locus-tag class description Y592_00005 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_00005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Y592_00020 PF00270 DEAD/DEAH box helicase Y592_00020 PF00271 Helicase conserved C-terminal domain Y592_00020 PF00570 HRDC domain Y592_00020 PF16124 RecQ zinc-binding Y592_00020 PF09382 RQC domain Y592_00025 PF02481 DNA recombination-mediator protein A Y592_00030 PF01734 Patatin-like phospholipase Y592_00060 PF00905 Penicillin binding protein transpeptidase domain Y592_00060 PF03717 Penicillin-binding Protein dimerisation domain Y592_00060 PF03793 PASTA domain Y592_00070 PF01795 MraW methylase family Y592_00075 PF01979 Amidohydrolase family Y592_00080 PF00291 Pyridoxal-phosphate dependent enzyme Y592_00085 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Y592_00085 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Y592_00090 PF13382 Adenine deaminase C-terminal domain Y592_00090 PF01979 Amidohydrolase family Y592_00095 PF00005 ABC transporter Y592_00095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_00100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_00100 PF00005 ABC transporter Y592_00110 PF00528 Binding-protein-dependent transport system inner membrane component Y592_00115 PF02151 UvrB/uvrC motif Y592_00115 PF08459 UvrC Helix-hairpin-helix N-terminal Y592_00115 PF01541 GIY-YIG catalytic domain Y592_00125 PF01597 Glycine cleavage H-protein Y592_00130 PF04023 FeoA domain Y592_00130 PF07670 Nucleoside recognition Y592_00130 PF02421 Ferrous iron transport protein B Y592_00130 PF17910 FeoB cytosolic helical domain Y592_00130 PF07664 Ferrous iron transport protein B C terminus Y592_00135 PF04023 FeoA domain Y592_00150 PF10531 SLBB domain Y592_00155 PF01875 Memo-like protein Y592_00160 PF03958 Bacterial type II/III secretion system short domain Y592_00160 PF00263 Bacterial type II and III secretion system protein Y592_00190 PF00482 Type II secretion system (T2SS), protein F Y592_00195 PF00005 ABC transporter Y592_00200 PF05175 Methyltransferase small domain Y592_00205 PF01613 Flavin reductase like domain Y592_00205 PF00301 Rubredoxin Y592_00210 PF02780 Transketolase, C-terminal domain Y592_00210 PF02779 Transketolase, pyrimidine binding domain Y592_00210 PF00456 Transketolase, thiamine diphosphate binding domain Y592_00220 PF01649 Ribosomal protein S20 Y592_00225 PF02773 S-adenosylmethionine synthetase, C-terminal domain Y592_00225 PF02772 S-adenosylmethionine synthetase, central domain Y592_00225 PF00438 S-adenosylmethionine synthetase, N-terminal domain Y592_00240 PF13167 GTP-binding GTPase N-terminal Y592_00240 PF01926 50S ribosome-binding GTPase Y592_00240 PF16360 GTP-binding GTPase Middle Region Y592_00245 PF17209 Hfq protein Y592_00260 PF00485 Phosphoribulokinase / Uridine kinase family Y592_00265 PF10150 Ribonuclease E/G family Y592_00270 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Y592_00270 PF05221 S-adenosyl-L-homocysteine hydrolase Y592_00275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Y592_00280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y592_00295 PF00072 Response regulator receiver domain Y592_00295 PF01339 CheB methylesterase Y592_00300 PF00395 S-layer homology domain Y592_00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_00315 PF00221 Aromatic amino acid lyase Y592_00320 PF01923 Cobalamin adenosyltransferase Y592_00355 PF05343 M42 glutamyl aminopeptidase Y592_00380 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Y592_00380 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Y592_00385 PF02390 Putative methyltransferase Y592_00395 PF01256 Carbohydrate kinase Y592_00395 PF03853 YjeF-related protein N-terminus Y592_00400 PF01464 Transglycosylase SLT domain Y592_00400 PF14718 Soluble lytic murein transglycosylase L domain Y592_00405 PF06750 Bacterial Peptidase A24 N-terminal domain Y592_00405 PF01478 Type IV leader peptidase family Y592_00415 PF13180 PDZ domain Y592_00420 PF00343 Carbohydrate phosphorylase Y592_00425 PF10502 Signal peptidase, peptidase S26 Y592_00430 PF01245 Ribosomal protein L19 Y592_00435 PF09936 SAM-dependent RNA methyltransferase Y592_00440 PF01746 tRNA (Guanine-1)-methyltransferase Y592_00445 PF01782 RimM N-terminal domain Y592_00445 PF05239 PRC-barrel domain Y592_00455 PF00886 Ribosomal protein S16 Y592_00460 PF02881 SRP54-type protein, helical bundle domain Y592_00460 PF00448 SRP54-type protein, GTPase domain Y592_00460 PF02978 Signal peptide binding domain Y592_00465 PF01547 Bacterial extracellular solute-binding protein Y592_00470 PF00528 Binding-protein-dependent transport system inner membrane component Y592_00500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Y592_00500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Y592_00510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_00515 PF04055 Radical SAM superfamily Y592_00515 PF01926 50S ribosome-binding GTPase Y592_00515 PF01018 GTP1/OBG Y592_00530 PF04397 LytTr DNA-binding domain Y592_00530 PF00072 Response regulator receiver domain Y592_00535 PF02554 Carbon starvation protein CstA Y592_00535 PF13722 5TM C-terminal transporter carbon starvation CstA Y592_00540 PF00535 Glycosyl transferase family 2 Y592_00555 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Y592_00555 PF14490 Helix-hairpin-helix containing domain Y592_00555 PF13538 UvrD-like helicase C-terminal domain Y592_00560 PF03600 Citrate transporter Y592_00575 PF03787 RAMP superfamily Y592_00585 PF03787 RAMP superfamily Y592_00595 PF18211 Csm1 subunit domain B Y592_00625 PF09827 CRISPR associated protein Cas2 Y592_00630 PF01867 CRISPR associated protein Cas1 Y592_00635 PF09827 CRISPR associated protein Cas2 Y592_00650 PF01425 Amidase Y592_00655 PF00528 Binding-protein-dependent transport system inner membrane component Y592_00660 PF00528 Binding-protein-dependent transport system inner membrane component Y592_00665 PF01547 Bacterial extracellular solute-binding protein Y592_00670 PF00534 Glycosyl transferases group 1 Y592_00680 PF16736 Single Cache-like Y592_00680 PF00989 PAS fold Y592_00680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_00680 PF00512 His Kinase A (phospho-acceptor) domain Y592_00685 PF00486 Transcriptional regulatory protein, C terminal Y592_00685 PF00072 Response regulator receiver domain Y592_00690 PF01895 PhoU domain Y592_00695 PF00005 ABC transporter Y592_00700 PF00528 Binding-protein-dependent transport system inner membrane component Y592_00710 PF12849 PBP superfamily domain Y592_00715 PF13302 Acetyltransferase (GNAT) domain Y592_00730 PF00294 pfkB family carbohydrate kinase Y592_00740 PF02361 Cobalt transport protein Y592_00745 PF03030 Inorganic H+ pyrophosphatase Y592_00750 PF00486 Transcriptional regulatory protein, C terminal Y592_00750 PF00072 Response regulator receiver domain Y592_00755 PF16736 Single Cache-like Y592_00755 PF00989 PAS fold Y592_00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_00755 PF00512 His Kinase A (phospho-acceptor) domain Y592_00760 PF00591 Glycosyl transferase family, a/b domain Y592_00760 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Y592_00760 PF02885 Glycosyl transferase family, helical bundle domain Y592_00770 PF00156 Phosphoribosyl transferase domain Y592_00775 PF00342 Phosphoglucose isomerase Y592_00785 PF01121 Dephospho-CoA kinase Y592_00790 PF08448 PAS fold Y592_00790 PF00990 Diguanylate cyclase, GGDEF domain Y592_00795 PF17757 UvrB interaction domain Y592_00795 PF12344 Ultra-violet resistance protein B Y592_00795 PF02151 UvrB/uvrC motif Y592_00795 PF00271 Helicase conserved C-terminal domain Y592_00795 PF04851 Type III restriction enzyme, res subunit Y592_00805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y592_00825 PF05636 HIGH Nucleotidyl Transferase Y592_00830 PF17757 UvrB interaction domain Y592_00830 PF03461 TRCF domain Y592_00830 PF00271 Helicase conserved C-terminal domain Y592_00830 PF00270 DEAD/DEAH box helicase Y592_00830 PF02559 CarD-like/TRCF domain Y592_00835 PF00633 Helix-hairpin-helix motif Y592_00835 PF10635 DisA bacterial checkpoint controller linker region Y592_00835 PF02457 DisA bacterial checkpoint controller nucleotide-binding Y592_00840 PF01174 SNO glutamine amidotransferase family Y592_00845 PF01680 SOR/SNZ family Y592_00855 PF00596 Class II Aldolase and Adducin N-terminal domain Y592_00865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Y592_00865 PF02152 Dihydroneopterin aldolase Y592_00870 PF00682 HMGL-like Y592_00870 PF02436 Conserved carboxylase domain Y592_00870 PF00364 Biotin-requiring enzyme Y592_00875 PF00009 Elongation factor Tu GTP binding domain Y592_00875 PF04760 Translation initiation factor IF-2, N-terminal region Y592_00875 PF11987 Translation-initiation factor 2 Y592_00885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_00900 PF00245 Alkaline phosphatase Y592_00910 PF08442 ATP-grasp domain Y592_00910 PF00549 CoA-ligase Y592_00915 PF00549 CoA-ligase Y592_00915 PF02629 CoA binding domain Y592_00920 PF06826 Predicted Permease Membrane Region Y592_00920 PF02080 TrkA-C domain Y592_00930 PF02774 Semialdehyde dehydrogenase, dimerisation domain Y592_00930 PF01118 Semialdehyde dehydrogenase, NAD binding domain Y592_00935 PF01678 Diaminopimelate epimerase Y592_00940 PF00701 Dihydrodipicolinate synthetase family Y592_00945 PF05173 Dihydrodipicolinate reductase, C-terminus Y592_00945 PF01113 Dihydrodipicolinate reductase, N-terminus Y592_00950 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Y592_00950 PF00132 Bacterial transferase hexapeptide (six repeats) Y592_00950 PF14602 Hexapeptide repeat of succinyl-transferase Y592_00955 PF00696 Amino acid kinase family Y592_00955 PF13840 ACT domain Y592_00955 PF01842 ACT domain Y592_00960 PF00202 Aminotransferase class-III Y592_00965 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Y592_00970 PF00795 Carbon-nitrogen hydrolase Y592_00980 PF08669 Glycine cleavage T-protein C-terminal barrel domain Y592_00980 PF01571 Aminomethyltransferase folate-binding domain Y592_00985 PF02347 Glycine cleavage system P-protein Y592_00990 PF02347 Glycine cleavage system P-protein Y592_00995 PF00465 Iron-containing alcohol dehydrogenase Y592_01000 PF10672 S-adenosylmethionine-dependent methyltransferase Y592_01000 PF17785 PUA-like domain Y592_01010 PF00293 NUDIX domain Y592_01015 PF07687 Peptidase dimerisation domain Y592_01015 PF01546 Peptidase family M20/M25/M40 Y592_01020 PF17391 Urocanase N-terminal domain Y592_01020 PF01175 Urocanase Rossmann-like domain Y592_01020 PF17392 Urocanase C-terminal domain Y592_01025 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Y592_01025 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Y592_01025 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Y592_01035 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Y592_01045 PF00005 ABC transporter Y592_01050 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase Y592_01060 PF03030 Inorganic H+ pyrophosphatase Y592_01065 PF07549 SecD/SecF GG Motif Y592_01065 PF02355 Protein export membrane protein Y592_01070 PF02355 Protein export membrane protein Y592_01070 PF07549 SecD/SecF GG Motif Y592_01075 PF02699 Preprotein translocase subunit Y592_01080 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Y592_01080 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Y592_01090 PF02511 Thymidylate synthase complementing protein Y592_01095 PF01351 Ribonuclease HII Y592_01110 PF02146 Sir2 family Y592_01125 PF02601 Exonuclease VII, large subunit Y592_01125 PF13742 OB-fold nucleic acid binding domain Y592_01130 PF01367 5'-3' exonuclease, C-terminal SAM fold Y592_01130 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Y592_01130 PF00476 DNA polymerase family A Y592_01130 PF01612 3'-5' exonuclease Y592_01140 PF02491 SHS2 domain inserted in FTSA Y592_01145 PF01713 Smr domain Y592_01145 PF00488 MutS domain V Y592_01170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Y592_01180 PF00696 Amino acid kinase family Y592_01185 PF01515 Phosphate acetyl/butaryl transferase Y592_01195 PF00308 Bacterial dnaA protein Y592_01195 PF11638 DnaA N-terminal domain Y592_01195 PF08299 Bacterial dnaA protein helix-turn-helix Y592_01240 PF02592 Putative vitamin uptake transporter Y592_01245 PF02645 Uncharacterised protein, DegV family COG1307 Y592_01250 PF18073 Rubredoxin metal binding domain Y592_01255 PF00004 ATPase family associated with various cellular activities (AAA) Y592_01255 PF07724 AAA domain (Cdc48 subfamily) Y592_01255 PF17871 AAA lid domain Y592_01255 PF02861 Clp amino terminal domain, pathogenicity island component Y592_01255 PF10431 C-terminal, D2-small domain, of ClpB protein Y592_01275 PF01212 Beta-eliminating lyase Y592_01285 PF04055 Radical SAM superfamily Y592_01290 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_01295 PF00857 Isochorismatase family Y592_01300 PF04055 Radical SAM superfamily Y592_01300 PF06968 Biotin and Thiamin Synthesis associated domain Y592_01305 PF00270 DEAD/DEAH box helicase Y592_01305 PF00271 Helicase conserved C-terminal domain Y592_01305 PF17191 RecG wedge domain Y592_01310 PF00005 ABC transporter Y592_01320 PF13288 DXP reductoisomerase C-terminal domain Y592_01320 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Y592_01320 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Y592_01325 PF01497 Periplasmic binding protein Y592_01330 PF01032 FecCD transport family Y592_01340 PF04542 Sigma-70 region 2 Y592_01340 PF00140 Sigma-70 factor, region 1.2 Y592_01340 PF03979 Sigma-70 factor, region 1.1 Y592_01340 PF04545 Sigma-70, region 4 Y592_01340 PF04539 Sigma-70 region 3 Y592_01355 PF03600 Citrate transporter Y592_01360 PF00885 6,7-dimethyl-8-ribityllumazine synthase Y592_01365 PF00925 GTP cyclohydrolase II Y592_01365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Y592_01370 PF00677 Lumazine binding domain Y592_01375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Y592_01375 PF01872 RibD C-terminal domain Y592_01380 PF02743 Cache domain Y592_01380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_01380 PF00672 HAMP domain Y592_01385 PF01592 NifU-like N terminal domain Y592_01390 PF00266 Aminotransferase class-V Y592_01395 PF01458 Uncharacterized protein family (UPF0051) Y592_01400 PF01458 Uncharacterized protein family (UPF0051) Y592_01405 PF00005 ABC transporter Y592_01420 PF00118 TCP-1/cpn60 chaperonin family Y592_01425 PF00166 Chaperonin 10 Kd subunit Y592_01440 PF00636 Ribonuclease III domain Y592_01450 PF01523 Putative modulator of DNA gyrase Y592_01455 PF01523 Putative modulator of DNA gyrase Y592_01460 PF01168 Alanine racemase, N-terminal domain Y592_01470 PF02547 Queuosine biosynthesis protein Y592_01475 PF00312 Ribosomal protein S15 Y592_01485 PF13280 WYL domain Y592_01485 PF08279 HTH domain Y592_01510 PF01867 CRISPR associated protein Cas1 Y592_01510 PF01930 Domain of unknown function DUF83 Y592_01515 PF09827 CRISPR associated protein Cas2 Y592_01520 PF04073 Aminoacyl-tRNA editing domain Y592_01520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Y592_01520 PF03129 Anticodon binding domain Y592_01525 PF09190 DALR domain Y592_01525 PF01406 tRNA synthetases class I (C) catalytic domain Y592_01530 PF00749 tRNA synthetases class I (E and Q), catalytic domain Y592_01535 PF00860 Permease family Y592_01545 PF00919 Uncharacterized protein family UPF0004 Y592_01545 PF01938 TRAM domain Y592_01545 PF04055 Radical SAM superfamily Y592_01550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Y592_01550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Y592_01555 PF00857 Isochorismatase family Y592_01560 PF01545 Cation efflux family Y592_01560 PF16916 Dimerisation domain of Zinc Transporter Y592_01575 PF00534 Glycosyl transferases group 1 Y592_01575 PF08323 Starch synthase catalytic domain Y592_01585 PF00989 PAS fold Y592_01585 PF00158 Sigma-54 interaction domain Y592_01585 PF02954 Bacterial regulatory protein, Fis family Y592_01595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y592_01595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y592_01600 PF13660 Domain of unknown function (DUF4147) Y592_01600 PF05161 MOFRL family Y592_01605 PF02540 NAD synthase Y592_01610 PF00684 DnaJ central domain Y592_01610 PF00226 DnaJ domain Y592_01610 PF01556 DnaJ C terminal domain Y592_01615 PF01025 GrpE Y592_01620 PF01628 HrcA protein C terminal domain Y592_01625 PF07690 Major Facilitator Superfamily Y592_01630 PF02829 3H domain Y592_01630 PF08279 HTH domain Y592_01635 PF03006 Haemolysin-III related Y592_01640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Y592_01650 PF13186 Iron-sulfur cluster-binding domain Y592_01650 PF04055 Radical SAM superfamily Y592_01655 PF05343 M42 glutamyl aminopeptidase Y592_01665 PF01192 RNA polymerase Rpb6 Y592_01670 PF00625 Guanylate kinase Y592_01675 PF04025 Domain of unknown function (DUF370) Y592_01710 PF00871 Acetokinase family Y592_01715 PF01515 Phosphate acetyl/butaryl transferase Y592_01720 PF00871 Acetokinase family Y592_01725 PF00155 Aminotransferase class I and II Y592_01730 PF00266 Aminotransferase class-V Y592_01735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y592_01735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y592_01755 PF01546 Peptidase family M20/M25/M40 Y592_01755 PF07687 Peptidase dimerisation domain Y592_01760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Y592_01760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Y592_01765 PF01979 Amidohydrolase family Y592_01770 PF01979 Amidohydrolase family Y592_01775 PF01180 Dihydroorotate dehydrogenase Y592_01805 PF04232 Stage V sporulation protein S (SpoVS) Y592_01815 PF02872 5'-nucleotidase, C-terminal domain Y592_01815 PF00149 Calcineurin-like phosphoesterase Y592_01820 PF00005 ABC transporter Y592_01820 PF00664 ABC transporter transmembrane region Y592_01850 PF02926 THUMP domain Y592_01850 PF02568 Thiamine biosynthesis protein (ThiI) Y592_01855 PF02583 Metal-sensitive transcriptional repressor Y592_01860 PF00664 ABC transporter transmembrane region Y592_01860 PF00005 ABC transporter Y592_01865 PF00664 ABC transporter transmembrane region Y592_01865 PF00005 ABC transporter Y592_01875 PF00465 Iron-containing alcohol dehydrogenase Y592_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_01880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y592_01890 PF01432 Peptidase family M3 Y592_01890 PF08439 Oligopeptidase F Y592_01895 PF01554 MatE Y592_01900 PF00248 Aldo/keto reductase family Y592_01905 PF02073 Thermophilic metalloprotease (M29) Y592_01915 PF00005 ABC transporter Y592_01925 PF16193 AAA C-terminal domain Y592_01925 PF01661 Macro domain Y592_01925 PF12002 MgsA AAA+ ATPase C terminal Y592_01925 PF05496 Holliday junction DNA helicase RuvB P-loop domain Y592_01930 PF16193 AAA C-terminal domain Y592_01930 PF01661 Macro domain Y592_01930 PF12002 MgsA AAA+ ATPase C terminal Y592_01930 PF05496 Holliday junction DNA helicase RuvB P-loop domain Y592_01935 PF16363 GDP-mannose 4,6 dehydratase Y592_01945 PF03167 Uracil DNA glycosylase superfamily Y592_01950 PF00391 PEP-utilising enzyme, mobile domain Y592_01950 PF02896 PEP-utilising enzyme, TIM barrel domain Y592_01950 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Y592_01960 PF12804 MobA-like NTP transferase domain Y592_01960 PF00132 Bacterial transferase hexapeptide (six repeats) Y592_01965 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Y592_01965 PF14572 Phosphoribosyl synthetase-associated domain Y592_01970 PF14693 Ribosomal protein TL5, C-terminal domain Y592_01970 PF01386 Ribosomal L25p family Y592_01975 PF01195 Peptidyl-tRNA hydrolase Y592_02000 PF17760 UvrA interaction domain Y592_02000 PF17755 UvrA DNA-binding domain Y592_02000 PF00005 ABC transporter Y592_02005 PF02899 Phage integrase, N-terminal SAM-like domain Y592_02005 PF00589 Phage integrase family Y592_02010 PF00113 Enolase, C-terminal TIM barrel domain Y592_02010 PF03952 Enolase, N-terminal domain Y592_02020 PF00395 S-layer homology domain Y592_02025 PF00579 tRNA synthetases class I (W and Y) Y592_02025 PF01479 S4 domain Y592_02040 PF02926 THUMP domain Y592_02040 PF01170 Putative RNA methylase family UPF0020 Y592_02045 PF02641 Uncharacterized ACR, COG1993 Y592_02050 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Y592_02060 PF01725 Ham1 family Y592_02065 PF02590 Predicted SPOUT methyltransferase Y592_02080 PF04225 Opacity-associated protein A LysM-like domain Y592_02080 PF01551 Peptidase family M23 Y592_02085 PF03061 Thioesterase superfamily Y592_02090 PF05853 beta-keto acid cleavage enzyme Y592_02100 PF12544 Lysine-2,3-aminomutase Y592_02100 PF04055 Radical SAM superfamily Y592_02105 PF01575 MaoC like domain Y592_02115 PF00488 MutS domain V Y592_02115 PF05190 MutS family domain IV Y592_02115 PF05188 MutS domain II Y592_02115 PF01624 MutS domain I Y592_02115 PF05192 MutS domain III Y592_02120 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Y592_02125 PF02310 B12 binding domain Y592_02125 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Y592_02160 PF00004 ATPase family associated with various cellular activities (AAA) Y592_02160 PF01434 Peptidase family M41 Y592_02160 PF17862 AAA+ lid domain Y592_02165 PF01171 PP-loop family Y592_02165 PF11734 TilS substrate C-terminal domain Y592_02180 PF02673 Bacitracin resistance protein BacA Y592_02185 PF01979 Amidohydrolase family Y592_02200 PF02545 Maf-like protein Y592_02205 PF04002 RadC-like JAB domain Y592_02220 PF00535 Glycosyl transferase family 2 Y592_02225 PF00535 Glycosyl transferase family 2 Y592_02250 PF13180 PDZ domain Y592_02250 PF03572 Peptidase family S41 Y592_02270 PF01966 HD domain Y592_02275 PF04456 Protein of unknown function (DUF503) Y592_02280 PF00227 Proteasome subunit Y592_02285 PF01300 Telomere recombination Y592_02285 PF03481 Putative GTP-binding controlling metal-binding Y592_02295 PF00679 Elongation factor G C-terminus Y592_02295 PF06421 GTP-binding protein LepA C-terminus Y592_02295 PF03144 Elongation factor Tu domain 2 Y592_02295 PF00009 Elongation factor Tu GTP binding domain Y592_02300 PF08245 Mur ligase middle domain Y592_02300 PF02875 Mur ligase family, glutamate ligase domain Y592_02305 PF01134 Glucose inhibited division protein A Y592_02310 PF00551 Formyl transferase Y592_02310 PF02911 Formyl transferase, C-terminal domain Y592_02315 PF00398 Ribosomal RNA adenine dimethylase Y592_02325 PF02542 YgbB family Y592_02335 PF00132 Bacterial transferase hexapeptide (six repeats) Y592_02335 PF00483 Nucleotidyl transferase Y592_02340 PF00132 Bacterial transferase hexapeptide (six repeats) Y592_02340 PF00483 Nucleotidyl transferase Y592_02345 PF01791 DeoC/LacD family aldolase Y592_02350 PF01668 SmpB protein Y592_02355 PF02686 Glu-tRNAGln amidotransferase C subunit Y592_02360 PF02599 Global regulator protein family Y592_02365 PF02623 FliW protein Y592_02380 PF02734 DAK2 domain Y592_02380 PF13684 Dihydroxyacetone kinase family Y592_02390 PF02780 Transketolase, C-terminal domain Y592_02390 PF02779 Transketolase, pyrimidine binding domain Y592_02390 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Y592_02395 PF02403 Seryl-tRNA synthetase N-terminal domain Y592_02395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Y592_02400 PF01008 Initiation factor 2 subunit family Y592_02405 PF13145 PPIC-type PPIASE domain Y592_02410 PF09334 tRNA synthetases class I (M) Y592_02410 PF08264 Anticodon-binding domain of tRNA Y592_02410 PF13603 Leucyl-tRNA synthetase, Domain 2 Y592_02410 PF00133 tRNA synthetases class I (I, L, M and V) Y592_02415 PF04452 RNA methyltransferase Y592_02425 PF13302 Acetyltransferase (GNAT) domain Y592_02430 PF02163 Peptidase family M50 Y592_02430 PF17820 PDZ domain Y592_02435 PF00990 Diguanylate cyclase, GGDEF domain Y592_02445 PF04551 GcpE protein Y592_02460 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Y592_02465 PF01180 Dihydroorotate dehydrogenase Y592_02470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Y592_02475 PF00156 Phosphoribosyl transferase domain Y592_02500 PF16921 Tex protein YqgF-like domain Y592_02500 PF17674 HHH domain Y592_02500 PF00575 S1 RNA binding domain Y592_02500 PF09371 Tex-like protein N-terminal domain Y592_02505 PF01584 CheW-like domain Y592_02510 PF04851 Type III restriction enzyme, res subunit Y592_02510 PF18074 Primosomal protein N C-terminal domain Y592_02510 PF17764 3′ DNA-binding domain (3′BD) Y592_02510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Y592_02520 PF00313 'Cold-shock' DNA-binding domain Y592_02525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Y592_02530 PF03099 Biotin/lipoate A/B protein ligase family Y592_02550 PF02261 Aspartate decarboxylase Y592_02555 PF00989 PAS fold Y592_02555 PF00512 His Kinase A (phospho-acceptor) domain Y592_02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_02560 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Y592_02560 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Y592_02570 PF02645 Uncharacterised protein, DegV family COG1307 Y592_02575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Y592_02575 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Y592_02580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y592_02580 PF02874 ATP synthase alpha/beta family, beta-barrel domain Y592_02585 PF00231 ATP synthase Y592_02590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y592_02590 PF00306 ATP synthase alpha/beta chain, C terminal domain Y592_02590 PF02874 ATP synthase alpha/beta family, beta-barrel domain Y592_02595 PF00213 ATP synthase delta (OSCP) subunit Y592_02600 PF00430 ATP synthase B/B' CF(0) Y592_02605 PF00137 ATP synthase subunit C Y592_02610 PF00119 ATP synthase A chain Y592_02625 PF00557 Metallopeptidase family M24 Y592_02625 PF01321 Creatinase/Prolidase N-terminal domain Y592_02635 PF03652 Holliday junction resolvase Y592_02640 PF01368 DHH family Y592_02640 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Y592_02640 PF17768 RecJ OB domain Y592_02640 PF02272 DHHA1 domain Y592_02650 PF01430 Hsp33 protein Y592_02655 PF00672 HAMP domain Y592_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_02655 PF18698 Histidine kinase sensor domain Y592_02655 PF00512 His Kinase A (phospho-acceptor) domain Y592_02655 PF00989 PAS fold Y592_02660 PF01268 Formate--tetrahydrofolate ligase Y592_02665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Y592_02665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Y592_02670 PF00550 Phosphopantetheine attachment site Y592_02680 PF01230 HIT domain Y592_02685 PF00709 Adenylosuccinate synthetase Y592_02695 PF12706 Beta-lactamase superfamily domain Y592_02700 PF13941 MutL protein Y592_02710 PF00288 GHMP kinases N terminal domain Y592_02715 PF05362 Lon protease (S16) C-terminal proteolytic domain Y592_02715 PF13654 AAA domain Y592_02720 PF00579 tRNA synthetases class I (W and Y) Y592_02725 PF00924 Mechanosensitive ion channel Y592_02725 PF05552 Conserved TM helix Y592_02730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_02730 PF00672 HAMP domain Y592_02730 PF02743 Cache domain Y592_02745 PF00460 Flagella basal body rod protein Y592_02745 PF00460 Flagella basal body rod protein Y592_02745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y592_02745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y592_02750 PF00700 Bacterial flagellin C-terminal helical region Y592_02750 PF00669 Bacterial flagellin N-terminal helical region Y592_02760 PF00211 Adenylate and Guanylate cyclase catalytic domain Y592_02780 PF00072 Response regulator receiver domain Y592_02780 PF01966 HD domain Y592_02790 PF03315 Serine dehydratase beta chain Y592_02795 PF03313 Serine dehydratase alpha chain Y592_02805 PF09210 Domain of unknown function (DUF1957) Y592_02805 PF03065 Glycosyl hydrolase family 57 Y592_02810 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Y592_02820 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Y592_02820 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Y592_02825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Y592_02835 PF00953 Glycosyl transferase family 4 Y592_02870 PF00990 Diguanylate cyclase, GGDEF domain Y592_02875 PF07724 AAA domain (Cdc48 subfamily) Y592_02875 PF10431 C-terminal, D2-small domain, of ClpB protein Y592_02875 PF02861 Clp amino terminal domain, pathogenicity island component Y592_02875 PF17871 AAA lid domain Y592_02875 PF00004 ATPase family associated with various cellular activities (AAA) Y592_02880 PF00301 Rubredoxin Y592_02885 PF00753 Metallo-beta-lactamase superfamily Y592_02885 PF00301 Rubredoxin Y592_02885 PF00258 Flavodoxin Y592_02900 PF04286 Protein of unknown function (DUF445) Y592_02905 PF01479 S4 domain Y592_02905 PF00849 RNA pseudouridylate synthase Y592_02910 PF16363 GDP-mannose 4,6 dehydratase Y592_02915 PF12705 PD-(D/E)XK nuclease superfamily Y592_02915 PF00580 UvrD/REP helicase N-terminal domain Y592_02915 PF13361 UvrD-like helicase C-terminal domain Y592_02930 PF00216 Bacterial DNA-binding protein Y592_02935 PF01202 Shikimate kinase Y592_02940 PF01894 Uncharacterised protein family UPF0047 Y592_02950 PF01297 Zinc-uptake complex component A periplasmic Y592_02955 PF00005 ABC transporter Y592_02960 PF00950 ABC 3 transport family Y592_02970 PF01687 Riboflavin kinase Y592_02970 PF06574 FAD synthetase Y592_02975 PF00633 Helix-hairpin-helix motif Y592_02975 PF00730 HhH-GPD superfamily base excision DNA repair protein Y592_02975 PF10576 Iron-sulfur binding domain of endonuclease III Y592_02980 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Y592_02990 PF00860 Permease family Y592_03045 PF00005 ABC transporter Y592_03045 PF13732 Domain of unknown function (DUF4162) Y592_03060 PF08360 QacR-like protein, C-terminal region Y592_03060 PF00440 Bacterial regulatory proteins, tetR family Y592_03065 PF11896 Domain of unknown function (DUF3416) Y592_03065 PF00128 Alpha amylase, catalytic domain Y592_03070 PF00128 Alpha amylase, catalytic domain Y592_03070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Y592_03070 PF03714 Bacterial pullanase-associated domain Y592_03075 PF00486 Transcriptional regulatory protein, C terminal Y592_03075 PF00072 Response regulator receiver domain Y592_03080 PF00133 tRNA synthetases class I (I, L, M and V) Y592_03080 PF08264 Anticodon-binding domain of tRNA Y592_03080 PF06827 Zinc finger found in FPG and IleRS Y592_03090 PF00892 EamA-like transporter family Y592_03100 PF00460 Flagella basal body rod protein Y592_03100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y592_03105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y592_03105 PF00460 Flagella basal body rod protein Y592_03110 PF00005 ABC transporter Y592_03125 PF01380 SIS domain Y592_03130 PF02504 Fatty acid synthesis protein Y592_03135 PF01783 Ribosomal L32p protein family Y592_03155 PF14841 FliG middle domain Y592_03155 PF01706 FliG C-terminal domain Y592_03155 PF14842 FliG N-terminal domain Y592_03160 PF14480 DNA polymerase III polC-type N-terminus I Y592_03160 PF11490 DNA polymerase III polC-type N-terminus II Y592_03160 PF07733 Bacterial DNA polymerase III alpha NTPase domain Y592_03160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Y592_03160 PF02811 PHP domain Y592_03160 PF00929 Exonuclease Y592_03165 PF13638 PIN domain Y592_03165 PF02562 PhoH-like protein Y592_03175 PF13514 AAA domain Y592_03180 PF00696 Amino acid kinase family Y592_03185 PF01926 50S ribosome-binding GTPase Y592_03190 PF13690 Chemotaxis phosphatase CheX Y592_03195 PF01048 Phosphorylase superfamily Y592_03200 PF07478 D-ala D-ala ligase C-terminus Y592_03200 PF01820 D-ala D-ala ligase N-terminus Y592_03205 PF12697 Alpha/beta hydrolase family Y592_03210 PF02875 Mur ligase family, glutamate ligase domain Y592_03210 PF01225 Mur ligase family, catalytic domain Y592_03210 PF08245 Mur ligase middle domain Y592_03215 PF02629 CoA binding domain Y592_03215 PF06971 Putative DNA-binding protein N-terminus Y592_03220 PF02906 Iron only hydrogenase large subunit, C-terminal domain Y592_03220 PF02256 Iron hydrogenase small subunit Y592_03220 PF00037 4Fe-4S binding domain Y592_03220 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Y592_03225 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Y592_03225 PF00037 4Fe-4S binding domain Y592_03225 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Y592_03270 PF01926 50S ribosome-binding GTPase Y592_03270 PF01018 GTP1/OBG Y592_03270 PF09269 Domain of unknown function (DUF1967) Y592_03275 PF01467 Cytidylyltransferase-like Y592_03280 PF01207 Dihydrouridine synthase (Dus) Y592_03290 PF00155 Aminotransferase class I and II Y592_03295 PF04029 2-phosphosulpholactate phosphatase Y592_03305 PF00905 Penicillin binding protein transpeptidase domain Y592_03305 PF00912 Transglycosylase Y592_03305 PF14814 Bifunctional transglycosylase second domain Y592_03315 PF00334 Nucleoside diphosphate kinase Y592_03325 PF09967 VWA-like domain (DUF2201) Y592_03325 PF13203 Putative metallopeptidase domain Y592_03335 PF02769 AIR synthase related protein, C-terminal domain Y592_03335 PF00586 AIR synthase related protein, N-terminal domain Y592_03340 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Y592_03340 PF02843 Phosphoribosylglycinamide synthetase, C domain Y592_03340 PF02844 Phosphoribosylglycinamide synthetase, N domain Y592_03345 PF02142 MGS-like domain Y592_03345 PF01808 AICARFT/IMPCHase bienzyme Y592_03350 PF00551 Formyl transferase Y592_03355 PF00156 Phosphoribosyl transferase domain Y592_03360 PF00753 Metallo-beta-lactamase superfamily Y592_03370 PF00664 ABC transporter transmembrane region Y592_03370 PF00005 ABC transporter Y592_03380 PF00069 Protein kinase domain Y592_03415 PF00664 ABC transporter transmembrane region Y592_03415 PF00005 ABC transporter Y592_03445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_03460 PF00528 Binding-protein-dependent transport system inner membrane component Y592_03465 PF14785 Maltose transport system permease protein MalF P2 domain Y592_03465 PF00528 Binding-protein-dependent transport system inner membrane component Y592_03470 PF01547 Bacterial extracellular solute-binding protein Y592_03475 PF01979 Amidohydrolase family Y592_03485 PF00072 Response regulator receiver domain Y592_03485 PF01966 HD domain Y592_03490 PF01458 Uncharacterized protein family (UPF0051) Y592_03495 PF00005 ABC transporter Y592_03495 PF12399 Branched-chain amino acid ATP-binding cassette transporter Y592_03540 PF00294 pfkB family carbohydrate kinase Y592_03545 PF00356 Bacterial regulatory proteins, lacI family Y592_03550 PF13407 Periplasmic binding protein domain Y592_03555 PF02653 Branched-chain amino acid transport system / permease component Y592_03560 PF00005 ABC transporter Y592_03565 PF05025 RbsD / FucU transport protein family Y592_03590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Y592_03590 PF13378 Enolase C-terminal domain-like Y592_03600 PF00128 Alpha amylase, catalytic domain Y592_03600 PF00686 Starch binding domain Y592_03620 PF13597 Anaerobic ribonucleoside-triphosphate reductase Y592_03620 PF03477 ATP cone domain Y592_03630 PF02867 Ribonucleotide reductase, barrel domain Y592_03630 PF03477 ATP cone domain Y592_03630 PF00317 Ribonucleotide reductase, all-alpha domain Y592_03670 PF00565 Staphylococcal nuclease homologue Y592_03690 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y592_03690 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y592_03700 PF04324 BFD-like [2Fe-2S] binding domain Y592_03700 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_03705 PF01266 FAD dependent oxidoreductase Y592_03710 PF00990 Diguanylate cyclase, GGDEF domain Y592_03710 PF00072 Response regulator receiver domain Y592_03715 PF00700 Bacterial flagellin C-terminal helical region Y592_03715 PF00669 Bacterial flagellin N-terminal helical region Y592_03740 PF06689 ClpX C4-type zinc finger Y592_03740 PF07724 AAA domain (Cdc48 subfamily) Y592_03740 PF10431 C-terminal, D2-small domain, of ClpB protein Y592_03745 PF00814 Glycoprotease family Y592_03750 PF00571 CBS domain Y592_03750 PF00478 IMP dehydrogenase / GMP reductase domain Y592_03755 PF01145 SPFH domain / Band 7 family Y592_03760 PF01145 SPFH domain / Band 7 family Y592_03765 PF02915 Rubrerythrin Y592_03770 PF02092 Glycyl-tRNA synthetase beta subunit Y592_03770 PF05746 DALR anticodon binding domain Y592_03775 PF02091 Glycyl-tRNA synthetase alpha subunit Y592_03785 PF01098 Cell cycle protein Y592_03800 PF01250 Ribosomal protein S6 Y592_03805 PF00436 Single-strand binding protein family Y592_03810 PF01084 Ribosomal protein S18 Y592_03825 PF00471 Ribosomal protein L33 Y592_03835 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Y592_03840 PF18298 NusG additional domain Y592_03840 PF00467 KOW motif Y592_03840 PF02357 Transcription termination factor nusG Y592_03845 PF00298 Ribosomal protein L11, RNA binding domain Y592_03845 PF03946 Ribosomal protein L11, N-terminal domain Y592_03850 PF00687 Ribosomal protein L1p/L10e family Y592_03875 PF00990 Diguanylate cyclase, GGDEF domain Y592_03885 PF00186 Dihydrofolate reductase Y592_03895 PF00111 2Fe-2S iron-sulfur cluster binding domain Y592_03895 PF00970 Oxidoreductase FAD-binding domain Y592_03895 PF00175 Oxidoreductase NAD-binding domain Y592_03900 PF02508 Rnf-Nqr subunit, membrane protein Y592_03905 PF02508 Rnf-Nqr subunit, membrane protein Y592_03910 PF04205 FMN-binding domain Y592_03915 PF03116 NQR2, RnfD, RnfE family Y592_03920 PF00483 Nucleotidyl transferase Y592_03920 PF01050 Mannose-6-phosphate isomerase Y592_03925 PF02706 Chain length determinant protein Y592_03925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Y592_03925 PF13807 G-rich domain on putative tyrosine kinase Y592_03930 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Y592_03930 PF10531 SLBB domain Y592_03930 PF02563 Polysaccharide biosynthesis/export protein Y592_03940 PF02811 PHP domain Y592_03945 PF01225 Mur ligase family, catalytic domain Y592_03945 PF02875 Mur ligase family, glutamate ligase domain Y592_03945 PF08245 Mur ligase middle domain Y592_03955 PF00953 Glycosyl transferase family 4 Y592_03960 PF00953 Glycosyl transferase family 4 Y592_03975 PF02119 Flagellar P-ring protein Y592_03980 PF02107 Flagellar L-ring protein Y592_03985 PF13144 Chaperone for flagella basal body P-ring formation Y592_03990 PF01751 Toprim domain Y592_03990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_03990 PF00986 DNA gyrase B subunit, carboxyl terminus Y592_03990 PF00204 DNA gyrase B Y592_04000 PF01063 Amino-transferase class IV Y592_04005 PF00919 Uncharacterized protein family UPF0004 Y592_04005 PF04055 Radical SAM superfamily Y592_04010 PF00571 CBS domain Y592_04010 PF00478 IMP dehydrogenase / GMP reductase domain Y592_04015 PF00294 pfkB family carbohydrate kinase Y592_04020 PF00005 ABC transporter Y592_04020 PF00664 ABC transporter transmembrane region Y592_04060 PF00132 Bacterial transferase hexapeptide (six repeats) Y592_04075 PF08011 PD-(D/E)XK nuclease superfamily Y592_04075 PF09820 Predicted AAA-ATPase Y592_04200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Y592_04205 PF01370 NAD dependent epimerase/dehydratase family Y592_04210 PF16363 GDP-mannose 4,6 dehydratase Y592_04220 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Y592_04220 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Y592_04220 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Y592_04235 PF13439 Glycosyltransferase Family 4 Y592_04235 PF00534 Glycosyl transferases group 1 Y592_04245 PF02350 UDP-N-acetylglucosamine 2-epimerase Y592_04250 PF01370 NAD dependent epimerase/dehydratase family Y592_04255 PF02719 Polysaccharide biosynthesis protein Y592_04255 PF08485 Polysaccharide biosynthesis protein C-terminal Y592_04260 PF13579 Glycosyl transferase 4-like domain Y592_04265 PF02397 Bacterial sugar transferase Y592_04320 PF09820 Predicted AAA-ATPase Y592_04320 PF08011 PD-(D/E)XK nuclease superfamily Y592_04340 PF08011 PD-(D/E)XK nuclease superfamily Y592_04340 PF09820 Predicted AAA-ATPase Y592_04345 PF16491 CAAX prenyl protease N-terminal, five membrane helices Y592_04345 PF01435 Peptidase family M48 Y592_04365 PF00990 Diguanylate cyclase, GGDEF domain Y592_04375 PF13932 GidA associated domain Y592_04375 PF01134 Glucose inhibited division protein A Y592_04380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y592_04380 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_04385 PF03749 Sugar fermentation stimulation protein RE domain Y592_04385 PF17746 SfsA N-terminal OB domain Y592_04400 PF01022 Bacterial regulatory protein, arsR family Y592_04405 PF01554 MatE Y592_04410 PF16326 ABC transporter C-terminal domain Y592_04410 PF12848 ABC transporter Y592_04410 PF00005 ABC transporter Y592_04420 PF10609 NUBPL iron-transfer P-loop NTPase Y592_04430 PF01975 Survival protein SurE Y592_04435 PF01327 Polypeptide deformylase Y592_04440 PF00271 Helicase conserved C-terminal domain Y592_04440 PF00270 DEAD/DEAH box helicase Y592_04450 PF00005 ABC transporter Y592_04450 PF12399 Branched-chain amino acid ATP-binding cassette transporter Y592_04465 PF00486 Transcriptional regulatory protein, C terminal Y592_04465 PF00072 Response regulator receiver domain Y592_04475 PF01132 Elongation factor P (EF-P) OB domain Y592_04475 PF09285 Elongation factor P, C-terminal Y592_04475 PF08207 Elongation factor P (EF-P) KOW-like domain Y592_04485 PF01029 NusB family Y592_04495 PF01312 FlhB HrpN YscU SpaS Family Y592_04500 PF01311 Bacterial export proteins, family 1 Y592_04505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_04510 PF01048 Phosphorylase superfamily Y592_04515 PF06130 Phosphate propanoyltransferase Y592_04520 PF09269 Domain of unknown function (DUF1967) Y592_04520 PF01926 50S ribosome-binding GTPase Y592_04520 PF01018 GTP1/OBG Y592_04525 PF03600 Citrate transporter Y592_04540 PF01384 Phosphate transporter family Y592_04545 PF01384 Phosphate transporter family Y592_04550 PF01865 Protein of unknown function DUF47 Y592_04570 PF00889 Elongation factor TS Y592_04575 PF02811 PHP domain Y592_04580 PF06418 CTP synthase N-terminus Y592_04580 PF00117 Glutamine amidotransferase class-I Y592_04585 PF00994 Probable molybdopterin binding domain Y592_04585 PF02464 Competence-damaged protein Y592_04585 PF18146 Damage-inducible protein CinA KH domain Y592_04590 PF00356 Bacterial regulatory proteins, lacI family Y592_04605 PF13361 UvrD-like helicase C-terminal domain Y592_04605 PF00580 UvrD/REP helicase N-terminal domain Y592_04615 PF04542 Sigma-70 region 2 Y592_04615 PF08281 Sigma-70, region 4 Y592_04630 PF00919 Uncharacterized protein family UPF0004 Y592_04630 PF18693 TRAM domain Y592_04630 PF04055 Radical SAM superfamily Y592_04635 PF00563 EAL domain Y592_04635 PF00990 Diguanylate cyclase, GGDEF domain Y592_04635 PF03707 Bacterial signalling protein N terminal repeat Y592_04650 PF09178 Domain of unknown function (DUF1945) Y592_04650 PF00128 Alpha amylase, catalytic domain Y592_04655 PF08676 MutL C terminal dimerisation domain Y592_04655 PF01119 DNA mismatch repair protein, C-terminal domain Y592_04670 PF00356 Bacterial regulatory proteins, lacI family Y592_04675 PF00291 Pyridoxal-phosphate dependent enzyme Y592_04690 PF01470 Pyroglutamyl peptidase Y592_04695 PF02567 Phenazine biosynthesis-like protein Y592_04700 PF00578 AhpC/TSA family Y592_04710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y592_04710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y592_04710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y592_04710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y592_04725 PF03063 Prismane/CO dehydrogenase family Y592_04730 PF13416 Bacterial extracellular solute-binding protein Y592_04735 PF00528 Binding-protein-dependent transport system inner membrane component Y592_04740 PF00528 Binding-protein-dependent transport system inner membrane component Y592_04750 PF00990 Diguanylate cyclase, GGDEF domain Y592_04750 PF03707 Bacterial signalling protein N terminal repeat Y592_04750 PF00563 EAL domain Y592_04755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_04755 PF00672 HAMP domain Y592_04755 PF02743 Cache domain Y592_04765 PF00483 Nucleotidyl transferase Y592_04780 PF13393 Histidyl-tRNA synthetase Y592_04780 PF03129 Anticodon binding domain Y592_04790 PF00072 Response regulator receiver domain Y592_04790 PF08279 HTH domain Y592_04800 PF00005 ABC transporter Y592_04810 PF00578 AhpC/TSA family Y592_04815 PF00128 Alpha amylase, catalytic domain Y592_04825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_04825 PF00672 HAMP domain Y592_04830 PF02574 Homocysteine S-methyltransferase Y592_04830 PF00809 Pterin binding enzyme Y592_04830 PF02965 Vitamin B12 dependent methionine synthase, activation domain Y592_04830 PF02607 B12 binding domain Y592_04830 PF02310 B12 binding domain Y592_04835 PF01381 Helix-turn-helix Y592_04850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_04850 PF00672 HAMP domain Y592_04850 PF02743 Cache domain Y592_04855 PF00877 NlpC/P60 family Y592_04875 PF04011 LemA family Y592_04880 PF02540 NAD synthase Y592_04880 PF00958 GMP synthase C terminal domain Y592_04880 PF00117 Glutamine amidotransferase class-I Y592_04890 PF02277 Phosphoribosyltransferase Y592_04895 PF01979 Amidohydrolase family Y592_04905 PF00528 Binding-protein-dependent transport system inner membrane component Y592_04910 PF00528 Binding-protein-dependent transport system inner membrane component Y592_04915 PF01547 Bacterial extracellular solute-binding protein Y592_04920 PF00933 Glycosyl hydrolase family 3 N terminal domain Y592_04920 PF01915 Glycosyl hydrolase family 3 C-terminal domain Y592_04930 PF07963 Prokaryotic N-terminal methylation motif Y592_04930 PF00114 Pilin (bacterial filament) Y592_04935 PF00464 Serine hydroxymethyltransferase Y592_04945 PF00403 Heavy-metal-associated domain Y592_04990 PF00534 Glycosyl transferases group 1 Y592_04990 PF13439 Glycosyltransferase Family 4 Y592_05005 PF02350 UDP-N-acetylglucosamine 2-epimerase Y592_05015 PF00072 Response regulator receiver domain Y592_05015 PF00990 Diguanylate cyclase, GGDEF domain Y592_05020 PF00528 Binding-protein-dependent transport system inner membrane component Y592_05025 PF00528 Binding-protein-dependent transport system inner membrane component Y592_05040 PF02350 UDP-N-acetylglucosamine 2-epimerase Y592_05060 PF02660 Glycerol-3-phosphate acyltransferase Y592_05080 PF03147 Ferredoxin-fold anticodon binding domain Y592_05080 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Y592_05080 PF01588 Putative tRNA binding domain Y592_05080 PF03484 tRNA synthetase B5 domain Y592_05080 PF03483 B3/4 domain Y592_05085 PF01926 50S ribosome-binding GTPase Y592_05085 PF07650 KH domain Y592_05090 PF00465 Iron-containing alcohol dehydrogenase Y592_05095 PF00365 Phosphofructokinase Y592_05105 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Y592_05110 PF00128 Alpha amylase, catalytic domain Y592_05110 PF02806 Alpha amylase, C-terminal all-beta domain Y592_05110 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Y592_05115 PF00990 Diguanylate cyclase, GGDEF domain Y592_05130 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Y592_05140 PF02654 Cobalamin-5-phosphate synthase Y592_05145 PF07685 CobB/CobQ-like glutamine amidotransferase domain Y592_05150 PF03186 CobD/Cbib protein Y592_05155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Y592_05155 PF00155 Aminotransferase class I and II Y592_05155 PF07685 CobB/CobQ-like glutamine amidotransferase domain Y592_05160 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Y592_05165 PF00082 Subtilase family Y592_05170 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Y592_05175 PF00849 RNA pseudouridylate synthase Y592_05175 PF01479 S4 domain Y592_05180 PF00809 Pterin binding enzyme Y592_05185 PF12146 Serine aminopeptidase, S33 Y592_05195 PF01139 tRNA-splicing ligase RtcB Y592_05200 PF00005 ABC transporter Y592_05240 PF01594 AI-2E family transporter Y592_05245 PF00710 Asparaginase, N-terminal Y592_05245 PF17763 Glutaminase/Asparaginase C-terminal domain Y592_05275 PF02463 RecF/RecN/SMC N terminal domain Y592_05275 PF06470 SMC proteins Flexible Hinge Domain Y592_05280 PF08245 Mur ligase middle domain Y592_05280 PF02875 Mur ligase family, glutamate ligase domain Y592_05280 PF01225 Mur ligase family, catalytic domain Y592_05285 PF04101 Glycosyltransferase family 28 C-terminal domain Y592_05285 PF03033 Glycosyltransferase family 28 N-terminal domain Y592_05290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Y592_05290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Y592_05335 PF13087 AAA domain Y592_05335 PF13195 Protein of unknown function (DUF4011) Y592_05335 PF13086 AAA domain Y592_05345 PF01113 Dihydrodipicolinate reductase, N-terminus Y592_05355 PF00291 Pyridoxal-phosphate dependent enzyme Y592_05360 PF16552 D-ornithine 4,5-aminomutase alpha-subunit Y592_05365 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit Y592_05365 PF02310 B12 binding domain Y592_05365 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase Y592_05370 PF01026 TatD related DNase Y592_05375 PF01330 RuvA N terminal domain Y592_05375 PF07499 RuvA, C-terminal domain Y592_05405 PF02272 DHHA1 domain Y592_05405 PF01411 tRNA synthetases class II (A) Y592_05405 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Y592_05415 PF01425 Amidase Y592_05420 PF02637 GatB domain Y592_05420 PF02934 GatB/GatE catalytic domain Y592_05430 PF04055 Radical SAM superfamily Y592_05430 PF06969 HemN C-terminal domain Y592_05435 PF01098 Cell cycle protein Y592_05445 PF00990 Diguanylate cyclase, GGDEF domain Y592_05445 PF08448 PAS fold Y592_05450 PF01416 tRNA pseudouridine synthase Y592_05460 PF01728 FtsJ-like methyltransferase Y592_05460 PF01479 S4 domain Y592_05470 PF01627 Hpt domain Y592_05470 PF07194 P2 response regulator binding domain Y592_05470 PF02895 Signal transducing histidine kinase, homodimeric domain Y592_05470 PF01584 CheW-like domain Y592_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_05475 PF01584 CheW-like domain Y592_05480 PF00072 Response regulator receiver domain Y592_05490 PF00813 FliP family Y592_05495 PF01313 Bacterial export proteins, family 3 Y592_05500 PF02223 Thymidylate kinase Y592_05505 PF00318 Ribosomal protein S2 Y592_05510 PF00453 Ribosomal protein L20 Y592_05515 PF01632 Ribosomal protein L35 Y592_05520 PF05198 Translation initiation factor IF-3, N-terminal domain Y592_05520 PF00707 Translation initiation factor IF-3, C-terminal domain Y592_05540 PF02887 Pyruvate kinase, alpha/beta domain Y592_05540 PF00224 Pyruvate kinase, barrel domain Y592_05555 PF01479 S4 domain Y592_05555 PF00849 RNA pseudouridylate synthase Y592_05570 PF00164 Ribosomal protein S12/S23 Y592_05575 PF00177 Ribosomal protein S7p/S5e Y592_05580 PF14492 Elongation Factor G, domain II Y592_05580 PF03144 Elongation factor Tu domain 2 Y592_05580 PF00009 Elongation factor Tu GTP binding domain Y592_05580 PF03764 Elongation factor G, domain IV Y592_05580 PF00679 Elongation factor G C-terminus Y592_05585 PF03143 Elongation factor Tu C-terminal domain Y592_05585 PF00009 Elongation factor Tu GTP binding domain Y592_05585 PF03144 Elongation factor Tu domain 2 Y592_05590 PF00338 Ribosomal protein S10p/S20e Y592_05595 PF00297 Ribosomal protein L3 Y592_05600 PF00573 Ribosomal protein L4/L1 family Y592_05605 PF00276 Ribosomal protein L23 Y592_05610 PF03947 Ribosomal Proteins L2, C-terminal domain Y592_05610 PF00181 Ribosomal Proteins L2, RNA binding domain Y592_05615 PF00203 Ribosomal protein S19 Y592_05620 PF00237 Ribosomal protein L22p/L17e Y592_05625 PF07650 KH domain Y592_05625 PF00189 Ribosomal protein S3, C-terminal domain Y592_05630 PF00252 Ribosomal protein L16p/L10e Y592_05635 PF00831 Ribosomal L29 protein Y592_05640 PF00366 Ribosomal protein S17 Y592_05645 PF00238 Ribosomal protein L14p/L23e Y592_05650 PF00467 KOW motif Y592_05650 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Y592_05655 PF00281 Ribosomal protein L5 Y592_05655 PF00673 ribosomal L5P family C-terminus Y592_05660 PF00253 Ribosomal protein S14p/S29e Y592_05665 PF00410 Ribosomal protein S8 Y592_05670 PF00347 Ribosomal protein L6 Y592_05675 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Y592_05680 PF00333 Ribosomal protein S5, N-terminal domain Y592_05680 PF03719 Ribosomal protein S5, C-terminal domain Y592_05685 PF00327 Ribosomal protein L30p/L7e Y592_05690 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Y592_05695 PF00344 SecY translocase Y592_05700 PF05191 Adenylate kinase, active site lid Y592_05705 PF00557 Metallopeptidase family M24 Y592_05710 PF01176 Translation initiation factor 1A / IF-1 Y592_05715 PF00444 Ribosomal protein L36 Y592_05720 PF00416 Ribosomal protein S13/S18 Y592_05725 PF00411 Ribosomal protein S11 Y592_05730 PF00163 Ribosomal protein S4/S9 N-terminal domain Y592_05730 PF01479 S4 domain Y592_05735 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Y592_05735 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Y592_05735 PF01000 RNA polymerase Rpb3/RpoA insert domain Y592_05740 PF01196 Ribosomal protein L17 Y592_05745 PF05697 Bacterial trigger factor protein (TF) Y592_05745 PF05698 Bacterial trigger factor protein (TF) C-terminus Y592_05750 PF00574 Clp protease Y592_05755 PF01709 Transcriptional regulator Y592_05765 PF01739 CheR methyltransferase, SAM binding domain Y592_05765 PF03705 CheR methyltransferase, all-alpha domain Y592_05775 PF01479 S4 domain Y592_05775 PF00849 RNA pseudouridylate synthase Y592_05780 PF00120 Glutamine synthetase, catalytic domain Y592_05780 PF03951 Glutamine synthetase, beta-Grasp domain Y592_05785 PF03537 Glycoside-hydrolase family GH114 Y592_05825 PF01966 HD domain Y592_05835 PF00814 Glycoprotease family Y592_05840 PF05192 MutS domain III Y592_05840 PF05188 MutS domain II Y592_05840 PF01624 MutS domain I Y592_05840 PF05190 MutS family domain IV Y592_05840 PF00488 MutS domain V Y592_05845 PF00072 Response regulator receiver domain Y592_05845 PF01966 HD domain Y592_05850 PF01871 AMMECR1 Y592_05865 PF01171 PP-loop family Y592_05870 PF03313 Serine dehydratase alpha chain Y592_05880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Y592_05880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Y592_05905 PF05233 PHB accumulation regulatory domain Y592_05905 PF07879 PHB/PHA accumulation regulator DNA-binding domain Y592_05920 PF01131 DNA topoisomerase Y592_05920 PF01751 Toprim domain Y592_05925 PF01966 HD domain Y592_05925 PF01336 OB-fold nucleic acid binding domain Y592_05930 PF01168 Alanine racemase, N-terminal domain Y592_05930 PF00842 Alanine racemase, C-terminal domain Y592_05940 PF00830 Ribosomal L28 family Y592_05950 PF00140 Sigma-70 factor, region 1.2 Y592_05950 PF03979 Sigma-70 factor, region 1.1 Y592_05950 PF04539 Sigma-70 region 3 Y592_05950 PF04545 Sigma-70, region 4 Y592_05950 PF04542 Sigma-70 region 2 Y592_05955 PF01807 CHC2 zinc finger Y592_05955 PF08275 DNA primase catalytic core, N-terminal domain Y592_05960 PF00380 Ribosomal protein S9/S16 Y592_05965 PF00572 Ribosomal protein L13 Y592_05970 PF12822 ECF transporter, substrate-specific component Y592_05975 PF01016 Ribosomal L27 protein Y592_05980 PF04327 Cysteine protease Prp Y592_05985 PF00829 Ribosomal prokaryotic L21 protein Y592_06000 PF02075 Crossover junction endodeoxyribonuclease RuvC Y592_06005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Y592_06005 PF07733 Bacterial DNA polymerase III alpha NTPase domain Y592_06005 PF00929 Exonuclease Y592_06005 PF02811 PHP domain Y592_06005 PF14579 Helix-hairpin-helix motif Y592_06010 PF04232 Stage V sporulation protein S (SpoVS) Y592_06020 PF07136 Protein of unknown function (DUF1385) Y592_06025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Y592_06025 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Y592_06030 PF07687 Peptidase dimerisation domain Y592_06030 PF01546 Peptidase family M20/M25/M40 Y592_06035 PF01409 tRNA synthetases class II core domain (F) Y592_06035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Y592_06040 PF16198 tRNA pseudouridylate synthase B C-terminal domain Y592_06040 PF01509 TruB family pseudouridylate synthase (N terminal domain) Y592_06045 PF06071 Protein of unknown function (DUF933) Y592_06045 PF01926 50S ribosome-binding GTPase Y592_06050 PF04025 Domain of unknown function (DUF370) Y592_06055 PF04055 Radical SAM superfamily Y592_06055 PF01938 TRAM domain Y592_06055 PF00919 Uncharacterized protein family UPF0004 Y592_06060 PF00795 Carbon-nitrogen hydrolase Y592_06065 PF02535 ZIP Zinc transporter Y592_06070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Y592_06070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Y592_06080 PF11849 Domain of unknown function (DUF3369) Y592_06095 PF01979 Amidohydrolase family Y592_06100 PF05000 RNA polymerase Rpb1, domain 4 Y592_06100 PF04983 RNA polymerase Rpb1, domain 3 Y592_06100 PF00623 RNA polymerase Rpb1, domain 2 Y592_06100 PF04998 RNA polymerase Rpb1, domain 5 Y592_06100 PF04997 RNA polymerase Rpb1, domain 1 Y592_06105 PF00562 RNA polymerase Rpb2, domain 6 Y592_06105 PF04563 RNA polymerase beta subunit Y592_06105 PF04565 RNA polymerase Rpb2, domain 3 Y592_06105 PF04561 RNA polymerase Rpb2, domain 2 Y592_06105 PF10385 RNA polymerase beta subunit external 1 domain Y592_06105 PF04560 RNA polymerase Rpb2, domain 7 Y592_06110 PF16320 Ribosomal protein L7/L12 dimerisation domain Y592_06110 PF00542 Ribosomal protein L7/L12 C-terminal domain Y592_06115 PF00466 Ribosomal protein L10 Y592_06120 PF00700 Bacterial flagellin C-terminal helical region Y592_06120 PF00669 Bacterial flagellin N-terminal helical region Y592_06130 PF01467 Cytidylyltransferase-like Y592_06135 PF00772 DnaB-like helicase N terminal domain Y592_06135 PF03796 DnaB-like helicase C terminal domain Y592_06145 PF01042 Endoribonuclease L-PSP Y592_06160 PF02142 MGS-like domain Y592_06175 PF00152 tRNA synthetases class II (D, K and N) Y592_06175 PF01336 OB-fold nucleic acid binding domain Y592_06180 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Y592_06195 PF02649 Type I GTP cyclohydrolase folE2 Y592_06205 PF00534 Glycosyl transferases group 1 Y592_06205 PF00862 Sucrose synthase Y592_06210 PF00294 pfkB family carbohydrate kinase Y592_06215 PF02768 DNA polymerase III beta subunit, C-terminal domain Y592_06215 PF02767 DNA polymerase III beta subunit, central domain Y592_06215 PF00712 DNA polymerase III beta subunit, N-terminal domain Y592_06220 PF00114 Pilin (bacterial filament) Y592_06220 PF07963 Prokaryotic N-terminal methylation motif Y592_06225 PF00005 ABC transporter Y592_06235 PF00669 Bacterial flagellin N-terminal helical region Y592_06235 PF00700 Bacterial flagellin C-terminal helical region Y592_06270 PF01476 LysM domain Y592_06270 PF03734 L,D-transpeptidase catalytic domain Y592_06280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Y592_06280 PF00128 Alpha amylase, catalytic domain Y592_06290 PF02683 Cytochrome C biogenesis protein transmembrane region Y592_06305 PF00462 Glutaredoxin Y592_06310 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_06315 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_06315 PF13192 Thioredoxin domain Y592_06325 PF00293 NUDIX domain Y592_06335 PF02561 Flagellar protein FliS Y592_06350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_06350 PF00005 ABC transporter Y592_06355 PF00005 ABC transporter Y592_06355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_06360 PF12911 N-terminal TM domain of oligopeptide transport permease C Y592_06360 PF00528 Binding-protein-dependent transport system inner membrane component Y592_06365 PF00528 Binding-protein-dependent transport system inner membrane component Y592_06370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y592_06380 PF00528 Binding-protein-dependent transport system inner membrane component Y592_06385 PF00528 Binding-protein-dependent transport system inner membrane component Y592_06390 PF08402 TOBE domain Y592_06390 PF00005 ABC transporter Y592_06395 PF13416 Bacterial extracellular solute-binding protein Y592_06400 PF17284 Spermidine synthase tetramerisation domain Y592_06405 PF02675 S-adenosylmethionine decarboxylase Y592_06415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y592_06415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y592_06415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y592_06415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y592_06425 PF04474 Protein of unknown function (DUF554) Y592_06430 PF02130 Uncharacterized protein family UPF0054 Y592_06435 PF07697 7TM-HD extracellular Y592_06435 PF07698 7TM receptor with intracellular HD hydrolase Y592_06435 PF01966 HD domain Y592_06440 PF02562 PhoH-like protein Y592_06450 PF02310 B12 binding domain Y592_06455 PF00682 HMGL-like Y592_06455 PF02436 Conserved carboxylase domain Y592_06455 PF00364 Biotin-requiring enzyme Y592_06465 PF01039 Carboxyl transferase domain Y592_06485 PF07517 SecA DEAD-like domain Y592_06485 PF07516 SecA Wing and Scaffold domain Y592_06485 PF01043 SecA preprotein cross-linking domain Y592_06490 PF03775 Septum formation inhibitor MinC, C-terminal domain Y592_06515 PF00149 Calcineurin-like phosphoesterase Y592_06525 PF00460 Flagella basal body rod protein Y592_06530 PF00460 Flagella basal body rod protein Y592_06530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y592_06535 PF02049 Flagellar hook-basal body complex protein FliE Y592_06540 PF00011 Hsp20/alpha crystallin family Y592_06545 PF00012 Hsp70 protein Y592_06550 PF01906 Putative heavy-metal-binding Y592_06555 PF13026 Protein of unknown function (DUF3887) Y592_06555 PF12146 Serine aminopeptidase, S33 Y592_06565 PF00005 ABC transporter Y592_06570 PF00392 Bacterial regulatory proteins, gntR family Y592_06580 PF01144 Coenzyme A transferase Y592_06585 PF01144 Coenzyme A transferase Y592_06590 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_06590 PF13247 4Fe-4S dicluster domain Y592_06590 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Y592_06595 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Y592_06595 PF00970 Oxidoreductase FAD-binding domain Y592_06595 PF00175 Oxidoreductase NAD-binding domain Y592_06605 PF00480 ROK family Y592_06625 PF00072 Response regulator receiver domain Y592_06625 PF01339 CheB methylesterase Y592_06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_06630 PF01627 Hpt domain Y592_06630 PF01584 CheW-like domain Y592_06630 PF00072 Response regulator receiver domain Y592_06665 PF18693 TRAM domain Y592_06665 PF00919 Uncharacterized protein family UPF0004 Y592_06665 PF04055 Radical SAM superfamily Y592_06670 PF01066 CDP-alcohol phosphatidyltransferase Y592_06680 PF00154 recA bacterial DNA recombination protein Y592_06685 PF02631 RecX family Y592_06690 PF12072 Domain of unknown function (DUF3552) Y592_06690 PF01966 HD domain Y592_06690 PF00013 KH domain Y592_06695 PF17912 MalK OB fold domain Y592_06695 PF00005 ABC transporter Y592_06695 PF03459 TOBE domain Y592_06710 PF08362 YcdC-like protein, C-terminal region Y592_06710 PF00440 Bacterial regulatory proteins, tetR family Y592_06715 PF01197 Ribosomal protein L31 Y592_06720 PF00575 S1 RNA binding domain Y592_06725 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Y592_06725 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Y592_06725 PF00037 4Fe-4S binding domain Y592_06735 PF00037 4Fe-4S binding domain Y592_06735 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Y592_06735 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Y592_06750 PF02971 Formiminotransferase domain Y592_06750 PF07837 Formiminotransferase domain, N-terminal subdomain Y592_06755 PF00459 Inositol monophosphatase family Y592_06760 PF00905 Penicillin binding protein transpeptidase domain Y592_06760 PF03717 Penicillin-binding Protein dimerisation domain Y592_06765 PF00749 tRNA synthetases class I (E and Q), catalytic domain Y592_06785 PF09424 Yqey-like protein Y592_06790 PF00850 Histone deacetylase domain Y592_06795 PF02502 Ribose/Galactose Isomerase Y592_06800 PF01740 STAS domain Y592_06805 PF00717 Peptidase S24-like Y592_06805 PF01726 LexA DNA binding domain Y592_06810 PF01951 Archease protein family (MTH1598/TM1083) Y592_06815 PF03989 DNA gyrase C-terminal domain, beta-propeller Y592_06815 PF00521 DNA gyrase/topoisomerase IV, subunit A Y592_06820 PF08264 Anticodon-binding domain of tRNA Y592_06820 PF01588 Putative tRNA binding domain Y592_06820 PF09334 tRNA synthetases class I (M) Y592_06825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y592_06840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_06840 PF00005 ABC transporter Y592_06845 PF00005 ABC transporter Y592_06845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_06850 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Y592_06850 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Y592_06850 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Y592_06850 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Y592_06855 PF01966 HD domain Y592_06860 PF01475 Ferric uptake regulator family Y592_06865 PF10417 C-terminal domain of 1-Cys peroxiredoxin Y592_06865 PF00578 AhpC/TSA family Y592_06870 PF00301 Rubredoxin Y592_06875 PF00258 Flavodoxin Y592_06875 PF00753 Metallo-beta-lactamase superfamily Y592_06875 PF00301 Rubredoxin Y592_06880 PF00210 Ferritin-like domain Y592_06890 PF06397 Desulfoferrodoxin, N-terminal domain Y592_06890 PF01880 Desulfoferrodoxin Y592_06895 PF00072 Response regulator receiver domain Y592_06895 PF01966 HD domain Y592_06910 PF00265 Thymidine kinase Y592_06915 PF00149 Calcineurin-like phosphoesterase Y592_06915 PF02872 5'-nucleotidase, C-terminal domain Y592_06925 PF06971 Putative DNA-binding protein N-terminus Y592_06925 PF02629 CoA binding domain Y592_06930 PF01899 Na+/H+ ion antiporter subunit Y592_06935 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Y592_06950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Y592_06950 PF00361 Proton-conducting membrane transporter Y592_06950 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Y592_06950 PF13244 Domain of unknown function (DUF4040) Y592_06955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Y592_06960 PF00361 Proton-conducting membrane transporter Y592_06965 PF00361 Proton-conducting membrane transporter Y592_06975 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Y592_06980 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Y592_06980 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Y592_06985 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Y592_06990 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_06990 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Y592_07030 PF10609 NUBPL iron-transfer P-loop NTPase Y592_07035 PF07992 Pyridine nucleotide-disulphide oxidoreductase Y592_07035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Y592_07045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Y592_07045 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Y592_07055 PF00132 Bacterial transferase hexapeptide (six repeats) Y592_07060 PF00291 Pyridoxal-phosphate dependent enzyme Y592_07065 PF00731 AIR carboxylase Y592_07070 PF01259 SAICAR synthetase Y592_07075 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Y592_07085 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus Y592_07085 PF00586 AIR synthase related protein, N-terminal domain Y592_07085 PF02769 AIR synthase related protein, C-terminal domain Y592_07085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Y592_07090 PF01293 Phosphoenolpyruvate carboxykinase Y592_07100 PF04227 Indigoidine synthase A like protein Y592_07105 PF12850 Calcineurin-like phosphoesterase superfamily domain Y592_07110 PF09186 Domain of unknown function (DUF1949) Y592_07110 PF01205 Uncharacterized protein family UPF0029 Y592_07115 PF00155 Aminotransferase class I and II Y592_07120 PF00206 Lyase Y592_07120 PF10397 Adenylosuccinate lyase C-terminus Y592_07125 PF01022 Bacterial regulatory protein, arsR family Y592_07130 PF01545 Cation efflux family Y592_07140 PF01242 6-pyruvoyl tetrahydropterin synthase Y592_07145 PF00155 Aminotransferase class I and II Y592_07150 PF02386 Cation transport protein Y592_07165 PF00486 Transcriptional regulatory protein, C terminal Y592_07165 PF00072 Response regulator receiver domain Y592_07170 PF00162 Phosphoglycerate kinase Y592_07170 PF00121 Triosephosphate isomerase Y592_07175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Y592_07175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Y592_07190 PF18269 T3SS EscN ATPase C-terminal domain Y592_07190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y592_07190 PF02874 ATP synthase alpha/beta family, beta-barrel domain Y592_07200 PF00871 Acetokinase family Y592_07205 PF01116 Fructose-bisphosphate aldolase class-II Y592_07225 PF00091 Tubulin/FtsZ family, GTPase domain Y592_07225 PF12327 FtsZ family, C-terminal domain Y592_07230 PF00437 Type II/IV secretion system protein Y592_07240 PF01765 Ribosome recycling factor Y592_07245 PF01255 Putative undecaprenyl diphosphate synthase Y592_07255 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Y592_07255 PF01411 tRNA synthetases class II (A) Y592_07255 PF02272 DHHA1 domain Y592_07275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Y592_07280 PF02719 Polysaccharide biosynthesis protein Y592_07295 PF03764 Elongation factor G, domain IV Y592_07295 PF14492 Elongation Factor G, domain II Y592_07295 PF00009 Elongation factor Tu GTP binding domain Y592_07295 PF00679 Elongation factor G C-terminus Y592_07310 PF13861 FlgD Tudor-like domain Y592_07310 PF03963 Flagellar hook capping protein - N-terminal region Y592_07310 PF13860 FlgD Ig-like domain Y592_07315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Y592_07315 PF00460 Flagella basal body rod protein Y592_07315 PF07559 Flagellar basal body protein FlaE Y592_07320 PF06289 Flagellar and Swarming motility proteins Y592_07325 PF01618 MotA/TolQ/ExbB proton channel family Y592_07330 PF00691 OmpA family Y592_07330 PF13677 Membrane MotB of proton-channel complex MotA/MotB Y592_07340 PF02154 Flagellar motor switch protein FliM Y592_07340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Y592_07345 PF04509 CheC-like family Y592_07345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Y592_07355 PF00209 Sodium:neurotransmitter symporter family Y592_07365 PF04079 Segregation and condensation complex subunit ScpB Y592_07370 PF02616 Segregation and condensation protein ScpA Y592_07375 PF00571 CBS domain Y592_07375 PF01769 Divalent cation transporter Y592_07375 PF03448 MgtE intracellular N domain Y592_07385 PF02441 Flavoprotein Y592_07385 PF04127 DNA / pantothenate metabolism flavoprotein Y592_07390 PF02548 Ketopantoate hydroxymethyltransferase Y592_07405 PF00005 ABC transporter Y592_07410 PF14718 Soluble lytic murein transglycosylase L domain Y592_07410 PF01464 Transglycosylase SLT domain Y592_07425 PF02677 Epoxyqueuosine reductase QueH Y592_07430 PF02580 D-Tyr-tRNA(Tyr) deacylase Y592_07435 PF13291 ACT domain Y592_07435 PF04607 Region found in RelA / SpoT proteins Y592_07435 PF02824 TGS domain Y592_07445 PF00082 Subtilase family Y592_07450 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Y592_07450 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Y592_07450 PF01799 [2Fe-2S] binding domain Y592_07455 PF01799 [2Fe-2S] binding domain Y592_07455 PF00111 2Fe-2S iron-sulfur cluster binding domain Y592_07470 PF01799 [2Fe-2S] binding domain Y592_07470 PF00111 2Fe-2S iron-sulfur cluster binding domain Y592_07475 PF00291 Pyridoxal-phosphate dependent enzyme Y592_07490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Y592_07490 PF02824 TGS domain Y592_07490 PF03129 Anticodon binding domain Y592_07490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Y592_07495 PF00072 Response regulator receiver domain Y592_07505 PF01145 SPFH domain / Band 7 family Y592_07505 PF16200 C-terminal region of band_7 Y592_07515 PF07670 Nucleoside recognition Y592_07520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Y592_07520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Y592_07535 PF03808 Glycosyl transferase WecB/TagA/CpsF family Y592_07540 PF02527 rRNA small subunit methyltransferase G Y592_07545 PF01926 50S ribosome-binding GTPase Y592_07545 PF12631 MnmE helical domain Y592_07545 PF10396 GTP-binding protein TrmE N-terminus Y592_07560 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Y592_07560 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Y592_07560 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Y592_07585 PF03009 Glycerophosphoryl diester phosphodiesterase family Y592_07590 PF00155 Aminotransferase class I and II Y592_07595 PF08240 Alcohol dehydrogenase GroES-like domain Y592_07595 PF00107 Zinc-binding dehydrogenase Y592_07600 PF01554 MatE Y592_07610 PF00005 ABC transporter Y592_07630 PF00206 Lyase Y592_07630 PF10415 Fumarase C C-terminus Y592_07635 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Y592_07635 PF01926 50S ribosome-binding GTPase Y592_07645 PF00348 Polyprenyl synthetase Y592_07655 PF00485 Phosphoribulokinase / Uridine kinase family Y592_07660 PF01966 HD domain Y592_07665 PF03309 Type III pantothenate kinase Y592_07675 PF02163 Peptidase family M50 Y592_07690 PF01177 Asp/Glu/Hydantoin racemase Y592_07695 PF03668 P-loop ATPase protein family Y592_07700 PF01933 Uncharacterised protein family UPF0052 Y592_07705 PF02650 WhiA C-terminal HTH domain Y592_07705 PF14527 WhiA LAGLIDADG-like domain Y592_07710 PF03477 ATP cone domain Y592_07715 PF03449 Transcription elongation factor, N-terminal Y592_07715 PF01272 Transcription elongation factor, GreA/GreB, C-term Y592_07720 PF00152 tRNA synthetases class II (D, K and N) Y592_07720 PF01336 OB-fold nucleic acid binding domain Y592_07730 PF01479 S4 domain Y592_07740 PF00664 ABC transporter transmembrane region Y592_07740 PF00005 ABC transporter Y592_07750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_07750 PF00005 ABC transporter Y592_07755 PF00005 ABC transporter Y592_07755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Y592_07760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Y592_07765 PF00528 Binding-protein-dependent transport system inner membrane component Y592_07770 PF12911 N-terminal TM domain of oligopeptide transport permease C Y592_07770 PF00528 Binding-protein-dependent transport system inner membrane component Y592_07805 PF07498 Rho termination factor, N-terminal domain Y592_07805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Y592_07805 PF07497 Rho termination factor, RNA-binding domain Y592_07815 PF00472 RF-1 domain Y592_07815 PF03462 PCRF domain Y592_07820 PF00437 Type II/IV secretion system protein Y592_07825 PF12169 DNA polymerase III subunits gamma and tau domain III Y592_07850 PF01261 Xylose isomerase-like TIM barrel Y592_07855 PF00795 Carbon-nitrogen hydrolase Y592_07855 PF02540 NAD synthase Y592_07875 PF01790 Prolipoprotein diacylglyceryl transferase Y592_07880 PF01676 Metalloenzyme superfamily Y592_07880 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Y592_07890 PF01475 Ferric uptake regulator family Y592_07895 PF08529 NusA N-terminal domain Y592_07895 PF13184 NusA-like KH domain Y592_07895 PF00575 S1 RNA binding domain Y592_07900 PF17384 RimP C-terminal SH3 domain Y592_07900 PF02576 RimP N-terminal domain Y592_07925 PF00771 FHIPEP family Y592_07930 PF00448 SRP54-type protein, GTPase domain Y592_07935 PF10609 NUBPL iron-transfer P-loop NTPase Y592_07950 PF04509 CheC-like family Y592_07955 PF03975 CheD chemotactic sensory transduction Y592_07960 PF04542 Sigma-70 region 2 Y592_07960 PF04539 Sigma-70 region 3 Y592_07960 PF04545 Sigma-70, region 4 Y592_07990 PF01743 Poly A polymerase head domain Y592_07990 PF12627 Probable RNA and SrmB- binding site of polymerase A Y592_07990 PF13735 tRNA nucleotidyltransferase domain 2 putative Y592_08000 PF12706 Beta-lactamase superfamily domain Y592_08005 PF01281 Ribosomal protein L9, N-terminal domain Y592_08005 PF03948 Ribosomal protein L9, C-terminal domain Y592_08010 PF17827 PrmC N-terminal domain Y592_08010 PF05175 Methyltransferase small domain Y592_08015 PF01883 Iron-sulfur cluster assembly protein Y592_08020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Y592_08020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Y592_08020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Y592_08020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Y592_08025 PF00156 Phosphoribosyl transferase domain Y592_08035 PF01702 Queuine tRNA-ribosyltransferase Y592_08050 PF01925 Sulfite exporter TauE/SafE Y592_08055 PF04468 PSP1 C-terminal conserved region Y592_08065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Y592_08070 PF00004 ATPase family associated with various cellular activities (AAA) Y592_08070 PF05362 Lon protease (S16) C-terminal proteolytic domain Y592_08070 PF02190 ATP-dependent protease La (LON) substrate-binding domain Y592_08075 PF01926 50S ribosome-binding GTPase Y592_08080 PF00750 tRNA synthetases class I (R) Y592_08080 PF03485 Arginyl tRNA synthetase N terminal domain Y592_08080 PF05746 DALR anticodon binding domain Y592_08085 PF00989 PAS fold Y592_08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Y592_08085 PF00512 His Kinase A (phospho-acceptor) domain Y592_08085 PF00672 HAMP domain Y592_08085 PF18698 Histidine kinase sensor domain Y592_08090 PF08668 HDOD domain Y592_08095 PF02033 Ribosome-binding factor A Y592_08105 PF07196 Flagellin hook IN motif Y592_08105 PF07195 Flagellar hook-associated protein 2 C-terminus Y592_08105 PF02465 Flagellar hook-associated protein 2 N-terminus Y592_08125 PF04055 Radical SAM superfamily Y592_08135 PF03193 RsgA GTPase Y592_08135 PF16745 RsgA N-terminal domain Y592_08140 PF11842 Domain of unknown function (DUF3362) Y592_08140 PF08497 Radical SAM N-terminal Y592_08140 PF04055 Radical SAM superfamily Y592_08145 PF03471 Transporter associated domain Y592_08145 PF00571 CBS domain Y592_08150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Y592_08155 PF02463 RecF/RecN/SMC N terminal domain Y592_08165 PF00533 BRCA1 C Terminus (BRCT) domain Y592_08165 PF01653 NAD-dependent DNA ligase adenylation domain Y592_08165 PF03120 NAD-dependent DNA ligase OB-fold domain Y592_08165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Y592_08165 PF12826 Helix-hairpin-helix motif Y592_08175 PF08206 Ribonuclease B OB domain Y592_08175 PF00773 RNB domain Y592_08175 PF17876 Cold shock domain Y592_08175 PF00575 S1 RNA binding domain Y592_08180 PF01029 NusB family Y592_08180 PF01189 16S rRNA methyltransferase RsmB/F Y592_08185 PF04298 Putative neutral zinc metallopeptidase Y592_08190 PF00072 Response regulator receiver domain Y592_08190 PF00486 Transcriptional regulatory protein, C terminal Y592_08195 PF00588 SpoU rRNA Methylase family Y592_08195 PF08032 RNA 2'-O ribose methyltransferase substrate binding Y592_08200 PF03819 MazG nucleotide pyrophosphohydrolase domain Y592_08205 PF01594 AI-2E family transporter Y592_08230 PF14579 Helix-hairpin-helix motif Y592_08230 PF07733 Bacterial DNA polymerase III alpha NTPase domain Y592_08230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Y592_08235 PF00834 Ribulose-phosphate 3 epimerase family Y592_08240 PF01048 Phosphorylase superfamily Y592_08245 PF01368 DHH family Y592_08245 PF02272 DHHA1 domain Y592_08250 PF01590 GAF domain Y592_08250 PF00990 Diguanylate cyclase, GGDEF domain Y592_08250 PF00360 Phytochrome region Y592_08250 PF00563 EAL domain Y592_08255 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Y592_08255 PF01565 FAD binding domain Y592_08260 PF02127 Aminopeptidase I zinc metalloprotease (M18) Y592_08285 PF01238 Phosphomannose isomerase type I Y592_08295 PF00550 Phosphopantetheine attachment site Y592_08300 PF05491 RuvB C-terminal winged helix domain Y592_08300 PF17864 RuvB AAA lid domain Y592_08300 PF05496 Holliday junction DNA helicase RuvB P-loop domain Y592_08305 PF01168 Alanine racemase, N-terminal domain Y592_08315 PF01513 ATP-NAD kinase Y592_08320 PF01895 PhoU domain Y592_08330 PF05958 tRNA (Uracil-5-)-methyltransferase Y592_08335 PF01808 AICARFT/IMPCHase bienzyme Y592_08335 PF02142 MGS-like domain Y592_08345 PF01312 FlhB HrpN YscU SpaS Family Y592_08355 PF00472 RF-1 domain Y592_08355 PF03462 PCRF domain Y592_08360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Y592_08385 PF02881 SRP54-type protein, helical bundle domain Y592_08385 PF00448 SRP54-type protein, GTPase domain Y592_08400 PF02082 Transcriptional regulator Y592_08415 PF03816 Cell envelope-related transcriptional attenuator domain Y592_08420 PF04493 Endonuclease V Y592_08430 PF00698 Acyl transferase domain Y592_08435 PF02632 BioY family Y592_08440 PF03060 Nitronate monooxygenase Y592_08445 PF07977 FabA-like domain Y592_08450 PF00109 Beta-ketoacyl synthase, N-terminal domain Y592_08450 PF02801 Beta-ketoacyl synthase, C-terminal domain Y592_08455 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Y592_08455 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Y592_08460 PF02445 Quinolinate synthetase A protein Y592_08465 PF01958 Domain of unknown function DUF108 Y592_08465 PF03447 Homoserine dehydrogenase, NAD binding domain Y592_08475 PF00128 Alpha amylase, catalytic domain Y592_08480 PF17200 Single Cache domain 2 Y592_08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Y592_08480 PF00672 HAMP domain Y592_08485 PF00478 IMP dehydrogenase / GMP reductase domain Y592_08485 PF00571 CBS domain Y592_08490 PF01699 Sodium/calcium exchanger protein Y592_08495 PF03600 Citrate transporter Y592_08505 PF02508 Rnf-Nqr subunit, membrane protein Y592_08510 PF02508 Rnf-Nqr subunit, membrane protein Y592_08520 PF03116 NQR2, RnfD, RnfE family Y592_08525 PF13375 RnfC Barrel sandwich hybrid domain Y592_08525 PF10531 SLBB domain Y592_08525 PF13237 4Fe-4S dicluster domain Y592_08525 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Y592_08535 PF10458 Valyl tRNA synthetase tRNA binding arm Y592_08535 PF00133 tRNA synthetases class I (I, L, M and V) Y592_08535 PF08264 Anticodon-binding domain of tRNA Y592_08540 PF08245 Mur ligase middle domain Y592_08540 PF02875 Mur ligase family, glutamate ligase domain Y592_08550 PF01979 Amidohydrolase family Y592_08555 PF04055 Radical SAM superfamily Y592_08555 PF16199 Radical_SAM C-terminal domain Y592_08560 PF00005 ABC transporter Y592_08575 PF13186 Iron-sulfur cluster-binding domain Y592_08575 PF04055 Radical SAM superfamily Y592_08615 PF00005 ABC transporter Y592_08615 PF00664 ABC transporter transmembrane region Y592_08645 PF00664 ABC transporter transmembrane region Y592_08645 PF00005 ABC transporter Y592_08695 PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system Y592_08715 PF04055 Radical SAM superfamily Y592_08715 PF13186 Iron-sulfur cluster-binding domain Y592_08770 PF01964 Radical SAM ThiC family Y592_08780 PF10120 Thiamine-phosphate synthase Y592_08780 PF08543 Phosphomethylpyrimidine kinase Y592_08785 PF00365 Phosphofructokinase Y592_08790 PF07969 Amidohydrolase family Y592_08795 PF04055 Radical SAM superfamily Y592_08795 PF06968 Biotin and Thiamin Synthesis associated domain Y592_08815 PF00037 4Fe-4S binding domain Y592_08815 PF02906 Iron only hydrogenase large subunit, C-terminal domain Y592_08815 PF02256 Iron hydrogenase small subunit Y592_08815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Y592_08830 PF14622 Ribonuclease-III-like Y592_08830 PF00035 Double-stranded RNA binding motif Y592_08835 PF02540 NAD synthase Y592_08835 PF00117 Glutamine amidotransferase class-I Y592_08835 PF00958 GMP synthase C terminal domain Y592_08840 PF02237 Biotin protein ligase C terminal domain Y592_08840 PF03099 Biotin/lipoate A/B protein ligase family Y592_08840 PF08279 HTH domain Y592_08845 PF03023 Lipid II flippase MurJ Y592_08850 PF04060 Putative Fe-S cluster Y592_08855 PF02481 DNA recombination-mediator protein A Y592_08855 PF17782 DprA winged helix domain Y592_08860 PF02569 Pantoate-beta-alanine ligase Y592_08865 PF01055 Glycosyl hydrolases family 31 Y592_08865 PF17137 Domain of unknown function (DUF5110) Y592_08865 PF13802 Galactose mutarotase-like Y592_08865 PF16338 Domain of unknown function (DUF4968) Y592_08870 PF03725 3' exoribonuclease family, domain 2 Y592_08870 PF01138 3' exoribonuclease family, domain 1 Y592_08870 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Y592_08870 PF00013 KH domain Y592_08870 PF00575 S1 RNA binding domain Y592_08875 PF00675 Insulinase (Peptidase family M16) Y592_08875 PF05193 Peptidase M16 inactive domain Y592_08885 PF10431 C-terminal, D2-small domain, of ClpB protein Y592_08885 PF00004 ATPase family associated with various cellular activities (AAA) Y592_08885 PF07724 AAA domain (Cdc48 subfamily) Y592_08890 PF00528 Binding-protein-dependent transport system inner membrane component Y592_08895 PF00528 Binding-protein-dependent transport system inner membrane component Y592_08900 PF00923 Transaldolase/Fructose-6-phosphate aldolase Y592_08905 PF01336 OB-fold nucleic acid binding domain Y592_08905 PF02938 GAD domain Y592_08905 PF00152 tRNA synthetases class II (D, K and N) Y592_08910 PF01740 STAS domain Y592_08915 PF02224 Cytidylate kinase Y592_08920 PF02401 LytB protein Y592_08925 PF01926 50S ribosome-binding GTPase Y592_08925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Y592_08940 PF00072 Response regulator receiver domain Y592_08940 PF01966 HD domain Y592_08945 PF00468 Ribosomal protein L34 Y592_08950 PF00825 Ribonuclease P Y592_08955 PF01809 Putative membrane protein insertion efficiency factor Y592_08960 PF02096 60Kd inner membrane protein Y592_08965 PF01424 R3H domain Y592_08965 PF14804 Jag N-terminus Y592_08980 PF00120 Glutamine synthetase, catalytic domain Y592_08980 PF03951 Glutamine synthetase, beta-Grasp domain Y592_08985 PF00990 Diguanylate cyclase, GGDEF domain Y592_08995 PF00232 Glycosyl hydrolase family 1 Y592_09020 PF00465 Iron-containing alcohol dehydrogenase Y592_09020 PF00171 Aldehyde dehydrogenase family Y592_09060 PF00465 Iron-containing alcohol dehydrogenase Y592_09060 PF00171 Aldehyde dehydrogenase family Y592_09085 PF01118 Semialdehyde dehydrogenase, NAD binding domain Y592_09085 PF02774 Semialdehyde dehydrogenase, dimerisation domain Y592_09120 PF03787 RAMP superfamily Y592_09125 PF03750 Csm2 Type III-A Y592_09130 PF01966 HD domain Y592_09130 PF18211 Csm1 subunit domain B Y592_09135 PF01966 HD domain Y592_09135 PF18211 Csm1 subunit domain B Y592_09160 PF01867 CRISPR associated protein Cas1 Y592_09165 PF09827 CRISPR associated protein Cas2 Y592_09190 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Y592_09190 PF07678 A-macroglobulin TED domain Y592_09190 PF01835 MG2 domain Y592_09190 PF07703 Alpha-2-macroglobulin bait region domain Y592_09190 PF00207 Alpha-2-macroglobulin family Y592_09200 PF06672 Protein of unknown function (DUF1175) Y592_09210 PF00106 short chain dehydrogenase Y592_09215 PF01925 Sulfite exporter TauE/SafE Y592_09220 PF01546 Peptidase family M20/M25/M40 Y592_09235 PF00528 Binding-protein-dependent transport system inner membrane component Y592_09240 PF00528 Binding-protein-dependent transport system inner membrane component Y592_09245 PF17912 MalK OB fold domain Y592_09245 PF00005 ABC transporter Y592_09245 PF03459 TOBE domain Y592_09250 PF00534 Glycosyl transferases group 1