locus-tag class description BW47_00005 PF11638 DnaA N-terminal domain BW47_00005 PF08299 Bacterial dnaA protein helix-turn-helix BW47_00005 PF00308 Bacterial dnaA protein BW47_00015 PF00005 ABC transporter BW47_00015 PF00664 ABC transporter transmembrane region BW47_00025 PF00664 ABC transporter transmembrane region BW47_00025 PF00005 ABC transporter BW47_00030 PF00005 ABC transporter BW47_00030 PF00664 ABC transporter transmembrane region BW47_00040 PF00005 ABC transporter BW47_00040 PF00664 ABC transporter transmembrane region BW47_00060 PF00005 ABC transporter BW47_00070 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_00070 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BW47_00100 PF00171 Aldehyde dehydrogenase family BW47_00140 PF02592 Putative vitamin uptake transporter BW47_00145 PF02645 Uncharacterised protein, DegV family COG1307 BW47_00150 PF18073 Rubredoxin metal binding domain BW47_00155 PF00004 ATPase family associated with various cellular activities (AAA) BW47_00155 PF10431 C-terminal, D2-small domain, of ClpB protein BW47_00155 PF17871 AAA lid domain BW47_00155 PF07724 AAA domain (Cdc48 subfamily) BW47_00155 PF02861 Clp amino terminal domain, pathogenicity island component BW47_00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_00195 PF00857 Isochorismatase family BW47_00200 PF04055 Radical SAM superfamily BW47_00200 PF06968 Biotin and Thiamin Synthesis associated domain BW47_00205 PF17191 RecG wedge domain BW47_00205 PF00271 Helicase conserved C-terminal domain BW47_00205 PF00270 DEAD/DEAH box helicase BW47_00210 PF00005 ABC transporter BW47_00215 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BW47_00215 PF04263 Thiamin pyrophosphokinase, catalytic domain BW47_00220 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BW47_00220 PF13288 DXP reductoisomerase C-terminal domain BW47_00220 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BW47_00225 PF01497 Periplasmic binding protein BW47_00230 PF01032 FecCD transport family BW47_00240 PF04542 Sigma-70 region 2 BW47_00240 PF03979 Sigma-70 factor, region 1.1 BW47_00240 PF04545 Sigma-70, region 4 BW47_00240 PF00140 Sigma-70 factor, region 1.2 BW47_00240 PF04539 Sigma-70 region 3 BW47_00260 PF00885 6,7-dimethyl-8-ribityllumazine synthase BW47_00265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BW47_00265 PF00925 GTP cyclohydrolase II BW47_00270 PF00677 Lumazine binding domain BW47_00275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BW47_00275 PF01872 RibD C-terminal domain BW47_00280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_00280 PF02743 Cache domain BW47_00280 PF00672 HAMP domain BW47_00285 PF01592 NifU-like N terminal domain BW47_00290 PF00266 Aminotransferase class-V BW47_00300 PF01458 Uncharacterized protein family (UPF0051) BW47_00305 PF00005 ABC transporter BW47_00310 PF00118 TCP-1/cpn60 chaperonin family BW47_00315 PF00166 Chaperonin 10 Kd subunit BW47_00325 PF00636 Ribonuclease III domain BW47_00335 PF01523 Putative modulator of DNA gyrase BW47_00340 PF01523 Putative modulator of DNA gyrase BW47_00345 PF01168 Alanine racemase, N-terminal domain BW47_00355 PF02547 Queuosine biosynthesis protein BW47_00360 PF00312 Ribosomal protein S15 BW47_00365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BW47_00365 PF04073 Aminoacyl-tRNA editing domain BW47_00365 PF03129 Anticodon binding domain BW47_00370 PF01406 tRNA synthetases class I (C) catalytic domain BW47_00370 PF09190 DALR domain BW47_00375 PF00749 tRNA synthetases class I (E and Q), catalytic domain BW47_00380 PF00860 Permease family BW47_00405 PF04055 Radical SAM superfamily BW47_00405 PF01938 TRAM domain BW47_00405 PF00919 Uncharacterized protein family UPF0004 BW47_00410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BW47_00410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BW47_00415 PF00857 Isochorismatase family BW47_00420 PF01545 Cation efflux family BW47_00435 PF08323 Starch synthase catalytic domain BW47_00435 PF00534 Glycosyl transferases group 1 BW47_00450 PF07478 D-ala D-ala ligase C-terminus BW47_00450 PF01820 D-ala D-ala ligase N-terminus BW47_00460 PF02558 Ketopantoate reductase PanE/ApbA BW47_00460 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain BW47_00465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BW47_00465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BW47_00470 PF05161 MOFRL family BW47_00470 PF13660 Domain of unknown function (DUF4147) BW47_00475 PF02540 NAD synthase BW47_00480 PF00226 DnaJ domain BW47_00480 PF01556 DnaJ C terminal domain BW47_00480 PF00684 DnaJ central domain BW47_00485 PF01025 GrpE BW47_00490 PF01628 HrcA protein C terminal domain BW47_00495 PF07690 Major Facilitator Superfamily BW47_00500 PF02829 3H domain BW47_00500 PF08279 HTH domain BW47_00505 PF03006 Haemolysin-III related BW47_00510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BW47_00520 PF13186 Iron-sulfur cluster-binding domain BW47_00520 PF04055 Radical SAM superfamily BW47_00525 PF05343 M42 glutamyl aminopeptidase BW47_00535 PF01192 RNA polymerase Rpb6 BW47_00540 PF00625 Guanylate kinase BW47_00545 PF04025 Domain of unknown function (DUF370) BW47_00580 PF00871 Acetokinase family BW47_00585 PF01515 Phosphate acetyl/butaryl transferase BW47_00590 PF00871 Acetokinase family BW47_00595 PF00155 Aminotransferase class I and II BW47_00600 PF00266 Aminotransferase class-V BW47_00605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BW47_00605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BW47_00610 PF13722 5TM C-terminal transporter carbon starvation CstA BW47_00610 PF02554 Carbon starvation protein CstA BW47_00615 PF04397 LytTr DNA-binding domain BW47_00615 PF00072 Response regulator receiver domain BW47_00620 PF07694 5TMR of 5TMR-LYT BW47_00620 PF06580 Histidine kinase BW47_00640 PF07687 Peptidase dimerisation domain BW47_00640 PF01546 Peptidase family M20/M25/M40 BW47_00645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BW47_00645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BW47_00650 PF01979 Amidohydrolase family BW47_00655 PF01979 Amidohydrolase family BW47_00660 PF01180 Dihydroorotate dehydrogenase BW47_00690 PF04232 Stage V sporulation protein S (SpoVS) BW47_00695 PF02872 5'-nucleotidase, C-terminal domain BW47_00695 PF00149 Calcineurin-like phosphoesterase BW47_00700 PF00005 ABC transporter BW47_00700 PF00664 ABC transporter transmembrane region BW47_00730 PF02568 Thiamine biosynthesis protein (ThiI) BW47_00730 PF02926 THUMP domain BW47_00745 PF00877 NlpC/P60 family BW47_00745 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain BW47_00750 PF00005 ABC transporter BW47_00750 PF00664 ABC transporter transmembrane region BW47_00755 PF00005 ABC transporter BW47_00755 PF00664 ABC transporter transmembrane region BW47_00760 PF01047 MarR family BW47_00765 PF07703 Alpha-2-macroglobulin bait region domain BW47_00765 PF07678 A-macroglobulin TED domain BW47_00765 PF00207 Alpha-2-macroglobulin family BW47_00765 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BW47_00765 PF01835 MG2 domain BW47_00775 PF06672 Protein of unknown function (DUF1175) BW47_00780 PF00465 Iron-containing alcohol dehydrogenase BW47_00790 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_00790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BW47_00805 PF00672 HAMP domain BW47_00805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_00815 PF01432 Peptidase family M3 BW47_00815 PF08439 Oligopeptidase F BW47_00820 PF01554 MatE BW47_00825 PF00248 Aldo/keto reductase family BW47_00830 PF02073 Thermophilic metalloprotease (M29) BW47_00840 PF00005 ABC transporter BW47_00850 PF01661 Macro domain BW47_00850 PF12002 MgsA AAA+ ATPase C terminal BW47_00850 PF05496 Holliday junction DNA helicase RuvB P-loop domain BW47_00850 PF16193 AAA C-terminal domain BW47_00855 PF01661 Macro domain BW47_00855 PF05496 Holliday junction DNA helicase RuvB P-loop domain BW47_00855 PF16193 AAA C-terminal domain BW47_00855 PF12002 MgsA AAA+ ATPase C terminal BW47_00860 PF16363 GDP-mannose 4,6 dehydratase BW47_00870 PF03167 Uracil DNA glycosylase superfamily BW47_00875 PF00391 PEP-utilising enzyme, mobile domain BW47_00875 PF02896 PEP-utilising enzyme, TIM barrel domain BW47_00875 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BW47_00885 PF12804 MobA-like NTP transferase domain BW47_00885 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_00890 PF14572 Phosphoribosyl synthetase-associated domain BW47_00890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BW47_00895 PF01386 Ribosomal L25p family BW47_00895 PF14693 Ribosomal protein TL5, C-terminal domain BW47_00900 PF01195 Peptidyl-tRNA hydrolase BW47_00925 PF00005 ABC transporter BW47_00925 PF17755 UvrA DNA-binding domain BW47_00925 PF17760 UvrA interaction domain BW47_00930 PF02899 Phage integrase, N-terminal SAM-like domain BW47_00930 PF00589 Phage integrase family BW47_00960 PF00113 Enolase, C-terminal TIM barrel domain BW47_00960 PF03952 Enolase, N-terminal domain BW47_00970 PF00395 S-layer homology domain BW47_00975 PF01479 S4 domain BW47_00975 PF00579 tRNA synthetases class I (W and Y) BW47_00985 PF01938 TRAM domain BW47_00985 PF00919 Uncharacterized protein family UPF0004 BW47_00985 PF04055 Radical SAM superfamily BW47_00990 PF02926 THUMP domain BW47_00990 PF01170 Putative RNA methylase family UPF0020 BW47_00995 PF02641 Uncharacterized ACR, COG1993 BW47_01000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BW47_01010 PF01725 Ham1 family BW47_01015 PF02590 Predicted SPOUT methyltransferase BW47_01030 PF01551 Peptidase family M23 BW47_01030 PF04225 Opacity-associated protein A LysM-like domain BW47_01035 PF03061 Thioesterase superfamily BW47_01040 PF05853 beta-keto acid cleavage enzyme BW47_01050 PF12544 Lysine-2,3-aminomutase BW47_01050 PF04055 Radical SAM superfamily BW47_01055 PF01575 MaoC like domain BW47_01065 PF00488 MutS domain V BW47_01065 PF05190 MutS family domain IV BW47_01065 PF05188 MutS domain II BW47_01065 PF01624 MutS domain I BW47_01065 PF05192 MutS domain III BW47_01070 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit BW47_01075 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase BW47_01075 PF02310 B12 binding domain BW47_01090 PF14489 QueF-like protein BW47_01110 PF00248 Aldo/keto reductase family BW47_01120 PF01915 Glycosyl hydrolase family 3 C-terminal domain BW47_01120 PF00933 Glycosyl hydrolase family 3 N terminal domain BW47_01120 PF14310 Fibronectin type III-like domain BW47_01145 PF17862 AAA+ lid domain BW47_01145 PF00004 ATPase family associated with various cellular activities (AAA) BW47_01145 PF01434 Peptidase family M41 BW47_01150 PF01171 PP-loop family BW47_01150 PF11734 TilS substrate C-terminal domain BW47_01165 PF02673 Bacitracin resistance protein BacA BW47_01170 PF01979 Amidohydrolase family BW47_01185 PF02545 Maf-like protein BW47_01190 PF04002 RadC-like JAB domain BW47_01205 PF00535 Glycosyl transferase family 2 BW47_01210 PF00535 Glycosyl transferase family 2 BW47_01210 PF01501 Glycosyl transferase family 8 BW47_01235 PF03572 Peptidase family S41 BW47_01235 PF13180 PDZ domain BW47_01240 PF01209 ubiE/COQ5 methyltransferase family BW47_01255 PF01966 HD domain BW47_01265 PF00227 Proteasome subunit BW47_01270 PF03481 Putative GTP-binding controlling metal-binding BW47_01270 PF01300 Telomere recombination BW47_01280 PF00679 Elongation factor G C-terminus BW47_01280 PF00009 Elongation factor Tu GTP binding domain BW47_01280 PF06421 GTP-binding protein LepA C-terminus BW47_01280 PF03144 Elongation factor Tu domain 2 BW47_01285 PF02875 Mur ligase family, glutamate ligase domain BW47_01285 PF08245 Mur ligase middle domain BW47_01290 PF01134 Glucose inhibited division protein A BW47_01295 PF02911 Formyl transferase, C-terminal domain BW47_01295 PF00551 Formyl transferase BW47_01300 PF00398 Ribosomal RNA adenine dimethylase BW47_01310 PF02542 YgbB family BW47_01320 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_01320 PF00483 Nucleotidyl transferase BW47_01325 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_01325 PF00483 Nucleotidyl transferase BW47_01330 PF01791 DeoC/LacD family aldolase BW47_01335 PF01668 SmpB protein BW47_01340 PF02686 Glu-tRNAGln amidotransferase C subunit BW47_01345 PF02599 Global regulator protein family BW47_01350 PF02623 FliW protein BW47_01365 PF13684 Dihydroxyacetone kinase family BW47_01365 PF02734 DAK2 domain BW47_01375 PF02779 Transketolase, pyrimidine binding domain BW47_01375 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BW47_01375 PF02780 Transketolase, C-terminal domain BW47_01380 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BW47_01380 PF02403 Seryl-tRNA synthetase N-terminal domain BW47_01385 PF01008 Initiation factor 2 subunit family BW47_01395 PF09334 tRNA synthetases class I (M) BW47_01395 PF13603 Leucyl-tRNA synthetase, Domain 2 BW47_01395 PF00133 tRNA synthetases class I (I, L, M and V) BW47_01395 PF08264 Anticodon-binding domain of tRNA BW47_01400 PF04452 RNA methyltransferase BW47_01415 PF17820 PDZ domain BW47_01415 PF02163 Peptidase family M50 BW47_01420 PF00072 Response regulator receiver domain BW47_01420 PF00990 Diguanylate cyclase, GGDEF domain BW47_01425 PF00072 Response regulator receiver domain BW47_01430 PF04551 GcpE protein BW47_01445 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BW47_01450 PF01180 Dihydroorotate dehydrogenase BW47_01455 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BW47_01460 PF00156 Phosphoribosyl transferase domain BW47_01485 PF01266 FAD dependent oxidoreductase BW47_01490 PF04324 BFD-like [2Fe-2S] binding domain BW47_01490 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_01500 PF09371 Tex-like protein N-terminal domain BW47_01500 PF17674 HHH domain BW47_01500 PF00575 S1 RNA binding domain BW47_01500 PF16921 Tex protein YqgF-like domain BW47_01505 PF01584 CheW-like domain BW47_01510 PF18074 Primosomal protein N C-terminal domain BW47_01510 PF04851 Type III restriction enzyme, res subunit BW47_01510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BW47_01510 PF17764 3′ DNA-binding domain (3′BD) BW47_01520 PF00313 'Cold-shock' DNA-binding domain BW47_01525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BW47_01530 PF03099 Biotin/lipoate A/B protein ligase family BW47_01550 PF02261 Aspartate decarboxylase BW47_01555 PF00512 His Kinase A (phospho-acceptor) domain BW47_01555 PF00989 PAS fold BW47_01555 PF13188 PAS domain BW47_01555 PF13426 PAS domain BW47_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_01560 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BW47_01560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BW47_01570 PF02645 Uncharacterised protein, DegV family COG1307 BW47_01575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BW47_01580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BW47_01580 PF02874 ATP synthase alpha/beta family, beta-barrel domain BW47_01585 PF00231 ATP synthase BW47_01590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BW47_01590 PF00306 ATP synthase alpha/beta chain, C terminal domain BW47_01590 PF02874 ATP synthase alpha/beta family, beta-barrel domain BW47_01595 PF00213 ATP synthase delta (OSCP) subunit BW47_01600 PF00430 ATP synthase B/B' CF(0) BW47_01605 PF00137 ATP synthase subunit C BW47_01610 PF00119 ATP synthase A chain BW47_01625 PF01321 Creatinase/Prolidase N-terminal domain BW47_01625 PF00557 Metallopeptidase family M24 BW47_01635 PF03652 Holliday junction resolvase BW47_01640 PF02272 DHHA1 domain BW47_01640 PF01368 DHH family BW47_01640 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BW47_01640 PF17768 RecJ OB domain BW47_01650 PF01430 Hsp33 protein BW47_01655 PF00512 His Kinase A (phospho-acceptor) domain BW47_01655 PF00672 HAMP domain BW47_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_01655 PF18698 Histidine kinase sensor domain BW47_01655 PF00989 PAS fold BW47_01660 PF01268 Formate--tetrahydrofolate ligase BW47_01665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BW47_01665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BW47_01675 PF04556 DpnII restriction endonuclease BW47_01680 PF02086 D12 class N6 adenine-specific DNA methyltransferase BW47_01685 PF00550 Phosphopantetheine attachment site BW47_01695 PF01230 HIT domain BW47_01700 PF00709 Adenylosuccinate synthetase BW47_01710 PF12706 Beta-lactamase superfamily domain BW47_01715 PF13941 MutL protein BW47_01725 PF00288 GHMP kinases N terminal domain BW47_01730 PF13654 AAA domain BW47_01730 PF05362 Lon protease (S16) C-terminal proteolytic domain BW47_01735 PF00579 tRNA synthetases class I (W and Y) BW47_01740 PF05552 Conserved TM helix BW47_01740 PF00924 Mechanosensitive ion channel BW47_01745 PF00672 HAMP domain BW47_01745 PF02743 Cache domain BW47_01745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_01765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BW47_01765 PF00460 Flagella basal body rod protein BW47_01765 PF00460 Flagella basal body rod protein BW47_01765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BW47_01780 PF00211 Adenylate and Guanylate cyclase catalytic domain BW47_01800 PF00072 Response regulator receiver domain BW47_01800 PF01966 HD domain BW47_01810 PF03315 Serine dehydratase beta chain BW47_01815 PF03313 Serine dehydratase alpha chain BW47_01825 PF09210 Domain of unknown function (DUF1957) BW47_01825 PF03065 Glycosyl hydrolase family 57 BW47_01830 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BW47_01840 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BW47_01840 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BW47_01845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BW47_01850 PF00953 Glycosyl transferase family 4 BW47_01880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_01880 PF00672 HAMP domain BW47_01880 PF02743 Cache domain BW47_01885 PF09827 CRISPR associated protein Cas2 BW47_01890 PF01867 CRISPR associated protein Cas1 BW47_01980 PF13439 Glycosyltransferase Family 4 BW47_01980 PF00534 Glycosyl transferases group 1 BW47_01990 PF02350 UDP-N-acetylglucosamine 2-epimerase BW47_01995 PF00270 DEAD/DEAH box helicase BW47_01995 PF09382 RQC domain BW47_01995 PF16124 RecQ zinc-binding BW47_01995 PF00271 Helicase conserved C-terminal domain BW47_01995 PF00570 HRDC domain BW47_02025 PF01926 50S ribosome-binding GTPase BW47_02025 PF09269 Domain of unknown function (DUF1967) BW47_02025 PF01018 GTP1/OBG BW47_02030 PF01467 Cytidylyltransferase-like BW47_02035 PF01207 Dihydrouridine synthase (Dus) BW47_02045 PF00155 Aminotransferase class I and II BW47_02050 PF04029 2-phosphosulpholactate phosphatase BW47_02060 PF00912 Transglycosylase BW47_02060 PF00905 Penicillin binding protein transpeptidase domain BW47_02060 PF14814 Bifunctional transglycosylase second domain BW47_02070 PF00334 Nucleoside diphosphate kinase BW47_02080 PF09967 VWA-like domain (DUF2201) BW47_02080 PF13203 Putative metallopeptidase domain BW47_02090 PF00586 AIR synthase related protein, N-terminal domain BW47_02090 PF02769 AIR synthase related protein, C-terminal domain BW47_02095 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BW47_02095 PF02843 Phosphoribosylglycinamide synthetase, C domain BW47_02095 PF02844 Phosphoribosylglycinamide synthetase, N domain BW47_02100 PF02142 MGS-like domain BW47_02100 PF01808 AICARFT/IMPCHase bienzyme BW47_02105 PF00551 Formyl transferase BW47_02110 PF00156 Phosphoribosyl transferase domain BW47_02150 PF07650 KH domain BW47_02150 PF01926 50S ribosome-binding GTPase BW47_02165 PF01381 Helix-turn-helix BW47_02185 PF18766 SWI2/SNF2 ATPase BW47_02185 PF11867 Domain of unknown function (DUF3387) BW47_02185 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BW47_02200 PF02384 N-6 DNA Methylase BW47_02200 PF12161 HsdM N-terminal domain BW47_02210 PF00005 ABC transporter BW47_02225 PF17820 PDZ domain BW47_02225 PF01471 Putative peptidoglycan binding domain BW47_02225 PF03572 Peptidase family S41 BW47_02245 PF00753 Metallo-beta-lactamase superfamily BW47_02250 PF02861 Clp amino terminal domain, pathogenicity island component BW47_02250 PF07724 AAA domain (Cdc48 subfamily) BW47_02250 PF00004 ATPase family associated with various cellular activities (AAA) BW47_02250 PF10431 C-terminal, D2-small domain, of ClpB protein BW47_02250 PF17871 AAA lid domain BW47_02255 PF00301 Rubredoxin BW47_02270 PF00849 RNA pseudouridylate synthase BW47_02270 PF01479 S4 domain BW47_02275 PF16363 GDP-mannose 4,6 dehydratase BW47_02280 PF12705 PD-(D/E)XK nuclease superfamily BW47_02280 PF00580 UvrD/REP helicase N-terminal domain BW47_02280 PF13361 UvrD-like helicase C-terminal domain BW47_02310 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BW47_02310 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BW47_02315 PF10509 Galactokinase galactose-binding signature BW47_02315 PF08544 GHMP kinases C terminal BW47_02315 PF00288 GHMP kinases N terminal domain BW47_02335 PF00216 Bacterial DNA-binding protein BW47_02340 PF01202 Shikimate kinase BW47_02345 PF01894 Uncharacterised protein family UPF0047 BW47_02355 PF01297 Zinc-uptake complex component A periplasmic BW47_02360 PF00005 ABC transporter BW47_02365 PF00950 ABC 3 transport family BW47_02375 PF01687 Riboflavin kinase BW47_02375 PF06574 FAD synthetase BW47_02380 PF10576 Iron-sulfur binding domain of endonuclease III BW47_02380 PF00633 Helix-hairpin-helix motif BW47_02380 PF00730 HhH-GPD superfamily base excision DNA repair protein BW47_02385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BW47_02395 PF00860 Permease family BW47_02450 PF13732 Domain of unknown function (DUF4162) BW47_02450 PF00005 ABC transporter BW47_02465 PF08360 QacR-like protein, C-terminal region BW47_02465 PF00440 Bacterial regulatory proteins, tetR family BW47_02470 PF11896 Domain of unknown function (DUF3416) BW47_02470 PF00128 Alpha amylase, catalytic domain BW47_02475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BW47_02475 PF03714 Bacterial pullanase-associated domain BW47_02475 PF00128 Alpha amylase, catalytic domain BW47_02480 PF00486 Transcriptional regulatory protein, C terminal BW47_02480 PF00072 Response regulator receiver domain BW47_02485 PF06827 Zinc finger found in FPG and IleRS BW47_02485 PF00133 tRNA synthetases class I (I, L, M and V) BW47_02485 PF08264 Anticodon-binding domain of tRNA BW47_02495 PF00892 EamA-like transporter family BW47_02505 PF00460 Flagella basal body rod protein BW47_02505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BW47_02510 PF00460 Flagella basal body rod protein BW47_02510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BW47_02515 PF08011 PD-(D/E)XK nuclease superfamily BW47_02515 PF09820 Predicted AAA-ATPase BW47_02520 PF00005 ABC transporter BW47_02530 PF00497 Bacterial extracellular solute-binding proteins, family 3 BW47_02535 PF01380 SIS domain BW47_02540 PF02504 Fatty acid synthesis protein BW47_02545 PF01783 Ribosomal L32p protein family BW47_02560 PF01514 Secretory protein of YscJ/FliF family BW47_02560 PF08345 Flagellar M-ring protein C-terminal BW47_02565 PF14841 FliG middle domain BW47_02565 PF01706 FliG C-terminal domain BW47_02565 PF14842 FliG N-terminal domain BW47_02570 PF00929 Exonuclease BW47_02575 PF02562 PhoH-like protein BW47_02575 PF13638 PIN domain BW47_02590 PF00696 Amino acid kinase family BW47_02595 PF01926 50S ribosome-binding GTPase BW47_02600 PF13690 Chemotaxis phosphatase CheX BW47_02605 PF01048 Phosphorylase superfamily BW47_02610 PF07478 D-ala D-ala ligase C-terminus BW47_02610 PF01820 D-ala D-ala ligase N-terminus BW47_02615 PF00561 alpha/beta hydrolase fold BW47_02615 PF08386 TAP-like protein BW47_02620 PF02875 Mur ligase family, glutamate ligase domain BW47_02620 PF01225 Mur ligase family, catalytic domain BW47_02620 PF08245 Mur ligase middle domain BW47_02625 PF02629 CoA binding domain BW47_02625 PF06971 Putative DNA-binding protein N-terminus BW47_02630 PF12838 4Fe-4S dicluster domain BW47_02630 PF02906 Iron only hydrogenase large subunit, C-terminal domain BW47_02630 PF02256 Iron hydrogenase small subunit BW47_02635 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BW47_02635 PF00037 4Fe-4S binding domain BW47_02635 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BW47_02665 PF11849 Domain of unknown function (DUF3369) BW47_02670 PF00512 His Kinase A (phospho-acceptor) domain BW47_02670 PF00989 PAS fold BW47_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_02680 PF01979 Amidohydrolase family BW47_02685 PF04998 RNA polymerase Rpb1, domain 5 BW47_02685 PF05000 RNA polymerase Rpb1, domain 4 BW47_02685 PF04983 RNA polymerase Rpb1, domain 3 BW47_02685 PF04997 RNA polymerase Rpb1, domain 1 BW47_02685 PF00623 RNA polymerase Rpb1, domain 2 BW47_02690 PF04563 RNA polymerase beta subunit BW47_02690 PF00562 RNA polymerase Rpb2, domain 6 BW47_02690 PF10385 RNA polymerase beta subunit external 1 domain BW47_02690 PF04561 RNA polymerase Rpb2, domain 2 BW47_02690 PF04560 RNA polymerase Rpb2, domain 7 BW47_02690 PF04565 RNA polymerase Rpb2, domain 3 BW47_02695 PF16320 Ribosomal protein L7/L12 dimerisation domain BW47_02695 PF00542 Ribosomal protein L7/L12 C-terminal domain BW47_02700 PF00466 Ribosomal protein L10 BW47_02705 PF08889 WbqC-like protein family BW47_02715 PF04055 Radical SAM superfamily BW47_02715 PF06463 Molybdenum Cofactor Synthesis C BW47_02720 PF00733 Asparagine synthase BW47_02720 PF13537 Glutamine amidotransferase domain BW47_02725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BW47_02730 PF00551 Formyl transferase BW47_02735 PF00483 Nucleotidyl transferase BW47_02740 PF16363 GDP-mannose 4,6 dehydratase BW47_02750 PF00700 Bacterial flagellin C-terminal helical region BW47_02750 PF00669 Bacterial flagellin N-terminal helical region BW47_02755 PF13181 Tetratricopeptide repeat BW47_02755 PF00535 Glycosyl transferase family 2 BW47_02760 PF01467 Cytidylyltransferase-like BW47_02765 PF03796 DnaB-like helicase C terminal domain BW47_02765 PF00772 DnaB-like helicase N terminal domain BW47_02775 PF08011 PD-(D/E)XK nuclease superfamily BW47_02775 PF09820 Predicted AAA-ATPase BW47_02780 PF09820 Predicted AAA-ATPase BW47_02780 PF08011 PD-(D/E)XK nuclease superfamily BW47_02785 PF01042 Endoribonuclease L-PSP BW47_02800 PF02142 MGS-like domain BW47_02815 PF01336 OB-fold nucleic acid binding domain BW47_02815 PF00152 tRNA synthetases class II (D, K and N) BW47_02820 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BW47_02835 PF02649 Type I GTP cyclohydrolase folE2 BW47_02850 PF00294 pfkB family carbohydrate kinase BW47_02855 PF02767 DNA polymerase III beta subunit, central domain BW47_02855 PF00712 DNA polymerase III beta subunit, N-terminal domain BW47_02855 PF02768 DNA polymerase III beta subunit, C-terminal domain BW47_02865 PF00005 ABC transporter BW47_02875 PF00669 Bacterial flagellin N-terminal helical region BW47_02875 PF00700 Bacterial flagellin C-terminal helical region BW47_02890 PF02575 YbaB/EbfC DNA-binding family BW47_02910 PF01476 LysM domain BW47_02910 PF03734 L,D-transpeptidase catalytic domain BW47_02915 PF00106 short chain dehydrogenase BW47_02920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BW47_02920 PF00128 Alpha amylase, catalytic domain BW47_02930 PF02683 Cytochrome C biogenesis protein transmembrane region BW47_02945 PF00462 Glutaredoxin BW47_02950 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_02955 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_02955 PF13192 Thioredoxin domain BW47_02970 PF00293 NUDIX domain BW47_02980 PF02561 Flagellar protein FliS BW47_02995 PF00005 ABC transporter BW47_02995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_03000 PF00005 ABC transporter BW47_03000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_03005 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03005 PF12911 N-terminal TM domain of oligopeptide transport permease C BW47_03010 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BW47_03025 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03030 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03035 PF00005 ABC transporter BW47_03035 PF08402 TOBE domain BW47_03040 PF13416 Bacterial extracellular solute-binding protein BW47_03045 PF17284 Spermidine synthase tetramerisation domain BW47_03050 PF02675 S-adenosylmethionine decarboxylase BW47_03060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BW47_03060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BW47_03060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BW47_03060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BW47_03070 PF04474 Protein of unknown function (DUF554) BW47_03080 PF02130 Uncharacterized protein family UPF0054 BW47_03085 PF07698 7TM receptor with intracellular HD hydrolase BW47_03085 PF07697 7TM-HD extracellular BW47_03085 PF01966 HD domain BW47_03090 PF02562 PhoH-like protein BW47_03095 PF13181 Tetratricopeptide repeat BW47_03105 PF02310 B12 binding domain BW47_03110 PF00364 Biotin-requiring enzyme BW47_03120 PF01039 Carboxyl transferase domain BW47_03140 PF07517 SecA DEAD-like domain BW47_03140 PF01043 SecA preprotein cross-linking domain BW47_03140 PF07516 SecA Wing and Scaffold domain BW47_03165 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03170 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03170 PF14785 Maltose transport system permease protein MalF P2 domain BW47_03175 PF01547 Bacterial extracellular solute-binding protein BW47_03185 PF00004 ATPase family associated with various cellular activities (AAA) BW47_03185 PF07724 AAA domain (Cdc48 subfamily) BW47_03185 PF17871 AAA lid domain BW47_03185 PF10431 C-terminal, D2-small domain, of ClpB protein BW47_03185 PF02861 Clp amino terminal domain, pathogenicity island component BW47_03190 PF01979 Amidohydrolase family BW47_03205 PF01458 Uncharacterized protein family (UPF0051) BW47_03210 PF00005 ABC transporter BW47_03215 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BW47_03215 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BW47_03260 PF03477 ATP cone domain BW47_03260 PF13597 Anaerobic ribonucleoside-triphosphate reductase BW47_03270 PF02867 Ribonucleotide reductase, barrel domain BW47_03270 PF00317 Ribonucleotide reductase, all-alpha domain BW47_03270 PF03477 ATP cone domain BW47_03325 PF04309 Glycerol-3-phosphate responsive antiterminator BW47_03330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BW47_03330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BW47_03340 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_03340 PF04324 BFD-like [2Fe-2S] binding domain BW47_03345 PF04324 BFD-like [2Fe-2S] binding domain BW47_03345 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_03350 PF00990 Diguanylate cyclase, GGDEF domain BW47_03355 PF00669 Bacterial flagellin N-terminal helical region BW47_03355 PF00700 Bacterial flagellin C-terminal helical region BW47_03365 PF00293 NUDIX domain BW47_03380 PF10431 C-terminal, D2-small domain, of ClpB protein BW47_03380 PF06689 ClpX C4-type zinc finger BW47_03380 PF07724 AAA domain (Cdc48 subfamily) BW47_03385 PF00814 Glycoprotease family BW47_03390 PF00478 IMP dehydrogenase / GMP reductase domain BW47_03390 PF00571 CBS domain BW47_03400 PF01145 SPFH domain / Band 7 family BW47_03405 PF02915 Rubrerythrin BW47_03410 PF02092 Glycyl-tRNA synthetase beta subunit BW47_03410 PF05746 DALR anticodon binding domain BW47_03415 PF02091 Glycyl-tRNA synthetase alpha subunit BW47_03425 PF01098 Cell cycle protein BW47_03440 PF01250 Ribosomal protein S6 BW47_03445 PF00436 Single-strand binding protein family BW47_03450 PF01084 Ribosomal protein S18 BW47_03465 PF00471 Ribosomal protein L33 BW47_03475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BW47_03480 PF18298 NusG additional domain BW47_03480 PF02357 Transcription termination factor nusG BW47_03480 PF00467 KOW motif BW47_03485 PF00298 Ribosomal protein L11, RNA binding domain BW47_03485 PF03946 Ribosomal protein L11, N-terminal domain BW47_03490 PF00687 Ribosomal protein L1p/L10e family BW47_03515 PF00990 Diguanylate cyclase, GGDEF domain BW47_03515 PF03707 Bacterial signalling protein N terminal repeat BW47_03515 PF00563 EAL domain BW47_03520 PF00186 Dihydrofolate reductase BW47_03530 PF00970 Oxidoreductase FAD-binding domain BW47_03530 PF00111 2Fe-2S iron-sulfur cluster binding domain BW47_03530 PF00175 Oxidoreductase NAD-binding domain BW47_03535 PF02508 Rnf-Nqr subunit, membrane protein BW47_03540 PF02508 Rnf-Nqr subunit, membrane protein BW47_03545 PF04205 FMN-binding domain BW47_03550 PF03116 NQR2, RnfD, RnfE family BW47_03555 PF01050 Mannose-6-phosphate isomerase BW47_03555 PF00483 Nucleotidyl transferase BW47_03560 PF01012 Electron transfer flavoprotein domain BW47_03560 PF00766 Electron transfer flavoprotein FAD-binding domain BW47_03565 PF01012 Electron transfer flavoprotein domain BW47_03570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BW47_03570 PF02770 Acyl-CoA dehydrogenase, middle domain BW47_03570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BW47_03605 PF01225 Mur ligase family, catalytic domain BW47_03605 PF08245 Mur ligase middle domain BW47_03605 PF02875 Mur ligase family, glutamate ligase domain BW47_03615 PF00953 Glycosyl transferase family 4 BW47_03620 PF00953 Glycosyl transferase family 4 BW47_03630 PF02119 Flagellar P-ring protein BW47_03635 PF02107 Flagellar L-ring protein BW47_03645 PF00986 DNA gyrase B subunit, carboxyl terminus BW47_03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_03645 PF01751 Toprim domain BW47_03645 PF00204 DNA gyrase B BW47_03655 PF01063 Amino-transferase class IV BW47_03660 PF00919 Uncharacterized protein family UPF0004 BW47_03660 PF04055 Radical SAM superfamily BW47_03665 PF00571 CBS domain BW47_03665 PF00478 IMP dehydrogenase / GMP reductase domain BW47_03675 PF00005 ABC transporter BW47_03675 PF00664 ABC transporter transmembrane region BW47_03705 PF00403 Heavy-metal-associated domain BW47_03725 PF00464 Serine hydroxymethyltransferase BW47_03740 PF01915 Glycosyl hydrolase family 3 C-terminal domain BW47_03740 PF00933 Glycosyl hydrolase family 3 N terminal domain BW47_03745 PF13416 Bacterial extracellular solute-binding protein BW47_03750 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03755 PF00528 Binding-protein-dependent transport system inner membrane component BW47_03765 PF01979 Amidohydrolase family BW47_03770 PF02277 Phosphoribosyltransferase BW47_03780 PF02570 Precorrin-8X methylmutase BW47_03785 PF01888 CbiD BW47_03790 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BW47_03805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BW47_03810 PF01890 Cobalamin synthesis G C-terminus BW47_03810 PF11761 Cobalamin biosynthesis central region BW47_03810 PF11760 Cobalamin synthesis G N-terminal BW47_03815 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BW47_03815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BW47_03820 PF02571 Precorrin-6x reductase CbiJ/CobK BW47_03825 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BW47_03825 PF01488 Shikimate / quinate 5-dehydrogenase BW47_03825 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BW47_03840 PF00490 Delta-aminolevulinic acid dehydratase BW47_03845 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BW47_03845 PF14824 Sirohaem biosynthesis protein central BW47_03845 PF10414 Sirohaem synthase dimerisation region BW47_03850 PF00202 Aminotransferase class-III BW47_03855 PF01891 Cobalt uptake substrate-specific transmembrane region BW47_03860 PF02553 Cobalt transport protein component CbiN BW47_03870 PF00005 ABC transporter BW47_03880 PF00075 RNase H BW47_03885 PF00958 GMP synthase C terminal domain BW47_03885 PF00117 Glutamine amidotransferase class-I BW47_03885 PF02540 NAD synthase BW47_03890 PF04011 LemA family BW47_03905 PF00291 Pyridoxal-phosphate dependent enzyme BW47_03915 PF01384 Phosphate transporter family BW47_03930 PF00809 Pterin binding enzyme BW47_03930 PF02310 B12 binding domain BW47_03930 PF02607 B12 binding domain BW47_03930 PF02574 Homocysteine S-methyltransferase BW47_03930 PF02965 Vitamin B12 dependent methionine synthase, activation domain BW47_03940 PF02219 Methylenetetrahydrofolate reductase BW47_03955 PF03447 Homoserine dehydrogenase, NAD binding domain BW47_03955 PF00742 Homoserine dehydrogenase BW47_03955 PF00696 Amino acid kinase family BW47_03980 PF00128 Alpha amylase, catalytic domain BW47_03990 PF00578 AhpC/TSA family BW47_04000 PF00005 ABC transporter BW47_04010 PF08279 HTH domain BW47_04010 PF00072 Response regulator receiver domain BW47_04020 PF13393 Histidyl-tRNA synthetase BW47_04020 PF03129 Anticodon binding domain BW47_04035 PF00483 Nucleotidyl transferase BW47_04045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_04050 PF03707 Bacterial signalling protein N terminal repeat BW47_04050 PF00563 EAL domain BW47_04050 PF00990 Diguanylate cyclase, GGDEF domain BW47_04055 PF00528 Binding-protein-dependent transport system inner membrane component BW47_04060 PF00528 Binding-protein-dependent transport system inner membrane component BW47_04065 PF13416 Bacterial extracellular solute-binding protein BW47_04070 PF03063 Prismane/CO dehydrogenase family BW47_04085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BW47_04085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BW47_04085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BW47_04085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BW47_04095 PF00578 AhpC/TSA family BW47_04100 PF02567 Phenazine biosynthesis-like protein BW47_04105 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BW47_04105 PF13378 Enolase C-terminal domain-like BW47_04110 PF01470 Pyroglutamyl peptidase BW47_04115 PF00356 Bacterial regulatory proteins, lacI family BW47_04125 PF02056 Family 4 glycosyl hydrolase BW47_04125 PF11975 Family 4 glycosyl hydrolase C-terminal domain BW47_04135 PF01758 Sodium Bile acid symporter family BW47_04140 PF01758 Sodium Bile acid symporter family BW47_04145 PF01758 Sodium Bile acid symporter family BW47_04155 PF08676 MutL C terminal dimerisation domain BW47_04155 PF01119 DNA mismatch repair protein, C-terminal domain BW47_04160 PF00128 Alpha amylase, catalytic domain BW47_04160 PF09178 Domain of unknown function (DUF1945) BW47_04170 PF11871 Domain of unknown function (DUF3391) BW47_04170 PF01966 HD domain BW47_04175 PF00990 Diguanylate cyclase, GGDEF domain BW47_04180 PF04055 Radical SAM superfamily BW47_04180 PF18693 TRAM domain BW47_04180 PF00919 Uncharacterized protein family UPF0004 BW47_04195 PF08281 Sigma-70, region 4 BW47_04195 PF04542 Sigma-70 region 2 BW47_04205 PF00580 UvrD/REP helicase N-terminal domain BW47_04205 PF13361 UvrD-like helicase C-terminal domain BW47_04225 PF00356 Bacterial regulatory proteins, lacI family BW47_04230 PF02464 Competence-damaged protein BW47_04230 PF18146 Damage-inducible protein CinA KH domain BW47_04230 PF00994 Probable molybdopterin binding domain BW47_04235 PF06418 CTP synthase N-terminus BW47_04235 PF00117 Glutamine amidotransferase class-I BW47_04240 PF02811 PHP domain BW47_04245 PF00889 Elongation factor TS BW47_04255 PF01865 Protein of unknown function DUF47 BW47_04260 PF01384 Phosphate transporter family BW47_04265 PF01464 Transglycosylase SLT domain BW47_04265 PF00497 Bacterial extracellular solute-binding proteins, family 3 BW47_04280 PF00990 Diguanylate cyclase, GGDEF domain BW47_04295 PF03600 Citrate transporter BW47_04300 PF01926 50S ribosome-binding GTPase BW47_04300 PF01018 GTP1/OBG BW47_04305 PF06130 Phosphate propanoyltransferase BW47_04330 PF02806 Alpha amylase, C-terminal all-beta domain BW47_04330 PF00128 Alpha amylase, catalytic domain BW47_04330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BW47_04335 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BW47_04340 PF00361 Proton-conducting membrane transporter BW47_04340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BW47_04345 PF00365 Phosphofructokinase BW47_04350 PF00465 Iron-containing alcohol dehydrogenase BW47_04355 PF01926 50S ribosome-binding GTPase BW47_04355 PF07650 KH domain BW47_04360 PF03147 Ferredoxin-fold anticodon binding domain BW47_04360 PF03484 tRNA synthetase B5 domain BW47_04360 PF01588 Putative tRNA binding domain BW47_04360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BW47_04360 PF03483 B3/4 domain BW47_04380 PF02660 Glycerol-3-phosphate acyltransferase BW47_04390 PF02350 UDP-N-acetylglucosamine 2-epimerase BW47_04410 PF00528 Binding-protein-dependent transport system inner membrane component BW47_04415 PF00528 Binding-protein-dependent transport system inner membrane component BW47_04420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_04420 PF00672 HAMP domain BW47_04420 PF02743 Cache domain BW47_04425 PF08448 PAS fold BW47_04425 PF00990 Diguanylate cyclase, GGDEF domain BW47_04430 PF04286 Protein of unknown function (DUF445) BW47_04435 PF13932 GidA associated domain BW47_04435 PF01134 Glucose inhibited division protein A BW47_04440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_04440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BW47_04445 PF03749 Sugar fermentation stimulation protein RE domain BW47_04445 PF17746 SfsA N-terminal OB domain BW47_04460 PF01022 Bacterial regulatory protein, arsR family BW47_04465 PF01554 MatE BW47_04470 PF16326 ABC transporter C-terminal domain BW47_04470 PF00005 ABC transporter BW47_04470 PF12848 ABC transporter BW47_04490 PF10609 NUBPL iron-transfer P-loop NTPase BW47_04500 PF01975 Survival protein SurE BW47_04505 PF01327 Polypeptide deformylase BW47_04510 PF00271 Helicase conserved C-terminal domain BW47_04510 PF00270 DEAD/DEAH box helicase BW47_04520 PF00005 ABC transporter BW47_04535 PF00072 Response regulator receiver domain BW47_04535 PF00486 Transcriptional regulatory protein, C terminal BW47_04545 PF01132 Elongation factor P (EF-P) OB domain BW47_04545 PF09285 Elongation factor P, C-terminal BW47_04545 PF08207 Elongation factor P (EF-P) KOW-like domain BW47_04555 PF01029 NusB family BW47_04570 PF01311 Bacterial export proteins, family 1 BW47_04575 PF02743 Cache domain BW47_04575 PF00672 HAMP domain BW47_04575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_04580 PF01048 Phosphorylase superfamily BW47_04585 PF00990 Diguanylate cyclase, GGDEF domain BW47_04595 PF02277 Phosphoribosyltransferase BW47_04600 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BW47_04610 PF02654 Cobalamin-5-phosphate synthase BW47_04615 PF07685 CobB/CobQ-like glutamine amidotransferase domain BW47_04620 PF03186 CobD/Cbib protein BW47_04625 PF00155 Aminotransferase class I and II BW47_04630 PF12557 Cob(I)alamin adenosyltransferase N terminal BW47_04630 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BW47_04635 PF00082 Subtilase family BW47_04655 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BW47_04660 PF00849 RNA pseudouridylate synthase BW47_04660 PF01479 S4 domain BW47_04670 PF12146 Serine aminopeptidase, S33 BW47_04675 PF00266 Aminotransferase class-V BW47_04680 PF12804 MobA-like NTP transferase domain BW47_04680 PF14602 Hexapeptide repeat of succinyl-transferase BW47_04680 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_04700 PF01139 tRNA-splicing ligase RtcB BW47_04705 PF00005 ABC transporter BW47_04710 PF00528 Binding-protein-dependent transport system inner membrane component BW47_04740 PF01594 AI-2E family transporter BW47_04745 PF00710 Asparaginase, N-terminal BW47_04745 PF17763 Glutaminase/Asparaginase C-terminal domain BW47_04775 PF06470 SMC proteins Flexible Hinge Domain BW47_04775 PF02463 RecF/RecN/SMC N terminal domain BW47_04780 PF01225 Mur ligase family, catalytic domain BW47_04780 PF02875 Mur ligase family, glutamate ligase domain BW47_04780 PF08245 Mur ligase middle domain BW47_04785 PF03033 Glycosyltransferase family 28 N-terminal domain BW47_04785 PF04101 Glycosyltransferase family 28 C-terminal domain BW47_04790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BW47_04790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BW47_04795 PF00881 Nitroreductase family BW47_04850 PF07676 WD40-like Beta Propeller Repeat BW47_04850 PF00326 Prolyl oligopeptidase family BW47_04855 PF01113 Dihydrodipicolinate reductase, N-terminus BW47_04865 PF00291 Pyridoxal-phosphate dependent enzyme BW47_04870 PF16552 D-ornithine 4,5-aminomutase alpha-subunit BW47_04875 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase BW47_04875 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit BW47_04875 PF02310 B12 binding domain BW47_04880 PF01026 TatD related DNase BW47_04885 PF07499 RuvA, C-terminal domain BW47_04885 PF01330 RuvA N terminal domain BW47_04905 PF18698 Histidine kinase sensor domain BW47_04905 PF00512 His Kinase A (phospho-acceptor) domain BW47_04905 PF00672 HAMP domain BW47_04905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_04925 PF00849 RNA pseudouridylate synthase BW47_04925 PF01479 S4 domain BW47_04940 PF00224 Pyruvate kinase, barrel domain BW47_04940 PF02887 Pyruvate kinase, alpha/beta domain BW47_04960 PF05198 Translation initiation factor IF-3, N-terminal domain BW47_04960 PF00707 Translation initiation factor IF-3, C-terminal domain BW47_04965 PF01632 Ribosomal protein L35 BW47_04970 PF00453 Ribosomal protein L20 BW47_04975 PF00318 Ribosomal protein S2 BW47_04980 PF02223 Thymidylate kinase BW47_04985 PF01313 Bacterial export proteins, family 3 BW47_04990 PF00813 FliP family BW47_05000 PF00072 Response regulator receiver domain BW47_05005 PF01584 CheW-like domain BW47_05010 PF01584 CheW-like domain BW47_05010 PF02895 Signal transducing histidine kinase, homodimeric domain BW47_05010 PF01627 Hpt domain BW47_05010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_05010 PF07194 P2 response regulator binding domain BW47_05020 PF01479 S4 domain BW47_05020 PF01728 FtsJ-like methyltransferase BW47_05030 PF01416 tRNA pseudouridine synthase BW47_05050 PF07726 ATPase family associated with various cellular activities (AAA) BW47_05050 PF17863 AAA lid domain BW47_05060 PF01098 Cell cycle protein BW47_05065 PF06969 HemN C-terminal domain BW47_05065 PF04055 Radical SAM superfamily BW47_05075 PF02637 GatB domain BW47_05075 PF02934 GatB/GatE catalytic domain BW47_05080 PF01425 Amidase BW47_05095 PF00164 Ribosomal protein S12/S23 BW47_05100 PF00177 Ribosomal protein S7p/S5e BW47_05105 PF00009 Elongation factor Tu GTP binding domain BW47_05105 PF14492 Elongation Factor G, domain II BW47_05105 PF00679 Elongation factor G C-terminus BW47_05105 PF03764 Elongation factor G, domain IV BW47_05105 PF03144 Elongation factor Tu domain 2 BW47_05110 PF03143 Elongation factor Tu C-terminal domain BW47_05110 PF03144 Elongation factor Tu domain 2 BW47_05110 PF00009 Elongation factor Tu GTP binding domain BW47_05115 PF00338 Ribosomal protein S10p/S20e BW47_05120 PF00297 Ribosomal protein L3 BW47_05125 PF00573 Ribosomal protein L4/L1 family BW47_05130 PF00276 Ribosomal protein L23 BW47_05135 PF00181 Ribosomal Proteins L2, RNA binding domain BW47_05135 PF03947 Ribosomal Proteins L2, C-terminal domain BW47_05140 PF00203 Ribosomal protein S19 BW47_05145 PF00237 Ribosomal protein L22p/L17e BW47_05150 PF07650 KH domain BW47_05150 PF00189 Ribosomal protein S3, C-terminal domain BW47_05155 PF00252 Ribosomal protein L16p/L10e BW47_05160 PF00831 Ribosomal L29 protein BW47_05165 PF00366 Ribosomal protein S17 BW47_05170 PF00238 Ribosomal protein L14p/L23e BW47_05175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BW47_05175 PF00467 KOW motif BW47_05180 PF00673 ribosomal L5P family C-terminus BW47_05180 PF00281 Ribosomal protein L5 BW47_05185 PF00253 Ribosomal protein S14p/S29e BW47_05190 PF00410 Ribosomal protein S8 BW47_05195 PF00347 Ribosomal protein L6 BW47_05200 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BW47_05205 PF00333 Ribosomal protein S5, N-terminal domain BW47_05205 PF03719 Ribosomal protein S5, C-terminal domain BW47_05210 PF00327 Ribosomal protein L30p/L7e BW47_05215 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BW47_05220 PF00344 SecY translocase BW47_05225 PF05191 Adenylate kinase, active site lid BW47_05230 PF00557 Metallopeptidase family M24 BW47_05235 PF01176 Translation initiation factor 1A / IF-1 BW47_05240 PF00444 Ribosomal protein L36 BW47_05245 PF00416 Ribosomal protein S13/S18 BW47_05250 PF00411 Ribosomal protein S11 BW47_05255 PF00163 Ribosomal protein S4/S9 N-terminal domain BW47_05255 PF01479 S4 domain BW47_05260 PF01000 RNA polymerase Rpb3/RpoA insert domain BW47_05260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BW47_05260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BW47_05265 PF01196 Ribosomal protein L17 BW47_05270 PF05697 Bacterial trigger factor protein (TF) BW47_05270 PF05698 Bacterial trigger factor protein (TF) C-terminus BW47_05275 PF00574 Clp protease BW47_05280 PF01709 Transcriptional regulator BW47_05290 PF03705 CheR methyltransferase, all-alpha domain BW47_05290 PF01739 CheR methyltransferase, SAM binding domain BW47_05295 PF01252 Signal peptidase (SPase) II BW47_05300 PF01479 S4 domain BW47_05300 PF00849 RNA pseudouridylate synthase BW47_05305 PF00120 Glutamine synthetase, catalytic domain BW47_05305 PF03951 Glutamine synthetase, beta-Grasp domain BW47_05310 PF03537 Glycoside-hydrolase family GH114 BW47_05325 PF00534 Glycosyl transferases group 1 BW47_05350 PF00072 Response regulator receiver domain BW47_05350 PF01966 HD domain BW47_05355 PF17248 Family of unknown function (DUF5317) BW47_05360 PF00814 Glycoprotease family BW47_05365 PF05188 MutS domain II BW47_05365 PF05192 MutS domain III BW47_05365 PF05190 MutS family domain IV BW47_05365 PF01624 MutS domain I BW47_05365 PF00488 MutS domain V BW47_05370 PF01966 HD domain BW47_05370 PF00672 HAMP domain BW47_05375 PF01871 AMMECR1 BW47_05390 PF01171 PP-loop family BW47_05395 PF03313 Serine dehydratase alpha chain BW47_05405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BW47_05405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BW47_05420 PF00392 Bacterial regulatory proteins, gntR family BW47_05425 PF04041 beta-1,4-mannooligosaccharide phosphorylase BW47_05430 PF00528 Binding-protein-dependent transport system inner membrane component BW47_05435 PF00528 Binding-protein-dependent transport system inner membrane component BW47_05445 PF01547 Bacterial extracellular solute-binding protein BW47_05465 PF05233 PHB accumulation regulatory domain BW47_05465 PF07879 PHB/PHA accumulation regulator DNA-binding domain BW47_05470 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_05480 PF01131 DNA topoisomerase BW47_05480 PF01751 Toprim domain BW47_05485 PF01336 OB-fold nucleic acid binding domain BW47_05485 PF01966 HD domain BW47_05490 PF00842 Alanine racemase, C-terminal domain BW47_05490 PF01168 Alanine racemase, N-terminal domain BW47_05500 PF00830 Ribosomal L28 family BW47_05510 PF00140 Sigma-70 factor, region 1.2 BW47_05510 PF03979 Sigma-70 factor, region 1.1 BW47_05510 PF04542 Sigma-70 region 2 BW47_05510 PF04539 Sigma-70 region 3 BW47_05510 PF04545 Sigma-70, region 4 BW47_05515 PF01807 CHC2 zinc finger BW47_05515 PF08275 DNA primase catalytic core, N-terminal domain BW47_05520 PF00380 Ribosomal protein S9/S16 BW47_05525 PF00572 Ribosomal protein L13 BW47_05530 PF12822 ECF transporter, substrate-specific component BW47_05535 PF01016 Ribosomal L27 protein BW47_05545 PF00829 Ribosomal prokaryotic L21 protein BW47_05555 PF02075 Crossover junction endodeoxyribonuclease RuvC BW47_05560 PF14579 Helix-hairpin-helix motif BW47_05560 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BW47_05560 PF07733 Bacterial DNA polymerase III alpha NTPase domain BW47_05560 PF02811 PHP domain BW47_05560 PF00929 Exonuclease BW47_05565 PF04232 Stage V sporulation protein S (SpoVS) BW47_05575 PF07136 Protein of unknown function (DUF1385) BW47_05580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BW47_05580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BW47_05585 PF01546 Peptidase family M20/M25/M40 BW47_05585 PF07687 Peptidase dimerisation domain BW47_05590 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BW47_05590 PF01409 tRNA synthetases class II core domain (F) BW47_05595 PF01509 TruB family pseudouridylate synthase (N terminal domain) BW47_05595 PF16198 tRNA pseudouridylate synthase B C-terminal domain BW47_05600 PF01926 50S ribosome-binding GTPase BW47_05600 PF06071 Protein of unknown function (DUF933) BW47_05605 PF04025 Domain of unknown function (DUF370) BW47_05610 PF04055 Radical SAM superfamily BW47_05610 PF00919 Uncharacterized protein family UPF0004 BW47_05615 PF00795 Carbon-nitrogen hydrolase BW47_05620 PF02535 ZIP Zinc transporter BW47_05625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BW47_05625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BW47_05630 PF13419 Haloacid dehalogenase-like hydrolase BW47_05640 PF03060 Nitronate monooxygenase BW47_05645 PF09820 Predicted AAA-ATPase BW47_05645 PF08011 PD-(D/E)XK nuclease superfamily BW47_05690 PF02397 Bacterial sugar transferase BW47_05695 PF13439 Glycosyltransferase Family 4 BW47_05695 PF00534 Glycosyl transferases group 1 BW47_05710 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BW47_05710 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BW47_05710 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BW47_05720 PF00483 Nucleotidyl transferase BW47_05725 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BW47_05730 PF04321 RmlD substrate binding domain BW47_05735 PF16363 GDP-mannose 4,6 dehydratase BW47_05740 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BW47_05750 PF01467 Cytidylyltransferase-like BW47_05785 PF16363 GDP-mannose 4,6 dehydratase BW47_05815 PF04326 Putative DNA-binding domain BW47_05895 PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system BW47_05955 PF01209 ubiE/COQ5 methyltransferase family BW47_06000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_06005 PF00149 Calcineurin-like phosphoesterase BW47_06010 PF03775 Septum formation inhibitor MinC, C-terminal domain BW47_06025 PF00460 Flagella basal body rod protein BW47_06025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BW47_06030 PF02049 Flagellar hook-basal body complex protein FliE BW47_06035 PF00011 Hsp20/alpha crystallin family BW47_06040 PF00012 Hsp70 protein BW47_06045 PF01906 Putative heavy-metal-binding BW47_06050 PF13026 Protein of unknown function (DUF3887) BW47_06050 PF12146 Serine aminopeptidase, S33 BW47_06060 PF00005 ABC transporter BW47_06065 PF00392 Bacterial regulatory proteins, gntR family BW47_06075 PF01144 Coenzyme A transferase BW47_06080 PF01144 Coenzyme A transferase BW47_06085 PF00245 Alkaline phosphatase BW47_06095 PF00970 Oxidoreductase FAD-binding domain BW47_06095 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BW47_06095 PF00175 Oxidoreductase NAD-binding domain BW47_06100 PF00294 pfkB family carbohydrate kinase BW47_06105 PF00480 ROK family BW47_06125 PF00072 Response regulator receiver domain BW47_06130 PF00072 Response regulator receiver domain BW47_06130 PF01339 CheB methylesterase BW47_06155 PF00873 AcrB/AcrD/AcrF family BW47_06170 PF00919 Uncharacterized protein family UPF0004 BW47_06170 PF18693 TRAM domain BW47_06170 PF04055 Radical SAM superfamily BW47_06175 PF01066 CDP-alcohol phosphatidyltransferase BW47_06185 PF00154 recA bacterial DNA recombination protein BW47_06190 PF02631 RecX family BW47_06195 PF01966 HD domain BW47_06195 PF00013 KH domain BW47_06195 PF12072 Domain of unknown function (DUF3552) BW47_06200 PF17912 MalK OB fold domain BW47_06200 PF03459 TOBE domain BW47_06200 PF00005 ABC transporter BW47_06215 PF08362 YcdC-like protein, C-terminal region BW47_06215 PF00440 Bacterial regulatory proteins, tetR family BW47_06220 PF01197 Ribosomal protein L31 BW47_06225 PF00575 S1 RNA binding domain BW47_06235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BW47_06235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BW47_06235 PF00037 4Fe-4S binding domain BW47_06245 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BW47_06245 PF00037 4Fe-4S binding domain BW47_06245 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BW47_06260 PF02971 Formiminotransferase domain BW47_06260 PF07837 Formiminotransferase domain, N-terminal subdomain BW47_06265 PF00459 Inositol monophosphatase family BW47_06270 PF03717 Penicillin-binding Protein dimerisation domain BW47_06270 PF00905 Penicillin binding protein transpeptidase domain BW47_06275 PF00749 tRNA synthetases class I (E and Q), catalytic domain BW47_06285 PF01008 Initiation factor 2 subunit family BW47_06295 PF09424 Yqey-like protein BW47_06300 PF00850 Histone deacetylase domain BW47_06305 PF02502 Ribose/Galactose Isomerase BW47_06310 PF01740 STAS domain BW47_06315 PF00717 Peptidase S24-like BW47_06315 PF01726 LexA DNA binding domain BW47_06325 PF00521 DNA gyrase/topoisomerase IV, subunit A BW47_06325 PF03989 DNA gyrase C-terminal domain, beta-propeller BW47_06330 PF08264 Anticodon-binding domain of tRNA BW47_06330 PF01588 Putative tRNA binding domain BW47_06330 PF09334 tRNA synthetases class I (M) BW47_06335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BW47_06350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_06350 PF00005 ABC transporter BW47_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_06355 PF00005 ABC transporter BW47_06360 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BW47_06360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BW47_06360 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BW47_06360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BW47_06365 PF01966 HD domain BW47_06370 PF01475 Ferric uptake regulator family BW47_06375 PF10417 C-terminal domain of 1-Cys peroxiredoxin BW47_06375 PF00578 AhpC/TSA family BW47_06380 PF00301 Rubredoxin BW47_06385 PF00753 Metallo-beta-lactamase superfamily BW47_06385 PF00258 Flavodoxin BW47_06390 PF00210 Ferritin-like domain BW47_06400 PF01880 Desulfoferrodoxin BW47_06400 PF06397 Desulfoferrodoxin, N-terminal domain BW47_06415 PF00672 HAMP domain BW47_06415 PF01966 HD domain BW47_06425 PF00265 Thymidine kinase BW47_06430 PF02872 5'-nucleotidase, C-terminal domain BW47_06430 PF00149 Calcineurin-like phosphoesterase BW47_06440 PF02629 CoA binding domain BW47_06440 PF06971 Putative DNA-binding protein N-terminus BW47_06445 PF01899 Na+/H+ ion antiporter subunit BW47_06450 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BW47_06465 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BW47_06465 PF00361 Proton-conducting membrane transporter BW47_06465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BW47_06465 PF13244 Domain of unknown function (DUF4040) BW47_06470 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BW47_06475 PF00361 Proton-conducting membrane transporter BW47_06490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BW47_06495 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BW47_06500 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BW47_06505 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BW47_06505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BW47_06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_06515 PF00483 Nucleotidyl transferase BW47_06515 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_06520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BW47_06520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BW47_06530 PF00753 Metallo-beta-lactamase superfamily BW47_06540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BW47_06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase BW47_06545 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_06545 PF06426 Serine acetyltransferase, N-terminal BW47_06550 PF00291 Pyridoxal-phosphate dependent enzyme BW47_06555 PF00731 AIR carboxylase BW47_06560 PF01259 SAICAR synthetase BW47_06565 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BW47_06575 PF00586 AIR synthase related protein, N-terminal domain BW47_06575 PF02769 AIR synthase related protein, C-terminal domain BW47_06575 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BW47_06575 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus BW47_06580 PF01293 Phosphoenolpyruvate carboxykinase BW47_06590 PF04227 Indigoidine synthase A like protein BW47_06595 PF12850 Calcineurin-like phosphoesterase superfamily domain BW47_06600 PF01205 Uncharacterized protein family UPF0029 BW47_06600 PF09186 Domain of unknown function (DUF1949) BW47_06605 PF00155 Aminotransferase class I and II BW47_06610 PF00206 Lyase BW47_06610 PF10397 Adenylosuccinate lyase C-terminus BW47_06615 PF01022 Bacterial regulatory protein, arsR family BW47_06620 PF01545 Cation efflux family BW47_06620 PF16916 Dimerisation domain of Zinc Transporter BW47_06695 PF01242 6-pyruvoyl tetrahydropterin synthase BW47_06700 PF00155 Aminotransferase class I and II BW47_06720 PF00072 Response regulator receiver domain BW47_06720 PF00486 Transcriptional regulatory protein, C terminal BW47_06725 PF00162 Phosphoglycerate kinase BW47_06725 PF00121 Triosephosphate isomerase BW47_06730 PF00162 Phosphoglycerate kinase BW47_06735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BW47_06735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BW47_06750 PF02874 ATP synthase alpha/beta family, beta-barrel domain BW47_06750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BW47_06750 PF18269 T3SS EscN ATPase C-terminal domain BW47_06760 PF00871 Acetokinase family BW47_06765 PF01116 Fructose-bisphosphate aldolase class-II BW47_06780 PF12327 FtsZ family, C-terminal domain BW47_06780 PF00091 Tubulin/FtsZ family, GTPase domain BW47_06785 PF00437 Type II/IV secretion system protein BW47_06795 PF01765 Ribosome recycling factor BW47_06800 PF01255 Putative undecaprenyl diphosphate synthase BW47_06810 PF01411 tRNA synthetases class II (A) BW47_06810 PF02272 DHHA1 domain BW47_06810 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BW47_06830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BW47_06835 PF02719 Polysaccharide biosynthesis protein BW47_06850 PF14492 Elongation Factor G, domain II BW47_06850 PF03764 Elongation factor G, domain IV BW47_06850 PF00679 Elongation factor G C-terminus BW47_06850 PF00009 Elongation factor Tu GTP binding domain BW47_06865 PF13860 FlgD Ig-like domain BW47_06865 PF03963 Flagellar hook capping protein - N-terminal region BW47_06865 PF13861 FlgD Tudor-like domain BW47_06870 PF07196 Flagellin hook IN motif BW47_06870 PF07559 Flagellar basal body protein FlaE BW47_06870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BW47_06870 PF00460 Flagella basal body rod protein BW47_06875 PF06289 Flagellar and Swarming motility proteins BW47_06880 PF01618 MotA/TolQ/ExbB proton channel family BW47_06885 PF13677 Membrane MotB of proton-channel complex MotA/MotB BW47_06885 PF00691 OmpA family BW47_06895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BW47_06895 PF02154 Flagellar motor switch protein FliM BW47_06900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BW47_06900 PF04509 CheC-like family BW47_06910 PF00209 Sodium:neurotransmitter symporter family BW47_06920 PF04079 Segregation and condensation complex subunit ScpB BW47_06925 PF02616 Segregation and condensation protein ScpA BW47_06930 PF03448 MgtE intracellular N domain BW47_06930 PF00571 CBS domain BW47_06930 PF01769 Divalent cation transporter BW47_06940 PF04127 DNA / pantothenate metabolism flavoprotein BW47_06940 PF02441 Flavoprotein BW47_06945 PF02548 Ketopantoate hydroxymethyltransferase BW47_06960 PF00005 ABC transporter BW47_06980 PF02677 Epoxyqueuosine reductase QueH BW47_06985 PF02580 D-Tyr-tRNA(Tyr) deacylase BW47_06990 PF02824 TGS domain BW47_06990 PF04607 Region found in RelA / SpoT proteins BW47_06990 PF13291 ACT domain BW47_07005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BW47_07005 PF01799 [2Fe-2S] binding domain BW47_07005 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BW47_07010 PF01799 [2Fe-2S] binding domain BW47_07010 PF00111 2Fe-2S iron-sulfur cluster binding domain BW47_07025 PF01799 [2Fe-2S] binding domain BW47_07025 PF00111 2Fe-2S iron-sulfur cluster binding domain BW47_07030 PF00291 Pyridoxal-phosphate dependent enzyme BW47_07045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BW47_07045 PF02824 TGS domain BW47_07045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BW47_07045 PF03129 Anticodon binding domain BW47_07050 PF00072 Response regulator receiver domain BW47_07060 PF01145 SPFH domain / Band 7 family BW47_07075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BW47_07075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BW47_07085 PF03808 Glycosyl transferase WecB/TagA/CpsF family BW47_07090 PF02527 rRNA small subunit methyltransferase G BW47_07095 PF01926 50S ribosome-binding GTPase BW47_07095 PF12631 MnmE helical domain BW47_07095 PF10396 GTP-binding protein TrmE N-terminus BW47_07110 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BW47_07110 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BW47_07110 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BW47_07135 PF00990 Diguanylate cyclase, GGDEF domain BW47_07140 PF03009 Glycerophosphoryl diester phosphodiesterase family BW47_07145 PF00155 Aminotransferase class I and II BW47_07150 PF08240 Alcohol dehydrogenase GroES-like domain BW47_07150 PF00107 Zinc-binding dehydrogenase BW47_07170 PF01554 MatE BW47_07180 PF00005 ABC transporter BW47_07205 PF00899 ThiF family BW47_07210 PF00206 Lyase BW47_07210 PF10415 Fumarase C C-terminus BW47_07215 PF07650 KH domain BW47_07215 PF01926 50S ribosome-binding GTPase BW47_07225 PF00348 Polyprenyl synthetase BW47_07235 PF00485 Phosphoribulokinase / Uridine kinase family BW47_07240 PF01966 HD domain BW47_07245 PF03309 Type III pantothenate kinase BW47_07250 PF02310 B12 binding domain BW47_07250 PF04055 Radical SAM superfamily BW47_07270 PF01177 Asp/Glu/Hydantoin racemase BW47_07275 PF03668 P-loop ATPase protein family BW47_07280 PF01933 Uncharacterised protein family UPF0052 BW47_07285 PF02650 WhiA C-terminal HTH domain BW47_07285 PF14527 WhiA LAGLIDADG-like domain BW47_07290 PF03477 ATP cone domain BW47_07295 PF01272 Transcription elongation factor, GreA/GreB, C-term BW47_07295 PF03449 Transcription elongation factor, N-terminal BW47_07300 PF01336 OB-fold nucleic acid binding domain BW47_07300 PF00152 tRNA synthetases class II (D, K and N) BW47_07310 PF01479 S4 domain BW47_07320 PF00664 ABC transporter transmembrane region BW47_07320 PF00005 ABC transporter BW47_07330 PF00005 ABC transporter BW47_07330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_07335 PF00005 ABC transporter BW47_07335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_07340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BW47_07345 PF00528 Binding-protein-dependent transport system inner membrane component BW47_07350 PF00528 Binding-protein-dependent transport system inner membrane component BW47_07350 PF12911 N-terminal TM domain of oligopeptide transport permease C BW47_07380 PF07498 Rho termination factor, N-terminal domain BW47_07380 PF07497 Rho termination factor, RNA-binding domain BW47_07380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BW47_07390 PF00472 RF-1 domain BW47_07390 PF03462 PCRF domain BW47_07395 PF00437 Type II/IV secretion system protein BW47_07400 PF12169 DNA polymerase III subunits gamma and tau domain III BW47_07420 PF01734 Patatin-like phospholipase BW47_07425 PF01261 Xylose isomerase-like TIM barrel BW47_07435 PF02540 NAD synthase BW47_07435 PF00795 Carbon-nitrogen hydrolase BW47_07455 PF01790 Prolipoprotein diacylglyceryl transferase BW47_07460 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase BW47_07460 PF01676 Metalloenzyme superfamily BW47_07470 PF01475 Ferric uptake regulator family BW47_07475 PF08529 NusA N-terminal domain BW47_07475 PF13184 NusA-like KH domain BW47_07475 PF00575 S1 RNA binding domain BW47_07480 PF02576 RimP N-terminal domain BW47_07480 PF17384 RimP C-terminal SH3 domain BW47_07500 PF01702 Queuine tRNA-ribosyltransferase BW47_07510 PF00156 Phosphoribosyl transferase domain BW47_07520 PF01883 Iron-sulfur cluster assembly protein BW47_07525 PF05175 Methyltransferase small domain BW47_07525 PF17827 PrmC N-terminal domain BW47_07530 PF01281 Ribosomal protein L9, N-terminal domain BW47_07530 PF03948 Ribosomal protein L9, C-terminal domain BW47_07535 PF12706 Beta-lactamase superfamily domain BW47_07545 PF12627 Probable RNA and SrmB- binding site of polymerase A BW47_07545 PF01966 HD domain BW47_07545 PF01743 Poly A polymerase head domain BW47_07575 PF04539 Sigma-70 region 3 BW47_07575 PF04542 Sigma-70 region 2 BW47_07575 PF04545 Sigma-70, region 4 BW47_07580 PF03975 CheD chemotactic sensory transduction BW47_07585 PF04509 CheC-like family BW47_07600 PF10609 NUBPL iron-transfer P-loop NTPase BW47_07605 PF00448 SRP54-type protein, GTPase domain BW47_07610 PF00771 FHIPEP family BW47_07835 PF03837 RecT family BW47_07840 PF09588 YqaJ-like viral recombinase domain BW47_07875 PF01726 LexA DNA binding domain BW47_07875 PF00717 Peptidase S24-like BW47_07880 PF01555 DNA methylase BW47_07885 PF18643 BsaWI restriction endonuclease type 2 BW47_07915 PF01925 Sulfite exporter TauE/SafE BW47_07925 PF04468 PSP1 C-terminal conserved region BW47_07930 PF11146 Protein of unknown function (DUF2905) BW47_07935 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BW47_07940 PF05362 Lon protease (S16) C-terminal proteolytic domain BW47_07940 PF00004 ATPase family associated with various cellular activities (AAA) BW47_07940 PF02190 ATP-dependent protease La (LON) substrate-binding domain BW47_07945 PF01926 50S ribosome-binding GTPase BW47_07950 PF05746 DALR anticodon binding domain BW47_07950 PF00750 tRNA synthetases class I (R) BW47_07950 PF03485 Arginyl tRNA synthetase N terminal domain BW47_07955 PF18698 Histidine kinase sensor domain BW47_07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_07955 PF00672 HAMP domain BW47_07955 PF00512 His Kinase A (phospho-acceptor) domain BW47_07955 PF00989 PAS fold BW47_07960 PF08668 HDOD domain BW47_07965 PF02033 Ribosome-binding factor A BW47_07975 PF02465 Flagellar hook-associated protein 2 N-terminus BW47_07975 PF07195 Flagellar hook-associated protein 2 C-terminus BW47_07975 PF07196 Flagellin hook IN motif BW47_07990 PF04055 Radical SAM superfamily BW47_08000 PF03193 RsgA GTPase BW47_08000 PF16745 RsgA N-terminal domain BW47_08005 PF08497 Radical SAM N-terminal BW47_08005 PF04055 Radical SAM superfamily BW47_08005 PF11842 Domain of unknown function (DUF3362) BW47_08010 PF03471 Transporter associated domain BW47_08010 PF00571 CBS domain BW47_08015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BW47_08020 PF02463 RecF/RecN/SMC N terminal domain BW47_08030 PF00533 BRCA1 C Terminus (BRCT) domain BW47_08030 PF01653 NAD-dependent DNA ligase adenylation domain BW47_08030 PF03120 NAD-dependent DNA ligase OB-fold domain BW47_08030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BW47_08030 PF12826 Helix-hairpin-helix motif BW47_08040 PF00575 S1 RNA binding domain BW47_08040 PF00773 RNB domain BW47_08040 PF17876 Cold shock domain BW47_08040 PF08206 Ribonuclease B OB domain BW47_08045 PF01029 NusB family BW47_08045 PF01189 16S rRNA methyltransferase RsmB/F BW47_08050 PF04298 Putative neutral zinc metallopeptidase BW47_08055 PF00072 Response regulator receiver domain BW47_08055 PF00486 Transcriptional regulatory protein, C terminal BW47_08060 PF08032 RNA 2'-O ribose methyltransferase substrate binding BW47_08060 PF00588 SpoU rRNA Methylase family BW47_08065 PF03819 MazG nucleotide pyrophosphohydrolase domain BW47_08070 PF01594 AI-2E family transporter BW47_08095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BW47_08095 PF14579 Helix-hairpin-helix motif BW47_08095 PF07733 Bacterial DNA polymerase III alpha NTPase domain BW47_08100 PF00834 Ribulose-phosphate 3 epimerase family BW47_08105 PF01048 Phosphorylase superfamily BW47_08110 PF01368 DHH family BW47_08110 PF02272 DHHA1 domain BW47_08115 PF00990 Diguanylate cyclase, GGDEF domain BW47_08120 PF01565 FAD binding domain BW47_08120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BW47_08125 PF02127 Aminopeptidase I zinc metalloprotease (M18) BW47_08150 PF01238 Phosphomannose isomerase type I BW47_08160 PF00550 Phosphopantetheine attachment site BW47_08165 PF05491 RuvB C-terminal winged helix domain BW47_08165 PF17864 RuvB AAA lid domain BW47_08165 PF05496 Holliday junction DNA helicase RuvB P-loop domain BW47_08170 PF01168 Alanine racemase, N-terminal domain BW47_08180 PF01513 ATP-NAD kinase BW47_08185 PF01895 PhoU domain BW47_08195 PF05958 tRNA (Uracil-5-)-methyltransferase BW47_08200 PF02142 MGS-like domain BW47_08200 PF01808 AICARFT/IMPCHase bienzyme BW47_08220 PF03462 PCRF domain BW47_08220 PF00472 RF-1 domain BW47_08225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BW47_08250 PF02881 SRP54-type protein, helical bundle domain BW47_08250 PF00448 SRP54-type protein, GTPase domain BW47_08260 PF06725 3D domain BW47_08275 PF11734 TilS substrate C-terminal domain BW47_08275 PF00156 Phosphoribosyl transferase domain BW47_08275 PF01171 PP-loop family BW47_08280 PF03816 Cell envelope-related transcriptional attenuator domain BW47_08285 PF04493 Endonuclease V BW47_08300 PF04055 Radical SAM superfamily BW47_08300 PF16199 Radical_SAM C-terminal domain BW47_08305 PF01979 Amidohydrolase family BW47_08315 PF02875 Mur ligase family, glutamate ligase domain BW47_08315 PF08245 Mur ligase middle domain BW47_08320 PF08264 Anticodon-binding domain of tRNA BW47_08320 PF00133 tRNA synthetases class I (I, L, M and V) BW47_08320 PF10458 Valyl tRNA synthetase tRNA binding arm BW47_08330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BW47_08330 PF13237 4Fe-4S dicluster domain BW47_08330 PF10531 SLBB domain BW47_08330 PF13375 RnfC Barrel sandwich hybrid domain BW47_08335 PF03116 NQR2, RnfD, RnfE family BW47_08345 PF02508 Rnf-Nqr subunit, membrane protein BW47_08350 PF02508 Rnf-Nqr subunit, membrane protein BW47_08360 PF03600 Citrate transporter BW47_08365 PF01699 Sodium/calcium exchanger protein BW47_08370 PF00571 CBS domain BW47_08370 PF00478 IMP dehydrogenase / GMP reductase domain BW47_08375 PF00672 HAMP domain BW47_08375 PF17200 Single Cache domain 2 BW47_08375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_08380 PF00128 Alpha amylase, catalytic domain BW47_08385 PF08241 Methyltransferase domain BW47_08385 PF12697 Alpha/beta hydrolase family BW47_08390 PF03447 Homoserine dehydrogenase, NAD binding domain BW47_08390 PF01958 Domain of unknown function DUF108 BW47_08395 PF02445 Quinolinate synthetase A protein BW47_08400 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BW47_08400 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BW47_08405 PF02801 Beta-ketoacyl synthase, C-terminal domain BW47_08405 PF00109 Beta-ketoacyl synthase, N-terminal domain BW47_08410 PF07977 FabA-like domain BW47_08415 PF03060 Nitronate monooxygenase BW47_08420 PF02632 BioY family BW47_08425 PF00698 Acyl transferase domain BW47_08445 PF01964 Radical SAM ThiC family BW47_08455 PF10120 Thiamine-phosphate synthase BW47_08455 PF08543 Phosphomethylpyrimidine kinase BW47_08460 PF00365 Phosphofructokinase BW47_08465 PF07969 Amidohydrolase family BW47_08465 PF07969 Amidohydrolase family BW47_08470 PF04055 Radical SAM superfamily BW47_08470 PF06968 Biotin and Thiamin Synthesis associated domain BW47_08490 PF00037 4Fe-4S binding domain BW47_08490 PF02256 Iron hydrogenase small subunit BW47_08490 PF02906 Iron only hydrogenase large subunit, C-terminal domain BW47_08490 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BW47_08505 PF00035 Double-stranded RNA binding motif BW47_08505 PF14622 Ribonuclease-III-like BW47_08510 PF02540 NAD synthase BW47_08510 PF00795 Carbon-nitrogen hydrolase BW47_08515 PF08279 HTH domain BW47_08515 PF03099 Biotin/lipoate A/B protein ligase family BW47_08515 PF02237 Biotin protein ligase C terminal domain BW47_08520 PF03023 Lipid II flippase MurJ BW47_08525 PF04060 Putative Fe-S cluster BW47_08530 PF02481 DNA recombination-mediator protein A BW47_08535 PF02569 Pantoate-beta-alanine ligase BW47_08540 PF01055 Glycosyl hydrolases family 31 BW47_08540 PF17137 Domain of unknown function (DUF5110) BW47_08540 PF16338 Domain of unknown function (DUF4968) BW47_08540 PF13802 Galactose mutarotase-like BW47_08545 PF00575 S1 RNA binding domain BW47_08545 PF00013 KH domain BW47_08545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BW47_08545 PF01138 3' exoribonuclease family, domain 1 BW47_08545 PF03725 3' exoribonuclease family, domain 2 BW47_08550 PF05193 Peptidase M16 inactive domain BW47_08550 PF00675 Insulinase (Peptidase family M16) BW47_08555 PF00072 Response regulator receiver domain BW47_08560 PF10431 C-terminal, D2-small domain, of ClpB protein BW47_08560 PF07724 AAA domain (Cdc48 subfamily) BW47_08560 PF00004 ATPase family associated with various cellular activities (AAA) BW47_08565 PF00528 Binding-protein-dependent transport system inner membrane component BW47_08570 PF00528 Binding-protein-dependent transport system inner membrane component BW47_08575 PF00923 Transaldolase/Fructose-6-phosphate aldolase BW47_08580 PF02938 GAD domain BW47_08580 PF00152 tRNA synthetases class II (D, K and N) BW47_08580 PF01336 OB-fold nucleic acid binding domain BW47_08585 PF01740 STAS domain BW47_08590 PF02224 Cytidylate kinase BW47_08595 PF00575 S1 RNA binding domain BW47_08595 PF02401 LytB protein BW47_08600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BW47_08600 PF01926 50S ribosome-binding GTPase BW47_08615 PF01966 HD domain BW47_08615 PF00072 Response regulator receiver domain BW47_08620 PF00468 Ribosomal protein L34 BW47_08625 PF00825 Ribonuclease P BW47_08630 PF01809 Putative membrane protein insertion efficiency factor BW47_08635 PF02096 60Kd inner membrane protein BW47_08640 PF01424 R3H domain BW47_08640 PF14804 Jag N-terminus BW47_08650 PF06826 Predicted Permease Membrane Region BW47_08650 PF02080 TrkA-C domain BW47_08655 PF00120 Glutamine synthetase, catalytic domain BW47_08655 PF03951 Glutamine synthetase, beta-Grasp domain BW47_08660 PF00990 Diguanylate cyclase, GGDEF domain BW47_08670 PF00232 Glycosyl hydrolase family 1 BW47_08720 PF00664 ABC transporter transmembrane region BW47_08720 PF00005 ABC transporter BW47_08735 PF09827 CRISPR associated protein Cas2 BW47_08740 PF01867 CRISPR associated protein Cas1 BW47_08745 PF09827 CRISPR associated protein Cas2 BW47_08795 PF09701 CRISPR-associated protein (Cas_Cmr5) BW47_08840 PF18211 Csm1 subunit domain B BW47_08850 PF03787 RAMP superfamily BW47_08860 PF03787 RAMP superfamily BW47_08915 PF02151 UvrB/uvrC motif BW47_08915 PF12344 Ultra-violet resistance protein B BW47_08915 PF00271 Helicase conserved C-terminal domain BW47_08915 PF17757 UvrB interaction domain BW47_08915 PF04851 Type III restriction enzyme, res subunit BW47_08925 PF02463 RecF/RecN/SMC N terminal domain BW47_08940 PF01555 DNA methylase BW47_08955 PF01934 Protein of unknown function DUF86 BW47_08965 PF00465 Iron-containing alcohol dehydrogenase BW47_08970 PF03600 Citrate transporter BW47_08980 PF00534 Glycosyl transferases group 1 BW47_08985 PF03459 TOBE domain BW47_08985 PF17912 MalK OB fold domain BW47_08985 PF00005 ABC transporter BW47_08990 PF00528 Binding-protein-dependent transport system inner membrane component BW47_08995 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09040 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09045 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09050 PF03459 TOBE domain BW47_09050 PF17912 MalK OB fold domain BW47_09050 PF00005 ABC transporter BW47_09055 PF00534 Glycosyl transferases group 1 BW47_09070 PF01925 Sulfite exporter TauE/SafE BW47_09075 PF01546 Peptidase family M20/M25/M40 BW47_09090 PF00905 Penicillin binding protein transpeptidase domain BW47_09090 PF03717 Penicillin-binding Protein dimerisation domain BW47_09090 PF03793 PASTA domain BW47_09100 PF01795 MraW methylase family BW47_09105 PF01979 Amidohydrolase family BW47_09110 PF00291 Pyridoxal-phosphate dependent enzyme BW47_09115 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BW47_09115 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BW47_09120 PF13382 Adenine deaminase C-terminal domain BW47_09120 PF01979 Amidohydrolase family BW47_09125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_09125 PF00005 ABC transporter BW47_09130 PF00005 ABC transporter BW47_09130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BW47_09140 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09145 PF02151 UvrB/uvrC motif BW47_09145 PF01541 GIY-YIG catalytic domain BW47_09145 PF08459 UvrC Helix-hairpin-helix N-terminal BW47_09155 PF01597 Glycine cleavage H-protein BW47_09160 PF07670 Nucleoside recognition BW47_09160 PF02421 Ferrous iron transport protein B BW47_09160 PF04023 FeoA domain BW47_09160 PF07664 Ferrous iron transport protein B C terminus BW47_09160 PF17910 FeoB cytosolic helical domain BW47_09175 PF10531 SLBB domain BW47_09180 PF01875 Memo-like protein BW47_09185 PF00263 Bacterial type II and III secretion system protein BW47_09185 PF03958 Bacterial type II/III secretion system short domain BW47_09215 PF00482 Type II secretion system (T2SS), protein F BW47_09220 PF00005 ABC transporter BW47_09225 PF05175 Methyltransferase small domain BW47_09245 PF01649 Ribosomal protein S20 BW47_09250 PF02772 S-adenosylmethionine synthetase, central domain BW47_09250 PF00438 S-adenosylmethionine synthetase, N-terminal domain BW47_09250 PF02773 S-adenosylmethionine synthetase, C-terminal domain BW47_09265 PF16360 GTP-binding GTPase Middle Region BW47_09265 PF01926 50S ribosome-binding GTPase BW47_09265 PF13167 GTP-binding GTPase N-terminal BW47_09270 PF17209 Hfq protein BW47_09285 PF00485 Phosphoribulokinase / Uridine kinase family BW47_09290 PF10150 Ribonuclease E/G family BW47_09290 PF00575 S1 RNA binding domain BW47_09295 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BW47_09295 PF05221 S-adenosyl-L-homocysteine hydrolase BW47_09305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BW47_09320 PF00072 Response regulator receiver domain BW47_09320 PF01339 CheB methylesterase BW47_09325 PF00395 S-layer homology domain BW47_09350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_09355 PF00221 Aromatic amino acid lyase BW47_09360 PF01923 Cobalamin adenosyltransferase BW47_09395 PF05343 M42 glutamyl aminopeptidase BW47_09420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BW47_09420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BW47_09425 PF02390 Putative methyltransferase BW47_09435 PF03853 YjeF-related protein N-terminus BW47_09435 PF01256 Carbohydrate kinase BW47_09440 PF14718 Soluble lytic murein transglycosylase L domain BW47_09440 PF01464 Transglycosylase SLT domain BW47_09445 PF06750 Bacterial Peptidase A24 N-terminal domain BW47_09445 PF01478 Type IV leader peptidase family BW47_09455 PF17820 PDZ domain BW47_09455 PF13180 PDZ domain BW47_09460 PF00343 Carbohydrate phosphorylase BW47_09465 PF10502 Signal peptidase, peptidase S26 BW47_09470 PF01245 Ribosomal protein L19 BW47_09475 PF09936 SAM-dependent RNA methyltransferase BW47_09480 PF01746 tRNA (Guanine-1)-methyltransferase BW47_09485 PF01782 RimM N-terminal domain BW47_09485 PF05239 PRC-barrel domain BW47_09495 PF00886 Ribosomal protein S16 BW47_09500 PF02881 SRP54-type protein, helical bundle domain BW47_09500 PF00448 SRP54-type protein, GTPase domain BW47_09500 PF02978 Signal peptide binding domain BW47_09505 PF01547 Bacterial extracellular solute-binding protein BW47_09510 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BW47_09540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BW47_09550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_09555 PF01966 HD domain BW47_09560 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09565 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09570 PF01547 Bacterial extracellular solute-binding protein BW47_09575 PF00534 Glycosyl transferases group 1 BW47_09585 PF00512 His Kinase A (phospho-acceptor) domain BW47_09585 PF16736 Single Cache-like BW47_09585 PF00989 PAS fold BW47_09585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_09590 PF00072 Response regulator receiver domain BW47_09590 PF00486 Transcriptional regulatory protein, C terminal BW47_09595 PF01895 PhoU domain BW47_09600 PF00005 ABC transporter BW47_09605 PF00528 Binding-protein-dependent transport system inner membrane component BW47_09615 PF12849 PBP superfamily domain BW47_09620 PF00171 Aldehyde dehydrogenase family BW47_09625 PF13302 Acetyltransferase (GNAT) domain BW47_09630 PF01047 MarR family BW47_09640 PF00294 pfkB family carbohydrate kinase BW47_09650 PF02361 Cobalt transport protein BW47_09655 PF03030 Inorganic H+ pyrophosphatase BW47_09660 PF00486 Transcriptional regulatory protein, C terminal BW47_09660 PF00072 Response regulator receiver domain BW47_09665 PF13426 PAS domain BW47_09665 PF00512 His Kinase A (phospho-acceptor) domain BW47_09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BW47_09665 PF00672 HAMP domain BW47_09670 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BW47_09670 PF02885 Glycosyl transferase family, helical bundle domain BW47_09670 PF00591 Glycosyl transferase family, a/b domain BW47_09680 PF00156 Phosphoribosyl transferase domain BW47_09685 PF00342 Phosphoglucose isomerase BW47_09695 PF01121 Dephospho-CoA kinase BW47_09700 PF17155 Gammaproteobacterial periplasmic sensor domain BW47_09700 PF00990 Diguanylate cyclase, GGDEF domain BW47_09705 PF17757 UvrB interaction domain BW47_09705 PF04851 Type III restriction enzyme, res subunit BW47_09705 PF02151 UvrB/uvrC motif BW47_09705 PF12344 Ultra-violet resistance protein B BW47_09705 PF00271 Helicase conserved C-terminal domain BW47_09715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BW47_09745 PF05636 HIGH Nucleotidyl Transferase BW47_09750 PF17757 UvrB interaction domain BW47_09750 PF03461 TRCF domain BW47_09750 PF00271 Helicase conserved C-terminal domain BW47_09750 PF00270 DEAD/DEAH box helicase BW47_09750 PF02559 CarD-like/TRCF domain BW47_09765 PF02457 DisA bacterial checkpoint controller nucleotide-binding BW47_09765 PF10635 DisA bacterial checkpoint controller linker region BW47_09765 PF00633 Helix-hairpin-helix motif BW47_09770 PF01174 SNO glutamine amidotransferase family BW47_09775 PF01680 SOR/SNZ family BW47_09785 PF00596 Class II Aldolase and Adducin N-terminal domain BW47_09795 PF02152 Dihydroneopterin aldolase BW47_09795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BW47_09800 PF02436 Conserved carboxylase domain BW47_09800 PF00682 HMGL-like BW47_09800 PF00364 Biotin-requiring enzyme BW47_09805 PF04760 Translation initiation factor IF-2, N-terminal region BW47_09805 PF00009 Elongation factor Tu GTP binding domain BW47_09805 PF11987 Translation-initiation factor 2 BW47_09815 PF00672 HAMP domain BW47_09815 PF17202 Single cache domain 3 BW47_09815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BW47_09830 PF00549 CoA-ligase BW47_09830 PF08442 ATP-grasp domain BW47_09835 PF02629 CoA binding domain BW47_09835 PF00549 CoA-ligase BW47_09840 PF06826 Predicted Permease Membrane Region BW47_09840 PF02080 TrkA-C domain BW47_09845 PF01118 Semialdehyde dehydrogenase, NAD binding domain BW47_09845 PF02774 Semialdehyde dehydrogenase, dimerisation domain BW47_09850 PF01678 Diaminopimelate epimerase BW47_09855 PF00701 Dihydrodipicolinate synthetase family BW47_09860 PF05173 Dihydrodipicolinate reductase, C-terminus BW47_09860 PF01113 Dihydrodipicolinate reductase, N-terminus BW47_09865 PF00132 Bacterial transferase hexapeptide (six repeats) BW47_09865 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BW47_09870 PF00696 Amino acid kinase family BW47_09870 PF13840 ACT domain BW47_09875 PF00202 Aminotransferase class-III BW47_09885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BW47_09890 PF00795 Carbon-nitrogen hydrolase BW47_09905 PF01571 Aminomethyltransferase folate-binding domain BW47_09905 PF08669 Glycine cleavage T-protein C-terminal barrel domain BW47_09910 PF02347 Glycine cleavage system P-protein BW47_09915 PF02347 Glycine cleavage system P-protein BW47_09920 PF00465 Iron-containing alcohol dehydrogenase BW47_09925 PF17785 PUA-like domain BW47_09925 PF10672 S-adenosylmethionine-dependent methyltransferase BW47_09935 PF00293 NUDIX domain BW47_09940 PF01546 Peptidase family M20/M25/M40 BW47_09940 PF07687 Peptidase dimerisation domain BW47_09945 PF17391 Urocanase N-terminal domain BW47_09945 PF17392 Urocanase C-terminal domain BW47_09945 PF01175 Urocanase Rossmann-like domain BW47_09965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BW47_09965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BW47_09965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BW47_09975 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BW47_09980 PF09115 DNA polymerase III, delta subunit, C terminal BW47_09985 PF00005 ABC transporter BW47_09990 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase BW47_09995 PF00365 Phosphofructokinase BW47_10000 PF03030 Inorganic H+ pyrophosphatase BW47_10005 PF02355 Protein export membrane protein BW47_10005 PF07549 SecD/SecF GG Motif BW47_10010 PF02355 Protein export membrane protein BW47_10010 PF07549 SecD/SecF GG Motif BW47_10015 PF02699 Preprotein translocase subunit BW47_10020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BW47_10020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BW47_10030 PF02511 Thymidylate synthase complementing protein BW47_10035 PF01351 Ribonuclease HII BW47_10050 PF02146 Sir2 family BW47_10065 PF13742 OB-fold nucleic acid binding domain BW47_10065 PF02601 Exonuclease VII, large subunit BW47_10070 PF00476 DNA polymerase family A BW47_10070 PF01367 5'-3' exonuclease, C-terminal SAM fold BW47_10070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BW47_10080 PF02491 SHS2 domain inserted in FTSA BW47_10085 PF00488 MutS domain V BW47_10085 PF01713 Smr domain BW47_10095 PF01384 Phosphate transporter family BW47_10110 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BW47_10115 PF00158 Sigma-54 interaction domain BW47_10115 PF00072 Response regulator receiver domain BW47_10115 PF02954 Bacterial regulatory protein, Fis family BW47_10120 PF00696 Amino acid kinase family BW47_10125 PF01515 Phosphate acetyl/butaryl transferase