locus-tag	class	description
Tagg_0003	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
Tagg_0007	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Tagg_0008	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
Tagg_0011	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
Tagg_0015	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
Tagg_0016	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
Tagg_0017	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
Tagg_0023	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Tagg_0025	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
Tagg_0026	COG2890	protein-(glutamine-N5) methyltransferase activity
Tagg_0027	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Tagg_0033	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
Tagg_0037	COG1185	polyribonucleotide nucleotidyltransferase activity
Tagg_0047	COG1185	polyribonucleotide nucleotidyltransferase activity
Tagg_0051	COG3260	NADH ubiquinone oxidoreductase 20
Tagg_0052	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tagg_0053	COG3261	NADH dehydrogenase
Tagg_0053	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
Tagg_0057	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Tagg_0058	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
Tagg_0061	COG0546	phosphoglycolate phosphatase activity
Tagg_0063	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
Tagg_0071	COG4974	Belongs to the 'phage' integrase family
Tagg_0074	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Tagg_0088	COG2239	Acts as a magnesium transporter
Tagg_0098	COG0494	nUDIX hydrolase
Tagg_0107	COG0651	ATP synthesis coupled electron transport
Tagg_0108	COG1863	multisubunit Na H antiporter MnhE subunit
Tagg_0112	COG1320	monovalent cation:proton antiporter activity
Tagg_0113	COG2212	antiporter activity
Tagg_0120	COG2414	aldehyde ferredoxin oxidoreductase
Tagg_0124	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
Tagg_0128	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
Tagg_0134	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
Tagg_0137	COG1234	tRNA 3'-trailer cleavage
Tagg_0138	COG2189	Belongs to the N(4) N(6)-methyltransferase family
Tagg_0143	COG0045	succinate-CoA ligase (ADP-forming) activity
Tagg_0143	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Tagg_0143	COG1042	CoA-binding domain protein
Tagg_0145	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
Tagg_0152	COG1867	N(2),N(2)-dimethylguanosine tRNA methyltransferase
Tagg_0158	COG1757	Na H antiporter
Tagg_0160	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
Tagg_0167	COG0459	protein refolding
Tagg_0170	COG0551	DNA topoisomerase type I activity
Tagg_0170	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
Tagg_0174	COG0148	phosphopyruvate hydratase activity
Tagg_0178	COG1222	aaa ATPase
Tagg_0181	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
Tagg_0182	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Tagg_0185	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Tagg_0190	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tagg_0191	COG0076	glutamate decarboxylase activity
Tagg_0194	COG1812	S-adenosylmethionine synthetase (AdoMet synthetase)
Tagg_0201	COG0516	GMP reductase activity
Tagg_0205	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
Tagg_0210	COG1573	uracil-dna glycosylase
Tagg_0212	COG1793	dna ligase
Tagg_0218	COG0501	Belongs to the peptidase M48B family
Tagg_0236	COG1529	Aldehyde oxidase and xanthine dehydrogenase
Tagg_0239	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Tagg_0245	COG1063	alcohol dehydrogenase
Tagg_0251	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Tagg_0252	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
Tagg_0268	COG0017	Asparaginyl-tRNA synthetase
Tagg_0269	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
Tagg_0271	COG0402	S-adenosylhomocysteine deaminase activity
Tagg_0275	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
Tagg_0280	COG1122	ATPase activity
Tagg_0283	COG1528	Iron-storage protein
Tagg_0285	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
Tagg_0287	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Tagg_0289	COG0601	transmembrane transport
Tagg_0291	COG0444	Belongs to the ABC transporter superfamily
Tagg_0293	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
Tagg_0294	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Tagg_0294	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Tagg_0297	COG0072	phenylalanine-tRNA ligase activity
Tagg_0299	COG0058	SHG alpha-glucan phosphorylase activity
Tagg_0300	COG0589	response to stress
Tagg_0301	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
Tagg_0302	COG0126	phosphoglycerate kinase activity
Tagg_0303	COG0167	dihydroorotate dehydrogenase activity
Tagg_0307	COG0549	Belongs to the carbamate kinase family
Tagg_0310	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Tagg_0312	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
Tagg_0316	COG0489	protein tyrosine kinase activity
Tagg_0319	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
Tagg_0321	COG4152	abc transporter atp-binding protein
Tagg_0323	COG1141	Ferredoxin
Tagg_0327	COG0303	'Molybdopterin
Tagg_0328	COG4581	dead DEAH box helicase
Tagg_0329	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Tagg_0335	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
Tagg_0336	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Tagg_0345	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
Tagg_0349	COG1131	(ABC) transporter
Tagg_0350	COG0534	Mate efflux family protein
Tagg_0353	COG1122	ATPase activity
Tagg_0355	COG0312	modulator of DNA gyrase
Tagg_0356	COG0312	modulator of DNA gyrase
Tagg_0357	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
Tagg_0357	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
Tagg_0360	COG1994	Peptidase M50
Tagg_0378	COG0445	tRNA wobble uridine modification
Tagg_0379	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
Tagg_0382	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
Tagg_0383	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
Tagg_0384	COG1902	pentaerythritol trinitrate reductase activity
Tagg_0384	COG0446	pyridine nucleotide-disulphide oxidoreductase
Tagg_0386	COG1013	pyruvate-flavodoxin oxidoreductase activity
Tagg_0387	COG0674	pyruvate-flavodoxin oxidoreductase activity
Tagg_0389	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Tagg_0391	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Tagg_0391	COG0674	pyruvate-flavodoxin oxidoreductase activity
Tagg_0392	COG1013	pyruvate-flavodoxin oxidoreductase activity
Tagg_0397	COG1136	(ABC) transporter
Tagg_0397	COG0577	efflux transmembrane transporter activity
Tagg_0399	COG1136	(ABC) transporter
Tagg_0401	COG1131	(ABC) transporter
Tagg_0403	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
Tagg_0405	COG0509	glycine decarboxylation via glycine cleavage system
Tagg_0406	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Tagg_0407	COG0404	The glycine cleavage system catalyzes the degradation of glycine
Tagg_0408	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Tagg_0409	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
Tagg_0412	COG1363	Peptidase, m42
Tagg_0413	COG0306	phosphate transporter
Tagg_0414	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
Tagg_0414	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Tagg_0418	COG0733	neurotransmitter:sodium symporter activity
Tagg_0419	COG0511	ligase activity, forming carbon-carbon bonds
Tagg_0426	COG0714	Associated with various cellular activities
Tagg_0429	COG3608	succinylglutamate desuccinylase aspartoacylase
Tagg_0429	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
Tagg_0435	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Tagg_0442	COG1129	ABC transporter
Tagg_0446	COG1230	cation diffusion facilitator family transporter
Tagg_0450	COG0330	HflC and HflK could
Tagg_0453	COG0018	arginyl-trna synthetase
Tagg_0455	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Tagg_0456	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
Tagg_0457	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Tagg_0462	COG0037	tRNA processing
Tagg_0481	COG0312	modulator of DNA gyrase
Tagg_0482	COG2059	Chromate
Tagg_0484	COG1446	asparaginase
Tagg_0486	COG1940	carbohydrate kinase activity
Tagg_0487	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Tagg_0487	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Tagg_0488	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tagg_0493	COG0864	Transcriptional regulator
Tagg_0500	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
Tagg_0502	COG1166	arginine decarboxylase activity
Tagg_0504	COG0409	Hydrogenase expression formation protein
Tagg_0513	COG4149	molybdate abc transporter
Tagg_0519	COG2267	carboxylic ester hydrolase activity
Tagg_0521	COG1522	sequence-specific DNA binding
Tagg_0523	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Tagg_0524	COG1301	dicarboxylic acid transport
Tagg_0528	COG0235	Class ii aldolase
Tagg_0532	COG0574	Belongs to the PEP-utilizing enzyme family
Tagg_0532	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
Tagg_0533	COG0439	Biotin carboxylase
Tagg_0535	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
Tagg_0538	COG2095	MarC family integral membrane protein
Tagg_0539	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Tagg_0540	COG0719	Fe-S assembly protein
Tagg_0541	COG0495	leucyl-tRNA aminoacylation
Tagg_0548	COG0463	Glycosyl transferase, family 2
Tagg_0549	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
Tagg_0550	COG0295	cytidine deaminase activity
Tagg_0551	COG2226	methyltransferase
Tagg_0553	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
Tagg_0554	COG1830	Aldolase
Tagg_0556	COG1078	dGTPase activity
Tagg_0558	COG0450	alkyl hydroperoxide reductase
Tagg_0559	COG0426	domain, Protein
Tagg_0560	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
Tagg_0561	COG1091	dTDP-4-dehydrorhamnose reductase activity
Tagg_0562	COG1088	dTDP-glucose 4,6-dehydratase activity
Tagg_0576	COG0463	Glycosyl transferase, family 2
Tagg_0579	COG0438	transferase activity, transferring glycosyl groups
Tagg_0581	COG1215	transferase activity, transferring glycosyl groups
Tagg_0587	COG1215	transferase activity, transferring glycosyl groups
Tagg_0588	COG1522	sequence-specific DNA binding
Tagg_0590	COG2033	superoxide reductase activity
Tagg_0597	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
Tagg_0598	COG1804	L-carnitine dehydratase bile acid-inducible protein F
Tagg_0599	COG0405	Gamma-glutamyltransferase
Tagg_0604	COG1011	Hydrolase
Tagg_0605	COG0521	Mo-molybdopterin cofactor biosynthetic process
Tagg_0606	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
Tagg_0609	COG1058	Belongs to the CinA family
Tagg_0609	COG1546	Belongs to the CinA family
Tagg_0612	COG3842	ATPase activity
Tagg_0617	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
Tagg_0623	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
Tagg_0624	COG3260	NADH ubiquinone oxidoreductase 20
Tagg_0626	COG0649	NAD binding
Tagg_0632	COG1006	Multisubunit Na H antiporter MnhC subunit
Tagg_0642	COG1449	Belongs to the glycosyl hydrolase 57 family
Tagg_0644	COG3281	Trehalose synthase
Tagg_0647	COG1131	(ABC) transporter
Tagg_0650	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
Tagg_0651	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
Tagg_0658	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
Tagg_0660	COG0017	Asparaginyl-tRNA synthetase
Tagg_0661	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
Tagg_0662	COG2264	protein methyltransferase activity
Tagg_0663	COG1702	phosphate starvation-inducible protein PhoH
Tagg_0672	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
Tagg_0673	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
Tagg_0674	COG1988	membrane-bound metal-dependent
Tagg_0677	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Tagg_0679	COG2151	metal-sulfur cluster biosynthetic enzyme
Tagg_0680	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
Tagg_0684	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Tagg_0686	COG1201	RNA secondary structure unwinding
Tagg_0692	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
Tagg_0696	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
Tagg_0697	COG4608	Belongs to the ABC transporter superfamily
Tagg_0698	COG0444	Belongs to the ABC transporter superfamily
Tagg_0699	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
Tagg_0701	COG0601	transmembrane transport
Tagg_0704	COG0017	Asparaginyl-tRNA synthetase
Tagg_0707	COG0563	adenylate kinase activity
Tagg_0710	COG0656	L-ascorbic acid biosynthetic process
Tagg_0719	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Tagg_0719	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
Tagg_0724	COG0301	tRNA thio-modification
Tagg_0725	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Tagg_0725	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
Tagg_0726	COG0045	succinate-CoA ligase (ADP-forming) activity
Tagg_0726	COG1042	CoA-binding domain protein
Tagg_0726	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
Tagg_0731	COG0432	Pfam Uncharacterised protein family UPF0047
Tagg_0741	COG0714	Associated with various cellular activities
Tagg_0761	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
Tagg_0767	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
Tagg_0775	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
Tagg_0776	COG0352	thiamine-phosphate diphosphorylase activity
Tagg_0777	COG0351	phosphomethylpyrimidine kinase
Tagg_0779	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
Tagg_0780	COG0518	GMP synthase (glutamine-hydrolyzing) activity
Tagg_0780	COG0519	Catalyzes the synthesis of GMP from XMP
Tagg_0783	COG0095	Lipoate-protein ligase
Tagg_0789	COG1966	Carbon starvation protein
Tagg_0791	COG0003	Pfam Anion-transporting ATPase
Tagg_0813	COG0419	ATPase involved in DNA repair
Tagg_0816	COG0124	histidyl-tRNA synthetase
Tagg_0818	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
Tagg_0823	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
Tagg_0827	COG0674	pyruvate-flavodoxin oxidoreductase activity
Tagg_0838	COG1201	RNA secondary structure unwinding
Tagg_0845	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
Tagg_0847	COG0089	rRNA binding
Tagg_0848	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
Tagg_0851	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
Tagg_0852	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
Tagg_0853	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
Tagg_0854	COG0255	Belongs to the universal ribosomal protein uL29 family
Tagg_0856	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
Tagg_0857	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
Tagg_0860	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
Tagg_0862	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
Tagg_0863	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
Tagg_0867	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
Tagg_0869	COG0200	Binds to the 23S rRNA
Tagg_0873	COG0563	adenylate kinase activity
Tagg_0876	COG2813	Specifically methylates the guanine in position
Tagg_0891	COG0714	Associated with various cellular activities
Tagg_0897	COG0366	Alpha amylase catalytic
Tagg_0906	COG1850	ribulose-bisphosphate carboxylase activity
Tagg_0909	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
Tagg_0912	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
Tagg_0916	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
Tagg_0917	COG0513	Belongs to the DEAD box helicase family
Tagg_0920	COG1489	DNA binding
Tagg_0921	COG0717	Belongs to the dCTP deaminase family
Tagg_0936	COG0552	protein localization to endoplasmic reticulum
Tagg_0940	COG0081	regulation of translation
Tagg_0943	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Tagg_0945	COG1953	Uracil, thiamine, allantoin
Tagg_0951	COG4166	transmembrane transport
Tagg_0952	COG0601	transmembrane transport
Tagg_0954	COG0444	Belongs to the ABC transporter superfamily
Tagg_0955	COG4608	Belongs to the ABC transporter superfamily
Tagg_0961	COG0471	metal ion transport
Tagg_0962	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
Tagg_0965	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tagg_0981	COG1131	(ABC) transporter
Tagg_0989	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tagg_0993	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
Tagg_0996	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
Tagg_0998	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
Tagg_0998	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
Tagg_1007	COG0525	valine-tRNA ligase activity
Tagg_1008	COG1796	DNA polymerase
Tagg_1008	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
Tagg_1012	COG0189	ligase activity
Tagg_1015	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
Tagg_1016	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
Tagg_1018	COG0045	succinate-CoA ligase (ADP-forming) activity
Tagg_1019	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Tagg_1021	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
Tagg_1023	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
Tagg_1027	COG0649	NAD binding
Tagg_1030	COG1320	monovalent cation:proton antiporter activity
Tagg_1034	COG1863	multisubunit Na H antiporter MnhE subunit
Tagg_1036	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Tagg_1037	COG1899	peptidyl-lysine modification to peptidyl-hypusine
Tagg_1044	COG1515	deoxyribonuclease V activity
Tagg_1054	COG0438	transferase activity, transferring glycosyl groups
Tagg_1059	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
Tagg_1063	COG1324	tolerance protein
Tagg_1066	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
Tagg_1073	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
Tagg_1076	COG1121	(ABC) transporter
Tagg_1077	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
Tagg_1078	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
Tagg_1086	COG0215	cysteine-tRNA ligase activity
Tagg_1087	COG0813	purine-nucleoside phosphorylase activity
Tagg_1094	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
Tagg_1095	COG0156	8-amino-7-oxononanoate synthase activity
Tagg_1098	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tagg_1109	COG0704	Plays a role in the regulation of phosphate uptake
Tagg_1110	COG2723	6-phospho-beta-galactosidase activity
Tagg_1113	COG4166	transmembrane transport
Tagg_1114	COG0601	transmembrane transport
Tagg_1115	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
Tagg_1116	COG0444	Belongs to the ABC transporter superfamily
Tagg_1122	COG1175	transmembrane transport
Tagg_1123	COG0395	ABC-type sugar transport system, permease component
Tagg_1124	COG3842	ATPase activity
Tagg_1125	COG3842	ATPase activity
Tagg_1132	COG1744	ABC transporter substrate-binding protein PnrA-like
Tagg_1140	COG0306	phosphate transporter
Tagg_1141	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Tagg_1142	COG0006	proline dipeptidase activity
Tagg_1145	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
Tagg_1146	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Tagg_1164	COG0504	CTP synthase activity
Tagg_1165	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
Tagg_1168	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
Tagg_1170	COG0023	Translation Initiation Factor
Tagg_1172	COG0010	Belongs to the arginase family
Tagg_1176	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
Tagg_1187	COG1110	DNA topoisomerase II activity
Tagg_1188	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
Tagg_1189	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tagg_1190	COG1444	tRNA N-acetyltransferase activity
Tagg_1191	COG1486	melibiose metabolic process
Tagg_1195	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
Tagg_1196	COG0009	L-threonylcarbamoyladenylate synthase
Tagg_1197	COG1404	Belongs to the peptidase S8 family
Tagg_1198	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
Tagg_1199	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
Tagg_1200	COG0534	Mate efflux family protein
Tagg_1212	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
Tagg_1225	COG1110	DNA topoisomerase II activity
Tagg_1230	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
Tagg_1237	COG0469	pyruvate kinase activity
Tagg_1241	COG1980	fructose-bisphosphate aldolase activity
Tagg_1242	COG1129	ABC transporter
Tagg_1249	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
Tagg_1250	COG1047	Peptidyl-prolyl cis-trans
Tagg_1252	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
Tagg_1253	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Tagg_1255	COG0430	RNA-3'-phosphate cyclase activity
Tagg_1256	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
Tagg_1260	COG1478	Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives
Tagg_1260	COG0778	Nitroreductase
Tagg_1261	COG1592	Rubrerythrin
Tagg_1264	COG0674	pyruvate-flavodoxin oxidoreductase activity
Tagg_1264	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
Tagg_1265	COG1013	pyruvate-flavodoxin oxidoreductase activity
Tagg_1278	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
Tagg_1280	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
Tagg_1283	COG0343	queuine tRNA-ribosyltransferase activity
Tagg_1287	COG0433	COG0433 Predicted ATPase
Tagg_1288	COG0459	protein refolding
Tagg_1292	COG0270	DNA (cytosine-5-)-methyltransferase activity
Tagg_1294	COG0667	Aldo Keto reductase
Tagg_1295	COG0492	ferredoxin-NADP+ reductase activity
Tagg_1296	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
Tagg_1303	COG3842	ATPase activity
Tagg_1304	COG3833	ABC-type maltose transport systems, permease component
Tagg_1305	COG1175	transmembrane transport
Tagg_1307	COG0396	ATPase activity
Tagg_1308	COG0719	Fe-S assembly protein
Tagg_1310	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
Tagg_1314	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
Tagg_1317	COG0864	Transcriptional regulator
Tagg_1324	COG0417	DNA replication proofreading
Tagg_1326	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
Tagg_1328	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
Tagg_1333	COG1185	polyribonucleotide nucleotidyltransferase activity
Tagg_1335	COG1185	polyribonucleotide nucleotidyltransferase activity
Tagg_1338	COG1028	Short-chain dehydrogenase reductase Sdr
Tagg_1345	COG0012	GTP binding
Tagg_1363	COG0438	transferase activity, transferring glycosyl groups
Tagg_1367	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
Tagg_1368	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
Tagg_1370	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
Tagg_1379	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Tagg_1385	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
Tagg_1387	COG1304	FMN binding
Tagg_1388	COG1355	regulation of microtubule-based process
Tagg_1389	COG0052	Belongs to the universal ribosomal protein uS2 family
Tagg_1391	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Tagg_1392	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
Tagg_1395	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
Tagg_1396	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
Tagg_1397	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
Tagg_1400	COG0049	tRNA binding
Tagg_1405	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Tagg_1406	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
Tagg_1407	COG0085	RNA polymerase activity
Tagg_1409	COG0668	transmembrane transport