locus-tag	class	description
BG95_00020	COG0514	ATP-dependent DNA helicase (RecQ)
BG95_00025	COG0758	DNA mediated transformation
BG95_00030	COG1752	Esterase of the alpha-beta hydrolase superfamily
BG95_00060	COG0768	penicillin binding
BG95_00070	COG0275	rRNA processing
BG95_00090	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BG95_00095	COG4608	Belongs to the ABC transporter superfamily
BG95_00110	COG0601	transmembrane transport
BG95_00115	COG0322	excinuclease ABC activity
BG95_00125	COG0509	glycine decarboxylation via glycine cleavage system
BG95_00130	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BG95_00130	COG1918	ferrous iron import across plasma membrane
BG95_00135	COG1918	ferrous iron import across plasma membrane
BG95_00150	COG1555	photosystem II stabilization
BG95_00150	COG1596	polysaccharide export
BG95_00155	COG1355	regulation of microtubule-based process
BG95_00160	COG4796	Type ii and iii secretion system protein
BG95_00195	COG1122	ATPase activity
BG95_00200	COG2813	Specifically methylates the guanine in position
BG95_00205	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BG95_00205	COG1773	rubredoxin
BG95_00210	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BG95_00220	COG0268	Binds directly to 16S ribosomal RNA
BG95_00225	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BG95_00240	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BG95_00245	COG1923	regulation of RNA biosynthetic process
BG95_00260	COG0572	uridine kinase
BG95_00265	COG1530	ribonuclease E activity
BG95_00270	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BG95_00275	COG2131	deaminase
BG95_00280	COG1013	pyruvate-flavodoxin oxidoreductase activity
BG95_00295	COG2201	protein-glutamate methylesterase activity
BG95_00300	COG0497	DNA recombination
BG95_00305	COG0840	transmembrane signaling receptor activity
BG95_00310	COG2986	histidine ammonia-lyase
BG95_00350	COG1363	Peptidase, m42
BG95_00375	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BG95_00380	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BG95_00390	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BG95_00390	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BG95_00410	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BG95_00415	COG0058	SHG alpha-glucan phosphorylase activity
BG95_00420	COG0681	Belongs to the peptidase S26 family
BG95_00425	COG0335	large ribosomal subunit rRNA binding
BG95_00430	COG4752	Belongs to the RNA methyltransferase TrmD family
BG95_00435	COG0336	Belongs to the RNA methyltransferase TrmD family
BG95_00440	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BG95_00445	COG1837	Belongs to the UPF0109 family
BG95_00450	COG0228	four-way junction DNA binding
BG95_00455	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BG95_00480	COG1059	Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites)
BG95_00495	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BG95_00505	COG0840	transmembrane signaling receptor activity
BG95_00510	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BG95_00510	COG0731	radical SAM domain protein
BG95_00525	COG3279	Response regulator of the LytR AlgR family
BG95_00530	COG1966	Carbon starvation protein
BG95_00535	COG1215	transferase activity, transferring glycosyl groups
BG95_00550	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BG95_00580	COG1337	RAMP superfamily
BG95_00590	COG1353	crispr-associated protein
BG95_00620	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BG95_00625	COG1518	maintenance of DNA repeat elements
BG95_00630	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BG95_00645	COG0154	amidase activity
BG95_00660	COG1653	transport
BG95_00665	COG0438	transferase activity, transferring glycosyl groups
BG95_00675	COG5002	protein histidine kinase activity
BG95_00680	COG0745	RESPONSE REGULATOR receiver
BG95_00685	COG0704	Plays a role in the regulation of phosphate uptake
BG95_00690	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BG95_00710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BG95_00725	COG1105	Belongs to the carbohydrate kinase PfkB family
BG95_00730	COG1028	Short-chain dehydrogenase reductase Sdr
BG95_00735	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BG95_00740	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
BG95_00745	COG0745	RESPONSE REGULATOR receiver
BG95_00750	COG5002	protein histidine kinase activity
BG95_00765	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BG95_00770	COG0166	Belongs to the GPI family
BG95_00780	COG0237	dephospho-CoA kinase activity
BG95_00785	COG3706	GGDEF domain
BG95_00790	COG0556	nucleotide-excision repair
BG95_00820	COG1323	Belongs to the UPF0348 family
BG95_00825	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BG95_00830	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BG95_00835	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BG95_00840	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BG95_00850	COG0235	Class ii aldolase
BG95_00860	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BG95_00860	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BG95_00870	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BG95_00880	COG0840	transmembrane signaling receptor activity
BG95_00895	COG1785	Belongs to the alkaline phosphatase family
BG95_00905	COG0045	succinate-CoA ligase (ADP-forming) activity
BG95_00915	COG2985	domain, Protein
BG95_00915	COG0569	domain protein
BG95_00925	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BG95_00935	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BG95_00940	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BG95_00945	COG2171	N-acyltransferase activity
BG95_00950	COG0527	aspartate kinase activity
BG95_00955	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BG95_00965	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BG95_00975	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BG95_00980	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BG95_00985	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BG95_00990	COG1454	alcohol dehydrogenase
BG95_00995	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BG95_01010	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BG95_01015	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BG95_01020	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BG95_01020	COG0674	pyruvate-flavodoxin oxidoreductase activity
BG95_01030	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
BG95_01040	COG1122	ATPase activity
BG95_01045	COG1912	Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase
BG95_01060	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BG95_01065	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BG95_01070	COG1862	Preprotein translocase
BG95_01075	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BG95_01085	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
BG95_01090	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BG95_01105	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BG95_01125	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BG95_01125	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BG95_01140	COG1193	negative regulation of DNA recombination
BG95_01150	COG0306	phosphate transporter
BG95_01165	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BG95_01175	COG0549	Belongs to the carbamate kinase family
BG95_01180	COG0280	phosphate acetyltransferase
BG95_01190	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BG95_01195	COG1141	Ferredoxin
BG95_01235	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BG95_01240	COG1307	EDD domain protein, DegV family
BG95_01245	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BG95_01250	COG0542	response to heat
BG95_01280	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BG95_01290	COG1335	isochorismatase
BG95_01295	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BG95_01300	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BG95_01305	COG1136	(ABC) transporter
BG95_01315	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BG95_01320	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BG95_01325	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BG95_01335	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BG95_01350	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BG95_01355	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BG95_01360	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BG95_01360	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BG95_01365	COG0307	riboflavin synthase, alpha
BG95_01370	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BG95_01370	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BG95_01375	COG0840	transmembrane signaling receptor activity
BG95_01380	COG0822	iron-sulfur transferase activity
BG95_01385	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BG95_01390	COG0719	Fe-S assembly protein
BG95_01395	COG0719	Fe-S assembly protein
BG95_01415	COG0459	protein refolding
BG95_01420	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BG95_01435	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BG95_01445	COG0312	modulator of DNA gyrase
BG95_01450	COG0312	modulator of DNA gyrase
BG95_01455	COG3457	Alanine racemase
BG95_01465	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BG95_01470	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BG95_01480	COG2378	regulation of single-species biofilm formation
BG95_01505	COG1468	defense response to virus
BG95_01505	COG1518	maintenance of DNA repeat elements
BG95_01515	COG0442	prolyl-tRNA aminoacylation
BG95_01520	COG0215	cysteine-tRNA ligase activity
BG95_01525	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BG95_01530	COG2233	PERMEase
BG95_01540	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BG95_01545	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BG95_01550	COG1335	isochorismatase
BG95_01555	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BG95_01570	COG0297	glycogen (starch) synthase activity
BG95_01580	COG3290	protein histidine kinase activity
BG95_01580	COG3829	transcription factor binding
BG95_01590	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BG95_01595	COG2379	hydroxypyruvate reductase
BG95_01600	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BG95_01605	COG0484	heat shock protein binding
BG95_01610	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BG95_01615	COG1420	regulation of RNA biosynthetic process
BG95_01620	COG0477	Major facilitator Superfamily
BG95_01625	COG1827	regulation of RNA biosynthetic process
BG95_01630	COG1272	protein, Hemolysin III
BG95_01635	COG1047	Peptidyl-prolyl cis-trans
BG95_01650	COG1363	Peptidase, m42
BG95_01660	COG1758	RNA polymerase activity
BG95_01665	COG0194	GDP metabolic process
BG95_01670	COG2052	Domain of unknown function (DUF370)
BG95_01705	COG3426	butyrate kinase activity
BG95_01710	COG0280	phosphate acetyltransferase
BG95_01715	COG3426	butyrate kinase activity
BG95_01720	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BG95_01725	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BG95_01730	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BG95_01750	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BG95_01755	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BG95_01800	COG2359	stage V sporulation protein S
BG95_01810	COG0737	Belongs to the 5'-nucleotidase family
BG95_01815	COG1132	(ABC) transporter
BG95_01845	COG0301	tRNA thio-modification
BG95_01850	COG1937	Protein conserved in bacteria
BG95_01855	COG1132	(ABC) transporter
BG95_01875	COG0446	pyridine nucleotide-disulphide oxidoreductase
BG95_01890	COG0534	Mate efflux family protein
BG95_01895	COG0667	Aldo Keto reductase
BG95_01910	COG1131	(ABC) transporter
BG95_01920	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BG95_01920	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BG95_01925	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BG95_01925	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BG95_01940	COG1573	uracil-dna glycosylase
BG95_01945	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BG95_01945	COG0574	Belongs to the PEP-utilizing enzyme family
BG95_01955	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BG95_01960	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BG95_01965	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BG95_01970	COG0193	aminoacyl-tRNA hydrolase activity
BG95_01990	COG0529	Catalyzes the synthesis of activated sulfate
BG95_01995	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BG95_02000	COG4974	Belongs to the 'phage' integrase family
BG95_02005	COG0148	phosphopyruvate hydratase activity
BG95_02020	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BG95_02035	COG0116	Belongs to the methyltransferase superfamily
BG95_02040	COG1993	acr, cog1993
BG95_02045	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BG95_02055	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BG95_02060	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BG95_02070	COG2264	protein methyltransferase activity
BG95_02075	COG0739	heme binding
BG95_02080	COG1607	acyl-coa hydrolase
BG95_02085	COG3246	L-lysine catabolic process to acetate
BG95_02090	COG0604	alcohol dehydrogenase
BG95_02095	COG1509	lysine 2,3-aminomutase activity
BG95_02100	COG2030	dehydratase
BG95_02110	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BG95_02115	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BG95_02120	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BG95_02150	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BG95_02155	COG0037	tRNA processing
BG95_02170	COG1968	undecaprenyl-diphosphatase activity
BG95_02175	COG1228	amidohydrolase
BG95_02190	COG0424	maF-like protein
BG95_02195	COG2003	Belongs to the UPF0758 family
BG95_02210	COG1215	transferase activity, transferring glycosyl groups
BG95_02215	COG0463	Glycosyl transferase, family 2
BG95_02240	COG0793	Belongs to the peptidase S41A family
BG95_02260	COG1713	HD superfamily hydrolase involved in NAD metabolism
BG95_02265	COG1550	Protein conserved in bacteria
BG95_02270	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BG95_02275	COG0009	L-threonylcarbamoyladenylate synthase
BG95_02285	COG0481	GTPase activity
BG95_02290	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BG95_02295	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BG95_02300	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BG95_02305	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BG95_02315	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BG95_02325	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BG95_02330	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BG95_02335	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BG95_02340	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BG95_02345	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BG95_02350	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BG95_02355	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
BG95_02370	COG1461	Dihydroxyacetone kinase
BG95_02380	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BG95_02390	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BG95_02400	COG0495	leucyl-tRNA aminoacylation
BG95_02405	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BG95_02415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BG95_02420	COG0750	zinc metalloprotease
BG95_02425	COG2199	diguanylate cyclase activity
BG95_02425	COG2203	Gaf domain
BG95_02430	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BG95_02435	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BG95_02445	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BG95_02450	COG0543	2 iron, 2 sulfur cluster binding
BG95_02455	COG0167	dihydroorotate dehydrogenase activity
BG95_02460	COG0284	orotidine-5'-phosphate decarboxylase activity
BG95_02465	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BG95_02490	COG2183	response to ionizing radiation
BG95_02495	COG0835	chemotaxis
BG95_02500	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BG95_02510	COG1278	Cold shock
BG95_02515	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BG95_02520	COG0095	Lipoate-protein ligase
BG95_02540	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BG95_02545	COG3852	Histidine kinase
BG95_02550	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BG95_02560	COG1307	EDD domain protein, DegV family
BG95_02565	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BG95_02570	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BG95_02575	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BG95_02580	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BG95_02585	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BG95_02590	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BG95_02595	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BG95_02615	COG0006	proline dipeptidase activity
BG95_02625	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BG95_02630	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BG95_02630	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BG95_02640	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BG95_02645	COG5002	protein histidine kinase activity
BG95_02650	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BG95_02655	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BG95_02660	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BG95_02670	COG0537	adenosine 5'-monophosphoramidase activity
BG95_02675	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BG95_02685	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BG95_02695	COG4112	unkown
BG95_02700	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BG95_02705	COG1067	ATP-dependent peptidase activity
BG95_02710	COG0180	Tryptophanyl-tRNA synthetase
BG95_02715	COG0668	transmembrane transport
BG95_02720	COG0840	transmembrane signaling receptor activity
BG95_02735	COG4786	Flagellar basal body rod
BG95_02735	COG1256	bacterial-type flagellum assembly
BG95_02735	COG4786	Flagellar basal body rod
BG95_02735	COG1256	bacterial-type flagellum assembly
BG95_02740	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG95_02785	COG1760	l-serine dehydratase
BG95_02795	COG1543	Belongs to the glycosyl hydrolase 57 family
BG95_02800	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BG95_02805	COG1144	Oxidoreductase
BG95_02810	COG0674	pyruvate-flavodoxin oxidoreductase activity
BG95_02815	COG1013	pyruvate-flavodoxin oxidoreductase activity
BG95_02825	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BG95_02860	COG2199	diguanylate cyclase activity
BG95_02860	COG2203	Gaf domain
BG95_02865	COG0542	response to heat
BG95_02870	COG1773	rubredoxin
BG95_02890	COG4399	Belongs to the UPF0754 family
BG95_02895	COG1187	pseudouridine synthase activity
BG95_02905	COG1074	ATP-dependent DNA helicase activity
BG95_02920	COG0776	regulation of translation
BG95_02925	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BG95_02930	COG0432	Pfam Uncharacterised protein family UPF0047
BG95_02940	COG0803	Belongs to the bacterial solute-binding protein 9 family
BG95_02945	COG1121	(ABC) transporter
BG95_02950	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BG95_02960	COG0196	riboflavin kinase activity
BG95_02965	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BG95_02980	COG2252	PERMEase
BG95_03035	COG1131	(ABC) transporter
BG95_03040	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BG95_03060	COG1523	belongs to the glycosyl hydrolase 13 family
BG95_03065	COG0745	RESPONSE REGULATOR receiver
BG95_03070	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BG95_03080	COG0697	spore germination
BG95_03085	COG1077	Cell shape determining protein MreB Mrl
BG95_03090	COG4786	Flagellar basal body rod
BG95_03115	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BG95_03120	COG0416	fatty acid biosynthetic process
BG95_03125	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BG95_03140	COG1766	The M ring may be actively involved in energy transduction
BG95_03145	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BG95_03150	COG2176	DNA-directed DNA polymerase activity
BG95_03155	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BG95_03165	COG4717	serine-type aminopeptidase activity
BG95_03170	COG0528	UMP kinase activity
BG95_03175	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BG95_03180	COG1406	Chemotaxis phosphatase CheX
BG95_03185	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BG95_03190	COG1181	Belongs to the D-alanine--D-alanine ligase family
BG95_03220	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BG95_03235	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BG95_03260	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BG95_03265	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BG95_03280	COG0436	Aminotransferase
BG95_03285	COG2045	Belongs to the ComB family
BG95_03295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BG95_03305	COG0105	UTP biosynthetic process
BG95_03315	COG3864	Putative metallopeptidase domain
BG95_03325	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BG95_03330	COG0151	Belongs to the GarS family
BG95_03335	COG0138	bifunctional purine biosynthesis protein purh
BG95_03340	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BG95_03345	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BG95_03360	COG1132	(ABC) transporter
BG95_03365	COG0515	serine threonine protein kinase
BG95_03395	COG0840	transmembrane signaling receptor activity
BG95_03410	COG3833	ABC-type maltose transport systems, permease component
BG95_03415	COG1175	transmembrane transport
BG95_03425	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BG95_03440	COG0719	Fe-S assembly protein
BG95_03445	COG1137	ATPase activity
BG95_03490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG95_03500	COG1879	ABC-type sugar transport system periplasmic component
BG95_03505	COG1172	Belongs to the binding-protein-dependent transport system permease family
BG95_03510	COG1129	ABC transporter
BG95_03515	COG1869	D-ribose catabolic process
BG95_03540	COG4948	Mandelate Racemase Muconate Lactonizing
BG95_03570	COG1328	CTP reductase activity
BG95_03620	COG1525	nuclease
BG95_03655	COG0579	oxidoreductase
BG95_03660	COG3706	GGDEF domain
BG95_03660	COG0745	RESPONSE REGULATOR receiver
BG95_03665	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BG95_03690	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BG95_03695	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BG95_03700	COG0516	GMP reductase activity
BG95_03700	COG0517	IMP dehydrogenase activity
BG95_03705	COG0330	HflC and HflK could
BG95_03710	COG0330	HflC and HflK could
BG95_03715	COG1592	Rubrerythrin
BG95_03720	COG0751	glycine-tRNA ligase activity
BG95_03725	COG0752	glycyl-tRNA synthetase alpha subunit
BG95_03735	COG0772	Belongs to the SEDS family
BG95_03750	COG0360	Binds together with S18 to 16S ribosomal RNA
BG95_03755	COG0629	single-stranded DNA binding
BG95_03760	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BG95_03775	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BG95_03785	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BG95_03790	COG0250	Participates in transcription elongation, termination and antitermination
BG95_03795	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BG95_03800	COG0081	regulation of translation
BG95_03825	COG3706	GGDEF domain
BG95_03835	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BG95_03855	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BG95_03860	COG4659	FMN binding
BG95_03875	COG0489	protein tyrosine kinase activity
BG95_03875	COG3206	protein involved in exopolysaccharide biosynthesis
BG95_03880	COG1596	polysaccharide export
BG95_03890	COG0613	PHP domain protein
BG95_03895	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BG95_03905	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BG95_03910	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BG95_03925	COG1706	bacterial-type flagellum-dependent cell motility
BG95_03930	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BG95_03935	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
BG95_03940	COG0187	DNA topoisomerase II activity
BG95_03950	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BG95_03955	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BG95_03960	COG0517	IMP dehydrogenase activity
BG95_03960	COG0516	GMP reductase activity
BG95_04150	COG0572	uridine kinase
BG95_04190	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BG95_04275	COG0501	Belongs to the peptidase M48B family
BG95_04305	COG0445	tRNA wobble uridine modification
BG95_04310	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BG95_04315	COG1489	DNA binding
BG95_04330	COG0640	Transcriptional regulator
BG95_04335	COG0534	Mate efflux family protein
BG95_04340	COG0488	(ABC) transporter
BG95_04350	COG0489	protein tyrosine kinase activity
BG95_04360	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BG95_04365	COG0242	peptide deformylase activity
BG95_04370	COG0513	Belongs to the DEAD box helicase family
BG95_04380	COG1137	ATPase activity
BG95_04395	COG0745	RESPONSE REGULATOR receiver
BG95_04405	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BG95_04415	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BG95_04425	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BG95_04430	COG1684	flagellar biosynthetic protein fliR
BG95_04435	COG0840	transmembrane signaling receptor activity
BG95_04440	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BG95_04445	COG4869	propanediol catabolic process
BG95_04450	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BG95_04470	COG0306	phosphate transporter
BG95_04475	COG0306	phosphate transporter
BG95_04480	COG1392	Phosphate transport regulator
BG95_04500	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BG95_04505	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BG95_04510	COG0504	CTP synthase activity
BG95_04515	COG1546	Belongs to the CinA family
BG95_04515	COG1058	Belongs to the CinA family
BG95_04535	COG0210	DNA helicase
BG95_04545	COG1595	DNA-templated transcription, initiation
BG95_04560	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BG95_04580	COG0366	Alpha amylase catalytic
BG95_04585	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BG95_04605	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BG95_04620	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BG95_04625	COG0384	phenazine biosynthesis protein PhzF
BG95_04630	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BG95_04640	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BG95_04655	COG1151	hydroxylamine reductase activity
BG95_04670	COG0395	ABC-type sugar transport system, permease component
BG95_04675	COG3345	alpha-galactosidase
BG95_04680	COG3300	MHYT domain
BG95_04680	COG5001	Diguanylate cyclase
BG95_04685	COG0840	transmembrane signaling receptor activity
BG95_04710	COG0124	histidyl-tRNA synthetase
BG95_04720	COG4565	transcriptional regulatory protein
BG95_04730	COG1131	(ABC) transporter
BG95_04740	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BG95_04745	COG0366	Alpha amylase catalytic
BG95_04755	COG0840	transmembrane signaling receptor activity
BG95_04760	COG0646	methionine synthase
BG95_04760	COG1410	methionine synthase
BG95_04765	COG1476	TRANSCRIPTIONal
BG95_04780	COG0840	transmembrane signaling receptor activity
BG95_04785	COG3883	PFAM NLP P60 protein
BG95_04785	COG0791	NLP P60 protein
BG95_04795	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BG95_04805	COG1704	LemA family
BG95_04810	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BG95_04810	COG0519	Catalyzes the synthesis of GMP from XMP
BG95_04820	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BG95_04825	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BG95_04835	COG0395	ABC-type sugar transport system, permease component
BG95_04840	COG1175	transmembrane transport
BG95_04850	COG1472	Belongs to the glycosyl hydrolase 3 family
BG95_04865	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BG95_04875	COG2217	Heavy metal translocating P-type atpase
BG95_04920	COG0438	transferase activity, transferring glycosyl groups
BG95_04920	COG0297	glycogen (starch) synthase activity
BG95_04945	COG0745	RESPONSE REGULATOR receiver
BG95_04945	COG3706	GGDEF domain
BG95_04950	COG0395	ABC-type sugar transport system, permease component
BG95_04955	COG1175	transmembrane transport
BG95_04970	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BG95_04985	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BG95_05005	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BG95_05005	COG0072	phenylalanine-tRNA ligase activity
BG95_05010	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BG95_05015	COG1979	alcohol dehydrogenase
BG95_05020	COG0205	6-phosphofructokinase activity
BG95_05030	COG1006	Multisubunit Na H antiporter MnhC subunit
BG95_05035	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BG95_05040	COG2199	diguanylate cyclase activity
BG95_05040	COG2203	Gaf domain
BG95_05060	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BG95_05065	COG1492	cobalamin metabolic process
BG95_05095	COG1187	pseudouridine synthase activity
BG95_05100	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BG95_05120	COG1116	anion transmembrane transporter activity
BG95_05160	COG0628	permease
BG95_05195	COG1196	nuclear chromosome segregation
BG95_05205	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BG95_05255	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BG95_05285	COG5012	cobalamin binding
BG95_05290	COG0084	hydrolase, TatD family'
BG95_05295	COG0632	four-way junction helicase activity
BG95_05325	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BG95_05335	COG0154	amidase activity
BG95_05340	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BG95_05350	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BG95_05355	COG0772	Belongs to the SEDS family
BG95_05365	COG3706	GGDEF domain
BG95_05370	COG0101	tRNA pseudouridine synthase activity
BG95_05380	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BG95_05390	COG2198	Histidine kinase
BG95_05390	COG0643	Histidine kinase
BG95_05395	COG0835	chemotaxis
BG95_05400	COG2201	protein-glutamate methylesterase activity
BG95_05410	COG1338	Plays a role in the flagellum-specific transport system
BG95_05415	COG1987	bacterial-type flagellum assembly
BG95_05420	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BG95_05425	COG0052	Belongs to the universal ribosomal protein uS2 family
BG95_05430	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BG95_05435	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BG95_05440	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BG95_05460	COG0469	pyruvate kinase activity
BG95_05475	COG0564	pseudouridine synthase activity
BG95_05490	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BG95_05495	COG0049	tRNA binding
BG95_05500	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BG95_05505	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BG95_05510	COG0051	transcription antitermination factor activity, RNA binding
BG95_05515	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BG95_05520	COG0088	Forms part of the polypeptide exit tunnel
BG95_05525	COG0089	rRNA binding
BG95_05530	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BG95_05535	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BG95_05540	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BG95_05545	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BG95_05550	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BG95_05555	COG0255	Belongs to the universal ribosomal protein uL29 family
BG95_05560	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BG95_05565	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BG95_05570	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BG95_05575	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BG95_05580	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BG95_05585	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BG95_05590	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BG95_05595	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BG95_05600	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BG95_05605	COG1841	ribosomal large subunit assembly
BG95_05610	COG0200	Binds to the 23S rRNA
BG95_05615	COG0201	protein transport
BG95_05620	COG0563	adenylate kinase activity
BG95_05630	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BG95_05635	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BG95_05640	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BG95_05645	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BG95_05650	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BG95_05655	COG0202	RNA polymerase activity
BG95_05660	COG0203	ribosomal protein L17
BG95_05665	COG0544	peptidyl-prolyl cis-trans isomerase activity
BG95_05670	COG0740	serine-type endopeptidase activity
BG95_05675	COG0217	transcriptional regulatory protein
BG95_05685	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BG95_05695	COG0564	pseudouridine synthase activity
BG95_05700	COG0174	glutamine synthetase
BG95_05705	COG2342	PFAM TM1410 hypothetical-related protein
BG95_05720	COG0438	transferase activity, transferring glycosyl groups
BG95_05750	COG2199	diguanylate cyclase activity
BG95_05750	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BG95_05760	COG1214	PFAM Peptidase M22, glycoprotease
BG95_05765	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BG95_05775	COG2078	PFAM AMMECR1 domain protein
BG95_05790	COG0037	tRNA processing
BG95_05795	COG3681	Belongs to the UPF0597 family
BG95_05805	COG1070	Carbohydrate kinase
BG95_05810	COG1509	lysine 2,3-aminomutase activity
BG95_05830	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
BG95_05845	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BG95_05850	COG3481	metal-dependent phosphohydrolase, HD sub domain
BG95_05855	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BG95_05865	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BG95_05875	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BG95_05880	COG0358	DNA primase activity
BG95_05885	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BG95_05890	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BG95_05900	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BG95_05905	COG2868	ribosomal protein
BG95_05910	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BG95_05925	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BG95_05930	COG2176	DNA-directed DNA polymerase activity
BG95_05935	COG2359	stage V sporulation protein S
BG95_05945	COG3872	metal-dependent enzyme
BG95_05950	COG0019	diaminopimelate decarboxylase activity
BG95_05955	COG1473	amidohydrolase
BG95_05960	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BG95_05965	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BG95_05970	COG0012	GTP binding
BG95_05975	COG2052	Domain of unknown function (DUF370)
BG95_05980	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BG95_05985	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BG95_06005	COG0784	Response regulator, receiver
BG95_06005	COG3437	response regulator, receiver
BG95_06020	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BG95_06025	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BG95_06030	COG0085	RNA polymerase activity
BG95_06035	COG0222	ribosome binding
BG95_06040	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BG95_06055	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BG95_06060	COG0305	Participates in initiation and elongation during chromosome replication
BG95_06070	COG0251	oxidation-reduction process
BG95_06080	COG2211	Major facilitator Superfamily
BG95_06085	COG1803	Methylglyoxal synthase
BG95_06090	COG0561	phosphatase activity
BG95_06100	COG0017	Asparaginyl-tRNA synthetase
BG95_06105	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BG95_06120	COG1469	GTP cyclohydrolase I activity
BG95_06130	COG0438	transferase activity, transferring glycosyl groups
BG95_06135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BG95_06140	COG0592	DNA-directed DNA polymerase activity
BG95_06145	COG4969	Belongs to the N-Me-Phe pilin family
BG95_06150	COG4555	ABC transporter
BG95_06195	COG1376	ErfK ybiS ycfS ynhG family protein
BG95_06200	COG1028	Short-chain dehydrogenase reductase Sdr
BG95_06215	COG0785	Cytochrome C biogenesis protein
BG95_06260	COG1516	flagellar protein fliS
BG95_06275	COG4608	Belongs to the ABC transporter superfamily
BG95_06280	COG0444	Belongs to the ABC transporter superfamily
BG95_06290	COG0601	transmembrane transport
BG95_06300	COG0742	ribosomal rna small subunit methyltransferase
BG95_06305	COG1177	transmembrane transport
BG95_06310	COG1176	ABC-type spermidine putrescine transport system, permease component I
BG95_06315	COG3842	ATPase activity
BG95_06320	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BG95_06325	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BG95_06330	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BG95_06340	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BG95_06350	COG1811	Na channel or pump
BG95_06355	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BG95_06360	COG1480	7TM receptor with intracellular HD hydrolase
BG95_06365	COG1702	phosphate starvation-inducible protein PhoH
BG95_06375	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BG95_06380	COG5016	pyruvate
BG95_06380	COG0511	ligase activity, forming carbon-carbon bonds
BG95_06395	COG0346	lactoylglutathione lyase activity
BG95_06410	COG0653	protein targeting
BG95_06415	COG0850	regulation of cytokinetic process
BG95_06435	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BG95_06455	COG1677	Flagellar hook-basal body complex protein FliE
BG95_06460	COG0071	Belongs to the small heat shock protein (HSP20) family
BG95_06465	COG0443	Heat shock 70 kDa protein
BG95_06470	COG0393	Putative heavy-metal-binding
BG95_06475	COG1073	alpha beta
BG95_06490	COG1725	Transcriptional regulator
BG95_06505	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BG95_06510	COG0493	'glutamate synthase
BG95_06510	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BG95_06515	COG0543	2 iron, 2 sulfur cluster binding
BG95_06525	COG1940	carbohydrate kinase activity
BG95_06545	COG2201	protein-glutamate methylesterase activity
BG95_06585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BG95_06590	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BG95_06595	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BG95_06600	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BG95_06605	COG2137	regulation of response to DNA damage stimulus
BG95_06610	COG1418	mRNA catabolic process
BG95_06615	COG3842	ATPase activity
BG95_06630	COG1309	transcriptional regulator
BG95_06635	COG0254	rRNA binding
BG95_06640	COG1098	S1 RNA binding domain
BG95_06675	COG0483	inositol monophosphate 1-phosphatase activity
BG95_06680	COG0768	penicillin binding
BG95_06685	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BG95_06705	COG1610	YqeY-like protein
BG95_06715	COG0698	ribose 5-phosphate isomerase
BG95_06720	COG1366	Belongs to the anti-sigma-factor antagonist family
BG95_06725	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BG95_06730	COG1371	PFAM Archease protein family (DUF101 UPF0211)
BG95_06735	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BG95_06740	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BG95_06740	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BG95_06760	COG0444	Belongs to the ABC transporter superfamily
BG95_06765	COG4608	Belongs to the ABC transporter superfamily
BG95_06770	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
BG95_06770	COG0540	Belongs to the ATCase OTCase family
BG95_06775	COG2199	diguanylate cyclase activity
BG95_06775	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BG95_06780	COG0735	belongs to the Fur family
BG95_06785	COG0450	alkyl hydroperoxide reductase
BG95_06790	COG1773	rubredoxin
BG95_06800	COG1528	Iron-storage protein
BG95_06810	COG2033	superoxide reductase activity
BG95_06830	COG1435	thymidine kinase activity
BG95_06835	COG0737	Belongs to the 5'-nucleotidase family
BG95_06845	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BG95_06850	COG1863	multisubunit Na H antiporter MnhE subunit
BG95_06855	COG2212	antiporter activity
BG95_06870	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BG95_06870	COG2111	Na H antiporter
BG95_06875	COG1006	Multisubunit Na H antiporter MnhC subunit
BG95_06880	COG0651	ATP synthesis coupled electron transport
BG95_06885	COG0651	ATP synthesis coupled electron transport
BG95_06895	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BG95_06900	COG0649	NAD binding
BG95_06905	COG0649	NAD binding
BG95_06910	COG0493	'glutamate synthase
BG95_06950	COG0489	protein tyrosine kinase activity
BG95_06955	COG0446	pyridine nucleotide-disulphide oxidoreductase
BG95_06965	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BG95_06975	COG1045	serine acetyltransferase
BG95_06985	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BG95_06990	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BG95_06995	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BG95_07000	COG0047	phosphoribosylformylglycinamidine synthase activity
BG95_07005	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BG95_07020	COG2313	pseudouridylate synthase activity
BG95_07025	COG0622	Phosphoesterase
BG95_07030	COG1739	Uncharacterized protein family UPF0029
BG95_07035	COG0436	Aminotransferase
BG95_07040	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BG95_07045	COG0640	Transcriptional regulator
BG95_07060	COG0720	synthase
BG95_07065	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BG95_07070	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BG95_07090	COG0149	triose-phosphate isomerase activity
BG95_07090	COG0126	phosphoglycerate kinase activity
BG95_07095	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BG95_07110	COG1157	protein secretion by the type III secretion system
BG95_07120	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BG95_07125	COG0191	fructose-bisphosphate aldolase activity
BG95_07140	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BG95_07145	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BG95_07155	COG0233	cytoplasmic translational termination
BG95_07160	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BG95_07165	COG0575	Belongs to the CDS family
BG95_07170	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BG95_07175	COG1077	Cell shape determining protein MreB Mrl
BG95_07190	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BG95_07210	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BG95_07225	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BG95_07235	COG1582	Flagellar protein (FlbD)
BG95_07245	COG1360	Flagellar Motor Protein
BG95_07255	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BG95_07260	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BG95_07260	COG1776	CheC inhibitor of MCP methylation
BG95_07270	COG0733	neurotransmitter:sodium symporter activity
BG95_07280	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BG95_07285	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BG95_07290	COG2239	Acts as a magnesium transporter
BG95_07300	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BG95_07305	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BG95_07320	COG1120	ATPase activity
BG95_07325	COG0741	lytic transglycosylase activity
BG95_07340	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BG95_07345	COG1490	D-aminoacyl-tRNA deacylase activity
BG95_07350	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BG95_07365	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BG95_07365	COG2080	2 iron, 2 sulfur cluster binding
BG95_07370	COG2080	2 iron, 2 sulfur cluster binding
BG95_07390	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BG95_07405	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BG95_07420	COG0330	HflC and HflK could
BG95_07430	COG3314	Sporulation integral membrane protein YlbJ
BG95_07435	COG0019	diaminopimelate decarboxylase activity
BG95_07450	COG0357	Ribosomal RNA small subunit methyltransferase G
BG95_07455	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BG95_07500	COG0584	glycerophosphoryl diester phosphodiesterase
BG95_07505	COG0156	8-amino-7-oxononanoate synthase activity
BG95_07510	COG1063	alcohol dehydrogenase
BG95_07515	COG0534	Mate efflux family protein
BG95_07545	COG1027	Aspartate ammonia-lyase
BG95_07550	COG1160	GTP binding
BG95_07570	COG0572	uridine kinase
BG95_07575	COG1078	dGTPase activity
BG95_07580	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BG95_07590	COG1994	Peptidase M50
BG95_07605	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BG95_07610	COG1660	Displays ATPase and GTPase activities
BG95_07615	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BG95_07625	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BG95_07630	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BG95_07635	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BG95_07645	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BG95_07655	COG1132	(ABC) transporter
BG95_07665	COG0444	Belongs to the ABC transporter superfamily
BG95_07670	COG4608	Belongs to the ABC transporter superfamily
BG95_07680	COG0601	transmembrane transport
BG95_07685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BG95_07720	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BG95_07725	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BG95_07730	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BG95_07740	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BG95_07745	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BG95_07765	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BG95_07770	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BG95_07770	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BG95_07790	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BG95_07795	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
BG95_07805	COG0735	belongs to the Fur family
BG95_07810	COG0195	Participates in both transcription termination and antitermination
BG95_07815	COG0779	Required for maturation of 30S ribosomal subunits
BG95_07840	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BG95_07845	COG1419	protein localization to endoplasmic reticulum
BG95_07850	COG0455	bacterial-type flagellum organization
BG95_07865	COG1776	CheC inhibitor of MCP methylation
BG95_07870	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BG95_07875	COG1191	sigma factor activity
BG95_07905	COG0617	tRNA 3'-terminal CCA addition
BG95_07915	COG1234	tRNA 3'-trailer cleavage
BG95_07920	COG0359	binds to the 23S rRNA
BG95_07925	COG2890	protein-(glutamine-N5) methyltransferase activity
BG95_07930	COG2151	metal-sulfur cluster biosynthetic enzyme
BG95_07935	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BG95_07940	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BG95_07950	COG0343	queuine tRNA-ribosyltransferase activity
BG95_07965	COG0730	response to heat
BG95_07970	COG1774	PSP1 C-terminal conserved region
BG95_07980	COG0802	atpase or kinase
BG95_07985	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BG95_07990	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BG95_08000	COG5002	protein histidine kinase activity
BG95_08005	COG1639	'signal transduction protein
BG95_08010	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BG95_08020	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BG95_08040	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BG95_08050	COG1162	GTPase activity
BG95_08055	COG1032	radical SAM domain protein
BG95_08080	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BG95_08090	COG0557	exoribonuclease II activity
BG95_08095	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BG95_08095	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BG95_08100	COG2738	Putative neutral zinc metallopeptidase
BG95_08110	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BG95_08115	COG3956	TIGRFAM MazG family protein
BG95_08120	COG0628	permease
BG95_08145	COG0587	DNA-directed DNA polymerase activity
BG95_08150	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BG95_08155	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BG95_08160	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BG95_08165	COG4251	negative regulation of phosphorylation
BG95_08165	COG3706	GGDEF domain
BG95_08165	COG5001	Diguanylate cyclase
BG95_08165	COG2203	Gaf domain
BG95_08170	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BG95_08175	COG1362	aminopeptidase activity
BG95_08200	COG1482	cell wall glycoprotein biosynthetic process
BG95_08210	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BG95_08215	COG2255	four-way junction helicase activity
BG95_08220	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BG95_08230	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BG95_08235	COG0704	Plays a role in the regulation of phosphate uptake
BG95_08245	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BG95_08260	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BG95_08270	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BG95_08275	COG2894	cell division
BG95_08300	COG0552	protein localization to endoplasmic reticulum
BG95_08315	COG1959	2 iron, 2 sulfur cluster binding
BG95_08320	COG0482	sulfurtransferase activity
BG95_08330	COG1316	TRANSCRIPTIONal
BG95_08335	COG1515	deoxyribonuclease V activity
BG95_08345	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BG95_08360	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BG95_08365	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BG95_08370	COG0157	Belongs to the NadC ModD family
BG95_08375	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BG95_08390	COG0366	Alpha amylase catalytic
BG95_08395	COG0840	transmembrane signaling receptor activity
BG95_08400	COG0516	GMP reductase activity
BG95_08400	COG0517	IMP dehydrogenase activity
BG95_08410	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BG95_08420	COG4657	Part of a membrane complex involved in electron transport
BG95_08425	COG4660	Part of a membrane complex involved in electron transport
BG95_08435	COG4658	electron transport chain
BG95_08440	COG4656	Part of a membrane complex involved in electron transport
BG95_08450	COG0525	valine-tRNA ligase activity
BG95_08455	COG0285	dihydrofolate synthase activity
BG95_08460	COG0799	negative regulation of ribosome biogenesis
BG95_08465	COG0402	S-adenosylhomocysteine deaminase activity
BG95_08470	COG1242	4 iron, 4 sulfur cluster binding
BG95_08475	COG4555	ABC transporter
BG95_08480	COG0842	Transport permease protein
BG95_08490	COG0641	radical SAM
BG95_08525	COG1132	(ABC) transporter
BG95_08555	COG1132	(ABC) transporter
BG95_08660	COG1635	Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur
BG95_08675	COG0351	phosphomethylpyrimidine kinase
BG95_08675	COG1992	Thiamine-phosphate synthase
BG95_08680	COG0205	6-phosphofructokinase activity
BG95_08690	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BG95_08725	COG0571	ribonuclease III activity
BG95_08730	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BG95_08730	COG0519	Catalyzes the synthesis of GMP from XMP
BG95_08735	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BG95_08735	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BG95_08740	COG0728	peptidoglycan biosynthetic process
BG95_08750	COG0758	DNA mediated transformation
BG95_08755	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BG95_08765	COG1185	polyribonucleotide nucleotidyltransferase activity
BG95_08770	COG0612	Peptidase, M16
BG95_08780	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BG95_08785	COG1175	transmembrane transport
BG95_08790	COG0395	ABC-type sugar transport system, permease component
BG95_08795	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BG95_08800	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BG95_08805	COG1366	Belongs to the anti-sigma-factor antagonist family
BG95_08810	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BG95_08815	COG0539	negative regulation of cytoplasmic translation
BG95_08820	COG1160	GTP binding
BG95_08840	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BG95_08845	COG0594	ribonuclease P activity
BG95_08850	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BG95_08855	COG0706	membrane insertase activity
BG95_08860	COG1847	R3H domain protein
BG95_08875	COG0174	glutamine synthetase
BG95_08880	COG2203	Gaf domain
BG95_08880	COG2199	diguanylate cyclase activity
BG95_08890	COG2723	6-phospho-beta-galactosidase activity
BG95_08920	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BG95_08955	COG1454	alcohol dehydrogenase
BG95_08955	COG1012	belongs to the aldehyde dehydrogenase family
BG95_08980	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BG95_09015	COG1337	RAMP superfamily
BG95_09085	COG2373	Large extracellular alpha-helical protein
BG95_09095	COG3234	Protein of unknown function (DUF1175)
BG95_09110	COG0730	response to heat
BG95_09115	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BG95_09140	COG3842	ATPase activity
BG95_09145	COG0438	transferase activity, transferring glycosyl groups