locus-tag class description TST_0001 PF00308 Bacterial dnaA protein TST_0001 PF08299 Bacterial dnaA protein helix-turn-helix TST_0001 PF11638 DnaA N-terminal domain TST_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain TST_0002 PF02767 DNA polymerase III beta subunit, central domain TST_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain TST_0003 PF01751 Toprim domain TST_0003 PF00986 DNA gyrase B subunit, carboxyl terminus TST_0003 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0003 PF00204 DNA gyrase B TST_0004 PF01425 Amidase TST_0005 PF02934 GatB/GatE catalytic domain TST_0005 PF02637 GatB domain TST_0006 PF00155 Aminotransferase class I and II TST_0007 PF02153 Prephenate dehydrogenase TST_0008 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TST_0008 PF02436 Conserved carboxylase domain TST_0008 PF00364 Biotin-requiring enzyme TST_0008 PF00289 Biotin carboxylase, N-terminal domain TST_0008 PF02785 Biotin carboxylase C-terminal domain TST_0008 PF00682 HMGL-like TST_0009 PF00909 Ammonium Transporter Family TST_0010 PF13187 4Fe-4S dicluster domain TST_0010 PF01645 Conserved region in glutamate synthase TST_0011 PF13247 4Fe-4S dicluster domain TST_0013 PF00310 Glutamine amidotransferases class-II TST_0015 PF01261 Xylose isomerase-like TIM barrel TST_0016 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TST_0018 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TST_0018 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TST_0019 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TST_0020 PF01861 Branched-chain polyamine synthase A C-terminal domain TST_0021 PF00582 Universal stress protein family TST_0022 PF01202 Shikimate kinase TST_0025 PF02163 Peptidase family M50 TST_0025 PF17820 PDZ domain TST_0026 PF00313 'Cold-shock' DNA-binding domain TST_0030 PF00111 2Fe-2S iron-sulfur cluster binding domain TST_0031 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TST_0031 PF07498 Rho termination factor, N-terminal domain TST_0031 PF07497 Rho termination factor, RNA-binding domain TST_0032 PF01996 F420-0:Gamma-glutamyl ligase TST_0032 PF00881 Nitroreductase family TST_0036 PF01170 Putative RNA methylase family UPF0020 TST_0036 PF02926 THUMP domain TST_0037 PF00860 Permease family TST_0040 PF00551 Formyl transferase TST_0041 PF02769 AIR synthase related protein, C-terminal domain TST_0041 PF00586 AIR synthase related protein, N-terminal domain TST_0042 PF00158 Sigma-54 interaction domain TST_0042 PF02954 Bacterial regulatory protein, Fis family TST_0042 PF00072 Response regulator receiver domain TST_0043 PF00672 HAMP domain TST_0043 PF00989 PAS fold TST_0043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0043 PF00512 His Kinase A (phospho-acceptor) domain TST_0044 PF01979 Amidohydrolase family TST_0044 PF13382 Adenine deaminase C-terminal domain TST_0045 PF01134 Glucose inhibited division protein A TST_0045 PF13932 GidA associated domain TST_0051 PF02660 Glycerol-3-phosphate acyltransferase TST_0055 PF03952 Enolase, N-terminal domain TST_0055 PF00113 Enolase, C-terminal TIM barrel domain TST_0056 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TST_0057 PF01209 ubiE/COQ5 methyltransferase family TST_0060 PF08369 Proto-chlorophyllide reductase 57 kD subunit TST_0060 PF00148 Nitrogenase component 1 type Oxidoreductase TST_0062 PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system TST_0064 PF00005 ABC transporter TST_0065 PF00924 Mechanosensitive ion channel TST_0065 PF12794 Mechanosensitive ion channel inner membrane domain 1 TST_0065 PF12795 Mechanosensitive ion channel porin domain TST_0066 PF07516 SecA Wing and Scaffold domain TST_0066 PF07517 SecA DEAD-like domain TST_0066 PF01043 SecA preprotein cross-linking domain TST_0066 PF02810 SEC-C motif TST_0067 PF02163 Peptidase family M50 TST_0068 PF07724 AAA domain (Cdc48 subfamily) TST_0068 PF00004 ATPase family associated with various cellular activities (AAA) TST_0069 PF00227 Proteasome subunit TST_0070 PF02899 Phage integrase, N-terminal SAM-like domain TST_0070 PF00589 Phage integrase family TST_0071 PF00625 Guanylate kinase TST_0072 PF03755 YicC-like family, N-terminal region TST_0072 PF08340 Domain of unknown function (DUF1732) TST_0073 PF02416 mttA/Hcf106 family TST_0075 PF00384 Molybdopterin oxidoreductase TST_0075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain TST_0075 PF01568 Molydopterin dinucleotide binding domain TST_0078 PF12801 4Fe-4S binding domain TST_0079 PF06463 Molybdenum Cofactor Synthesis C TST_0079 PF04055 Radical SAM superfamily TST_0081 PF01967 MoaC family TST_0081 PF00994 Probable molybdopterin binding domain TST_0082 PF12804 MobA-like NTP transferase domain TST_0084 PF00528 Binding-protein-dependent transport system inner membrane component TST_0085 PF03459 TOBE domain TST_0085 PF00005 ABC transporter TST_0086 PF00994 Probable molybdopterin binding domain TST_0086 PF02464 Competence-damaged protein TST_0087 PF03453 MoeA N-terminal region (domain I and II) TST_0087 PF00994 Probable molybdopterin binding domain TST_0087 PF03454 MoeA C-terminal region (domain IV) TST_0089 PF01926 50S ribosome-binding GTPase TST_0089 PF07650 KH domain TST_0090 PF02899 Phage integrase, N-terminal SAM-like domain TST_0090 PF00589 Phage integrase family TST_0092 PF01142 tRNA pseudouridine synthase D (TruD) TST_0093 PF01384 Phosphate transporter family TST_0094 PF01865 Protein of unknown function DUF47 TST_0095 PF00753 Metallo-beta-lactamase superfamily TST_0096 PF02075 Crossover junction endodeoxyribonuclease RuvC TST_0097 PF01709 Transcriptional regulator TST_0098 PF10672 S-adenosylmethionine-dependent methyltransferase TST_0098 PF01170 Putative RNA methylase family UPF0020 TST_0098 PF02926 THUMP domain TST_0099 PF05088 Bacterial NAD-glutamate dehydrogenase TST_0100 PF02576 RimP N-terminal domain TST_0100 PF17384 RimP C-terminal SH3 domain TST_0101 PF13184 NusA-like KH domain TST_0101 PF08529 NusA N-terminal domain TST_0101 PF00575 S1 RNA binding domain TST_0103 PF04760 Translation initiation factor IF-2, N-terminal region TST_0103 PF00009 Elongation factor Tu GTP binding domain TST_0103 PF11987 Translation-initiation factor 2 TST_0103 PF00009 Elongation factor Tu GTP binding domain TST_0103 PF04760 Translation initiation factor IF-2, N-terminal region TST_0103 PF11987 Translation-initiation factor 2 TST_0104 PF04456 Protein of unknown function (DUF503) TST_0105 PF02033 Ribosome-binding factor A TST_0106 PF01368 DHH family TST_0106 PF02272 DHHA1 domain TST_0107 PF00378 Enoyl-CoA hydratase/isomerase TST_0108 PF04055 Radical SAM superfamily TST_0108 PF06969 HemN C-terminal domain TST_0109 PF01654 Cytochrome bd terminal oxidase subunit I TST_0110 PF02322 Cytochrome bd terminal oxidase subunit II TST_0113 PF01381 Helix-turn-helix TST_0113 PF08671 Anti-repressor SinI TST_0114 PF02675 S-adenosylmethionine decarboxylase TST_0116 PF17284 Spermidine synthase tetramerisation domain TST_0117 PF01066 CDP-alcohol phosphatidyltransferase TST_0119 PF02527 rRNA small subunit methyltransferase G TST_0120 PF03673 Uncharacterised protein family (UPF0128) TST_0122 PF01207 Dihydrouridine synthase (Dus) TST_0124 PF17158 Membrane-associated sensor, integral membrane domain TST_0124 PF00990 Diguanylate cyclase, GGDEF domain TST_0126 PF06180 Cobalt chelatase (CbiK) TST_0127 PF00005 ABC transporter TST_0128 PF01061 ABC-2 type transporter TST_0129 PF01032 FecCD transport family TST_0130 PF00005 ABC transporter TST_0131 PF01497 Periplasmic binding protein TST_0132 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_0132 PF14824 Sirohaem biosynthesis protein central TST_0132 PF10414 Sirohaem synthase dimerisation region TST_0136 PF01807 CHC2 zinc finger TST_0136 PF10410 DnaB-helicase binding domain of primase TST_0136 PF08275 DNA primase catalytic core, N-terminal domain TST_0137 PF00140 Sigma-70 factor, region 1.2 TST_0137 PF03979 Sigma-70 factor, region 1.1 TST_0137 PF04545 Sigma-70, region 4 TST_0137 PF04546 Sigma-70, non-essential region TST_0137 PF04539 Sigma-70 region 3 TST_0137 PF04542 Sigma-70 region 2 TST_0143 PF07660 Secretin and TonB N terminus short domain TST_0143 PF03958 Bacterial type II/III secretion system short domain TST_0143 PF11741 AMIN domain TST_0143 PF00263 Bacterial type II and III secretion system protein TST_0144 PF01264 Chorismate synthase TST_0145 PF01202 Shikimate kinase TST_0147 PF01220 Dehydroquinase class II TST_0148 PF01321 Creatinase/Prolidase N-terminal domain TST_0148 PF00557 Metallopeptidase family M24 TST_0149 PF00216 Bacterial DNA-binding protein TST_0150 PF03807 NADP oxidoreductase coenzyme F420-dependent TST_0150 PF14748 Pyrroline-5-carboxylate reductase dimerisation TST_0151 PF17760 UvrA interaction domain TST_0151 PF17755 UvrA DNA-binding domain TST_0151 PF00005 ABC transporter TST_0153 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TST_0154 PF04002 RadC-like JAB domain TST_0155 PF12631 MnmE helical domain TST_0155 PF10396 GTP-binding protein TrmE N-terminus TST_0155 PF01926 50S ribosome-binding GTPase TST_0156 PF02096 60Kd inner membrane protein TST_0156 PF14849 YidC periplasmic domain TST_0157 PF01809 Putative membrane protein insertion efficiency factor TST_0158 PF00825 Ribonuclease P TST_0159 PF00468 Ribosomal protein L34 TST_0161 PF00669 Bacterial flagellin N-terminal helical region TST_0161 PF00700 Bacterial flagellin C-terminal helical region TST_0162 PF01966 HD domain TST_0162 PF11871 Domain of unknown function (DUF3391) TST_0164 PF00380 Ribosomal protein S9/S16 TST_0165 PF00572 Ribosomal protein L13 TST_0167 PF00171 Aldehyde dehydrogenase family TST_0169 PF08359 YsiA-like protein, C-terminal region TST_0169 PF00440 Bacterial regulatory proteins, tetR family TST_0170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TST_0170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TST_0170 PF00378 Enoyl-CoA hydratase/isomerase TST_0171 PF00108 Thiolase, N-terminal domain TST_0171 PF02803 Thiolase, C-terminal domain TST_0172 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TST_0172 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TST_0172 PF02770 Acyl-CoA dehydrogenase, middle domain TST_0174 PF00501 AMP-binding enzyme TST_0174 PF13193 AMP-binding enzyme C-terminal domain TST_0178 PF00465 Iron-containing alcohol dehydrogenase TST_0179 PF00171 Aldehyde dehydrogenase family TST_0181 PF00501 AMP-binding enzyme TST_0181 PF13193 AMP-binding enzyme C-terminal domain TST_0182 PF00501 AMP-binding enzyme TST_0182 PF13193 AMP-binding enzyme C-terminal domain TST_0183 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TST_0184 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TST_0185 PF01869 BadF/BadG/BcrA/BcrD ATPase family TST_0187 PF01909 Nucleotidyltransferase domain TST_0187 PF01966 HD domain TST_0187 PF08335 GlnD PII-uridylyltransferase TST_0188 PF00202 Aminotransferase class-III TST_0189 PF01578 Cytochrome C assembly protein TST_0190 PF05140 ResB-like family TST_0193 PF18073 Rubredoxin metal binding domain TST_0194 PF02559 CarD-like/TRCF domain TST_0196 PF02542 YgbB family TST_0196 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TST_0197 PF01590 GAF domain TST_0197 PF00360 Phytochrome region TST_0197 PF00563 EAL domain TST_0197 PF00990 Diguanylate cyclase, GGDEF domain TST_0199 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TST_0200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TST_0201 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TST_0203 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TST_0203 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit TST_0203 PF10531 SLBB domain TST_0204 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal TST_0204 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TST_0204 PF00384 Molybdopterin oxidoreductase TST_0205 PF00146 NADH dehydrogenase TST_0206 PF12838 4Fe-4S dicluster domain TST_0207 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TST_0208 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TST_0209 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TST_0209 PF00361 Proton-conducting membrane transporter TST_0210 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TST_0210 PF00361 Proton-conducting membrane transporter TST_0211 PF00361 Proton-conducting membrane transporter TST_0212 PF00291 Pyridoxal-phosphate dependent enzyme TST_0213 PF03461 TRCF domain TST_0213 PF00271 Helicase conserved C-terminal domain TST_0213 PF17757 UvrB interaction domain TST_0213 PF02559 CarD-like/TRCF domain TST_0213 PF00270 DEAD/DEAH box helicase TST_0223 PF13145 PPIC-type PPIASE domain TST_0230 PF09312 SurA N-terminal domain TST_0230 PF00639 PPIC-type PPIASE domain TST_0232 PF04023 FeoA domain TST_0232 PF07670 Nucleoside recognition TST_0232 PF17910 FeoB cytosolic helical domain TST_0232 PF07664 Ferrous iron transport protein B C terminus TST_0232 PF02421 Ferrous iron transport protein B TST_0234 PF01209 ubiE/COQ5 methyltransferase family TST_0236 PF07715 TonB-dependent Receptor Plug Domain TST_0236 PF00593 TonB dependent receptor TST_0240 PF02514 CobN/Magnesium Chelatase TST_0243 PF00291 Pyridoxal-phosphate dependent enzyme TST_0244 PF00440 Bacterial regulatory proteins, tetR family TST_0245 PF02321 Outer membrane efflux protein TST_0246 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TST_0247 PF00873 AcrB/AcrD/AcrF family TST_0249 PF03773 Predicted permease TST_0251 PF01914 MarC family integral membrane protein TST_0255 PF02397 Bacterial sugar transferase TST_0256 PF01050 Mannose-6-phosphate isomerase TST_0256 PF00483 Nucleotidyl transferase TST_0257 PF13439 Glycosyltransferase Family 4 TST_0257 PF00534 Glycosyl transferases group 1 TST_0258 PF00534 Glycosyl transferases group 1 TST_0258 PF13439 Glycosyltransferase Family 4 TST_0261 PF13181 Tetratricopeptide repeat TST_0264 PF00009 Elongation factor Tu GTP binding domain TST_0265 PF01507 Phosphoadenosine phosphosulfate reductase family TST_0267 PF04321 RmlD substrate binding domain TST_0268 PF16363 GDP-mannose 4,6 dehydratase TST_0269 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase TST_0270 PF00483 Nucleotidyl transferase TST_0272 PF02441 Flavoprotein TST_0272 PF04127 DNA / pantothenate metabolism flavoprotein TST_0278 PF01979 Amidohydrolase family TST_0279 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain TST_0279 PF00117 Glutamine amidotransferase class-I TST_0280 PF00300 Histidine phosphatase superfamily (branch 1) TST_0281 PF01632 Ribosomal protein L35 TST_0282 PF00453 Ribosomal protein L20 TST_0283 PF02080 TrkA-C domain TST_0283 PF02254 TrkA-N domain TST_0284 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain TST_0284 PF01409 tRNA synthetases class II core domain (F) TST_0285 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain TST_0285 PF01588 Putative tRNA binding domain TST_0285 PF03484 tRNA synthetase B5 domain TST_0285 PF03147 Ferredoxin-fold anticodon binding domain TST_0285 PF03483 B3/4 domain TST_0286 PF00334 Nucleoside diphosphate kinase TST_0287 PF08501 Shikimate dehydrogenase substrate binding domain TST_0287 PF01488 Shikimate / quinate 5-dehydrogenase TST_0288 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TST_0290 PF02472 Biopolymer transport protein ExbD/TolR TST_0291 PF01618 MotA/TolQ/ExbB proton channel family TST_0293 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TST_0294 PF00209 Sodium:neurotransmitter symporter family TST_0295 PF08032 RNA 2'-O ribose methyltransferase substrate binding TST_0295 PF00588 SpoU rRNA Methylase family TST_0296 PF01142 tRNA pseudouridine synthase D (TruD) TST_0299 PF01594 AI-2E family transporter TST_0301 PF00815 Histidinol dehydrogenase TST_0302 PF00391 PEP-utilising enzyme, mobile domain TST_0302 PF02896 PEP-utilising enzyme, TIM barrel domain TST_0302 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TST_0305 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TST_0305 PF01676 Metalloenzyme superfamily TST_0306 PF00501 AMP-binding enzyme TST_0306 PF13193 AMP-binding enzyme C-terminal domain TST_0307 PF00535 Glycosyl transferase family 2 TST_0308 PF01330 RuvA N terminal domain TST_0308 PF07499 RuvA, C-terminal domain TST_0309 PF05491 RuvB C-terminal winged helix domain TST_0309 PF05496 Holliday junction DNA helicase RuvB P-loop domain TST_0309 PF17864 RuvB AAA lid domain TST_0310 PF02677 Epoxyqueuosine reductase QueH TST_0311 PF01702 Queuine tRNA-ribosyltransferase TST_0312 PF00563 EAL domain TST_0312 PF00990 Diguanylate cyclase, GGDEF domain TST_0312 PF03707 Bacterial signalling protein N terminal repeat TST_0313 PF00692 dUTPase TST_0315 PF00989 PAS fold TST_0315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0315 PF00512 His Kinase A (phospho-acceptor) domain TST_0317 PF06750 Bacterial Peptidase A24 N-terminal domain TST_0317 PF01478 Type IV leader peptidase family TST_0318 PF00301 Rubredoxin TST_0318 PF01613 Flavin reductase like domain TST_0322 PF00535 Glycosyl transferase family 2 TST_0325 PF03631 Virulence factor BrkB TST_0326 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TST_0326 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_0327 PF03448 MgtE intracellular N domain TST_0327 PF01769 Divalent cation transporter TST_0327 PF00571 CBS domain TST_0328 PF01926 50S ribosome-binding GTPase TST_0328 PF07650 KH domain TST_0331 PF01467 Cytidylyltransferase-like TST_0332 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TST_0332 PF00672 HAMP domain TST_0332 PF02743 Cache domain TST_0333 PF00156 Phosphoribosyl transferase domain TST_0334 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TST_0334 PF07685 CobB/CobQ-like glutamine amidotransferase domain TST_0336 PF01880 Desulfoferrodoxin TST_0336 PF06397 Desulfoferrodoxin, N-terminal domain TST_0337 PF00753 Metallo-beta-lactamase superfamily TST_0337 PF00258 Flavodoxin TST_0338 PF10417 C-terminal domain of 1-Cys peroxiredoxin TST_0338 PF00578 AhpC/TSA family TST_0339 PF01292 Prokaryotic cytochrome b561 TST_0341 PF01145 SPFH domain / Band 7 family TST_0341 PF16200 C-terminal region of band_7 TST_0347 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain TST_0347 PF02769 AIR synthase related protein, C-terminal domain TST_0347 PF00586 AIR synthase related protein, N-terminal domain TST_0348 PF01327 Polypeptide deformylase TST_0349 PF01197 Ribosomal protein L31 TST_0350 PF02511 Thymidylate synthase complementing protein TST_0351 PF03462 PCRF domain TST_0351 PF00472 RF-1 domain TST_0352 PF00216 Bacterial DNA-binding protein TST_0353 PF03772 Competence protein TST_0353 PF13567 Domain of unknown function (DUF4131) TST_0353 PF00753 Metallo-beta-lactamase superfamily TST_0354 PF00579 tRNA synthetases class I (W and Y) TST_0355 PF01625 Peptide methionine sulfoxide reductase TST_0356 PF02782 FGGY family of carbohydrate kinases, C-terminal domain TST_0356 PF00370 FGGY family of carbohydrate kinases, N-terminal domain TST_0357 PF01266 FAD dependent oxidoreductase TST_0357 PF16901 C-terminal domain of alpha-glycerophosphate oxidase TST_0358 PF02913 FAD linked oxidases, C-terminal domain TST_0358 PF01565 FAD binding domain TST_0360 PF00578 AhpC/TSA family TST_0363 PF00012 Hsp70 protein TST_0365 PF13411 MerR HTH family regulatory protein TST_0366 PF02861 Clp amino terminal domain, pathogenicity island component TST_0366 PF10431 C-terminal, D2-small domain, of ClpB protein TST_0366 PF00004 ATPase family associated with various cellular activities (AAA) TST_0366 PF07724 AAA domain (Cdc48 subfamily) TST_0366 PF17871 AAA lid domain TST_0367 PF04545 Sigma-70, region 4 TST_0367 PF04539 Sigma-70 region 3 TST_0367 PF04542 Sigma-70 region 2 TST_0367 PF00140 Sigma-70 factor, region 1.2 TST_0367 PF03979 Sigma-70 factor, region 1.1 TST_0368 PF00465 Iron-containing alcohol dehydrogenase TST_0372 PF00263 Bacterial type II and III secretion system protein TST_0372 PF03958 Bacterial type II/III secretion system short domain TST_0375 PF00437 Type II/IV secretion system protein TST_0376 PF00482 Type II secretion system (T2SS), protein F TST_0377 PF02646 RmuC family TST_0379 PF01297 Zinc-uptake complex component A periplasmic TST_0380 PF12169 DNA polymerase III subunits gamma and tau domain III TST_0381 PF02575 YbaB/EbfC DNA-binding family TST_0382 PF02132 RecR protein TST_0382 PF13662 Toprim domain TST_0385 PF01008 Initiation factor 2 subunit family TST_0387 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TST_0387 PF02770 Acyl-CoA dehydrogenase, middle domain TST_0387 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TST_0388 PF00117 Glutamine amidotransferase class-I TST_0388 PF00958 GMP synthase C terminal domain TST_0388 PF02540 NAD synthase TST_0390 PF01245 Ribosomal protein L19 TST_0391 PF09936 SAM-dependent RNA methyltransferase TST_0392 PF01746 tRNA (Guanine-1)-methyltransferase TST_0393 PF01782 RimM N-terminal domain TST_0393 PF05239 PRC-barrel domain TST_0395 PF00886 Ribosomal protein S16 TST_0396 PF02881 SRP54-type protein, helical bundle domain TST_0396 PF00448 SRP54-type protein, GTPase domain TST_0396 PF02978 Signal peptide binding domain TST_0398 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal TST_0398 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal TST_0399 PF02515 CoA-transferase family III TST_0400 PF02515 CoA-transferase family III TST_0401 PF02515 CoA-transferase family III TST_0402 PF02515 CoA-transferase family III TST_0403 PF02699 Preprotein translocase subunit TST_0404 PF07549 SecD/SecF GG Motif TST_0404 PF02355 Protein export membrane protein TST_0405 PF02355 Protein export membrane protein TST_0405 PF07549 SecD/SecF GG Motif TST_0407 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle TST_0408 PF00814 Glycoprotease family TST_0409 PF01327 Polypeptide deformylase TST_0410 PF01842 ACT domain TST_0411 PF01734 Patatin-like phospholipase TST_0414 PF01613 Flavin reductase like domain TST_0416 PF00753 Metallo-beta-lactamase superfamily TST_0416 PF16123 Hydroxyacylglutathione hydrolase C-terminus TST_0417 PF09339 IclR helix-turn-helix domain TST_0417 PF01614 Bacterial transcriptional regulator TST_0419 PF01699 Sodium/calcium exchanger protein TST_0421 PF00459 Inositol monophosphatase family TST_0422 PF10150 Ribonuclease E/G family TST_0422 PF00575 S1 RNA binding domain TST_0424 PF00005 ABC transporter TST_0425 PF02403 Seryl-tRNA synthetase N-terminal domain TST_0425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TST_0426 PF09115 DNA polymerase III, delta subunit, C terminal TST_0427 PF04468 PSP1 C-terminal conserved region TST_0428 PF01588 Putative tRNA binding domain TST_0428 PF08264 Anticodon-binding domain of tRNA TST_0428 PF09334 tRNA synthetases class I (M) TST_0429 PF01026 TatD related DNase TST_0430 PF01614 Bacterial transcriptional regulator TST_0430 PF09339 IclR helix-turn-helix domain TST_0435 PF00005 ABC transporter TST_0436 PF02405 Permease MlaE TST_0437 PF01597 Glycine cleavage H-protein TST_0438 PF12627 Probable RNA and SrmB- binding site of polymerase A TST_0438 PF12626 Polymerase A arginine-rich C-terminus TST_0438 PF01743 Poly A polymerase head domain TST_0442 PF00005 ABC transporter TST_0442 PF12399 Branched-chain amino acid ATP-binding cassette transporter TST_0443 PF00309 Sigma-54 factor, Activator interacting domain (AID) TST_0443 PF04552 Sigma-54, DNA binding domain TST_0443 PF04963 Sigma-54 factor, core binding domain TST_0444 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein TST_0444 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus TST_0445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit TST_0445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 TST_0446 PF07475 HPr Serine kinase C-terminal domain TST_0446 PF02603 HPr Serine kinase N terminus TST_0447 PF03668 P-loop ATPase protein family TST_0448 PF00381 PTS HPr component phosphorylation site TST_0449 PF00391 PEP-utilising enzyme, mobile domain TST_0449 PF05524 PEP-utilising enzyme, N-terminal TST_0449 PF02896 PEP-utilising enzyme, TIM barrel domain TST_0450 PF01138 3' exoribonuclease family, domain 1 TST_0450 PF00013 KH domain TST_0450 PF03725 3' exoribonuclease family, domain 2 TST_0450 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain TST_0450 PF00575 S1 RNA binding domain TST_0451 PF00312 Ribosomal protein S15 TST_0452 PF01509 TruB family pseudouridylate synthase (N terminal domain) TST_0452 PF16198 tRNA pseudouridylate synthase B C-terminal domain TST_0457 PF00072 Response regulator receiver domain TST_0457 PF00486 Transcriptional regulatory protein, C terminal TST_0458 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0458 PF00512 His Kinase A (phospho-acceptor) domain TST_0458 PF00672 HAMP domain TST_0460 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase TST_0461 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TST_0461 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TST_0461 PF02770 Acyl-CoA dehydrogenase, middle domain TST_0462 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TST_0462 PF02770 Acyl-CoA dehydrogenase, middle domain TST_0462 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TST_0465 PF00664 ABC transporter transmembrane region TST_0465 PF00005 ABC transporter TST_0466 PF02684 Lipid-A-disaccharide synthetase TST_0468 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TST_0468 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TST_0469 PF06230 LpxI C-terminal domain TST_0469 PF17930 LpxI N-terminal domain TST_0471 PF00120 Glutamine synthetase, catalytic domain TST_0471 PF03951 Glutamine synthetase, beta-Grasp domain TST_0472 PF01938 TRAM domain TST_0472 PF04055 Radical SAM superfamily TST_0472 PF00919 Uncharacterized protein family UPF0004 TST_0473 PF02577 Bifunctional nuclease TST_0474 PF17854 FtsK alpha domain TST_0474 PF13491 4TM region of DNA translocase FtsK/SpoIIIE TST_0474 PF01580 FtsK/SpoIIIE family TST_0474 PF09397 Ftsk gamma domain TST_0475 PF01950 Fructose-1,6-bisphosphatase TST_0476 PF00480 ROK family TST_0478 PF01008 Initiation factor 2 subunit family TST_0479 PF02594 Uncharacterised ACR, YggU family COG1872 TST_0480 PF02325 YGGT family TST_0481 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TST_0481 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain TST_0481 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain TST_0482 PF01464 Transglycosylase SLT domain TST_0482 PF01476 LysM domain TST_0485 PF01975 Survival protein SurE TST_0486 PF00872 Transposase, Mutator family TST_0487 PF01370 NAD dependent epimerase/dehydratase family TST_0494 PF00589 Phage integrase family TST_0494 PF02899 Phage integrase, N-terminal SAM-like domain TST_0498 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TST_0499 PF00270 DEAD/DEAH box helicase TST_0499 PF00271 Helicase conserved C-terminal domain TST_0499 PF17191 RecG wedge domain TST_0500 PF02915 Rubrerythrin TST_0503 PF00795 Carbon-nitrogen hydrolase TST_0504 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase TST_0505 PF13180 PDZ domain TST_0505 PF17820 PDZ domain TST_0509 PF14535 AMP-binding enzyme C-terminal domain TST_0509 PF00501 AMP-binding enzyme TST_0511 PF01551 Peptidase family M23 TST_0511 PF08460 Bacterial SH3 domain TST_0514 PF00266 Aminotransferase class-V TST_0516 PF00586 AIR synthase related protein, N-terminal domain TST_0516 PF02769 AIR synthase related protein, C-terminal domain TST_0517 PF01467 Cytidylyltransferase-like TST_0517 PF00293 NUDIX domain TST_0518 PF00994 Probable molybdopterin binding domain TST_0518 PF02464 Competence-damaged protein TST_0518 PF18146 Damage-inducible protein CinA KH domain TST_0520 PF01966 HD domain TST_0520 PF13286 Phosphohydrolase-associated domain TST_0521 PF00202 Aminotransferase class-III TST_0522 PF01145 SPFH domain / Band 7 family TST_0522 PF16200 C-terminal region of band_7 TST_0524 PF00119 ATP synthase A chain TST_0525 PF00137 ATP synthase subunit C TST_0526 PF06971 Putative DNA-binding protein N-terminus TST_0526 PF02629 CoA binding domain TST_0527 PF00543 Nitrogen regulatory protein P-II TST_0528 PF02502 Ribose/Galactose Isomerase TST_0529 PF00464 Serine hydroxymethyltransferase TST_0530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TST_0531 PF03477 ATP cone domain TST_0532 PF02386 Cation transport protein TST_0533 PF00571 CBS domain TST_0533 PF01595 Cyclin M transmembrane N-terminal domain TST_0533 PF03471 Transporter associated domain TST_0534 PF00491 Arginase family TST_0535 PF16199 Radical_SAM C-terminal domain TST_0535 PF04055 Radical SAM superfamily TST_0536 PF00528 Binding-protein-dependent transport system inner membrane component TST_0537 PF00829 Ribosomal prokaryotic L21 protein TST_0538 PF01016 Ribosomal L27 protein TST_0539 PF01926 50S ribosome-binding GTPase TST_0539 PF09269 Domain of unknown function (DUF1967) TST_0539 PF01018 GTP1/OBG TST_0540 PF00696 Amino acid kinase family TST_0540 PF01472 PUA domain TST_0541 PF00171 Aldehyde dehydrogenase family TST_0542 PF01467 Cytidylyltransferase-like TST_0545 PF00482 Type II secretion system (T2SS), protein F TST_0546 PF01925 Sulfite exporter TauE/SafE TST_0547 PF01521 Iron-sulphur cluster biosynthesis TST_0547 PF01106 NifU-like domain TST_0552 PF00990 Diguanylate cyclase, GGDEF domain TST_0554 PF08486 Stage II sporulation protein TST_0555 PF02903 Alpha amylase, N-terminal ig-like domain TST_0555 PF00128 Alpha amylase, catalytic domain TST_0561 PF04055 Radical SAM superfamily TST_0561 PF06968 Biotin and Thiamin Synthesis associated domain TST_0563 PF17158 Membrane-associated sensor, integral membrane domain TST_0563 PF00990 Diguanylate cyclase, GGDEF domain TST_0564 PF01595 Cyclin M transmembrane N-terminal domain TST_0564 PF03471 Transporter associated domain TST_0564 PF00571 CBS domain TST_0565 PF02091 Glycyl-tRNA synthetase alpha subunit TST_0566 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TST_0566 PF01676 Metalloenzyme superfamily TST_0567 PF00682 HMGL-like TST_0567 PF08502 LeuA allosteric (dimerisation) domain TST_0570 PF01522 Polysaccharide deacetylase TST_0571 PF00588 SpoU rRNA Methylase family TST_0573 PF12105 SpoU, rRNA methylase, C-terminal TST_0573 PF00588 SpoU rRNA Methylase family TST_0574 PF08245 Mur ligase middle domain TST_0575 PF03949 Malic enzyme, NAD binding domain TST_0575 PF00390 Malic enzyme, N-terminal domain TST_0575 PF01515 Phosphate acetyl/butaryl transferase TST_0576 PF02548 Ketopantoate hydroxymethyltransferase TST_0577 PF02569 Pantoate-beta-alanine ligase TST_0578 PF02261 Aspartate decarboxylase TST_0579 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region TST_0579 PF01872 RibD C-terminal domain TST_0580 PF02405 Permease MlaE TST_0581 PF00005 ABC transporter TST_0585 PF02465 Flagellar hook-associated protein 2 N-terminus TST_0585 PF07195 Flagellar hook-associated protein 2 C-terminus TST_0585 PF07196 Flagellin hook IN motif TST_0586 PF02561 Flagellar protein FliS TST_0589 PF00708 Acylphosphatase TST_0590 PF16912 Glucose dehydrogenase C-terminus TST_0590 PF08240 Alcohol dehydrogenase GroES-like domain TST_0592 PF00294 pfkB family carbohydrate kinase TST_0595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TST_0595 PF00460 Flagella basal body rod protein TST_0596 PF00460 Flagella basal body rod protein TST_0596 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TST_0598 PF02107 Flagellar L-ring protein TST_0599 PF02119 Flagellar P-ring protein TST_0603 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TST_0603 PF07196 Flagellin hook IN motif TST_0604 PF00669 Bacterial flagellin N-terminal helical region TST_0605 PF02623 FliW protein TST_0607 PF00085 Thioredoxin TST_0609 PF03652 Holliday junction resolvase TST_0610 PF03309 Type III pantothenate kinase TST_0614 PF13439 Glycosyltransferase Family 4 TST_0614 PF00534 Glycosyl transferases group 1 TST_0616 PF00133 tRNA synthetases class I (I, L, M and V) TST_0616 PF06827 Zinc finger found in FPG and IleRS TST_0616 PF08264 Anticodon-binding domain of tRNA TST_0617 PF01252 Signal peptidase (SPase) II TST_0618 PF01790 Prolipoprotein diacylglyceryl transferase TST_0620 PF02867 Ribonucleotide reductase, barrel domain TST_0620 PF00317 Ribonucleotide reductase, all-alpha domain TST_0620 PF03477 ATP cone domain TST_0623 PF03023 Lipid II flippase MurJ TST_0626 PF00460 Flagella basal body rod protein TST_0627 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TST_0627 PF00460 Flagella basal body rod protein TST_0628 PF02049 Flagellar hook-basal body complex protein FliE TST_0629 PF08345 Flagellar M-ring protein C-terminal TST_0629 PF01514 Secretory protein of YscJ/FliF family TST_0630 PF14841 FliG middle domain TST_0630 PF14842 FliG N-terminal domain TST_0630 PF01706 FliG C-terminal domain TST_0632 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TST_0632 PF02874 ATP synthase alpha/beta family, beta-barrel domain TST_0632 PF18269 T3SS EscN ATPase C-terminal domain TST_0637 PF00460 Flagella basal body rod protein TST_0637 PF07559 Flagellar basal body protein FlaE TST_0637 PF06429 Flagellar basal body rod FlgEFG protein C-terminal TST_0639 PF01618 MotA/TolQ/ExbB proton channel family TST_0640 PF13677 Membrane MotB of proton-channel complex MotA/MotB TST_0640 PF00691 OmpA family TST_0641 PF03748 Flagellar basal body-associated protein FliL TST_0642 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TST_0644 PF00813 FliP family TST_0645 PF01313 Bacterial export proteins, family 3 TST_0646 PF01311 Bacterial export proteins, family 1 TST_0647 PF01312 FlhB HrpN YscU SpaS Family TST_0648 PF00771 FHIPEP family TST_0649 PF00448 SRP54-type protein, GTPase domain TST_0650 PF10609 NUBPL iron-transfer P-loop NTPase TST_0651 PF04545 Sigma-70, region 4 TST_0651 PF04539 Sigma-70 region 3 TST_0651 PF04542 Sigma-70 region 2 TST_0652 PF00072 Response regulator receiver domain TST_0652 PF01339 CheB methylesterase TST_0653 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TST_0653 PF02154 Flagellar motor switch protein FliM TST_0654 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term TST_0654 PF04509 CheC-like family TST_0655 PF07883 Cupin domain TST_0655 PF01381 Helix-turn-helix TST_0656 PF00108 Thiolase, N-terminal domain TST_0656 PF02803 Thiolase, C-terminal domain TST_0657 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TST_0657 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TST_0658 PF00378 Enoyl-CoA hydratase/isomerase TST_0659 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TST_0659 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TST_0659 PF02770 Acyl-CoA dehydrogenase, middle domain TST_0660 PF01012 Electron transfer flavoprotein domain TST_0661 PF01012 Electron transfer flavoprotein domain TST_0661 PF00766 Electron transfer flavoprotein FAD-binding domain TST_0662 PF02754 Cysteine-rich domain TST_0662 PF13183 4Fe-4S dicluster domain TST_0662 PF02665 Nitrate reductase gamma subunit TST_0665 PF01171 PP-loop family TST_0667 PF01739 CheR methyltransferase, SAM binding domain TST_0669 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase TST_0670 PF00950 ABC 3 transport family TST_0671 PF00005 ABC transporter TST_0672 PF00348 Polyprenyl synthetase TST_0673 PF01871 AMMECR1 TST_0675 PF00849 RNA pseudouridylate synthase TST_0675 PF01479 S4 domain TST_0677 PF00990 Diguanylate cyclase, GGDEF domain TST_0678 PF04055 Radical SAM superfamily TST_0678 PF00919 Uncharacterized protein family UPF0004 TST_0679 PF00072 Response regulator receiver domain TST_0679 PF00990 Diguanylate cyclase, GGDEF domain TST_0680 PF12627 Probable RNA and SrmB- binding site of polymerase A TST_0680 PF01743 Poly A polymerase head domain TST_0680 PF13735 tRNA nucleotidyltransferase domain 2 putative TST_0682 PF00155 Aminotransferase class I and II TST_0685 PF13545 Crp-like helix-turn-helix domain TST_0685 PF00027 Cyclic nucleotide-binding domain TST_0686 PF03063 Prismane/CO dehydrogenase family TST_0688 PF02308 MgtC family TST_0691 PF00990 Diguanylate cyclase, GGDEF domain TST_0693 PF01242 6-pyruvoyl tetrahydropterin synthase TST_0694 PF00155 Aminotransferase class I and II TST_0695 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_0695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TST_0696 PF00175 Oxidoreductase NAD-binding domain TST_0696 PF00970 Oxidoreductase FAD-binding domain TST_0696 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B TST_0697 PF01464 Transglycosylase SLT domain TST_0697 PF01476 LysM domain TST_0700 PF12002 MgsA AAA+ ATPase C terminal TST_0700 PF16193 AAA C-terminal domain TST_0700 PF00004 ATPase family associated with various cellular activities (AAA) TST_0701 PF01812 5-formyltetrahydrofolate cyclo-ligase family TST_0702 PF12072 Domain of unknown function (DUF3552) TST_0702 PF00013 KH domain TST_0702 PF01966 HD domain TST_0703 PF13277 YmdB-like protein TST_0704 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain TST_0704 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain TST_0705 PF02601 Exonuclease VII, large subunit TST_0705 PF13742 OB-fold nucleic acid binding domain TST_0707 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_0708 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_0709 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_0712 PF03749 Sugar fermentation stimulation protein RE domain TST_0712 PF17746 SfsA N-terminal OB domain TST_0713 PF01875 Memo-like protein TST_0718 PF01725 Ham1 family TST_0719 PF01066 CDP-alcohol phosphatidyltransferase TST_0721 PF00375 Sodium:dicarboxylate symporter family TST_0725 PF01964 Radical SAM ThiC family TST_0726 PF02581 Thiamine monophosphate synthase TST_0728 PF01168 Alanine racemase, N-terminal domain TST_0729 PF11146 Protein of unknown function (DUF2905) TST_0730 PF01648 4'-phosphopantetheinyl transferase superfamily TST_0730 PF17837 4'-phosphopantetheinyl transferase N-terminal domain TST_0731 PF03060 Nitronate monooxygenase TST_0735 PF00072 Response regulator receiver domain TST_0746 PF04542 Sigma-70 region 2 TST_0746 PF04545 Sigma-70, region 4 TST_0749 PF00082 Subtilase family TST_0750 PF02537 CrcB-like protein, Camphor Resistance (CrcB) TST_0751 PF02641 Uncharacterized ACR, COG1993 TST_0752 PF00350 Dynamin family TST_0755 PF03649 Uncharacterised protein family (UPF0014) TST_0757 PF02538 Hydantoinase B/oxoprolinase TST_0758 PF06968 Biotin and Thiamin Synthesis associated domain TST_0758 PF04055 Radical SAM superfamily TST_0763 PF00872 Transposase, Mutator family TST_0764 PF01791 DeoC/LacD family aldolase TST_0765 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_0765 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TST_0767 PF01381 Helix-turn-helix TST_0767 PF07883 Cupin domain TST_0768 PF17820 PDZ domain TST_0768 PF13180 PDZ domain TST_0770 PF05362 Lon protease (S16) C-terminal proteolytic domain TST_0770 PF00004 ATPase family associated with various cellular activities (AAA) TST_0770 PF02190 ATP-dependent protease La (LON) substrate-binding domain TST_0771 PF01668 SmpB protein TST_0772 PF01968 Hydantoinase/oxoprolinase TST_0772 PF05378 Hydantoinase/oxoprolinase N-terminal region TST_0773 PF00872 Transposase, Mutator family TST_0775 PF00158 Sigma-54 interaction domain TST_0775 PF02954 Bacterial regulatory protein, Fis family TST_0775 PF00072 Response regulator receiver domain TST_0776 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0776 PF00512 His Kinase A (phospho-acceptor) domain TST_0776 PF00989 PAS fold TST_0776 PF08447 PAS fold TST_0777 PF02515 CoA-transferase family III TST_0778 PF02515 CoA-transferase family III TST_0781 PF00490 Delta-aminolevulinic acid dehydratase TST_0782 PF00330 Aconitase family (aconitate hydratase) TST_0783 PF00285 Citrate synthase, C-terminal domain TST_0784 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain TST_0784 PF00056 lactate/malate dehydrogenase, NAD binding domain TST_0786 PF05683 Fumarase C-terminus TST_0786 PF05681 Fumarate hydratase (Fumerase) TST_0787 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit TST_0789 PF00890 FAD binding domain TST_0789 PF02910 Fumarate reductase flavoprotein C-term TST_0790 PF13085 2Fe-2S iron-sulfur cluster binding domain TST_0791 PF08442 ATP-grasp domain TST_0791 PF00549 CoA-ligase TST_0792 PF00549 CoA-ligase TST_0792 PF02629 CoA binding domain TST_0794 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TST_0794 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase TST_0794 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TST_0795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TST_0797 PF00132 Bacterial transferase hexapeptide (six repeats) TST_0798 PF06421 GTP-binding protein LepA C-terminus TST_0798 PF00679 Elongation factor G C-terminus TST_0798 PF00009 Elongation factor Tu GTP binding domain TST_0798 PF03144 Elongation factor Tu domain 2 TST_0799 PF10502 Signal peptidase, peptidase S26 TST_0805 PF17762 HTH domain found in ParB protein TST_0805 PF02195 ParB-like nuclease domain TST_0806 PF00465 Iron-containing alcohol dehydrogenase TST_0807 PF00730 HhH-GPD superfamily base excision DNA repair protein TST_0807 PF10576 Iron-sulfur binding domain of endonuclease III TST_0807 PF00633 Helix-hairpin-helix motif TST_0808 PF01751 Toprim domain TST_0808 PF17915 Reverse gyrase zinc finger TST_0808 PF01131 DNA topoisomerase TST_0808 PF00270 DEAD/DEAH box helicase TST_0809 PF04551 GcpE protein TST_0812 PF04055 Radical SAM superfamily TST_0813 PF00580 UvrD/REP helicase N-terminal domain TST_0813 PF13361 UvrD-like helicase C-terminal domain TST_0815 PF01336 OB-fold nucleic acid binding domain TST_0815 PF11490 DNA polymerase III polC-type N-terminus II TST_0815 PF07733 Bacterial DNA polymerase III alpha NTPase domain TST_0815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TST_0815 PF14579 Helix-hairpin-helix motif TST_0815 PF02811 PHP domain TST_0815 PF00929 Exonuclease TST_0817 PF03705 CheR methyltransferase, all-alpha domain TST_0817 PF01739 CheR methyltransferase, SAM binding domain TST_0819 PF01520 N-acetylmuramoyl-L-alanine amidase TST_0819 PF11741 AMIN domain TST_0820 PF01687 Riboflavin kinase TST_0820 PF06574 FAD synthetase TST_0821 PF01259 SAICAR synthetase TST_0822 PF02082 Transcriptional regulator TST_0823 PF02789 Cytosol aminopeptidase family, N-terminal domain TST_0823 PF00883 Cytosol aminopeptidase family, catalytic domain TST_0825 PF02895 Signal transducing histidine kinase, homodimeric domain TST_0825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0825 PF01627 Hpt domain TST_0825 PF01584 CheW-like domain TST_0825 PF07194 P2 response regulator binding domain TST_0826 PF01584 CheW-like domain TST_0827 PF00072 Response regulator receiver domain TST_0827 PF01584 CheW-like domain TST_0828 PF01676 Metalloenzyme superfamily TST_0828 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TST_0829 PF01078 Magnesium chelatase, subunit ChlI TST_0829 PF13335 Magnesium chelatase, subunit ChlI C-terminal TST_0831 PF00579 tRNA synthetases class I (W and Y) TST_0831 PF01479 S4 domain TST_0832 PF00202 Aminotransferase class-III TST_0833 PF00534 Glycosyl transferases group 1 TST_0835 PF00982 Glycosyltransferase family 20 TST_0838 PF00266 Aminotransferase class-V TST_0839 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain TST_0839 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TST_0839 PF01842 ACT domain TST_0840 PF13393 Histidyl-tRNA synthetase TST_0841 PF00709 Adenylosuccinate synthetase TST_0843 PF00378 Enoyl-CoA hydratase/isomerase TST_0848 PF03099 Biotin/lipoate A/B protein ligase family TST_0848 PF08279 HTH domain TST_0848 PF02237 Biotin protein ligase C terminal domain TST_0849 PF01368 DHH family TST_0849 PF10141 Single-strand DNA-specific exonuclease, C terminal domain TST_0849 PF17768 RecJ OB domain TST_0849 PF02272 DHHA1 domain TST_0850 PF05175 Methyltransferase small domain TST_0851 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TST_0851 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TST_0851 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TST_0851 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TST_0852 PF13654 AAA domain TST_0852 PF05362 Lon protease (S16) C-terminal proteolytic domain TST_0853 PF02224 Cytidylate kinase TST_0855 PF02911 Formyl transferase, C-terminal domain TST_0855 PF00551 Formyl transferase TST_0856 PF02683 Cytochrome C biogenesis protein transmembrane region TST_0857 PF00533 BRCA1 C Terminus (BRCT) domain TST_0857 PF12826 Helix-hairpin-helix motif TST_0857 PF03120 NAD-dependent DNA ligase OB-fold domain TST_0857 PF01653 NAD-dependent DNA ligase adenylation domain TST_0859 PF09190 DALR domain TST_0859 PF01406 tRNA synthetases class I (C) catalytic domain TST_0860 PF00072 Response regulator receiver domain TST_0860 PF01966 HD domain TST_0861 PF01894 Uncharacterised protein family UPF0047 TST_0862 PF03819 MazG nucleotide pyrophosphohydrolase domain TST_0864 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family TST_0864 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain TST_0865 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component TST_0866 PF01869 BadF/BadG/BcrA/BcrD ATPase family TST_0867 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain TST_0867 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TST_0868 PF02874 ATP synthase alpha/beta family, beta-barrel domain TST_0868 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TST_0869 PF00231 ATP synthase TST_0870 PF00306 ATP synthase alpha/beta chain, C terminal domain TST_0870 PF02874 ATP synthase alpha/beta family, beta-barrel domain TST_0870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain TST_0871 PF00213 ATP synthase delta (OSCP) subunit TST_0872 PF00430 ATP synthase B/B' CF(0) TST_0873 PF00430 ATP synthase B/B' CF(0) TST_0874 PF17762 HTH domain found in ParB protein TST_0874 PF02195 ParB-like nuclease domain TST_0875 PF13614 AAA domain TST_0877 PF00762 Ferrochelatase TST_0878 PF13145 PPIC-type PPIASE domain TST_0879 PF00156 Phosphoribosyl transferase domain TST_0880 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TST_0880 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TST_0881 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE TST_0882 PF01040 UbiA prenyltransferase family TST_0884 PF01066 CDP-alcohol phosphatidyltransferase TST_0884 PF12804 MobA-like NTP transferase domain TST_0885 PF04851 Type III restriction enzyme, res subunit TST_0885 PF00271 Helicase conserved C-terminal domain TST_0885 PF18319 PriA DNA helicase Cys-rich region (CRR) domain TST_0885 PF17764 3′ DNA-binding domain (3′BD) TST_0885 PF18074 Primosomal protein N C-terminal domain TST_0888 PF02673 Bacitracin resistance protein BacA TST_0892 PF03572 Peptidase family S41 TST_0892 PF13180 PDZ domain TST_0893 PF01842 ACT domain TST_0893 PF00800 Prephenate dehydratase TST_0893 PF01817 Chorismate mutase type II TST_0894 PF03840 Preprotein translocase SecG subunit TST_0895 PF00121 Triosephosphate isomerase TST_0896 PF00162 Phosphoglycerate kinase TST_0897 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain TST_0897 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TST_0898 PF03129 Anticodon binding domain TST_0898 PF13393 Histidyl-tRNA synthetase TST_0899 PF01336 OB-fold nucleic acid binding domain TST_0899 PF02938 GAD domain TST_0899 PF00152 tRNA synthetases class II (D, K and N) TST_0901 PF05958 tRNA (Uracil-5-)-methyltransferase TST_0903 PF00211 Adenylate and Guanylate cyclase catalytic domain TST_0904 PF11849 Domain of unknown function (DUF3369) TST_0907 PF01713 Smr domain TST_0907 PF00488 MutS domain V TST_0908 PF09424 Yqey-like protein TST_0910 PF02142 MGS-like domain TST_0910 PF01808 AICARFT/IMPCHase bienzyme TST_0911 PF00850 Histone deacetylase domain TST_0912 PF01118 Semialdehyde dehydrogenase, NAD binding domain TST_0912 PF02774 Semialdehyde dehydrogenase, dimerisation domain TST_0913 PF00571 CBS domain TST_0913 PF00478 IMP dehydrogenase / GMP reductase domain TST_0914 PF01966 HD domain TST_0916 PF02894 Oxidoreductase family, C-terminal alpha/beta domain TST_0916 PF01408 Oxidoreductase family, NAD-binding Rossmann fold TST_0918 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain TST_0918 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_0919 PF02780 Transketolase, C-terminal domain TST_0919 PF02779 Transketolase, pyrimidine binding domain TST_0919 PF00456 Transketolase, thiamine diphosphate binding domain TST_0920 PF01458 Uncharacterized protein family (UPF0051) TST_0921 PF00005 ABC transporter TST_0922 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TST_0922 PF00005 ABC transporter TST_0924 PF00109 Beta-ketoacyl synthase, N-terminal domain TST_0924 PF02801 Beta-ketoacyl synthase, C-terminal domain TST_0925 PF00293 NUDIX domain TST_0925 PF13344 Haloacid dehalogenase-like hydrolase TST_0926 PF00156 Phosphoribosyl transferase domain TST_0928 PF01430 Hsp33 protein TST_0929 PF00654 Voltage gated chloride channel TST_0930 PF04055 Radical SAM superfamily TST_0931 PF00905 Penicillin binding protein transpeptidase domain TST_0931 PF00912 Transglycosylase TST_0933 PF00072 Response regulator receiver domain TST_0933 PF00158 Sigma-54 interaction domain TST_0933 PF02954 Bacterial regulatory protein, Fis family TST_0934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_0934 PF00512 His Kinase A (phospho-acceptor) domain TST_0934 PF00989 PAS fold TST_0935 PF00753 Metallo-beta-lactamase superfamily TST_0938 PF03186 CobD/Cbib protein TST_0939 PF02277 Phosphoribosyltransferase TST_0940 PF00677 Lumazine binding domain TST_0941 PF10672 S-adenosylmethionine-dependent methyltransferase TST_0941 PF17785 PUA-like domain TST_0943 PF04085 rod shape-determining protein MreC TST_0945 PF00535 Glycosyl transferase family 2 TST_0947 PF03466 LysR substrate binding domain TST_0947 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family TST_0948 PF00009 Elongation factor Tu GTP binding domain TST_0948 PF03144 Elongation factor Tu domain 2 TST_0948 PF09106 Elongation factor SelB, winged helix TST_0948 PF09107 Elongation factor SelB, winged helix TST_0948 PF09105 Elongation factor SelB, winged helix TST_0949 PF03841 L-seryl-tRNA selenium transferase TST_0949 PF12390 Selenocysteine synthase N terminal TST_0950 PF00378 Enoyl-CoA hydratase/isomerase TST_0951 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain TST_0951 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain TST_0952 PF00990 Diguanylate cyclase, GGDEF domain TST_0953 PF00563 EAL domain TST_0953 PF01590 GAF domain TST_0953 PF00360 Phytochrome region TST_0953 PF00990 Diguanylate cyclase, GGDEF domain TST_0954 PF06745 KaiC TST_0956 PF00872 Transposase, Mutator family TST_0961 PF02021 Uncharacterised protein family UPF0102 TST_0962 PF01351 Ribonuclease HII TST_0963 PF03989 DNA gyrase C-terminal domain, beta-propeller TST_0963 PF00521 DNA gyrase/topoisomerase IV, subunit A TST_0964 PF02686 Glu-tRNAGln amidotransferase C subunit TST_0965 PF00580 UvrD/REP helicase N-terminal domain TST_0965 PF13361 UvrD-like helicase C-terminal domain TST_0966 PF00654 Voltage gated chloride channel TST_0967 PF01380 SIS domain TST_0968 PF00132 Bacterial transferase hexapeptide (six repeats) TST_0968 PF14602 Hexapeptide repeat of succinyl-transferase TST_0968 PF12804 MobA-like NTP transferase domain TST_0969 PF00378 Enoyl-CoA hydratase/isomerase TST_0970 PF01370 NAD dependent epimerase/dehydratase family TST_0971 PF00202 Aminotransferase class-III TST_0972 PF01300 Telomere recombination TST_0973 PF00731 AIR carboxylase TST_0974 PF00438 S-adenosylmethionine synthetase, N-terminal domain TST_0974 PF02772 S-adenosylmethionine synthetase, central domain TST_0974 PF02773 S-adenosylmethionine synthetase, C-terminal domain TST_0975 PF01066 CDP-alcohol phosphatidyltransferase TST_0976 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus TST_0976 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TST_0977 PF05221 S-adenosyl-L-homocysteine hydrolase TST_0977 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TST_0978 PF00206 Lyase TST_0978 PF14698 Argininosuccinate lyase C-terminal TST_0978 PF00583 Acetyltransferase (GNAT) family TST_0979 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain TST_0979 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain TST_0981 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain TST_0981 PF01612 3'-5' exonuclease TST_0981 PF00476 DNA polymerase family A TST_0981 PF01367 5'-3' exonuclease, C-terminal SAM fold TST_0982 PF01121 Dephospho-CoA kinase TST_0984 PF00141 Peroxidase TST_0985 PF01475 Ferric uptake regulator family TST_0988 PF00872 Transposase, Mutator family TST_0990 PF00872 Transposase, Mutator family TST_0992 PF00563 EAL domain TST_0992 PF03707 Bacterial signalling protein N terminal repeat TST_0992 PF00990 Diguanylate cyclase, GGDEF domain TST_0993 PF00072 Response regulator receiver domain TST_0993 PF00196 Bacterial regulatory proteins, luxR family TST_0998 PF03783 Curli production assembly/transport component CsgG TST_0999 PF01293 Phosphoenolpyruvate carboxykinase TST_1000 PF03091 CutA1 divalent ion tolerance protein TST_1001 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TST_1001 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TST_1002 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TST_1003 PF00561 alpha/beta hydrolase fold TST_1004 PF01230 HIT domain TST_1006 PF08264 Anticodon-binding domain of tRNA TST_1006 PF10458 Valyl tRNA synthetase tRNA binding arm TST_1006 PF00133 tRNA synthetases class I (I, L, M and V) TST_1007 PF02606 Tetraacyldisaccharide-1-P 4'-kinase TST_1008 PF00905 Penicillin binding protein transpeptidase domain TST_1008 PF03717 Penicillin-binding Protein dimerisation domain TST_1009 PF01098 Cell cycle protein TST_1010 PF02545 Maf-like protein TST_1011 PF17782 DprA winged helix domain TST_1011 PF02481 DNA recombination-mediator protein A TST_1012 PF01751 Toprim domain TST_1012 PF01131 DNA topoisomerase TST_1012 PF01396 Topoisomerase DNA binding C4 zinc finger TST_1014 PF13476 AAA domain TST_1017 PF02092 Glycyl-tRNA synthetase beta subunit TST_1021 PF12557 Cob(I)alamin adenosyltransferase N terminal TST_1021 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TST_1023 PF01144 Coenzyme A transferase TST_1024 PF01144 Coenzyme A transferase TST_1025 PF02310 B12 binding domain TST_1026 PF00378 Enoyl-CoA hydratase/isomerase TST_1028 PF09827 CRISPR associated protein Cas2 TST_1029 PF01867 CRISPR associated protein Cas1 TST_1031 PF18019 HD domain TST_1031 PF00270 DEAD/DEAH box helicase TST_1031 PF18395 Cas3 C-terminal domain TST_1037 PF02824 TGS domain TST_1037 PF13291 ACT domain TST_1037 PF04607 Region found in RelA / SpoT proteins TST_1038 PF02146 Sir2 family TST_1039 PF00586 AIR synthase related protein, N-terminal domain TST_1039 PF02769 AIR synthase related protein, C-terminal domain TST_1040 PF01464 Transglycosylase SLT domain TST_1041 PF00448 SRP54-type protein, GTPase domain TST_1041 PF02881 SRP54-type protein, helical bundle domain TST_1042 PF02390 Putative methyltransferase TST_1043 PF13188 PAS domain TST_1043 PF00072 Response regulator receiver domain TST_1043 PF00512 His Kinase A (phospho-acceptor) domain TST_1043 PF08448 PAS fold TST_1043 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_1044 PF03764 Elongation factor G, domain IV TST_1044 PF00679 Elongation factor G C-terminus TST_1044 PF14492 Elongation Factor G, domain II TST_1044 PF03144 Elongation factor Tu domain 2 TST_1044 PF00009 Elongation factor Tu GTP binding domain TST_1047 PF12327 FtsZ family, C-terminal domain TST_1047 PF00091 Tubulin/FtsZ family, GTPase domain TST_1048 PF07478 D-ala D-ala ligase C-terminus TST_1048 PF01820 D-ala D-ala ligase N-terminus TST_1049 PF01565 FAD binding domain TST_1049 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain TST_1050 PF01225 Mur ligase family, catalytic domain TST_1050 PF08245 Mur ligase middle domain TST_1050 PF02875 Mur ligase family, glutamate ligase domain TST_1051 PF03033 Glycosyltransferase family 28 N-terminal domain TST_1051 PF04101 Glycosyltransferase family 28 C-terminal domain TST_1052 PF08245 Mur ligase middle domain TST_1052 PF02875 Mur ligase family, glutamate ligase domain TST_1053 PF00953 Glycosyl transferase family 4 TST_1053 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 TST_1054 PF01225 Mur ligase family, catalytic domain TST_1054 PF02875 Mur ligase family, glutamate ligase domain TST_1054 PF08245 Mur ligase middle domain TST_1055 PF08245 Mur ligase middle domain TST_1055 PF01225 Mur ligase family, catalytic domain TST_1055 PF02875 Mur ligase family, glutamate ligase domain TST_1056 PF01795 MraW methylase family TST_1057 PF00293 NUDIX domain TST_1060 PF00072 Response regulator receiver domain TST_1060 PF00158 Sigma-54 interaction domain TST_1060 PF02954 Bacterial regulatory protein, Fis family TST_1061 PF02142 MGS-like domain TST_1061 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TST_1061 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TST_1062 PF00924 Mechanosensitive ion channel TST_1063 PF00108 Thiolase, N-terminal domain TST_1063 PF02803 Thiolase, C-terminal domain TST_1064 PF00749 tRNA synthetases class I (E and Q), catalytic domain TST_1065 PF01113 Dihydrodipicolinate reductase, N-terminus TST_1065 PF05173 Dihydrodipicolinate reductase, C-terminus TST_1066 PF00701 Dihydrodipicolinate synthetase family TST_1067 PF01678 Diaminopimelate epimerase TST_1068 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain TST_1068 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain TST_1069 PF00128 Alpha amylase, catalytic domain TST_1069 PF02903 Alpha amylase, N-terminal ig-like domain TST_1069 PF00686 Starch binding domain TST_1070 PF14698 Argininosuccinate lyase C-terminal TST_1070 PF00206 Lyase TST_1071 PF00437 Type II/IV secretion system protein TST_1072 PF00437 Type II/IV secretion system protein TST_1072 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain TST_1073 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg TST_1073 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II TST_1074 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TST_1075 PF00990 Diguanylate cyclase, GGDEF domain TST_1075 PF00498 FHA domain TST_1075 PF00563 EAL domain TST_1076 PF03061 Thioesterase superfamily TST_1079 PF13361 UvrD-like helicase C-terminal domain TST_1079 PF00580 UvrD/REP helicase N-terminal domain TST_1079 PF12705 PD-(D/E)XK nuclease superfamily TST_1080 PF01791 DeoC/LacD family aldolase TST_1081 PF01959 3-dehydroquinate synthase II TST_1083 PF14535 AMP-binding enzyme C-terminal domain TST_1083 PF00501 AMP-binding enzyme TST_1084 PF07690 Major Facilitator Superfamily TST_1087 PF00440 Bacterial regulatory proteins, tetR family TST_1087 PF17925 Tetracyclin repressor-like, C-terminal domain TST_1088 PF00171 Aldehyde dehydrogenase family TST_1089 PF13607 Succinyl-CoA ligase like flavodoxin domain TST_1089 PF00583 Acetyltransferase (GNAT) family TST_1089 PF13380 CoA binding domain TST_1090 PF00440 Bacterial regulatory proteins, tetR family TST_1092 PF00872 Transposase, Mutator family TST_1093 PF01416 tRNA pseudouridine synthase TST_1094 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain TST_1094 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain TST_1096 PF18693 TRAM domain TST_1096 PF04055 Radical SAM superfamily TST_1096 PF00919 Uncharacterized protein family UPF0004 TST_1099 PF00881 Nitroreductase family TST_1102 PF04452 RNA methyltransferase TST_1103 PF14572 Phosphoribosyl synthetase-associated domain TST_1103 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TST_1104 PF01180 Dihydroorotate dehydrogenase TST_1105 PF17151 Periplasmic sensor domain TST_1105 PF00990 Diguanylate cyclase, GGDEF domain TST_1107 PF01048 Phosphorylase superfamily TST_1109 PF01934 Protein of unknown function DUF86 TST_1112 PF01661 Macro domain TST_1112 PF05496 Holliday junction DNA helicase RuvB P-loop domain TST_1112 PF12002 MgsA AAA+ ATPase C terminal TST_1112 PF16193 AAA C-terminal domain TST_1115 PF13426 PAS domain TST_1115 PF00563 EAL domain TST_1115 PF00990 Diguanylate cyclase, GGDEF domain TST_1116 PF13603 Leucyl-tRNA synthetase, Domain 2 TST_1116 PF08264 Anticodon-binding domain of tRNA TST_1116 PF09334 tRNA synthetases class I (M) TST_1116 PF00133 tRNA synthetases class I (I, L, M and V) TST_1118 PF13426 PAS domain TST_1118 PF00672 HAMP domain TST_1118 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TST_1119 PF03707 Bacterial signalling protein N terminal repeat TST_1119 PF00990 Diguanylate cyclase, GGDEF domain TST_1119 PF00563 EAL domain TST_1121 PF01628 HrcA protein C terminal domain TST_1122 PF01025 GrpE TST_1123 PF00684 DnaJ central domain TST_1123 PF01556 DnaJ C terminal domain TST_1123 PF00226 DnaJ domain TST_1126 PF13193 AMP-binding enzyme C-terminal domain TST_1126 PF00501 AMP-binding enzyme TST_1131 PF00850 Histone deacetylase domain TST_1134 PF13091 PLD-like domain TST_1135 PF02547 Queuosine biosynthesis protein TST_1136 PF00483 Nucleotidyl transferase TST_1140 PF00005 ABC transporter TST_1143 PF01891 Cobalt uptake substrate-specific transmembrane region TST_1143 PF13190 PDGLE domain TST_1144 PF01750 Hydrogenase maturation protease TST_1145 PF00374 Nickel-dependent hydrogenase TST_1146 PF03916 Polysulphide reductase, NrfD TST_1147 PF13247 4Fe-4S dicluster domain TST_1148 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal TST_1148 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TST_1149 PF00902 Sec-independent protein translocase protein (TatC) TST_1150 PF02416 mttA/Hcf106 family TST_1151 PF02492 CobW/HypB/UreG, nucleotide-binding domain TST_1152 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TST_1153 PF01455 HupF/HypC family TST_1154 PF01300 Telomere recombination TST_1154 PF07503 HypF finger TST_1154 PF17788 HypF Kae1-like domain TST_1154 PF00708 Acylphosphatase TST_1155 PF01924 Hydrogenase formation hypA family TST_1156 PF00586 AIR synthase related protein, N-terminal domain TST_1156 PF02769 AIR synthase related protein, C-terminal domain TST_1157 PF07729 FCD domain TST_1157 PF00392 Bacterial regulatory proteins, gntR family TST_1158 PF04172 LrgB-like family TST_1162 PF00872 Transposase, Mutator family TST_1164 PF01934 Protein of unknown function DUF86 TST_1165 PF14437 MafB19-like deaminase TST_1166 PF04055 Radical SAM superfamily TST_1168 PF04055 Radical SAM superfamily TST_1169 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF TST_1169 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF TST_1169 PF01189 16S rRNA methyltransferase RsmB/F TST_1170 PF00749 tRNA synthetases class I (E and Q), catalytic domain TST_1171 PF00881 Nitroreductase family TST_1172 PF07883 Cupin domain TST_1172 PF01381 Helix-turn-helix TST_1173 PF01063 Amino-transferase class IV TST_1175 PF00301 Rubredoxin TST_1176 PF02073 Thermophilic metalloprotease (M29) TST_1177 PF06508 Queuosine biosynthesis protein QueC TST_1181 PF02580 D-Tyr-tRNA(Tyr) deacylase TST_1182 PF00753 Metallo-beta-lactamase superfamily TST_1184 PF00114 Pilin (bacterial filament) TST_1184 PF07963 Prokaryotic N-terminal methylation motif TST_1185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TST_1185 PF00672 HAMP domain TST_1185 PF02743 Cache domain TST_1188 PF02568 Thiamine biosynthesis protein (ThiI) TST_1188 PF02926 THUMP domain TST_1189 PF03968 OstA-like protein TST_1189 PF04453 LPS transport system D TST_1190 PF04608 Phosphatidylglycerophosphatase A TST_1191 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ TST_1192 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain TST_1192 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III TST_1192 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I TST_1192 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II TST_1194 PF01649 Ribosomal protein S20 TST_1196 PF00118 TCP-1/cpn60 chaperonin family TST_1197 PF00166 Chaperonin 10 Kd subunit TST_1202 PF02515 CoA-transferase family III TST_1203 PF02515 CoA-transferase family III TST_1205 PF09210 Domain of unknown function (DUF1957) TST_1205 PF03065 Glycosyl hydrolase family 57 TST_1208 PF09094 Domain of unknown function (DUF1925) TST_1208 PF03065 Glycosyl hydrolase family 57 TST_1208 PF09095 Domain of unknown function (DUF1926) TST_1210 PF00483 Nucleotidyl transferase TST_1211 PF08338 Domain of unknown function (DUF1731) TST_1211 PF01370 NAD dependent epimerase/dehydratase family TST_1213 PF00872 Transposase, Mutator family TST_1216 PF07885 Ion channel TST_1216 PF02254 TrkA-N domain TST_1217 PF00027 Cyclic nucleotide-binding domain TST_1217 PF07885 Ion channel TST_1218 PF08241 Methyltransferase domain TST_1219 PF00571 CBS domain TST_1219 PF01380 SIS domain TST_1220 PF00793 DAHP synthetase I family TST_1221 PF00117 Glutamine amidotransferase class-I TST_1221 PF06418 CTP synthase N-terminus TST_1222 PF02348 Cytidylyltransferase TST_1223 PF00011 Hsp20/alpha crystallin family TST_1224 PF03372 Endonuclease/Exonuclease/phosphatase family TST_1225 PF00072 Response regulator receiver domain TST_1225 PF00486 Transcriptional regulatory protein, C terminal TST_1226 PF00512 His Kinase A (phospho-acceptor) domain TST_1226 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase TST_1226 PF00989 PAS fold TST_1226 PF16736 Single Cache-like TST_1236 PF00990 Diguanylate cyclase, GGDEF domain TST_1237 PF00925 GTP cyclohydrolase II TST_1237 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase TST_1238 PF00885 6,7-dimethyl-8-ribityllumazine synthase TST_1239 PF01029 NusB family TST_1240 PF01926 50S ribosome-binding GTPase TST_1240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal TST_1241 PF02618 YceG-like family TST_1242 PF05362 Lon protease (S16) C-terminal proteolytic domain TST_1242 PF00004 ATPase family associated with various cellular activities (AAA) TST_1242 PF02190 ATP-dependent protease La (LON) substrate-binding domain TST_1243 PF07724 AAA domain (Cdc48 subfamily) TST_1243 PF10431 C-terminal, D2-small domain, of ClpB protein TST_1243 PF06689 ClpX C4-type zinc finger TST_1244 PF00574 Clp protease TST_1245 PF05698 Bacterial trigger factor protein (TF) C-terminus TST_1245 PF05697 Bacterial trigger factor protein (TF) TST_1245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase TST_1246 PF07690 Major Facilitator Superfamily TST_1248 PF00005 ABC transporter TST_1249 PF00005 ABC transporter TST_1250 PF13533 Biotin-lipoyl like TST_1251 PF00529 HlyD membrane-fusion protein of T1SS TST_1251 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TST_1253 PF00440 Bacterial regulatory proteins, tetR family TST_1257 PF03971 Monomeric isocitrate dehydrogenase TST_1258 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain TST_1258 PF01464 Transglycosylase SLT domain TST_1259 PF00682 HMGL-like TST_1259 PF08502 LeuA allosteric (dimerisation) domain TST_1260 PF13840 ACT domain TST_1260 PF01842 ACT domain TST_1260 PF00696 Amino acid kinase family TST_1261 PF04166 Pyridoxal phosphate biosynthetic protein PdxA TST_1262 PF01479 S4 domain TST_1263 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_1266 PF00155 Aminotransferase class I and II TST_1267 PF01926 50S ribosome-binding GTPase TST_1267 PF06071 Protein of unknown function (DUF933) TST_1268 PF01066 CDP-alcohol phosphatidyltransferase TST_1269 PF02666 Phosphatidylserine decarboxylase TST_1270 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain TST_1270 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain TST_1271 PF10369 Small subunit of acetolactate synthase TST_1271 PF01842 ACT domain TST_1272 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TST_1272 PF00205 Thiamine pyrophosphate enzyme, central domain TST_1272 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TST_1273 PF00920 Dehydratase family TST_1275 PF00583 Acetyltransferase (GNAT) family TST_1276 PF00814 Glycoprotease family TST_1277 PF02910 Fumarate reductase flavoprotein C-term TST_1277 PF00890 FAD binding domain TST_1279 PF02445 Quinolinate synthetase A protein TST_1280 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain TST_1280 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain TST_1282 PF05567 Neisseria PilC beta-propeller domain TST_1283 PF00114 Pilin (bacterial filament) TST_1283 PF07963 Prokaryotic N-terminal methylation motif TST_1291 PF02887 Pyruvate kinase, alpha/beta domain TST_1291 PF00391 PEP-utilising enzyme, mobile domain TST_1291 PF00224 Pyruvate kinase, barrel domain TST_1292 PF01467 Cytidylyltransferase-like TST_1292 PF00294 pfkB family carbohydrate kinase TST_1294 PF02525 Flavodoxin-like fold TST_1295 PF05198 Translation initiation factor IF-3, N-terminal domain TST_1295 PF00707 Translation initiation factor IF-3, C-terminal domain TST_1296 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TST_1296 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TST_1296 PF03129 Anticodon binding domain TST_1299 PF01312 FlhB HrpN YscU SpaS Family TST_1304 PF00753 Metallo-beta-lactamase superfamily TST_1304 PF16123 Hydroxyacylglutathione hydrolase C-terminus TST_1305 PF14489 QueF-like protein TST_1306 PF10576 Iron-sulfur binding domain of endonuclease III TST_1306 PF00633 Helix-hairpin-helix motif TST_1306 PF00730 HhH-GPD superfamily base excision DNA repair protein TST_1309 PF14716 Helix-hairpin-helix domain TST_1309 PF02811 PHP domain TST_1309 PF14791 DNA polymerase beta thumb TST_1310 PF08148 DSHCT (NUC185) domain TST_1310 PF00271 Helicase conserved C-terminal domain TST_1310 PF00270 DEAD/DEAH box helicase TST_1313 PF01139 tRNA-splicing ligase RtcB TST_1316 PF13411 MerR HTH family regulatory protein TST_1319 PF10609 NUBPL iron-transfer P-loop NTPase TST_1320 PF10609 NUBPL iron-transfer P-loop NTPase TST_1323 PF02621 Menaquinone biosynthesis TST_1324 PF00035 Double-stranded RNA binding motif TST_1324 PF14622 Ribonuclease-III-like TST_1325 PF00109 Beta-ketoacyl synthase, N-terminal domain TST_1325 PF02801 Beta-ketoacyl synthase, C-terminal domain TST_1326 PF00550 Phosphopantetheine attachment site TST_1328 PF00698 Acyl transferase domain TST_1329 PF03060 Nitronate monooxygenase TST_1330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TST_1330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TST_1331 PF02504 Fatty acid synthesis protein TST_1332 PF01783 Ribosomal L32p protein family TST_1337 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_1339 PF02649 Type I GTP cyclohydrolase folE2 TST_1340 PF03330 Lytic transglycolase TST_1341 PF00005 ABC transporter TST_1341 PF08352 Oligopeptide/dipeptide transporter, C-terminal region TST_1342 PF02515 CoA-transferase family III TST_1345 PF02540 NAD synthase TST_1345 PF00795 Carbon-nitrogen hydrolase TST_1346 PF04493 Endonuclease V TST_1347 PF00206 Lyase TST_1347 PF10397 Adenylosuccinate lyase C-terminus TST_1348 PF00025 ADP-ribosylation factor family TST_1354 PF01226 Formate/nitrite transporter TST_1355 PF01513 ATP-NAD kinase TST_1356 PF02457 DisA bacterial checkpoint controller nucleotide-binding TST_1357 PF00809 Pterin binding enzyme TST_1358 PF17862 AAA+ lid domain TST_1358 PF06480 FtsH Extracellular TST_1358 PF01434 Peptidase family M41 TST_1358 PF00004 ATPase family associated with various cellular activities (AAA) TST_1360 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) TST_1363 PF02310 B12 binding domain TST_1363 PF01642 Methylmalonyl-CoA mutase TST_1364 PF00364 Biotin-requiring enzyme TST_1364 PF00682 HMGL-like TST_1364 PF02436 Conserved carboxylase domain TST_1365 PF00289 Biotin carboxylase, N-terminal domain TST_1365 PF02785 Biotin carboxylase C-terminal domain TST_1365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TST_1366 PF01039 Carboxyl transferase domain TST_1367 PF00398 Ribosomal RNA adenine dimethylase TST_1368 PF00923 Transaldolase/Fructose-6-phosphate aldolase TST_1369 PF05192 MutS domain III TST_1369 PF05190 MutS family domain IV TST_1369 PF00488 MutS domain V TST_1369 PF01624 MutS domain I TST_1369 PF05188 MutS domain II TST_1371 PF00691 OmpA family TST_1374 PF13439 Glycosyltransferase Family 4 TST_1374 PF00534 Glycosyl transferases group 1 TST_1376 PF03710 Glutamate-ammonia ligase adenylyltransferase TST_1376 PF08335 GlnD PII-uridylyltransferase TST_1378 PF12704 MacB-like periplasmic core domain TST_1378 PF00005 ABC transporter TST_1378 PF02687 FtsX-like permease family TST_1380 PF00005 ABC transporter TST_1380 PF12704 MacB-like periplasmic core domain TST_1380 PF02687 FtsX-like permease family TST_1381 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion TST_1383 PF00440 Bacterial regulatory proteins, tetR family TST_1384 PF00764 Arginosuccinate synthase TST_1390 PF00342 Phosphoglucose isomerase TST_1391 PF00271 Helicase conserved C-terminal domain TST_1391 PF04851 Type III restriction enzyme, res subunit TST_1391 PF02151 UvrB/uvrC motif TST_1391 PF12344 Ultra-violet resistance protein B TST_1391 PF17757 UvrB interaction domain TST_1393 PF08334 Type II secretion system (T2SS), protein G TST_1393 PF07963 Prokaryotic N-terminal methylation motif TST_1395 PF07963 Prokaryotic N-terminal methylation motif TST_1395 PF11612 Type II secretion system (T2SS), protein J TST_1400 PF02130 Uncharacterized protein family UPF0054 TST_1401 PF01966 HD domain TST_1401 PF07698 7TM receptor with intracellular HD hydrolase TST_1401 PF07697 7TM-HD extracellular TST_1402 PF02562 PhoH-like protein TST_1403 PF01138 3' exoribonuclease family, domain 1 TST_1403 PF03725 3' exoribonuclease family, domain 2 TST_1404 PF17848 Acetyl-coA carboxylase zinc finger domain TST_1404 PF01039 Carboxyl transferase domain TST_1405 PF01134 Glucose inhibited division protein A TST_1406 PF01196 Ribosomal protein L17 TST_1407 PF01000 RNA polymerase Rpb3/RpoA insert domain TST_1407 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain TST_1407 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain TST_1408 PF01479 S4 domain TST_1408 PF00163 Ribosomal protein S4/S9 N-terminal domain TST_1409 PF00411 Ribosomal protein S11 TST_1410 PF00416 Ribosomal protein S13/S18 TST_1411 PF00444 Ribosomal protein L36 TST_1412 PF01176 Translation initiation factor 1A / IF-1 TST_1413 PF00557 Metallopeptidase family M24 TST_1414 PF05191 Adenylate kinase, active site lid TST_1415 PF00344 SecY translocase TST_1416 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TST_1417 PF00327 Ribosomal protein L30p/L7e TST_1418 PF00333 Ribosomal protein S5, N-terminal domain TST_1418 PF03719 Ribosomal protein S5, C-terminal domain TST_1419 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast TST_1420 PF00347 Ribosomal protein L6 TST_1421 PF00410 Ribosomal protein S8 TST_1422 PF00253 Ribosomal protein S14p/S29e TST_1423 PF00281 Ribosomal protein L5 TST_1423 PF00673 ribosomal L5P family C-terminus TST_1424 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 TST_1424 PF00467 KOW motif TST_1425 PF00238 Ribosomal protein L14p/L23e TST_1427 PF00831 Ribosomal L29 protein TST_1428 PF00252 Ribosomal protein L16p/L10e TST_1429 PF00189 Ribosomal protein S3, C-terminal domain TST_1429 PF07650 KH domain TST_1430 PF00237 Ribosomal protein L22p/L17e TST_1431 PF00203 Ribosomal protein S19 TST_1432 PF03947 Ribosomal Proteins L2, C-terminal domain TST_1432 PF00181 Ribosomal Proteins L2, RNA binding domain TST_1433 PF00276 Ribosomal protein L23 TST_1434 PF00573 Ribosomal protein L4/L1 family TST_1435 PF00297 Ribosomal protein L3 TST_1436 PF00338 Ribosomal protein S10p/S20e TST_1437 PF03144 Elongation factor Tu domain 2 TST_1437 PF00009 Elongation factor Tu GTP binding domain TST_1437 PF03143 Elongation factor Tu C-terminal domain TST_1438 PF00009 Elongation factor Tu GTP binding domain TST_1438 PF14492 Elongation Factor G, domain II TST_1438 PF00679 Elongation factor G C-terminus TST_1438 PF03764 Elongation factor G, domain IV TST_1438 PF03144 Elongation factor Tu domain 2 TST_1439 PF00177 Ribosomal protein S7p/S5e TST_1440 PF00164 Ribosomal protein S12/S23 TST_1441 PF04983 RNA polymerase Rpb1, domain 3 TST_1441 PF05000 RNA polymerase Rpb1, domain 4 TST_1441 PF04998 RNA polymerase Rpb1, domain 5 TST_1441 PF00623 RNA polymerase Rpb1, domain 2 TST_1441 PF04997 RNA polymerase Rpb1, domain 1 TST_1442 PF04560 RNA polymerase Rpb2, domain 7 TST_1442 PF00562 RNA polymerase Rpb2, domain 6 TST_1442 PF10385 RNA polymerase beta subunit external 1 domain TST_1442 PF04565 RNA polymerase Rpb2, domain 3 TST_1442 PF04561 RNA polymerase Rpb2, domain 2 TST_1442 PF04563 RNA polymerase beta subunit TST_1443 PF00542 Ribosomal protein L7/L12 C-terminal domain TST_1443 PF16320 Ribosomal protein L7/L12 dimerisation domain TST_1444 PF00466 Ribosomal protein L10 TST_1445 PF00687 Ribosomal protein L1p/L10e family TST_1446 PF03946 Ribosomal protein L11, N-terminal domain TST_1446 PF00298 Ribosomal protein L11, RNA binding domain TST_1447 PF02357 Transcription termination factor nusG TST_1447 PF00467 KOW motif TST_1449 PF00471 Ribosomal protein L33 TST_1450 PF03143 Elongation factor Tu C-terminal domain TST_1450 PF00009 Elongation factor Tu GTP binding domain TST_1450 PF03144 Elongation factor Tu domain 2 TST_1453 PF03009 Glycerophosphoryl diester phosphodiesterase family TST_1455 PF01208 Uroporphyrinogen decarboxylase (URO-D) TST_1456 PF01189 16S rRNA methyltransferase RsmB/F TST_1456 PF01029 NusB family TST_1458 PF01910 Thiamine-binding protein TST_1459 PF02146 Sir2 family TST_1460 PF00011 Hsp20/alpha crystallin family TST_1461 PF04023 FeoA domain TST_1461 PF17910 FeoB cytosolic helical domain TST_1461 PF07670 Nucleoside recognition TST_1461 PF07664 Ferrous iron transport protein B C terminus TST_1461 PF02421 Ferrous iron transport protein B TST_1465 PF00271 Helicase conserved C-terminal domain TST_1465 PF00270 DEAD/DEAH box helicase TST_1468 PF00700 Bacterial flagellin C-terminal helical region TST_1468 PF00669 Bacterial flagellin N-terminal helical region TST_1468 PF00669 Bacterial flagellin N-terminal helical region TST_1468 PF00700 Bacterial flagellin C-terminal helical region TST_1470 PF16363 GDP-mannose 4,6 dehydratase TST_1471 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TST_1473 PF03102 NeuB family TST_1473 PF08666 SAF domain TST_1474 PF02350 UDP-N-acetylglucosamine 2-epimerase TST_1475 PF00483 Nucleotidyl transferase TST_1476 PF13472 GDSL-like Lipase/Acylhydrolase family TST_1476 PF02348 Cytidylyltransferase TST_1477 PF01565 FAD binding domain TST_1477 PF02913 FAD linked oxidases, C-terminal domain TST_1481 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase TST_1481 PF13288 DXP reductoisomerase C-terminal domain TST_1481 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain TST_1483 PF00180 Isocitrate/isopropylmalate dehydrogenase TST_1484 PF00694 Aconitase C-terminal domain TST_1485 PF00330 Aconitase family (aconitate hydratase) TST_1486 PF00682 HMGL-like TST_1486 PF08502 LeuA allosteric (dimerisation) domain TST_1487 PF00155 Aminotransferase class I and II TST_1488 PF00290 Tryptophan synthase alpha chain TST_1489 PF00291 Pyridoxal-phosphate dependent enzyme TST_1490 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase TST_1491 PF00218 Indole-3-glycerol phosphate synthase TST_1492 PF00591 Glycosyl transferase family, a/b domain TST_1492 PF02885 Glycosyl transferase family, helical bundle domain TST_1493 PF00117 Glutamine amidotransferase class-I TST_1496 PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system TST_1502 PF00361 Proton-conducting membrane transporter TST_1503 PF00361 Proton-conducting membrane transporter TST_1503 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus TST_1504 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus TST_1504 PF00361 Proton-conducting membrane transporter TST_1505 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TST_1506 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TST_1507 PF12838 4Fe-4S dicluster domain TST_1508 PF00146 NADH dehydrogenase TST_1509 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit TST_1510 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit TST_1511 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit TST_1512 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TST_1514 PF03641 Possible lysine decarboxylase TST_1516 PF01925 Sulfite exporter TauE/SafE TST_1520 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TST_1520 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_1520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster TST_1522 PF07992 Pyridine nucleotide-disulphide oxidoreductase TST_1522 PF00724 NADH:flavin oxidoreductase / NADH oxidase family TST_1525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TST_1525 PF16591 Helical bimodular sensor domain TST_1525 PF00672 HAMP domain TST_1526 PF01888 CbiD TST_1527 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_1527 PF14824 Sirohaem biosynthesis protein central TST_1527 PF10414 Sirohaem synthase dimerisation region TST_1528 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases TST_1529 PF01964 Radical SAM ThiC family TST_1530 PF01972 Serine dehydrogenase proteinase TST_1530 PF01957 NfeD-like C-terminal, partner-binding TST_1531 PF12850 Calcineurin-like phosphoesterase superfamily domain TST_1532 PF00216 Bacterial DNA-binding protein TST_1533 PF01343 Peptidase family S49 TST_1534 PF00575 S1 RNA binding domain TST_1535 PF02401 LytB protein TST_1536 PF00919 Uncharacterized protein family UPF0004 TST_1536 PF04055 Radical SAM superfamily TST_1536 PF18693 TRAM domain TST_1538 PF02844 Phosphoribosylglycinamide synthetase, N domain TST_1538 PF02843 Phosphoribosylglycinamide synthetase, C domain TST_1538 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain TST_1539 PF02272 DHHA1 domain TST_1539 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain TST_1539 PF01411 tRNA synthetases class II (A) TST_1540 PF00437 Type II/IV secretion system protein TST_1541 PF00154 recA bacterial DNA recombination protein TST_1543 PF01370 NAD dependent epimerase/dehydratase family TST_1544 PF01960 ArgJ family TST_1549 PF07685 CobB/CobQ-like glutamine amidotransferase domain TST_1549 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain TST_1550 PF01184 GPR1/FUN34/yaaH family TST_1553 PF00011 Hsp20/alpha crystallin family TST_1554 PF00583 Acetyltransferase (GNAT) family TST_1554 PF13380 CoA binding domain TST_1554 PF13607 Succinyl-CoA ligase like flavodoxin domain TST_1555 PF00391 PEP-utilising enzyme, mobile domain TST_1555 PF02896 PEP-utilising enzyme, TIM barrel domain TST_1555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain TST_1558 PF07724 AAA domain (Cdc48 subfamily) TST_1558 PF00004 ATPase family associated with various cellular activities (AAA) TST_1558 PF17871 AAA lid domain TST_1558 PF10431 C-terminal, D2-small domain, of ClpB protein TST_1558 PF02861 Clp amino terminal domain, pathogenicity island component TST_1559 PF00534 Glycosyl transferases group 1 TST_1559 PF08323 Starch synthase catalytic domain TST_1560 PF00343 Carbohydrate phosphorylase TST_1560 PF11897 Protein of unknown function (DUF3417) TST_1561 PF00155 Aminotransferase class I and II TST_1564 PF00474 Sodium:solute symporter family TST_1565 PF01479 S4 domain TST_1565 PF01728 FtsJ-like methyltransferase TST_1566 PF04055 Radical SAM superfamily TST_1566 PF12544 Lysine-2,3-aminomutase TST_1568 PF01435 Peptidase family M48 TST_1570 PF02219 Methylenetetrahydrofolate reductase TST_1571 PF00155 Aminotransferase class I and II TST_1572 PF02654 Cobalamin-5-phosphate synthase TST_1573 PF13419 Haloacid dehalogenase-like hydrolase TST_1574 PF03266 NTPase TST_1576 PF00669 Bacterial flagellin N-terminal helical region TST_1576 PF00700 Bacterial flagellin C-terminal helical region TST_1579 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III TST_1579 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal TST_1580 PF01039 Carboxyl transferase domain TST_1581 PF00378 Enoyl-CoA hydratase/isomerase TST_1582 PF00364 Biotin-requiring enzyme TST_1583 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TST_1583 PF02785 Biotin carboxylase C-terminal domain TST_1583 PF00289 Biotin carboxylase, N-terminal domain TST_1585 PF00563 EAL domain TST_1585 PF03707 Bacterial signalling protein N terminal repeat TST_1585 PF00990 Diguanylate cyclase, GGDEF domain TST_1587 PF07885 Ion channel TST_1587 PF02254 TrkA-N domain TST_1592 PF01169 Uncharacterized protein family UPF0016 TST_1598 PF02082 Transcriptional regulator TST_1599 PF00291 Pyridoxal-phosphate dependent enzyme TST_1601 PF12838 4Fe-4S dicluster domain TST_1601 PF11953 Domain of unknown function (DUF3470) TST_1602 PF02445 Quinolinate synthetase A protein TST_1603 PF00899 ThiF family TST_1605 PF01171 PP-loop family TST_1612 PF01451 Low molecular weight phosphotyrosine protein phosphatase TST_1613 PF01758 Sodium Bile acid symporter family TST_1615 PF00872 Transposase, Mutator family TST_1617 PF03030 Inorganic H+ pyrophosphatase TST_1618 PF01195 Peptidyl-tRNA hydrolase TST_1619 PF01386 Ribosomal L25p family TST_1619 PF14693 Ribosomal protein TL5, C-terminal domain TST_1620 PF14572 Phosphoribosyl synthetase-associated domain TST_1620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase TST_1621 PF01165 Ribosomal protein S21 TST_1623 PF01926 50S ribosome-binding GTPase TST_1623 PF13167 GTP-binding GTPase N-terminal TST_1623 PF16360 GTP-binding GTPase Middle Region TST_1626 PF00117 Glutamine amidotransferase class-I TST_1626 PF02540 NAD synthase TST_1626 PF00958 GMP synthase C terminal domain TST_1627 PF00543 Nitrogen regulatory protein P-II TST_1630 PF00482 Type II secretion system (T2SS), protein F TST_1631 PF00437 Type II/IV secretion system protein TST_1632 PF03958 Bacterial type II/III secretion system short domain TST_1632 PF00263 Bacterial type II and III secretion system protein TST_1633 PF13180 PDZ domain TST_1633 PF17820 PDZ domain TST_1635 PF00072 Response regulator receiver domain TST_1636 PF01979 Amidohydrolase family TST_1637 PF03462 PCRF domain TST_1637 PF00472 RF-1 domain TST_1638 PF00318 Ribosomal protein S2 TST_1639 PF00889 Elongation factor TS TST_1640 PF00696 Amino acid kinase family TST_1641 PF01765 Ribosome recycling factor TST_1642 PF00037 4Fe-4S binding domain TST_1643 PF01255 Putative undecaprenyl diphosphate synthase TST_1644 PF12704 MacB-like periplasmic core domain TST_1644 PF02687 FtsX-like permease family TST_1645 PF01336 OB-fold nucleic acid binding domain TST_1645 PF00152 tRNA synthetases class II (D, K and N) TST_1646 PF03966 Trm112p-like protein TST_1647 PF04972 BON domain TST_1647 PF01476 LysM domain TST_1649 PF03129 Anticodon binding domain TST_1649 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TST_1649 PF04073 Aminoacyl-tRNA editing domain TST_1650 PF01119 DNA mismatch repair protein, C-terminal domain TST_1650 PF08676 MutL C terminal dimerisation domain TST_1651 PF00005 ABC transporter TST_1652 PF12399 Branched-chain amino acid ATP-binding cassette transporter TST_1652 PF00005 ABC transporter TST_1654 PF02653 Branched-chain amino acid transport system / permease component TST_1656 PF08543 Phosphomethylpyrimidine kinase TST_1658 PF02374 Anion-transporting ATPase TST_1658 PF17886 HSP20-like domain found in ArsA TST_1660 PF13722 5TM C-terminal transporter carbon starvation CstA TST_1660 PF02554 Carbon starvation protein CstA TST_1661 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family TST_1662 PF01075 Glycosyltransferase family 9 (heptosyltransferase) TST_1663 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain TST_1663 PF00289 Biotin carboxylase, N-terminal domain TST_1663 PF02785 Biotin carboxylase C-terminal domain TST_1664 PF00364 Biotin-requiring enzyme TST_1665 PF08207 Elongation factor P (EF-P) KOW-like domain TST_1665 PF09285 Elongation factor P, C-terminal TST_1665 PF01132 Elongation factor P (EF-P) OB domain TST_1666 PF01084 Ribosomal protein S18 TST_1667 PF00436 Single-strand binding protein family TST_1668 PF01250 Ribosomal protein S6 TST_1670 PF07977 FabA-like domain TST_1671 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD TST_1671 PF14602 Hexapeptide repeat of succinyl-transferase TST_1671 PF00132 Bacterial transferase hexapeptide (six repeats) TST_1673 PF01103 Surface antigen TST_1673 PF07244 Surface antigen variable number repeat TST_1674 PF17871 AAA lid domain TST_1674 PF00004 ATPase family associated with various cellular activities (AAA) TST_1674 PF10431 C-terminal, D2-small domain, of ClpB protein TST_1674 PF07724 AAA domain (Cdc48 subfamily) TST_1674 PF02861 Clp amino terminal domain, pathogenicity island component TST_1675 PF01979 Amidohydrolase family TST_1676 PF05193 Peptidase M16 inactive domain TST_1677 PF05193 Peptidase M16 inactive domain TST_1677 PF00675 Insulinase (Peptidase family M16) TST_1678 PF01479 S4 domain TST_1678 PF00849 RNA pseudouridylate synthase TST_1681 PF00596 Class II Aldolase and Adducin N-terminal domain TST_1685 PF00691 OmpA family TST_1686 PF04052 TolB amino-terminal domain TST_1686 PF07676 WD40-like Beta Propeller Repeat TST_1688 PF02472 Biopolymer transport protein ExbD/TolR TST_1689 PF01618 MotA/TolQ/ExbB proton channel family TST_1690 PF02774 Semialdehyde dehydrogenase, dimerisation domain TST_1690 PF01118 Semialdehyde dehydrogenase, NAD binding domain TST_1692 PF01142 tRNA pseudouridine synthase D (TruD) TST_1693 PF00795 Carbon-nitrogen hydrolase TST_1694 PF00977 Histidine biosynthesis protein TST_1695 PF00977 Histidine biosynthesis protein TST_1698 PF00072 Response regulator receiver domain TST_1698 PF00196 Bacterial regulatory proteins, luxR family TST_1700 PF00072 Response regulator receiver domain TST_1700 PF00196 Bacterial regulatory proteins, luxR family TST_1702 PF02811 PHP domain TST_1702 PF14579 Helix-hairpin-helix motif TST_1702 PF17657 Bacterial DNA polymerase III alpha subunit finger domain TST_1702 PF07733 Bacterial DNA polymerase III alpha NTPase domain TST_1703 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TST_1704 PF00152 tRNA synthetases class II (D, K and N) TST_1705 PF01258 Prokaryotic dksA/traR C4-type zinc finger TST_1706 PF00132 Bacterial transferase hexapeptide (six repeats) TST_1710 PF04055 Radical SAM superfamily TST_1710 PF01018 GTP1/OBG TST_1710 PF01926 50S ribosome-binding GTPase TST_1711 PF03060 Nitronate monooxygenase TST_1714 PF00117 Glutamine amidotransferase class-I TST_1715 PF00475 Imidazoleglycerol-phosphate dehydratase TST_1717 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase TST_1719 PF02779 Transketolase, pyrimidine binding domain TST_1719 PF13292 1-deoxy-D-xylulose-5-phosphate synthase TST_1719 PF02780 Transketolase, C-terminal domain TST_1720 PF00348 Polyprenyl synthetase TST_1722 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase TST_1722 PF01502 Phosphoribosyl-AMP cyclohydrolase TST_1723 PF01938 TRAM domain TST_1723 PF00919 Uncharacterized protein family UPF0004 TST_1723 PF04055 Radical SAM superfamily TST_1727 PF03548 Outer membrane lipoprotein carrier protein LolA TST_1728 PF03796 DnaB-like helicase C terminal domain TST_1728 PF00772 DnaB-like helicase N terminal domain TST_1729 PF01281 Ribosomal protein L9, N-terminal domain TST_1729 PF03948 Ribosomal protein L9, C-terminal domain TST_1730 PF00672 HAMP domain TST_1730 PF17200 Single Cache domain 2 TST_1730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain TST_1731 PF00543 Nitrogen regulatory protein P-II TST_1732 PF02589 LUD domain TST_1733 PF11870 Domain of unknown function (DUF3390) TST_1733 PF13183 4Fe-4S dicluster domain TST_1733 PF02589 LUD domain TST_1734 PF03109 ABC1 family TST_1735 PF00563 EAL domain TST_1735 PF00990 Diguanylate cyclase, GGDEF domain TST_1735 PF03707 Bacterial signalling protein N terminal repeat TST_1737 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family TST_1738 PF00809 Pterin binding enzyme TST_1738 PF02607 B12 binding domain TST_1738 PF02965 Vitamin B12 dependent methionine synthase, activation domain TST_1738 PF02574 Homocysteine S-methyltransferase TST_1738 PF02310 B12 binding domain TST_1739 PF14821 Threonine synthase N terminus TST_1739 PF00291 Pyridoxal-phosphate dependent enzyme TST_1741 PF00483 Nucleotidyl transferase TST_1741 PF01050 Mannose-6-phosphate isomerase TST_1743 PF02464 Competence-damaged protein TST_1743 PF00994 Probable molybdopterin binding domain TST_1743 PF18146 Damage-inducible protein CinA KH domain TST_1744 PF01784 NIF3 (NGG1p interacting factor 3) TST_1746 PF00300 Histidine phosphatase superfamily (branch 1) TST_1746 PF13456 Reverse transcriptase-like TST_1747 PF00750 tRNA synthetases class I (R) TST_1747 PF05746 DALR anticodon binding domain TST_1747 PF03485 Arginyl tRNA synthetase N terminal domain TST_1750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain TST_1750 PF02770 Acyl-CoA dehydrogenase, middle domain TST_1750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain TST_1751 PF01634 ATP phosphoribosyltransferase TST_1752 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) TST_1753 PF13847 Methyltransferase domain TST_1753 PF17827 PrmC N-terminal domain TST_1754 PF00155 Aminotransferase class I and II TST_1755 PF00742 Homoserine dehydrogenase TST_1755 PF03447 Homoserine dehydrogenase, NAD binding domain TST_1755 PF01842 ACT domain TST_1756 PF00005 ABC transporter TST_1757 PF02405 Permease MlaE TST_1758 PF00842 Alanine racemase, C-terminal domain TST_1758 PF01168 Alanine racemase, N-terminal domain TST_1760 PF13533 Biotin-lipoyl like TST_1761 PF00873 AcrB/AcrD/AcrF family TST_1763 PF00288 GHMP kinases N terminal domain TST_1763 PF08544 GHMP kinases C terminal TST_1765 PF13344 Haloacid dehalogenase-like hydrolase TST_1768 PF01230 HIT domain TST_1771 PF03167 Uracil DNA glycosylase superfamily TST_1773 PF01189 16S rRNA methyltransferase RsmB/F TST_1773 PF01029 NusB family TST_1774 PF00834 Ribulose-phosphate 3 epimerase family TST_1776 PF09335 SNARE associated Golgi protein TST_1777 PF01557 Fumarylacetoacetate (FAA) hydrolase family TST_1778 PF01578 Cytochrome C assembly protein TST_1779 PF01488 Shikimate / quinate 5-dehydrogenase TST_1779 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain TST_1779 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain TST_1780 PF03900 Porphobilinogen deaminase, C-terminal domain TST_1780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain TST_1781 PF01256 Carbohydrate kinase TST_1781 PF03853 YjeF-related protein N-terminus TST_1782 PF00696 Amino acid kinase family TST_1783 PF02223 Thymidylate kinase TST_1784 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)