 ATPases associated with a variety of cellular activities THA_979 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor THA_99 SM00996 S-adenosyl-L-homocysteine hydrolase THA_99 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THA_992 SM00481 DNA polymerase alpha chain like domain THA_994 SM00852 Probable molybdopterin binding domain THA_995 SM00354 helix_turn _helix lactose operon repressor