locus-tag class description Tmel_0001 PF11638 DnaA N-terminal domain Tmel_0001 PF08299 Bacterial dnaA protein helix-turn-helix Tmel_0001 PF00308 Bacterial dnaA protein Tmel_0007 PF00005 ABC transporter Tmel_0008 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0008 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tmel_0014 PF00171 Aldehyde dehydrogenase family Tmel_0021 PF02592 Putative vitamin uptake transporter Tmel_0022 PF02645 Uncharacterised protein, DegV family COG1307 Tmel_0023 PF18073 Rubredoxin metal binding domain Tmel_0024 PF17871 AAA lid domain Tmel_0024 PF07724 AAA domain (Cdc48 subfamily) Tmel_0024 PF02861 Clp amino terminal domain, pathogenicity island component Tmel_0024 PF10431 C-terminal, D2-small domain, of ClpB protein Tmel_0024 PF00004 ATPase family associated with various cellular activities (AAA) Tmel_0031 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0032 PF00857 Isochorismatase family Tmel_0033 PF04055 Radical SAM superfamily Tmel_0033 PF06968 Biotin and Thiamin Synthesis associated domain Tmel_0034 PF00271 Helicase conserved C-terminal domain Tmel_0034 PF00270 DEAD/DEAH box helicase Tmel_0034 PF17191 RecG wedge domain Tmel_0035 PF00005 ABC transporter Tmel_0036 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain Tmel_0036 PF04263 Thiamin pyrophosphokinase, catalytic domain Tmel_0037 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tmel_0037 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tmel_0037 PF13288 DXP reductoisomerase C-terminal domain Tmel_0038 PF01497 Periplasmic binding protein Tmel_0039 PF01032 FecCD transport family Tmel_0041 PF03979 Sigma-70 factor, region 1.1 Tmel_0041 PF00140 Sigma-70 factor, region 1.2 Tmel_0041 PF04542 Sigma-70 region 2 Tmel_0041 PF04545 Sigma-70, region 4 Tmel_0041 PF04539 Sigma-70 region 3 Tmel_0042 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tmel_0043 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tmel_0043 PF00925 GTP cyclohydrolase II Tmel_0044 PF00677 Lumazine binding domain Tmel_0045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tmel_0045 PF01872 RibD C-terminal domain Tmel_0046 PF02743 Cache domain Tmel_0046 PF00672 HAMP domain Tmel_0046 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0047 PF01592 NifU-like N terminal domain Tmel_0048 PF00266 Aminotransferase class-V Tmel_0050 PF01458 Uncharacterized protein family (UPF0051) Tmel_0051 PF00005 ABC transporter Tmel_0052 PF00118 TCP-1/cpn60 chaperonin family Tmel_0053 PF00166 Chaperonin 10 Kd subunit Tmel_0054 PF00636 Ribonuclease III domain Tmel_0056 PF01523 Putative modulator of DNA gyrase Tmel_0057 PF01523 Putative modulator of DNA gyrase Tmel_0058 PF01168 Alanine racemase, N-terminal domain Tmel_0060 PF02547 Queuosine biosynthesis protein Tmel_0061 PF00312 Ribosomal protein S15 Tmel_0063 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmel_0063 PF04073 Aminoacyl-tRNA editing domain Tmel_0063 PF03129 Anticodon binding domain Tmel_0064 PF01406 tRNA synthetases class I (C) catalytic domain Tmel_0064 PF09190 DALR domain Tmel_0065 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tmel_0066 PF00860 Permease family Tmel_0071 PF04055 Radical SAM superfamily Tmel_0071 PF00919 Uncharacterized protein family UPF0004 Tmel_0071 PF01938 TRAM domain Tmel_0072 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Tmel_0072 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tmel_0073 PF00857 Isochorismatase family Tmel_0074 PF01545 Cation efflux family Tmel_0077 PF00534 Glycosyl transferases group 1 Tmel_0077 PF08323 Starch synthase catalytic domain Tmel_0079 PF00989 PAS fold Tmel_0079 PF02954 Bacterial regulatory protein, Fis family Tmel_0079 PF00158 Sigma-54 interaction domain Tmel_0080 PF01894 Uncharacterised protein family UPF0047 Tmel_0081 PF07478 D-ala D-ala ligase C-terminus Tmel_0081 PF01820 D-ala D-ala ligase N-terminus Tmel_0083 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain Tmel_0083 PF02558 Ketopantoate reductase PanE/ApbA Tmel_0084 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmel_0084 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmel_0085 PF05161 MOFRL family Tmel_0085 PF13660 Domain of unknown function (DUF4147) Tmel_0086 PF02540 NAD synthase Tmel_0087 PF01556 DnaJ C terminal domain Tmel_0087 PF00684 DnaJ central domain Tmel_0087 PF00226 DnaJ domain Tmel_0088 PF01025 GrpE Tmel_0089 PF01628 HrcA protein C terminal domain Tmel_0090 PF07690 Major Facilitator Superfamily Tmel_0091 PF08279 HTH domain Tmel_0091 PF02829 3H domain Tmel_0092 PF03006 Haemolysin-III related Tmel_0093 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Tmel_0095 PF13186 Iron-sulfur cluster-binding domain Tmel_0095 PF04055 Radical SAM superfamily Tmel_0096 PF05343 M42 glutamyl aminopeptidase Tmel_0098 PF01192 RNA polymerase Rpb6 Tmel_0099 PF00625 Guanylate kinase Tmel_0100 PF04025 Domain of unknown function (DUF370) Tmel_0107 PF00871 Acetokinase family Tmel_0108 PF01515 Phosphate acetyl/butaryl transferase Tmel_0109 PF00871 Acetokinase family Tmel_0110 PF00155 Aminotransferase class I and II Tmel_0111 PF00266 Aminotransferase class-V Tmel_0112 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmel_0112 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmel_0113 PF13722 5TM C-terminal transporter carbon starvation CstA Tmel_0113 PF02554 Carbon starvation protein CstA Tmel_0114 PF04397 LytTr DNA-binding domain Tmel_0114 PF00072 Response regulator receiver domain Tmel_0115 PF07694 5TMR of 5TMR-LYT Tmel_0115 PF06580 Histidine kinase Tmel_0117 PF01546 Peptidase family M20/M25/M40 Tmel_0117 PF07687 Peptidase dimerisation domain Tmel_0118 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmel_0118 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmel_0119 PF01979 Amidohydrolase family Tmel_0120 PF01979 Amidohydrolase family Tmel_0121 PF01180 Dihydroorotate dehydrogenase Tmel_0122 PF04232 Stage V sporulation protein S (SpoVS) Tmel_0123 PF00149 Calcineurin-like phosphoesterase Tmel_0123 PF02872 5'-nucleotidase, C-terminal domain Tmel_0124 PF00664 ABC transporter transmembrane region Tmel_0124 PF00005 ABC transporter Tmel_0130 PF02926 THUMP domain Tmel_0130 PF02568 Thiamine biosynthesis protein (ThiI) Tmel_0132 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain Tmel_0132 PF00877 NlpC/P60 family Tmel_0133 PF00005 ABC transporter Tmel_0133 PF00664 ABC transporter transmembrane region Tmel_0134 PF00005 ABC transporter Tmel_0134 PF00664 ABC transporter transmembrane region Tmel_0135 PF01047 MarR family Tmel_0136 PF01835 MG2 domain Tmel_0136 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Tmel_0136 PF07678 A-macroglobulin TED domain Tmel_0136 PF00207 Alpha-2-macroglobulin family Tmel_0136 PF07703 Alpha-2-macroglobulin bait region domain Tmel_0138 PF06672 Protein of unknown function (DUF1175) Tmel_0139 PF00465 Iron-containing alcohol dehydrogenase Tmel_0141 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmel_0141 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0144 PF00672 HAMP domain Tmel_0144 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0146 PF08439 Oligopeptidase F Tmel_0146 PF01432 Peptidase family M3 Tmel_0147 PF01554 MatE Tmel_0148 PF00248 Aldo/keto reductase family Tmel_0149 PF02073 Thermophilic metalloprotease (M29) Tmel_0151 PF00005 ABC transporter Tmel_0153 PF12002 MgsA AAA+ ATPase C terminal Tmel_0153 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tmel_0153 PF16193 AAA C-terminal domain Tmel_0153 PF01661 Macro domain Tmel_0154 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tmel_0154 PF12002 MgsA AAA+ ATPase C terminal Tmel_0154 PF01661 Macro domain Tmel_0154 PF16193 AAA C-terminal domain Tmel_0155 PF16363 GDP-mannose 4,6 dehydratase Tmel_0157 PF03167 Uracil DNA glycosylase superfamily Tmel_0158 PF02896 PEP-utilising enzyme, TIM barrel domain Tmel_0158 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tmel_0158 PF00391 PEP-utilising enzyme, mobile domain Tmel_0160 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_0160 PF12804 MobA-like NTP transferase domain Tmel_0161 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tmel_0161 PF14572 Phosphoribosyl synthetase-associated domain Tmel_0162 PF01386 Ribosomal L25p family Tmel_0162 PF14693 Ribosomal protein TL5, C-terminal domain Tmel_0163 PF01195 Peptidyl-tRNA hydrolase Tmel_0168 PF17760 UvrA interaction domain Tmel_0168 PF00005 ABC transporter Tmel_0168 PF17755 UvrA DNA-binding domain Tmel_0169 PF00589 Phage integrase family Tmel_0169 PF02899 Phage integrase, N-terminal SAM-like domain Tmel_0174 PF00113 Enolase, C-terminal TIM barrel domain Tmel_0174 PF03952 Enolase, N-terminal domain Tmel_0176 PF00395 S-layer homology domain Tmel_0177 PF01479 S4 domain Tmel_0177 PF00579 tRNA synthetases class I (W and Y) Tmel_0179 PF01938 TRAM domain Tmel_0179 PF00919 Uncharacterized protein family UPF0004 Tmel_0179 PF04055 Radical SAM superfamily Tmel_0180 PF02926 THUMP domain Tmel_0180 PF01170 Putative RNA methylase family UPF0020 Tmel_0181 PF02641 Uncharacterized ACR, COG1993 Tmel_0182 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tmel_0184 PF01725 Ham1 family Tmel_0185 PF02590 Predicted SPOUT methyltransferase Tmel_0188 PF01551 Peptidase family M23 Tmel_0188 PF04225 Opacity-associated protein A LysM-like domain Tmel_0189 PF03061 Thioesterase superfamily Tmel_0190 PF05853 beta-keto acid cleavage enzyme Tmel_0192 PF04055 Radical SAM superfamily Tmel_0192 PF12544 Lysine-2,3-aminomutase Tmel_0193 PF01575 MaoC like domain Tmel_0195 PF05190 MutS family domain IV Tmel_0195 PF01624 MutS domain I Tmel_0195 PF05188 MutS domain II Tmel_0195 PF05192 MutS domain III Tmel_0195 PF00488 MutS domain V Tmel_0196 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Tmel_0197 PF02310 B12 binding domain Tmel_0197 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Tmel_0200 PF14489 QueF-like protein Tmel_0206 PF00004 ATPase family associated with various cellular activities (AAA) Tmel_0206 PF17862 AAA+ lid domain Tmel_0206 PF01434 Peptidase family M41 Tmel_0207 PF11734 TilS substrate C-terminal domain Tmel_0207 PF01171 PP-loop family Tmel_0210 PF02673 Bacitracin resistance protein BacA Tmel_0211 PF01979 Amidohydrolase family Tmel_0214 PF02545 Maf-like protein Tmel_0215 PF04002 RadC-like JAB domain Tmel_0218 PF00535 Glycosyl transferase family 2 Tmel_0219 PF01501 Glycosyl transferase family 8 Tmel_0219 PF00535 Glycosyl transferase family 2 Tmel_0224 PF13180 PDZ domain Tmel_0224 PF03572 Peptidase family S41 Tmel_0225 PF01209 ubiE/COQ5 methyltransferase family Tmel_0228 PF01966 HD domain Tmel_0230 PF00227 Proteasome subunit Tmel_0231 PF03481 Putative GTP-binding controlling metal-binding Tmel_0231 PF01300 Telomere recombination Tmel_0233 PF06421 GTP-binding protein LepA C-terminus Tmel_0233 PF03144 Elongation factor Tu domain 2 Tmel_0233 PF00679 Elongation factor G C-terminus Tmel_0233 PF00009 Elongation factor Tu GTP binding domain Tmel_0234 PF02875 Mur ligase family, glutamate ligase domain Tmel_0234 PF08245 Mur ligase middle domain Tmel_0235 PF01134 Glucose inhibited division protein A Tmel_0236 PF00551 Formyl transferase Tmel_0236 PF02911 Formyl transferase, C-terminal domain Tmel_0237 PF00398 Ribosomal RNA adenine dimethylase Tmel_0239 PF02542 YgbB family Tmel_0241 PF00483 Nucleotidyl transferase Tmel_0241 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_0242 PF00483 Nucleotidyl transferase Tmel_0242 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_0243 PF01791 DeoC/LacD family aldolase Tmel_0244 PF01668 SmpB protein Tmel_0245 PF02686 Glu-tRNAGln amidotransferase C subunit Tmel_0246 PF02599 Global regulator protein family Tmel_0247 PF02623 FliW protein Tmel_0250 PF13684 Dihydroxyacetone kinase family Tmel_0250 PF02734 DAK2 domain Tmel_0252 PF02779 Transketolase, pyrimidine binding domain Tmel_0252 PF02780 Transketolase, C-terminal domain Tmel_0252 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tmel_0253 PF02403 Seryl-tRNA synthetase N-terminal domain Tmel_0253 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmel_0254 PF01008 Initiation factor 2 subunit family Tmel_0256 PF08264 Anticodon-binding domain of tRNA Tmel_0256 PF09334 tRNA synthetases class I (M) Tmel_0256 PF00133 tRNA synthetases class I (I, L, M and V) Tmel_0256 PF13603 Leucyl-tRNA synthetase, Domain 2 Tmel_0257 PF04452 RNA methyltransferase Tmel_0260 PF02163 Peptidase family M50 Tmel_0260 PF17820 PDZ domain Tmel_0261 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0261 PF00072 Response regulator receiver domain Tmel_0262 PF00072 Response regulator receiver domain Tmel_0263 PF04551 GcpE protein Tmel_0266 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tmel_0267 PF01180 Dihydroorotate dehydrogenase Tmel_0268 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tmel_0269 PF00156 Phosphoribosyl transferase domain Tmel_0271 PF01266 FAD dependent oxidoreductase Tmel_0274 PF17674 HHH domain Tmel_0274 PF00575 S1 RNA binding domain Tmel_0274 PF09371 Tex-like protein N-terminal domain Tmel_0274 PF16921 Tex protein YqgF-like domain Tmel_0275 PF01584 CheW-like domain Tmel_0276 PF04851 Type III restriction enzyme, res subunit Tmel_0276 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tmel_0276 PF18074 Primosomal protein N C-terminal domain Tmel_0276 PF17764 3′ DNA-binding domain (3′BD) Tmel_0278 PF00313 'Cold-shock' DNA-binding domain Tmel_0279 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmel_0280 PF03099 Biotin/lipoate A/B protein ligase family Tmel_0284 PF02261 Aspartate decarboxylase Tmel_0285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_0285 PF00512 His Kinase A (phospho-acceptor) domain Tmel_0285 PF00989 PAS fold Tmel_0285 PF13188 PAS domain Tmel_0285 PF13426 PAS domain Tmel_0286 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Tmel_0286 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tmel_0288 PF02645 Uncharacterised protein, DegV family COG1307 Tmel_0289 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tmel_0290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmel_0290 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmel_0291 PF00231 ATP synthase Tmel_0292 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmel_0292 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmel_0292 PF00306 ATP synthase alpha/beta chain, C terminal domain Tmel_0293 PF00213 ATP synthase delta (OSCP) subunit Tmel_0294 PF00430 ATP synthase B/B' CF(0) Tmel_0295 PF00137 ATP synthase subunit C Tmel_0296 PF00119 ATP synthase A chain Tmel_0299 PF00557 Metallopeptidase family M24 Tmel_0299 PF01321 Creatinase/Prolidase N-terminal domain Tmel_0300 PF03652 Holliday junction resolvase Tmel_0301 PF17768 RecJ OB domain Tmel_0301 PF01368 DHH family Tmel_0301 PF02272 DHHA1 domain Tmel_0301 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Tmel_0302 PF01430 Hsp33 protein Tmel_0303 PF00989 PAS fold Tmel_0303 PF00512 His Kinase A (phospho-acceptor) domain Tmel_0303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_0303 PF18698 Histidine kinase sensor domain Tmel_0303 PF00672 HAMP domain Tmel_0304 PF01268 Formate--tetrahydrofolate ligase Tmel_0305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmel_0305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmel_0307 PF04556 DpnII restriction endonuclease Tmel_0308 PF02086 D12 class N6 adenine-specific DNA methyltransferase Tmel_0310 PF00550 Phosphopantetheine attachment site Tmel_0312 PF01230 HIT domain Tmel_0313 PF00709 Adenylosuccinate synthetase Tmel_0315 PF12706 Beta-lactamase superfamily domain Tmel_0316 PF13941 MutL protein Tmel_0318 PF00288 GHMP kinases N terminal domain Tmel_0319 PF13654 AAA domain Tmel_0319 PF05362 Lon protease (S16) C-terminal proteolytic domain Tmel_0320 PF00579 tRNA synthetases class I (W and Y) Tmel_0321 PF05552 Conserved TM helix Tmel_0321 PF00924 Mechanosensitive ion channel Tmel_0322 PF00672 HAMP domain Tmel_0322 PF02743 Cache domain Tmel_0322 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0328 PF00460 Flagella basal body rod protein Tmel_0328 PF00460 Flagella basal body rod protein Tmel_0328 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmel_0328 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmel_0331 PF00211 Adenylate and Guanylate cyclase catalytic domain Tmel_0335 PF00072 Response regulator receiver domain Tmel_0335 PF01966 HD domain Tmel_0336 PF03315 Serine dehydratase beta chain Tmel_0337 PF03313 Serine dehydratase alpha chain Tmel_0339 PF03065 Glycosyl hydrolase family 57 Tmel_0339 PF09210 Domain of unknown function (DUF1957) Tmel_0340 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmel_0342 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmel_0342 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmel_0343 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmel_0344 PF00953 Glycosyl transferase family 4 Tmel_0346 PF02743 Cache domain Tmel_0346 PF00672 HAMP domain Tmel_0346 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0347 PF09827 CRISPR associated protein Cas2 Tmel_0348 PF01867 CRISPR associated protein Cas1 Tmel_0359 PF01435 Peptidase family M48 Tmel_0359 PF16491 CAAX prenyl protease N-terminal, five membrane helices Tmel_0364 PF13439 Glycosyltransferase Family 4 Tmel_0364 PF00534 Glycosyl transferases group 1 Tmel_0366 PF02350 UDP-N-acetylglucosamine 2-epimerase Tmel_0367 PF00271 Helicase conserved C-terminal domain Tmel_0367 PF00570 HRDC domain Tmel_0367 PF00270 DEAD/DEAH box helicase Tmel_0367 PF16124 RecQ zinc-binding Tmel_0367 PF09382 RQC domain Tmel_0372 PF01018 GTP1/OBG Tmel_0372 PF09269 Domain of unknown function (DUF1967) Tmel_0372 PF01926 50S ribosome-binding GTPase Tmel_0373 PF01467 Cytidylyltransferase-like Tmel_0374 PF01207 Dihydrouridine synthase (Dus) Tmel_0376 PF00155 Aminotransferase class I and II Tmel_0377 PF04029 2-phosphosulpholactate phosphatase Tmel_0379 PF00912 Transglycosylase Tmel_0379 PF14814 Bifunctional transglycosylase second domain Tmel_0379 PF00905 Penicillin binding protein transpeptidase domain Tmel_0381 PF00334 Nucleoside diphosphate kinase Tmel_0383 PF13203 Putative metallopeptidase domain Tmel_0383 PF09967 VWA-like domain (DUF2201) Tmel_0385 PF00586 AIR synthase related protein, N-terminal domain Tmel_0385 PF02769 AIR synthase related protein, C-terminal domain Tmel_0386 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tmel_0386 PF02843 Phosphoribosylglycinamide synthetase, C domain Tmel_0386 PF02844 Phosphoribosylglycinamide synthetase, N domain Tmel_0387 PF01808 AICARFT/IMPCHase bienzyme Tmel_0387 PF02142 MGS-like domain Tmel_0388 PF00551 Formyl transferase Tmel_0389 PF00156 Phosphoribosyl transferase domain Tmel_0394 PF01926 50S ribosome-binding GTPase Tmel_0394 PF07650 KH domain Tmel_0398 PF01381 Helix-turn-helix Tmel_0402 PF11867 Domain of unknown function (DUF3387) Tmel_0402 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Tmel_0402 PF18766 SWI2/SNF2 ATPase Tmel_0405 PF02384 N-6 DNA Methylase Tmel_0405 PF12161 HsdM N-terminal domain Tmel_0406 PF00005 ABC transporter Tmel_0408 PF17820 PDZ domain Tmel_0408 PF03572 Peptidase family S41 Tmel_0408 PF01471 Putative peptidoglycan binding domain Tmel_0410 PF09339 IclR helix-turn-helix domain Tmel_0410 PF01614 Bacterial transcriptional regulator Tmel_0412 PF00753 Metallo-beta-lactamase superfamily Tmel_0413 PF02861 Clp amino terminal domain, pathogenicity island component Tmel_0413 PF07724 AAA domain (Cdc48 subfamily) Tmel_0413 PF17871 AAA lid domain Tmel_0413 PF10431 C-terminal, D2-small domain, of ClpB protein Tmel_0413 PF00004 ATPase family associated with various cellular activities (AAA) Tmel_0414 PF00301 Rubredoxin Tmel_0417 PF01479 S4 domain Tmel_0417 PF00849 RNA pseudouridylate synthase Tmel_0418 PF16363 GDP-mannose 4,6 dehydratase Tmel_0419 PF13361 UvrD-like helicase C-terminal domain Tmel_0419 PF00580 UvrD/REP helicase N-terminal domain Tmel_0419 PF12705 PD-(D/E)XK nuclease superfamily Tmel_0424 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Tmel_0424 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Tmel_0425 PF08544 GHMP kinases C terminal Tmel_0425 PF00288 GHMP kinases N terminal domain Tmel_0425 PF10509 Galactokinase galactose-binding signature Tmel_0429 PF00216 Bacterial DNA-binding protein Tmel_0430 PF01202 Shikimate kinase Tmel_0431 PF01894 Uncharacterised protein family UPF0047 Tmel_0433 PF01297 Zinc-uptake complex component A periplasmic Tmel_0434 PF00005 ABC transporter Tmel_0435 PF00950 ABC 3 transport family Tmel_0437 PF06574 FAD synthetase Tmel_0437 PF01687 Riboflavin kinase Tmel_0438 PF00730 HhH-GPD superfamily base excision DNA repair protein Tmel_0438 PF10576 Iron-sulfur binding domain of endonuclease III Tmel_0438 PF00633 Helix-hairpin-helix motif Tmel_0439 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tmel_0441 PF00860 Permease family Tmel_0451 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0451 PF02743 Cache domain Tmel_0451 PF00672 HAMP domain Tmel_0454 PF13732 Domain of unknown function (DUF4162) Tmel_0454 PF00005 ABC transporter Tmel_0457 PF00440 Bacterial regulatory proteins, tetR family Tmel_0457 PF08360 QacR-like protein, C-terminal region Tmel_0458 PF00128 Alpha amylase, catalytic domain Tmel_0458 PF11896 Domain of unknown function (DUF3416) Tmel_0459 PF00128 Alpha amylase, catalytic domain Tmel_0459 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tmel_0459 PF03714 Bacterial pullanase-associated domain Tmel_0460 PF00072 Response regulator receiver domain Tmel_0460 PF00486 Transcriptional regulatory protein, C terminal Tmel_0461 PF08264 Anticodon-binding domain of tRNA Tmel_0461 PF00133 tRNA synthetases class I (I, L, M and V) Tmel_0461 PF06827 Zinc finger found in FPG and IleRS Tmel_0463 PF00892 EamA-like transporter family Tmel_0465 PF00460 Flagella basal body rod protein Tmel_0465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmel_0466 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmel_0466 PF00460 Flagella basal body rod protein Tmel_0467 PF09820 Predicted AAA-ATPase Tmel_0467 PF08011 PD-(D/E)XK nuclease superfamily Tmel_0468 PF00005 ABC transporter Tmel_0470 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tmel_0471 PF01380 SIS domain Tmel_0472 PF02504 Fatty acid synthesis protein Tmel_0473 PF01783 Ribosomal L32p protein family Tmel_0476 PF01514 Secretory protein of YscJ/FliF family Tmel_0476 PF08345 Flagellar M-ring protein C-terminal Tmel_0477 PF14842 FliG N-terminal domain Tmel_0477 PF01706 FliG C-terminal domain Tmel_0477 PF14841 FliG middle domain Tmel_0478 PF00929 Exonuclease Tmel_0479 PF02562 PhoH-like protein Tmel_0479 PF13638 PIN domain Tmel_0482 PF00696 Amino acid kinase family Tmel_0483 PF01926 50S ribosome-binding GTPase Tmel_0484 PF13690 Chemotaxis phosphatase CheX Tmel_0485 PF01048 Phosphorylase superfamily Tmel_0486 PF07478 D-ala D-ala ligase C-terminus Tmel_0486 PF01820 D-ala D-ala ligase N-terminus Tmel_0487 PF00561 alpha/beta hydrolase fold Tmel_0487 PF08386 TAP-like protein Tmel_0488 PF01225 Mur ligase family, catalytic domain Tmel_0488 PF02875 Mur ligase family, glutamate ligase domain Tmel_0488 PF08245 Mur ligase middle domain Tmel_0489 PF06971 Putative DNA-binding protein N-terminus Tmel_0489 PF02629 CoA binding domain Tmel_0490 PF02906 Iron only hydrogenase large subunit, C-terminal domain Tmel_0490 PF02256 Iron hydrogenase small subunit Tmel_0490 PF12838 4Fe-4S dicluster domain Tmel_0491 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmel_0491 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmel_0491 PF00037 4Fe-4S binding domain Tmel_0497 PF11849 Domain of unknown function (DUF3369) Tmel_0498 PF00512 His Kinase A (phospho-acceptor) domain Tmel_0498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_0498 PF00989 PAS fold Tmel_0500 PF01979 Amidohydrolase family Tmel_0501 PF04983 RNA polymerase Rpb1, domain 3 Tmel_0501 PF05000 RNA polymerase Rpb1, domain 4 Tmel_0501 PF04998 RNA polymerase Rpb1, domain 5 Tmel_0501 PF00623 RNA polymerase Rpb1, domain 2 Tmel_0501 PF04997 RNA polymerase Rpb1, domain 1 Tmel_0502 PF04560 RNA polymerase Rpb2, domain 7 Tmel_0502 PF04563 RNA polymerase beta subunit Tmel_0502 PF04561 RNA polymerase Rpb2, domain 2 Tmel_0502 PF04565 RNA polymerase Rpb2, domain 3 Tmel_0502 PF10385 RNA polymerase beta subunit external 1 domain Tmel_0502 PF00562 RNA polymerase Rpb2, domain 6 Tmel_0503 PF16320 Ribosomal protein L7/L12 dimerisation domain Tmel_0503 PF00542 Ribosomal protein L7/L12 C-terminal domain Tmel_0504 PF00466 Ribosomal protein L10 Tmel_0505 PF08889 WbqC-like protein family Tmel_0507 PF06463 Molybdenum Cofactor Synthesis C Tmel_0507 PF04055 Radical SAM superfamily Tmel_0508 PF00733 Asparagine synthase Tmel_0508 PF13537 Glutamine amidotransferase domain Tmel_0509 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tmel_0510 PF00551 Formyl transferase Tmel_0511 PF00483 Nucleotidyl transferase Tmel_0512 PF16363 GDP-mannose 4,6 dehydratase Tmel_0514 PF00669 Bacterial flagellin N-terminal helical region Tmel_0514 PF00700 Bacterial flagellin C-terminal helical region Tmel_0515 PF13181 Tetratricopeptide repeat Tmel_0515 PF00535 Glycosyl transferase family 2 Tmel_0516 PF01467 Cytidylyltransferase-like Tmel_0517 PF03796 DnaB-like helicase C terminal domain Tmel_0517 PF00772 DnaB-like helicase N terminal domain Tmel_0519 PF09820 Predicted AAA-ATPase Tmel_0519 PF08011 PD-(D/E)XK nuclease superfamily Tmel_0520 PF09820 Predicted AAA-ATPase Tmel_0520 PF08011 PD-(D/E)XK nuclease superfamily Tmel_0521 PF01042 Endoribonuclease L-PSP Tmel_0524 PF02142 MGS-like domain Tmel_0527 PF01336 OB-fold nucleic acid binding domain Tmel_0527 PF00152 tRNA synthetases class II (D, K and N) Tmel_0528 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Tmel_0531 PF02649 Type I GTP cyclohydrolase folE2 Tmel_0533 PF00862 Sucrose synthase Tmel_0533 PF00534 Glycosyl transferases group 1 Tmel_0534 PF00294 pfkB family carbohydrate kinase Tmel_0535 PF00712 DNA polymerase III beta subunit, N-terminal domain Tmel_0535 PF02767 DNA polymerase III beta subunit, central domain Tmel_0535 PF02768 DNA polymerase III beta subunit, C-terminal domain Tmel_0537 PF00005 ABC transporter Tmel_0539 PF00700 Bacterial flagellin C-terminal helical region Tmel_0539 PF00669 Bacterial flagellin N-terminal helical region Tmel_0542 PF02575 YbaB/EbfC DNA-binding family Tmel_0546 PF01476 LysM domain Tmel_0546 PF03734 L,D-transpeptidase catalytic domain Tmel_0547 PF00106 short chain dehydrogenase Tmel_0548 PF00128 Alpha amylase, catalytic domain Tmel_0548 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tmel_0550 PF02683 Cytochrome C biogenesis protein transmembrane region Tmel_0552 PF00462 Glutaredoxin Tmel_0553 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0554 PF13192 Thioredoxin domain Tmel_0554 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0555 PF00293 NUDIX domain Tmel_0557 PF02561 Flagellar protein FliS Tmel_0560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_0560 PF00005 ABC transporter Tmel_0561 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_0561 PF00005 ABC transporter Tmel_0562 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0562 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmel_0563 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0564 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmel_0566 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0567 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0568 PF00005 ABC transporter Tmel_0568 PF08402 TOBE domain Tmel_0569 PF13416 Bacterial extracellular solute-binding protein Tmel_0570 PF17284 Spermidine synthase tetramerisation domain Tmel_0571 PF02675 S-adenosylmethionine decarboxylase Tmel_0573 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmel_0573 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmel_0573 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmel_0573 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmel_0575 PF04474 Protein of unknown function (DUF554) Tmel_0577 PF02130 Uncharacterized protein family UPF0054 Tmel_0578 PF07697 7TM-HD extracellular Tmel_0578 PF07698 7TM receptor with intracellular HD hydrolase Tmel_0578 PF01966 HD domain Tmel_0579 PF02562 PhoH-like protein Tmel_0580 PF13181 Tetratricopeptide repeat Tmel_0582 PF02310 B12 binding domain Tmel_0583 PF00364 Biotin-requiring enzyme Tmel_0585 PF01039 Carboxyl transferase domain Tmel_0589 PF07517 SecA DEAD-like domain Tmel_0589 PF01043 SecA preprotein cross-linking domain Tmel_0589 PF07516 SecA Wing and Scaffold domain Tmel_0594 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0595 PF14785 Maltose transport system permease protein MalF P2 domain Tmel_0595 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0596 PF01547 Bacterial extracellular solute-binding protein Tmel_0597 PF00004 ATPase family associated with various cellular activities (AAA) Tmel_0597 PF02861 Clp amino terminal domain, pathogenicity island component Tmel_0597 PF10431 C-terminal, D2-small domain, of ClpB protein Tmel_0597 PF17871 AAA lid domain Tmel_0597 PF07724 AAA domain (Cdc48 subfamily) Tmel_0598 PF01979 Amidohydrolase family Tmel_0601 PF01458 Uncharacterized protein family (UPF0051) Tmel_0602 PF00005 ABC transporter Tmel_0603 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmel_0603 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmel_0604 PF03477 ATP cone domain Tmel_0604 PF13597 Anaerobic ribonucleoside-triphosphate reductase Tmel_0606 PF03477 ATP cone domain Tmel_0606 PF02867 Ribonucleotide reductase, barrel domain Tmel_0606 PF00317 Ribonucleotide reductase, all-alpha domain Tmel_0613 PF00565 Staphylococcal nuclease homologue Tmel_0616 PF04309 Glycerol-3-phosphate responsive antiterminator Tmel_0617 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmel_0617 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmel_0619 PF04324 BFD-like [2Fe-2S] binding domain Tmel_0619 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0620 PF04324 BFD-like [2Fe-2S] binding domain Tmel_0620 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0621 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0622 PF00669 Bacterial flagellin N-terminal helical region Tmel_0622 PF00700 Bacterial flagellin C-terminal helical region Tmel_0623 PF00293 NUDIX domain Tmel_0626 PF10431 C-terminal, D2-small domain, of ClpB protein Tmel_0626 PF06689 ClpX C4-type zinc finger Tmel_0626 PF07724 AAA domain (Cdc48 subfamily) Tmel_0627 PF00814 Glycoprotease family Tmel_0628 PF00571 CBS domain Tmel_0628 PF00478 IMP dehydrogenase / GMP reductase domain Tmel_0630 PF01145 SPFH domain / Band 7 family Tmel_0631 PF02915 Rubrerythrin Tmel_0632 PF02092 Glycyl-tRNA synthetase beta subunit Tmel_0632 PF05746 DALR anticodon binding domain Tmel_0633 PF02091 Glycyl-tRNA synthetase alpha subunit Tmel_0635 PF01098 Cell cycle protein Tmel_0636 PF01250 Ribosomal protein S6 Tmel_0637 PF00436 Single-strand binding protein family Tmel_0638 PF01084 Ribosomal protein S18 Tmel_0639 PF00471 Ribosomal protein L33 Tmel_0640 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tmel_0641 PF00467 KOW motif Tmel_0641 PF02357 Transcription termination factor nusG Tmel_0641 PF18298 NusG additional domain Tmel_0642 PF00298 Ribosomal protein L11, RNA binding domain Tmel_0642 PF03946 Ribosomal protein L11, N-terminal domain Tmel_0643 PF00687 Ribosomal protein L1p/L10e family Tmel_0645 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0645 PF03707 Bacterial signalling protein N terminal repeat Tmel_0645 PF00563 EAL domain Tmel_0646 PF00186 Dihydrofolate reductase Tmel_0648 PF00970 Oxidoreductase FAD-binding domain Tmel_0648 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmel_0648 PF00175 Oxidoreductase NAD-binding domain Tmel_0649 PF02508 Rnf-Nqr subunit, membrane protein Tmel_0650 PF02508 Rnf-Nqr subunit, membrane protein Tmel_0651 PF04205 FMN-binding domain Tmel_0652 PF03116 NQR2, RnfD, RnfE family Tmel_0653 PF00483 Nucleotidyl transferase Tmel_0653 PF01050 Mannose-6-phosphate isomerase Tmel_0654 PF00766 Electron transfer flavoprotein FAD-binding domain Tmel_0654 PF01012 Electron transfer flavoprotein domain Tmel_0655 PF01012 Electron transfer flavoprotein domain Tmel_0656 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Tmel_0656 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Tmel_0656 PF02770 Acyl-CoA dehydrogenase, middle domain Tmel_0663 PF08245 Mur ligase middle domain Tmel_0663 PF02875 Mur ligase family, glutamate ligase domain Tmel_0663 PF01225 Mur ligase family, catalytic domain Tmel_0665 PF00953 Glycosyl transferase family 4 Tmel_0666 PF00953 Glycosyl transferase family 4 Tmel_0668 PF02119 Flagellar P-ring protein Tmel_0669 PF02107 Flagellar L-ring protein Tmel_0671 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_0671 PF00986 DNA gyrase B subunit, carboxyl terminus Tmel_0671 PF01751 Toprim domain Tmel_0671 PF00204 DNA gyrase B Tmel_0673 PF01063 Amino-transferase class IV Tmel_0674 PF00919 Uncharacterized protein family UPF0004 Tmel_0674 PF04055 Radical SAM superfamily Tmel_0675 PF00478 IMP dehydrogenase / GMP reductase domain Tmel_0675 PF00571 CBS domain Tmel_0677 PF00664 ABC transporter transmembrane region Tmel_0677 PF00005 ABC transporter Tmel_0682 PF00403 Heavy-metal-associated domain Tmel_0686 PF00464 Serine hydroxymethyltransferase Tmel_0689 PF00933 Glycosyl hydrolase family 3 N terminal domain Tmel_0689 PF01915 Glycosyl hydrolase family 3 C-terminal domain Tmel_0690 PF13416 Bacterial extracellular solute-binding protein Tmel_0691 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0692 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0694 PF01979 Amidohydrolase family Tmel_0695 PF02277 Phosphoribosyltransferase Tmel_0697 PF02570 Precorrin-8X methylmutase Tmel_0698 PF01888 CbiD Tmel_0699 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmel_0702 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmel_0703 PF01890 Cobalamin synthesis G C-terminus Tmel_0703 PF11761 Cobalamin biosynthesis central region Tmel_0703 PF11760 Cobalamin synthesis G N-terminal Tmel_0704 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Tmel_0704 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmel_0705 PF02571 Precorrin-6x reductase CbiJ/CobK Tmel_0706 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Tmel_0706 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Tmel_0706 PF01488 Shikimate / quinate 5-dehydrogenase Tmel_0709 PF00490 Delta-aminolevulinic acid dehydratase Tmel_0710 PF14824 Sirohaem biosynthesis protein central Tmel_0710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmel_0710 PF10414 Sirohaem synthase dimerisation region Tmel_0711 PF00202 Aminotransferase class-III Tmel_0712 PF01891 Cobalt uptake substrate-specific transmembrane region Tmel_0713 PF02553 Cobalt transport protein component CbiN Tmel_0715 PF00005 ABC transporter Tmel_0717 PF00075 RNase H Tmel_0718 PF00117 Glutamine amidotransferase class-I Tmel_0718 PF00958 GMP synthase C terminal domain Tmel_0718 PF02540 NAD synthase Tmel_0720 PF04011 LemA family Tmel_0725 PF00291 Pyridoxal-phosphate dependent enzyme Tmel_0726 PF01384 Phosphate transporter family Tmel_0729 PF02607 B12 binding domain Tmel_0729 PF02574 Homocysteine S-methyltransferase Tmel_0729 PF02310 B12 binding domain Tmel_0729 PF00809 Pterin binding enzyme Tmel_0729 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tmel_0731 PF02219 Methylenetetrahydrofolate reductase Tmel_0734 PF00696 Amino acid kinase family Tmel_0734 PF00742 Homoserine dehydrogenase Tmel_0734 PF03447 Homoserine dehydrogenase, NAD binding domain Tmel_0736 PF00128 Alpha amylase, catalytic domain Tmel_0738 PF00578 AhpC/TSA family Tmel_0740 PF00005 ABC transporter Tmel_0742 PF08279 HTH domain Tmel_0742 PF00072 Response regulator receiver domain Tmel_0744 PF03129 Anticodon binding domain Tmel_0744 PF13393 Histidyl-tRNA synthetase Tmel_0747 PF00483 Nucleotidyl transferase Tmel_0749 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0750 PF03707 Bacterial signalling protein N terminal repeat Tmel_0750 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0750 PF00563 EAL domain Tmel_0751 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0752 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0753 PF13416 Bacterial extracellular solute-binding protein Tmel_0754 PF03063 Prismane/CO dehydrogenase family Tmel_0757 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmel_0757 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmel_0757 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmel_0757 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmel_0759 PF00578 AhpC/TSA family Tmel_0760 PF02567 Phenazine biosynthesis-like protein Tmel_0761 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tmel_0761 PF13378 Enolase C-terminal domain-like Tmel_0762 PF01470 Pyroglutamyl peptidase Tmel_0763 PF00356 Bacterial regulatory proteins, lacI family Tmel_0765 PF11975 Family 4 glycosyl hydrolase C-terminal domain Tmel_0765 PF02056 Family 4 glycosyl hydrolase Tmel_0766 PF01022 Bacterial regulatory protein, arsR family Tmel_0769 PF01119 DNA mismatch repair protein, C-terminal domain Tmel_0769 PF08676 MutL C terminal dimerisation domain Tmel_0770 PF00128 Alpha amylase, catalytic domain Tmel_0770 PF09178 Domain of unknown function (DUF1945) Tmel_0772 PF01966 HD domain Tmel_0772 PF11871 Domain of unknown function (DUF3391) Tmel_0773 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0774 PF00919 Uncharacterized protein family UPF0004 Tmel_0774 PF18693 TRAM domain Tmel_0774 PF04055 Radical SAM superfamily Tmel_0777 PF08281 Sigma-70, region 4 Tmel_0777 PF04542 Sigma-70 region 2 Tmel_0779 PF00580 UvrD/REP helicase N-terminal domain Tmel_0779 PF13361 UvrD-like helicase C-terminal domain Tmel_0782 PF00356 Bacterial regulatory proteins, lacI family Tmel_0783 PF18146 Damage-inducible protein CinA KH domain Tmel_0783 PF00994 Probable molybdopterin binding domain Tmel_0783 PF02464 Competence-damaged protein Tmel_0784 PF00117 Glutamine amidotransferase class-I Tmel_0784 PF06418 CTP synthase N-terminus Tmel_0785 PF02811 PHP domain Tmel_0786 PF00889 Elongation factor TS Tmel_0788 PF01865 Protein of unknown function DUF47 Tmel_0789 PF01384 Phosphate transporter family Tmel_0790 PF01464 Transglycosylase SLT domain Tmel_0790 PF00497 Bacterial extracellular solute-binding proteins, family 3 Tmel_0793 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0796 PF03600 Citrate transporter Tmel_0797 PF01926 50S ribosome-binding GTPase Tmel_0797 PF01018 GTP1/OBG Tmel_0798 PF06130 Phosphate propanoyltransferase Tmel_0803 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tmel_0803 PF02806 Alpha amylase, C-terminal all-beta domain Tmel_0803 PF00128 Alpha amylase, catalytic domain Tmel_0804 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tmel_0805 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tmel_0805 PF00361 Proton-conducting membrane transporter Tmel_0806 PF00365 Phosphofructokinase Tmel_0807 PF00465 Iron-containing alcohol dehydrogenase Tmel_0808 PF01926 50S ribosome-binding GTPase Tmel_0808 PF07650 KH domain Tmel_0809 PF03147 Ferredoxin-fold anticodon binding domain Tmel_0809 PF03483 B3/4 domain Tmel_0809 PF01588 Putative tRNA binding domain Tmel_0809 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tmel_0809 PF03484 tRNA synthetase B5 domain Tmel_0813 PF02660 Glycerol-3-phosphate acyltransferase Tmel_0815 PF02350 UDP-N-acetylglucosamine 2-epimerase Tmel_0819 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0820 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0821 PF02743 Cache domain Tmel_0821 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0821 PF00672 HAMP domain Tmel_0822 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0822 PF08448 PAS fold Tmel_0823 PF04286 Protein of unknown function (DUF445) Tmel_0824 PF01134 Glucose inhibited division protein A Tmel_0824 PF13932 GidA associated domain Tmel_0825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmel_0825 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_0826 PF03749 Sugar fermentation stimulation protein RE domain Tmel_0826 PF17746 SfsA N-terminal OB domain Tmel_0829 PF01022 Bacterial regulatory protein, arsR family Tmel_0830 PF01554 MatE Tmel_0831 PF12848 ABC transporter Tmel_0831 PF00005 ABC transporter Tmel_0831 PF16326 ABC transporter C-terminal domain Tmel_0834 PF10609 NUBPL iron-transfer P-loop NTPase Tmel_0836 PF01975 Survival protein SurE Tmel_0837 PF01327 Polypeptide deformylase Tmel_0838 PF00270 DEAD/DEAH box helicase Tmel_0838 PF00271 Helicase conserved C-terminal domain Tmel_0840 PF00005 ABC transporter Tmel_0843 PF00486 Transcriptional regulatory protein, C terminal Tmel_0843 PF00072 Response regulator receiver domain Tmel_0845 PF09285 Elongation factor P, C-terminal Tmel_0845 PF08207 Elongation factor P (EF-P) KOW-like domain Tmel_0845 PF01132 Elongation factor P (EF-P) OB domain Tmel_0847 PF01029 NusB family Tmel_0849 PF01312 FlhB HrpN YscU SpaS Family Tmel_0850 PF01311 Bacterial export proteins, family 1 Tmel_0851 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_0851 PF02743 Cache domain Tmel_0851 PF00672 HAMP domain Tmel_0852 PF01048 Phosphorylase superfamily Tmel_0853 PF00990 Diguanylate cyclase, GGDEF domain Tmel_0854 PF02277 Phosphoribosyltransferase Tmel_0855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Tmel_0857 PF02654 Cobalamin-5-phosphate synthase Tmel_0858 PF07685 CobB/CobQ-like glutamine amidotransferase domain Tmel_0859 PF03186 CobD/Cbib protein Tmel_0860 PF00155 Aminotransferase class I and II Tmel_0861 PF12557 Cob(I)alamin adenosyltransferase N terminal Tmel_0861 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tmel_0862 PF00082 Subtilase family Tmel_0866 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Tmel_0867 PF01479 S4 domain Tmel_0867 PF00849 RNA pseudouridylate synthase Tmel_0868 PF00809 Pterin binding enzyme Tmel_0869 PF12146 Serine aminopeptidase, S33 Tmel_0870 PF00266 Aminotransferase class-V Tmel_0871 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_0871 PF12804 MobA-like NTP transferase domain Tmel_0871 PF14602 Hexapeptide repeat of succinyl-transferase Tmel_0875 PF01139 tRNA-splicing ligase RtcB Tmel_0876 PF00005 ABC transporter Tmel_0877 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_0882 PF01594 AI-2E family transporter Tmel_0883 PF00710 Asparaginase, N-terminal Tmel_0883 PF17763 Glutaminase/Asparaginase C-terminal domain Tmel_0889 PF06470 SMC proteins Flexible Hinge Domain Tmel_0889 PF02463 RecF/RecN/SMC N terminal domain Tmel_0890 PF08245 Mur ligase middle domain Tmel_0890 PF02875 Mur ligase family, glutamate ligase domain Tmel_0890 PF01225 Mur ligase family, catalytic domain Tmel_0891 PF04101 Glycosyltransferase family 28 C-terminal domain Tmel_0891 PF03033 Glycosyltransferase family 28 N-terminal domain Tmel_0892 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmel_0892 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmel_0893 PF00881 Nitroreductase family Tmel_0904 PF07676 WD40-like Beta Propeller Repeat Tmel_0904 PF00326 Prolyl oligopeptidase family Tmel_0905 PF01113 Dihydrodipicolinate reductase, N-terminus Tmel_0907 PF00291 Pyridoxal-phosphate dependent enzyme Tmel_0908 PF16552 D-ornithine 4,5-aminomutase alpha-subunit Tmel_0909 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Tmel_0909 PF02310 B12 binding domain Tmel_0909 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Tmel_0910 PF01026 TatD related DNase Tmel_0911 PF01330 RuvA N terminal domain Tmel_0911 PF07499 RuvA, C-terminal domain Tmel_0915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_0915 PF18698 Histidine kinase sensor domain Tmel_0915 PF00672 HAMP domain Tmel_0915 PF00512 His Kinase A (phospho-acceptor) domain Tmel_0917 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmel_0917 PF01411 tRNA synthetases class II (A) Tmel_0917 PF02272 DHHA1 domain Tmel_0919 PF01479 S4 domain Tmel_0919 PF00849 RNA pseudouridylate synthase Tmel_0922 PF00224 Pyruvate kinase, barrel domain Tmel_0922 PF02887 Pyruvate kinase, alpha/beta domain Tmel_0923 PF05198 Translation initiation factor IF-3, N-terminal domain Tmel_0923 PF00707 Translation initiation factor IF-3, C-terminal domain Tmel_0924 PF01632 Ribosomal protein L35 Tmel_0925 PF00453 Ribosomal protein L20 Tmel_0926 PF00318 Ribosomal protein S2 Tmel_0927 PF02223 Thymidylate kinase Tmel_0928 PF01313 Bacterial export proteins, family 3 Tmel_0929 PF00813 FliP family Tmel_0931 PF00072 Response regulator receiver domain Tmel_0932 PF01584 CheW-like domain Tmel_0933 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_0933 PF02895 Signal transducing histidine kinase, homodimeric domain Tmel_0933 PF01584 CheW-like domain Tmel_0933 PF07194 P2 response regulator binding domain Tmel_0933 PF01627 Hpt domain Tmel_0935 PF01479 S4 domain Tmel_0935 PF01728 FtsJ-like methyltransferase Tmel_0937 PF01416 tRNA pseudouridine synthase Tmel_0941 PF17863 AAA lid domain Tmel_0941 PF07726 ATPase family associated with various cellular activities (AAA) Tmel_0943 PF01098 Cell cycle protein Tmel_0944 PF04055 Radical SAM superfamily Tmel_0944 PF06969 HemN C-terminal domain Tmel_0946 PF02934 GatB/GatE catalytic domain Tmel_0946 PF02637 GatB domain Tmel_0947 PF01425 Amidase Tmel_0948 PF00164 Ribosomal protein S12/S23 Tmel_0949 PF00177 Ribosomal protein S7p/S5e Tmel_0950 PF03144 Elongation factor Tu domain 2 Tmel_0950 PF00679 Elongation factor G C-terminus Tmel_0950 PF14492 Elongation Factor G, domain II Tmel_0950 PF03764 Elongation factor G, domain IV Tmel_0950 PF00009 Elongation factor Tu GTP binding domain Tmel_0951 PF03143 Elongation factor Tu C-terminal domain Tmel_0951 PF00009 Elongation factor Tu GTP binding domain Tmel_0951 PF03144 Elongation factor Tu domain 2 Tmel_0952 PF00338 Ribosomal protein S10p/S20e Tmel_0953 PF00297 Ribosomal protein L3 Tmel_0954 PF00573 Ribosomal protein L4/L1 family Tmel_0955 PF00276 Ribosomal protein L23 Tmel_0956 PF03947 Ribosomal Proteins L2, C-terminal domain Tmel_0956 PF00181 Ribosomal Proteins L2, RNA binding domain Tmel_0957 PF00203 Ribosomal protein S19 Tmel_0958 PF00237 Ribosomal protein L22p/L17e Tmel_0959 PF00189 Ribosomal protein S3, C-terminal domain Tmel_0959 PF07650 KH domain Tmel_0960 PF00252 Ribosomal protein L16p/L10e Tmel_0961 PF00831 Ribosomal L29 protein Tmel_0962 PF00366 Ribosomal protein S17 Tmel_0963 PF00238 Ribosomal protein L14p/L23e Tmel_0964 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tmel_0964 PF00467 KOW motif Tmel_0965 PF00673 ribosomal L5P family C-terminus Tmel_0965 PF00281 Ribosomal protein L5 Tmel_0966 PF00253 Ribosomal protein S14p/S29e Tmel_0967 PF00410 Ribosomal protein S8 Tmel_0968 PF00347 Ribosomal protein L6 Tmel_0969 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tmel_0970 PF03719 Ribosomal protein S5, C-terminal domain Tmel_0970 PF00333 Ribosomal protein S5, N-terminal domain Tmel_0971 PF00327 Ribosomal protein L30p/L7e Tmel_0972 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tmel_0973 PF00344 SecY translocase Tmel_0974 PF05191 Adenylate kinase, active site lid Tmel_0975 PF00557 Metallopeptidase family M24 Tmel_0976 PF01176 Translation initiation factor 1A / IF-1 Tmel_0977 PF00444 Ribosomal protein L36 Tmel_0978 PF00416 Ribosomal protein S13/S18 Tmel_0979 PF00411 Ribosomal protein S11 Tmel_0980 PF00163 Ribosomal protein S4/S9 N-terminal domain Tmel_0980 PF01479 S4 domain Tmel_0981 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tmel_0981 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tmel_0981 PF01000 RNA polymerase Rpb3/RpoA insert domain Tmel_0982 PF01196 Ribosomal protein L17 Tmel_0983 PF05697 Bacterial trigger factor protein (TF) Tmel_0983 PF05698 Bacterial trigger factor protein (TF) C-terminus Tmel_0984 PF00574 Clp protease Tmel_0985 PF01709 Transcriptional regulator Tmel_0987 PF01739 CheR methyltransferase, SAM binding domain Tmel_0987 PF03705 CheR methyltransferase, all-alpha domain Tmel_0988 PF01252 Signal peptidase (SPase) II Tmel_0989 PF00849 RNA pseudouridylate synthase Tmel_0989 PF01479 S4 domain Tmel_0990 PF03951 Glutamine synthetase, beta-Grasp domain Tmel_0990 PF00120 Glutamine synthetase, catalytic domain Tmel_0991 PF03537 Glycoside-hydrolase family GH114 Tmel_0994 PF00534 Glycosyl transferases group 1 Tmel_0998 PF01966 HD domain Tmel_0998 PF00072 Response regulator receiver domain Tmel_0999 PF17248 Family of unknown function (DUF5317) Tmel_1000 PF00814 Glycoprotease family Tmel_1001 PF00488 MutS domain V Tmel_1001 PF05190 MutS family domain IV Tmel_1001 PF01624 MutS domain I Tmel_1001 PF05192 MutS domain III Tmel_1001 PF05188 MutS domain II Tmel_1002 PF01966 HD domain Tmel_1002 PF00672 HAMP domain Tmel_1003 PF01871 AMMECR1 Tmel_1006 PF01171 PP-loop family Tmel_1007 PF03313 Serine dehydratase alpha chain Tmel_1009 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmel_1009 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmel_1012 PF00392 Bacterial regulatory proteins, gntR family Tmel_1013 PF04041 beta-1,4-mannooligosaccharide phosphorylase Tmel_1014 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1015 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1017 PF01547 Bacterial extracellular solute-binding protein Tmel_1021 PF07879 PHB/PHA accumulation regulator DNA-binding domain Tmel_1021 PF05233 PHB accumulation regulatory domain Tmel_1022 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_1024 PF01131 DNA topoisomerase Tmel_1024 PF01751 Toprim domain Tmel_1025 PF01966 HD domain Tmel_1025 PF01336 OB-fold nucleic acid binding domain Tmel_1026 PF00842 Alanine racemase, C-terminal domain Tmel_1026 PF01168 Alanine racemase, N-terminal domain Tmel_1027 PF00830 Ribosomal L28 family Tmel_1029 PF04539 Sigma-70 region 3 Tmel_1029 PF03979 Sigma-70 factor, region 1.1 Tmel_1029 PF04542 Sigma-70 region 2 Tmel_1029 PF04545 Sigma-70, region 4 Tmel_1029 PF00140 Sigma-70 factor, region 1.2 Tmel_1030 PF01807 CHC2 zinc finger Tmel_1030 PF08275 DNA primase catalytic core, N-terminal domain Tmel_1031 PF00380 Ribosomal protein S9/S16 Tmel_1032 PF00572 Ribosomal protein L13 Tmel_1033 PF12822 ECF transporter, substrate-specific component Tmel_1034 PF01016 Ribosomal L27 protein Tmel_1036 PF00829 Ribosomal prokaryotic L21 protein Tmel_1038 PF02075 Crossover junction endodeoxyribonuclease RuvC Tmel_1039 PF02811 PHP domain Tmel_1039 PF14579 Helix-hairpin-helix motif Tmel_1039 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmel_1039 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmel_1039 PF00929 Exonuclease Tmel_1040 PF04232 Stage V sporulation protein S (SpoVS) Tmel_1042 PF07136 Protein of unknown function (DUF1385) Tmel_1043 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tmel_1043 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tmel_1044 PF07687 Peptidase dimerisation domain Tmel_1044 PF01546 Peptidase family M20/M25/M40 Tmel_1045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tmel_1045 PF01409 tRNA synthetases class II core domain (F) Tmel_1046 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tmel_1046 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tmel_1047 PF06071 Protein of unknown function (DUF933) Tmel_1047 PF01926 50S ribosome-binding GTPase Tmel_1048 PF04025 Domain of unknown function (DUF370) Tmel_1049 PF04055 Radical SAM superfamily Tmel_1049 PF00919 Uncharacterized protein family UPF0004 Tmel_1050 PF00795 Carbon-nitrogen hydrolase Tmel_1051 PF02535 ZIP Zinc transporter Tmel_1052 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tmel_1052 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tmel_1053 PF13419 Haloacid dehalogenase-like hydrolase Tmel_1055 PF03060 Nitronate monooxygenase Tmel_1056 PF08011 PD-(D/E)XK nuclease superfamily Tmel_1056 PF09820 Predicted AAA-ATPase Tmel_1063 PF02397 Bacterial sugar transferase Tmel_1064 PF00534 Glycosyl transferases group 1 Tmel_1064 PF13439 Glycosyltransferase Family 4 Tmel_1067 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tmel_1067 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tmel_1067 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tmel_1069 PF00483 Nucleotidyl transferase Tmel_1070 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Tmel_1071 PF04321 RmlD substrate binding domain Tmel_1072 PF16363 GDP-mannose 4,6 dehydratase Tmel_1073 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase Tmel_1075 PF01467 Cytidylyltransferase-like Tmel_1081 PF16363 GDP-mannose 4,6 dehydratase Tmel_1088 PF04326 Putative DNA-binding domain Tmel_1103 PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system Tmel_1112 PF01209 ubiE/COQ5 methyltransferase family Tmel_1120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_1121 PF00149 Calcineurin-like phosphoesterase Tmel_1122 PF03775 Septum formation inhibitor MinC, C-terminal domain Tmel_1125 PF00460 Flagella basal body rod protein Tmel_1125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmel_1126 PF02049 Flagellar hook-basal body complex protein FliE Tmel_1127 PF00011 Hsp20/alpha crystallin family Tmel_1128 PF00012 Hsp70 protein Tmel_1129 PF01906 Putative heavy-metal-binding Tmel_1130 PF12146 Serine aminopeptidase, S33 Tmel_1130 PF13026 Protein of unknown function (DUF3887) Tmel_1132 PF00005 ABC transporter Tmel_1133 PF00392 Bacterial regulatory proteins, gntR family Tmel_1135 PF01144 Coenzyme A transferase Tmel_1136 PF01144 Coenzyme A transferase Tmel_1137 PF00245 Alkaline phosphatase Tmel_1139 PF00175 Oxidoreductase NAD-binding domain Tmel_1139 PF00970 Oxidoreductase FAD-binding domain Tmel_1139 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tmel_1140 PF00294 pfkB family carbohydrate kinase Tmel_1141 PF00480 ROK family Tmel_1145 PF00072 Response regulator receiver domain Tmel_1146 PF00072 Response regulator receiver domain Tmel_1146 PF01339 CheB methylesterase Tmel_1147 PF01339 CheB methylesterase Tmel_1147 PF00072 Response regulator receiver domain Tmel_1148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_1148 PF02895 Signal transducing histidine kinase, homodimeric domain Tmel_1148 PF07194 P2 response regulator binding domain Tmel_1148 PF01627 Hpt domain Tmel_1148 PF01584 CheW-like domain Tmel_1152 PF00873 AcrB/AcrD/AcrF family Tmel_1155 PF04055 Radical SAM superfamily Tmel_1155 PF18693 TRAM domain Tmel_1155 PF00919 Uncharacterized protein family UPF0004 Tmel_1156 PF01066 CDP-alcohol phosphatidyltransferase Tmel_1158 PF00154 recA bacterial DNA recombination protein Tmel_1159 PF02631 RecX family Tmel_1160 PF12072 Domain of unknown function (DUF3552) Tmel_1160 PF01966 HD domain Tmel_1160 PF00013 KH domain Tmel_1161 PF03459 TOBE domain Tmel_1161 PF00005 ABC transporter Tmel_1161 PF17912 MalK OB fold domain Tmel_1164 PF08362 YcdC-like protein, C-terminal region Tmel_1164 PF00440 Bacterial regulatory proteins, tetR family Tmel_1165 PF01197 Ribosomal protein L31 Tmel_1166 PF00575 S1 RNA binding domain Tmel_1168 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmel_1168 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmel_1168 PF00037 4Fe-4S binding domain Tmel_1170 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmel_1170 PF00037 4Fe-4S binding domain Tmel_1170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmel_1173 PF07837 Formiminotransferase domain, N-terminal subdomain Tmel_1173 PF02971 Formiminotransferase domain Tmel_1174 PF00459 Inositol monophosphatase family Tmel_1175 PF03717 Penicillin-binding Protein dimerisation domain Tmel_1175 PF00905 Penicillin binding protein transpeptidase domain Tmel_1176 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tmel_1178 PF01008 Initiation factor 2 subunit family Tmel_1180 PF09424 Yqey-like protein Tmel_1181 PF00850 Histone deacetylase domain Tmel_1182 PF02502 Ribose/Galactose Isomerase Tmel_1183 PF01740 STAS domain Tmel_1184 PF01726 LexA DNA binding domain Tmel_1184 PF00717 Peptidase S24-like Tmel_1186 PF00521 DNA gyrase/topoisomerase IV, subunit A Tmel_1186 PF03989 DNA gyrase C-terminal domain, beta-propeller Tmel_1187 PF08264 Anticodon-binding domain of tRNA Tmel_1187 PF09334 tRNA synthetases class I (M) Tmel_1187 PF01588 Putative tRNA binding domain Tmel_1188 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmel_1191 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_1191 PF00005 ABC transporter Tmel_1192 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_1192 PF00005 ABC transporter Tmel_1193 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Tmel_1193 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Tmel_1193 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmel_1193 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmel_1194 PF01966 HD domain Tmel_1195 PF01475 Ferric uptake regulator family Tmel_1196 PF00578 AhpC/TSA family Tmel_1196 PF10417 C-terminal domain of 1-Cys peroxiredoxin Tmel_1197 PF00301 Rubredoxin Tmel_1198 PF00753 Metallo-beta-lactamase superfamily Tmel_1198 PF00258 Flavodoxin Tmel_1199 PF00210 Ferritin-like domain Tmel_1201 PF06397 Desulfoferrodoxin, N-terminal domain Tmel_1201 PF01880 Desulfoferrodoxin Tmel_1204 PF01966 HD domain Tmel_1204 PF00672 HAMP domain Tmel_1206 PF00265 Thymidine kinase Tmel_1207 PF00149 Calcineurin-like phosphoesterase Tmel_1207 PF02872 5'-nucleotidase, C-terminal domain Tmel_1209 PF02629 CoA binding domain Tmel_1209 PF06971 Putative DNA-binding protein N-terminus Tmel_1210 PF01899 Na+/H+ ion antiporter subunit Tmel_1211 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tmel_1214 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tmel_1214 PF00361 Proton-conducting membrane transporter Tmel_1214 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tmel_1214 PF13244 Domain of unknown function (DUF4040) Tmel_1215 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tmel_1216 PF00361 Proton-conducting membrane transporter Tmel_1219 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tmel_1220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tmel_1221 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tmel_1222 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_1222 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tmel_1222 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmel_1224 PF00483 Nucleotidyl transferase Tmel_1224 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_1227 PF00753 Metallo-beta-lactamase superfamily Tmel_1229 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmel_1229 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmel_1230 PF06426 Serine acetyltransferase, N-terminal Tmel_1230 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_1231 PF00291 Pyridoxal-phosphate dependent enzyme Tmel_1232 PF00731 AIR carboxylase Tmel_1233 PF01259 SAICAR synthetase Tmel_1234 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tmel_1236 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tmel_1236 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus Tmel_1236 PF00586 AIR synthase related protein, N-terminal domain Tmel_1236 PF02769 AIR synthase related protein, C-terminal domain Tmel_1237 PF01293 Phosphoenolpyruvate carboxykinase Tmel_1239 PF04227 Indigoidine synthase A like protein Tmel_1240 PF12850 Calcineurin-like phosphoesterase superfamily domain Tmel_1241 PF01205 Uncharacterized protein family UPF0029 Tmel_1241 PF09186 Domain of unknown function (DUF1949) Tmel_1242 PF00155 Aminotransferase class I and II Tmel_1243 PF10397 Adenylosuccinate lyase C-terminus Tmel_1243 PF00206 Lyase Tmel_1244 PF01022 Bacterial regulatory protein, arsR family Tmel_1245 PF01545 Cation efflux family Tmel_1245 PF16916 Dimerisation domain of Zinc Transporter Tmel_1258 PF01242 6-pyruvoyl tetrahydropterin synthase Tmel_1259 PF00155 Aminotransferase class I and II Tmel_1263 PF00486 Transcriptional regulatory protein, C terminal Tmel_1263 PF00072 Response regulator receiver domain Tmel_1264 PF00121 Triosephosphate isomerase Tmel_1264 PF00162 Phosphoglycerate kinase Tmel_1265 PF00162 Phosphoglycerate kinase Tmel_1266 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tmel_1266 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tmel_1269 PF18269 T3SS EscN ATPase C-terminal domain Tmel_1269 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmel_1269 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmel_1271 PF00871 Acetokinase family Tmel_1272 PF01116 Fructose-bisphosphate aldolase class-II Tmel_1275 PF00091 Tubulin/FtsZ family, GTPase domain Tmel_1275 PF12327 FtsZ family, C-terminal domain Tmel_1276 PF00437 Type II/IV secretion system protein Tmel_1278 PF01765 Ribosome recycling factor Tmel_1279 PF01255 Putative undecaprenyl diphosphate synthase Tmel_1281 PF01411 tRNA synthetases class II (A) Tmel_1281 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmel_1281 PF02272 DHHA1 domain Tmel_1285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tmel_1286 PF02719 Polysaccharide biosynthesis protein Tmel_1289 PF00009 Elongation factor Tu GTP binding domain Tmel_1289 PF03764 Elongation factor G, domain IV Tmel_1289 PF14492 Elongation Factor G, domain II Tmel_1289 PF00679 Elongation factor G C-terminus Tmel_1292 PF13860 FlgD Ig-like domain Tmel_1292 PF03963 Flagellar hook capping protein - N-terminal region Tmel_1292 PF13861 FlgD Tudor-like domain Tmel_1293 PF07196 Flagellin hook IN motif Tmel_1293 PF00460 Flagella basal body rod protein Tmel_1293 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmel_1293 PF07559 Flagellar basal body protein FlaE Tmel_1294 PF06289 Flagellar and Swarming motility proteins Tmel_1295 PF01618 MotA/TolQ/ExbB proton channel family Tmel_1296 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tmel_1296 PF00691 OmpA family Tmel_1298 PF02154 Flagellar motor switch protein FliM Tmel_1298 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tmel_1299 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tmel_1299 PF04509 CheC-like family Tmel_1300 PF00209 Sodium:neurotransmitter symporter family Tmel_1302 PF04079 Segregation and condensation complex subunit ScpB Tmel_1303 PF02616 Segregation and condensation protein ScpA Tmel_1304 PF03448 MgtE intracellular N domain Tmel_1304 PF01769 Divalent cation transporter Tmel_1304 PF00571 CBS domain Tmel_1306 PF04127 DNA / pantothenate metabolism flavoprotein Tmel_1306 PF02441 Flavoprotein Tmel_1307 PF02548 Ketopantoate hydroxymethyltransferase Tmel_1310 PF00005 ABC transporter Tmel_1314 PF02677 Epoxyqueuosine reductase QueH Tmel_1315 PF02580 D-Tyr-tRNA(Tyr) deacylase Tmel_1316 PF02824 TGS domain Tmel_1316 PF04607 Region found in RelA / SpoT proteins Tmel_1316 PF13291 ACT domain Tmel_1319 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tmel_1319 PF01799 [2Fe-2S] binding domain Tmel_1319 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmel_1320 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmel_1320 PF01799 [2Fe-2S] binding domain Tmel_1323 PF00111 2Fe-2S iron-sulfur cluster binding domain Tmel_1323 PF01799 [2Fe-2S] binding domain Tmel_1324 PF00291 Pyridoxal-phosphate dependent enzyme Tmel_1327 PF03129 Anticodon binding domain Tmel_1327 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmel_1327 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmel_1327 PF02824 TGS domain Tmel_1328 PF00072 Response regulator receiver domain Tmel_1329 PF01957 NfeD-like C-terminal, partner-binding Tmel_1329 PF01972 Serine dehydrogenase proteinase Tmel_1330 PF01145 SPFH domain / Band 7 family Tmel_1333 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tmel_1333 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tmel_1334 PF03808 Glycosyl transferase WecB/TagA/CpsF family Tmel_1335 PF02527 rRNA small subunit methyltransferase G Tmel_1336 PF01926 50S ribosome-binding GTPase Tmel_1336 PF12631 MnmE helical domain Tmel_1336 PF10396 GTP-binding protein TrmE N-terminus Tmel_1339 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tmel_1339 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tmel_1339 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tmel_1344 PF00990 Diguanylate cyclase, GGDEF domain Tmel_1345 PF03009 Glycerophosphoryl diester phosphodiesterase family Tmel_1346 PF00155 Aminotransferase class I and II Tmel_1347 PF08240 Alcohol dehydrogenase GroES-like domain Tmel_1347 PF00107 Zinc-binding dehydrogenase Tmel_1353 PF01554 MatE Tmel_1355 PF00005 ABC transporter Tmel_1360 PF10415 Fumarase C C-terminus Tmel_1360 PF00206 Lyase Tmel_1361 PF01926 50S ribosome-binding GTPase Tmel_1361 PF07650 KH domain Tmel_1363 PF00348 Polyprenyl synthetase Tmel_1365 PF00485 Phosphoribulokinase / Uridine kinase family Tmel_1366 PF01966 HD domain Tmel_1367 PF03309 Type III pantothenate kinase Tmel_1368 PF04055 Radical SAM superfamily Tmel_1368 PF02310 B12 binding domain Tmel_1372 PF01177 Asp/Glu/Hydantoin racemase Tmel_1373 PF03668 P-loop ATPase protein family Tmel_1374 PF01933 Uncharacterised protein family UPF0052 Tmel_1375 PF14527 WhiA LAGLIDADG-like domain Tmel_1375 PF02650 WhiA C-terminal HTH domain Tmel_1376 PF03477 ATP cone domain Tmel_1377 PF03449 Transcription elongation factor, N-terminal Tmel_1377 PF01272 Transcription elongation factor, GreA/GreB, C-term Tmel_1378 PF01336 OB-fold nucleic acid binding domain Tmel_1378 PF00152 tRNA synthetases class II (D, K and N) Tmel_1380 PF01479 S4 domain Tmel_1382 PF00005 ABC transporter Tmel_1382 PF00664 ABC transporter transmembrane region Tmel_1384 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_1384 PF00005 ABC transporter Tmel_1385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_1385 PF00005 ABC transporter Tmel_1386 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmel_1387 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1388 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmel_1388 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1393 PF07497 Rho termination factor, RNA-binding domain Tmel_1393 PF07498 Rho termination factor, N-terminal domain Tmel_1393 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmel_1395 PF03462 PCRF domain Tmel_1395 PF00472 RF-1 domain Tmel_1396 PF00437 Type II/IV secretion system protein Tmel_1397 PF12169 DNA polymerase III subunits gamma and tau domain III Tmel_1401 PF01734 Patatin-like phospholipase Tmel_1402 PF01261 Xylose isomerase-like TIM barrel Tmel_1404 PF02540 NAD synthase Tmel_1404 PF00795 Carbon-nitrogen hydrolase Tmel_1408 PF01790 Prolipoprotein diacylglyceryl transferase Tmel_1409 PF01676 Metalloenzyme superfamily Tmel_1409 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tmel_1411 PF01475 Ferric uptake regulator family Tmel_1412 PF13184 NusA-like KH domain Tmel_1412 PF00575 S1 RNA binding domain Tmel_1412 PF08529 NusA N-terminal domain Tmel_1413 PF02576 RimP N-terminal domain Tmel_1413 PF17384 RimP C-terminal SH3 domain Tmel_1416 PF01702 Queuine tRNA-ribosyltransferase Tmel_1418 PF00156 Phosphoribosyl transferase domain Tmel_1419 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmel_1419 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmel_1419 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmel_1419 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmel_1420 PF01883 Iron-sulfur cluster assembly protein Tmel_1421 PF05175 Methyltransferase small domain Tmel_1421 PF17827 PrmC N-terminal domain Tmel_1422 PF03948 Ribosomal protein L9, C-terminal domain Tmel_1422 PF01281 Ribosomal protein L9, N-terminal domain Tmel_1423 PF12706 Beta-lactamase superfamily domain Tmel_1425 PF12627 Probable RNA and SrmB- binding site of polymerase A Tmel_1425 PF01966 HD domain Tmel_1425 PF01743 Poly A polymerase head domain Tmel_1431 PF04542 Sigma-70 region 2 Tmel_1431 PF04539 Sigma-70 region 3 Tmel_1431 PF04545 Sigma-70, region 4 Tmel_1432 PF03975 CheD chemotactic sensory transduction Tmel_1433 PF04509 CheC-like family Tmel_1436 PF10609 NUBPL iron-transfer P-loop NTPase Tmel_1437 PF00448 SRP54-type protein, GTPase domain Tmel_1438 PF00771 FHIPEP family Tmel_1472 PF03837 RecT family Tmel_1473 PF09588 YqaJ-like viral recombinase domain Tmel_1479 PF00717 Peptidase S24-like Tmel_1479 PF01726 LexA DNA binding domain Tmel_1480 PF01555 DNA methylase Tmel_1481 PF18643 BsaWI restriction endonuclease type 2 Tmel_1487 PF01925 Sulfite exporter TauE/SafE Tmel_1490 PF04468 PSP1 C-terminal conserved region Tmel_1491 PF11146 Protein of unknown function (DUF2905) Tmel_1492 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tmel_1493 PF05362 Lon protease (S16) C-terminal proteolytic domain Tmel_1493 PF00004 ATPase family associated with various cellular activities (AAA) Tmel_1493 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tmel_1494 PF01926 50S ribosome-binding GTPase Tmel_1495 PF03485 Arginyl tRNA synthetase N terminal domain Tmel_1495 PF05746 DALR anticodon binding domain Tmel_1495 PF00750 tRNA synthetases class I (R) Tmel_1496 PF00672 HAMP domain Tmel_1496 PF00989 PAS fold Tmel_1496 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_1496 PF00512 His Kinase A (phospho-acceptor) domain Tmel_1496 PF18698 Histidine kinase sensor domain Tmel_1497 PF08668 HDOD domain Tmel_1498 PF02033 Ribosome-binding factor A Tmel_1500 PF07196 Flagellin hook IN motif Tmel_1500 PF02465 Flagellar hook-associated protein 2 N-terminus Tmel_1500 PF07195 Flagellar hook-associated protein 2 C-terminus Tmel_1503 PF04055 Radical SAM superfamily Tmel_1505 PF16745 RsgA N-terminal domain Tmel_1505 PF03193 RsgA GTPase Tmel_1506 PF11842 Domain of unknown function (DUF3362) Tmel_1506 PF08497 Radical SAM N-terminal Tmel_1506 PF04055 Radical SAM superfamily Tmel_1507 PF03471 Transporter associated domain Tmel_1507 PF00571 CBS domain Tmel_1508 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tmel_1509 PF02463 RecF/RecN/SMC N terminal domain Tmel_1511 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tmel_1511 PF00533 BRCA1 C Terminus (BRCT) domain Tmel_1511 PF01653 NAD-dependent DNA ligase adenylation domain Tmel_1511 PF03120 NAD-dependent DNA ligase OB-fold domain Tmel_1511 PF12826 Helix-hairpin-helix motif Tmel_1513 PF08206 Ribonuclease B OB domain Tmel_1513 PF17876 Cold shock domain Tmel_1513 PF00773 RNB domain Tmel_1513 PF00575 S1 RNA binding domain Tmel_1514 PF01029 NusB family Tmel_1514 PF01189 16S rRNA methyltransferase RsmB/F Tmel_1515 PF04298 Putative neutral zinc metallopeptidase Tmel_1516 PF00486 Transcriptional regulatory protein, C terminal Tmel_1516 PF00072 Response regulator receiver domain Tmel_1517 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tmel_1517 PF00588 SpoU rRNA Methylase family Tmel_1518 PF03819 MazG nucleotide pyrophosphohydrolase domain Tmel_1519 PF01594 AI-2E family transporter Tmel_1524 PF14579 Helix-hairpin-helix motif Tmel_1524 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmel_1524 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmel_1525 PF00834 Ribulose-phosphate 3 epimerase family Tmel_1526 PF01048 Phosphorylase superfamily Tmel_1527 PF01368 DHH family Tmel_1527 PF02272 DHHA1 domain Tmel_1528 PF00990 Diguanylate cyclase, GGDEF domain Tmel_1529 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tmel_1529 PF01565 FAD binding domain Tmel_1530 PF02127 Aminopeptidase I zinc metalloprotease (M18) Tmel_1535 PF01238 Phosphomannose isomerase type I Tmel_1537 PF00550 Phosphopantetheine attachment site Tmel_1538 PF17864 RuvB AAA lid domain Tmel_1538 PF05491 RuvB C-terminal winged helix domain Tmel_1538 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tmel_1539 PF01168 Alanine racemase, N-terminal domain Tmel_1541 PF01513 ATP-NAD kinase Tmel_1542 PF01895 PhoU domain Tmel_1544 PF05958 tRNA (Uracil-5-)-methyltransferase Tmel_1545 PF01808 AICARFT/IMPCHase bienzyme Tmel_1545 PF02142 MGS-like domain Tmel_1549 PF00472 RF-1 domain Tmel_1549 PF03462 PCRF domain Tmel_1550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tmel_1555 PF00448 SRP54-type protein, GTPase domain Tmel_1555 PF02881 SRP54-type protein, helical bundle domain Tmel_1557 PF06725 3D domain Tmel_1560 PF11734 TilS substrate C-terminal domain Tmel_1560 PF00156 Phosphoribosyl transferase domain Tmel_1560 PF01171 PP-loop family Tmel_1561 PF03816 Cell envelope-related transcriptional attenuator domain Tmel_1562 PF04493 Endonuclease V Tmel_1565 PF04055 Radical SAM superfamily Tmel_1565 PF16199 Radical_SAM C-terminal domain Tmel_1566 PF01979 Amidohydrolase family Tmel_1568 PF08245 Mur ligase middle domain Tmel_1568 PF02875 Mur ligase family, glutamate ligase domain Tmel_1569 PF08264 Anticodon-binding domain of tRNA Tmel_1569 PF10458 Valyl tRNA synthetase tRNA binding arm Tmel_1569 PF00133 tRNA synthetases class I (I, L, M and V) Tmel_1571 PF13375 RnfC Barrel sandwich hybrid domain Tmel_1571 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmel_1571 PF13237 4Fe-4S dicluster domain Tmel_1571 PF10531 SLBB domain Tmel_1572 PF03116 NQR2, RnfD, RnfE family Tmel_1574 PF02508 Rnf-Nqr subunit, membrane protein Tmel_1575 PF02508 Rnf-Nqr subunit, membrane protein Tmel_1576 PF03600 Citrate transporter Tmel_1577 PF01699 Sodium/calcium exchanger protein Tmel_1578 PF00478 IMP dehydrogenase / GMP reductase domain Tmel_1578 PF00571 CBS domain Tmel_1579 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_1579 PF00672 HAMP domain Tmel_1579 PF17200 Single Cache domain 2 Tmel_1580 PF00128 Alpha amylase, catalytic domain Tmel_1581 PF12697 Alpha/beta hydrolase family Tmel_1581 PF08241 Methyltransferase domain Tmel_1582 PF03447 Homoserine dehydrogenase, NAD binding domain Tmel_1582 PF01958 Domain of unknown function DUF108 Tmel_1583 PF02445 Quinolinate synthetase A protein Tmel_1584 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Tmel_1584 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tmel_1585 PF00109 Beta-ketoacyl synthase, N-terminal domain Tmel_1585 PF02801 Beta-ketoacyl synthase, C-terminal domain Tmel_1586 PF07977 FabA-like domain Tmel_1587 PF03060 Nitronate monooxygenase Tmel_1588 PF02632 BioY family Tmel_1589 PF00698 Acyl transferase domain Tmel_1592 PF01964 Radical SAM ThiC family Tmel_1594 PF10120 Thiamine-phosphate synthase Tmel_1594 PF08543 Phosphomethylpyrimidine kinase Tmel_1595 PF00365 Phosphofructokinase Tmel_1596 PF07969 Amidohydrolase family Tmel_1596 PF07969 Amidohydrolase family Tmel_1597 PF04055 Radical SAM superfamily Tmel_1597 PF06968 Biotin and Thiamin Synthesis associated domain Tmel_1601 PF02256 Iron hydrogenase small subunit Tmel_1601 PF00037 4Fe-4S binding domain Tmel_1601 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tmel_1601 PF02906 Iron only hydrogenase large subunit, C-terminal domain Tmel_1604 PF14622 Ribonuclease-III-like Tmel_1604 PF00035 Double-stranded RNA binding motif Tmel_1605 PF02540 NAD synthase Tmel_1605 PF00795 Carbon-nitrogen hydrolase Tmel_1606 PF08279 HTH domain Tmel_1606 PF03099 Biotin/lipoate A/B protein ligase family Tmel_1606 PF02237 Biotin protein ligase C terminal domain Tmel_1607 PF03023 Lipid II flippase MurJ Tmel_1608 PF04060 Putative Fe-S cluster Tmel_1609 PF02481 DNA recombination-mediator protein A Tmel_1610 PF02569 Pantoate-beta-alanine ligase Tmel_1611 PF16338 Domain of unknown function (DUF4968) Tmel_1611 PF17137 Domain of unknown function (DUF5110) Tmel_1611 PF13802 Galactose mutarotase-like Tmel_1611 PF01055 Glycosyl hydrolases family 31 Tmel_1612 PF00575 S1 RNA binding domain Tmel_1612 PF03725 3' exoribonuclease family, domain 2 Tmel_1612 PF00013 KH domain Tmel_1612 PF01138 3' exoribonuclease family, domain 1 Tmel_1612 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tmel_1613 PF00675 Insulinase (Peptidase family M16) Tmel_1613 PF05193 Peptidase M16 inactive domain Tmel_1614 PF00072 Response regulator receiver domain Tmel_1615 PF07724 AAA domain (Cdc48 subfamily) Tmel_1615 PF10431 C-terminal, D2-small domain, of ClpB protein Tmel_1615 PF00004 ATPase family associated with various cellular activities (AAA) Tmel_1616 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1618 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1619 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tmel_1620 PF00152 tRNA synthetases class II (D, K and N) Tmel_1620 PF01336 OB-fold nucleic acid binding domain Tmel_1620 PF02938 GAD domain Tmel_1621 PF01740 STAS domain Tmel_1622 PF02224 Cytidylate kinase Tmel_1623 PF02401 LytB protein Tmel_1623 PF00575 S1 RNA binding domain Tmel_1624 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tmel_1624 PF01926 50S ribosome-binding GTPase Tmel_1627 PF01966 HD domain Tmel_1627 PF00072 Response regulator receiver domain Tmel_1628 PF00468 Ribosomal protein L34 Tmel_1629 PF00825 Ribonuclease P Tmel_1630 PF01809 Putative membrane protein insertion efficiency factor Tmel_1631 PF02096 60Kd inner membrane protein Tmel_1632 PF14804 Jag N-terminus Tmel_1632 PF01424 R3H domain Tmel_1634 PF06826 Predicted Permease Membrane Region Tmel_1634 PF02080 TrkA-C domain Tmel_1635 PF03951 Glutamine synthetase, beta-Grasp domain Tmel_1635 PF00120 Glutamine synthetase, catalytic domain Tmel_1636 PF00990 Diguanylate cyclase, GGDEF domain Tmel_1638 PF00232 Glycosyl hydrolase family 1 Tmel_1648 PF00664 ABC transporter transmembrane region Tmel_1648 PF00005 ABC transporter Tmel_1650 PF09827 CRISPR associated protein Cas2 Tmel_1651 PF01867 CRISPR associated protein Cas1 Tmel_1652 PF09827 CRISPR associated protein Cas2 Tmel_1661 PF09701 CRISPR-associated protein (Cas_Cmr5) Tmel_1670 PF18211 Csm1 subunit domain B Tmel_1672 PF03787 RAMP superfamily Tmel_1674 PF03787 RAMP superfamily Tmel_1686 PF12344 Ultra-violet resistance protein B Tmel_1686 PF02151 UvrB/uvrC motif Tmel_1686 PF17757 UvrB interaction domain Tmel_1686 PF00271 Helicase conserved C-terminal domain Tmel_1686 PF04851 Type III restriction enzyme, res subunit Tmel_1688 PF02463 RecF/RecN/SMC N terminal domain Tmel_1691 PF01555 DNA methylase Tmel_1695 PF01934 Protein of unknown function DUF86 Tmel_1699 PF03600 Citrate transporter Tmel_1701 PF00534 Glycosyl transferases group 1 Tmel_1702 PF00005 ABC transporter Tmel_1702 PF17912 MalK OB fold domain Tmel_1702 PF03459 TOBE domain Tmel_1703 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1704 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1708 PF00465 Iron-containing alcohol dehydrogenase Tmel_1714 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1715 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1716 PF17912 MalK OB fold domain Tmel_1716 PF03459 TOBE domain Tmel_1716 PF00005 ABC transporter Tmel_1717 PF00534 Glycosyl transferases group 1 Tmel_1722 PF01925 Sulfite exporter TauE/SafE Tmel_1723 PF01546 Peptidase family M20/M25/M40 Tmel_1726 PF00905 Penicillin binding protein transpeptidase domain Tmel_1726 PF03717 Penicillin-binding Protein dimerisation domain Tmel_1726 PF03793 PASTA domain Tmel_1727 PF01795 MraW methylase family Tmel_1728 PF01979 Amidohydrolase family Tmel_1729 PF00291 Pyridoxal-phosphate dependent enzyme Tmel_1730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Tmel_1730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Tmel_1731 PF01979 Amidohydrolase family Tmel_1731 PF13382 Adenine deaminase C-terminal domain Tmel_1732 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_1732 PF00005 ABC transporter Tmel_1733 PF00005 ABC transporter Tmel_1733 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmel_1735 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1736 PF08459 UvrC Helix-hairpin-helix N-terminal Tmel_1736 PF02151 UvrB/uvrC motif Tmel_1736 PF01541 GIY-YIG catalytic domain Tmel_1738 PF01597 Glycine cleavage H-protein Tmel_1739 PF07664 Ferrous iron transport protein B C terminus Tmel_1739 PF17910 FeoB cytosolic helical domain Tmel_1739 PF02421 Ferrous iron transport protein B Tmel_1739 PF04023 FeoA domain Tmel_1739 PF07670 Nucleoside recognition Tmel_1741 PF10531 SLBB domain Tmel_1742 PF01875 Memo-like protein Tmel_1743 PF03958 Bacterial type II/III secretion system short domain Tmel_1743 PF00263 Bacterial type II and III secretion system protein Tmel_1749 PF00482 Type II secretion system (T2SS), protein F Tmel_1750 PF00005 ABC transporter Tmel_1751 PF05175 Methyltransferase small domain Tmel_1755 PF01649 Ribosomal protein S20 Tmel_1756 PF02772 S-adenosylmethionine synthetase, central domain Tmel_1756 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tmel_1756 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tmel_1759 PF16360 GTP-binding GTPase Middle Region Tmel_1759 PF13167 GTP-binding GTPase N-terminal Tmel_1759 PF01926 50S ribosome-binding GTPase Tmel_1760 PF17209 Hfq protein Tmel_1763 PF00485 Phosphoribulokinase / Uridine kinase family Tmel_1764 PF10150 Ribonuclease E/G family Tmel_1764 PF00575 S1 RNA binding domain Tmel_1765 PF05221 S-adenosyl-L-homocysteine hydrolase Tmel_1765 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tmel_1767 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmel_1770 PF00072 Response regulator receiver domain Tmel_1770 PF01339 CheB methylesterase Tmel_1771 PF00395 S-layer homology domain Tmel_1776 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_1777 PF00221 Aromatic amino acid lyase Tmel_1778 PF01923 Cobalamin adenosyltransferase Tmel_1785 PF05343 M42 glutamyl aminopeptidase Tmel_1790 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tmel_1790 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tmel_1791 PF02390 Putative methyltransferase Tmel_1793 PF01256 Carbohydrate kinase Tmel_1793 PF03853 YjeF-related protein N-terminus Tmel_1794 PF01464 Transglycosylase SLT domain Tmel_1794 PF14718 Soluble lytic murein transglycosylase L domain Tmel_1795 PF06750 Bacterial Peptidase A24 N-terminal domain Tmel_1795 PF01478 Type IV leader peptidase family Tmel_1797 PF17820 PDZ domain Tmel_1797 PF13180 PDZ domain Tmel_1798 PF00343 Carbohydrate phosphorylase Tmel_1799 PF10502 Signal peptidase, peptidase S26 Tmel_1800 PF01245 Ribosomal protein L19 Tmel_1801 PF09936 SAM-dependent RNA methyltransferase Tmel_1802 PF01746 tRNA (Guanine-1)-methyltransferase Tmel_1803 PF05239 PRC-barrel domain Tmel_1803 PF01782 RimM N-terminal domain Tmel_1805 PF00886 Ribosomal protein S16 Tmel_1806 PF02978 Signal peptide binding domain Tmel_1806 PF02881 SRP54-type protein, helical bundle domain Tmel_1806 PF00448 SRP54-type protein, GTPase domain Tmel_1807 PF01547 Bacterial extracellular solute-binding protein Tmel_1808 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1814 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmel_1814 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmel_1816 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_1817 PF01966 HD domain Tmel_1818 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1819 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1820 PF01547 Bacterial extracellular solute-binding protein Tmel_1821 PF00534 Glycosyl transferases group 1 Tmel_1823 PF16736 Single Cache-like Tmel_1823 PF00989 PAS fold Tmel_1823 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_1823 PF00512 His Kinase A (phospho-acceptor) domain Tmel_1824 PF00486 Transcriptional regulatory protein, C terminal Tmel_1824 PF00072 Response regulator receiver domain Tmel_1825 PF01895 PhoU domain Tmel_1826 PF00005 ABC transporter Tmel_1827 PF00528 Binding-protein-dependent transport system inner membrane component Tmel_1829 PF12849 PBP superfamily domain Tmel_1830 PF00171 Aldehyde dehydrogenase family Tmel_1831 PF13302 Acetyltransferase (GNAT) domain Tmel_1832 PF01047 MarR family Tmel_1834 PF00294 pfkB family carbohydrate kinase Tmel_1836 PF02361 Cobalt transport protein Tmel_1837 PF03030 Inorganic H+ pyrophosphatase Tmel_1838 PF00072 Response regulator receiver domain Tmel_1838 PF00486 Transcriptional regulatory protein, C terminal Tmel_1839 PF00512 His Kinase A (phospho-acceptor) domain Tmel_1839 PF00672 HAMP domain Tmel_1839 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmel_1839 PF13426 PAS domain Tmel_1840 PF00591 Glycosyl transferase family, a/b domain Tmel_1840 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tmel_1840 PF02885 Glycosyl transferase family, helical bundle domain Tmel_1842 PF00156 Phosphoribosyl transferase domain Tmel_1843 PF00342 Phosphoglucose isomerase Tmel_1845 PF01121 Dephospho-CoA kinase Tmel_1846 PF00990 Diguanylate cyclase, GGDEF domain Tmel_1846 PF17155 Gammaproteobacterial periplasmic sensor domain Tmel_1847 PF02151 UvrB/uvrC motif Tmel_1847 PF04851 Type III restriction enzyme, res subunit Tmel_1847 PF00271 Helicase conserved C-terminal domain Tmel_1847 PF12344 Ultra-violet resistance protein B Tmel_1847 PF17757 UvrB interaction domain Tmel_1849 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmel_1854 PF05636 HIGH Nucleotidyl Transferase Tmel_1855 PF00270 DEAD/DEAH box helicase Tmel_1855 PF17757 UvrB interaction domain Tmel_1855 PF03461 TRCF domain Tmel_1855 PF02559 CarD-like/TRCF domain Tmel_1855 PF00271 Helicase conserved C-terminal domain Tmel_1857 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tmel_1857 PF10635 DisA bacterial checkpoint controller linker region Tmel_1857 PF00633 Helix-hairpin-helix motif Tmel_1858 PF01174 SNO glutamine amidotransferase family Tmel_1859 PF01680 SOR/SNZ family Tmel_1861 PF00596 Class II Aldolase and Adducin N-terminal domain Tmel_1863 PF02152 Dihydroneopterin aldolase Tmel_1863 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tmel_1864 PF00364 Biotin-requiring enzyme Tmel_1864 PF02436 Conserved carboxylase domain Tmel_1864 PF00682 HMGL-like Tmel_1865 PF04760 Translation initiation factor IF-2, N-terminal region Tmel_1865 PF11987 Translation-initiation factor 2 Tmel_1865 PF00009 Elongation factor Tu GTP binding domain Tmel_1867 PF17202 Single cache domain 3 Tmel_1867 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmel_1867 PF00672 HAMP domain Tmel_1870 PF00549 CoA-ligase Tmel_1870 PF08442 ATP-grasp domain Tmel_1871 PF02629 CoA binding domain Tmel_1871 PF00549 CoA-ligase Tmel_1872 PF02080 TrkA-C domain Tmel_1872 PF06826 Predicted Permease Membrane Region Tmel_1873 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tmel_1873 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tmel_1874 PF01678 Diaminopimelate epimerase Tmel_1875 PF00701 Dihydrodipicolinate synthetase family Tmel_1876 PF05173 Dihydrodipicolinate reductase, C-terminus Tmel_1876 PF01113 Dihydrodipicolinate reductase, N-terminus Tmel_1877 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Tmel_1877 PF00132 Bacterial transferase hexapeptide (six repeats) Tmel_1878 PF13840 ACT domain Tmel_1878 PF00696 Amino acid kinase family Tmel_1879 PF00202 Aminotransferase class-III Tmel_1881 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tmel_1882 PF00795 Carbon-nitrogen hydrolase Tmel_1885 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tmel_1885 PF01571 Aminomethyltransferase folate-binding domain Tmel_1886 PF02347 Glycine cleavage system P-protein Tmel_1887 PF02347 Glycine cleavage system P-protein Tmel_1888 PF00465 Iron-containing alcohol dehydrogenase Tmel_1889 PF10672 S-adenosylmethionine-dependent methyltransferase Tmel_1889 PF17785 PUA-like domain Tmel_1891 PF00293 NUDIX domain Tmel_1892 PF07687 Peptidase dimerisation domain Tmel_1892 PF01546 Peptidase family M20/M25/M40 Tmel_1893 PF17391 Urocanase N-terminal domain Tmel_1893 PF17392 Urocanase C-terminal domain Tmel_1893 PF01175 Urocanase Rossmann-like domain Tmel_1896 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmel_1896 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmel_1896 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmel_1898 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Tmel_1899 PF09115 DNA polymerase III, delta subunit, C terminal Tmel_1900 PF00005 ABC transporter Tmel_1901 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase Tmel_1902 PF00365 Phosphofructokinase Tmel_1903 PF03030 Inorganic H+ pyrophosphatase Tmel_1904 PF02355 Protein export membrane protein Tmel_1904 PF07549 SecD/SecF GG Motif Tmel_1905 PF07549 SecD/SecF GG Motif Tmel_1905 PF02355 Protein export membrane protein Tmel_1906 PF02699 Preprotein translocase subunit Tmel_1907 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tmel_1907 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tmel_1909 PF02511 Thymidylate synthase complementing protein Tmel_1910 PF01351 Ribonuclease HII Tmel_1913 PF02146 Sir2 family Tmel_1916 PF02601 Exonuclease VII, large subunit Tmel_1916 PF13742 OB-fold nucleic acid binding domain Tmel_1917 PF01367 5'-3' exonuclease, C-terminal SAM fold Tmel_1917 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tmel_1917 PF00476 DNA polymerase family A Tmel_1919 PF02491 SHS2 domain inserted in FTSA Tmel_1920 PF01713 Smr domain Tmel_1920 PF00488 MutS domain V Tmel_1922 PF01384 Phosphate transporter family Tmel_1925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tmel_1926 PF00072 Response regulator receiver domain Tmel_1926 PF02954 Bacterial regulatory protein, Fis family Tmel_1926 PF00158 Sigma-54 interaction domain Tmel_1927 PF00696 Amino acid kinase family Tmel_1928 PF01515 Phosphate acetyl/butaryl transferase