locus-tag class description JW907_00005 PF11638 DnaA N-terminal domain JW907_00005 PF00308 Bacterial dnaA protein JW907_00005 PF08299 Bacterial dnaA protein helix-turn-helix JW907_00010 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JW907_00025 PF12849 PBP superfamily domain JW907_00035 PF00483 Nucleotidyl transferase JW907_00040 PF03773 Predicted permease JW907_00045 PF04055 Radical SAM superfamily JW907_00045 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JW907_00050 PF00210 Ferritin-like domain JW907_00065 PF07995 Glucose / Sorbosone dehydrogenase JW907_00075 PF04545 Sigma-70, region 4 JW907_00075 PF04539 Sigma-70 region 3 JW907_00075 PF04542 Sigma-70 region 2 JW907_00075 PF00140 Sigma-70 factor, region 1.2 JW907_00085 PF12849 PBP superfamily domain JW907_00090 PF12849 PBP superfamily domain JW907_00095 PF00528 Binding-protein-dependent transport system inner membrane component JW907_00100 PF00528 Binding-protein-dependent transport system inner membrane component JW907_00105 PF00005 ABC transporter JW907_00110 PF01425 Amidase JW907_00120 PF10396 GTP-binding protein TrmE N-terminus JW907_00120 PF12631 MnmE helical domain JW907_00120 PF01926 50S ribosome-binding GTPase JW907_00140 PF00111 2Fe-2S iron-sulfur cluster binding domain JW907_00160 PF12838 4Fe-4S dicluster domain JW907_00170 PF00535 Glycosyl transferase family 2 JW907_00175 PF01501 Glycosyl transferase family 8 JW907_00175 PF00535 Glycosyl transferase family 2 JW907_00190 PF02069 Prokaryotic metallothionein JW907_00195 PF01022 Bacterial regulatory protein, arsR family JW907_00215 PF01230 HIT domain JW907_00220 PF04551 GcpE protein JW907_00235 PF00990 Diguanylate cyclase, GGDEF domain JW907_00235 PF05230 MASE2 domain JW907_00245 PF00206 Lyase JW907_00245 PF14698 Argininosuccinate lyase C-terminal JW907_00250 PF01126 Heme oxygenase JW907_00270 PF18152 DAHP synthase ferredoxin-like domain JW907_00270 PF00793 DAHP synthetase I family JW907_00285 PF00085 Thioredoxin JW907_00310 PF14251 Domain of unknown function (DUF4346) JW907_00320 PF08148 DSHCT (NUC185) domain JW907_00320 PF00271 Helicase conserved C-terminal domain JW907_00320 PF00270 DEAD/DEAH box helicase JW907_00325 PF01627 Hpt domain JW907_00325 PF02895 Signal transducing histidine kinase, homodimeric domain JW907_00325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_00325 PF00072 Response regulator receiver domain JW907_00325 PF01584 CheW-like domain JW907_00330 PF02895 Signal transducing histidine kinase, homodimeric domain JW907_00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_00330 PF01627 Hpt domain JW907_00330 PF07194 P2 response regulator binding domain JW907_00330 PF01584 CheW-like domain JW907_00335 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JW907_00335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW907_00345 PF00072 Response regulator receiver domain JW907_00350 PF00072 Response regulator receiver domain JW907_00360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JW907_00375 PF12697 Alpha/beta hydrolase family JW907_00385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JW907_00385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JW907_00395 PF01593 Flavin containing amine oxidoreductase JW907_00405 PF01384 Phosphate transporter family JW907_00410 PF01964 Radical SAM ThiC family JW907_00415 PF03330 Lytic transglycolase JW907_00425 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JW907_00425 PF01243 Pyridoxamine 5'-phosphate oxidase JW907_00430 PF00699 Urease beta subunit JW907_00440 PF00005 ABC transporter JW907_00445 PF13439 Glycosyltransferase Family 4 JW907_00445 PF00534 Glycosyl transferases group 1 JW907_00455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JW907_00455 PF01842 ACT domain JW907_00455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JW907_00460 PF00226 DnaJ domain JW907_00460 PF00684 DnaJ central domain JW907_00460 PF01556 DnaJ C terminal domain JW907_00495 PF04107 Glutamate-cysteine ligase family 2(GCS2) JW907_00500 PF02684 Lipid-A-disaccharide synthetase JW907_00515 PF04542 Sigma-70 region 2 JW907_00515 PF08281 Sigma-70, region 4 JW907_00520 PF01618 MotA/TolQ/ExbB proton channel family JW907_00530 PF00535 Glycosyl transferase family 2 JW907_00530 PF13181 Tetratricopeptide repeat JW907_00540 PF00580 UvrD/REP helicase N-terminal domain JW907_00540 PF13361 UvrD-like helicase C-terminal domain JW907_00550 PF13419 Haloacid dehalogenase-like hydrolase JW907_00555 PF00004 ATPase family associated with various cellular activities (AAA) JW907_00555 PF07724 AAA domain (Cdc48 subfamily) JW907_00555 PF17871 AAA lid domain JW907_00555 PF02861 Clp amino terminal domain, pathogenicity island component JW907_00555 PF10431 C-terminal, D2-small domain, of ClpB protein JW907_00570 PF00679 Elongation factor G C-terminus JW907_00570 PF00009 Elongation factor Tu GTP binding domain JW907_00570 PF03144 Elongation factor Tu domain 2 JW907_00570 PF06421 GTP-binding protein LepA C-terminus JW907_00580 PF02386 Cation transport protein JW907_00585 PF00180 Isocitrate/isopropylmalate dehydrogenase JW907_00590 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) JW907_00600 PF00075 RNase H JW907_00605 PF00542 Ribosomal protein L7/L12 C-terminal domain JW907_00605 PF16320 Ribosomal protein L7/L12 dimerisation domain JW907_00610 PF00466 Ribosomal protein L10 JW907_00615 PF00687 Ribosomal protein L1p/L10e family JW907_00620 PF03946 Ribosomal protein L11, N-terminal domain JW907_00620 PF00298 Ribosomal protein L11, RNA binding domain JW907_00625 PF02357 Transcription termination factor nusG JW907_00625 PF00467 KOW motif JW907_00670 PF08666 SAF domain JW907_00670 PF03102 NeuB family JW907_00680 PF02348 Cytidylyltransferase JW907_00690 PF00850 Histone deacetylase domain JW907_00705 PF00850 Histone deacetylase domain JW907_00710 PF00534 Glycosyl transferases group 1 JW907_00710 PF13439 Glycosyltransferase Family 4 JW907_00720 PF02719 Polysaccharide biosynthesis protein JW907_00725 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JW907_00730 PF01435 Peptidase family M48 JW907_00730 PF13181 Tetratricopeptide repeat JW907_00735 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JW907_00745 PF00421 Photosystem II protein JW907_00750 PF00124 Photosynthetic reaction centre protein JW907_00760 PF02033 Ribosome-binding factor A JW907_00765 PF01925 Sulfite exporter TauE/SafE JW907_00770 PF11127 Protein of unknown function (DUF2892) JW907_00770 PF00581 Rhodanese-like domain JW907_00775 PF00753 Metallo-beta-lactamase superfamily JW907_00780 PF02913 FAD linked oxidases, C-terminal domain JW907_00780 PF01565 FAD binding domain JW907_00785 PF07683 Cobalamin synthesis protein cobW C-terminal domain JW907_00785 PF02492 CobW/HypB/UreG, nucleotide-binding domain JW907_00790 PF07885 Ion channel JW907_00790 PF02254 TrkA-N domain JW907_00800 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JW907_00800 PF01266 FAD dependent oxidoreductase JW907_00810 PF00707 Translation initiation factor IF-3, C-terminal domain JW907_00810 PF05198 Translation initiation factor IF-3, N-terminal domain JW907_00815 PF00529 HlyD membrane-fusion protein of T1SS JW907_00815 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JW907_00820 PF00873 AcrB/AcrD/AcrF family JW907_00825 PF03989 DNA gyrase C-terminal domain, beta-propeller JW907_00825 PF00521 DNA gyrase/topoisomerase IV, subunit A JW907_00830 PF09179 TilS substrate binding domain JW907_00830 PF01171 PP-loop family JW907_00835 PF01578 Cytochrome C assembly protein JW907_00845 PF00271 Helicase conserved C-terminal domain JW907_00845 PF00176 SNF2 family N-terminal domain JW907_00845 PF12419 SNF2 Helicase protein JW907_00850 PF08448 PAS fold JW907_00850 PF08447 PAS fold JW907_00850 PF00563 EAL domain JW907_00850 PF00990 Diguanylate cyclase, GGDEF domain JW907_00855 PF01746 tRNA (Guanine-1)-methyltransferase JW907_00870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW907_00870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW907_00875 PF00595 PDZ domain JW907_00875 PF03572 Peptidase family S41 JW907_00880 PF01509 TruB family pseudouridylate synthase (N terminal domain) JW907_00890 PF08241 Methyltransferase domain JW907_00895 PF02347 Glycine cleavage system P-protein JW907_00900 PF01654 Cytochrome bd terminal oxidase subunit I JW907_00905 PF02322 Cytochrome bd terminal oxidase subunit II JW907_00920 PF12849 PBP superfamily domain JW907_00940 PF01043 SecA preprotein cross-linking domain JW907_00940 PF07517 SecA DEAD-like domain JW907_00940 PF07516 SecA Wing and Scaffold domain JW907_00950 PF04225 Opacity-associated protein A LysM-like domain JW907_00950 PF01551 Peptidase family M23 JW907_00955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JW907_00955 PF07685 CobB/CobQ-like glutamine amidotransferase domain JW907_00965 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus JW907_00965 PF04422 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term JW907_00970 PF00124 Photosynthetic reaction centre protein JW907_00975 PF00124 Photosynthetic reaction centre protein JW907_00980 PF02374 Anion-transporting ATPase JW907_00980 PF17886 HSP20-like domain found in ArsA JW907_00985 PF00005 ABC transporter JW907_00995 PF02843 Phosphoribosylglycinamide synthetase, C domain JW907_00995 PF02844 Phosphoribosylglycinamide synthetase, N domain JW907_00995 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JW907_01035 PF01555 DNA methylase JW907_01040 PF03699 Uncharacterised protein family (UPF0182) JW907_01045 PF00578 AhpC/TSA family JW907_01050 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JW907_01050 PF13181 Tetratricopeptide repeat JW907_01060 PF00528 Binding-protein-dependent transport system inner membrane component JW907_01065 PF00578 AhpC/TSA family JW907_01085 PF01888 CbiD JW907_01095 PF00391 PEP-utilising enzyme, mobile domain JW907_01095 PF02896 PEP-utilising enzyme, TIM barrel domain JW907_01095 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JW907_01100 PF00171 Aldehyde dehydrogenase family JW907_01105 PF08323 Starch synthase catalytic domain JW907_01105 PF00534 Glycosyl transferases group 1 JW907_01115 PF01628 HrcA protein C terminal domain JW907_01115 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JW907_01120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JW907_01120 PF00117 Glutamine amidotransferase class-I JW907_01125 PF00528 Binding-protein-dependent transport system inner membrane component JW907_01130 PF01556 DnaJ C terminal domain JW907_01130 PF00226 DnaJ domain JW907_01160 PF08264 Anticodon-binding domain of tRNA JW907_01160 PF09334 tRNA synthetases class I (M) JW907_01170 PF03040 CemA family JW907_01175 PF00376 MerR family regulatory protein JW907_01175 PF09278 MerR, DNA binding JW907_01185 PF01699 Sodium/calcium exchanger protein JW907_01190 PF02152 Dihydroneopterin aldolase JW907_01195 PF03190 Protein of unknown function, DUF255 JW907_01200 PF01571 Aminomethyltransferase folate-binding domain JW907_01200 PF08669 Glycine cleavage T-protein C-terminal barrel domain JW907_01220 PF01208 Uroporphyrinogen decarboxylase (URO-D) JW907_01245 PF04542 Sigma-70 region 2 JW907_01245 PF04545 Sigma-70, region 4 JW907_01245 PF04539 Sigma-70 region 3 JW907_01250 PF02673 Bacitracin resistance protein BacA JW907_01260 PF17191 RecG wedge domain JW907_01260 PF00271 Helicase conserved C-terminal domain JW907_01260 PF00270 DEAD/DEAH box helicase JW907_01265 PF06480 FtsH Extracellular JW907_01265 PF01434 Peptidase family M41 JW907_01265 PF17862 AAA+ lid domain JW907_01265 PF00004 ATPase family associated with various cellular activities (AAA) JW907_01270 PF01227 GTP cyclohydrolase I JW907_01280 PF05552 Conserved TM helix JW907_01285 PF00223 Photosystem I psaA/psaB protein JW907_01290 PF00223 Photosystem I psaA/psaB protein JW907_01295 PF01042 Endoribonuclease L-PSP JW907_01310 PF01061 ABC-2 type transporter JW907_01310 PF00005 ABC transporter JW907_01310 PF00498 FHA domain JW907_01315 PF00072 Response regulator receiver domain JW907_01315 PF00196 Bacterial regulatory proteins, luxR family JW907_01320 PF02575 YbaB/EbfC DNA-binding family JW907_01330 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JW907_01330 PF00361 Proton-conducting membrane transporter JW907_01330 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JW907_01335 PF00361 Proton-conducting membrane transporter JW907_01340 PF12146 Serine aminopeptidase, S33 JW907_01345 PF00342 Phosphoglucose isomerase JW907_01355 PF12627 Probable RNA and SrmB- binding site of polymerase A JW907_01355 PF01743 Poly A polymerase head domain JW907_01355 PF13735 tRNA nucleotidyltransferase domain 2 putative JW907_01370 PF00764 Arginosuccinate synthase JW907_01375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JW907_01375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JW907_01380 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JW907_01390 PF02446 4-alpha-glucanotransferase JW907_01400 PF10716 NADH dehydrogenase transmembrane subunit JW907_01405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JW907_01410 PF01112 Asparaginase JW907_01420 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JW907_01425 PF00218 Indole-3-glycerol phosphate synthase JW907_01430 PF13419 Haloacid dehalogenase-like hydrolase JW907_01435 PF02233 NAD(P) transhydrogenase beta subunit JW907_01440 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JW907_01445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JW907_01445 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JW907_01455 PF00582 Universal stress protein family JW907_01465 PF00005 ABC transporter JW907_01465 PF00664 ABC transporter transmembrane region JW907_01470 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JW907_01470 PF01676 Metalloenzyme superfamily JW907_01475 PF01494 FAD binding domain JW907_01485 PF03462 PCRF domain JW907_01485 PF00472 RF-1 domain JW907_01490 PF00163 Ribosomal protein S4/S9 N-terminal domain JW907_01490 PF01479 S4 domain JW907_01495 PF01609 Transposase DDE domain JW907_01495 PF13808 DDE_Tnp_1-associated JW907_01505 PF10017 Histidine-specific methyltransferase, SAM-dependent JW907_01510 PF00574 Clp protease JW907_01520 PF16166 Chloroplast import apparatus Tic20-like JW907_01525 PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) JW907_01535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JW907_01540 PF14815 NUDIX domain JW907_01540 PF00730 HhH-GPD superfamily base excision DNA repair protein JW907_01540 PF00633 Helix-hairpin-helix motif JW907_01550 PF01791 DeoC/LacD family aldolase JW907_01565 PF00570 HRDC domain JW907_01565 PF01612 3'-5' exonuclease JW907_01585 PF02617 ATP-dependent Clp protease adaptor protein ClpS JW907_01590 PF01613 Flavin reductase like domain JW907_01590 PF00753 Metallo-beta-lactamase superfamily JW907_01605 PF10726 Protein of function (DUF2518) JW907_01635 PF08239 Bacterial SH3 domain JW907_01635 PF00069 Protein kinase domain JW907_01655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JW907_01660 PF06745 KaiC JW907_01660 PF18073 Rubredoxin metal binding domain JW907_01670 PF00528 Binding-protein-dependent transport system inner membrane component JW907_01670 PF12911 N-terminal TM domain of oligopeptide transport permease C JW907_01675 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JW907_01675 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JW907_01680 PF02660 Glycerol-3-phosphate acyltransferase JW907_01700 PF03099 Biotin/lipoate A/B protein ligase family JW907_01700 PF02237 Biotin protein ligase C terminal domain JW907_01730 PF00109 Beta-ketoacyl synthase, N-terminal domain JW907_01730 PF02801 Beta-ketoacyl synthase, C-terminal domain JW907_01735 PF02779 Transketolase, pyrimidine binding domain JW907_01735 PF02780 Transketolase, C-terminal domain JW907_01735 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JW907_01750 PF02397 Bacterial sugar transferase JW907_01755 PF00498 FHA domain JW907_01755 PF00563 EAL domain JW907_01755 PF00990 Diguanylate cyclase, GGDEF domain JW907_01760 PF05193 Peptidase M16 inactive domain JW907_01760 PF00675 Insulinase (Peptidase family M16) JW907_01770 PF00497 Bacterial extracellular solute-binding proteins, family 3 JW907_01775 PF04760 Translation initiation factor IF-2, N-terminal region JW907_01775 PF11987 Translation-initiation factor 2 JW907_01775 PF00009 Elongation factor Tu GTP binding domain JW907_01780 PF01782 RimM N-terminal domain JW907_01780 PF05239 PRC-barrel domain JW907_01800 PF01008 Initiation factor 2 subunit family JW907_01820 PF00920 Dehydratase family JW907_01825 PF02571 Precorrin-6x reductase CbiJ/CobK JW907_01835 PF00248 Aldo/keto reductase family JW907_01850 PF00210 Ferritin-like domain JW907_01860 PF07664 Ferrous iron transport protein B C terminus JW907_01860 PF02421 Ferrous iron transport protein B JW907_01860 PF07670 Nucleoside recognition JW907_01875 PF11780 Protein of unknown function (DUF3318) JW907_01885 PF00421 Photosystem II protein JW907_01890 PF00486 Transcriptional regulatory protein, C terminal JW907_01890 PF01627 Hpt domain JW907_01890 PF00072 Response regulator receiver domain JW907_01895 PF00072 Response regulator receiver domain JW907_01895 PF00486 Transcriptional regulatory protein, C terminal JW907_01900 PF00862 Sucrose synthase JW907_01900 PF00534 Glycosyl transferases group 1 JW907_01910 PF08241 Methyltransferase domain JW907_01910 PF12697 Alpha/beta hydrolase family JW907_01915 PF14306 PUA-like domain JW907_01915 PF01747 ATP-sulfurylase JW907_01925 PF00933 Glycosyl hydrolase family 3 N terminal domain JW907_01925 PF01915 Glycosyl hydrolase family 3 C-terminal domain JW907_01935 PF08032 RNA 2'-O ribose methyltransferase substrate binding JW907_01935 PF00588 SpoU rRNA Methylase family JW907_01940 PF02401 LytB protein JW907_01945 PF13288 DXP reductoisomerase C-terminal domain JW907_01945 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JW907_01945 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JW907_01960 PF01168 Alanine racemase, N-terminal domain JW907_01975 PF01370 NAD dependent epimerase/dehydratase family JW907_01980 PF16363 GDP-mannose 4,6 dehydratase JW907_02010 PF01435 Peptidase family M48 JW907_02015 PF04998 RNA polymerase Rpb1, domain 5 JW907_02015 PF04983 RNA polymerase Rpb1, domain 3 JW907_02015 PF05000 RNA polymerase Rpb1, domain 4 JW907_02020 PF04997 RNA polymerase Rpb1, domain 1 JW907_02020 PF04983 RNA polymerase Rpb1, domain 3 JW907_02020 PF00623 RNA polymerase Rpb1, domain 2 JW907_02025 PF04565 RNA polymerase Rpb2, domain 3 JW907_02025 PF04563 RNA polymerase beta subunit JW907_02025 PF04560 RNA polymerase Rpb2, domain 7 JW907_02025 PF04561 RNA polymerase Rpb2, domain 2 JW907_02025 PF10385 RNA polymerase beta subunit external 1 domain JW907_02025 PF00562 RNA polymerase Rpb2, domain 6 JW907_02035 PF00005 ABC transporter JW907_02035 PF02687 FtsX-like permease family JW907_02035 PF12704 MacB-like periplasmic core domain JW907_02045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JW907_02045 PF00529 HlyD membrane-fusion protein of T1SS JW907_02050 PF00849 RNA pseudouridylate synthase JW907_02060 PF01751 Toprim domain JW907_02060 PF00986 DNA gyrase B subunit, carboxyl terminus JW907_02060 PF00204 DNA gyrase B JW907_02060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_02070 PF00117 Glutamine amidotransferase class-I JW907_02070 PF00958 GMP synthase C terminal domain JW907_02085 PF00773 RNB domain JW907_02100 PF00664 ABC transporter transmembrane region JW907_02100 PF00005 ABC transporter JW907_02110 PF00849 RNA pseudouridylate synthase JW907_02110 PF01479 S4 domain JW907_02115 PF00403 Heavy-metal-associated domain JW907_02120 PF03952 Enolase, N-terminal domain JW907_02120 PF00113 Enolase, C-terminal TIM barrel domain JW907_02125 PF00398 Ribosomal RNA adenine dimethylase JW907_02135 PF06968 Biotin and Thiamin Synthesis associated domain JW907_02135 PF04055 Radical SAM superfamily JW907_02140 PF03483 B3/4 domain JW907_02140 PF03484 tRNA synthetase B5 domain JW907_02140 PF03147 Ferredoxin-fold anticodon binding domain JW907_02140 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JW907_02140 PF01588 Putative tRNA binding domain JW907_02150 PF01351 Ribonuclease HII JW907_02155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JW907_02155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JW907_02155 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JW907_02160 PF01370 NAD dependent epimerase/dehydratase family JW907_02165 PF01979 Amidohydrolase family JW907_02170 PF00146 NADH dehydrogenase JW907_02175 PF12838 4Fe-4S dicluster domain JW907_02180 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JW907_02185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JW907_02190 PF13180 PDZ domain JW907_02195 PF11805 Protein of unknown function (DUF3326) JW907_02210 PF01507 Phosphoadenosine phosphosulfate reductase family JW907_02215 PF02091 Glycyl-tRNA synthetase alpha subunit JW907_02220 PF01522 Polysaccharide deacetylase JW907_02220 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain JW907_02230 PF02441 Flavoprotein JW907_02240 PF13460 NAD(P)H-binding JW907_02250 PF02607 B12 binding domain JW907_02250 PF02310 B12 binding domain JW907_02250 PF02965 Vitamin B12 dependent methionine synthase, activation domain JW907_02250 PF02574 Homocysteine S-methyltransferase JW907_02250 PF00809 Pterin binding enzyme JW907_02260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JW907_02285 PF04055 Radical SAM superfamily JW907_02295 PF00072 Response regulator receiver domain JW907_02295 PF00486 Transcriptional regulatory protein, C terminal JW907_02305 PF00149 Calcineurin-like phosphoesterase JW907_02310 PF01252 Signal peptidase (SPase) II JW907_02315 PF01883 Iron-sulfur cluster assembly protein JW907_02315 PF10609 NUBPL iron-transfer P-loop NTPase JW907_02325 PF02540 NAD synthase JW907_02325 PF00958 GMP synthase C terminal domain JW907_02325 PF00117 Glutamine amidotransferase class-I JW907_02335 PF06150 ChaB JW907_02340 PF00772 DnaB-like helicase N terminal domain JW907_02340 PF14528 LAGLIDADG-like domain JW907_02340 PF03796 DnaB-like helicase C terminal domain JW907_02340 PF00772 DnaB-like helicase N terminal domain JW907_02340 PF14528 LAGLIDADG-like domain JW907_02340 PF03796 DnaB-like helicase C terminal domain JW907_02345 PF01281 Ribosomal protein L9, N-terminal domain JW907_02345 PF03948 Ribosomal protein L9, C-terminal domain JW907_02350 PF01701 Photosystem I reaction centre subunit IX / PsaJ JW907_02355 PF02507 Photosystem I reaction centre subunit III JW907_02360 PF00211 Adenylate and Guanylate cyclase catalytic domain JW907_02365 PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) JW907_02370 PF00890 FAD binding domain JW907_02370 PF02910 Fumarate reductase flavoprotein C-term JW907_02390 PF00796 Photosystem I reaction centre subunit VIII JW907_02395 PF02605 Photosystem I reaction centre subunit XI JW907_02400 PF00899 ThiF family JW907_02400 PF00581 Rhodanese-like domain JW907_02415 PF02887 Pyruvate kinase, alpha/beta domain JW907_02415 PF00224 Pyruvate kinase, barrel domain JW907_02425 PF03702 Anhydro-N-acetylmuramic acid kinase JW907_02430 PF01256 Carbohydrate kinase JW907_02430 PF03853 YjeF-related protein N-terminus JW907_02435 PF02637 GatB domain JW907_02435 PF02934 GatB/GatE catalytic domain JW907_02440 PF00285 Citrate synthase, C-terminal domain JW907_02445 PF08369 Proto-chlorophyllide reductase 57 kD subunit JW907_02445 PF00148 Nitrogenase component 1 type Oxidoreductase JW907_02455 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JW907_02455 PF05221 S-adenosyl-L-homocysteine hydrolase JW907_02460 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JW907_02460 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JW907_02470 PF00528 Binding-protein-dependent transport system inner membrane component JW907_02475 PF00005 ABC transporter JW907_02480 PF00005 ABC transporter JW907_02485 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JW907_02485 PF00384 Molybdopterin oxidoreductase JW907_02485 PF01568 Molydopterin dinucleotide binding domain JW907_02500 PF02885 Glycosyl transferase family, helical bundle domain JW907_02500 PF00591 Glycosyl transferase family, a/b domain JW907_02505 PF03466 LysR substrate binding domain JW907_02505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW907_02520 PF01967 MoaC family JW907_02520 PF12804 MobA-like NTP transferase domain JW907_02525 PF04055 Radical SAM superfamily JW907_02525 PF06463 Molybdenum Cofactor Synthesis C JW907_02530 PF03454 MoeA C-terminal region (domain IV) JW907_02530 PF00994 Probable molybdopterin binding domain JW907_02530 PF03453 MoeA N-terminal region (domain I and II) JW907_02535 PF01730 UreF JW907_02540 PF02814 UreE urease accessory protein, N-terminal domain JW907_02540 PF05194 UreE urease accessory protein, C-terminal domain JW907_02545 PF00072 Response regulator receiver domain JW907_02545 PF09308 LuxQ, periplasmic JW907_02545 PF00512 His Kinase A (phospho-acceptor) domain JW907_02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_02550 PF04898 Glutamate synthase central domain JW907_02550 PF00310 Glutamine amidotransferases class-II JW907_02550 PF01645 Conserved region in glutamate synthase JW907_02550 PF01493 GXGXG motif JW907_02555 PF03989 DNA gyrase C-terminal domain, beta-propeller JW907_02555 PF00521 DNA gyrase/topoisomerase IV, subunit A JW907_02560 PF01370 NAD dependent epimerase/dehydratase family JW907_02565 PF17193 MukF C-terminal domain JW907_02565 PF17192 MukF middle domain JW907_02565 PF03882 MukF winged-helix domain JW907_02575 PF00258 Flavodoxin JW907_02575 PF01613 Flavin reductase like domain JW907_02585 PF02086 D12 class N6 adenine-specific DNA methyltransferase JW907_02590 PF02325 YGGT family JW907_02625 PF12399 Branched-chain amino acid ATP-binding cassette transporter JW907_02625 PF00005 ABC transporter JW907_02635 PF00793 DAHP synthetase I family JW907_02640 PF01740 STAS domain JW907_02645 PF02427 Photosystem I reaction centre subunit IV / PsaE JW907_02650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JW907_02650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JW907_02650 PF06827 Zinc finger found in FPG and IleRS JW907_02655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_02655 PF00512 His Kinase A (phospho-acceptor) domain JW907_02660 PF04055 Radical SAM superfamily JW907_02660 PF18693 TRAM domain JW907_02660 PF00919 Uncharacterized protein family UPF0004 JW907_02675 PF01593 Flavin containing amine oxidoreductase JW907_02685 PF00156 Phosphoribosyl transferase domain JW907_02690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JW907_02690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JW907_02695 PF00175 Oxidoreductase NAD-binding domain JW907_02695 PF00970 Oxidoreductase FAD-binding domain JW907_02695 PF00111 2Fe-2S iron-sulfur cluster binding domain JW907_02700 PF03600 Citrate transporter JW907_02705 PF01687 Riboflavin kinase JW907_02705 PF06574 FAD synthetase JW907_02710 PF07726 ATPase family associated with various cellular activities (AAA) JW907_02710 PF17863 AAA lid domain JW907_02720 PF02875 Mur ligase family, glutamate ligase domain JW907_02720 PF08245 Mur ligase middle domain JW907_02720 PF01225 Mur ligase family, catalytic domain JW907_02725 PF02403 Seryl-tRNA synthetase N-terminal domain JW907_02725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW907_02730 PF00502 Phycobilisome protein JW907_02745 PF01808 AICARFT/IMPCHase bienzyme JW907_02745 PF02142 MGS-like domain JW907_02750 PF14572 Phosphoribosyl synthetase-associated domain JW907_02750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JW907_02755 PF00528 Binding-protein-dependent transport system inner membrane component JW907_02760 PF01788 PsbJ JW907_02765 PF02419 PsbL protein JW907_02770 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits JW907_02775 PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits JW907_02775 PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit JW907_02780 PF00069 Protein kinase domain JW907_02780 PF00805 Pentapeptide repeats (8 copies) JW907_02785 PF01040 UbiA prenyltransferase family JW907_02790 PF00849 RNA pseudouridylate synthase JW907_02790 PF01479 S4 domain JW907_02825 PF17761 DUF1016 N-terminal domain JW907_02825 PF06250 YhcG PDDEXK nuclease domain JW907_02830 PF07669 Eco57I restriction-modification methylase JW907_02835 PF02384 N-6 DNA Methylase JW907_02845 PF00498 FHA domain JW907_02850 PF02653 Branched-chain amino acid transport system / permease component JW907_02850 PF11862 Domain of unknown function (DUF3382) JW907_02855 PF12399 Branched-chain amino acid ATP-binding cassette transporter JW907_02855 PF00005 ABC transporter JW907_02870 PF04405 Domain of Unknown function (DUF542) JW907_02870 PF01814 Hemerythrin HHE cation binding domain JW907_02875 PF00115 Cytochrome C and Quinol oxidase polypeptide I JW907_02885 PF08275 DNA primase catalytic core, N-terminal domain JW907_02885 PF10410 DnaB-helicase binding domain of primase JW907_02885 PF01807 CHC2 zinc finger JW907_02890 PF00365 Phosphofructokinase JW907_02895 PF04055 Radical SAM superfamily JW907_02895 PF01938 TRAM domain JW907_02895 PF00919 Uncharacterized protein family UPF0004 JW907_02900 PF01025 GrpE JW907_02910 PF11266 Long-chain fatty aldehyde decarbonylase JW907_02915 PF01488 Shikimate / quinate 5-dehydrogenase JW907_02920 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JW907_02925 PF00106 short chain dehydrogenase JW907_02930 PF01227 GTP cyclohydrolase I JW907_02940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW907_02940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JW907_02955 PF00571 CBS domain JW907_02955 PF02163 Peptidase family M50 JW907_02970 PF01245 Ribosomal protein L19 JW907_02975 PF02545 Maf-like protein JW907_02980 PF00501 AMP-binding enzyme JW907_02990 PF00364 Biotin-requiring enzyme JW907_02990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JW907_02990 PF02817 e3 binding domain JW907_02995 PF00005 ABC transporter JW907_03005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JW907_03005 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JW907_03005 PF00205 Thiamine pyrophosphate enzyme, central domain JW907_03010 PF00364 Biotin-requiring enzyme JW907_03015 PF01132 Elongation factor P (EF-P) OB domain JW907_03015 PF08207 Elongation factor P (EF-P) KOW-like domain JW907_03015 PF09285 Elongation factor P, C-terminal JW907_03020 PF01106 NifU-like domain JW907_03030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JW907_03035 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JW907_03035 PF01926 50S ribosome-binding GTPase JW907_03050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JW907_03055 PF00483 Nucleotidyl transferase JW907_03065 PF14495 Cytochrome c-550 domain JW907_03070 PF14495 Cytochrome c-550 domain JW907_03075 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JW907_03080 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JW907_03080 PF00072 Response regulator receiver domain JW907_03080 PF01627 Hpt domain JW907_03080 PF00672 HAMP domain JW907_03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_03080 PF00512 His Kinase A (phospho-acceptor) domain JW907_03085 PF01048 Phosphorylase superfamily JW907_03095 PF01250 Ribosomal protein S6 JW907_03100 PF01557 Fumarylacetoacetate (FAA) hydrolase family JW907_03110 PF01895 PhoU domain JW907_03130 PF00069 Protein kinase domain JW907_03130 PF00805 Pentapeptide repeats (8 copies) JW907_03135 PF02867 Ribonucleotide reductase, barrel domain JW907_03135 PF17975 Ribonucleotide reductase alpha domain JW907_03140 PF00202 Aminotransferase class-III JW907_03145 PF01061 ABC-2 type transporter JW907_03145 PF00498 FHA domain JW907_03145 PF00005 ABC transporter JW907_03150 PF00072 Response regulator receiver domain JW907_03150 PF00486 Transcriptional regulatory protein, C terminal JW907_03155 PF00155 Aminotransferase class I and II JW907_03185 PF02654 Cobalamin-5-phosphate synthase JW907_03190 PF05193 Peptidase M16 inactive domain JW907_03190 PF00675 Insulinase (Peptidase family M16) JW907_03195 PF01367 5'-3' exonuclease, C-terminal SAM fold JW907_03195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JW907_03195 PF00476 DNA polymerase family A JW907_03195 PF01612 3'-5' exonuclease JW907_03200 PF00005 ABC transporter JW907_03200 PF01061 ABC-2 type transporter JW907_03200 PF00498 FHA domain JW907_03220 PF01502 Phosphoribosyl-AMP cyclohydrolase JW907_03220 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JW907_03225 PF01593 Flavin containing amine oxidoreductase JW907_03230 PF02445 Quinolinate synthetase A protein JW907_03245 PF03099 Biotin/lipoate A/B protein ligase family JW907_03250 PF00465 Iron-containing alcohol dehydrogenase JW907_03250 PF00171 Aldehyde dehydrogenase family JW907_03255 PF04055 Radical SAM superfamily JW907_03265 PF06472 ABC transporter transmembrane region 2 JW907_03265 PF00005 ABC transporter JW907_03270 PF00171 Aldehyde dehydrogenase family JW907_03275 PF02469 Fasciclin domain JW907_03285 PF14489 QueF-like protein JW907_03295 PF01556 DnaJ C terminal domain JW907_03295 PF00684 DnaJ central domain JW907_03295 PF00226 DnaJ domain JW907_03300 PF13393 Histidyl-tRNA synthetase JW907_03305 PF01634 ATP phosphoribosyltransferase JW907_03310 PF03437 BtpA family JW907_03315 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JW907_03320 PF14437 MafB19-like deaminase JW907_03325 PF02533 Photosystem II 4 kDa reaction centre component JW907_03330 PF01709 Transcriptional regulator JW907_03335 PF17768 RecJ OB domain JW907_03335 PF02272 DHHA1 domain JW907_03335 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JW907_03335 PF01368 DHH family JW907_03345 PF13378 Enolase C-terminal domain-like JW907_03350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JW907_03350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JW907_03355 PF01467 Cytidylyltransferase-like JW907_03365 PF00795 Carbon-nitrogen hydrolase JW907_03365 PF02540 NAD synthase JW907_03370 PF13181 Tetratricopeptide repeat JW907_03370 PF00535 Glycosyl transferase family 2 JW907_03375 PF01565 FAD binding domain JW907_03375 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JW907_03380 PF01225 Mur ligase family, catalytic domain JW907_03380 PF08245 Mur ligase middle domain JW907_03380 PF02875 Mur ligase family, glutamate ligase domain JW907_03395 PF01593 Flavin containing amine oxidoreductase JW907_03405 PF01116 Fructose-bisphosphate aldolase class-II JW907_03430 PF01169 Uncharacterized protein family UPF0016 JW907_03445 PF08486 Stage II sporulation protein JW907_03450 PF00534 Glycosyl transferases group 1 JW907_03455 PF00231 ATP synthase JW907_03465 PF13520 Amino acid permease JW907_03485 PF01520 N-acetylmuramoyl-L-alanine amidase JW907_03510 PF01432 Peptidase family M3 JW907_03515 PF01551 Peptidase family M23 JW907_03515 PF10145 Phage-related minor tail protein JW907_03515 PF01464 Transglycosylase SLT domain JW907_03520 PF03717 Penicillin-binding Protein dimerisation domain JW907_03520 PF00905 Penicillin binding protein transpeptidase domain JW907_03530 PF00977 Histidine biosynthesis protein JW907_03535 PF09363 XFP C-terminal domain JW907_03535 PF09364 XFP N-terminal domain JW907_03535 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JW907_03540 PF01026 TatD related DNase JW907_03545 PF01649 Ribosomal protein S20 JW907_03550 PF00731 AIR carboxylase JW907_03560 PF00183 Hsp90 protein JW907_03565 PF04055 Radical SAM superfamily JW907_03575 PF00124 Photosynthetic reaction centre protein JW907_03590 PF00005 ABC transporter JW907_03590 PF13732 Domain of unknown function (DUF4162) JW907_03600 PF00117 Glutamine amidotransferase class-I JW907_03615 PF08865 Domain of unknown function (DUF1830) JW907_03625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JW907_03625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JW907_03630 PF00266 Aminotransferase class-V JW907_03645 PF01063 Amino-transferase class IV JW907_03655 PF00069 Protein kinase domain JW907_03670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW907_03675 PF01728 FtsJ-like methyltransferase JW907_03675 PF01479 S4 domain JW907_03680 PF00528 Binding-protein-dependent transport system inner membrane component JW907_03685 PF00578 AhpC/TSA family JW907_03685 PF10417 C-terminal domain of 1-Cys peroxiredoxin JW907_03700 PF00578 AhpC/TSA family JW907_03705 PF00293 NUDIX domain JW907_03705 PF09297 NADH pyrophosphatase zinc ribbon domain JW907_03710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW907_03715 PF07664 Ferrous iron transport protein B C terminus JW907_03715 PF07670 Nucleoside recognition JW907_03715 PF02421 Ferrous iron transport protein B JW907_03730 PF02405 Permease MlaE JW907_03740 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JW907_03755 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JW907_03765 PF02910 Fumarate reductase flavoprotein C-term JW907_03765 PF00890 FAD binding domain JW907_03770 PF02080 TrkA-C domain JW907_03770 PF00999 Sodium/hydrogen exchanger family JW907_03770 PF02254 TrkA-N domain JW907_03780 PF00528 Binding-protein-dependent transport system inner membrane component JW907_03785 PF02687 FtsX-like permease family JW907_03785 PF00005 ABC transporter JW907_03785 PF12704 MacB-like periplasmic core domain JW907_03790 PF01195 Peptidyl-tRNA hydrolase JW907_03795 PF02416 mttA/Hcf106 family JW907_03800 PF00737 Photosystem II 10 kDa phosphoprotein JW907_03805 PF02468 Photosystem II reaction centre N protein (psbN) JW907_03810 PF02392 Ycf4 JW907_03815 PF02861 Clp amino terminal domain, pathogenicity island component JW907_03815 PF10431 C-terminal, D2-small domain, of ClpB protein JW907_03815 PF00004 ATPase family associated with various cellular activities (AAA) JW907_03815 PF17871 AAA lid domain JW907_03815 PF07724 AAA domain (Cdc48 subfamily) JW907_03850 PF02633 Creatinine amidohydrolase JW907_03855 PF12697 Alpha/beta hydrolase family JW907_03865 PF13477 Glycosyl transferase 4-like JW907_03865 PF00534 Glycosyl transferases group 1 JW907_03870 PF00733 Asparagine synthase JW907_03870 PF13537 Glutamine amidotransferase domain JW907_03890 PF00534 Glycosyl transferases group 1 JW907_03890 PF13439 Glycosyltransferase Family 4 JW907_03900 PF00534 Glycosyl transferases group 1 JW907_03900 PF13439 Glycosyltransferase Family 4 JW907_03905 PF08241 Methyltransferase domain JW907_03910 PF00534 Glycosyl transferases group 1 JW907_03915 PF05050 Methyltransferase FkbM domain JW907_03925 PF00535 Glycosyl transferase family 2 JW907_03940 PF00578 AhpC/TSA family JW907_03950 PF00733 Asparagine synthase JW907_03950 PF13537 Glutamine amidotransferase domain JW907_03960 PF13477 Glycosyl transferase 4-like JW907_03960 PF00534 Glycosyl transferases group 1 JW907_03965 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JW907_03965 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JW907_03965 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JW907_03970 PF01370 NAD dependent epimerase/dehydratase family JW907_03975 PF13614 AAA domain JW907_03985 PF08502 LeuA allosteric (dimerisation) domain JW907_03985 PF00682 HMGL-like JW907_03990 PF01903 CbiX JW907_04005 PF13230 Glutamine amidotransferases class-II JW907_04015 PF01070 FMN-dependent dehydrogenase JW907_04020 PF01494 FAD binding domain JW907_04025 PF16916 Dimerisation domain of Zinc Transporter JW907_04025 PF01545 Cation efflux family JW907_04030 PF00595 PDZ domain JW907_04030 PF03572 Peptidase family S41 JW907_04040 PF00696 Amino acid kinase family JW907_04055 PF00188 Cysteine-rich secretory protein family JW907_04060 PF00118 TCP-1/cpn60 chaperonin family JW907_04065 PF01078 Magnesium chelatase, subunit ChlI JW907_04065 PF17863 AAA lid domain JW907_04065 PF13519 von Willebrand factor type A domain JW907_04075 PF08041 PetM family of cytochrome b6f complex subunit 7 JW907_04085 PF01891 Cobalt uptake substrate-specific transmembrane region JW907_04110 PF01738 Dienelactone hydrolase family JW907_04125 PF02915 Rubrerythrin JW907_04135 PF00294 pfkB family carbohydrate kinase JW907_04140 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JW907_04145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JW907_04150 PF17782 DprA winged helix domain JW907_04150 PF02481 DNA recombination-mediator protein A JW907_04160 PF00226 DnaJ domain JW907_04160 PF00684 DnaJ central domain JW907_04160 PF01556 DnaJ C terminal domain JW907_04165 PF03808 Glycosyl transferase WecB/TagA/CpsF family JW907_04175 PF00977 Histidine biosynthesis protein JW907_04180 PF00664 ABC transporter transmembrane region JW907_04180 PF00005 ABC transporter JW907_04185 PF02503 Polyphosphate kinase middle domain JW907_04185 PF13090 Polyphosphate kinase C-terminal domain 2 JW907_04185 PF17941 Polyphosphate kinase C-terminal domain 1 JW907_04185 PF13089 Polyphosphate kinase N-terminal domain JW907_04190 PF01336 OB-fold nucleic acid binding domain JW907_04190 PF00152 tRNA synthetases class II (D, K and N) JW907_04195 PF02617 ATP-dependent Clp protease adaptor protein ClpS JW907_04205 PF01189 16S rRNA methyltransferase RsmB/F JW907_04205 PF01029 NusB family JW907_04215 PF02798 Glutathione S-transferase, N-terminal domain JW907_04230 PF02779 Transketolase, pyrimidine binding domain JW907_04230 PF02780 Transketolase, C-terminal domain JW907_04235 PF02355 Protein export membrane protein JW907_04235 PF07549 SecD/SecF GG Motif JW907_04240 PF07549 SecD/SecF GG Motif JW907_04240 PF02355 Protein export membrane protein JW907_04265 PF07465 Photosystem I protein M (PsaM) JW907_04275 PF00672 HAMP domain JW907_04275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_04275 PF00512 His Kinase A (phospho-acceptor) domain JW907_04310 PF01475 Ferric uptake regulator family JW907_04320 PF08245 Mur ligase middle domain JW907_04320 PF02875 Mur ligase family, glutamate ligase domain JW907_04330 PF00528 Binding-protein-dependent transport system inner membrane component JW907_04335 PF00166 Chaperonin 10 Kd subunit JW907_04340 PF00118 TCP-1/cpn60 chaperonin family JW907_04345 PF17760 UvrA interaction domain JW907_04345 PF17755 UvrA DNA-binding domain JW907_04350 PF00551 Formyl transferase JW907_04350 PF01842 ACT domain JW907_04370 PF01809 Putative membrane protein insertion efficiency factor JW907_04375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW907_04380 PF01965 DJ-1/PfpI family JW907_04395 PF00664 ABC transporter transmembrane region JW907_04395 PF00005 ABC transporter JW907_04400 PF07690 Major Facilitator Superfamily JW907_04410 PF00437 Type II/IV secretion system protein JW907_04415 PF07689 KaiB domain JW907_04420 PF03441 FAD binding domain of DNA photolyase JW907_04420 PF00875 DNA photolyase JW907_04425 PF13581 Histidine kinase-like ATPase domain JW907_04455 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JW907_04460 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JW907_04460 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JW907_04465 PF10128 Glucose-6-phosphate dehydrogenase subunit JW907_04465 PF01471 Putative peptidoglycan binding domain JW907_04470 PF02254 TrkA-N domain JW907_04470 PF00999 Sodium/hydrogen exchanger family JW907_04485 PF01134 Glucose inhibited division protein A JW907_04485 PF13932 GidA associated domain JW907_04505 PF18284 DNA methylase N-terminal domain JW907_04505 PF00145 C-5 cytosine-specific DNA methylase JW907_04510 PF01330 RuvA N terminal domain JW907_04510 PF07499 RuvA, C-terminal domain JW907_04520 PF00709 Adenylosuccinate synthetase JW907_04525 PF01386 Ribosomal L25p family JW907_04530 PF01523 Putative modulator of DNA gyrase JW907_04535 PF00004 ATPase family associated with various cellular activities (AAA) JW907_04535 PF17862 AAA+ lid domain JW907_04535 PF01434 Peptidase family M41 JW907_04535 PF06480 FtsH Extracellular JW907_04545 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JW907_04545 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JW907_04550 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JW907_04550 PF02874 ATP synthase alpha/beta family, beta-barrel domain JW907_04560 PF01820 D-ala D-ala ligase N-terminus JW907_04560 PF07478 D-ala D-ala ligase C-terminus JW907_04575 PF01743 Poly A polymerase head domain JW907_04575 PF00571 CBS domain JW907_04580 PF09115 DNA polymerase III, delta subunit, C terminal JW907_04585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JW907_04585 PF00529 HlyD membrane-fusion protein of T1SS JW907_04590 PF02887 Pyruvate kinase, alpha/beta domain JW907_04590 PF00224 Pyruvate kinase, barrel domain JW907_04590 PF00391 PEP-utilising enzyme, mobile domain JW907_04610 PF03186 CobD/Cbib protein JW907_04625 PF04055 Radical SAM superfamily JW907_04640 PF01121 Dephospho-CoA kinase JW907_04645 PF00989 PAS fold JW907_04645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_04645 PF00512 His Kinase A (phospho-acceptor) domain JW907_04650 PF02514 CobN/Magnesium Chelatase JW907_04655 PF02632 BioY family JW907_04670 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JW907_04670 PF00361 Proton-conducting membrane transporter JW907_04670 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JW907_04675 PF00361 Proton-conducting membrane transporter JW907_04685 PF00462 Glutaredoxin JW907_04690 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JW907_04690 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JW907_04695 PF01555 DNA methylase JW907_04705 PF00330 Aconitase family (aconitate hydratase) JW907_04715 PF02308 MgtC family JW907_04720 PF00571 CBS domain JW907_04720 PF03448 MgtE intracellular N domain JW907_04720 PF01769 Divalent cation transporter JW907_04735 PF03707 Bacterial signalling protein N terminal repeat JW907_04735 PF00563 EAL domain JW907_04735 PF00990 Diguanylate cyclase, GGDEF domain JW907_04745 PF00266 Aminotransferase class-V JW907_04755 PF12706 Beta-lactamase superfamily domain JW907_04770 PF00561 alpha/beta hydrolase fold JW907_04780 PF00795 Carbon-nitrogen hydrolase JW907_04790 PF02547 Queuosine biosynthesis protein JW907_04800 PF00360 Phytochrome region JW907_04800 PF00990 Diguanylate cyclase, GGDEF domain JW907_04800 PF01590 GAF domain JW907_04800 PF00563 EAL domain JW907_04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_04805 PF00512 His Kinase A (phospho-acceptor) domain JW907_04805 PF00989 PAS fold JW907_04810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW907_04810 PF00005 ABC transporter JW907_04815 PF00459 Inositol monophosphatase family JW907_04820 PF02881 SRP54-type protein, helical bundle domain JW907_04820 PF00448 SRP54-type protein, GTPase domain JW907_04825 PF00155 Aminotransferase class I and II JW907_04845 PF01464 Transglycosylase SLT domain JW907_04845 PF14718 Soluble lytic murein transglycosylase L domain JW907_04895 PF00226 DnaJ domain JW907_04895 PF01556 DnaJ C terminal domain JW907_04900 PF00482 Type II secretion system (T2SS), protein F JW907_04905 PF00437 Type II/IV secretion system protein JW907_04910 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JW907_04910 PF00437 Type II/IV secretion system protein JW907_04940 PF00694 Aconitase C-terminal domain JW907_04945 PF00962 Adenosine/AMP deaminase JW907_04965 PF01930 Domain of unknown function DUF83 JW907_04965 PF01867 CRISPR associated protein Cas1 JW907_04970 PF09827 CRISPR associated protein Cas2 JW907_04980 PF18019 HD domain JW907_04990 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 JW907_05000 PF00300 Histidine phosphatase superfamily (branch 1) JW907_05005 PF00291 Pyridoxal-phosphate dependent enzyme JW907_05015 PF18698 Histidine kinase sensor domain JW907_05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_05015 PF00989 PAS fold JW907_05015 PF00672 HAMP domain JW907_05015 PF00512 His Kinase A (phospho-acceptor) domain JW907_05020 PF00486 Transcriptional regulatory protein, C terminal JW907_05020 PF00072 Response regulator receiver domain JW907_05020 PF01627 Hpt domain JW907_05025 PF00690 Cation transporter/ATPase, N-terminus JW907_05025 PF00689 Cation transporting ATPase, C-terminus JW907_05030 PF01926 50S ribosome-binding GTPase JW907_05040 PF00501 AMP-binding enzyme JW907_05040 PF13193 AMP-binding enzyme C-terminal domain JW907_05050 PF17770 Ribonuclease J C-terminal domain JW907_05050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JW907_05050 PF00753 Metallo-beta-lactamase superfamily JW907_05055 PF00701 Dihydrodipicolinate synthetase family JW907_05065 PF03807 NADP oxidoreductase coenzyme F420-dependent JW907_05065 PF14748 Pyrroline-5-carboxylate reductase dimerisation JW907_05070 PF04472 Cell division protein SepF JW907_05075 PF00672 HAMP domain JW907_05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_05075 PF00512 His Kinase A (phospho-acceptor) domain JW907_05075 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB JW907_05075 PF08448 PAS fold JW907_05080 PF01641 SelR domain JW907_05085 PF00425 chorismate binding enzyme JW907_05095 PF00175 Oxidoreductase NAD-binding domain JW907_05095 PF00970 Oxidoreductase FAD-binding domain JW907_05095 PF01383 CpcD/allophycocyanin linker domain JW907_05100 PF00990 Diguanylate cyclase, GGDEF domain JW907_05115 PF00312 Ribosomal protein S15 JW907_05120 PF03466 LysR substrate binding domain JW907_05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW907_05125 PF00805 Pentapeptide repeats (8 copies) JW907_05125 PF00069 Protein kinase domain JW907_05135 PF06418 CTP synthase N-terminus JW907_05135 PF00117 Glutamine amidotransferase class-I JW907_05145 PF04055 Radical SAM superfamily JW907_05145 PF13282 Domain of unknown function (DUF4070) JW907_05145 PF02310 B12 binding domain JW907_05150 PF00149 Calcineurin-like phosphoesterase JW907_05155 PF00892 EamA-like transporter family JW907_05165 PF04073 Aminoacyl-tRNA editing domain JW907_05165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW907_05165 PF03129 Anticodon binding domain JW907_05180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JW907_05190 PF00343 Carbohydrate phosphorylase JW907_05195 PF07690 Major Facilitator Superfamily JW907_05200 PF01761 3-dehydroquinate synthase JW907_05215 PF01029 NusB family JW907_05230 PF01556 DnaJ C terminal domain JW907_05230 PF00684 DnaJ central domain JW907_05230 PF00226 DnaJ domain JW907_05235 PF00012 Hsp70 protein JW907_05240 PF11016 Protein of unknown function (DUF2854) JW907_05245 PF04461 Protein of unknown function (DUF520) JW907_05250 PF13458 Periplasmic binding protein JW907_05260 PF00033 Cytochrome b/b6/petB JW907_05265 PF00032 Cytochrome b(C-terminal)/b6/petD JW907_05280 PF16124 RecQ zinc-binding JW907_05280 PF00271 Helicase conserved C-terminal domain JW907_05280 PF00270 DEAD/DEAH box helicase JW907_05290 PF13419 Haloacid dehalogenase-like hydrolase JW907_05305 PF01553 Acyltransferase JW907_05315 PF01430 Hsp33 protein JW907_05320 PF03819 MazG nucleotide pyrophosphohydrolase domain JW907_05325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JW907_05335 PF00085 Thioredoxin JW907_05340 PF08078 PsaX family JW907_05355 PF00462 Glutaredoxin JW907_05355 PF08534 Redoxin JW907_05370 PF00403 Heavy-metal-associated domain JW907_05380 PF01916 Deoxyhypusine synthase JW907_05385 PF00005 ABC transporter JW907_05390 PF01297 Zinc-uptake complex component A periplasmic JW907_05395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JW907_05410 PF01926 50S ribosome-binding GTPase JW907_05410 PF12631 MnmE helical domain JW907_05410 PF10396 GTP-binding protein TrmE N-terminus JW907_05415 PF00692 dUTPase JW907_05425 PF00750 tRNA synthetases class I (R) JW907_05425 PF03485 Arginyl tRNA synthetase N terminal domain JW907_05425 PF05746 DALR anticodon binding domain JW907_05435 PF03742 PetN JW907_05445 PF12795 Mechanosensitive ion channel porin domain JW907_05445 PF00924 Mechanosensitive ion channel JW907_05445 PF12794 Mechanosensitive ion channel inner membrane domain 1 JW907_05455 PF00140 Sigma-70 factor, region 1.2 JW907_05455 PF04545 Sigma-70, region 4 JW907_05455 PF04539 Sigma-70 region 3 JW907_05455 PF04542 Sigma-70 region 2 JW907_05460 PF03099 Biotin/lipoate A/B protein ligase family JW907_05465 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JW907_05465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JW907_05480 PF06298 Photosystem II protein Y (PsbY) JW907_05490 PF01098 Cell cycle protein JW907_05495 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JW907_05520 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_05525 PF02504 Fatty acid synthesis protein JW907_05530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JW907_05530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JW907_05555 PF00682 HMGL-like JW907_05555 PF08502 LeuA allosteric (dimerisation) domain JW907_05560 PF06426 Serine acetyltransferase, N-terminal JW907_05560 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_05590 PF03120 NAD-dependent DNA ligase OB-fold domain JW907_05590 PF01653 NAD-dependent DNA ligase adenylation domain JW907_05590 PF00533 BRCA1 C Terminus (BRCT) domain JW907_05590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JW907_05590 PF12826 Helix-hairpin-helix motif JW907_05595 PF01513 ATP-NAD kinase JW907_05600 PF05368 NmrA-like family JW907_05610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JW907_05640 PF01521 Iron-sulphur cluster biosynthesis JW907_05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW907_05645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JW907_05650 PF04015 Domain of unknown function (DUF362) JW907_05670 PF00011 Hsp20/alpha crystallin family JW907_05675 PF00462 Glutaredoxin JW907_05680 PF01722 BolA-like protein JW907_05685 PF00072 Response regulator receiver domain JW907_05685 PF01627 Hpt domain JW907_05685 PF00512 His Kinase A (phospho-acceptor) domain JW907_05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_05685 PF00672 HAMP domain JW907_05685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JW907_05690 PF02529 Cytochrome B6-F complex subunit 5 JW907_05695 PF01926 50S ribosome-binding GTPase JW907_05695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JW907_05705 PF10369 Small subunit of acetolactate synthase JW907_05710 PF00684 DnaJ central domain JW907_05710 PF01556 DnaJ C terminal domain JW907_05710 PF00226 DnaJ domain JW907_05715 PF01202 Shikimate kinase JW907_05730 PF01625 Peptide methionine sulfoxide reductase JW907_05740 PF13193 AMP-binding enzyme C-terminal domain JW907_05740 PF00501 AMP-binding enzyme JW907_05740 PF16177 Acetyl-coenzyme A synthetase N-terminus JW907_05755 PF00005 ABC transporter JW907_05760 PF02627 Carboxymuconolactone decarboxylase family JW907_05785 PF12327 FtsZ family, C-terminal domain JW907_05785 PF00091 Tubulin/FtsZ family, GTPase domain JW907_05790 PF00950 ABC 3 transport family JW907_05795 PF01940 Integral membrane protein DUF92 JW907_05810 PF01531 Glycosyl transferase family 11 JW907_05815 PF00535 Glycosyl transferase family 2 JW907_05820 PF00535 Glycosyl transferase family 2 JW907_05825 PF01207 Dihydrouridine synthase (Dus) JW907_05830 PF01228 Glycine radical JW907_05830 PF02901 Pyruvate formate lyase-like JW907_05845 PF03193 RsgA GTPase JW907_05860 PF03471 Transporter associated domain JW907_05860 PF01595 Cyclin M transmembrane N-terminal domain JW907_05860 PF00571 CBS domain JW907_05870 PF02597 ThiS family JW907_05875 PF00291 Pyridoxal-phosphate dependent enzyme JW907_05880 PF00547 Urease, gamma subunit JW907_05885 PF01812 5-formyltetrahydrofolate cyclo-ligase family JW907_05890 PF02754 Cysteine-rich domain JW907_05895 PF02773 S-adenosylmethionine synthetase, C-terminal domain JW907_05895 PF00438 S-adenosylmethionine synthetase, N-terminal domain JW907_05895 PF02772 S-adenosylmethionine synthetase, central domain JW907_05910 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JW907_05910 PF00953 Glycosyl transferase family 4 JW907_05915 PF08240 Alcohol dehydrogenase GroES-like domain JW907_05915 PF00107 Zinc-binding dehydrogenase JW907_05920 PF03562 MltA specific insert domain JW907_05920 PF06725 3D domain JW907_05935 PF00121 Triosephosphate isomerase JW907_05945 PF13614 AAA domain JW907_05950 PF00664 ABC transporter transmembrane region JW907_05950 PF00005 ABC transporter JW907_05955 PF10396 GTP-binding protein TrmE N-terminus JW907_05955 PF01926 50S ribosome-binding GTPase JW907_05955 PF12631 MnmE helical domain JW907_05960 PF16639 Apocytochrome F, N-terminal JW907_05960 PF01333 Apocytochrome F, C-terminal JW907_05965 PF00355 Rieske [2Fe-2S] domain JW907_05975 PF00502 Phycobilisome protein JW907_05980 PF00502 Phycobilisome protein JW907_05985 PF01383 CpcD/allophycocyanin linker domain JW907_05990 PF00936 BMC domain JW907_05995 PF00902 Sec-independent protein translocase protein (TatC) JW907_06000 PF00270 DEAD/DEAH box helicase JW907_06000 PF00271 Helicase conserved C-terminal domain JW907_06000 PF03461 TRCF domain JW907_06000 PF02559 CarD-like/TRCF domain JW907_06000 PF17757 UvrB interaction domain JW907_06005 PF04321 RmlD substrate binding domain JW907_06010 PF03109 ABC1 family JW907_06025 PF00936 BMC domain JW907_06030 PF00936 BMC domain JW907_06035 PF03319 Ethanolamine utilisation protein EutN/carboxysome JW907_06040 PF00101 Ribulose bisphosphate carboxylase, small chain JW907_06040 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_06050 PF01938 TRAM domain JW907_06050 PF05958 tRNA (Uracil-5-)-methyltransferase JW907_06070 PF00266 Aminotransferase class-V JW907_06080 PF02943 Ferredoxin thioredoxin reductase catalytic beta chain JW907_06090 PF07690 Major Facilitator Superfamily JW907_06100 PF04371 Porphyromonas-type peptidyl-arginine deiminase JW907_06105 PF01197 Ribosomal protein L31 JW907_06110 PF00380 Ribosomal protein S9/S16 JW907_06115 PF00572 Ribosomal protein L13 JW907_06120 PF01416 tRNA pseudouridine synthase JW907_06125 PF01196 Ribosomal protein L17 JW907_06130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JW907_06130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JW907_06130 PF01000 RNA polymerase Rpb3/RpoA insert domain JW907_06135 PF00411 Ribosomal protein S11 JW907_06140 PF00416 Ribosomal protein S13/S18 JW907_06145 PF00444 Ribosomal protein L36 JW907_06150 PF01176 Translation initiation factor 1A / IF-1 JW907_06160 PF00344 SecY translocase JW907_06165 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JW907_06170 PF00333 Ribosomal protein S5, N-terminal domain JW907_06170 PF03719 Ribosomal protein S5, C-terminal domain JW907_06175 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JW907_06180 PF00347 Ribosomal protein L6 JW907_06185 PF00410 Ribosomal protein S8 JW907_06190 PF00673 ribosomal L5P family C-terminus JW907_06190 PF00281 Ribosomal protein L5 JW907_06195 PF00467 KOW motif JW907_06195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JW907_06200 PF00238 Ribosomal protein L14p/L23e JW907_06205 PF00366 Ribosomal protein S17 JW907_06210 PF00831 Ribosomal L29 protein JW907_06215 PF00252 Ribosomal protein L16p/L10e JW907_06220 PF00189 Ribosomal protein S3, C-terminal domain JW907_06220 PF07650 KH domain JW907_06225 PF00237 Ribosomal protein L22p/L17e JW907_06230 PF00203 Ribosomal protein S19 JW907_06235 PF03947 Ribosomal Proteins L2, C-terminal domain JW907_06235 PF00181 Ribosomal Proteins L2, RNA binding domain JW907_06240 PF00276 Ribosomal protein L23 JW907_06245 PF00573 Ribosomal protein L4/L1 family JW907_06250 PF00297 Ribosomal protein L3 JW907_06255 PF01702 Queuine tRNA-ribosyltransferase JW907_06280 PF17862 AAA+ lid domain JW907_06280 PF00004 ATPase family associated with various cellular activities (AAA) JW907_06280 PF01434 Peptidase family M41 JW907_06295 PF08245 Mur ligase middle domain JW907_06295 PF02875 Mur ligase family, glutamate ligase domain JW907_06300 PF01594 AI-2E family transporter JW907_06320 PF01118 Semialdehyde dehydrogenase, NAD binding domain JW907_06320 PF02774 Semialdehyde dehydrogenase, dimerisation domain JW907_06330 PF00885 6,7-dimethyl-8-ribityllumazine synthase JW907_06340 PF05690 Thiazole biosynthesis protein ThiG JW907_06355 PF00814 Glycoprotease family JW907_06365 PF00149 Calcineurin-like phosphoesterase JW907_06380 PF01926 50S ribosome-binding GTPase JW907_06380 PF07650 KH domain JW907_06385 PF02472 Biopolymer transport protein ExbD/TolR JW907_06390 PF00625 Guanylate kinase JW907_06395 PF00005 ABC transporter JW907_06405 PF00107 Zinc-binding dehydrogenase JW907_06405 PF08240 Alcohol dehydrogenase GroES-like domain JW907_06415 PF13180 PDZ domain JW907_06440 PF01131 DNA topoisomerase JW907_06440 PF01751 Toprim domain JW907_06440 PF13368 Topoisomerase C-terminal repeat JW907_06445 PF00719 Inorganic pyrophosphatase JW907_06455 PF00106 short chain dehydrogenase JW907_06460 PF12697 Alpha/beta hydrolase family JW907_06465 PF01040 UbiA prenyltransferase family JW907_06470 PF02628 Cytochrome oxidase assembly protein JW907_06490 PF03129 Anticodon binding domain JW907_06490 PF13393 Histidyl-tRNA synthetase JW907_06500 PF02463 RecF/RecN/SMC N terminal domain JW907_06510 PF00005 ABC transporter JW907_06515 PF00331 Glycosyl hydrolase family 10 JW907_06515 PF12791 Anti-sigma factor N-terminus JW907_06525 PF00005 ABC transporter JW907_06530 PF01458 Uncharacterized protein family (UPF0051) JW907_06535 PF13545 Crp-like helix-turn-helix domain JW907_06535 PF00027 Cyclic nucleotide-binding domain JW907_06540 PF00258 Flavodoxin JW907_06550 PF18331 PKHD-type hydroxylase C-terminal domain JW907_06550 PF13640 2OG-Fe(II) oxygenase superfamily JW907_06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_06560 PF16736 Single Cache-like JW907_06560 PF00512 His Kinase A (phospho-acceptor) domain JW907_06560 PF00989 PAS fold JW907_06565 PF00486 Transcriptional regulatory protein, C terminal JW907_06565 PF01627 Hpt domain JW907_06565 PF00072 Response regulator receiver domain JW907_06570 PF01960 ArgJ family JW907_06580 PF00311 Phosphoenolpyruvate carboxylase JW907_06590 PF00485 Phosphoribulokinase / Uridine kinase family JW907_06595 PF01783 Ribosomal L32p protein family JW907_06620 PF00403 Heavy-metal-associated domain JW907_06625 PF05685 Putative restriction endonuclease JW907_06640 PF01925 Sulfite exporter TauE/SafE JW907_06645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW907_06650 PF02463 RecF/RecN/SMC N terminal domain JW907_06650 PF06470 SMC proteins Flexible Hinge Domain JW907_06660 PF01668 SmpB protein JW907_06665 PF01081 KDPG and KHG aldolase JW907_06675 PF00535 Glycosyl transferase family 2 JW907_06675 PF03552 Cellulose synthase JW907_06675 PF03170 Bacterial cellulose synthase subunit JW907_06675 PF07238 PilZ domain JW907_06690 PF04029 2-phosphosulpholactate phosphatase JW907_06695 PF01040 UbiA prenyltransferase family JW907_06700 PF01544 CorA-like Mg2+ transporter protein JW907_06715 PF07085 DRTGG domain JW907_06740 PF13439 Glycosyltransferase Family 4 JW907_06745 PF06838 Methionine gamma-lyase JW907_06755 PF03776 Septum formation topological specificity factor MinE JW907_06760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JW907_06765 PF03775 Septum formation inhibitor MinC, C-terminal domain JW907_06775 PF07444 Ycf66 protein N-terminus JW907_06780 PF06596 Photosystem II reaction centre X protein (PsbX) JW907_06790 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JW907_06790 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JW907_06795 PF00115 Cytochrome C and Quinol oxidase polypeptide I JW907_06800 PF00510 Cytochrome c oxidase subunit III JW907_06820 PF00005 ABC transporter JW907_06830 PF00563 EAL domain JW907_06830 PF00990 Diguanylate cyclase, GGDEF domain JW907_06830 PF03707 Bacterial signalling protein N terminal repeat JW907_06845 PF00579 tRNA synthetases class I (W and Y) JW907_06850 PF11838 ERAP1-like C-terminal domain JW907_06850 PF01433 Peptidase family M1 domain JW907_06855 PF02594 Uncharacterised ACR, YggU family COG1872 JW907_06860 PF01814 Hemerythrin HHE cation binding domain JW907_06880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_06895 PF01113 Dihydrodipicolinate reductase, N-terminus JW907_06895 PF05173 Dihydrodipicolinate reductase, C-terminus JW907_06905 PF00909 Ammonium Transporter Family JW907_06910 PF02390 Putative methyltransferase JW907_06920 PF12706 Beta-lactamase superfamily domain JW907_06945 PF12320 Type 5 capsule protein repressor C-terminal domain JW907_06945 PF00149 Calcineurin-like phosphoesterase JW907_06950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JW907_06950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JW907_06950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JW907_06950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JW907_06960 PF01497 Periplasmic binding protein JW907_06965 PF03065 Glycosyl hydrolase family 57 JW907_06965 PF09210 Domain of unknown function (DUF1957) JW907_06970 PF02978 Signal peptide binding domain JW907_06970 PF02881 SRP54-type protein, helical bundle domain JW907_06970 PF00448 SRP54-type protein, GTPase domain JW907_06980 PF14403 Circularly permuted ATP-grasp type 2 JW907_06985 PF00133 tRNA synthetases class I (I, L, M and V) JW907_06985 PF10458 Valyl tRNA synthetase tRNA binding arm JW907_06985 PF08264 Anticodon-binding domain of tRNA JW907_06985 PF14159 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase JW907_06990 PF02540 NAD synthase JW907_06990 PF00958 GMP synthase C terminal domain JW907_06990 PF00117 Glutamine amidotransferase class-I JW907_06995 PF00588 SpoU rRNA Methylase family JW907_06995 PF08032 RNA 2'-O ribose methyltransferase substrate binding JW907_07000 PF01737 YCF9 JW907_07005 PF01551 Peptidase family M23 JW907_07005 PF04225 Opacity-associated protein A LysM-like domain JW907_07010 PF00427 Phycobilisome Linker polypeptide JW907_07015 PF00427 Phycobilisome Linker polypeptide JW907_07020 PF00427 Phycobilisome Linker polypeptide JW907_07025 PF03130 PBS lyase HEAT-like repeat JW907_07030 PF03130 PBS lyase HEAT-like repeat JW907_07035 PF01383 CpcD/allophycocyanin linker domain JW907_07040 PF00427 Phycobilisome Linker polypeptide JW907_07040 PF01383 CpcD/allophycocyanin linker domain JW907_07045 PF00502 Phycobilisome protein JW907_07050 PF00502 Phycobilisome protein JW907_07055 PF03167 Uracil DNA glycosylase superfamily JW907_07070 PF01209 ubiE/COQ5 methyltransferase family JW907_07080 PF01933 Uncharacterised protein family UPF0052 JW907_07090 PF01571 Aminomethyltransferase folate-binding domain JW907_07095 PF13847 Methyltransferase domain JW907_07100 PF02581 Thiamine monophosphate synthase JW907_07100 PF17792 ThiD2 family JW907_07110 PF01555 DNA methylase JW907_07125 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JW907_07125 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JW907_07140 PF02576 RimP N-terminal domain JW907_07145 PF00575 S1 RNA binding domain JW907_07145 PF08529 NusA N-terminal domain JW907_07145 PF13184 NusA-like KH domain JW907_07155 PF00202 Aminotransferase class-III JW907_07165 PF10502 Signal peptidase, peptidase S26 JW907_07185 PF03949 Malic enzyme, NAD binding domain JW907_07185 PF00390 Malic enzyme, N-terminal domain JW907_07195 PF00999 Sodium/hydrogen exchanger family JW907_07195 PF03471 Transporter associated domain JW907_07200 PF10693 Protein of unknown function (DUF2499) JW907_07205 PF00107 Zinc-binding dehydrogenase JW907_07205 PF08240 Alcohol dehydrogenase GroES-like domain JW907_07210 PF13411 MerR HTH family regulatory protein JW907_07210 PF00145 C-5 cytosine-specific DNA methylase JW907_07225 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JW907_07230 PF01066 CDP-alcohol phosphatidyltransferase JW907_07240 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JW907_07270 PF09150 Orange carotenoid protein, N-terminal JW907_07285 PF00300 Histidine phosphatase superfamily (branch 1) JW907_07300 PF00072 Response regulator receiver domain JW907_07300 PF00486 Transcriptional regulatory protein, C terminal JW907_07315 PF01467 Cytidylyltransferase-like JW907_07325 PF04168 A predicted alpha-helical domain with a conserved ER motif. JW907_07325 PF14403 Circularly permuted ATP-grasp type 2 JW907_07340 PF00676 Dehydrogenase E1 component JW907_07350 PF13580 SIS domain JW907_07365 PF02570 Precorrin-8X methylmutase JW907_07370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW907_07385 PF02082 Transcriptional regulator JW907_07395 PF00829 Ribosomal prokaryotic L21 protein JW907_07400 PF01016 Ribosomal L27 protein JW907_07420 PF00005 ABC transporter JW907_07420 PF08402 TOBE domain JW907_07440 PF00999 Sodium/hydrogen exchanger family JW907_07445 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JW907_07450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JW907_07455 PF00330 Aconitase family (aconitate hydratase) JW907_07455 PF06434 Aconitate hydratase 2 N-terminus JW907_07455 PF11791 Aconitate B N-terminal domain JW907_07460 PF13614 AAA domain JW907_07465 PF01409 tRNA synthetases class II core domain (F) JW907_07465 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JW907_07475 PF01476 LysM domain JW907_07475 PF03734 L,D-transpeptidase catalytic domain JW907_07485 PF01218 Coproporphyrinogen III oxidase JW907_07490 PF05140 ResB-like family JW907_07500 PF00403 Heavy-metal-associated domain JW907_07595 PF00202 Aminotransferase class-III JW907_07615 PF02080 TrkA-C domain JW907_07615 PF02254 TrkA-N domain JW907_07630 PF00270 DEAD/DEAH box helicase JW907_07630 PF00271 Helicase conserved C-terminal domain JW907_07630 PF17764 3′ DNA-binding domain (3′BD) JW907_07630 PF18074 Primosomal protein N C-terminal domain JW907_07630 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JW907_07640 PF00171 Aldehyde dehydrogenase family JW907_07655 PF00534 Glycosyl transferases group 1 JW907_07655 PF13439 Glycosyltransferase Family 4 JW907_07670 PF03358 NADPH-dependent FMN reductase JW907_07675 PF00490 Delta-aminolevulinic acid dehydratase JW907_07685 PF00557 Metallopeptidase family M24 JW907_07690 PF03441 FAD binding domain of DNA photolyase JW907_07690 PF00875 DNA photolyase JW907_07700 PF01740 STAS domain JW907_07705 PF00636 Ribonuclease III domain JW907_07710 PF12966 N-ATPase, AtpR subunit JW907_07715 PF00119 ATP synthase A chain JW907_07720 PF00137 ATP synthase subunit C JW907_07725 PF00430 ATP synthase B/B' CF(0) JW907_07730 PF00430 ATP synthase B/B' CF(0) JW907_07735 PF00213 ATP synthase delta (OSCP) subunit JW907_07740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JW907_07740 PF02874 ATP synthase alpha/beta family, beta-barrel domain JW907_07740 PF00306 ATP synthase alpha/beta chain, C terminal domain JW907_07745 PF00483 Nucleotidyl transferase JW907_07750 PF00989 PAS fold JW907_07750 PF00672 HAMP domain JW907_07750 PF00512 His Kinase A (phospho-acceptor) domain JW907_07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_07760 PF00290 Tryptophan synthase alpha chain JW907_07765 PF01098 Cell cycle protein JW907_07775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JW907_07775 PF00005 ABC transporter JW907_07780 PF01716 Manganese-stabilising protein / photosystem II polypeptide JW907_07790 PF00069 Protein kinase domain JW907_07795 PF00762 Ferrochelatase JW907_07800 PF10664 Cyanobacterial and plastid NDH-1 subunit M JW907_07810 PF16736 Single Cache-like JW907_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_07810 PF00989 PAS fold JW907_07810 PF00512 His Kinase A (phospho-acceptor) domain JW907_07815 PF00072 Response regulator receiver domain JW907_07815 PF00486 Transcriptional regulatory protein, C terminal JW907_07820 PF00999 Sodium/hydrogen exchanger family JW907_07825 PF01134 Glucose inhibited division protein A JW907_07830 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JW907_07835 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus JW907_07845 PF00005 ABC transporter JW907_07850 PF03808 Glycosyl transferase WecB/TagA/CpsF family JW907_07855 PF00124 Photosynthetic reaction centre protein JW907_07860 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JW907_07865 PF00483 Nucleotidyl transferase JW907_07870 PF16363 GDP-mannose 4,6 dehydratase JW907_07875 PF14437 MafB19-like deaminase JW907_07880 PF00842 Alanine racemase, C-terminal domain JW907_07880 PF01168 Alanine racemase, N-terminal domain JW907_07885 PF01177 Asp/Glu/Hydantoin racemase JW907_07890 PF01027 Inhibitor of apoptosis-promoting Bax1 JW907_07895 PF01264 Chorismate synthase JW907_07900 PF01521 Iron-sulphur cluster biosynthesis JW907_07905 PF08338 Domain of unknown function (DUF1731) JW907_07905 PF01370 NAD dependent epimerase/dehydratase family JW907_07915 PF13202 EF hand JW907_07915 PF00923 Transaldolase/Fructose-6-phosphate aldolase JW907_07930 PF00578 AhpC/TSA family JW907_07945 PF00800 Prephenate dehydratase JW907_07950 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JW907_07950 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JW907_07965 PF04542 Sigma-70 region 2 JW907_07965 PF08281 Sigma-70, region 4 JW907_07975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JW907_07975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JW907_07990 PF12399 Branched-chain amino acid ATP-binding cassette transporter JW907_07990 PF00005 ABC transporter JW907_08000 PF00588 SpoU rRNA Methylase family JW907_08010 PF00392 Bacterial regulatory proteins, gntR family JW907_08015 PF00696 Amino acid kinase family JW907_08015 PF01472 PUA domain JW907_08020 PF00459 Inositol monophosphatase family JW907_08050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JW907_08050 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JW907_08050 PF00361 Proton-conducting membrane transporter JW907_08055 PF00361 Proton-conducting membrane transporter JW907_08065 PF00464 Serine hydroxymethyltransferase JW907_08070 PF00953 Glycosyl transferase family 4 JW907_08075 PF18146 Damage-inducible protein CinA KH domain JW907_08075 PF00994 Probable molybdopterin binding domain JW907_08075 PF02464 Competence-damaged protein JW907_08110 PF00027 Cyclic nucleotide-binding domain JW907_08110 PF13545 Crp-like helix-turn-helix domain JW907_08160 PF01740 STAS domain JW907_08160 PF00916 Sulfate permease family JW907_08165 PF02245 Methylpurine-DNA glycosylase (MPG) JW907_08175 PF01556 DnaJ C terminal domain JW907_08175 PF00226 DnaJ domain JW907_08180 PF00012 Hsp70 protein JW907_08190 PF01872 RibD C-terminal domain JW907_08190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JW907_08200 PF08525 Opacity-associated protein A N-terminal motif JW907_08200 PF01551 Peptidase family M23 JW907_08200 PF01476 LysM domain JW907_08205 PF02602 Uroporphyrinogen-III synthase HemD JW907_08210 PF06206 CpeT/CpcT family (DUF1001) JW907_08215 PF01790 Prolipoprotein diacylglyceryl transferase JW907_08220 PF00453 Ribosomal protein L20 JW907_08225 PF01632 Ribosomal protein L35 JW907_08235 PF17774 Putative RNA-binding domain in YlmH JW907_08235 PF01479 S4 domain JW907_08250 PF12849 PBP superfamily domain JW907_08255 PF00528 Binding-protein-dependent transport system inner membrane component JW907_08260 PF00528 Binding-protein-dependent transport system inner membrane component JW907_08265 PF00005 ABC transporter JW907_08270 PF01522 Polysaccharide deacetylase JW907_08285 PF03575 Peptidase family S51 JW907_08290 PF08245 Mur ligase middle domain JW907_08290 PF02875 Mur ligase family, glutamate ligase domain JW907_08290 PF08443 RimK-like ATP-grasp domain JW907_08310 PF05378 Hydantoinase/oxoprolinase N-terminal region JW907_08310 PF01968 Hydantoinase/oxoprolinase JW907_08325 PF13476 AAA domain JW907_08330 PF00092 von Willebrand factor type A domain JW907_08340 PF00106 short chain dehydrogenase JW907_08345 PF04030 D-arabinono-1,4-lactone oxidase JW907_08345 PF01565 FAD binding domain JW907_08355 PF01040 UbiA prenyltransferase family JW907_08360 PF01145 SPFH domain / Band 7 family JW907_08365 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JW907_08380 PF00877 NlpC/P60 family JW907_08385 PF00478 IMP dehydrogenase / GMP reductase domain JW907_08395 PF02092 Glycyl-tRNA synthetase beta subunit JW907_08400 PF03725 3' exoribonuclease family, domain 2 JW907_08400 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JW907_08400 PF00013 KH domain JW907_08400 PF01138 3' exoribonuclease family, domain 1 JW907_08400 PF00575 S1 RNA binding domain JW907_08415 PF01040 UbiA prenyltransferase family JW907_08420 PF17275 Family of unknown function (DUF5340) JW907_08425 PF00583 Acetyltransferase (GNAT) family JW907_08430 PF00881 Nitroreductase family JW907_08440 PF08267 Cobalamin-independent synthase, N-terminal domain JW907_08440 PF01717 Cobalamin-independent synthase, Catalytic domain JW907_08445 PF02657 Fe-S metabolism associated domain JW907_08455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JW907_08455 PF03129 Anticodon binding domain JW907_08455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JW907_08460 PF00486 Transcriptional regulatory protein, C terminal JW907_08460 PF00072 Response regulator receiver domain JW907_08465 PF13662 Toprim domain JW907_08465 PF02132 RecR protein JW907_08465 PF00633 Helix-hairpin-helix motif JW907_08470 PF00009 Elongation factor Tu GTP binding domain JW907_08470 PF16658 Class II release factor RF3, C-terminal domain JW907_08475 PF16363 GDP-mannose 4,6 dehydratase JW907_08495 PF00762 Ferrochelatase JW907_08500 PF01062 Bestrophin, RFP-TM, chloride channel JW907_08505 PF04945 YHS domain JW907_08525 PF00012 Hsp70 protein JW907_08530 PF00762 Ferrochelatase JW907_08545 PF02774 Semialdehyde dehydrogenase, dimerisation domain JW907_08545 PF01118 Semialdehyde dehydrogenase, NAD binding domain JW907_08560 PF00069 Protein kinase domain JW907_08560 PF03793 PASTA domain JW907_08570 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_08570 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JW907_08575 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JW907_08590 PF11967 Recombination protein O N terminal JW907_08590 PF02565 Recombination protein O C terminal JW907_08600 PF07228 Stage II sporulation protein E (SpoIIE) JW907_08600 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JW907_08610 PF05190 MutS family domain IV JW907_08610 PF00488 MutS domain V JW907_08610 PF05192 MutS domain III JW907_08610 PF01624 MutS domain I JW907_08610 PF05188 MutS domain II JW907_08615 PF07690 Major Facilitator Superfamily JW907_08620 PF03109 ABC1 family JW907_08635 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JW907_08645 PF00595 PDZ domain JW907_08645 PF03572 Peptidase family S41 JW907_08695 PF00815 Histidinol dehydrogenase JW907_08705 PF05496 Holliday junction DNA helicase RuvB P-loop domain JW907_08705 PF05491 RuvB C-terminal winged helix domain JW907_08705 PF17864 RuvB AAA lid domain JW907_08710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JW907_08710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JW907_08715 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JW907_08725 PF01192 RNA polymerase Rpb6 JW907_08740 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JW907_08745 PF10417 C-terminal domain of 1-Cys peroxiredoxin JW907_08745 PF00578 AhpC/TSA family JW907_08755 PF01594 AI-2E family transporter JW907_08770 PF05195 Aminopeptidase P, N-terminal domain JW907_08770 PF00557 Metallopeptidase family M24 JW907_08775 PF00155 Aminotransferase class I and II JW907_08780 PF00216 Bacterial DNA-binding protein JW907_08785 PF00162 Phosphoglycerate kinase JW907_08790 PF00582 Universal stress protein family JW907_08810 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JW907_08815 PF01241 Photosystem I psaG / psaK JW907_08825 PF02887 Pyruvate kinase, alpha/beta domain JW907_08825 PF00391 PEP-utilising enzyme, mobile domain JW907_08825 PF00224 Pyruvate kinase, barrel domain JW907_08830 PF07683 Cobalamin synthesis protein cobW C-terminal domain JW907_08830 PF02492 CobW/HypB/UreG, nucleotide-binding domain JW907_08855 PF00211 Adenylate and Guanylate cyclase catalytic domain JW907_08875 PF01590 GAF domain JW907_08875 PF00158 Sigma-54 interaction domain JW907_08875 PF02954 Bacterial regulatory protein, Fis family JW907_08880 PF00009 Elongation factor Tu GTP binding domain JW907_08880 PF14492 Elongation Factor G, domain II JW907_08880 PF00679 Elongation factor G C-terminus JW907_08880 PF03144 Elongation factor Tu domain 2 JW907_08890 PF03109 ABC1 family JW907_08895 PF00085 Thioredoxin JW907_08900 PF04286 Protein of unknown function (DUF445) JW907_08910 PF01494 FAD binding domain JW907_08920 PF05684 Protein of unknown function (DUF819) JW907_08935 PF01678 Diaminopimelate epimerase JW907_08945 PF01969 Protein of unknown function DUF111 JW907_08975 PF00111 2Fe-2S iron-sulfur cluster binding domain JW907_08985 PF03793 PASTA domain JW907_08985 PF00069 Protein kinase domain JW907_08990 PF04434 SWIM zinc finger JW907_09005 PF02578 Multi-copper polyphenol oxidoreductase laccase JW907_09015 PF05996 Ferredoxin-dependent bilin reductase JW907_09020 PF13249 Squalene-hopene cyclase N-terminal domain JW907_09020 PF13243 Squalene-hopene cyclase C-terminal domain JW907_09025 PF01435 Peptidase family M48 JW907_09025 PF13181 Tetratricopeptide repeat JW907_09030 PF00291 Pyridoxal-phosphate dependent enzyme JW907_09030 PF00571 CBS domain JW907_09040 PF01555 DNA methylase JW907_09045 PF00156 Phosphoribosyl transferase domain JW907_09050 PF02151 UvrB/uvrC motif JW907_09050 PF00271 Helicase conserved C-terminal domain JW907_09050 PF04851 Type III restriction enzyme, res subunit JW907_09050 PF12344 Ultra-violet resistance protein B JW907_09050 PF17757 UvrB interaction domain JW907_09055 PF00502 Phycobilisome protein JW907_09060 PF02542 YgbB family JW907_09070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JW907_09070 PF03466 LysR substrate binding domain JW907_09085 PF02350 UDP-N-acetylglucosamine 2-epimerase JW907_09090 PF02577 Bifunctional nuclease JW907_09125 PF03793 PASTA domain JW907_09125 PF03717 Penicillin-binding Protein dimerisation domain JW907_09125 PF00905 Penicillin binding protein transpeptidase domain JW907_09135 PF01795 MraW methylase family JW907_09160 PF02811 PHP domain JW907_09160 PF14579 Helix-hairpin-helix motif JW907_09160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW907_09160 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW907_09160 PF01336 OB-fold nucleic acid binding domain JW907_09165 PF00266 Aminotransferase class-V JW907_09175 PF00561 alpha/beta hydrolase fold JW907_09190 PF00005 ABC transporter JW907_09195 PF01297 Zinc-uptake complex component A periplasmic JW907_09200 PF01084 Ribosomal protein S18 JW907_09205 PF00471 Ribosomal protein L33 JW907_09215 PF05670 NFACT protein RNA binding domain JW907_09225 PF02811 PHP domain JW907_09225 PF14579 Helix-hairpin-helix motif JW907_09225 PF07733 Bacterial DNA polymerase III alpha NTPase domain JW907_09225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JW907_09225 PF01336 OB-fold nucleic acid binding domain JW907_09230 PF02223 Thymidylate kinase JW907_09240 PF05690 Thiazole biosynthesis protein ThiG JW907_09240 PF01266 FAD dependent oxidoreductase JW907_09245 PF05151 Photosystem II reaction centre M protein (PsbM) JW907_09250 PF00465 Iron-containing alcohol dehydrogenase JW907_09255 PF00155 Aminotransferase class I and II JW907_09260 PF02705 K+ potassium transporter JW907_09270 PF01741 Large-conductance mechanosensitive channel, MscL JW907_09275 PF00575 S1 RNA binding domain JW907_09280 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JW907_09290 PF01063 Amino-transferase class IV JW907_09300 PF06055 Exopolysaccharide synthesis, ExoD JW907_09310 PF00343 Carbohydrate phosphorylase JW907_09320 PF17863 AAA lid domain JW907_09320 PF07726 ATPase family associated with various cellular activities (AAA) JW907_09350 PF00085 Thioredoxin JW907_09360 PF00154 recA bacterial DNA recombination protein JW907_09365 PF00583 Acetyltransferase (GNAT) family JW907_09380 PF01979 Amidohydrolase family JW907_09385 PF00037 4Fe-4S binding domain JW907_09410 PF08264 Anticodon-binding domain of tRNA JW907_09410 PF00133 tRNA synthetases class I (I, L, M and V) JW907_09410 PF13603 Leucyl-tRNA synthetase, Domain 2 JW907_09415 PF00072 Response regulator receiver domain JW907_09415 PF00486 Transcriptional regulatory protein, C terminal JW907_09440 PF00155 Aminotransferase class I and II JW907_09450 PF09194 Restriction endonuclease BsobI JW907_09460 PF02272 DHHA1 domain JW907_09460 PF01411 tRNA synthetases class II (A) JW907_09460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JW907_09465 PF01478 Type IV leader peptidase family JW907_09465 PF06750 Bacterial Peptidase A24 N-terminal domain JW907_09475 PF01590 GAF domain JW907_09475 PF00360 Phytochrome region JW907_09475 PF00563 EAL domain JW907_09475 PF00990 Diguanylate cyclase, GGDEF domain JW907_09495 PF00202 Aminotransferase class-III JW907_09505 PF07688 KaiA C-terminal domain JW907_09510 PF07689 KaiB domain JW907_09515 PF06745 KaiC JW907_09520 PF01513 ATP-NAD kinase JW907_09535 PF00111 2Fe-2S iron-sulfur cluster binding domain JW907_09550 PF01458 Uncharacterized protein family (UPF0051) JW907_09560 PF12697 Alpha/beta hydrolase family JW907_09565 PF03912 Psb28 protein JW907_09570 PF01220 Dehydroquinase class II JW907_09585 PF13545 Crp-like helix-turn-helix domain JW907_09585 PF00027 Cyclic nucleotide-binding domain JW907_09595 PF04539 Sigma-70 region 3 JW907_09595 PF04545 Sigma-70, region 4 JW907_09595 PF00140 Sigma-70 factor, region 1.2 JW907_09595 PF04542 Sigma-70 region 2 JW907_09600 PF00288 GHMP kinases N terminal domain JW907_09600 PF08544 GHMP kinases C terminal JW907_09605 PF00950 ABC 3 transport family JW907_09610 PF00814 Glycoprotease family JW907_09615 PF02082 Transcriptional regulator JW907_09620 PF00291 Pyridoxal-phosphate dependent enzyme JW907_09635 PF13614 AAA domain JW907_09640 PF00318 Ribosomal protein S2 JW907_09645 PF00889 Elongation factor TS JW907_09650 PF00677 Lumazine binding domain JW907_09655 PF00326 Prolyl oligopeptidase family JW907_09660 PF00156 Phosphoribosyl transferase domain JW907_09660 PF13537 Glutamine amidotransferase domain JW907_09665 PF00586 AIR synthase related protein, N-terminal domain JW907_09665 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JW907_09665 PF02769 AIR synthase related protein, C-terminal domain JW907_09670 PF00583 Acetyltransferase (GNAT) family JW907_09680 PF02541 Ppx/GppA phosphatase family JW907_09685 PF02653 Branched-chain amino acid transport system / permease component JW907_09690 PF01597 Glycine cleavage H-protein JW907_09700 PF01327 Polypeptide deformylase JW907_09720 PF00425 chorismate binding enzyme JW907_09720 PF04715 Anthranilate synthase component I, N terminal region JW907_09725 PF13545 Crp-like helix-turn-helix domain JW907_09755 PF00795 Carbon-nitrogen hydrolase JW907_09765 PF00072 Response regulator receiver domain JW907_09765 PF00990 Diguanylate cyclase, GGDEF domain JW907_09770 PF01565 FAD binding domain JW907_09775 PF13183 4Fe-4S dicluster domain JW907_09775 PF02754 Cysteine-rich domain JW907_09790 PF03109 ABC1 family JW907_09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_09795 PF00672 HAMP domain JW907_09795 PF13426 PAS domain JW907_09795 PF00512 His Kinase A (phospho-acceptor) domain JW907_09805 PF00459 Inositol monophosphatase family JW907_09810 PF00111 2Fe-2S iron-sulfur cluster binding domain JW907_09845 PF13545 Crp-like helix-turn-helix domain JW907_09845 PF00027 Cyclic nucleotide-binding domain JW907_09850 PF00005 ABC transporter JW907_09850 PF00664 ABC transporter transmembrane region JW907_09860 PF17820 PDZ domain JW907_09860 PF02163 Peptidase family M50 JW907_09865 PF03900 Porphobilinogen deaminase, C-terminal domain JW907_09865 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JW907_09880 PF17848 Acetyl-coA carboxylase zinc finger domain JW907_09880 PF01039 Carboxyl transferase domain JW907_09885 PF02163 Peptidase family M50 JW907_09885 PF13180 PDZ domain JW907_09890 PF00633 Helix-hairpin-helix motif JW907_09890 PF00730 HhH-GPD superfamily base excision DNA repair protein JW907_09900 PF16123 Hydroxyacylglutathione hydrolase C-terminus JW907_09900 PF00753 Metallo-beta-lactamase superfamily JW907_09915 PF00459 Inositol monophosphatase family JW907_09930 PF01098 Cell cycle protein JW907_09940 PF02130 Uncharacterized protein family UPF0054 JW907_09945 PF01219 Prokaryotic diacylglycerol kinase JW907_09950 PF06071 Protein of unknown function (DUF933) JW907_09950 PF01926 50S ribosome-binding GTPase JW907_09955 PF00120 Glutamine synthetase, catalytic domain JW907_09955 PF03951 Glutamine synthetase, beta-Grasp domain JW907_09965 PF13579 Glycosyl transferase 4-like domain JW907_09965 PF00534 Glycosyl transferases group 1 JW907_09970 PF13439 Glycosyltransferase Family 4 JW907_09980 PF00294 pfkB family carbohydrate kinase JW907_09980 PF01467 Cytidylyltransferase-like JW907_09985 PF16416 ARM-like repeat domain, GUN4-N terminal JW907_09985 PF05419 GUN4-like JW907_10005 PF00936 BMC domain JW907_10010 PF04055 Radical SAM superfamily JW907_10025 PF00180 Isocitrate/isopropylmalate dehydrogenase JW907_10035 PF00990 Diguanylate cyclase, GGDEF domain JW907_10035 PF00563 EAL domain JW907_10035 PF03707 Bacterial signalling protein N terminal repeat JW907_10045 PF03477 ATP cone domain JW907_10065 PF00072 Response regulator receiver domain JW907_10065 PF00196 Bacterial regulatory proteins, luxR family JW907_10070 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JW907_10070 PF01276 Orn/Lys/Arg decarboxylase, major domain JW907_10075 PF06949 Protein of unknown function (DUF1292) JW907_10090 PF02780 Transketolase, C-terminal domain JW907_10090 PF02779 Transketolase, pyrimidine binding domain JW907_10090 PF00456 Transketolase, thiamine diphosphate binding domain JW907_10095 PF00109 Beta-ketoacyl synthase, N-terminal domain JW907_10095 PF02801 Beta-ketoacyl synthase, C-terminal domain JW907_10100 PF00550 Phosphopantetheine attachment site JW907_10105 PF08206 Ribonuclease B OB domain JW907_10105 PF00773 RNB domain JW907_10105 PF00575 S1 RNA binding domain JW907_10105 PF17876 Cold shock domain JW907_10110 PF00551 Formyl transferase JW907_10110 PF02911 Formyl transferase, C-terminal domain JW907_10120 PF00004 ATPase family associated with various cellular activities (AAA) JW907_10120 PF01434 Peptidase family M41 JW907_10120 PF17862 AAA+ lid domain JW907_10130 PF01555 DNA methylase JW907_10145 PF03552 Cellulose synthase JW907_10145 PF00535 Glycosyl transferase family 2 JW907_10145 PF07238 PilZ domain JW907_10160 PF00005 ABC transporter JW907_10175 PF01546 Peptidase family M20/M25/M40 JW907_10175 PF07687 Peptidase dimerisation domain JW907_10180 PF01928 CYTH domain JW907_10185 PF03055 Retinal pigment epithelial membrane protein JW907_10190 PF03092 BT1 family JW907_10195 PF11910 Cyanobacterial and plant NDH-1 subunit O JW907_10200 PF01050 Mannose-6-phosphate isomerase JW907_10200 PF00483 Nucleotidyl transferase JW907_10205 PF02681 Divergent PAP2 family JW907_10210 PF00348 Polyprenyl synthetase JW907_10215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JW907_10215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JW907_10235 PF01475 Ferric uptake regulator family JW907_10255 PF07689 KaiB domain JW907_10255 PF00512 His Kinase A (phospho-acceptor) domain JW907_10255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_10265 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_10265 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JW907_10270 PF04485 Phycobilisome degradation protein nblA JW907_10285 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JW907_10285 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JW907_10290 PF02562 PhoH-like protein JW907_10295 PF01165 Ribosomal protein S21 JW907_10305 PF00886 Ribosomal protein S16 JW907_10310 PF00698 Acyl transferase domain JW907_10315 PF01553 Acyltransferase JW907_10315 PF13193 AMP-binding enzyme C-terminal domain JW907_10315 PF00501 AMP-binding enzyme JW907_10320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JW907_10320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JW907_10330 PF00361 Proton-conducting membrane transporter JW907_10335 PF17676 LD-carboxypeptidase C-terminal domain JW907_10335 PF02016 LD-carboxypeptidase N-terminal domain JW907_10345 PF01475 Ferric uptake regulator family JW907_10350 PF00905 Penicillin binding protein transpeptidase domain JW907_10350 PF00912 Transglycosylase JW907_10355 PF01479 S4 domain JW907_10355 PF00579 tRNA synthetases class I (W and Y) JW907_10365 PF00675 Insulinase (Peptidase family M16) JW907_10365 PF05193 Peptidase M16 inactive domain JW907_10390 PF00291 Pyridoxal-phosphate dependent enzyme JW907_10395 PF00152 tRNA synthetases class II (D, K and N) JW907_10395 PF01336 OB-fold nucleic acid binding domain JW907_10400 PF00488 MutS domain V JW907_10400 PF01713 Smr domain JW907_10420 PF08448 PAS fold JW907_10420 PF08447 PAS fold JW907_10420 PF00990 Diguanylate cyclase, GGDEF domain JW907_10420 PF00563 EAL domain JW907_10425 PF10742 Protein of unknown function (DUF2555) JW907_10430 PF04127 DNA / pantothenate metabolism flavoprotein JW907_10430 PF02441 Flavoprotein JW907_10435 PF08676 MutL C terminal dimerisation domain JW907_10435 PF01119 DNA mismatch repair protein, C-terminal domain JW907_10445 PF13326 Photosystem II Pbs27 JW907_10450 PF01427 D-ala-D-ala dipeptidase JW907_10455 PF00830 Ribosomal L28 family JW907_10475 PF13361 UvrD-like helicase C-terminal domain JW907_10475 PF00580 UvrD/REP helicase N-terminal domain JW907_10490 PF00378 Enoyl-CoA hydratase/isomerase JW907_10515 PF00004 ATPase family associated with various cellular activities (AAA) JW907_10515 PF10431 C-terminal, D2-small domain, of ClpB protein JW907_10515 PF02861 Clp amino terminal domain, pathogenicity island component JW907_10515 PF17871 AAA lid domain JW907_10515 PF07724 AAA domain (Cdc48 subfamily) JW907_10520 PF13614 AAA domain JW907_10530 PF02417 Chromate transporter JW907_10540 PF00072 Response regulator receiver domain JW907_10540 PF00486 Transcriptional regulatory protein, C terminal JW907_10550 PF00696 Amino acid kinase family JW907_10555 PF01765 Ribosome recycling factor JW907_10565 PF08486 Stage II sporulation protein JW907_10575 PF12804 MobA-like NTP transferase domain JW907_10575 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_10590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JW907_10600 PF00581 Rhodanese-like domain JW907_10605 PF16363 GDP-mannose 4,6 dehydratase JW907_10620 PF05685 Putative restriction endonuclease JW907_10625 PF00072 Response regulator receiver domain JW907_10625 PF12452 Protein of unknown function (DUF3685) JW907_10630 PF00395 S-layer homology domain JW907_10630 PF04966 Carbohydrate-selective porin, OprB family JW907_10635 PF00595 PDZ domain JW907_10635 PF03572 Peptidase family S41 JW907_10640 PF00551 Formyl transferase JW907_10650 PF00266 Aminotransferase class-V JW907_10660 PF03652 Holliday junction resolvase JW907_10665 PF06827 Zinc finger found in FPG and IleRS JW907_10665 PF00133 tRNA synthetases class I (I, L, M and V) JW907_10665 PF08264 Anticodon-binding domain of tRNA JW907_10670 PF01555 DNA methylase JW907_10690 PF00749 tRNA synthetases class I (E and Q), catalytic domain JW907_10700 PF05698 Bacterial trigger factor protein (TF) C-terminus JW907_10700 PF05697 Bacterial trigger factor protein (TF) JW907_10705 PF00574 Clp protease JW907_10710 PF10431 C-terminal, D2-small domain, of ClpB protein JW907_10710 PF06689 ClpX C4-type zinc finger JW907_10710 PF07724 AAA domain (Cdc48 subfamily) JW907_10715 PF00106 short chain dehydrogenase JW907_10730 PF01209 ubiE/COQ5 methyltransferase family JW907_10735 PF00582 Universal stress protein family JW907_10750 PF00834 Ribulose-phosphate 3 epimerase family JW907_10755 PF05690 Thiazole biosynthesis protein ThiG JW907_10755 PF01266 FAD dependent oxidoreductase JW907_10765 PF02769 AIR synthase related protein, C-terminal domain JW907_10765 PF00586 AIR synthase related protein, N-terminal domain JW907_10770 PF00502 Phycobilisome protein JW907_10770 PF00427 Phycobilisome Linker polypeptide JW907_10775 PF00486 Transcriptional regulatory protein, C terminal JW907_10775 PF00072 Response regulator receiver domain JW907_10800 PF14492 Elongation Factor G, domain II JW907_10800 PF03764 Elongation factor G, domain IV JW907_10800 PF00009 Elongation factor Tu GTP binding domain JW907_10800 PF00679 Elongation factor G C-terminus JW907_10805 PF00535 Glycosyl transferase family 2 JW907_10815 PF00155 Aminotransferase class I and II JW907_10825 PF00480 ROK family JW907_10830 PF03816 Cell envelope-related transcriptional attenuator domain JW907_10835 PF01926 50S ribosome-binding GTPase JW907_10835 PF01018 GTP1/OBG JW907_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_10845 PF00512 His Kinase A (phospho-acceptor) domain JW907_10845 PF00989 PAS fold JW907_10845 PF16736 Single Cache-like JW907_10850 PF03023 Lipid II flippase MurJ JW907_10855 PF00712 DNA polymerase III beta subunit, N-terminal domain JW907_10855 PF02768 DNA polymerase III beta subunit, C-terminal domain JW907_10855 PF02767 DNA polymerase III beta subunit, central domain JW907_10865 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family JW907_10870 PF17265 Family of unknown function (DUF5331) JW907_10875 PF00148 Nitrogenase component 1 type Oxidoreductase JW907_10880 PF00263 Bacterial type II and III secretion system protein JW907_10880 PF11741 AMIN domain JW907_10880 PF03958 Bacterial type II/III secretion system short domain JW907_10880 PF07660 Secretin and TonB N terminus short domain JW907_10900 PF17969 L,D-transpeptidase C-terminal domain JW907_10900 PF03734 L,D-transpeptidase catalytic domain JW907_10910 PF00871 Acetokinase family JW907_10920 PF00156 Phosphoribosyl transferase domain JW907_10925 PF00860 Permease family JW907_10955 PF02142 MGS-like domain JW907_10955 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JW907_10955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW907_10960 PF04025 Domain of unknown function (DUF370) JW907_11000 PF00005 ABC transporter JW907_11000 PF03459 TOBE domain JW907_11020 PF04012 PspA/IM30 family JW907_11030 PF00355 Rieske [2Fe-2S] domain JW907_11035 PF14870 Photosynthesis system II assembly factor YCF48 JW907_11040 PF00301 Rubredoxin JW907_11045 PF17746 SfsA N-terminal OB domain JW907_11045 PF03749 Sugar fermentation stimulation protein RE domain JW907_11055 PF09367 CpeS-like protein JW907_11060 PF10792 Protein of unknown function (DUF2605) JW907_11070 PF12631 MnmE helical domain JW907_11070 PF10396 GTP-binding protein TrmE N-terminus JW907_11070 PF01926 50S ribosome-binding GTPase JW907_11085 PF02527 rRNA small subunit methyltransferase G JW907_11095 PF00395 S-layer homology domain JW907_11095 PF04966 Carbohydrate-selective porin, OprB family JW907_11100 PF00633 Helix-hairpin-helix motif JW907_11100 PF04002 RadC-like JAB domain JW907_11105 PF03976 Polyphosphate kinase 2 (PPK2) JW907_11115 PF00171 Aldehyde dehydrogenase family JW907_11120 PF09366 Protein of unknown function (DUF1997) JW907_11125 PF00528 Binding-protein-dependent transport system inner membrane component JW907_11130 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JW907_11130 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JW907_11135 PF02885 Glycosyl transferase family, helical bundle domain JW907_11135 PF00591 Glycosyl transferase family, a/b domain JW907_11145 PF07685 CobB/CobQ-like glutamine amidotransferase domain JW907_11145 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JW907_11165 PF04055 Radical SAM superfamily JW907_11165 PF06969 HemN C-terminal domain JW907_11170 PF01126 Heme oxygenase JW907_11175 PF02915 Rubrerythrin JW907_11180 PF11378 Protein of unknown function (DUF3181) JW907_11185 PF00350 Dynamin family JW907_11190 PF00350 Dynamin family JW907_11205 PF02531 PsaD JW907_11210 PF12697 Alpha/beta hydrolase family JW907_11215 PF08241 Methyltransferase domain JW907_11220 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JW907_11220 PF00925 GTP cyclohydrolase II JW907_11240 PF06508 Queuosine biosynthesis protein QueC JW907_11245 PF00012 Hsp70 protein JW907_11260 PF00924 Mechanosensitive ion channel JW907_11260 PF12795 Mechanosensitive ion channel porin domain JW907_11260 PF12794 Mechanosensitive ion channel inner membrane domain 1 JW907_11265 PF02021 Uncharacterised protein family UPF0102 JW907_11270 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JW907_11270 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JW907_11270 PF01488 Shikimate / quinate 5-dehydrogenase JW907_11290 PF00155 Aminotransferase class I and II JW907_11295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JW907_11305 PF02789 Cytosol aminopeptidase family, N-terminal domain JW907_11305 PF00883 Cytosol aminopeptidase family, catalytic domain JW907_11315 PF04452 RNA methyltransferase JW907_11320 PF00164 Ribosomal protein S12/S23 JW907_11325 PF00177 Ribosomal protein S7p/S5e JW907_11330 PF03144 Elongation factor Tu domain 2 JW907_11330 PF14492 Elongation Factor G, domain II JW907_11330 PF00679 Elongation factor G C-terminus JW907_11330 PF00009 Elongation factor Tu GTP binding domain JW907_11330 PF03764 Elongation factor G, domain IV JW907_11335 PF03144 Elongation factor Tu domain 2 JW907_11335 PF00009 Elongation factor Tu GTP binding domain JW907_11335 PF03143 Elongation factor Tu C-terminal domain JW907_11340 PF00338 Ribosomal protein S10p/S20e JW907_11350 PF08459 UvrC Helix-hairpin-helix N-terminal JW907_11350 PF02151 UvrB/uvrC motif JW907_11350 PF12826 Helix-hairpin-helix motif JW907_11350 PF01541 GIY-YIG catalytic domain JW907_11370 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JW907_11375 PF13085 2Fe-2S iron-sulfur cluster binding domain JW907_11380 PF00762 Ferrochelatase JW907_11385 PF17912 MalK OB fold domain JW907_11385 PF03459 TOBE domain JW907_11385 PF00005 ABC transporter JW907_11390 PF00348 Polyprenyl synthetase JW907_11395 PF03816 Cell envelope-related transcriptional attenuator domain JW907_11400 PF00574 Clp protease JW907_11410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JW907_11410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JW907_11415 PF02457 DisA bacterial checkpoint controller nucleotide-binding JW907_11420 PF01255 Putative undecaprenyl diphosphate synthase JW907_11430 PF00288 GHMP kinases N terminal domain JW907_11430 PF08544 GHMP kinases C terminal JW907_11435 PF18578 Rubisco accumulation factor 1 alpha helical domain JW907_11435 PF18579 Rubisco accumulation factor 1 helix turn helix domain JW907_11435 PF18087 Rubisco Assembly chaperone C-terminal domain JW907_11440 PF02706 Chain length determinant protein JW907_11440 PF13614 AAA domain JW907_11440 PF13807 G-rich domain on putative tyrosine kinase JW907_11450 PF00005 ABC transporter JW907_11460 PF02219 Methylenetetrahydrofolate reductase JW907_11465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JW907_11465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JW907_11465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JW907_11465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JW907_11470 PF01467 Cytidylyltransferase-like JW907_11470 PF00294 pfkB family carbohydrate kinase JW907_11475 PF01520 N-acetylmuramoyl-L-alanine amidase JW907_11475 PF08239 Bacterial SH3 domain JW907_11490 PF03600 Citrate transporter JW907_11510 PF01699 Sodium/calcium exchanger protein JW907_11515 PF11283 Protein of unknown function (DUF3084) JW907_11525 PF01975 Survival protein SurE JW907_11545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JW907_11550 PF07977 FabA-like domain JW907_11555 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JW907_11555 PF00132 Bacterial transferase hexapeptide (six repeats) JW907_11560 PF00588 SpoU rRNA Methylase family JW907_11575 PF07238 PilZ domain JW907_11575 PF00535 Glycosyl transferase family 2 JW907_11575 PF03552 Cellulose synthase JW907_11580 PF07238 PilZ domain JW907_11580 PF00535 Glycosyl transferase family 2 JW907_11580 PF03552 Cellulose synthase JW907_11590 PF01725 Ham1 family JW907_11600 PF05685 Putative restriction endonuclease JW907_11605 PF09383 NIL domain JW907_11605 PF00005 ABC transporter JW907_11615 PF09587 Bacterial capsule synthesis protein PGA_cap JW907_11620 PF00571 CBS domain JW907_11620 PF01380 SIS domain JW907_11630 PF01343 Peptidase family S49 JW907_11645 PF17810 Arginine decarboxylase helical bundle domain JW907_11645 PF17944 Arginine decarboxylase C-terminal helical extension JW907_11645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JW907_11650 PF02785 Biotin carboxylase C-terminal domain JW907_11650 PF00289 Biotin carboxylase, N-terminal domain JW907_11650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JW907_11655 PF04101 Glycosyltransferase family 28 C-terminal domain JW907_11655 PF03033 Glycosyltransferase family 28 N-terminal domain JW907_11660 PF01451 Low molecular weight phosphotyrosine protein phosphatase JW907_11665 PF02769 AIR synthase related protein, C-terminal domain JW907_11665 PF00586 AIR synthase related protein, N-terminal domain JW907_11680 PF01594 AI-2E family transporter JW907_11690 PF00654 Voltage gated chloride channel JW907_11695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW907_11700 PF01300 Telomere recombination JW907_11710 PF07884 Vitamin K epoxide reductase family JW907_11720 PF03209 PUCC protein JW907_11725 PF07690 Major Facilitator Superfamily JW907_11735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JW907_11750 PF00475 Imidazoleglycerol-phosphate dehydratase JW907_11755 PF01556 DnaJ C terminal domain JW907_11755 PF00226 DnaJ domain JW907_11755 PF00684 DnaJ central domain JW907_11760 PF00004 ATPase family associated with various cellular activities (AAA) JW907_11760 PF06480 FtsH Extracellular JW907_11760 PF01434 Peptidase family M41 JW907_11760 PF17862 AAA+ lid domain JW907_11770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JW907_11770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JW907_11770 PF16582 Middle domain of thiamine pyrophosphate JW907_11780 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system JW907_11795 PF00111 2Fe-2S iron-sulfur cluster binding domain JW907_11800 PF01380 SIS domain JW907_11810 PF02875 Mur ligase family, glutamate ligase domain JW907_11810 PF08245 Mur ligase middle domain JW907_11810 PF01225 Mur ligase family, catalytic domain JW907_11820 PF02540 NAD synthase JW907_11825 PF05969 Photosystem II complex subunit Ycf12 JW907_11830 PF01368 DHH family JW907_11830 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JW907_11830 PF17768 RecJ OB domain JW907_11830 PF02272 DHHA1 domain JW907_11835 PF04966 Carbohydrate-selective porin, OprB family JW907_11835 PF00395 S-layer homology domain JW907_11840 PF02492 CobW/HypB/UreG, nucleotide-binding domain JW907_11840 PF07683 Cobalamin synthesis protein cobW C-terminal domain JW907_11850 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JW907_11850 PF01189 16S rRNA methyltransferase RsmB/F JW907_11850 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JW907_11860 PF11897 Protein of unknown function (DUF3417) JW907_11860 PF00343 Carbohydrate phosphorylase JW907_11875 PF00873 AcrB/AcrD/AcrF family JW907_11890 PF00486 Transcriptional regulatory protein, C terminal JW907_11890 PF00072 Response regulator receiver domain JW907_11900 PF00498 FHA domain JW907_11900 PF00005 ABC transporter JW907_11900 PF01061 ABC-2 type transporter JW907_11910 PF13607 Succinyl-CoA ligase like flavodoxin domain JW907_11910 PF13380 CoA binding domain JW907_11910 PF00583 Acetyltransferase (GNAT) family JW907_11915 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JW907_11915 PF02222 ATP-grasp domain JW907_11930 PF00528 Binding-protein-dependent transport system inner membrane component JW907_11935 PF00436 Single-strand binding protein family JW907_11940 PF00905 Penicillin binding protein transpeptidase domain JW907_11940 PF00912 Transglycosylase JW907_11940 PF17092 Penicillin-binding protein OB-like domain JW907_11945 PF08402 TOBE domain JW907_11945 PF00005 ABC transporter JW907_11960 PF02685 Glucokinase JW907_11965 PF01259 SAICAR synthetase JW907_11975 PF00400 WD domain, G-beta repeat JW907_11980 PF10674 Protein of unknown function (DUF2488) JW907_12005 PF10458 Valyl tRNA synthetase tRNA binding arm JW907_12005 PF00133 tRNA synthetases class I (I, L, M and V) JW907_12005 PF08264 Anticodon-binding domain of tRNA JW907_12010 PF00101 Ribulose bisphosphate carboxylase, small chain JW907_12015 PF02341 RbcX protein JW907_12020 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JW907_12020 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JW907_12025 PF01926 50S ribosome-binding GTPase JW907_12035 PF01078 Magnesium chelatase, subunit ChlI JW907_12035 PF17863 AAA lid domain JW907_12045 PF05175 Methyltransferase small domain JW907_12050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JW907_12055 PF04055 Radical SAM superfamily JW907_12065 PF02941 Ferredoxin thioredoxin reductase variable alpha chain JW907_12075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JW907_12075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JW907_12080 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JW907_12080 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JW907_12080 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JW907_12080 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JW907_12090 PF00809 Pterin binding enzyme JW907_12110 PF02686 Glu-tRNAGln amidotransferase C subunit JW907_12115 PF13176 Tetratricopeptide repeat JW907_12115 PF00515 Tetratricopeptide repeat JW907_12120 PF00582 Universal stress protein family JW907_12140 PF00421 Photosystem II protein JW907_12145 PF01405 Photosystem II reaction centre T protein JW907_12150 PF00300 Histidine phosphatase superfamily (branch 1) JW907_12160 PF10415 Fumarase C C-terminus JW907_12160 PF00206 Lyase JW907_12185 PF00117 Glutamine amidotransferase class-I JW907_12225 PF00361 Proton-conducting membrane transporter JW907_12235 PF00361 Proton-conducting membrane transporter JW907_12245 PF03881 Fructosamine kinase JW907_12250 PF10502 Signal peptidase, peptidase S26 JW907_12255 PF17806 Sarcosine oxidase A3 domain JW907_12255 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW907_12255 PF08669 Glycine cleavage T-protein C-terminal barrel domain JW907_12255 PF01571 Aminomethyltransferase folate-binding domain JW907_12260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JW907_12260 PF00205 Thiamine pyrophosphate enzyme, central domain JW907_12260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JW907_12265 PF01329 Pterin 4 alpha carbinolamine dehydratase JW907_12270 PF00253 Ribosomal protein S14p/S29e JW907_12275 PF09190 DALR domain JW907_12275 PF01406 tRNA synthetases class I (C) catalytic domain JW907_12285 PF10397 Adenylosuccinate lyase C-terminus JW907_12285 PF00206 Lyase JW907_12295 PF00498 FHA domain JW907_12295 PF00990 Diguanylate cyclase, GGDEF domain JW907_12295 PF00563 EAL domain JW907_12300 PF01434 Peptidase family M41 JW907_12300 PF06480 FtsH Extracellular JW907_12300 PF00004 ATPase family associated with various cellular activities (AAA) JW907_12300 PF17862 AAA+ lid domain JW907_12305 PF01842 ACT domain JW907_12305 PF13840 ACT domain JW907_12305 PF00696 Amino acid kinase family JW907_12310 PF00892 EamA-like transporter family JW907_12320 PF05175 Methyltransferase small domain JW907_12350 PF04480 Protein of unknown function (DUF559) JW907_12355 PF00436 Single-strand binding protein family JW907_12360 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW907_12375 PF00425 chorismate binding enzyme JW907_12375 PF04715 Anthranilate synthase component I, N terminal region JW907_12380 PF02361 Cobalt transport protein JW907_12385 PF04012 PspA/IM30 family JW907_12395 PF00155 Aminotransferase class I and II JW907_12400 PF01556 DnaJ C terminal domain JW907_12400 PF00226 DnaJ domain JW907_12405 PF02548 Ketopantoate hydroxymethyltransferase JW907_12415 PF03447 Homoserine dehydrogenase, NAD binding domain JW907_12415 PF00742 Homoserine dehydrogenase JW907_12415 PF01842 ACT domain JW907_12420 PF00528 Binding-protein-dependent transport system inner membrane component JW907_12425 PF00528 Binding-protein-dependent transport system inner membrane component JW907_12440 PF02514 CobN/Magnesium Chelatase JW907_12440 PF11965 Domain of unknown function (DUF3479) JW907_12445 PF00005 ABC transporter JW907_12455 PF05050 Methyltransferase FkbM domain JW907_12460 PF03741 Integral membrane protein TerC family JW907_12465 PF00334 Nucleoside diphosphate kinase JW907_12470 PF02567 Phenazine biosynthesis-like protein JW907_12475 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JW907_12475 PF12557 Cob(I)alamin adenosyltransferase N terminal JW907_12480 PF04542 Sigma-70 region 2 JW907_12480 PF00140 Sigma-70 factor, region 1.2 JW907_12480 PF04545 Sigma-70, region 4 JW907_12480 PF04539 Sigma-70 region 3 JW907_12485 PF15975 Flotillin JW907_12485 PF01145 SPFH domain / Band 7 family JW907_12495 PF02224 Cytidylate kinase JW907_12495 PF02569 Pantoate-beta-alanine ligase JW907_12510 PF07687 Peptidase dimerisation domain JW907_12510 PF01546 Peptidase family M20/M25/M40 JW907_12515 PF00072 Response regulator receiver domain JW907_12525 PF02463 RecF/RecN/SMC N terminal domain JW907_12535 PF04472 Cell division protein SepF JW907_12540 PF01891 Cobalt uptake substrate-specific transmembrane region JW907_12545 PF02553 Cobalt transport protein component CbiN JW907_12555 PF00005 ABC transporter JW907_12560 PF00072 Response regulator receiver domain JW907_12570 PF13180 PDZ domain JW907_12575 PF02153 Prephenate dehydrogenase JW907_12590 PF00069 Protein kinase domain JW907_12600 PF00805 Pentapeptide repeats (8 copies) JW907_12600 PF00069 Protein kinase domain JW907_12610 PF11909 NADH-quinone oxidoreductase cyanobacterial subunit N JW907_12620 PF12169 DNA polymerase III subunits gamma and tau domain III JW907_12630 PF11264 Thylakoid formation protein JW907_12640 PF07992 Pyridine nucleotide-disulphide oxidoreductase JW907_12645 PF02075 Crossover junction endodeoxyribonuclease RuvC JW907_12665 PF01914 MarC family integral membrane protein JW907_12675 PF00152 tRNA synthetases class II (D, K and N) JW907_12675 PF02938 GAD domain JW907_12675 PF01336 OB-fold nucleic acid binding domain JW907_12685 PF00924 Mechanosensitive ion channel JW907_12695 PF00936 BMC domain JW907_12700 PF03309 Type III pantothenate kinase JW907_12710 PF12911 N-terminal TM domain of oligopeptide transport permease C JW907_12710 PF00528 Binding-protein-dependent transport system inner membrane component JW907_12715 PF00486 Transcriptional regulatory protein, C terminal JW907_12715 PF00072 Response regulator receiver domain JW907_12725 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JW907_12725 PF12706 Beta-lactamase superfamily domain JW907_12740 PF12697 Alpha/beta hydrolase family JW907_12745 PF00990 Diguanylate cyclase, GGDEF domain JW907_12750 PF00873 AcrB/AcrD/AcrF family JW907_12755 PF00005 ABC transporter JW907_12760 PF12773 Double zinc ribbon JW907_12760 PF00498 FHA domain JW907_12765 PF00069 Protein kinase domain JW907_12795 PF13614 AAA domain JW907_12810 PF02895 Signal transducing histidine kinase, homodimeric domain JW907_12810 PF00072 Response regulator receiver domain JW907_12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JW907_12810 PF01584 CheW-like domain JW907_12810 PF01627 Hpt domain JW907_12815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JW907_12815 PF01590 GAF domain JW907_12825 PF00072 Response regulator receiver domain JW907_12830 PF14332 Domain of unknown function (DUF4388) JW907_12830 PF00072 Response regulator receiver domain JW907_12855 PF00395 S-layer homology domain JW907_12855 PF04966 Carbohydrate-selective porin, OprB family JW907_12865 PF04055 Radical SAM superfamily JW907_12870 PF00106 short chain dehydrogenase JW907_12880 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JW907_12880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JW907_12885 PF00005 ABC transporter JW907_12885 PF00664 ABC transporter transmembrane region JW907_12890 PF00128 Alpha amylase, catalytic domain JW907_12890 PF02806 Alpha amylase, C-terminal all-beta domain JW907_12890 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JW907_12895 PF01180 Dihydroorotate dehydrogenase JW907_12905 PF00005 ABC transporter JW907_12910 PF00862 Sucrose synthase JW907_12910 PF00534 Glycosyl transferases group 1 JW907_12920 PF00069 Protein kinase domain JW907_12925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JW907_12925 PF02896 PEP-utilising enzyme, TIM barrel domain JW907_12925 PF00391 PEP-utilising enzyme, mobile domain JW907_12930 PF02824 TGS domain JW907_12930 PF13291 ACT domain JW907_12930 PF04607 Region found in RelA / SpoT proteins JW907_12940 PF00731 AIR carboxylase JW907_12945 PF08331 Domain of unknown function (DUF1730) JW907_12950 PF07884 Vitamin K epoxide reductase family JW907_12955 PF00072 Response regulator receiver domain JW907_12955 PF00486 Transcriptional regulatory protein, C terminal JW907_12965 PF08501 Shikimate dehydrogenase substrate binding domain JW907_12965 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JW907_12970 PF00543 Nitrogen regulatory protein P-II JW907_12975 PF03725 3' exoribonuclease family, domain 2 JW907_12975 PF01138 3' exoribonuclease family, domain 1 JW907_12985 PF13335 Magnesium chelatase, subunit ChlI C-terminal JW907_12985 PF01078 Magnesium chelatase, subunit ChlI JW907_12995 PF04055 Radical SAM superfamily JW907_12995 PF06463 Molybdenum Cofactor Synthesis C JW907_13000 PF10150 Ribonuclease E/G family JW907_13005 PF04960 Glutaminase JW907_13015 PF02096 60Kd inner membrane protein JW907_13020 PF00825 Ribonuclease P JW907_13025 PF00468 Ribosomal protein L34