locus-tag class description NIES2134_100010 PF08240 Alcohol dehydrogenase GroES-like domain NIES2134_100010 PF00107 Zinc-binding dehydrogenase NIES2134_100030 PF13180 PDZ domain NIES2134_100050 PF01979 Amidohydrolase family NIES2134_100050 PF00449 Urease alpha-subunit, N-terminal domain NIES2134_100070 PF03170 Bacterial cellulose synthase subunit NIES2134_100070 PF00535 Glycosyl transferase family 2 NIES2134_100070 PF07238 PilZ domain NIES2134_100100 PF00005 ABC transporter NIES2134_100130 PF01546 Peptidase family M20/M25/M40 NIES2134_100130 PF07687 Peptidase dimerisation domain NIES2134_100140 PF01928 CYTH domain NIES2134_100150 PF03055 Retinal pigment epithelial membrane protein NIES2134_100160 PF03092 BT1 family NIES2134_100170 PF11910 Cyanobacterial and plant NDH-1 subunit O NIES2134_100180 PF01050 Mannose-6-phosphate isomerase NIES2134_100180 PF00483 Nucleotidyl transferase NIES2134_100190 PF02681 Divergent PAP2 family NIES2134_100200 PF00348 Polyprenyl synthetase NIES2134_100210 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NIES2134_100210 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NIES2134_100250 PF01475 Ferric uptake regulator family NIES2134_100290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_100290 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_100290 PF07689 KaiB domain NIES2134_100310 PF01348 Type II intron maturase NIES2134_100310 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES2134_100330 PF13419 Haloacid dehalogenase-like hydrolase NIES2134_100350 PF13361 UvrD-like helicase C-terminal domain NIES2134_100350 PF00580 UvrD/REP helicase N-terminal domain NIES2134_100370 PF13181 Tetratricopeptide repeat NIES2134_100370 PF00535 Glycosyl transferase family 2 NIES2134_100390 PF01618 MotA/TolQ/ExbB proton channel family NIES2134_100400 PF04542 Sigma-70 region 2 NIES2134_100400 PF08281 Sigma-70, region 4 NIES2134_100450 PF02684 Lipid-A-disaccharide synthetase NIES2134_100460 PF04107 Glutamate-cysteine ligase family 2(GCS2) NIES2134_100480 PF01556 DnaJ C terminal domain NIES2134_100480 PF00226 DnaJ domain NIES2134_100480 PF00684 DnaJ central domain NIES2134_100490 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIES2134_100490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIES2134_100490 PF01842 ACT domain NIES2134_100510 PF13439 Glycosyltransferase Family 4 NIES2134_100510 PF00534 Glycosyl transferases group 1 NIES2134_100520 PF00005 ABC transporter NIES2134_100540 PF00699 Urease beta subunit NIES2134_100550 PF01243 Pyridoxamine 5'-phosphate oxidase NIES2134_100550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NIES2134_100570 PF03330 Lytic transglycolase NIES2134_100580 PF01964 Radical SAM ThiC family NIES2134_100590 PF01384 Phosphate transporter family NIES2134_100610 PF01593 Flavin containing amine oxidoreductase NIES2134_100630 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES2134_100630 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES2134_100650 PF12697 Alpha/beta hydrolase family NIES2134_100680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NIES2134_100700 PF00072 Response regulator receiver domain NIES2134_100710 PF00072 Response regulator receiver domain NIES2134_100730 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NIES2134_100730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES2134_100740 PF01627 Hpt domain NIES2134_100740 PF02895 Signal transducing histidine kinase, homodimeric domain NIES2134_100740 PF01584 CheW-like domain NIES2134_100740 PF00072 Response regulator receiver domain NIES2134_100740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_100750 PF08148 DSHCT (NUC185) domain NIES2134_100750 PF00271 Helicase conserved C-terminal domain NIES2134_100750 PF00270 DEAD/DEAH box helicase NIES2134_100770 PF14251 Domain of unknown function (DUF4346) NIES2134_100820 PF00085 Thioredoxin NIES2134_100860 PF00793 DAHP synthetase I family NIES2134_100860 PF18152 DAHP synthase ferredoxin-like domain NIES2134_100940 PF00155 Aminotransferase class I and II NIES2134_100950 PF00226 DnaJ domain NIES2134_100950 PF01556 DnaJ C terminal domain NIES2134_100960 PF02548 Ketopantoate hydroxymethyltransferase NIES2134_100980 PF01842 ACT domain NIES2134_100980 PF00742 Homoserine dehydrogenase NIES2134_100980 PF03447 Homoserine dehydrogenase, NAD binding domain NIES2134_100990 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_101000 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_101030 PF02514 CobN/Magnesium Chelatase NIES2134_101030 PF11965 Domain of unknown function (DUF3479) NIES2134_101040 PF00005 ABC transporter NIES2134_101060 PF03741 Integral membrane protein TerC family NIES2134_101070 PF00334 Nucleoside diphosphate kinase NIES2134_101080 PF02567 Phenazine biosynthesis-like protein NIES2134_101090 PF12557 Cob(I)alamin adenosyltransferase N terminal NIES2134_101090 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NIES2134_101100 PF04545 Sigma-70, region 4 NIES2134_101100 PF04539 Sigma-70 region 3 NIES2134_101100 PF04542 Sigma-70 region 2 NIES2134_101100 PF00140 Sigma-70 factor, region 1.2 NIES2134_101110 PF15975 Flotillin NIES2134_101110 PF01145 SPFH domain / Band 7 family NIES2134_101120 PF01145 SPFH domain / Band 7 family NIES2134_101120 PF15975 Flotillin NIES2134_101140 PF02569 Pantoate-beta-alanine ligase NIES2134_101140 PF02224 Cytidylate kinase NIES2134_101170 PF07687 Peptidase dimerisation domain NIES2134_101170 PF01546 Peptidase family M20/M25/M40 NIES2134_101180 PF00072 Response regulator receiver domain NIES2134_101200 PF02463 RecF/RecN/SMC N terminal domain NIES2134_101220 PF04472 Cell division protein SepF NIES2134_101230 PF01891 Cobalt uptake substrate-specific transmembrane region NIES2134_101240 PF02553 Cobalt transport protein component CbiN NIES2134_101260 PF00005 ABC transporter NIES2134_101270 PF00072 Response regulator receiver domain NIES2134_101290 PF13180 PDZ domain NIES2134_101300 PF02153 Prephenate dehydrogenase NIES2134_101330 PF00069 Protein kinase domain NIES2134_101350 PF00069 Protein kinase domain NIES2134_101350 PF00805 Pentapeptide repeats (8 copies) NIES2134_101370 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N NIES2134_101390 PF12169 DNA polymerase III subunits gamma and tau domain III NIES2134_101410 PF11264 Thylakoid formation protein NIES2134_101430 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES2134_101440 PF02075 Crossover junction endodeoxyribonuclease RuvC NIES2134_101500 PF02938 GAD domain NIES2134_101500 PF00152 tRNA synthetases class II (D, K and N) NIES2134_101500 PF01336 OB-fold nucleic acid binding domain NIES2134_101520 PF00924 Mechanosensitive ion channel NIES2134_101540 PF00936 BMC domain NIES2134_101550 PF03309 Type III pantothenate kinase NIES2134_101570 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_101570 PF12911 N-terminal TM domain of oligopeptide transport permease C NIES2134_101580 PF00072 Response regulator receiver domain NIES2134_101580 PF00486 Transcriptional regulatory protein, C terminal NIES2134_101600 PF12706 Beta-lactamase superfamily domain NIES2134_101600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NIES2134_101630 PF00561 alpha/beta hydrolase fold NIES2134_101640 PF07694 5TMR of 5TMR-LYT NIES2134_101640 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_101650 PF00873 AcrB/AcrD/AcrF family NIES2134_101670 PF12773 Double zinc ribbon NIES2134_101670 PF00498 FHA domain NIES2134_101680 PF00069 Protein kinase domain NIES2134_101720 PF01555 DNA methylase NIES2134_101730 PF02384 N-6 DNA Methylase NIES2134_101740 PF07669 Eco57I restriction-modification methylase NIES2134_101790 PF00124 Photosynthetic reaction centre protein NIES2134_101830 PF00005 ABC transporter NIES2134_101830 PF13732 Domain of unknown function (DUF4162) NIES2134_101850 PF00117 Glutamine amidotransferase class-I NIES2134_101850 PF02885 Glycosyl transferase family, helical bundle domain NIES2134_101850 PF00591 Glycosyl transferase family, a/b domain NIES2134_101880 PF08865 Domain of unknown function (DUF1830) NIES2134_101900 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIES2134_101900 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIES2134_101910 PF00266 Aminotransferase class-V NIES2134_101940 PF01063 Amino-transferase class IV NIES2134_101960 PF00069 Protein kinase domain NIES2134_102000 PF01728 FtsJ-like methyltransferase NIES2134_102000 PF01479 S4 domain NIES2134_102030 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIES2134_102030 PF00578 AhpC/TSA family NIES2134_102060 PF00578 AhpC/TSA family NIES2134_102080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES2134_102090 PF07670 Nucleoside recognition NIES2134_102090 PF07664 Ferrous iron transport protein B C terminus NIES2134_102090 PF02421 Ferrous iron transport protein B NIES2134_102120 PF02405 Permease MlaE NIES2134_102140 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES2134_102170 PF00462 Glutaredoxin NIES2134_102170 PF08534 Redoxin NIES2134_102200 PF08078 PsaX family NIES2134_102210 PF00085 Thioredoxin NIES2134_102230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NIES2134_102240 PF03819 MazG nucleotide pyrophosphohydrolase domain NIES2134_102250 PF01430 Hsp33 protein NIES2134_102270 PF01553 Acyltransferase NIES2134_102300 PF13419 Haloacid dehalogenase-like hydrolase NIES2134_102320 PF00270 DEAD/DEAH box helicase NIES2134_102320 PF00271 Helicase conserved C-terminal domain NIES2134_102320 PF16124 RecQ zinc-binding NIES2134_102350 PF00032 Cytochrome b(C-terminal)/b6/petD NIES2134_102360 PF00033 Cytochrome b/b6/petB NIES2134_102380 PF13458 Periplasmic binding protein NIES2134_102390 PF04461 Protein of unknown function (DUF520) NIES2134_102400 PF11016 Protein of unknown function (DUF2854) NIES2134_102410 PF00012 Hsp70 protein NIES2134_102420 PF00226 DnaJ domain NIES2134_102420 PF01556 DnaJ C terminal domain NIES2134_102420 PF00684 DnaJ central domain NIES2134_102450 PF01029 NusB family NIES2134_102480 PF01761 3-dehydroquinate synthase NIES2134_102490 PF07690 Major Facilitator Superfamily NIES2134_102500 PF00343 Carbohydrate phosphorylase NIES2134_102520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NIES2134_102550 PF03129 Anticodon binding domain NIES2134_102550 PF04073 Aminoacyl-tRNA editing domain NIES2134_102550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES2134_102570 PF00892 EamA-like transporter family NIES2134_102580 PF00149 Calcineurin-like phosphoesterase NIES2134_102590 PF02310 B12 binding domain NIES2134_102590 PF04055 Radical SAM superfamily NIES2134_102590 PF13282 Domain of unknown function (DUF4070) NIES2134_102600 PF01022 Bacterial regulatory protein, arsR family NIES2134_102610 PF00117 Glutamine amidotransferase class-I NIES2134_102610 PF06418 CTP synthase N-terminus NIES2134_102620 PF01888 CbiD NIES2134_102640 PF02896 PEP-utilising enzyme, TIM barrel domain NIES2134_102640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES2134_102640 PF00391 PEP-utilising enzyme, mobile domain NIES2134_102650 PF00171 Aldehyde dehydrogenase family NIES2134_102660 PF08323 Starch synthase catalytic domain NIES2134_102660 PF00534 Glycosyl transferases group 1 NIES2134_102680 PF01628 HrcA protein C terminal domain NIES2134_102680 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NIES2134_102690 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NIES2134_102690 PF00117 Glutamine amidotransferase class-I NIES2134_102700 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_102710 PF00226 DnaJ domain NIES2134_102710 PF01556 DnaJ C terminal domain NIES2134_102710 PF00684 DnaJ central domain NIES2134_102770 PF08264 Anticodon-binding domain of tRNA NIES2134_102770 PF09334 tRNA synthetases class I (M) NIES2134_102790 PF03040 CemA family NIES2134_102870 PF00155 Aminotransferase class I and II NIES2134_102880 PF01411 tRNA synthetases class II (A) NIES2134_102880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIES2134_102880 PF02272 DHHA1 domain NIES2134_102890 PF06750 Bacterial Peptidase A24 N-terminal domain NIES2134_102890 PF01478 Type IV leader peptidase family NIES2134_102920 PF00563 EAL domain NIES2134_102920 PF01590 GAF domain NIES2134_102920 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_102920 PF00360 Phytochrome region NIES2134_102930 PF00202 Aminotransferase class-III NIES2134_102940 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_102940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_102950 PF07688 KaiA C-terminal domain NIES2134_102960 PF07689 KaiB domain NIES2134_102970 PF06745 KaiC NIES2134_102980 PF01513 ATP-NAD kinase NIES2134_103010 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES2134_103040 PF01458 Uncharacterized protein family (UPF0051) NIES2134_103060 PF12697 Alpha/beta hydrolase family NIES2134_103070 PF03912 Psb28 protein NIES2134_103090 PF01220 Dehydroquinase class II NIES2134_103120 PF00027 Cyclic nucleotide-binding domain NIES2134_103120 PF13545 Crp-like helix-turn-helix domain NIES2134_103140 PF00140 Sigma-70 factor, region 1.2 NIES2134_103140 PF04542 Sigma-70 region 2 NIES2134_103140 PF04539 Sigma-70 region 3 NIES2134_103140 PF04545 Sigma-70, region 4 NIES2134_103150 PF08544 GHMP kinases C terminal NIES2134_103150 PF00288 GHMP kinases N terminal domain NIES2134_103160 PF00950 ABC 3 transport family NIES2134_103170 PF00814 Glycoprotease family NIES2134_103180 PF02082 Transcriptional regulator NIES2134_103190 PF00291 Pyridoxal-phosphate dependent enzyme NIES2134_103210 PF00749 tRNA synthetases class I (E and Q), catalytic domain NIES2134_103230 PF05698 Bacterial trigger factor protein (TF) C-terminus NIES2134_103230 PF05697 Bacterial trigger factor protein (TF) NIES2134_103240 PF00574 Clp protease NIES2134_103250 PF07724 AAA domain (Cdc48 subfamily) NIES2134_103250 PF10431 C-terminal, D2-small domain, of ClpB protein NIES2134_103250 PF06689 ClpX C4-type zinc finger NIES2134_103260 PF00106 short chain dehydrogenase NIES2134_103300 PF01209 ubiE/COQ5 methyltransferase family NIES2134_103310 PF00582 Universal stress protein family NIES2134_103340 PF00834 Ribulose-phosphate 3 epimerase family NIES2134_103350 PF01266 FAD dependent oxidoreductase NIES2134_103350 PF05690 Thiazole biosynthesis protein ThiG NIES2134_103370 PF02769 AIR synthase related protein, C-terminal domain NIES2134_103370 PF00586 AIR synthase related protein, N-terminal domain NIES2134_103380 PF00502 Phycobilisome protein NIES2134_103380 PF00427 Phycobilisome Linker polypeptide NIES2134_103390 PF00486 Transcriptional regulatory protein, C terminal NIES2134_103390 PF00072 Response regulator receiver domain NIES2134_103440 PF00679 Elongation factor G C-terminus NIES2134_103440 PF14492 Elongation Factor G, domain II NIES2134_103440 PF03764 Elongation factor G, domain IV NIES2134_103440 PF00009 Elongation factor Tu GTP binding domain NIES2134_103450 PF00535 Glycosyl transferase family 2 NIES2134_103470 PF00155 Aminotransferase class I and II NIES2134_103480 PF00885 6,7-dimethyl-8-ribityllumazine synthase NIES2134_103500 PF05690 Thiazole biosynthesis protein ThiG NIES2134_103530 PF00814 Glycoprotease family NIES2134_103550 PF00149 Calcineurin-like phosphoesterase NIES2134_103570 PF13180 PDZ domain NIES2134_103580 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES2134_103590 PF07650 KH domain NIES2134_103590 PF01926 50S ribosome-binding GTPase NIES2134_103600 PF02472 Biopolymer transport protein ExbD/TolR NIES2134_103610 PF00625 Guanylate kinase NIES2134_103620 PF00005 ABC transporter NIES2134_103640 PF05193 Peptidase M16 inactive domain NIES2134_103640 PF00675 Insulinase (Peptidase family M16) NIES2134_103650 PF01479 S4 domain NIES2134_103650 PF00579 tRNA synthetases class I (W and Y) NIES2134_103660 PF00912 Transglycosylase NIES2134_103660 PF00905 Penicillin binding protein transpeptidase domain NIES2134_103680 PF01475 Ferric uptake regulator family NIES2134_103700 PF02016 LD-carboxypeptidase N-terminal domain NIES2134_103700 PF17676 LD-carboxypeptidase C-terminal domain NIES2134_103710 PF00361 Proton-conducting membrane transporter NIES2134_103720 PF00581 Rhodanese-like domain NIES2134_103720 PF01206 Sulfurtransferase TusA NIES2134_103730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIES2134_103730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIES2134_103740 PF01553 Acyltransferase NIES2134_103740 PF00501 AMP-binding enzyme NIES2134_103740 PF13193 AMP-binding enzyme C-terminal domain NIES2134_103750 PF00698 Acyl transferase domain NIES2134_103760 PF00886 Ribosomal protein S16 NIES2134_103780 PF01165 Ribosomal protein S21 NIES2134_103790 PF02562 PhoH-like protein NIES2134_103800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES2134_103800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES2134_103830 PF04485 Phycobilisome degradation protein nblA NIES2134_103840 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_103840 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NIES2134_103850 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES2134_103850 PF01348 Type II intron maturase NIES2134_103860 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_103860 PF07724 AAA domain (Cdc48 subfamily) NIES2134_103860 PF17871 AAA lid domain NIES2134_103860 PF02861 Clp amino terminal domain, pathogenicity island component NIES2134_103860 PF10431 C-terminal, D2-small domain, of ClpB protein NIES2134_103890 PF03144 Elongation factor Tu domain 2 NIES2134_103890 PF06421 GTP-binding protein LepA C-terminus NIES2134_103890 PF00009 Elongation factor Tu GTP binding domain NIES2134_103890 PF00679 Elongation factor G C-terminus NIES2134_103910 PF02386 Cation transport protein NIES2134_103920 PF00180 Isocitrate/isopropylmalate dehydrogenase NIES2134_103940 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) NIES2134_103960 PF00075 RNase H NIES2134_103970 PF00542 Ribosomal protein L7/L12 C-terminal domain NIES2134_103970 PF16320 Ribosomal protein L7/L12 dimerisation domain NIES2134_103980 PF00466 Ribosomal protein L10 NIES2134_103990 PF00687 Ribosomal protein L1p/L10e family NIES2134_104000 PF03946 Ribosomal protein L11, N-terminal domain NIES2134_104000 PF00298 Ribosomal protein L11, RNA binding domain NIES2134_104010 PF02357 Transcription termination factor nusG NIES2134_104010 PF00467 KOW motif NIES2134_104060 PF00436 Single-strand binding protein family NIES2134_104070 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES2134_104100 PF04715 Anthranilate synthase component I, N terminal region NIES2134_104100 PF00425 chorismate binding enzyme NIES2134_104110 PF02361 Cobalt transport protein NIES2134_104120 PF04012 PspA/IM30 family NIES2134_104140 PF01523 Putative modulator of DNA gyrase NIES2134_104150 PF01126 Heme oxygenase NIES2134_104160 PF14698 Argininosuccinate lyase C-terminal NIES2134_104160 PF00206 Lyase NIES2134_104190 PF00535 Glycosyl transferase family 2 NIES2134_104190 PF13181 Tetratricopeptide repeat NIES2134_104200 PF01565 FAD binding domain NIES2134_104200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NIES2134_104210 PF08245 Mur ligase middle domain NIES2134_104210 PF01225 Mur ligase family, catalytic domain NIES2134_104210 PF02875 Mur ligase family, glutamate ligase domain NIES2134_104240 PF01593 Flavin containing amine oxidoreductase NIES2134_104260 PF01116 Fructose-bisphosphate aldolase class-II NIES2134_104310 PF01169 Uncharacterized protein family UPF0016 NIES2134_104330 PF08486 Stage II sporulation protein NIES2134_104340 PF13439 Glycosyltransferase Family 4 NIES2134_104340 PF00534 Glycosyl transferases group 1 NIES2134_104350 PF00231 ATP synthase NIES2134_104370 PF07282 Putative transposase DNA-binding domain NIES2134_104370 PF01385 Probable transposase NIES2134_104370 PF12323 Helix-turn-helix domain NIES2134_104380 PF01797 Transposase IS200 like NIES2134_104390 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NIES2134_104400 PF00999 Sodium/hydrogen exchanger family NIES2134_104440 PF00005 ABC transporter NIES2134_104440 PF08402 TOBE domain NIES2134_104480 PF01016 Ribosomal L27 protein NIES2134_104490 PF00829 Ribosomal prokaryotic L21 protein NIES2134_104510 PF02082 Transcriptional regulator NIES2134_104540 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES2134_104550 PF02570 Precorrin-8X methylmutase NIES2134_104570 PF01368 DHH family NIES2134_104570 PF02272 DHHA1 domain NIES2134_104570 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NIES2134_104570 PF17768 RecJ OB domain NIES2134_104580 PF01709 Transcriptional regulator NIES2134_104590 PF02533 Photosystem II 4 kDa reaction centre component NIES2134_104600 PF14437 MafB19-like deaminase NIES2134_104610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NIES2134_104620 PF03437 BtpA family NIES2134_104630 PF01634 ATP phosphoribosyltransferase NIES2134_104640 PF13393 Histidyl-tRNA synthetase NIES2134_104650 PF00684 DnaJ central domain NIES2134_104650 PF01556 DnaJ C terminal domain NIES2134_104650 PF00226 DnaJ domain NIES2134_104660 PF01842 ACT domain NIES2134_104660 PF00551 Formyl transferase NIES2134_104670 PF17760 UvrA interaction domain NIES2134_104670 PF17755 UvrA DNA-binding domain NIES2134_104680 PF00118 TCP-1/cpn60 chaperonin family NIES2134_104690 PF00166 Chaperonin 10 Kd subunit NIES2134_104700 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_104710 PF00909 Ammonium Transporter Family NIES2134_104730 PF08245 Mur ligase middle domain NIES2134_104730 PF02875 Mur ligase family, glutamate ligase domain NIES2134_104750 PF01475 Ferric uptake regulator family NIES2134_104780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_104780 PF00672 HAMP domain NIES2134_104780 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_104800 PF07465 Photosystem I protein M (PsaM) NIES2134_104850 PF07549 SecD/SecF GG Motif NIES2134_104850 PF02355 Protein export membrane protein NIES2134_104860 PF07549 SecD/SecF GG Motif NIES2134_104860 PF02355 Protein export membrane protein NIES2134_104870 PF02780 Transketolase, C-terminal domain NIES2134_104870 PF00364 Biotin-requiring enzyme NIES2134_104870 PF02779 Transketolase, pyrimidine binding domain NIES2134_104900 PF00043 Glutathione S-transferase, C-terminal domain NIES2134_104900 PF13417 Glutathione S-transferase, N-terminal domain NIES2134_104920 PF01189 16S rRNA methyltransferase RsmB/F NIES2134_104920 PF01029 NusB family NIES2134_104940 PF02617 ATP-dependent Clp protease adaptor protein ClpS NIES2134_104950 PF00152 tRNA synthetases class II (D, K and N) NIES2134_104950 PF01336 OB-fold nucleic acid binding domain NIES2134_104960 PF17941 Polyphosphate kinase C-terminal domain 1 NIES2134_104960 PF13090 Polyphosphate kinase C-terminal domain 2 NIES2134_104960 PF13089 Polyphosphate kinase N-terminal domain NIES2134_104960 PF02503 Polyphosphate kinase middle domain NIES2134_104970 PF00005 ABC transporter NIES2134_104970 PF00664 ABC transporter transmembrane region NIES2134_104980 PF00977 Histidine biosynthesis protein NIES2134_105000 PF14489 QueF-like protein NIES2134_105020 PF02469 Fasciclin domain NIES2134_105030 PF00171 Aldehyde dehydrogenase family NIES2134_105040 PF06472 ABC transporter transmembrane region 2 NIES2134_105040 PF00005 ABC transporter NIES2134_105060 PF04055 Radical SAM superfamily NIES2134_105070 PF00171 Aldehyde dehydrogenase family NIES2134_105070 PF00465 Iron-containing alcohol dehydrogenase NIES2134_105080 PF03099 Biotin/lipoate A/B protein ligase family NIES2134_105110 PF02445 Quinolinate synthetase A protein NIES2134_105120 PF01593 Flavin containing amine oxidoreductase NIES2134_105130 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NIES2134_105130 PF01502 Phosphoribosyl-AMP cyclohydrolase NIES2134_105160 PF13537 Glutamine amidotransferase domain NIES2134_105160 PF00733 Asparagine synthase NIES2134_105220 PF00535 Glycosyl transferase family 2 NIES2134_105230 PF01728 FtsJ-like methyltransferase NIES2134_105240 PF00534 Glycosyl transferases group 1 NIES2134_105240 PF13439 Glycosyltransferase Family 4 NIES2134_105270 PF13537 Glutamine amidotransferase domain NIES2134_105270 PF00733 Asparagine synthase NIES2134_105360 PF01520 N-acetylmuramoyl-L-alanine amidase NIES2134_105360 PF04122 Putative cell wall binding repeat 2 NIES2134_105400 PF13520 Amino acid permease NIES2134_105410 PF01797 Transposase IS200 like NIES2134_105420 PF12323 Helix-turn-helix domain NIES2134_105420 PF01385 Probable transposase NIES2134_105420 PF07282 Putative transposase DNA-binding domain NIES2134_105430 PF00330 Aconitase family (aconitate hydratase) NIES2134_105430 PF06434 Aconitate hydratase 2 N-terminus NIES2134_105430 PF11791 Aconitate B N-terminal domain NIES2134_105450 PF13614 AAA domain NIES2134_105460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NIES2134_105460 PF01409 tRNA synthetases class II core domain (F) NIES2134_105480 PF01476 LysM domain NIES2134_105480 PF03734 L,D-transpeptidase catalytic domain NIES2134_105500 PF01218 Coproporphyrinogen III oxidase NIES2134_105510 PF05140 ResB-like family NIES2134_105650 PF11805 Protein of unknown function (DUF3326) NIES2134_105660 PF13180 PDZ domain NIES2134_105670 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NIES2134_105680 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NIES2134_105690 PF12838 4Fe-4S dicluster domain NIES2134_105700 PF00146 NADH dehydrogenase NIES2134_105710 PF01979 Amidohydrolase family NIES2134_105720 PF01370 NAD dependent epimerase/dehydratase family NIES2134_105730 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NIES2134_105730 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NIES2134_105730 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NIES2134_105740 PF01351 Ribonuclease HII NIES2134_105750 PF03483 B3/4 domain NIES2134_105750 PF03484 tRNA synthetase B5 domain NIES2134_105750 PF03147 Ferredoxin-fold anticodon binding domain NIES2134_105750 PF01588 Putative tRNA binding domain NIES2134_105750 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NIES2134_105760 PF06968 Biotin and Thiamin Synthesis associated domain NIES2134_105760 PF04055 Radical SAM superfamily NIES2134_105780 PF01385 Probable transposase NIES2134_105780 PF12323 Helix-turn-helix domain NIES2134_105780 PF07282 Putative transposase DNA-binding domain NIES2134_105790 PF01797 Transposase IS200 like NIES2134_105810 PF00398 Ribosomal RNA adenine dimethylase NIES2134_105820 PF03952 Enolase, N-terminal domain NIES2134_105820 PF00113 Enolase, C-terminal TIM barrel domain NIES2134_105830 PF00403 Heavy-metal-associated domain NIES2134_105840 PF00849 RNA pseudouridylate synthase NIES2134_105840 PF01479 S4 domain NIES2134_105860 PF00664 ABC transporter transmembrane region NIES2134_105860 PF00005 ABC transporter NIES2134_105890 PF00773 RNB domain NIES2134_105940 PF00204 DNA gyrase B NIES2134_105940 PF00986 DNA gyrase B subunit, carboxyl terminus NIES2134_105940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_105940 PF01751 Toprim domain NIES2134_105950 PF00849 RNA pseudouridylate synthase NIES2134_105960 PF00529 HlyD membrane-fusion protein of T1SS NIES2134_105960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES2134_105980 PF12704 MacB-like periplasmic core domain NIES2134_105980 PF02687 FtsX-like permease family NIES2134_105980 PF00005 ABC transporter NIES2134_105990 PF04561 RNA polymerase Rpb2, domain 2 NIES2134_105990 PF04565 RNA polymerase Rpb2, domain 3 NIES2134_105990 PF10385 RNA polymerase beta subunit external 1 domain NIES2134_105990 PF00562 RNA polymerase Rpb2, domain 6 NIES2134_105990 PF04560 RNA polymerase Rpb2, domain 7 NIES2134_105990 PF04563 RNA polymerase beta subunit NIES2134_106000 PF00623 RNA polymerase Rpb1, domain 2 NIES2134_106000 PF04983 RNA polymerase Rpb1, domain 3 NIES2134_106000 PF04997 RNA polymerase Rpb1, domain 1 NIES2134_106010 PF05000 RNA polymerase Rpb1, domain 4 NIES2134_106010 PF04998 RNA polymerase Rpb1, domain 5 NIES2134_106010 PF04983 RNA polymerase Rpb1, domain 3 NIES2134_106020 PF01435 Peptidase family M48 NIES2134_106080 PF16363 GDP-mannose 4,6 dehydratase NIES2134_106090 PF01370 NAD dependent epimerase/dehydratase family NIES2134_106130 PF05193 Peptidase M16 inactive domain NIES2134_106130 PF00675 Insulinase (Peptidase family M16) NIES2134_106140 PF00498 FHA domain NIES2134_106140 PF00563 EAL domain NIES2134_106140 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_106170 PF02397 Bacterial sugar transferase NIES2134_106200 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NIES2134_106200 PF02779 Transketolase, pyrimidine binding domain NIES2134_106200 PF02780 Transketolase, C-terminal domain NIES2134_106210 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES2134_106210 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES2134_106260 PF07282 Putative transposase DNA-binding domain NIES2134_106260 PF01385 Probable transposase NIES2134_106260 PF12323 Helix-turn-helix domain NIES2134_106270 PF01797 Transposase IS200 like NIES2134_106290 PF02237 Biotin protein ligase C terminal domain NIES2134_106290 PF03099 Biotin/lipoate A/B protein ligase family NIES2134_106330 PF02660 Glycerol-3-phosphate acyltransferase NIES2134_106340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIES2134_106340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIES2134_106350 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_106370 PF18073 Rubredoxin metal binding domain NIES2134_106370 PF06745 KaiC NIES2134_106380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NIES2134_106420 PF00069 Protein kinase domain NIES2134_106420 PF00805 Pentapeptide repeats (8 copies) NIES2134_106480 PF10726 Protein of function (DUF2518) NIES2134_106510 PF08267 Cobalamin-independent synthase, N-terminal domain NIES2134_106510 PF01717 Cobalamin-independent synthase, Catalytic domain NIES2134_106530 PF00753 Metallo-beta-lactamase superfamily NIES2134_106530 PF01613 Flavin reductase like domain NIES2134_106540 PF02617 ATP-dependent Clp protease adaptor protein ClpS NIES2134_106580 PF01612 3'-5' exonuclease NIES2134_106580 PF00570 HRDC domain NIES2134_106610 PF01791 DeoC/LacD family aldolase NIES2134_106630 PF00633 Helix-hairpin-helix motif NIES2134_106630 PF00730 HhH-GPD superfamily base excision DNA repair protein NIES2134_106630 PF14815 NUDIX domain NIES2134_106640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NIES2134_106660 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) NIES2134_106670 PF16166 Chloroplast import apparatus Tic20-like NIES2134_106690 PF00574 Clp protease NIES2134_106700 PF10017 Histidine-specific methyltransferase, SAM-dependent NIES2134_106710 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_106730 PF00497 Bacterial extracellular solute-binding proteins, family 3 NIES2134_106740 PF00009 Elongation factor Tu GTP binding domain NIES2134_106740 PF11987 Translation-initiation factor 2 NIES2134_106740 PF04760 Translation initiation factor IF-2, N-terminal region NIES2134_106750 PF05239 PRC-barrel domain NIES2134_106750 PF01782 RimM N-terminal domain NIES2134_106800 PF01008 Initiation factor 2 subunit family NIES2134_106840 PF00920 Dehydratase family NIES2134_106850 PF02571 Precorrin-6x reductase CbiJ/CobK NIES2134_106870 PF00248 Aldo/keto reductase family NIES2134_106900 PF11780 Protein of unknown function (DUF3318) NIES2134_106920 PF00421 Photosystem II protein NIES2134_106930 PF00486 Transcriptional regulatory protein, C terminal NIES2134_106930 PF01627 Hpt domain NIES2134_106930 PF00072 Response regulator receiver domain NIES2134_106940 PF00072 Response regulator receiver domain NIES2134_106940 PF00486 Transcriptional regulatory protein, C terminal NIES2134_106950 PF00534 Glycosyl transferases group 1 NIES2134_106950 PF00862 Sucrose synthase NIES2134_106970 PF12697 Alpha/beta hydrolase family NIES2134_106970 PF08241 Methyltransferase domain NIES2134_106980 PF01747 ATP-sulfurylase NIES2134_106980 PF14306 PUA-like domain NIES2134_107000 PF01915 Glycosyl hydrolase family 3 C-terminal domain NIES2134_107000 PF00933 Glycosyl hydrolase family 3 N terminal domain NIES2134_107010 PF00588 SpoU rRNA Methylase family NIES2134_107010 PF08032 RNA 2'-O ribose methyltransferase substrate binding NIES2134_107020 PF02401 LytB protein NIES2134_107030 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NIES2134_107030 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NIES2134_107030 PF13288 DXP reductoisomerase C-terminal domain NIES2134_107060 PF01168 Alanine racemase, N-terminal domain NIES2134_107140 PF01507 Phosphoadenosine phosphosulfate reductase family NIES2134_107150 PF02091 Glycyl-tRNA synthetase alpha subunit NIES2134_107160 PF01522 Polysaccharide deacetylase NIES2134_107180 PF02441 Flavoprotein NIES2134_107200 PF13460 NAD(P)H-binding NIES2134_107220 PF02310 B12 binding domain NIES2134_107220 PF02607 B12 binding domain NIES2134_107220 PF02965 Vitamin B12 dependent methionine synthase, activation domain NIES2134_107220 PF00809 Pterin binding enzyme NIES2134_107220 PF02574 Homocysteine S-methyltransferase NIES2134_107240 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIES2134_107260 PF00535 Glycosyl transferase family 2 NIES2134_107260 PF13181 Tetratricopeptide repeat NIES2134_107270 PF01627 Hpt domain NIES2134_107270 PF18415 Histidine kinase receptor ArcB trans-membrane domain NIES2134_107270 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_107270 PF00072 Response regulator receiver domain NIES2134_107270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_107270 PF00989 PAS fold NIES2134_107280 PF04055 Radical SAM superfamily NIES2134_107300 PF00072 Response regulator receiver domain NIES2134_107300 PF00486 Transcriptional regulatory protein, C terminal NIES2134_107320 PF00149 Calcineurin-like phosphoesterase NIES2134_107330 PF01252 Signal peptidase (SPase) II NIES2134_107340 PF01883 Iron-sulfur cluster assembly protein NIES2134_107340 PF10609 NUBPL iron-transfer P-loop NTPase NIES2134_107350 PF02540 NAD synthase NIES2134_107350 PF00958 GMP synthase C terminal domain NIES2134_107350 PF00117 Glutamine amidotransferase class-I NIES2134_107370 PF06150 ChaB NIES2134_107380 PF00772 DnaB-like helicase N terminal domain NIES2134_107380 PF00772 DnaB-like helicase N terminal domain NIES2134_107380 PF03796 DnaB-like helicase C terminal domain NIES2134_107380 PF14528 LAGLIDADG-like domain NIES2134_107380 PF03796 DnaB-like helicase C terminal domain NIES2134_107380 PF14528 LAGLIDADG-like domain NIES2134_107390 PF03948 Ribosomal protein L9, C-terminal domain NIES2134_107390 PF01281 Ribosomal protein L9, N-terminal domain NIES2134_107400 PF01701 Photosystem I reaction centre subunit IX / PsaJ NIES2134_107410 PF02507 Photosystem I reaction centre subunit III NIES2134_107420 PF00211 Adenylate and Guanylate cyclase catalytic domain NIES2134_107430 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) NIES2134_107440 PF00890 FAD binding domain NIES2134_107440 PF02910 Fumarate reductase flavoprotein C-term NIES2134_107470 PF00796 Photosystem I reaction centre subunit VIII NIES2134_107480 PF02605 Photosystem I reaction centre subunit XI NIES2134_107490 PF00899 ThiF family NIES2134_107490 PF00581 Rhodanese-like domain NIES2134_107530 PF12323 Helix-turn-helix domain NIES2134_107530 PF01385 Probable transposase NIES2134_107530 PF07282 Putative transposase DNA-binding domain NIES2134_107540 PF01797 Transposase IS200 like NIES2134_107560 PF03702 Anhydro-N-acetylmuramic acid kinase NIES2134_107570 PF01256 Carbohydrate kinase NIES2134_107570 PF03853 YjeF-related protein N-terminus NIES2134_107580 PF02934 GatB/GatE catalytic domain NIES2134_107580 PF02637 GatB domain NIES2134_107590 PF00285 Citrate synthase, C-terminal domain NIES2134_107600 PF00148 Nitrogenase component 1 type Oxidoreductase NIES2134_107600 PF08369 Proto-chlorophyllide reductase 57 kD subunit NIES2134_107620 PF05221 S-adenosyl-L-homocysteine hydrolase NIES2134_107620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NIES2134_107640 PF13439 Glycosyltransferase Family 4 NIES2134_107640 PF00534 Glycosyl transferases group 1 NIES2134_107690 PF01609 Transposase DDE domain NIES2134_107700 PF01940 Integral membrane protein DUF92 NIES2134_107710 PF00950 ABC 3 transport family NIES2134_107720 PF12327 FtsZ family, C-terminal domain NIES2134_107720 PF00091 Tubulin/FtsZ family, GTPase domain NIES2134_107770 PF03186 CobD/Cbib protein NIES2134_107780 PF07282 Putative transposase DNA-binding domain NIES2134_107780 PF01385 Probable transposase NIES2134_107780 PF12323 Helix-turn-helix domain NIES2134_107840 PF00224 Pyruvate kinase, barrel domain NIES2134_107840 PF02887 Pyruvate kinase, alpha/beta domain NIES2134_107850 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES2134_107860 PF09115 DNA polymerase III, delta subunit, C terminal NIES2134_107870 PF00571 CBS domain NIES2134_107870 PF01743 Poly A polymerase head domain NIES2134_107900 PF01820 D-ala D-ala ligase N-terminus NIES2134_107900 PF07478 D-ala D-ala ligase C-terminus NIES2134_107920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIES2134_107920 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIES2134_107930 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NIES2134_107930 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NIES2134_107940 PF03462 PCRF domain NIES2134_107940 PF00472 RF-1 domain NIES2134_107950 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_107950 PF17862 AAA+ lid domain NIES2134_107950 PF06480 FtsH Extracellular NIES2134_107950 PF01434 Peptidase family M41 NIES2134_107960 PF01523 Putative modulator of DNA gyrase NIES2134_107970 PF01386 Ribosomal L25p family NIES2134_107980 PF00709 Adenylosuccinate synthetase NIES2134_108000 PF01330 RuvA N terminal domain NIES2134_108000 PF07499 RuvA, C-terminal domain NIES2134_108030 PF01134 Glucose inhibited division protein A NIES2134_108030 PF13932 GidA associated domain NIES2134_108040 PF01774 UreD urease accessory protein NIES2134_108060 PF00999 Sodium/hydrogen exchanger family NIES2134_108060 PF02254 TrkA-N domain NIES2134_108070 PF10128 Glucose-6-phosphate dehydrogenase subunit NIES2134_108070 PF01471 Putative peptidoglycan binding domain NIES2134_108080 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NIES2134_108080 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NIES2134_108090 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NIES2134_108160 PF13581 Histidine kinase-like ATPase domain NIES2134_108170 PF00875 DNA photolyase NIES2134_108170 PF03441 FAD binding domain of DNA photolyase NIES2134_108180 PF07689 KaiB domain NIES2134_108190 PF00437 Type II/IV secretion system protein NIES2134_108210 PF07690 Major Facilitator Superfamily NIES2134_108220 PF00005 ABC transporter NIES2134_108220 PF00664 ABC transporter transmembrane region NIES2134_108250 PF01965 DJ-1/PfpI family NIES2134_108260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES2134_108270 PF01809 Putative membrane protein insertion efficiency factor NIES2134_108280 PF00850 Histone deacetylase domain NIES2134_108310 PF01584 CheW-like domain NIES2134_108310 PF02895 Signal transducing histidine kinase, homodimeric domain NIES2134_108310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_108310 PF01627 Hpt domain NIES2134_108310 PF00072 Response regulator receiver domain NIES2134_108330 PF00072 Response regulator receiver domain NIES2134_108340 PF00072 Response regulator receiver domain NIES2134_108340 PF14332 Domain of unknown function (DUF4388) NIES2134_108350 PF00395 S-layer homology domain NIES2134_108350 PF04966 Carbohydrate-selective porin, OprB family NIES2134_108360 PF04055 Radical SAM superfamily NIES2134_108370 PF00106 short chain dehydrogenase NIES2134_108380 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NIES2134_108380 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NIES2134_108390 PF00664 ABC transporter transmembrane region NIES2134_108390 PF00005 ABC transporter NIES2134_108400 PF00128 Alpha amylase, catalytic domain NIES2134_108400 PF02806 Alpha amylase, C-terminal all-beta domain NIES2134_108400 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NIES2134_108410 PF01180 Dihydroorotate dehydrogenase NIES2134_108430 PF00005 ABC transporter NIES2134_108440 PF00862 Sucrose synthase NIES2134_108440 PF00534 Glycosyl transferases group 1 NIES2134_108450 PF02896 PEP-utilising enzyme, TIM barrel domain NIES2134_108450 PF00391 PEP-utilising enzyme, mobile domain NIES2134_108450 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NIES2134_108460 PF13291 ACT domain NIES2134_108460 PF04607 Region found in RelA / SpoT proteins NIES2134_108460 PF02824 TGS domain NIES2134_108480 PF00731 AIR carboxylase NIES2134_108490 PF08331 Domain of unknown function (DUF1730) NIES2134_108510 PF00072 Response regulator receiver domain NIES2134_108510 PF00486 Transcriptional regulatory protein, C terminal NIES2134_108530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NIES2134_108530 PF08501 Shikimate dehydrogenase substrate binding domain NIES2134_108540 PF00543 Nitrogen regulatory protein P-II NIES2134_108550 PF03725 3' exoribonuclease family, domain 2 NIES2134_108550 PF01138 3' exoribonuclease family, domain 1 NIES2134_108570 PF13335 Magnesium chelatase, subunit ChlI C-terminal NIES2134_108570 PF01078 Magnesium chelatase, subunit ChlI NIES2134_108590 PF06463 Molybdenum Cofactor Synthesis C NIES2134_108590 PF04055 Radical SAM superfamily NIES2134_108600 PF10150 Ribonuclease E/G family NIES2134_108610 PF04960 Glutaminase NIES2134_108630 PF02096 60Kd inner membrane protein NIES2134_108640 PF00825 Ribonuclease P NIES2134_108650 PF00468 Ribosomal protein L34 NIES2134_108660 PF08299 Bacterial dnaA protein helix-turn-helix NIES2134_108660 PF11638 DnaA N-terminal domain NIES2134_108660 PF00308 Bacterial dnaA protein NIES2134_108670 PF07282 Putative transposase DNA-binding domain NIES2134_108670 PF01385 Probable transposase NIES2134_108670 PF12323 Helix-turn-helix domain NIES2134_108680 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NIES2134_108750 PF00483 Nucleotidyl transferase NIES2134_108760 PF03773 Predicted permease NIES2134_108770 PF04055 Radical SAM superfamily NIES2134_108770 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NIES2134_108780 PF00210 Ferritin-like domain NIES2134_108810 PF04539 Sigma-70 region 3 NIES2134_108810 PF00140 Sigma-70 factor, region 1.2 NIES2134_108810 PF04542 Sigma-70 region 2 NIES2134_108810 PF04545 Sigma-70, region 4 NIES2134_108830 PF00005 ABC transporter NIES2134_108840 PF01425 Amidase NIES2134_108860 PF12631 MnmE helical domain NIES2134_108860 PF10396 GTP-binding protein TrmE N-terminus NIES2134_108860 PF01926 50S ribosome-binding GTPase NIES2134_108900 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES2134_108920 PF07963 Prokaryotic N-terminal methylation motif NIES2134_108920 PF08334 Type II secretion system (T2SS), protein G NIES2134_108940 PF12838 4Fe-4S dicluster domain NIES2134_108960 PF00535 Glycosyl transferase family 2 NIES2134_108970 PF02069 Prokaryotic metallothionein NIES2134_108980 PF01022 Bacterial regulatory protein, arsR family NIES2134_108990 PF14245 Type IV pilin PilA NIES2134_108990 PF07963 Prokaryotic N-terminal methylation motif NIES2134_109010 PF00072 Response regulator receiver domain NIES2134_109010 PF01627 Hpt domain NIES2134_109010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_109010 PF01584 CheW-like domain NIES2134_109020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NIES2134_109020 PF01590 GAF domain NIES2134_109040 PF00072 Response regulator receiver domain NIES2134_109050 PF00072 Response regulator receiver domain NIES2134_109060 PF01758 Sodium Bile acid symporter family NIES2134_109080 PF00005 ABC transporter NIES2134_109090 PF00005 ABC transporter NIES2134_109090 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES2134_109100 PF02653 Branched-chain amino acid transport system / permease component NIES2134_109110 PF02653 Branched-chain amino acid transport system / permease component NIES2134_109130 PF01230 HIT domain NIES2134_109140 PF04551 GcpE protein NIES2134_109150 PF01501 Glycosyl transferase family 8 NIES2134_109150 PF00535 Glycosyl transferase family 2 NIES2134_109170 PF01531 Glycosyl transferase family 11 NIES2134_109180 PF00535 Glycosyl transferase family 2 NIES2134_109190 PF00535 Glycosyl transferase family 2 NIES2134_109200 PF01207 Dihydrouridine synthase (Dus) NIES2134_109210 PF01228 Glycine radical NIES2134_109210 PF02901 Pyruvate formate lyase-like NIES2134_109240 PF03193 RsgA GTPase NIES2134_109260 PF00571 CBS domain NIES2134_109260 PF03471 Transporter associated domain NIES2134_109260 PF01595 Cyclin M transmembrane N-terminal domain NIES2134_109280 PF02597 ThiS family NIES2134_109290 PF00291 Pyridoxal-phosphate dependent enzyme NIES2134_109300 PF00547 Urease, gamma subunit NIES2134_109310 PF01812 5-formyltetrahydrofolate cyclo-ligase family NIES2134_109320 PF02754 Cysteine-rich domain NIES2134_109330 PF00438 S-adenosylmethionine synthetase, N-terminal domain NIES2134_109330 PF02772 S-adenosylmethionine synthetase, central domain NIES2134_109330 PF02773 S-adenosylmethionine synthetase, C-terminal domain NIES2134_109370 PF00092 von Willebrand factor type A domain NIES2134_109390 PF00092 von Willebrand factor type A domain NIES2134_109460 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NIES2134_109460 PF00953 Glycosyl transferase family 4 NIES2134_109470 PF00107 Zinc-binding dehydrogenase NIES2134_109470 PF08240 Alcohol dehydrogenase GroES-like domain NIES2134_109480 PF06725 3D domain NIES2134_109480 PF03562 MltA specific insert domain NIES2134_109510 PF00121 Triosephosphate isomerase NIES2134_109530 PF13614 AAA domain NIES2134_109540 PF00005 ABC transporter NIES2134_109540 PF00664 ABC transporter transmembrane region NIES2134_109550 PF12631 MnmE helical domain NIES2134_109550 PF10396 GTP-binding protein TrmE N-terminus NIES2134_109550 PF01926 50S ribosome-binding GTPase NIES2134_109560 PF01333 Apocytochrome F, C-terminal NIES2134_109560 PF16639 Apocytochrome F, N-terminal NIES2134_109570 PF00355 Rieske [2Fe-2S] domain NIES2134_109590 PF00502 Phycobilisome protein NIES2134_109600 PF00502 Phycobilisome protein NIES2134_109610 PF01383 CpcD/allophycocyanin linker domain NIES2134_109620 PF00936 BMC domain NIES2134_109630 PF00902 Sec-independent protein translocase protein (TatC) NIES2134_109640 PF17757 UvrB interaction domain NIES2134_109640 PF03461 TRCF domain NIES2134_109640 PF00271 Helicase conserved C-terminal domain NIES2134_109640 PF00270 DEAD/DEAH box helicase NIES2134_109640 PF02559 CarD-like/TRCF domain NIES2134_109650 PF01385 Probable transposase NIES2134_109650 PF12323 Helix-turn-helix domain NIES2134_109650 PF07282 Putative transposase DNA-binding domain NIES2134_109660 PF04321 RmlD substrate binding domain NIES2134_109670 PF03109 ABC1 family NIES2134_109700 PF00936 BMC domain NIES2134_109710 PF00936 BMC domain NIES2134_109720 PF03319 Ethanolamine utilisation protein EutN/carboxysome NIES2134_109730 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_109730 PF00101 Ribulose bisphosphate carboxylase, small chain NIES2134_109750 PF05958 tRNA (Uracil-5-)-methyltransferase NIES2134_109750 PF01938 TRAM domain NIES2134_109830 PF03040 CemA family NIES2134_109850 PF01464 Transglycosylase SLT domain NIES2134_109850 PF14718 Soluble lytic murein transglycosylase L domain NIES2134_109890 PF00155 Aminotransferase class I and II NIES2134_109900 PF02881 SRP54-type protein, helical bundle domain NIES2134_109900 PF00448 SRP54-type protein, GTPase domain NIES2134_109910 PF00459 Inositol monophosphatase family NIES2134_109920 PF00005 ABC transporter NIES2134_109920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIES2134_109930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_109930 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_109930 PF00989 PAS fold NIES2134_109940 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_109940 PF00563 EAL domain NIES2134_109940 PF01590 GAF domain NIES2134_109940 PF00360 Phytochrome region NIES2134_109960 PF02547 Queuosine biosynthesis protein NIES2134_109980 PF00795 Carbon-nitrogen hydrolase NIES2134_110000 PF00561 alpha/beta hydrolase fold NIES2134_110030 PF12706 Beta-lactamase superfamily domain NIES2134_110050 PF01385 Probable transposase NIES2134_110050 PF12323 Helix-turn-helix domain NIES2134_110050 PF07282 Putative transposase DNA-binding domain NIES2134_110060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES2134_110060 PF01348 Type II intron maturase NIES2134_110070 PF00266 Aminotransferase class-V NIES2134_110090 PF00563 EAL domain NIES2134_110090 PF03707 Bacterial signalling protein N terminal repeat NIES2134_110090 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_110110 PF00330 Aconitase family (aconitate hydratase) NIES2134_110120 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NIES2134_110120 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NIES2134_110130 PF00462 Glutaredoxin NIES2134_110150 PF00361 Proton-conducting membrane transporter NIES2134_110160 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NIES2134_110160 PF00361 Proton-conducting membrane transporter NIES2134_110160 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NIES2134_110190 PF02632 BioY family NIES2134_110200 PF02514 CobN/Magnesium Chelatase NIES2134_110210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_110210 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_110220 PF01121 Dephospho-CoA kinase NIES2134_110250 PF04055 Radical SAM superfamily NIES2134_110270 PF02627 Carboxymuconolactone decarboxylase family NIES2134_110280 PF00005 ABC transporter NIES2134_110290 PF05050 Methyltransferase FkbM domain NIES2134_110300 PF00005 ABC transporter NIES2134_110330 PF13193 AMP-binding enzyme C-terminal domain NIES2134_110330 PF16177 Acetyl-coenzyme A synthetase N-terminus NIES2134_110330 PF00501 AMP-binding enzyme NIES2134_110350 PF01625 Peptide methionine sulfoxide reductase NIES2134_110380 PF01202 Shikimate kinase NIES2134_110390 PF01556 DnaJ C terminal domain NIES2134_110390 PF00684 DnaJ central domain NIES2134_110390 PF00226 DnaJ domain NIES2134_110400 PF10369 Small subunit of acetolactate synthase NIES2134_110420 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIES2134_110420 PF01926 50S ribosome-binding GTPase NIES2134_110430 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES2134_110430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_110430 PF01627 Hpt domain NIES2134_110430 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_110430 PF00672 HAMP domain NIES2134_110430 PF00072 Response regulator receiver domain NIES2134_110440 PF01722 BolA-like protein NIES2134_110450 PF00462 Glutaredoxin NIES2134_110460 PF00011 Hsp20/alpha crystallin family NIES2134_110500 PF04015 Domain of unknown function (DUF362) NIES2134_110510 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES2134_110510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES2134_110520 PF01521 Iron-sulphur cluster biosynthesis NIES2134_110580 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NIES2134_110600 PF05368 NmrA-like family NIES2134_110610 PF01513 ATP-NAD kinase NIES2134_110620 PF12826 Helix-hairpin-helix motif NIES2134_110620 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NIES2134_110620 PF03120 NAD-dependent DNA ligase OB-fold domain NIES2134_110620 PF01653 NAD-dependent DNA ligase adenylation domain NIES2134_110620 PF00533 BRCA1 C Terminus (BRCT) domain NIES2134_110680 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_110680 PF06426 Serine acetyltransferase, N-terminal NIES2134_110690 PF08502 LeuA allosteric (dimerisation) domain NIES2134_110690 PF00682 HMGL-like NIES2134_110740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NIES2134_110740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NIES2134_110750 PF02504 Fatty acid synthesis protein NIES2134_110760 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_110810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NIES2134_110830 PF06298 Photosystem II protein Y (PsbY) NIES2134_110860 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NIES2134_110860 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NIES2134_110870 PF03099 Biotin/lipoate A/B protein ligase family NIES2134_110880 PF00140 Sigma-70 factor, region 1.2 NIES2134_110880 PF04542 Sigma-70 region 2 NIES2134_110880 PF04539 Sigma-70 region 3 NIES2134_110880 PF04545 Sigma-70, region 4 NIES2134_110900 PF00924 Mechanosensitive ion channel NIES2134_110900 PF12794 Mechanosensitive ion channel inner membrane domain 1 NIES2134_110900 PF12795 Mechanosensitive ion channel porin domain NIES2134_110920 PF03742 PetN NIES2134_110940 PF03485 Arginyl tRNA synthetase N terminal domain NIES2134_110940 PF00750 tRNA synthetases class I (R) NIES2134_110940 PF05746 DALR anticodon binding domain NIES2134_110950 PF00692 dUTPase NIES2134_110960 PF01926 50S ribosome-binding GTPase NIES2134_110960 PF12631 MnmE helical domain NIES2134_110960 PF10396 GTP-binding protein TrmE N-terminus NIES2134_110990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NIES2134_111000 PF01297 Zinc-uptake complex component A periplasmic NIES2134_111010 PF00005 ABC transporter NIES2134_111020 PF01916 Deoxyhypusine synthase NIES2134_111050 PF00462 Glutaredoxin NIES2134_111050 PF08534 Redoxin NIES2134_111060 PF12323 Helix-turn-helix domain NIES2134_111060 PF01385 Probable transposase NIES2134_111060 PF07282 Putative transposase DNA-binding domain NIES2134_111080 PF03949 Malic enzyme, NAD binding domain NIES2134_111080 PF00390 Malic enzyme, N-terminal domain NIES2134_111100 PF00999 Sodium/hydrogen exchanger family NIES2134_111100 PF03471 Transporter associated domain NIES2134_111110 PF10693 Protein of unknown function (DUF2499) NIES2134_111120 PF08240 Alcohol dehydrogenase GroES-like domain NIES2134_111120 PF00107 Zinc-binding dehydrogenase NIES2134_111140 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES2134_111150 PF00226 DnaJ domain NIES2134_111150 PF00684 DnaJ central domain NIES2134_111150 PF01556 DnaJ C terminal domain NIES2134_111170 PF02481 DNA recombination-mediator protein A NIES2134_111170 PF17782 DprA winged helix domain NIES2134_111180 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NIES2134_111190 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NIES2134_111200 PF00294 pfkB family carbohydrate kinase NIES2134_111220 PF02915 Rubrerythrin NIES2134_111250 PF01738 Dienelactone hydrolase family NIES2134_111300 PF01891 Cobalt uptake substrate-specific transmembrane region NIES2134_111320 PF08041 PetM family of cytochrome b6f complex subunit 7 NIES2134_111340 PF17863 AAA lid domain NIES2134_111340 PF01078 Magnesium chelatase, subunit ChlI NIES2134_111340 PF13519 von Willebrand factor type A domain NIES2134_111350 PF00118 TCP-1/cpn60 chaperonin family NIES2134_111360 PF00188 Cysteine-rich secretory protein family NIES2134_111390 PF00696 Amino acid kinase family NIES2134_111410 PF03572 Peptidase family S41 NIES2134_111410 PF00595 PDZ domain NIES2134_111420 PF16916 Dimerisation domain of Zinc Transporter NIES2134_111420 PF01545 Cation efflux family NIES2134_111430 PF01494 FAD binding domain NIES2134_111440 PF01070 FMN-dependent dehydrogenase NIES2134_111460 PF13230 Glutamine amidotransferases class-II NIES2134_111490 PF01903 CbiX NIES2134_111500 PF08502 LeuA allosteric (dimerisation) domain NIES2134_111500 PF00682 HMGL-like NIES2134_111520 PF13614 AAA domain NIES2134_111550 PF12697 Alpha/beta hydrolase family NIES2134_111560 PF02633 Creatinine amidohydrolase NIES2134_111580 PF17871 AAA lid domain NIES2134_111580 PF02861 Clp amino terminal domain, pathogenicity island component NIES2134_111580 PF10431 C-terminal, D2-small domain, of ClpB protein NIES2134_111580 PF07724 AAA domain (Cdc48 subfamily) NIES2134_111580 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_111590 PF02392 Ycf4 NIES2134_111600 PF02468 Photosystem II reaction centre N protein (psbN) NIES2134_111610 PF00737 Photosystem II 10 kDa phosphoprotein NIES2134_111620 PF02416 mttA/Hcf106 family NIES2134_111630 PF01195 Peptidyl-tRNA hydrolase NIES2134_111640 PF12704 MacB-like periplasmic core domain NIES2134_111640 PF02687 FtsX-like permease family NIES2134_111640 PF00005 ABC transporter NIES2134_111660 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_111710 PF02080 TrkA-C domain NIES2134_111710 PF00999 Sodium/hydrogen exchanger family NIES2134_111710 PF02254 TrkA-N domain NIES2134_111720 PF00890 FAD binding domain NIES2134_111720 PF02910 Fumarate reductase flavoprotein C-term NIES2134_111740 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NIES2134_111750 PF07282 Putative transposase DNA-binding domain NIES2134_111750 PF01385 Probable transposase NIES2134_111750 PF12323 Helix-turn-helix domain NIES2134_111760 PF01613 Flavin reductase like domain NIES2134_111760 PF00258 Flavodoxin NIES2134_111790 PF01370 NAD dependent epimerase/dehydratase family NIES2134_111800 PF03989 DNA gyrase C-terminal domain, beta-propeller NIES2134_111800 PF00521 DNA gyrase/topoisomerase IV, subunit A NIES2134_111810 PF00310 Glutamine amidotransferases class-II NIES2134_111810 PF04898 Glutamate synthase central domain NIES2134_111810 PF01645 Conserved region in glutamate synthase NIES2134_111810 PF01493 GXGXG motif NIES2134_111820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_111820 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_111820 PF09308 LuxQ, periplasmic NIES2134_111820 PF00072 Response regulator receiver domain NIES2134_111830 PF02814 UreE urease accessory protein, N-terminal domain NIES2134_111830 PF05194 UreE urease accessory protein, C-terminal domain NIES2134_111840 PF01730 UreF NIES2134_111850 PF00994 Probable molybdopterin binding domain NIES2134_111850 PF03454 MoeA C-terminal region (domain IV) NIES2134_111850 PF03453 MoeA N-terminal region (domain I and II) NIES2134_111860 PF06463 Molybdenum Cofactor Synthesis C NIES2134_111860 PF04055 Radical SAM superfamily NIES2134_111870 PF12804 MobA-like NTP transferase domain NIES2134_111870 PF01967 MoaC family NIES2134_111880 PF02597 ThiS family NIES2134_111890 PF02391 MoaE protein NIES2134_111900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES2134_111900 PF03466 LysR substrate binding domain NIES2134_111910 PF02885 Glycosyl transferase family, helical bundle domain NIES2134_111910 PF00591 Glycosyl transferase family, a/b domain NIES2134_111940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NIES2134_111940 PF01568 Molydopterin dinucleotide binding domain NIES2134_111940 PF00384 Molybdopterin oxidoreductase NIES2134_111950 PF00005 ABC transporter NIES2134_111960 PF00005 ABC transporter NIES2134_111970 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_111990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES2134_111990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NIES2134_112010 PF00535 Glycosyl transferase family 2 NIES2134_112050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIES2134_112060 PF05523 WxcM-like, C-terminal NIES2134_112110 PF01061 ABC-2 type transporter NIES2134_112110 PF00005 ABC transporter NIES2134_112110 PF00498 FHA domain NIES2134_112140 PF01612 3'-5' exonuclease NIES2134_112140 PF01367 5'-3' exonuclease, C-terminal SAM fold NIES2134_112140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NIES2134_112140 PF00476 DNA polymerase family A NIES2134_112150 PF00675 Insulinase (Peptidase family M16) NIES2134_112150 PF05193 Peptidase M16 inactive domain NIES2134_112160 PF02654 Cobalamin-5-phosphate synthase NIES2134_112220 PF00155 Aminotransferase class I and II NIES2134_112230 PF00072 Response regulator receiver domain NIES2134_112230 PF00486 Transcriptional regulatory protein, C terminal NIES2134_112240 PF00498 FHA domain NIES2134_112240 PF00005 ABC transporter NIES2134_112240 PF01061 ABC-2 type transporter NIES2134_112250 PF00202 Aminotransferase class-III NIES2134_112260 PF17975 Ribonucleotide reductase alpha domain NIES2134_112270 PF00069 Protein kinase domain NIES2134_112270 PF00805 Pentapeptide repeats (8 copies) NIES2134_112340 PF11862 Domain of unknown function (DUF3382) NIES2134_112340 PF02653 Branched-chain amino acid transport system / permease component NIES2134_112350 PF00005 ABC transporter NIES2134_112350 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES2134_112360 PF08275 DNA primase catalytic core, N-terminal domain NIES2134_112360 PF01807 CHC2 zinc finger NIES2134_112360 PF10410 DnaB-helicase binding domain of primase NIES2134_112380 PF00365 Phosphofructokinase NIES2134_112390 PF04055 Radical SAM superfamily NIES2134_112390 PF01938 TRAM domain NIES2134_112390 PF00919 Uncharacterized protein family UPF0004 NIES2134_112400 PF01025 GrpE NIES2134_112420 PF11266 Long-chain fatty aldehyde decarbonylase NIES2134_112430 PF01488 Shikimate / quinate 5-dehydrogenase NIES2134_112440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NIES2134_112460 PF01227 GTP cyclohydrolase I NIES2134_112480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES2134_112480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NIES2134_112510 PF00571 CBS domain NIES2134_112510 PF02163 Peptidase family M50 NIES2134_112530 PF01245 Ribosomal protein L19 NIES2134_112540 PF02545 Maf-like protein NIES2134_112550 PF00501 AMP-binding enzyme NIES2134_112570 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NIES2134_112570 PF00364 Biotin-requiring enzyme NIES2134_112570 PF02817 e3 binding domain NIES2134_112580 PF00005 ABC transporter NIES2134_112590 PF02638 Glycosyl hydrolase-like 10 NIES2134_112600 PF00205 Thiamine pyrophosphate enzyme, central domain NIES2134_112600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES2134_112600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES2134_112610 PF00364 Biotin-requiring enzyme NIES2134_112620 PF01132 Elongation factor P (EF-P) OB domain NIES2134_112620 PF09285 Elongation factor P, C-terminal NIES2134_112620 PF08207 Elongation factor P (EF-P) KOW-like domain NIES2134_112630 PF01106 NifU-like domain NIES2134_112650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NIES2134_112660 PF01926 50S ribosome-binding GTPase NIES2134_112660 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NIES2134_112690 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NIES2134_112700 PF00483 Nucleotidyl transferase NIES2134_112720 PF14495 Cytochrome c-550 domain NIES2134_112730 PF14495 Cytochrome c-550 domain NIES2134_112740 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NIES2134_112750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_112750 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_112750 PF01627 Hpt domain NIES2134_112750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NIES2134_112750 PF00672 HAMP domain NIES2134_112750 PF00072 Response regulator receiver domain NIES2134_112760 PF01048 Phosphorylase superfamily NIES2134_112780 PF01250 Ribosomal protein S6 NIES2134_112790 PF01557 Fumarylacetoacetate (FAA) hydrolase family NIES2134_112810 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NIES2134_112820 PF01066 CDP-alcohol phosphatidyltransferase NIES2134_112840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NIES2134_112880 PF09150 Orange carotenoid protein, N-terminal NIES2134_112910 PF00300 Histidine phosphatase superfamily (branch 1) NIES2134_112940 PF00072 Response regulator receiver domain NIES2134_112940 PF00486 Transcriptional regulatory protein, C terminal NIES2134_112990 PF01467 Cytidylyltransferase-like NIES2134_113010 PF04168 A predicted alpha-helical domain with a conserved ER motif. NIES2134_113010 PF14403 Circularly permuted ATP-grasp type 2 NIES2134_113030 PF00676 Dehydrogenase E1 component NIES2134_113050 PF13580 SIS domain NIES2134_113080 PF01385 Probable transposase NIES2134_113080 PF07282 Putative transposase DNA-binding domain NIES2134_113080 PF12323 Helix-turn-helix domain NIES2134_113100 PF13378 Enolase C-terminal domain-like NIES2134_113120 PF12323 Helix-turn-helix domain NIES2134_113120 PF07282 Putative transposase DNA-binding domain NIES2134_113120 PF01385 Probable transposase NIES2134_113130 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NIES2134_113130 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NIES2134_113140 PF01467 Cytidylyltransferase-like NIES2134_113160 PF00795 Carbon-nitrogen hydrolase NIES2134_113160 PF02540 NAD synthase NIES2134_113170 PF01432 Peptidase family M3 NIES2134_113180 PF01551 Peptidase family M23 NIES2134_113190 PF03717 Penicillin-binding Protein dimerisation domain NIES2134_113190 PF00905 Penicillin binding protein transpeptidase domain NIES2134_113210 PF00977 Histidine biosynthesis protein NIES2134_113220 PF09363 XFP C-terminal domain NIES2134_113220 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase NIES2134_113220 PF09364 XFP N-terminal domain NIES2134_113240 PF01026 TatD related DNase NIES2134_113250 PF01649 Ribosomal protein S20 NIES2134_113260 PF00731 AIR carboxylase NIES2134_113280 PF00183 Hsp90 protein NIES2134_113290 PF04055 Radical SAM superfamily NIES2134_113300 PF03699 Uncharacterised protein family (UPF0182) NIES2134_113310 PF00578 AhpC/TSA family NIES2134_113320 PF13181 Tetratricopeptide repeat NIES2134_113320 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NIES2134_113340 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_113350 PF00578 AhpC/TSA family NIES2134_113370 PF10609 NUBPL iron-transfer P-loop NTPase NIES2134_113380 PF01370 NAD dependent epimerase/dehydratase family NIES2134_113390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NIES2134_113390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NIES2134_113390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NIES2134_113400 PF13439 Glycosyltransferase Family 4 NIES2134_113400 PF00534 Glycosyl transferases group 1 NIES2134_113430 PF00069 Protein kinase domain NIES2134_113430 PF00805 Pentapeptide repeats (8 copies) NIES2134_113440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES2134_113440 PF03466 LysR substrate binding domain NIES2134_113450 PF00312 Ribosomal protein S15 NIES2134_113480 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_113490 PF00175 Oxidoreductase NAD-binding domain NIES2134_113490 PF01383 CpcD/allophycocyanin linker domain NIES2134_113490 PF00970 Oxidoreductase FAD-binding domain NIES2134_113510 PF00425 chorismate binding enzyme NIES2134_113520 PF01641 SelR domain NIES2134_113530 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB NIES2134_113530 PF00672 HAMP domain NIES2134_113530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_113530 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_113530 PF08448 PAS fold NIES2134_113540 PF04472 Cell division protein SepF NIES2134_113550 PF14748 Pyrroline-5-carboxylate reductase dimerisation NIES2134_113550 PF03807 NADP oxidoreductase coenzyme F420-dependent NIES2134_113570 PF00701 Dihydrodipicolinate synthetase family NIES2134_113580 PF00753 Metallo-beta-lactamase superfamily NIES2134_113580 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NIES2134_113580 PF17770 Ribonuclease J C-terminal domain NIES2134_113590 PF00501 AMP-binding enzyme NIES2134_113590 PF13193 AMP-binding enzyme C-terminal domain NIES2134_113610 PF00690 Cation transporter/ATPase, N-terminus NIES2134_113610 PF00689 Cation transporting ATPase, C-terminus NIES2134_113620 PF00690 Cation transporter/ATPase, N-terminus NIES2134_113620 PF00689 Cation transporting ATPase, C-terminus NIES2134_113640 PF05860 haemagglutination activity domain NIES2134_113660 PF00690 Cation transporter/ATPase, N-terminus NIES2134_113660 PF00689 Cation transporting ATPase, C-terminus NIES2134_113670 PF00291 Pyridoxal-phosphate dependent enzyme NIES2134_113690 PF00291 Pyridoxal-phosphate dependent enzyme NIES2134_113700 PF00300 Histidine phosphatase superfamily (branch 1) NIES2134_113730 PF00962 Adenosine/AMP deaminase NIES2134_113740 PF00694 Aconitase C-terminal domain NIES2134_113760 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES2134_113770 PF01380 SIS domain NIES2134_113790 PF01225 Mur ligase family, catalytic domain NIES2134_113790 PF02875 Mur ligase family, glutamate ligase domain NIES2134_113790 PF08245 Mur ligase middle domain NIES2134_113810 PF02540 NAD synthase NIES2134_113820 PF05969 Photosystem II complex subunit Ycf12 NIES2134_113830 PF01368 DHH family NIES2134_113830 PF10141 Single-strand DNA-specific exonuclease, C terminal domain NIES2134_113830 PF17768 RecJ OB domain NIES2134_113830 PF02272 DHHA1 domain NIES2134_113840 PF00395 S-layer homology domain NIES2134_113840 PF04966 Carbohydrate-selective porin, OprB family NIES2134_113890 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES2134_113890 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES2134_113910 PF01189 16S rRNA methyltransferase RsmB/F NIES2134_113910 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NIES2134_113910 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NIES2134_113930 PF11897 Protein of unknown function (DUF3417) NIES2134_113930 PF00343 Carbohydrate phosphorylase NIES2134_113940 PF00005 ABC transporter NIES2134_113940 PF01061 ABC-2 type transporter NIES2134_113940 PF00498 FHA domain NIES2134_113970 PF00583 Acetyltransferase (GNAT) family NIES2134_113970 PF13380 CoA binding domain NIES2134_113970 PF13607 Succinyl-CoA ligase like flavodoxin domain NIES2134_113980 PF02222 ATP-grasp domain NIES2134_113980 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NIES2134_114010 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_114020 PF12323 Helix-turn-helix domain NIES2134_114020 PF01385 Probable transposase NIES2134_114020 PF07282 Putative transposase DNA-binding domain NIES2134_114040 PF01926 50S ribosome-binding GTPase NIES2134_114050 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain NIES2134_114050 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain NIES2134_114060 PF02341 RbcX protein NIES2134_114070 PF00101 Ribulose bisphosphate carboxylase, small chain NIES2134_114080 PF08264 Anticodon-binding domain of tRNA NIES2134_114080 PF00133 tRNA synthetases class I (I, L, M and V) NIES2134_114080 PF10458 Valyl tRNA synthetase tRNA binding arm NIES2134_114120 PF10674 Protein of unknown function (DUF2488) NIES2134_114130 PF00400 WD domain, G-beta repeat NIES2134_114150 PF01259 SAICAR synthetase NIES2134_114160 PF02685 Glucokinase NIES2134_114190 PF12857 TOBE-like domain NIES2134_114190 PF00005 ABC transporter NIES2134_114200 PF17092 Penicillin-binding protein OB-like domain NIES2134_114200 PF00912 Transglycosylase NIES2134_114200 PF00905 Penicillin binding protein transpeptidase domain NIES2134_114210 PF00436 Single-strand binding protein family NIES2134_114220 PF07282 Putative transposase DNA-binding domain NIES2134_114220 PF12323 Helix-turn-helix domain NIES2134_114220 PF01385 Probable transposase NIES2134_114250 PF17863 AAA lid domain NIES2134_114250 PF01078 Magnesium chelatase, subunit ChlI NIES2134_114270 PF05175 Methyltransferase small domain NIES2134_114280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES2134_114290 PF04055 Radical SAM superfamily NIES2134_114310 PF02941 Ferredoxin thioredoxin reductase variable alpha chain NIES2134_114330 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NIES2134_114330 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NIES2134_114340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIES2134_114340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIES2134_114340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIES2134_114340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIES2134_114360 PF00809 Pterin binding enzyme NIES2134_114380 PF02686 Glu-tRNAGln amidotransferase C subunit NIES2134_114390 PF13176 Tetratricopeptide repeat NIES2134_114390 PF00515 Tetratricopeptide repeat NIES2134_114400 PF00582 Universal stress protein family NIES2134_114440 PF00421 Photosystem II protein NIES2134_114450 PF01405 Photosystem II reaction centre T protein NIES2134_114460 PF00300 Histidine phosphatase superfamily (branch 1) NIES2134_114480 PF10415 Fumarase C C-terminus NIES2134_114480 PF00206 Lyase NIES2134_114510 PF00117 Glutamine amidotransferase class-I NIES2134_114520 PF00498 FHA domain NIES2134_114540 PF00849 RNA pseudouridylate synthase NIES2134_114540 PF01479 S4 domain NIES2134_114550 PF01040 UbiA prenyltransferase family NIES2134_114560 PF00069 Protein kinase domain NIES2134_114560 PF00805 Pentapeptide repeats (8 copies) NIES2134_114570 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits NIES2134_114570 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit NIES2134_114580 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits NIES2134_114590 PF02419 PsbL protein NIES2134_114600 PF01788 PsbJ NIES2134_114610 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_114620 PF14572 Phosphoribosyl synthetase-associated domain NIES2134_114620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NIES2134_114630 PF02142 MGS-like domain NIES2134_114630 PF01808 AICARFT/IMPCHase bienzyme NIES2134_114670 PF00502 Phycobilisome protein NIES2134_114680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES2134_114680 PF02403 Seryl-tRNA synthetase N-terminal domain NIES2134_114690 PF01225 Mur ligase family, catalytic domain NIES2134_114690 PF02875 Mur ligase family, glutamate ligase domain NIES2134_114690 PF08245 Mur ligase middle domain NIES2134_114720 PF07726 ATPase family associated with various cellular activities (AAA) NIES2134_114720 PF17863 AAA lid domain NIES2134_114730 PF01687 Riboflavin kinase NIES2134_114730 PF06574 FAD synthetase NIES2134_114740 PF00970 Oxidoreductase FAD-binding domain NIES2134_114740 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES2134_114740 PF00175 Oxidoreductase NAD-binding domain NIES2134_114750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NIES2134_114750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NIES2134_114760 PF00156 Phosphoribosyl transferase domain NIES2134_114780 PF01593 Flavin containing amine oxidoreductase NIES2134_114810 PF04055 Radical SAM superfamily NIES2134_114810 PF18693 TRAM domain NIES2134_114810 PF00919 Uncharacterized protein family UPF0004 NIES2134_114830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NIES2134_114830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NIES2134_114830 PF06827 Zinc finger found in FPG and IleRS NIES2134_114840 PF02427 Photosystem I reaction centre subunit IV / PsaE NIES2134_114850 PF01740 STAS domain NIES2134_114860 PF00793 DAHP synthetase I family NIES2134_114880 PF00005 ABC transporter NIES2134_114880 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES2134_114940 PF02325 YGGT family NIES2134_114950 PF02086 D12 class N6 adenine-specific DNA methyltransferase NIES2134_114970 PF01435 Peptidase family M48 NIES2134_114980 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NIES2134_115000 PF00421 Photosystem II protein NIES2134_115010 PF00124 Photosynthetic reaction centre protein NIES2134_115020 PF02033 Ribosome-binding factor A NIES2134_115030 PF01925 Sulfite exporter TauE/SafE NIES2134_115040 PF11127 Protein of unknown function (DUF2892) NIES2134_115040 PF00581 Rhodanese-like domain NIES2134_115050 PF00753 Metallo-beta-lactamase superfamily NIES2134_115060 PF02913 FAD linked oxidases, C-terminal domain NIES2134_115060 PF01565 FAD binding domain NIES2134_115070 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES2134_115070 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES2134_115090 PF01266 FAD dependent oxidoreductase NIES2134_115090 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NIES2134_115110 PF00707 Translation initiation factor IF-3, C-terminal domain NIES2134_115110 PF05198 Translation initiation factor IF-3, N-terminal domain NIES2134_115120 PF00529 HlyD membrane-fusion protein of T1SS NIES2134_115120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES2134_115130 PF00873 AcrB/AcrD/AcrF family NIES2134_115140 PF03989 DNA gyrase C-terminal domain, beta-propeller NIES2134_115140 PF00521 DNA gyrase/topoisomerase IV, subunit A NIES2134_115150 PF09179 TilS substrate binding domain NIES2134_115150 PF01171 PP-loop family NIES2134_115160 PF01578 Cytochrome C assembly protein NIES2134_115180 PF00176 SNF2 family N-terminal domain NIES2134_115180 PF00271 Helicase conserved C-terminal domain NIES2134_115180 PF12419 SNF2 Helicase protein NIES2134_115190 PF08448 PAS fold NIES2134_115190 PF08447 PAS fold NIES2134_115190 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_115190 PF00563 EAL domain NIES2134_115200 PF01746 tRNA (Guanine-1)-methyltransferase NIES2134_115240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NIES2134_115240 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES2134_115250 PF00595 PDZ domain NIES2134_115250 PF03572 Peptidase family S41 NIES2134_115260 PF01509 TruB family pseudouridylate synthase (N terminal domain) NIES2134_115280 PF08241 Methyltransferase domain NIES2134_115290 PF02347 Glycine cleavage system P-protein NIES2134_115300 PF01654 Cytochrome bd terminal oxidase subunit I NIES2134_115310 PF02322 Cytochrome bd terminal oxidase subunit II NIES2134_115320 PF00180 Isocitrate/isopropylmalate dehydrogenase NIES2134_115350 PF04055 Radical SAM superfamily NIES2134_115360 PF00936 BMC domain NIES2134_115380 PF05419 GUN4-like NIES2134_115380 PF16416 ARM-like repeat domain, GUN4-N terminal NIES2134_115390 PF01467 Cytidylyltransferase-like NIES2134_115390 PF00294 pfkB family carbohydrate kinase NIES2134_115410 PF13439 Glycosyltransferase Family 4 NIES2134_115420 PF00534 Glycosyl transferases group 1 NIES2134_115420 PF13439 Glycosyltransferase Family 4 NIES2134_115440 PF00120 Glutamine synthetase, catalytic domain NIES2134_115440 PF03951 Glutamine synthetase, beta-Grasp domain NIES2134_115450 PF01926 50S ribosome-binding GTPase NIES2134_115450 PF06071 Protein of unknown function (DUF933) NIES2134_115460 PF01219 Prokaryotic diacylglycerol kinase NIES2134_115470 PF02130 Uncharacterized protein family UPF0054 NIES2134_115490 PF01098 Cell cycle protein NIES2134_115520 PF00459 Inositol monophosphatase family NIES2134_115530 PF13180 PDZ domain NIES2134_115550 PF16123 Hydroxyacylglutathione hydrolase C-terminus NIES2134_115550 PF00753 Metallo-beta-lactamase superfamily NIES2134_115560 PF00633 Helix-hairpin-helix motif NIES2134_115560 PF00730 HhH-GPD superfamily base excision DNA repair protein NIES2134_115570 PF02163 Peptidase family M50 NIES2134_115570 PF13180 PDZ domain NIES2134_115580 PF17848 Acetyl-coA carboxylase zinc finger domain NIES2134_115580 PF01039 Carboxyl transferase domain NIES2134_115610 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NIES2134_115610 PF03900 Porphobilinogen deaminase, C-terminal domain NIES2134_115640 PF00664 ABC transporter transmembrane region NIES2134_115640 PF00005 ABC transporter NIES2134_115650 PF00027 Cyclic nucleotide-binding domain NIES2134_115650 PF13545 Crp-like helix-turn-helix domain NIES2134_115710 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES2134_115720 PF00459 Inositol monophosphatase family NIES2134_115740 PF00672 HAMP domain NIES2134_115740 PF13426 PAS domain NIES2134_115740 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_115740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_115760 PF03109 ABC1 family NIES2134_115790 PF02754 Cysteine-rich domain NIES2134_115790 PF13183 4Fe-4S dicluster domain NIES2134_115800 PF01565 FAD binding domain NIES2134_115810 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_115810 PF00072 Response regulator receiver domain NIES2134_115830 PF00795 Carbon-nitrogen hydrolase NIES2134_115870 PF13545 Crp-like helix-turn-helix domain NIES2134_115880 PF04715 Anthranilate synthase component I, N terminal region NIES2134_115880 PF00425 chorismate binding enzyme NIES2134_115920 PF01327 Polypeptide deformylase NIES2134_115940 PF01597 Glycine cleavage H-protein NIES2134_115950 PF02653 Branched-chain amino acid transport system / permease component NIES2134_115960 PF02541 Ppx/GppA phosphatase family NIES2134_115980 PF00583 Acetyltransferase (GNAT) family NIES2134_115990 PF02769 AIR synthase related protein, C-terminal domain NIES2134_115990 PF00586 AIR synthase related protein, N-terminal domain NIES2134_115990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NIES2134_116000 PF13537 Glutamine amidotransferase domain NIES2134_116000 PF00156 Phosphoribosyl transferase domain NIES2134_116010 PF00326 Prolyl oligopeptidase family NIES2134_116020 PF00677 Lumazine binding domain NIES2134_116030 PF00889 Elongation factor TS NIES2134_116040 PF00318 Ribosomal protein S2 NIES2134_116050 PF13614 AAA domain NIES2134_116060 PF00005 ABC transporter NIES2134_116060 PF03459 TOBE domain NIES2134_116100 PF04012 PspA/IM30 family NIES2134_116120 PF00355 Rieske [2Fe-2S] domain NIES2134_116130 PF14870 Photosynthesis system II assembly factor YCF48 NIES2134_116140 PF00301 Rubredoxin NIES2134_116150 PF17746 SfsA N-terminal OB domain NIES2134_116150 PF03749 Sugar fermentation stimulation protein RE domain NIES2134_116160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NIES2134_116170 PF09367 CpeS-like protein NIES2134_116180 PF10792 Protein of unknown function (DUF2605) NIES2134_116220 PF02527 rRNA small subunit methyltransferase G NIES2134_116240 PF00395 S-layer homology domain NIES2134_116240 PF04966 Carbohydrate-selective porin, OprB family NIES2134_116250 PF00633 Helix-hairpin-helix motif NIES2134_116250 PF04002 RadC-like JAB domain NIES2134_116260 PF03976 Polyphosphate kinase 2 (PPK2) NIES2134_116280 PF00171 Aldehyde dehydrogenase family NIES2134_116290 PF09366 Protein of unknown function (DUF1997) NIES2134_116300 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_116310 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NIES2134_116310 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NIES2134_116320 PF02885 Glycosyl transferase family, helical bundle domain NIES2134_116320 PF00591 Glycosyl transferase family, a/b domain NIES2134_116340 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIES2134_116340 PF07685 CobB/CobQ-like glutamine amidotransferase domain NIES2134_116380 PF06969 HemN C-terminal domain NIES2134_116390 PF01126 Heme oxygenase NIES2134_116400 PF02915 Rubrerythrin NIES2134_116410 PF11378 Protein of unknown function (DUF3181) NIES2134_116420 PF02531 PsaD NIES2134_116440 PF08241 Methyltransferase domain NIES2134_116450 PF00925 GTP cyclohydrolase II NIES2134_116450 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NIES2134_116490 PF06508 Queuosine biosynthesis protein QueC NIES2134_116500 PF00012 Hsp70 protein NIES2134_116530 PF00924 Mechanosensitive ion channel NIES2134_116530 PF12795 Mechanosensitive ion channel porin domain NIES2134_116530 PF12794 Mechanosensitive ion channel inner membrane domain 1 NIES2134_116540 PF02021 Uncharacterised protein family UPF0102 NIES2134_116550 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NIES2134_116550 PF01488 Shikimate / quinate 5-dehydrogenase NIES2134_116550 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NIES2134_116570 PF07664 Ferrous iron transport protein B C terminus NIES2134_116570 PF07670 Nucleoside recognition NIES2134_116570 PF02421 Ferrous iron transport protein B NIES2134_116580 PF02421 Ferrous iron transport protein B NIES2134_116580 PF07664 Ferrous iron transport protein B C terminus NIES2134_116580 PF07670 Nucleoside recognition NIES2134_116600 PF00210 Ferritin-like domain NIES2134_116620 PF00155 Aminotransferase class I and II NIES2134_116630 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NIES2134_116650 PF00883 Cytosol aminopeptidase family, catalytic domain NIES2134_116650 PF02789 Cytosol aminopeptidase family, N-terminal domain NIES2134_116660 PF04452 RNA methyltransferase NIES2134_116670 PF00164 Ribosomal protein S12/S23 NIES2134_116680 PF00177 Ribosomal protein S7p/S5e NIES2134_116690 PF14492 Elongation Factor G, domain II NIES2134_116690 PF00679 Elongation factor G C-terminus NIES2134_116690 PF00009 Elongation factor Tu GTP binding domain NIES2134_116690 PF03764 Elongation factor G, domain IV NIES2134_116690 PF03144 Elongation factor Tu domain 2 NIES2134_116700 PF00009 Elongation factor Tu GTP binding domain NIES2134_116700 PF03144 Elongation factor Tu domain 2 NIES2134_116700 PF03143 Elongation factor Tu C-terminal domain NIES2134_116710 PF00338 Ribosomal protein S10p/S20e NIES2134_116730 PF01541 GIY-YIG catalytic domain NIES2134_116730 PF12826 Helix-hairpin-helix motif NIES2134_116730 PF08459 UvrC Helix-hairpin-helix N-terminal NIES2134_116730 PF02151 UvrB/uvrC motif NIES2134_116750 PF13085 2Fe-2S iron-sulfur cluster binding domain NIES2134_116760 PF00762 Ferrochelatase NIES2134_116770 PF00005 ABC transporter NIES2134_116770 PF17912 MalK OB fold domain NIES2134_116770 PF03459 TOBE domain NIES2134_116780 PF00348 Polyprenyl synthetase NIES2134_116790 PF03816 Cell envelope-related transcriptional attenuator domain NIES2134_116800 PF00574 Clp protease NIES2134_116820 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIES2134_116820 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NIES2134_116830 PF02457 DisA bacterial checkpoint controller nucleotide-binding NIES2134_116840 PF01255 Putative undecaprenyl diphosphate synthase NIES2134_116860 PF00288 GHMP kinases N terminal domain NIES2134_116860 PF08544 GHMP kinases C terminal NIES2134_116870 PF18579 Rubisco accumulation factor 1 helix turn helix domain NIES2134_116870 PF18578 Rubisco accumulation factor 1 alpha helical domain NIES2134_116870 PF18087 Rubisco Assembly chaperone C-terminal domain NIES2134_116880 PF13614 AAA domain NIES2134_116900 PF00005 ABC transporter NIES2134_116920 PF02219 Methylenetetrahydrofolate reductase NIES2134_116930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIES2134_116930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIES2134_116930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIES2134_116930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIES2134_116940 PF01467 Cytidylyltransferase-like NIES2134_116940 PF00294 pfkB family carbohydrate kinase NIES2134_116950 PF01520 N-acetylmuramoyl-L-alanine amidase NIES2134_116950 PF08239 Bacterial SH3 domain NIES2134_116990 PF03600 Citrate transporter NIES2134_117050 PF01699 Sodium/calcium exchanger protein NIES2134_117070 PF11283 Protein of unknown function (DUF3084) NIES2134_117090 PF01975 Survival protein SurE NIES2134_117130 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NIES2134_117140 PF07977 FabA-like domain NIES2134_117150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NIES2134_117150 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_117160 PF00588 SpoU rRNA Methylase family NIES2134_117180 PF03552 Cellulose synthase NIES2134_117180 PF00535 Glycosyl transferase family 2 NIES2134_117180 PF07238 PilZ domain NIES2134_117190 PF03552 Cellulose synthase NIES2134_117190 PF00535 Glycosyl transferase family 2 NIES2134_117190 PF07238 PilZ domain NIES2134_117210 PF01725 Ham1 family NIES2134_117230 PF05685 Putative restriction endonuclease NIES2134_117250 PF09587 Bacterial capsule synthesis protein PGA_cap NIES2134_117260 PF00571 CBS domain NIES2134_117260 PF01380 SIS domain NIES2134_117280 PF01343 Peptidase family S49 NIES2134_117310 PF17810 Arginine decarboxylase helical bundle domain NIES2134_117310 PF17944 Arginine decarboxylase C-terminal helical extension NIES2134_117310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NIES2134_117320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIES2134_117320 PF00289 Biotin carboxylase, N-terminal domain NIES2134_117320 PF02785 Biotin carboxylase C-terminal domain NIES2134_117330 PF04101 Glycosyltransferase family 28 C-terminal domain NIES2134_117330 PF03033 Glycosyltransferase family 28 N-terminal domain NIES2134_117340 PF01451 Low molecular weight phosphotyrosine protein phosphatase NIES2134_117350 PF00586 AIR synthase related protein, N-terminal domain NIES2134_117350 PF02769 AIR synthase related protein, C-terminal domain NIES2134_117420 PF00361 Proton-conducting membrane transporter NIES2134_117440 PF00361 Proton-conducting membrane transporter NIES2134_117460 PF03881 Fructosamine kinase NIES2134_117470 PF10502 Signal peptidase, peptidase S26 NIES2134_117480 PF01571 Aminomethyltransferase folate-binding domain NIES2134_117480 PF08669 Glycine cleavage T-protein C-terminal barrel domain NIES2134_117480 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES2134_117480 PF17806 Sarcosine oxidase A3 domain NIES2134_117490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES2134_117490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES2134_117490 PF00205 Thiamine pyrophosphate enzyme, central domain NIES2134_117500 PF01329 Pterin 4 alpha carbinolamine dehydratase NIES2134_117510 PF00253 Ribosomal protein S14p/S29e NIES2134_117520 PF01406 tRNA synthetases class I (C) catalytic domain NIES2134_117520 PF09190 DALR domain NIES2134_117540 PF00206 Lyase NIES2134_117540 PF10397 Adenylosuccinate lyase C-terminus NIES2134_117560 PF00563 EAL domain NIES2134_117560 PF00498 FHA domain NIES2134_117560 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_117570 PF01434 Peptidase family M41 NIES2134_117570 PF06480 FtsH Extracellular NIES2134_117570 PF17862 AAA+ lid domain NIES2134_117570 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_117580 PF00696 Amino acid kinase family NIES2134_117580 PF01842 ACT domain NIES2134_117580 PF13840 ACT domain NIES2134_117590 PF00892 EamA-like transporter family NIES2134_117610 PF05175 Methyltransferase small domain NIES2134_117650 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NIES2134_117650 PF02843 Phosphoribosylglycinamide synthetase, C domain NIES2134_117650 PF02844 Phosphoribosylglycinamide synthetase, N domain NIES2134_117670 PF00005 ABC transporter NIES2134_117680 PF02374 Anion-transporting ATPase NIES2134_117680 PF17886 HSP20-like domain found in ArsA NIES2134_117690 PF00124 Photosynthetic reaction centre protein NIES2134_117700 PF00124 Photosynthetic reaction centre protein NIES2134_117710 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus NIES2134_117710 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term NIES2134_117730 PF07685 CobB/CobQ-like glutamine amidotransferase domain NIES2134_117730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIES2134_117740 PF04225 Opacity-associated protein A LysM-like domain NIES2134_117740 PF01551 Peptidase family M23 NIES2134_117760 PF07517 SecA DEAD-like domain NIES2134_117760 PF07516 SecA Wing and Scaffold domain NIES2134_117760 PF01043 SecA preprotein cross-linking domain NIES2134_117800 PF12849 PBP superfamily domain NIES2134_117830 PF00563 EAL domain NIES2134_117830 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_117830 PF03707 Bacterial signalling protein N terminal repeat NIES2134_117860 PF03477 ATP cone domain NIES2134_117900 PF00196 Bacterial regulatory proteins, luxR family NIES2134_117900 PF00072 Response regulator receiver domain NIES2134_117910 PF01276 Orn/Lys/Arg decarboxylase, major domain NIES2134_117910 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NIES2134_117920 PF06949 Protein of unknown function (DUF1292) NIES2134_117950 PF02779 Transketolase, pyrimidine binding domain NIES2134_117950 PF02780 Transketolase, C-terminal domain NIES2134_117950 PF00456 Transketolase, thiamine diphosphate binding domain NIES2134_117960 PF00109 Beta-ketoacyl synthase, N-terminal domain NIES2134_117960 PF02801 Beta-ketoacyl synthase, C-terminal domain NIES2134_117970 PF00550 Phosphopantetheine attachment site NIES2134_117980 PF00773 RNB domain NIES2134_117980 PF00575 S1 RNA binding domain NIES2134_117980 PF17876 Cold shock domain NIES2134_117980 PF08206 Ribonuclease B OB domain NIES2134_117990 PF02911 Formyl transferase, C-terminal domain NIES2134_117990 PF00551 Formyl transferase NIES2134_118010 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_118010 PF17862 AAA+ lid domain NIES2134_118010 PF01434 Peptidase family M41 NIES2134_118030 PF01555 DNA methylase NIES2134_118060 PF01131 DNA topoisomerase NIES2134_118060 PF01751 Toprim domain NIES2134_118060 PF13368 Topoisomerase C-terminal repeat NIES2134_118070 PF00005 ABC transporter NIES2134_118080 PF00005 ABC transporter NIES2134_118090 PF00719 Inorganic pyrophosphatase NIES2134_118150 PF13411 MerR HTH family regulatory protein NIES2134_118170 PF08331 Domain of unknown function (DUF1730) NIES2134_118190 PF00106 short chain dehydrogenase NIES2134_118200 PF12697 Alpha/beta hydrolase family NIES2134_118210 PF01040 UbiA prenyltransferase family NIES2134_118220 PF02628 Cytochrome oxidase assembly protein NIES2134_118260 PF03129 Anticodon binding domain NIES2134_118260 PF13393 Histidyl-tRNA synthetase NIES2134_118280 PF02463 RecF/RecN/SMC N terminal domain NIES2134_118300 PF00005 ABC transporter NIES2134_118310 PF00331 Glycosyl hydrolase family 10 NIES2134_118310 PF12791 Anti-sigma factor N-terminus NIES2134_118330 PF00005 ABC transporter NIES2134_118340 PF01458 Uncharacterized protein family (UPF0051) NIES2134_118360 PF13640 2OG-Fe(II) oxygenase superfamily NIES2134_118360 PF18331 PKHD-type hydroxylase C-terminal domain NIES2134_118380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_118380 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_118380 PF16736 Single Cache-like NIES2134_118380 PF00989 PAS fold NIES2134_118390 PF01627 Hpt domain NIES2134_118390 PF00072 Response regulator receiver domain NIES2134_118390 PF00486 Transcriptional regulatory protein, C terminal NIES2134_118400 PF01960 ArgJ family NIES2134_118420 PF00311 Phosphoenolpyruvate carboxylase NIES2134_118440 PF00485 Phosphoribulokinase / Uridine kinase family NIES2134_118450 PF01783 Ribosomal L32p protein family NIES2134_118500 PF00403 Heavy-metal-associated domain NIES2134_118540 PF01925 Sulfite exporter TauE/SafE NIES2134_118550 PF07992 Pyridine nucleotide-disulphide oxidoreductase NIES2134_118560 PF06470 SMC proteins Flexible Hinge Domain NIES2134_118560 PF02463 RecF/RecN/SMC N terminal domain NIES2134_118580 PF01668 SmpB protein NIES2134_118590 PF01081 KDPG and KHG aldolase NIES2134_118610 PF03170 Bacterial cellulose synthase subunit NIES2134_118610 PF03552 Cellulose synthase NIES2134_118610 PF00535 Glycosyl transferase family 2 NIES2134_118610 PF07238 PilZ domain NIES2134_118630 PF00202 Aminotransferase class-III NIES2134_118650 PF13184 NusA-like KH domain NIES2134_118650 PF08529 NusA N-terminal domain NIES2134_118650 PF00575 S1 RNA binding domain NIES2134_118660 PF02576 RimP N-terminal domain NIES2134_118690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NIES2134_118690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NIES2134_118720 PF01555 DNA methylase NIES2134_118740 PF17792 ThiD2 family NIES2134_118740 PF02581 Thiamine monophosphate synthase NIES2134_118750 PF13847 Methyltransferase domain NIES2134_118760 PF01571 Aminomethyltransferase folate-binding domain NIES2134_118780 PF01933 Uncharacterised protein family UPF0052 NIES2134_118800 PF01209 ubiE/COQ5 methyltransferase family NIES2134_118830 PF03167 Uracil DNA glycosylase superfamily NIES2134_118840 PF00502 Phycobilisome protein NIES2134_118850 PF00502 Phycobilisome protein NIES2134_118860 PF01383 CpcD/allophycocyanin linker domain NIES2134_118860 PF00427 Phycobilisome Linker polypeptide NIES2134_118870 PF01383 CpcD/allophycocyanin linker domain NIES2134_118880 PF03130 PBS lyase HEAT-like repeat NIES2134_118890 PF03130 PBS lyase HEAT-like repeat NIES2134_118900 PF00427 Phycobilisome Linker polypeptide NIES2134_118910 PF00427 Phycobilisome Linker polypeptide NIES2134_118920 PF00427 Phycobilisome Linker polypeptide NIES2134_118940 PF01737 YCF9 NIES2134_118950 PF00588 SpoU rRNA Methylase family NIES2134_118950 PF08032 RNA 2'-O ribose methyltransferase substrate binding NIES2134_118960 PF00117 Glutamine amidotransferase class-I NIES2134_118960 PF00958 GMP synthase C terminal domain NIES2134_118960 PF02540 NAD synthase NIES2134_118970 PF08264 Anticodon-binding domain of tRNA NIES2134_118970 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase NIES2134_118970 PF00133 tRNA synthetases class I (I, L, M and V) NIES2134_118970 PF10458 Valyl tRNA synthetase tRNA binding arm NIES2134_118980 PF14403 Circularly permuted ATP-grasp type 2 NIES2134_119000 PF00448 SRP54-type protein, GTPase domain NIES2134_119000 PF02881 SRP54-type protein, helical bundle domain NIES2134_119000 PF02978 Signal peptide binding domain NIES2134_119010 PF09210 Domain of unknown function (DUF1957) NIES2134_119010 PF03065 Glycosyl hydrolase family 57 NIES2134_119030 PF01385 Probable transposase NIES2134_119030 PF12323 Helix-turn-helix domain NIES2134_119030 PF07282 Putative transposase DNA-binding domain NIES2134_119040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NIES2134_119040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NIES2134_119040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NIES2134_119040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NIES2134_119050 PF12320 Type 5 capsule protein repressor C-terminal domain NIES2134_119050 PF00149 Calcineurin-like phosphoesterase NIES2134_119090 PF12706 Beta-lactamase superfamily domain NIES2134_119110 PF02390 Putative methyltransferase NIES2134_119120 PF00909 Ammonium Transporter Family NIES2134_119140 PF01113 Dihydrodipicolinate reductase, N-terminus NIES2134_119140 PF05173 Dihydrodipicolinate reductase, C-terminus NIES2134_119160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_119180 PF00005 ABC transporter NIES2134_119210 PF02594 Uncharacterised ACR, YggU family COG1872 NIES2134_119220 PF11838 ERAP1-like C-terminal domain NIES2134_119220 PF01433 Peptidase family M1 domain NIES2134_119230 PF00579 tRNA synthetases class I (W and Y) NIES2134_119260 PF00990 Diguanylate cyclase, GGDEF domain NIES2134_119260 PF03707 Bacterial signalling protein N terminal repeat NIES2134_119260 PF00563 EAL domain NIES2134_119280 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_119290 PF00005 ABC transporter NIES2134_119300 PF00005 ABC transporter NIES2134_119320 PF00005 ABC transporter NIES2134_119360 PF00510 Cytochrome c oxidase subunit III NIES2134_119370 PF00115 Cytochrome C and Quinol oxidase polypeptide I NIES2134_119380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NIES2134_119380 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NIES2134_119400 PF06596 Photosystem II reaction centre X protein (PsbX) NIES2134_119410 PF07444 Ycf66 protein N-terminus NIES2134_119430 PF03775 Septum formation inhibitor MinC, C-terminal domain NIES2134_119440 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NIES2134_119450 PF03776 Septum formation topological specificity factor MinE NIES2134_119470 PF06838 Methionine gamma-lyase NIES2134_119480 PF13579 Glycosyl transferase 4-like domain NIES2134_119480 PF00534 Glycosyl transferases group 1 NIES2134_119530 PF07085 DRTGG domain NIES2134_119560 PF01544 CorA-like Mg2+ transporter protein NIES2134_119580 PF01040 UbiA prenyltransferase family NIES2134_119590 PF04029 2-phosphosulpholactate phosphatase NIES2134_119610 PF10502 Signal peptidase, peptidase S26 NIES2134_119630 PF00202 Aminotransferase class-III NIES2134_119670 PF02080 TrkA-C domain NIES2134_119670 PF02254 TrkA-N domain NIES2134_119700 PF00270 DEAD/DEAH box helicase NIES2134_119700 PF00271 Helicase conserved C-terminal domain NIES2134_119700 PF17764 3′ DNA-binding domain (3′BD) NIES2134_119700 PF18074 Primosomal protein N C-terminal domain NIES2134_119700 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NIES2134_119710 PF00171 Aldehyde dehydrogenase family NIES2134_119730 PF13439 Glycosyltransferase Family 4 NIES2134_119730 PF00534 Glycosyl transferases group 1 NIES2134_119760 PF03358 NADPH-dependent FMN reductase NIES2134_119770 PF00490 Delta-aminolevulinic acid dehydratase NIES2134_119790 PF00557 Metallopeptidase family M24 NIES2134_119800 PF00875 DNA photolyase NIES2134_119800 PF03441 FAD binding domain of DNA photolyase NIES2134_119820 PF01740 STAS domain NIES2134_119830 PF00636 Ribonuclease III domain NIES2134_119840 PF12966 N-ATPase, AtpR subunit NIES2134_119850 PF00119 ATP synthase A chain NIES2134_119860 PF00137 ATP synthase subunit C NIES2134_119870 PF00430 ATP synthase B/B' CF(0) NIES2134_119880 PF00430 ATP synthase B/B' CF(0) NIES2134_119890 PF00213 ATP synthase delta (OSCP) subunit NIES2134_119900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NIES2134_119900 PF02874 ATP synthase alpha/beta family, beta-barrel domain NIES2134_119900 PF00306 ATP synthase alpha/beta chain, C terminal domain NIES2134_119910 PF00483 Nucleotidyl transferase NIES2134_119920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_119920 PF00672 HAMP domain NIES2134_119920 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_119920 PF00989 PAS fold NIES2134_119940 PF00290 Tryptophan synthase alpha chain NIES2134_119950 PF01098 Cell cycle protein NIES2134_119960 PF00005 ABC transporter NIES2134_119960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NIES2134_119970 PF01716 Manganese-stabilising protein / photosystem II polypeptide NIES2134_119980 PF00069 Protein kinase domain NIES2134_119990 PF00762 Ferrochelatase NIES2134_120000 PF10664 Cyanobacterial and plastid NDH-1 subunit M NIES2134_120020 PF00999 Sodium/hydrogen exchanger family NIES2134_120030 PF01134 Glucose inhibited division protein A NIES2134_120040 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NIES2134_120050 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus NIES2134_120060 PF02687 FtsX-like permease family NIES2134_120060 PF18075 FtsX extracellular domain NIES2134_120070 PF00005 ABC transporter NIES2134_120080 PF03808 Glycosyl transferase WecB/TagA/CpsF family NIES2134_120090 PF00124 Photosynthetic reaction centre protein NIES2134_120100 PF07282 Putative transposase DNA-binding domain NIES2134_120100 PF01385 Probable transposase NIES2134_120100 PF12323 Helix-turn-helix domain NIES2134_120110 PF01797 Transposase IS200 like NIES2134_120120 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NIES2134_120130 PF00483 Nucleotidyl transferase NIES2134_120140 PF16363 GDP-mannose 4,6 dehydratase NIES2134_120150 PF14437 MafB19-like deaminase NIES2134_120160 PF01168 Alanine racemase, N-terminal domain NIES2134_120160 PF00842 Alanine racemase, C-terminal domain NIES2134_120170 PF01177 Asp/Glu/Hydantoin racemase NIES2134_120180 PF01027 Inhibitor of apoptosis-promoting Bax1 NIES2134_120190 PF01264 Chorismate synthase NIES2134_120200 PF01521 Iron-sulphur cluster biosynthesis NIES2134_120210 PF08338 Domain of unknown function (DUF1731) NIES2134_120210 PF01370 NAD dependent epimerase/dehydratase family NIES2134_120230 PF13202 EF hand NIES2134_120230 PF00923 Transaldolase/Fructose-6-phosphate aldolase NIES2134_120240 PF12323 Helix-turn-helix domain NIES2134_120240 PF01385 Probable transposase NIES2134_120240 PF07282 Putative transposase DNA-binding domain NIES2134_120250 PF01797 Transposase IS200 like NIES2134_120280 PF00578 AhpC/TSA family NIES2134_120300 PF00800 Prephenate dehydratase NIES2134_120310 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NIES2134_120310 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NIES2134_120330 PF04542 Sigma-70 region 2 NIES2134_120330 PF08281 Sigma-70, region 4 NIES2134_120350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NIES2134_120350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NIES2134_120380 PF00005 ABC transporter NIES2134_120380 PF12399 Branched-chain amino acid ATP-binding cassette transporter NIES2134_120400 PF00588 SpoU rRNA Methylase family NIES2134_120420 PF00392 Bacterial regulatory proteins, gntR family NIES2134_120430 PF01472 PUA domain NIES2134_120430 PF00696 Amino acid kinase family NIES2134_120440 PF00459 Inositol monophosphatase family NIES2134_120480 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NIES2134_120480 PF00361 Proton-conducting membrane transporter NIES2134_120480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NIES2134_120490 PF00361 Proton-conducting membrane transporter NIES2134_120510 PF00464 Serine hydroxymethyltransferase NIES2134_120520 PF00953 Glycosyl transferase family 4 NIES2134_120530 PF02464 Competence-damaged protein NIES2134_120530 PF18146 Damage-inducible protein CinA KH domain NIES2134_120530 PF00994 Probable molybdopterin binding domain NIES2134_120680 PF01740 STAS domain NIES2134_120680 PF00916 Sulfate permease family NIES2134_120700 PF02245 Methylpurine-DNA glycosylase (MPG) NIES2134_120720 PF01556 DnaJ C terminal domain NIES2134_120720 PF00226 DnaJ domain NIES2134_120730 PF00012 Hsp70 protein NIES2134_120750 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NIES2134_120750 PF01872 RibD C-terminal domain NIES2134_120770 PF01476 LysM domain NIES2134_120770 PF08525 Opacity-associated protein A N-terminal motif NIES2134_120770 PF01551 Peptidase family M23 NIES2134_120780 PF02602 Uroporphyrinogen-III synthase HemD NIES2134_120790 PF06206 CpeT/CpcT family (DUF1001) NIES2134_120800 PF01790 Prolipoprotein diacylglyceryl transferase NIES2134_120810 PF00453 Ribosomal protein L20 NIES2134_120820 PF01632 Ribosomal protein L35 NIES2134_120840 PF01479 S4 domain NIES2134_120840 PF17774 Putative RNA-binding domain in YlmH NIES2134_120870 PF12849 PBP superfamily domain NIES2134_120880 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_120890 PF00528 Binding-protein-dependent transport system inner membrane component NIES2134_120900 PF00005 ABC transporter NIES2134_120910 PF03575 Peptidase family S51 NIES2134_120920 PF02875 Mur ligase family, glutamate ligase domain NIES2134_120920 PF08245 Mur ligase middle domain NIES2134_120920 PF08443 RimK-like ATP-grasp domain NIES2134_120930 PF05378 Hydantoinase/oxoprolinase N-terminal region NIES2134_120930 PF01968 Hydantoinase/oxoprolinase NIES2134_120960 PF07282 Putative transposase DNA-binding domain NIES2134_120960 PF12323 Helix-turn-helix domain NIES2134_120960 PF01385 Probable transposase NIES2134_120970 PF01797 Transposase IS200 like NIES2134_120980 PF13476 AAA domain NIES2134_120990 PF00092 von Willebrand factor type A domain NIES2134_121010 PF00106 short chain dehydrogenase NIES2134_121020 PF04030 D-arabinono-1,4-lactone oxidase NIES2134_121020 PF01565 FAD binding domain NIES2134_121040 PF01040 UbiA prenyltransferase family NIES2134_121050 PF01145 SPFH domain / Band 7 family NIES2134_121060 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase NIES2134_121090 PF01914 MarC family integral membrane protein NIES2134_121100 PF00877 NlpC/P60 family NIES2134_121110 PF00478 IMP dehydrogenase / GMP reductase domain NIES2134_121130 PF02092 Glycyl-tRNA synthetase beta subunit NIES2134_121140 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NIES2134_121140 PF01138 3' exoribonuclease family, domain 1 NIES2134_121140 PF03725 3' exoribonuclease family, domain 2 NIES2134_121140 PF00575 S1 RNA binding domain NIES2134_121140 PF00013 KH domain NIES2134_121190 PF01040 UbiA prenyltransferase family NIES2134_121200 PF17275 Family of unknown function (DUF5340) NIES2134_121210 PF00583 Acetyltransferase (GNAT) family NIES2134_121220 PF00881 Nitroreductase family NIES2134_121230 PF03129 Anticodon binding domain NIES2134_121230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NIES2134_121230 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NIES2134_121240 PF00486 Transcriptional regulatory protein, C terminal NIES2134_121240 PF00072 Response regulator receiver domain NIES2134_121250 PF02132 RecR protein NIES2134_121250 PF13662 Toprim domain NIES2134_121250 PF00633 Helix-hairpin-helix motif NIES2134_121260 PF16658 Class II release factor RF3, C-terminal domain NIES2134_121260 PF00009 Elongation factor Tu GTP binding domain NIES2134_121270 PF16363 GDP-mannose 4,6 dehydratase NIES2134_121290 PF00762 Ferrochelatase NIES2134_121300 PF01062 Bestrophin, RFP-TM, chloride channel NIES2134_121320 PF12323 Helix-turn-helix domain NIES2134_121320 PF07282 Putative transposase DNA-binding domain NIES2134_121320 PF01385 Probable transposase NIES2134_121330 PF01797 Transposase IS200 like NIES2134_121370 PF00012 Hsp70 protein NIES2134_121380 PF00762 Ferrochelatase NIES2134_121410 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIES2134_121410 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIES2134_121440 PF03793 PASTA domain NIES2134_121440 PF00069 Protein kinase domain NIES2134_121460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NIES2134_121460 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_121470 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NIES2134_121480 PF11867 Domain of unknown function (DUF3387) NIES2134_121480 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NIES2134_121480 PF18766 SWI2/SNF2 ATPase NIES2134_121510 PF01420 Type I restriction modification DNA specificity domain NIES2134_121540 PF02384 N-6 DNA Methylase NIES2134_121570 PF02565 Recombination protein O C terminal NIES2134_121570 PF11967 Recombination protein O N terminal NIES2134_121590 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain NIES2134_121590 PF07228 Stage II sporulation protein E (SpoIIE) NIES2134_121600 PF01797 Transposase IS200 like NIES2134_121610 PF12323 Helix-turn-helix domain NIES2134_121610 PF01385 Probable transposase NIES2134_121610 PF07282 Putative transposase DNA-binding domain NIES2134_121630 PF01624 MutS domain I NIES2134_121630 PF05188 MutS domain II NIES2134_121630 PF05192 MutS domain III NIES2134_121630 PF05190 MutS family domain IV NIES2134_121630 PF00488 MutS domain V NIES2134_121650 PF03109 ABC1 family NIES2134_121680 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NIES2134_121780 PF00815 Histidinol dehydrogenase NIES2134_121790 PF05491 RuvB C-terminal winged helix domain NIES2134_121790 PF05496 Holliday junction DNA helicase RuvB P-loop domain NIES2134_121790 PF17864 RuvB AAA lid domain NIES2134_121800 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NIES2134_121800 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NIES2134_121810 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NIES2134_121830 PF01192 RNA polymerase Rpb6 NIES2134_121850 PF04055 Radical SAM superfamily NIES2134_121850 PF00919 Uncharacterized protein family UPF0004 NIES2134_121850 PF18693 TRAM domain NIES2134_121860 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NIES2134_121870 PF00578 AhpC/TSA family NIES2134_121870 PF10417 C-terminal domain of 1-Cys peroxiredoxin NIES2134_121890 PF01594 AI-2E family transporter NIES2134_121910 PF00557 Metallopeptidase family M24 NIES2134_121910 PF05195 Aminopeptidase P, N-terminal domain NIES2134_121920 PF00155 Aminotransferase class I and II NIES2134_121930 PF00216 Bacterial DNA-binding protein NIES2134_121940 PF00162 Phosphoglycerate kinase NIES2134_121950 PF00582 Universal stress protein family NIES2134_121980 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NIES2134_121990 PF01241 Photosystem I psaG / psaK NIES2134_122010 PF00391 PEP-utilising enzyme, mobile domain NIES2134_122010 PF00224 Pyruvate kinase, barrel domain NIES2134_122010 PF02887 Pyruvate kinase, alpha/beta domain NIES2134_122020 PF02492 CobW/HypB/UreG, nucleotide-binding domain NIES2134_122020 PF07683 Cobalamin synthesis protein cobW C-terminal domain NIES2134_122050 PF00211 Adenylate and Guanylate cyclase catalytic domain NIES2134_122080 PF14492 Elongation Factor G, domain II NIES2134_122080 PF00009 Elongation factor Tu GTP binding domain NIES2134_122080 PF03144 Elongation factor Tu domain 2 NIES2134_122080 PF00679 Elongation factor G C-terminus NIES2134_122100 PF03109 ABC1 family NIES2134_122110 PF00085 Thioredoxin NIES2134_122120 PF04286 Protein of unknown function (DUF445) NIES2134_122140 PF01494 FAD binding domain NIES2134_122160 PF05684 Protein of unknown function (DUF819) NIES2134_122190 PF01678 Diaminopimelate epimerase NIES2134_122210 PF01969 Protein of unknown function DUF111 NIES2134_122270 PF00111 2Fe-2S iron-sulfur cluster binding domain NIES2134_122290 PF00069 Protein kinase domain NIES2134_122290 PF03793 PASTA domain NIES2134_122300 PF04434 SWIM zinc finger NIES2134_122320 PF02578 Multi-copper polyphenol oxidoreductase laccase NIES2134_122330 PF05996 Ferredoxin-dependent bilin reductase NIES2134_122340 PF13243 Squalene-hopene cyclase C-terminal domain NIES2134_122340 PF13249 Squalene-hopene cyclase N-terminal domain NIES2134_122350 PF01435 Peptidase family M48 NIES2134_122360 PF00571 CBS domain NIES2134_122360 PF00291 Pyridoxal-phosphate dependent enzyme NIES2134_122400 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_122400 PF12464 Maltose acetyltransferase NIES2134_122410 PF01209 ubiE/COQ5 methyltransferase family NIES2134_122470 PF01531 Glycosyl transferase family 11 NIES2134_122480 PF00535 Glycosyl transferase family 2 NIES2134_122490 PF00535 Glycosyl transferase family 2 NIES2134_122520 PF00156 Phosphoribosyl transferase domain NIES2134_122530 PF01797 Transposase IS200 like NIES2134_122540 PF12323 Helix-turn-helix domain NIES2134_122540 PF01385 Probable transposase NIES2134_122540 PF07282 Putative transposase DNA-binding domain NIES2134_122550 PF12344 Ultra-violet resistance protein B NIES2134_122550 PF17757 UvrB interaction domain NIES2134_122550 PF02151 UvrB/uvrC motif NIES2134_122550 PF04851 Type III restriction enzyme, res subunit NIES2134_122550 PF00271 Helicase conserved C-terminal domain NIES2134_122560 PF00502 Phycobilisome protein NIES2134_122570 PF02542 YgbB family NIES2134_122590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NIES2134_122590 PF03466 LysR substrate binding domain NIES2134_122620 PF02350 UDP-N-acetylglucosamine 2-epimerase NIES2134_122630 PF02577 Bifunctional nuclease NIES2134_122650 PF01063 Amino-transferase class IV NIES2134_122670 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NIES2134_122680 PF00575 S1 RNA binding domain NIES2134_122690 PF01741 Large-conductance mechanosensitive channel, MscL NIES2134_122710 PF02705 K+ potassium transporter NIES2134_122720 PF00155 Aminotransferase class I and II NIES2134_122730 PF00465 Iron-containing alcohol dehydrogenase NIES2134_122740 PF05151 Photosystem II reaction centre M protein (PsbM) NIES2134_122750 PF05690 Thiazole biosynthesis protein ThiG NIES2134_122750 PF01266 FAD dependent oxidoreductase NIES2134_122770 PF02223 Thymidylate kinase NIES2134_122780 PF01336 OB-fold nucleic acid binding domain NIES2134_122780 PF02811 PHP domain NIES2134_122780 PF14579 Helix-hairpin-helix motif NIES2134_122780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIES2134_122780 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIES2134_122800 PF05670 NFACT protein RNA binding domain NIES2134_122820 PF00471 Ribosomal protein L33 NIES2134_122830 PF01084 Ribosomal protein S18 NIES2134_122840 PF01297 Zinc-uptake complex component A periplasmic NIES2134_122840 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment NIES2134_122850 PF00005 ABC transporter NIES2134_122880 PF00561 alpha/beta hydrolase fold NIES2134_122900 PF00266 Aminotransferase class-V NIES2134_122910 PF07733 Bacterial DNA polymerase III alpha NTPase domain NIES2134_122910 PF01336 OB-fold nucleic acid binding domain NIES2134_122910 PF02811 PHP domain NIES2134_122910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NIES2134_122910 PF14579 Helix-hairpin-helix motif NIES2134_122940 PF12323 Helix-turn-helix domain NIES2134_122940 PF07282 Putative transposase DNA-binding domain NIES2134_122940 PF01385 Probable transposase NIES2134_122960 PF01795 MraW methylase family NIES2134_122980 PF00905 Penicillin binding protein transpeptidase domain NIES2134_122980 PF03717 Penicillin-binding Protein dimerisation domain NIES2134_123020 PF06055 Exopolysaccharide synthesis, ExoD NIES2134_123040 PF00343 Carbohydrate phosphorylase NIES2134_123060 PF17863 AAA lid domain NIES2134_123060 PF07726 ATPase family associated with various cellular activities (AAA) NIES2134_123120 PF00085 Thioredoxin NIES2134_123140 PF00154 recA bacterial DNA recombination protein NIES2134_123150 PF00583 Acetyltransferase (GNAT) family NIES2134_123180 PF01979 Amidohydrolase family NIES2134_123190 PF00037 4Fe-4S binding domain NIES2134_123230 PF08264 Anticodon-binding domain of tRNA NIES2134_123230 PF13603 Leucyl-tRNA synthetase, Domain 2 NIES2134_123230 PF00133 tRNA synthetases class I (I, L, M and V) NIES2134_123240 PF00072 Response regulator receiver domain NIES2134_123240 PF00486 Transcriptional regulatory protein, C terminal NIES2134_123280 PF02152 Dihydroneopterin aldolase NIES2134_123290 PF03190 Protein of unknown function, DUF255 NIES2134_123300 PF08669 Glycine cleavage T-protein C-terminal barrel domain NIES2134_123300 PF01571 Aminomethyltransferase folate-binding domain NIES2134_123340 PF01208 Uroporphyrinogen decarboxylase (URO-D) NIES2134_123370 PF04545 Sigma-70, region 4 NIES2134_123370 PF04539 Sigma-70 region 3 NIES2134_123370 PF04542 Sigma-70 region 2 NIES2134_123380 PF02673 Bacitracin resistance protein BacA NIES2134_123400 PF00271 Helicase conserved C-terminal domain NIES2134_123400 PF17191 RecG wedge domain NIES2134_123400 PF00270 DEAD/DEAH box helicase NIES2134_123410 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_123410 PF06480 FtsH Extracellular NIES2134_123410 PF01434 Peptidase family M41 NIES2134_123410 PF17862 AAA+ lid domain NIES2134_123420 PF05552 Conserved TM helix NIES2134_123430 PF00223 Photosystem I psaA/psaB protein NIES2134_123440 PF00223 Photosystem I psaA/psaB protein NIES2134_123450 PF01042 Endoribonuclease L-PSP NIES2134_123500 PF00196 Bacterial regulatory proteins, luxR family NIES2134_123500 PF00072 Response regulator receiver domain NIES2134_123510 PF02575 YbaB/EbfC DNA-binding family NIES2134_123530 PF00361 Proton-conducting membrane transporter NIES2134_123530 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NIES2134_123530 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NIES2134_123540 PF00361 Proton-conducting membrane transporter NIES2134_123560 PF00342 Phosphoglucose isomerase NIES2134_123580 PF01743 Poly A polymerase head domain NIES2134_123580 PF12627 Probable RNA and SrmB- binding site of polymerase A NIES2134_123580 PF13735 tRNA nucleotidyltransferase domain 2 putative NIES2134_123610 PF00764 Arginosuccinate synthase NIES2134_123620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NIES2134_123620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NIES2134_123630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NIES2134_123650 PF02446 4-alpha-glucanotransferase NIES2134_123670 PF10716 NADH dehydrogenase transmembrane subunit NIES2134_123680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NIES2134_123690 PF01112 Asparaginase NIES2134_123720 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NIES2134_123730 PF00218 Indole-3-glycerol phosphate synthase NIES2134_123740 PF13419 Haloacid dehalogenase-like hydrolase NIES2134_123750 PF02233 NAD(P) transhydrogenase beta subunit NIES2134_123760 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NIES2134_123770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NIES2134_123770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NIES2134_123780 PF00582 Universal stress protein family NIES2134_123800 PF00005 ABC transporter NIES2134_123800 PF00664 ABC transporter transmembrane region NIES2134_123810 PF01676 Metalloenzyme superfamily NIES2134_123810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NIES2134_123820 PF01494 FAD binding domain NIES2134_123840 PF00472 RF-1 domain NIES2134_123840 PF03462 PCRF domain NIES2134_123850 PF00163 Ribosomal protein S4/S9 N-terminal domain NIES2134_123850 PF01479 S4 domain NIES2134_123870 PF00654 Voltage gated chloride channel NIES2134_123880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NIES2134_123890 PF01300 Telomere recombination NIES2134_123900 PF07884 Vitamin K epoxide reductase family NIES2134_123920 PF03209 PUCC protein NIES2134_123930 PF07690 Major Facilitator Superfamily NIES2134_123950 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NIES2134_123980 PF12323 Helix-turn-helix domain NIES2134_123980 PF01385 Probable transposase NIES2134_123980 PF07282 Putative transposase DNA-binding domain NIES2134_123990 PF00475 Imidazoleglycerol-phosphate dehydratase NIES2134_124000 PF01556 DnaJ C terminal domain NIES2134_124000 PF00684 DnaJ central domain NIES2134_124000 PF00226 DnaJ domain NIES2134_124010 PF01434 Peptidase family M41 NIES2134_124010 PF06480 FtsH Extracellular NIES2134_124010 PF17862 AAA+ lid domain NIES2134_124010 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_124030 PF16582 Middle domain of thiamine pyrophosphate NIES2134_124030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NIES2134_124030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NIES2134_124050 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system NIES2134_124120 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NIES2134_124120 PF00437 Type II/IV secretion system protein NIES2134_124130 PF00437 Type II/IV secretion system protein NIES2134_124140 PF00482 Type II secretion system (T2SS), protein F NIES2134_124150 PF00226 DnaJ domain NIES2134_124150 PF01556 DnaJ C terminal domain NIES2134_124180 PF00266 Aminotransferase class-V NIES2134_124190 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NIES2134_124190 PF01348 Type II intron maturase NIES2134_124200 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain NIES2134_124220 PF04371 Porphyromonas-type peptidyl-arginine deiminase NIES2134_124230 PF01197 Ribosomal protein L31 NIES2134_124240 PF00380 Ribosomal protein S9/S16 NIES2134_124250 PF00572 Ribosomal protein L13 NIES2134_124260 PF01416 tRNA pseudouridine synthase NIES2134_124270 PF01196 Ribosomal protein L17 NIES2134_124280 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NIES2134_124280 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NIES2134_124280 PF01000 RNA polymerase Rpb3/RpoA insert domain NIES2134_124290 PF00411 Ribosomal protein S11 NIES2134_124300 PF00416 Ribosomal protein S13/S18 NIES2134_124310 PF01176 Translation initiation factor 1A / IF-1 NIES2134_124330 PF00344 SecY translocase NIES2134_124340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NIES2134_124350 PF03719 Ribosomal protein S5, C-terminal domain NIES2134_124350 PF00333 Ribosomal protein S5, N-terminal domain NIES2134_124360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NIES2134_124370 PF00347 Ribosomal protein L6 NIES2134_124380 PF00410 Ribosomal protein S8 NIES2134_124390 PF00281 Ribosomal protein L5 NIES2134_124390 PF00673 ribosomal L5P family C-terminus NIES2134_124400 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NIES2134_124400 PF00467 KOW motif NIES2134_124410 PF00238 Ribosomal protein L14p/L23e NIES2134_124420 PF00366 Ribosomal protein S17 NIES2134_124430 PF00831 Ribosomal L29 protein NIES2134_124440 PF00252 Ribosomal protein L16p/L10e NIES2134_124450 PF00189 Ribosomal protein S3, C-terminal domain NIES2134_124450 PF07650 KH domain NIES2134_124460 PF00237 Ribosomal protein L22p/L17e NIES2134_124470 PF00203 Ribosomal protein S19 NIES2134_124480 PF03947 Ribosomal Proteins L2, C-terminal domain NIES2134_124480 PF00181 Ribosomal Proteins L2, RNA binding domain NIES2134_124490 PF00276 Ribosomal protein L23 NIES2134_124500 PF00573 Ribosomal protein L4/L1 family NIES2134_124510 PF00297 Ribosomal protein L3 NIES2134_124520 PF01702 Queuine tRNA-ribosyltransferase NIES2134_124560 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_124560 PF01434 Peptidase family M41 NIES2134_124560 PF17862 AAA+ lid domain NIES2134_124590 PF02875 Mur ligase family, glutamate ligase domain NIES2134_124590 PF08245 Mur ligase middle domain NIES2134_124600 PF01594 AI-2E family transporter NIES2134_124630 PF02774 Semialdehyde dehydrogenase, dimerisation domain NIES2134_124630 PF01118 Semialdehyde dehydrogenase, NAD binding domain NIES2134_124640 PF00480 ROK family NIES2134_124650 PF03816 Cell envelope-related transcriptional attenuator domain NIES2134_124660 PF01926 50S ribosome-binding GTPase NIES2134_124660 PF01018 GTP1/OBG NIES2134_124680 PF00989 PAS fold NIES2134_124680 PF16736 Single Cache-like NIES2134_124680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NIES2134_124680 PF00512 His Kinase A (phospho-acceptor) domain NIES2134_124690 PF03023 Lipid II flippase MurJ NIES2134_124700 PF02768 DNA polymerase III beta subunit, C-terminal domain NIES2134_124700 PF02767 DNA polymerase III beta subunit, central domain NIES2134_124700 PF00712 DNA polymerase III beta subunit, N-terminal domain NIES2134_124730 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NIES2134_124740 PF17265 Family of unknown function (DUF5331) NIES2134_124750 PF00148 Nitrogenase component 1 type Oxidoreductase NIES2134_124760 PF11741 AMIN domain NIES2134_124760 PF00263 Bacterial type II and III secretion system protein NIES2134_124760 PF03958 Bacterial type II/III secretion system short domain NIES2134_124760 PF07660 Secretin and TonB N terminus short domain NIES2134_124800 PF00871 Acetokinase family NIES2134_124820 PF00156 Phosphoribosyl transferase domain NIES2134_124830 PF00860 Permease family NIES2134_124880 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NIES2134_124880 PF02142 MGS-like domain NIES2134_124880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NIES2134_124890 PF04025 Domain of unknown function (DUF370) NIES2134_124900 PF06827 Zinc finger found in FPG and IleRS NIES2134_124900 PF08264 Anticodon-binding domain of tRNA NIES2134_124900 PF00133 tRNA synthetases class I (I, L, M and V) NIES2134_124910 PF03652 Holliday junction resolvase NIES2134_124930 PF00266 Aminotransferase class-V NIES2134_124940 PF00551 Formyl transferase NIES2134_124950 PF00595 PDZ domain NIES2134_124950 PF03572 Peptidase family S41 NIES2134_124960 PF00395 S-layer homology domain NIES2134_124960 PF04966 Carbohydrate-selective porin, OprB family NIES2134_124970 PF12452 Protein of unknown function (DUF3685) NIES2134_124970 PF00072 Response regulator receiver domain NIES2134_125000 PF16363 GDP-mannose 4,6 dehydratase NIES2134_125010 PF00581 Rhodanese-like domain NIES2134_125030 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NIES2134_125060 PF12804 MobA-like NTP transferase domain NIES2134_125060 PF00132 Bacterial transferase hexapeptide (six repeats) NIES2134_125080 PF08486 Stage II sporulation protein NIES2134_125100 PF01765 Ribosome recycling factor NIES2134_125110 PF00696 Amino acid kinase family NIES2134_125130 PF00072 Response regulator receiver domain NIES2134_125130 PF00486 Transcriptional regulatory protein, C terminal NIES2134_125150 PF02861 Clp amino terminal domain, pathogenicity island component NIES2134_125150 PF17871 AAA lid domain NIES2134_125150 PF10431 C-terminal, D2-small domain, of ClpB protein NIES2134_125150 PF00004 ATPase family associated with various cellular activities (AAA) NIES2134_125150 PF07724 AAA domain (Cdc48 subfamily) NIES2134_125200 PF00378 Enoyl-CoA hydratase/isomerase NIES2134_125210 PF00580 UvrD/REP helicase N-terminal domain NIES2134_125210 PF13361 UvrD-like helicase C-terminal domain NIES2134_125250 PF00830 Ribosomal L28 family NIES2134_125260 PF01427 D-ala-D-ala dipeptidase NIES2134_125270 PF13326 Photosystem II Pbs27 NIES2134_125280 PF08719 Domain of unknown function (DUF1768) NIES2134_125290 PF08676 MutL C terminal dimerisation domain NIES2134_125290 PF01119 DNA mismatch repair protein, C-terminal domain NIES2134_125300 PF04127 DNA / pantothenate metabolism flavoprotein NIES2134_125300 PF02441 Flavoprotein NIES2134_125310 PF10742 Protein of unknown function (DUF2555) NIES2134_125350 PF00488 MutS domain V NIES2134_125350 PF01713 Smr domain NIES2134_125360 PF00152 tRNA synthetases class II (D, K and N) NIES2134_125360 PF01336 OB-fold nucleic acid binding domain NIES2134_125370 PF00999 Sodium/hydrogen exchanger family NIES2134_125370 PF00582 Universal stress protein family NIES2134_125380 PF00291 Pyridoxal-phosphate dependent enzyme NIES2134_125400 PF00475 Imidazoleglycerol-phosphate dehydratase