locus-tag class description THEMA_00005 PF00308 Bacterial dnaA protein THEMA_00005 PF11638 DnaA N-terminal domain THEMA_00005 PF08299 Bacterial dnaA protein helix-turn-helix THEMA_00010 PF02390 Putative methyltransferase THEMA_00025 PF03853 YjeF-related protein N-terminus THEMA_00025 PF01256 Carbohydrate kinase THEMA_00035 PF00465 Iron-containing alcohol dehydrogenase THEMA_00045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_00050 PF01384 Phosphate transporter family THEMA_00060 PF01351 Ribonuclease HII THEMA_00065 PF01865 Protein of unknown function DUF47 THEMA_00070 PF03819 MazG nucleotide pyrophosphohydrolase domain THEMA_00075 PF13145 PPIC-type PPIASE domain THEMA_00080 PF01008 Initiation factor 2 subunit family THEMA_00085 PF01311 Bacterial export proteins, family 1 THEMA_00090 PF01312 FlhB HrpN YscU SpaS Family THEMA_00095 PF00771 FHIPEP family THEMA_00100 PF00448 SRP54-type protein, GTPase domain THEMA_00105 PF10609 NUBPL iron-transfer P-loop NTPase THEMA_00115 PF04509 CheC-like family THEMA_00120 PF03975 CheD chemotactic sensory transduction THEMA_00125 PF04545 Sigma-70, region 4 THEMA_00125 PF04542 Sigma-70 region 2 THEMA_00125 PF04539 Sigma-70 region 3 THEMA_00150 PF04232 Stage V sporulation protein S (SpoVS) THEMA_00155 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain THEMA_00155 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain THEMA_00160 PF08323 Starch synthase catalytic domain THEMA_00160 PF00534 Glycosyl transferases group 1 THEMA_00170 PF02673 Bacitracin resistance protein BacA THEMA_00175 PF03448 MgtE intracellular N domain THEMA_00175 PF00571 CBS domain THEMA_00175 PF01769 Divalent cation transporter THEMA_00180 PF04551 GcpE protein THEMA_00185 PF17820 PDZ domain THEMA_00185 PF02163 Peptidase family M50 THEMA_00190 PF13288 DXP reductoisomerase C-terminal domain THEMA_00190 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase THEMA_00190 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain THEMA_00200 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain THEMA_00200 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain THEMA_00205 PF00912 Transglycosylase THEMA_00205 PF00905 Penicillin binding protein transpeptidase domain THEMA_00220 PF03309 Type III pantothenate kinase THEMA_00225 PF01053 Cys/Met metabolism PLP-dependent enzyme THEMA_00230 PF04204 Homoserine O-succinyltransferase THEMA_00235 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit THEMA_00245 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THEMA_00245 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THEMA_00245 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THEMA_00250 PF00113 Enolase, C-terminal TIM barrel domain THEMA_00250 PF03952 Enolase, N-terminal domain THEMA_00255 PF16916 Dimerisation domain of Zinc Transporter THEMA_00255 PF01545 Cation efflux family THEMA_00265 PF00814 Glycoprotease family THEMA_00270 PF02861 Clp amino terminal domain, pathogenicity island component THEMA_00270 PF17871 AAA lid domain THEMA_00270 PF07724 AAA domain (Cdc48 subfamily) THEMA_00270 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_00270 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_00275 PF01795 MraW methylase family THEMA_00285 PF03793 PASTA domain THEMA_00285 PF03717 Penicillin-binding Protein dimerisation domain THEMA_00285 PF00905 Penicillin binding protein transpeptidase domain THEMA_00290 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_00295 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_00295 PF13192 Thioredoxin domain THEMA_00305 PF01145 SPFH domain / Band 7 family THEMA_00315 PF12706 Beta-lactamase superfamily domain THEMA_00315 PF00753 Metallo-beta-lactamase superfamily THEMA_00320 PF01281 Ribosomal protein L9, N-terminal domain THEMA_00320 PF03948 Ribosomal protein L9, C-terminal domain THEMA_00325 PF00483 Nucleotidyl transferase THEMA_00330 PF07549 SecD/SecF GG Motif THEMA_00330 PF02355 Protein export membrane protein THEMA_00335 PF07549 SecD/SecF GG Motif THEMA_00335 PF02355 Protein export membrane protein THEMA_00340 PF02699 Preprotein translocase subunit THEMA_00350 PF06574 FAD synthetase THEMA_00350 PF01687 Riboflavin kinase THEMA_00355 PF16198 tRNA pseudouridylate synthase B C-terminal domain THEMA_00355 PF01472 PUA domain THEMA_00355 PF01509 TruB family pseudouridylate synthase (N terminal domain) THEMA_00360 PF02033 Ribosome-binding factor A THEMA_00365 PF08668 HDOD domain THEMA_00370 PF13426 PAS domain THEMA_00370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_00370 PF14827 Double sensory domain of two-component sensor kinase THEMA_00370 PF00512 His Kinase A (phospho-acceptor) domain THEMA_00370 PF00672 HAMP domain THEMA_00375 PF03481 Putative GTP-binding controlling metal-binding THEMA_00375 PF01300 Telomere recombination THEMA_00385 PF01628 HrcA protein C terminal domain THEMA_00390 PF01025 GrpE THEMA_00395 PF00226 DnaJ domain THEMA_00395 PF00684 DnaJ central domain THEMA_00395 PF01556 DnaJ C terminal domain THEMA_00400 PF01926 50S ribosome-binding GTPase THEMA_00405 PF07650 KH domain THEMA_00405 PF01926 50S ribosome-binding GTPase THEMA_00410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THEMA_00415 PF03471 Transporter associated domain THEMA_00415 PF00571 CBS domain THEMA_00420 PF02590 Predicted SPOUT methyltransferase THEMA_00425 PF07837 Formiminotransferase domain, N-terminal subdomain THEMA_00425 PF02971 Formiminotransferase domain THEMA_00430 PF00072 Response regulator receiver domain THEMA_00445 PF01098 Cell cycle protein THEMA_00455 PF00437 Type II/IV secretion system protein THEMA_00460 PF12327 FtsZ family, C-terminal domain THEMA_00460 PF00091 Tubulin/FtsZ family, GTPase domain THEMA_00465 PF11983 Membrane-attachment and polymerisation-promoting switch THEMA_00465 PF02491 SHS2 domain inserted in FTSA THEMA_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_00475 PF01751 Toprim domain THEMA_00475 PF00204 DNA gyrase B THEMA_00475 PF00986 DNA gyrase B subunit, carboxyl terminus THEMA_00485 PF01063 Amino-transferase class IV THEMA_00490 PF04055 Radical SAM superfamily THEMA_00490 PF00919 Uncharacterized protein family UPF0004 THEMA_00500 PF00294 pfkB family carbohydrate kinase THEMA_00505 PF00005 ABC transporter THEMA_00505 PF08402 TOBE domain THEMA_00515 PF04055 Radical SAM superfamily THEMA_00515 PF06463 Molybdenum Cofactor Synthesis C THEMA_00525 PF18665 Tetracyclin repressor-like, C-terminal domain THEMA_00525 PF00440 Bacterial regulatory proteins, tetR family THEMA_00530 PF03483 B3/4 domain THEMA_00530 PF03147 Ferredoxin-fold anticodon binding domain THEMA_00530 PF03484 tRNA synthetase B5 domain THEMA_00530 PF01588 Putative tRNA binding domain THEMA_00530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain THEMA_00535 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain THEMA_00535 PF01409 tRNA synthetases class II core domain (F) THEMA_00545 PF00465 Iron-containing alcohol dehydrogenase THEMA_00550 PF00860 Permease family THEMA_00555 PF03808 Glycosyl transferase WecB/TagA/CpsF family THEMA_00575 PF01554 MatE THEMA_00580 PF01979 Amidohydrolase family THEMA_00585 PF01380 SIS domain THEMA_00590 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_00595 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_00600 PF01547 Bacterial extracellular solute-binding protein THEMA_00605 PF00933 Glycosyl hydrolase family 3 N terminal domain THEMA_00610 PF00480 ROK family THEMA_00615 PF10417 C-terminal domain of 1-Cys peroxiredoxin THEMA_00615 PF00578 AhpC/TSA family THEMA_00625 PF00953 Glycosyl transferase family 4 THEMA_00630 PF02811 PHP domain THEMA_00635 PF06418 CTP synthase N-terminus THEMA_00635 PF00117 Glutamine amidotransferase class-I THEMA_00640 PF00109 Beta-ketoacyl synthase, N-terminal domain THEMA_00640 PF02801 Beta-ketoacyl synthase, C-terminal domain THEMA_00645 PF07977 FabA-like domain THEMA_00650 PF03060 Nitronate monooxygenase THEMA_00655 PF02632 BioY family THEMA_00660 PF00698 Acyl transferase domain THEMA_00665 PF04029 2-phosphosulpholactate phosphatase THEMA_00685 PF00005 ABC transporter THEMA_00690 PF02592 Putative vitamin uptake transporter THEMA_00695 PF14489 QueF-like protein THEMA_00700 PF08543 Phosphomethylpyrimidine kinase THEMA_00700 PF10120 Thiamine-phosphate synthase THEMA_00710 PF01964 Radical SAM ThiC family THEMA_00725 PF04454 Encapsulating protein for peroxidase THEMA_00750 PF00578 AhpC/TSA family THEMA_00775 PF04760 Translation initiation factor IF-2, N-terminal region THEMA_00775 PF11987 Translation-initiation factor 2 THEMA_00775 PF00009 Elongation factor Tu GTP binding domain THEMA_00785 PF11146 Protein of unknown function (DUF2905) THEMA_00790 PF04468 PSP1 C-terminal conserved region THEMA_00795 PF09115 DNA polymerase III, delta subunit, C terminal THEMA_00800 PF00919 Uncharacterized protein family UPF0004 THEMA_00800 PF18693 TRAM domain THEMA_00800 PF04055 Radical SAM superfamily THEMA_00805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEMA_00805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEMA_00805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEMA_00805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEMA_00810 PF01926 50S ribosome-binding GTPase THEMA_00815 PF00128 Alpha amylase, catalytic domain THEMA_00815 PF02806 Alpha amylase, C-terminal all-beta domain THEMA_00815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THEMA_00820 PF00392 Bacterial regulatory proteins, gntR family THEMA_00820 PF07702 UTRA domain THEMA_00825 PF00005 ABC transporter THEMA_00835 PF01906 Putative heavy-metal-binding THEMA_00840 PF00318 Ribosomal protein S2 THEMA_00860 PF00700 Bacterial flagellin C-terminal helical region THEMA_00860 PF00669 Bacterial flagellin N-terminal helical region THEMA_00865 PF00535 Glycosyl transferase family 2 THEMA_00865 PF13181 Tetratricopeptide repeat THEMA_00870 PF00535 Glycosyl transferase family 2 THEMA_00875 PF00753 Metallo-beta-lactamase superfamily THEMA_00875 PF00258 Flavodoxin THEMA_00880 PF18267 Rubredoxin NAD+ reductase C-terminal domain THEMA_00880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain THEMA_00880 PF04324 BFD-like [2Fe-2S] binding domain THEMA_00880 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_00885 PF01209 ubiE/COQ5 methyltransferase family THEMA_00890 PF02056 Family 4 glycosyl hydrolase THEMA_00890 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_00900 PF00485 Phosphoribulokinase / Uridine kinase family THEMA_00920 PF13180 PDZ domain THEMA_00920 PF03572 Peptidase family S41 THEMA_00935 PF00534 Glycosyl transferases group 1 THEMA_00935 PF13439 Glycosyltransferase Family 4 THEMA_00945 PF00149 Calcineurin-like phosphoesterase THEMA_00950 PF01467 Cytidylyltransferase-like THEMA_00955 PF03129 Anticodon binding domain THEMA_00955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEMA_00955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEMA_00955 PF02824 TGS domain THEMA_00960 PF01966 HD domain THEMA_00975 PF01238 Phosphomannose isomerase type I THEMA_00985 PF01134 Glucose inhibited division protein A THEMA_01000 PF02677 Epoxyqueuosine reductase QueH THEMA_01005 PF02580 D-Tyr-tRNA(Tyr) deacylase THEMA_01010 PF02824 TGS domain THEMA_01010 PF04607 Region found in RelA / SpoT proteins THEMA_01010 PF13291 ACT domain THEMA_01025 PF01523 Putative modulator of DNA gyrase THEMA_01030 PF01523 Putative modulator of DNA gyrase THEMA_01040 PF01699 Sodium/calcium exchanger protein THEMA_01050 PF17876 Cold shock domain THEMA_01050 PF08206 Ribonuclease B OB domain THEMA_01050 PF00575 S1 RNA binding domain THEMA_01050 PF00773 RNB domain THEMA_01060 PF00464 Serine hydroxymethyltransferase THEMA_01065 PF01406 tRNA synthetases class I (C) catalytic domain THEMA_01065 PF09190 DALR domain THEMA_01070 PF01584 CheW-like domain THEMA_01075 PF00364 Biotin-requiring enzyme THEMA_01085 PF01039 Carboxyl transferase domain THEMA_01090 PF12627 Probable RNA and SrmB- binding site of polymerase A THEMA_01090 PF01368 DHH family THEMA_01090 PF00571 CBS domain THEMA_01090 PF02272 DHHA1 domain THEMA_01090 PF01743 Poly A polymerase head domain THEMA_01120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases THEMA_01125 PF03099 Biotin/lipoate A/B protein ligase family THEMA_01130 PF02527 rRNA small subunit methyltransferase G THEMA_01140 PF00005 ABC transporter THEMA_01150 PF18146 Damage-inducible protein CinA KH domain THEMA_01150 PF00994 Probable molybdopterin binding domain THEMA_01150 PF02464 Competence-damaged protein THEMA_01155 PF07194 P2 response regulator binding domain THEMA_01155 PF01627 Hpt domain THEMA_01155 PF01584 CheW-like domain THEMA_01155 PF02895 Signal transducing histidine kinase, homodimeric domain THEMA_01155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_01160 PF01584 CheW-like domain THEMA_01165 PF00072 Response regulator receiver domain THEMA_01175 PF00813 FliP family THEMA_01190 PF00574 Clp protease THEMA_01195 PF05697 Bacterial trigger factor protein (TF) THEMA_01195 PF05698 Bacterial trigger factor protein (TF) C-terminus THEMA_01205 PF01648 4'-phosphopantetheinyl transferase superfamily THEMA_01220 PF00162 Phosphoglycerate kinase THEMA_01220 PF00121 Triosephosphate isomerase THEMA_01225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain THEMA_01225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain THEMA_01230 PF02575 YbaB/EbfC DNA-binding family THEMA_01235 PF12169 DNA polymerase III subunits gamma and tau domain III THEMA_01265 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THEMA_01265 PF04509 CheC-like family THEMA_01270 PF02154 Flagellar motor switch protein FliM THEMA_01270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term THEMA_01280 PF00691 OmpA family THEMA_01280 PF13677 Membrane MotB of proton-channel complex MotA/MotB THEMA_01285 PF01618 MotA/TolQ/ExbB proton channel family THEMA_01290 PF06289 Flagellar and Swarming motility proteins THEMA_01295 PF00460 Flagella basal body rod protein THEMA_01295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_01295 PF07559 Flagellar basal body protein FlaE THEMA_01325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THEMA_01330 PF01026 TatD related DNase THEMA_01335 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_01340 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_01355 PF00550 Phosphopantetheine attachment site THEMA_01365 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase THEMA_01370 PF00301 Rubredoxin THEMA_01375 PF01880 Desulfoferrodoxin THEMA_01380 PF02915 Rubrerythrin THEMA_01385 PF01381 Helix-turn-helix THEMA_01390 PF02675 S-adenosylmethionine decarboxylase THEMA_01395 PF17284 Spermidine synthase tetramerisation domain THEMA_01400 PF00919 Uncharacterized protein family UPF0004 THEMA_01400 PF01938 TRAM domain THEMA_01400 PF04055 Radical SAM superfamily THEMA_01430 PF02542 YgbB family THEMA_01440 PF02540 NAD synthase THEMA_01450 PF03415 Clostripain family THEMA_01460 PF13419 Haloacid dehalogenase-like hydrolase THEMA_01470 PF02563 Polysaccharide biosynthesis/export protein THEMA_01470 PF10531 SLBB domain THEMA_01470 PF18412 Outer-membrane lipoprotein Wza C-terminal domain THEMA_01495 PF10135 Rod binding protein THEMA_01495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase THEMA_01500 PF02397 Bacterial sugar transferase THEMA_01505 PF00534 Glycosyl transferases group 1 THEMA_01505 PF13477 Glycosyl transferase 4-like THEMA_01510 PF16363 GDP-mannose 4,6 dehydratase THEMA_01525 PF00534 Glycosyl transferases group 1 THEMA_01525 PF13439 Glycosyltransferase Family 4 THEMA_01540 PF13439 Glycosyltransferase Family 4 THEMA_01540 PF00534 Glycosyl transferases group 1 THEMA_01550 PF13439 Glycosyltransferase Family 4 THEMA_01550 PF00534 Glycosyl transferases group 1 THEMA_01560 PF00535 Glycosyl transferase family 2 THEMA_01560 PF01501 Glycosyl transferase family 8 THEMA_01570 PF13439 Glycosyltransferase Family 4 THEMA_01570 PF00534 Glycosyl transferases group 1 THEMA_01575 PF13195 Protein of unknown function (DUF4011) THEMA_01575 PF13086 AAA domain THEMA_01575 PF13087 AAA domain THEMA_01575 PF13195 Protein of unknown function (DUF4011) THEMA_01575 PF13086 AAA domain THEMA_01575 PF13087 AAA domain THEMA_01615 PF02350 UDP-N-acetylglucosamine 2-epimerase THEMA_01630 PF00753 Metallo-beta-lactamase superfamily THEMA_01630 PF16123 Hydroxyacylglutathione hydrolase C-terminus THEMA_01640 PF01084 Ribosomal protein S18 THEMA_01645 PF00436 Single-strand binding protein family THEMA_01650 PF01250 Ribosomal protein S6 THEMA_01680 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_01690 PF00860 Permease family THEMA_01705 PF00005 ABC transporter THEMA_01710 PF03717 Penicillin-binding Protein dimerisation domain THEMA_01710 PF00905 Penicillin binding protein transpeptidase domain THEMA_01730 PF01368 DHH family THEMA_01730 PF00571 CBS domain THEMA_01730 PF07085 DRTGG domain THEMA_01730 PF02833 DHHA2 domain THEMA_01735 PF00892 EamA-like transporter family THEMA_01740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEMA_01740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEMA_01750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain THEMA_01750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain THEMA_01750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain THEMA_01765 PF01434 Peptidase family M41 THEMA_01765 PF06480 FtsH Extracellular THEMA_01765 PF17862 AAA+ lid domain THEMA_01765 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_01770 PF01171 PP-loop family THEMA_01770 PF11734 TilS substrate C-terminal domain THEMA_01780 PF14748 Pyrroline-5-carboxylate reductase dimerisation THEMA_01780 PF03807 NADP oxidoreductase coenzyme F420-dependent THEMA_01785 PF00583 Acetyltransferase (GNAT) family THEMA_01790 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEMA_01790 PF00929 Exonuclease THEMA_01790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEMA_01790 PF02811 PHP domain THEMA_01790 PF14579 Helix-hairpin-helix motif THEMA_01795 PF02075 Crossover junction endodeoxyribonuclease RuvC THEMA_01800 PF02547 Queuosine biosynthesis protein THEMA_01805 PF00795 Carbon-nitrogen hydrolase THEMA_01810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family THEMA_01815 PF13180 PDZ domain THEMA_01815 PF17820 PDZ domain THEMA_01820 PF02881 SRP54-type protein, helical bundle domain THEMA_01820 PF00448 SRP54-type protein, GTPase domain THEMA_01835 PF02082 Transcriptional regulator THEMA_01845 PF03749 Sugar fermentation stimulation protein RE domain THEMA_01845 PF17746 SfsA N-terminal OB domain THEMA_01870 PF01544 CorA-like Mg2+ transporter protein THEMA_01885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain THEMA_01885 PF00117 Glutamine amidotransferase class-I THEMA_01890 PF02142 MGS-like domain THEMA_01890 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain THEMA_01890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain THEMA_01895 PF00180 Isocitrate/isopropylmalate dehydrogenase THEMA_01900 PF00694 Aconitase C-terminal domain THEMA_01905 PF00330 Aconitase family (aconitate hydratase) THEMA_01910 PF00682 HMGL-like THEMA_01910 PF08502 LeuA allosteric (dimerisation) domain THEMA_01915 PF00682 HMGL-like THEMA_01915 PF08502 LeuA allosteric (dimerisation) domain THEMA_01920 PF00920 Dehydratase family THEMA_01925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain THEMA_01925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain THEMA_01930 PF10369 Small subunit of acetolactate synthase THEMA_01935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain THEMA_01935 PF00205 Thiamine pyrophosphate enzyme, central domain THEMA_01935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_01940 PF00696 Amino acid kinase family THEMA_01940 PF01842 ACT domain THEMA_01940 PF13840 ACT domain THEMA_01945 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_01950 PF00288 GHMP kinases N terminal domain THEMA_01955 PF00005 ABC transporter THEMA_01965 PF03949 Malic enzyme, NAD binding domain THEMA_01965 PF00390 Malic enzyme, N-terminal domain THEMA_01970 PF05681 Fumarate hydratase (Fumerase) THEMA_01970 PF05683 Fumarase C-terminus THEMA_01980 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_01985 PF01545 Cation efflux family THEMA_01990 PF13514 AAA domain THEMA_02005 PF04539 Sigma-70 region 3 THEMA_02005 PF04542 Sigma-70 region 2 THEMA_02005 PF00140 Sigma-70 factor, region 1.2 THEMA_02005 PF03979 Sigma-70 factor, region 1.1 THEMA_02005 PF04545 Sigma-70, region 4 THEMA_02010 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_02010 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02015 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_02025 PF00005 ABC transporter THEMA_02025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_02030 PF00403 Heavy-metal-associated domain THEMA_02035 PF00551 Formyl transferase THEMA_02035 PF02911 Formyl transferase, C-terminal domain THEMA_02040 PF13167 GTP-binding GTPase N-terminal THEMA_02040 PF16360 GTP-binding GTPase Middle Region THEMA_02040 PF01926 50S ribosome-binding GTPase THEMA_02045 PF17209 Hfq protein THEMA_02065 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_02065 PF07724 AAA domain (Cdc48 subfamily) THEMA_02065 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_02070 PF00227 Proteasome subunit THEMA_02100 PF04055 Radical SAM superfamily THEMA_02100 PF16199 Radical_SAM C-terminal domain THEMA_02105 PF04073 Aminoacyl-tRNA editing domain THEMA_02105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEMA_02105 PF03129 Anticodon binding domain THEMA_02110 PF01078 Magnesium chelatase, subunit ChlI THEMA_02110 PF13335 Magnesium chelatase, subunit ChlI C-terminal THEMA_02120 PF03167 Uracil DNA glycosylase superfamily THEMA_02130 PF16363 GDP-mannose 4,6 dehydratase THEMA_02135 PF01661 Macro domain THEMA_02135 PF12002 MgsA AAA+ ATPase C terminal THEMA_02135 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEMA_02135 PF16193 AAA C-terminal domain THEMA_02145 PF00118 TCP-1/cpn60 chaperonin family THEMA_02150 PF00166 Chaperonin 10 Kd subunit THEMA_02155 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02160 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_02160 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_02165 PF00005 ABC transporter THEMA_02170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_02170 PF00005 ABC transporter THEMA_02180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_02180 PF00005 ABC transporter THEMA_02190 PF00929 Exonuclease THEMA_02190 PF02811 PHP domain THEMA_02190 PF01336 OB-fold nucleic acid binding domain THEMA_02190 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEMA_02190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEMA_02190 PF14579 Helix-hairpin-helix motif THEMA_02190 PF11490 DNA polymerase III polC-type N-terminus II THEMA_02195 PF02562 PhoH-like protein THEMA_02195 PF13638 PIN domain THEMA_02200 PF04079 Segregation and condensation complex subunit ScpB THEMA_02205 PF02616 Segregation and condensation protein ScpA THEMA_02210 PF00579 tRNA synthetases class I (W and Y) THEMA_02220 PF02146 Sir2 family THEMA_02230 PF05175 Methyltransferase small domain THEMA_02230 PF17827 PrmC N-terminal domain THEMA_02235 PF01883 Iron-sulfur cluster assembly protein THEMA_02240 PF01910 Thiamine-binding protein THEMA_02245 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02255 PF00005 ABC transporter THEMA_02285 PF17760 UvrA interaction domain THEMA_02285 PF17755 UvrA DNA-binding domain THEMA_02285 PF00005 ABC transporter THEMA_02295 PF00579 tRNA synthetases class I (W and Y) THEMA_02295 PF01479 S4 domain THEMA_02300 PF00395 S-layer homology domain THEMA_02315 PF00857 Isochorismatase family THEMA_02325 PF01680 SOR/SNZ family THEMA_02330 PF01174 SNO glutamine amidotransferase family THEMA_02350 PF00072 Response regulator receiver domain THEMA_02350 PF00486 Transcriptional regulatory protein, C terminal THEMA_02360 PF01709 Transcriptional regulator THEMA_02370 PF03705 CheR methyltransferase, all-alpha domain THEMA_02370 PF01739 CheR methyltransferase, SAM binding domain THEMA_02375 PF01252 Signal peptidase (SPase) II THEMA_02380 PF00849 RNA pseudouridylate synthase THEMA_02380 PF01479 S4 domain THEMA_02385 PF14579 Helix-hairpin-helix motif THEMA_02385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain THEMA_02385 PF07733 Bacterial DNA polymerase III alpha NTPase domain THEMA_02390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_02395 PF05000 RNA polymerase Rpb1, domain 4 THEMA_02395 PF04998 RNA polymerase Rpb1, domain 5 THEMA_02395 PF00623 RNA polymerase Rpb1, domain 2 THEMA_02395 PF04983 RNA polymerase Rpb1, domain 3 THEMA_02395 PF04997 RNA polymerase Rpb1, domain 1 THEMA_02400 PF04563 RNA polymerase beta subunit THEMA_02400 PF10385 RNA polymerase beta subunit external 1 domain THEMA_02400 PF04560 RNA polymerase Rpb2, domain 7 THEMA_02400 PF04565 RNA polymerase Rpb2, domain 3 THEMA_02400 PF00562 RNA polymerase Rpb2, domain 6 THEMA_02405 PF16320 Ribosomal protein L7/L12 dimerisation domain THEMA_02405 PF00542 Ribosomal protein L7/L12 C-terminal domain THEMA_02410 PF00466 Ribosomal protein L10 THEMA_02415 PF00687 Ribosomal protein L1p/L10e family THEMA_02420 PF00298 Ribosomal protein L11, RNA binding domain THEMA_02420 PF03946 Ribosomal protein L11, N-terminal domain THEMA_02425 PF18298 NusG additional domain THEMA_02425 PF02357 Transcription termination factor nusG THEMA_02425 PF00467 KOW motif THEMA_02430 PF00584 SecE/Sec61-gamma subunits of protein translocation complex THEMA_02440 PF00471 Ribosomal protein L33 THEMA_02480 PF02511 Thymidylate synthase complementing protein THEMA_02485 PF07244 Surface antigen variable number repeat THEMA_02485 PF01103 Surface antigen THEMA_02490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain THEMA_02490 PF02222 ATP-grasp domain THEMA_02495 PF00731 AIR carboxylase THEMA_02500 PF01926 50S ribosome-binding GTPase THEMA_02500 PF10396 GTP-binding protein TrmE N-terminus THEMA_02500 PF12631 MnmE helical domain THEMA_02505 PF00206 Lyase THEMA_02505 PF10415 Fumarase C C-terminus THEMA_02510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_02510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_02530 PF07729 FCD domain THEMA_02530 PF00392 Bacterial regulatory proteins, gntR family THEMA_02535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase THEMA_02535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain THEMA_02540 PF00295 Glycosyl hydrolases family 28 THEMA_02545 PF08240 Alcohol dehydrogenase GroES-like domain THEMA_02545 PF00107 Zinc-binding dehydrogenase THEMA_02550 PF05448 Acetyl xylan esterase (AXE1) THEMA_02555 PF02056 Family 4 glycosyl hydrolase THEMA_02555 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_02560 PF00544 Pectate lyase THEMA_02570 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02575 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_02585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family THEMA_02610 PF00465 Iron-containing alcohol dehydrogenase THEMA_02620 PF00005 ABC transporter THEMA_02620 PF03459 TOBE domain THEMA_02620 PF17912 MalK OB fold domain THEMA_02625 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02630 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_02640 PF03239 Iron permease FTR1 family THEMA_02645 PF01261 Xylose isomerase-like TIM barrel THEMA_02655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEMA_02655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEMA_02660 PF02633 Creatinine amidohydrolase THEMA_02665 PF08240 Alcohol dehydrogenase GroES-like domain THEMA_02665 PF00107 Zinc-binding dehydrogenase THEMA_02670 PF00480 ROK family THEMA_02670 PF01047 MarR family THEMA_02680 PF01551 Peptidase family M23 THEMA_02680 PF04225 Opacity-associated protein A LysM-like domain THEMA_02685 PF00072 Response regulator receiver domain THEMA_02685 PF01339 CheB methylesterase THEMA_02700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_02710 PF00543 Nitrogen regulatory protein P-II THEMA_02715 PF00909 Ammonium Transporter Family THEMA_02720 PF00265 Thymidine kinase THEMA_02725 PF00672 HAMP domain THEMA_02725 PF00512 His Kinase A (phospho-acceptor) domain THEMA_02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_02730 PF00072 Response regulator receiver domain THEMA_02730 PF00486 Transcriptional regulatory protein, C terminal THEMA_02740 PF00310 Glutamine amidotransferases class-II THEMA_02745 PF13187 4Fe-4S dicluster domain THEMA_02745 PF01645 Conserved region in glutamate synthase THEMA_02750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEMA_02750 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_02750 PF13247 4Fe-4S dicluster domain THEMA_02770 PF00534 Glycosyl transferases group 1 THEMA_02775 PF00005 ABC transporter THEMA_02790 PF00881 Nitroreductase family THEMA_02795 PF03477 ATP cone domain THEMA_02795 PF13597 Anaerobic ribonucleoside-triphosphate reductase THEMA_02805 PF00881 Nitroreductase family THEMA_02810 PF00730 HhH-GPD superfamily base excision DNA repair protein THEMA_02810 PF14815 NUDIX domain THEMA_02810 PF00633 Helix-hairpin-helix motif THEMA_02815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THEMA_02815 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_02825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain THEMA_02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_02830 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus THEMA_02830 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus THEMA_02835 PF01925 Sulfite exporter TauE/SafE THEMA_02840 PF06130 Phosphate propanoyltransferase THEMA_02845 PF00011 Hsp20/alpha crystallin family THEMA_02850 PF00012 Hsp70 protein THEMA_02855 PF00873 AcrB/AcrD/AcrF family THEMA_02860 PF02863 Arginine repressor, C-terminal domain THEMA_02860 PF01316 Arginine repressor, DNA binding domain THEMA_02865 PF06745 KaiC THEMA_02885 PF00730 HhH-GPD superfamily base excision DNA repair protein THEMA_02885 PF00633 Helix-hairpin-helix motif THEMA_02885 PF10576 Iron-sulfur binding domain of endonuclease III THEMA_02890 PF02127 Aminopeptidase I zinc metalloprotease (M18) THEMA_02895 PF00128 Alpha amylase, catalytic domain THEMA_02895 PF09178 Domain of unknown function (DUF1945) THEMA_02900 PF05670 NFACT protein RNA binding domain THEMA_02905 PF01261 Xylose isomerase-like TIM barrel THEMA_02915 PF03819 MazG nucleotide pyrophosphohydrolase domain THEMA_02925 PF00781 Diacylglycerol kinase catalytic domain THEMA_02935 PF13291 ACT domain THEMA_02935 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_02950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion THEMA_02955 PF00005 ABC transporter THEMA_02960 PF12704 MacB-like periplasmic core domain THEMA_02960 PF02687 FtsX-like permease family THEMA_02960 PF00005 ABC transporter THEMA_02970 PF01220 Dehydroquinase class II THEMA_02975 PF01202 Shikimate kinase THEMA_02975 PF01761 3-dehydroquinate synthase THEMA_02980 PF01264 Chorismate synthase THEMA_02985 PF08501 Shikimate dehydrogenase substrate binding domain THEMA_02985 PF01488 Shikimate / quinate 5-dehydrogenase THEMA_02990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THEMA_03000 PF18152 DAHP synthase ferredoxin-like domain THEMA_03000 PF00793 DAHP synthetase I family THEMA_03035 PF04055 Radical SAM superfamily THEMA_03035 PF08497 Radical SAM N-terminal THEMA_03040 PF12146 Serine aminopeptidase, S33 THEMA_03040 PF13026 Protein of unknown function (DUF3887) THEMA_03050 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THEMA_03055 PF01180 Dihydroorotate dehydrogenase THEMA_03060 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family THEMA_03065 PF00156 Phosphoribosyl transferase domain THEMA_03070 PF07969 Amidohydrolase family THEMA_03080 PF01555 DNA methylase THEMA_03090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THEMA_03090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THEMA_03095 PF01418 Helix-turn-helix domain, rpiR family THEMA_03095 PF01380 SIS domain THEMA_03105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component THEMA_03115 PF03480 Bacterial extracellular solute-binding protein, family 7 THEMA_03135 PF01209 ubiE/COQ5 methyltransferase family THEMA_03140 PF00403 Heavy-metal-associated domain THEMA_03160 PF00248 Aldo/keto reductase family THEMA_03165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain THEMA_03165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold THEMA_03175 PF08533 Beta-galactosidase C-terminal domain THEMA_03175 PF02449 Beta-galactosidase THEMA_03175 PF08532 Beta-galactosidase trimerisation domain THEMA_03180 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_03185 PF13802 Galactose mutarotase-like THEMA_03185 PF01055 Glycosyl hydrolases family 31 THEMA_03200 PF03442 Carbohydrate binding domain X2 THEMA_03200 PF00942 Cellulose binding domain THEMA_03205 PF00005 ABC transporter THEMA_03205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_03210 PF00005 ABC transporter THEMA_03210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_03215 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_03215 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_03220 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_03230 PF00356 Bacterial regulatory proteins, lacI family THEMA_03235 PF08240 Alcohol dehydrogenase GroES-like domain THEMA_03235 PF16912 Glucose dehydrogenase C-terminus THEMA_03245 PF00294 pfkB family carbohydrate kinase THEMA_03250 PF00923 Transaldolase/Fructose-6-phosphate aldolase THEMA_03255 PF00696 Amino acid kinase family THEMA_03255 PF01472 PUA domain THEMA_03260 PF00171 Aldehyde dehydrogenase family THEMA_03265 PF00694 Aconitase C-terminal domain THEMA_03270 PF00330 Aconitase family (aconitate hydratase) THEMA_03275 PF00285 Citrate synthase, C-terminal domain THEMA_03280 PF00365 Phosphofructokinase THEMA_03285 PF00664 ABC transporter transmembrane region THEMA_03285 PF00005 ABC transporter THEMA_03290 PF00005 ABC transporter THEMA_03290 PF00664 ABC transporter transmembrane region THEMA_03300 PF13685 Iron-containing alcohol dehydrogenase THEMA_03305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_03305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_03310 PF00596 Class II Aldolase and Adducin N-terminal domain THEMA_03315 PF01263 Aldose 1-epimerase THEMA_03320 PF06964 Alpha-L-arabinofuranosidase C-terminal domain THEMA_03330 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_03335 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_03345 PF02610 L-arabinose isomerase THEMA_03345 PF11762 L-arabinose isomerase C-terminal domain THEMA_03350 PF00392 Bacterial regulatory proteins, gntR family THEMA_03355 PF00871 Acetokinase family THEMA_03360 PF01116 Fructose-bisphosphate aldolase class-II THEMA_03365 PF00391 PEP-utilising enzyme, mobile domain THEMA_03365 PF02896 PEP-utilising enzyme, TIM barrel domain THEMA_03365 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain THEMA_03375 PF02219 Methylenetetrahydrofolate reductase THEMA_03375 PF02574 Homocysteine S-methyltransferase THEMA_03385 PF02310 B12 binding domain THEMA_03385 PF02574 Homocysteine S-methyltransferase THEMA_03385 PF02965 Vitamin B12 dependent methionine synthase, activation domain THEMA_03385 PF00809 Pterin binding enzyme THEMA_03385 PF02607 B12 binding domain THEMA_03390 PF01926 50S ribosome-binding GTPase THEMA_03390 PF12631 MnmE helical domain THEMA_03390 PF10396 GTP-binding protein TrmE N-terminus THEMA_03395 PF00216 Bacterial DNA-binding protein THEMA_03400 PF08459 UvrC Helix-hairpin-helix N-terminal THEMA_03400 PF02151 UvrB/uvrC motif THEMA_03400 PF01541 GIY-YIG catalytic domain THEMA_03405 PF00849 RNA pseudouridylate synthase THEMA_03405 PF01479 S4 domain THEMA_03410 PF13932 GidA associated domain THEMA_03410 PF01134 Glucose inhibited division protein A THEMA_03415 PF00712 DNA polymerase III beta subunit, N-terminal domain THEMA_03415 PF02767 DNA polymerase III beta subunit, central domain THEMA_03415 PF02768 DNA polymerase III beta subunit, C-terminal domain THEMA_03420 PF01384 Phosphate transporter family THEMA_03430 PF01820 D-ala D-ala ligase N-terminus THEMA_03430 PF07478 D-ala D-ala ligase C-terminus THEMA_03435 PF01751 Toprim domain THEMA_03435 PF01131 DNA topoisomerase THEMA_03440 PF01966 HD domain THEMA_03440 PF01336 OB-fold nucleic acid binding domain THEMA_03450 PF00830 Ribosomal L28 family THEMA_03455 PF01668 SmpB protein THEMA_03460 PF02021 Uncharacterised protein family UPF0102 THEMA_03465 PF02686 Glu-tRNAGln amidotransferase C subunit THEMA_03470 PF02599 Global regulator protein family THEMA_03475 PF18255 DNA processing protein A sterile alpha motif domain THEMA_03475 PF02481 DNA recombination-mediator protein A THEMA_03480 PF13187 4Fe-4S dicluster domain THEMA_03480 PF04060 Putative Fe-S cluster THEMA_03485 PF02508 Rnf-Nqr subunit, membrane protein THEMA_03490 PF02508 Rnf-Nqr subunit, membrane protein THEMA_03500 PF03116 NQR2, RnfD, RnfE family THEMA_03505 PF13237 4Fe-4S dicluster domain THEMA_03505 PF13375 RnfC Barrel sandwich hybrid domain THEMA_03505 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_03505 PF10531 SLBB domain THEMA_03510 PF04055 Radical SAM superfamily THEMA_03510 PF06968 Biotin and Thiamin Synthesis associated domain THEMA_03525 PF00483 Nucleotidyl transferase THEMA_03525 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_03530 PF00483 Nucleotidyl transferase THEMA_03530 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_03540 PF01225 Mur ligase family, catalytic domain THEMA_03540 PF08245 Mur ligase middle domain THEMA_03540 PF02875 Mur ligase family, glutamate ligase domain THEMA_03545 PF02875 Mur ligase family, glutamate ligase domain THEMA_03545 PF01225 Mur ligase family, catalytic domain THEMA_03545 PF08245 Mur ligase middle domain THEMA_03550 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 THEMA_03550 PF00953 Glycosyl transferase family 4 THEMA_03555 PF08245 Mur ligase middle domain THEMA_03560 PF01098 Cell cycle protein THEMA_03565 PF04101 Glycosyltransferase family 28 C-terminal domain THEMA_03565 PF03033 Glycosyltransferase family 28 N-terminal domain THEMA_03570 PF08245 Mur ligase middle domain THEMA_03570 PF02875 Mur ligase family, glutamate ligase domain THEMA_03570 PF01225 Mur ligase family, catalytic domain THEMA_03585 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_03585 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEMA_03585 PF00037 4Fe-4S binding domain THEMA_03600 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_03605 PF02237 Biotin protein ligase C terminal domain THEMA_03605 PF08279 HTH domain THEMA_03605 PF03099 Biotin/lipoate A/B protein ligase family THEMA_03615 PF00005 ABC transporter THEMA_03620 PF08345 Flagellar M-ring protein C-terminal THEMA_03620 PF01514 Secretory protein of YscJ/FliF family THEMA_03625 PF01706 FliG C-terminal domain THEMA_03625 PF14841 FliG middle domain THEMA_03625 PF14842 FliG N-terminal domain THEMA_03630 PF02108 Flagellar assembly protein FliH THEMA_03635 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEMA_03635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_03635 PF18269 T3SS EscN ATPase C-terminal domain THEMA_03640 PF02092 Glycyl-tRNA synthetase beta subunit THEMA_03640 PF05746 DALR anticodon binding domain THEMA_03645 PF02091 Glycyl-tRNA synthetase alpha subunit THEMA_03650 PF01042 Endoribonuclease L-PSP THEMA_03655 PF02347 Glycine cleavage system P-protein THEMA_03660 PF02347 Glycine cleavage system P-protein THEMA_03665 PF01597 Glycine cleavage H-protein THEMA_03670 PF08669 Glycine cleavage T-protein C-terminal barrel domain THEMA_03670 PF01571 Aminomethyltransferase folate-binding domain THEMA_03680 PF00365 Phosphofructokinase THEMA_03685 PF02887 Pyruvate kinase, alpha/beta domain THEMA_03685 PF00224 Pyruvate kinase, barrel domain THEMA_03705 PF00270 DEAD/DEAH box helicase THEMA_03705 PF00271 Helicase conserved C-terminal domain THEMA_03705 PF17191 RecG wedge domain THEMA_03710 PF00005 ABC transporter THEMA_03725 PF00037 4Fe-4S binding domain THEMA_03725 PF02256 Iron hydrogenase small subunit THEMA_03725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THEMA_03725 PF02906 Iron only hydrogenase large subunit, C-terminal domain THEMA_03730 PF00633 Helix-hairpin-helix motif THEMA_03730 PF10635 DisA bacterial checkpoint controller linker region THEMA_03730 PF02457 DisA bacterial checkpoint controller nucleotide-binding THEMA_03735 PF18073 Rubredoxin metal binding domain THEMA_03740 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_03740 PF02861 Clp amino terminal domain, pathogenicity island component THEMA_03740 PF17871 AAA lid domain THEMA_03740 PF07724 AAA domain (Cdc48 subfamily) THEMA_03740 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_03745 PF01171 PP-loop family THEMA_03755 PF02541 Ppx/GppA phosphatase family THEMA_03775 PF03649 Uncharacterised protein family (UPF0014) THEMA_03805 PF04232 Stage V sporulation protein S (SpoVS) THEMA_03810 PF00005 ABC transporter THEMA_03815 PF01032 FecCD transport family THEMA_03825 PF01980 tRNA-methyltransferase O THEMA_03835 PF00512 His Kinase A (phospho-acceptor) domain THEMA_03835 PF09308 LuxQ, periplasmic THEMA_03835 PF00072 Response regulator receiver domain THEMA_03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_03855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II THEMA_03855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain THEMA_03855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III THEMA_03855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I THEMA_03860 PF00795 Carbon-nitrogen hydrolase THEMA_03860 PF02540 NAD synthase THEMA_03865 PF04055 Radical SAM superfamily THEMA_03865 PF00919 Uncharacterized protein family UPF0004 THEMA_03865 PF01938 TRAM domain THEMA_03910 PF17764 3′ DNA-binding domain (3′BD) THEMA_03910 PF18074 Primosomal protein N C-terminal domain THEMA_03910 PF04851 Type III restriction enzyme, res subunit THEMA_03910 PF18319 PriA DNA helicase Cys-rich region (CRR) domain THEMA_03915 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) THEMA_03915 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 THEMA_03925 PF00550 Phosphopantetheine attachment site THEMA_03930 PF03030 Inorganic H+ pyrophosphatase THEMA_03935 PF01131 DNA topoisomerase THEMA_03935 PF00270 DEAD/DEAH box helicase THEMA_03935 PF17915 Reverse gyrase zinc finger THEMA_03935 PF01751 Toprim domain THEMA_03940 PF05221 S-adenosyl-L-homocysteine hydrolase THEMA_03940 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain THEMA_03955 PF02629 CoA binding domain THEMA_03955 PF06971 Putative DNA-binding protein N-terminus THEMA_03960 PF13603 Leucyl-tRNA synthetase, Domain 2 THEMA_03960 PF09334 tRNA synthetases class I (M) THEMA_03960 PF08264 Anticodon-binding domain of tRNA THEMA_03960 PF00133 tRNA synthetases class I (I, L, M and V) THEMA_03965 PF01676 Metalloenzyme superfamily THEMA_03970 PF08245 Mur ligase middle domain THEMA_03970 PF02875 Mur ligase family, glutamate ligase domain THEMA_03975 PF01330 RuvA N terminal domain THEMA_03975 PF07499 RuvA, C-terminal domain THEMA_03995 PF00348 Polyprenyl synthetase THEMA_04005 PF01725 Ham1 family THEMA_04010 PF01790 Prolipoprotein diacylglyceryl transferase THEMA_04025 PF00245 Alkaline phosphatase THEMA_04030 PF00800 Prephenate dehydratase THEMA_04030 PF01817 Chorismate mutase type II THEMA_04030 PF01842 ACT domain THEMA_04050 PF01783 Ribosomal L32p protein family THEMA_04055 PF02504 Fatty acid synthesis protein THEMA_04060 PF01380 SIS domain THEMA_04070 PF06689 ClpX C4-type zinc finger THEMA_04070 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_04070 PF07724 AAA domain (Cdc48 subfamily) THEMA_04075 PF00814 Glycoprotease family THEMA_04090 PF00990 Diguanylate cyclase, GGDEF domain THEMA_04090 PF00072 Response regulator receiver domain THEMA_04095 PF04715 Anthranilate synthase component I, N terminal region THEMA_04095 PF00425 chorismate binding enzyme THEMA_04100 PF00117 Glutamine amidotransferase class-I THEMA_04100 PF02885 Glycosyl transferase family, helical bundle domain THEMA_04100 PF00591 Glycosyl transferase family, a/b domain THEMA_04105 PF00218 Indole-3-glycerol phosphate synthase THEMA_04110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase THEMA_04115 PF00291 Pyridoxal-phosphate dependent enzyme THEMA_04120 PF00290 Tryptophan synthase alpha chain THEMA_04125 PF04055 Radical SAM superfamily THEMA_04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_04140 PF00857 Isochorismatase family THEMA_04145 PF00669 Bacterial flagellin N-terminal helical region THEMA_04145 PF00700 Bacterial flagellin C-terminal helical region THEMA_04155 PF07690 Major Facilitator Superfamily THEMA_04165 PF02436 Conserved carboxylase domain THEMA_04165 PF00682 HMGL-like THEMA_04165 PF00364 Biotin-requiring enzyme THEMA_04175 PF00072 Response regulator receiver domain THEMA_04175 PF00486 Transcriptional regulatory protein, C terminal THEMA_04180 PF00950 ABC 3 transport family THEMA_04185 PF00005 ABC transporter THEMA_04190 PF01297 Zinc-uptake complex component A periplasmic THEMA_04205 PF00881 Nitroreductase family THEMA_04215 PF00317 Ribonucleotide reductase, all-alpha domain THEMA_04215 PF02867 Ribonucleotide reductase, barrel domain THEMA_04215 PF03477 ATP cone domain THEMA_04225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_04225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_04230 PF00005 ABC transporter THEMA_04240 PF01522 Polysaccharide deacetylase THEMA_04245 PF02653 Branched-chain amino acid transport system / permease component THEMA_04250 PF00465 Iron-containing alcohol dehydrogenase THEMA_04255 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEMA_04255 PF00480 ROK family THEMA_04265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) THEMA_04305 PF01653 NAD-dependent DNA ligase adenylation domain THEMA_04305 PF00533 BRCA1 C Terminus (BRCT) domain THEMA_04305 PF12826 Helix-hairpin-helix motif THEMA_04305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain THEMA_04305 PF03120 NAD-dependent DNA ligase OB-fold domain THEMA_04315 PF01926 50S ribosome-binding GTPase THEMA_04315 PF01018 GTP1/OBG THEMA_04315 PF09269 Domain of unknown function (DUF1967) THEMA_04320 PF01467 Cytidylyltransferase-like THEMA_04325 PF01207 Dihydrouridine synthase (Dus) THEMA_04330 PF02915 Rubrerythrin THEMA_04335 PF00482 Type II secretion system (T2SS), protein F THEMA_04365 PF07660 Secretin and TonB N terminus short domain THEMA_04365 PF11741 AMIN domain THEMA_04365 PF03958 Bacterial type II/III secretion system short domain THEMA_04365 PF00263 Bacterial type II and III secretion system protein THEMA_04370 PF01875 Memo-like protein THEMA_04375 PF03023 Lipid II flippase MurJ THEMA_04390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_04390 PF07196 Flagellin hook IN motif THEMA_04395 PF00669 Bacterial flagellin N-terminal helical region THEMA_04400 PF02623 FliW protein THEMA_04405 PF01497 Periplasmic binding protein THEMA_04410 PF01032 FecCD transport family THEMA_04415 PF00005 ABC transporter THEMA_04420 PF05448 Acetyl xylan esterase (AXE1) THEMA_04425 PF14310 Fibronectin type III-like domain THEMA_04425 PF00933 Glycosyl hydrolase family 3 N terminal domain THEMA_04425 PF01915 Glycosyl hydrolase family 3 C-terminal domain THEMA_04430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_04430 PF00005 ABC transporter THEMA_04435 PF00005 ABC transporter THEMA_04435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_04440 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_04440 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04445 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_04455 PF00331 Glycosyl hydrolase family 10 THEMA_04460 PF03786 D-mannonate dehydratase (UxuA) THEMA_04465 PF01232 Mannitol dehydrogenase Rossmann domain THEMA_04465 PF08125 Mannitol dehydrogenase C-terminal domain THEMA_04475 PF01081 KDPG and KHG aldolase THEMA_04480 PF09339 IclR helix-turn-helix domain THEMA_04480 PF01614 Bacterial transcriptional regulator THEMA_04485 PF02614 Glucuronate isomerase THEMA_04500 PF06452 Carbohydrate family 9 binding domain-like THEMA_04500 PF02018 Carbohydrate binding domain THEMA_04500 PF00331 Glycosyl hydrolase family 10 THEMA_04505 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04510 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_04510 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04515 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_04515 PF00005 ABC transporter THEMA_04520 PF00005 ABC transporter THEMA_04520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_04525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_04530 PF07477 Glycosyl hydrolase family 67 C-terminus THEMA_04530 PF03648 Glycosyl hydrolase family 67 N-terminus THEMA_04530 PF07488 Glycosyl hydrolase family 67 middle domain THEMA_04550 PF17910 FeoB cytosolic helical domain THEMA_04550 PF04023 FeoA domain THEMA_04550 PF07670 Nucleoside recognition THEMA_04550 PF02421 Ferrous iron transport protein B THEMA_04550 PF07664 Ferrous iron transport protein B C terminus THEMA_04560 PF04015 Domain of unknown function (DUF362) THEMA_04570 PF01385 Probable transposase THEMA_04570 PF07282 Putative transposase DNA-binding domain THEMA_04570 PF12323 Helix-turn-helix domain THEMA_04585 PF00664 ABC transporter transmembrane region THEMA_04585 PF00005 ABC transporter THEMA_04590 PF00557 Metallopeptidase family M24 THEMA_04590 PF01321 Creatinase/Prolidase N-terminal domain THEMA_04595 PF02152 Dihydroneopterin aldolase THEMA_04595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) THEMA_04600 PF00809 Pterin binding enzyme THEMA_04605 PF02649 Type I GTP cyclohydrolase folE2 THEMA_04610 PF01242 6-pyruvoyl tetrahydropterin synthase THEMA_04615 PF01966 HD domain THEMA_04620 PF03266 NTPase THEMA_04640 PF00480 ROK family THEMA_04645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_04650 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04660 PF00005 ABC transporter THEMA_04660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_04665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_04665 PF00005 ABC transporter THEMA_04675 PF01915 Glycosyl hydrolase family 3 C-terminal domain THEMA_04675 PF14310 Fibronectin type III-like domain THEMA_04675 PF00933 Glycosyl hydrolase family 3 N terminal domain THEMA_04680 PF00722 Glycosyl hydrolases family 16 THEMA_04685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_04690 PF01119 DNA mismatch repair protein, C-terminal domain THEMA_04690 PF08676 MutL C terminal dimerisation domain THEMA_04695 PF02641 Uncharacterized ACR, COG1993 THEMA_04700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) THEMA_04710 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_04715 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II THEMA_04715 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg THEMA_04725 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase THEMA_04730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_04750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_04750 PF00037 4Fe-4S binding domain THEMA_04750 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEMA_04760 PF04199 Putative cyclase THEMA_04770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain THEMA_04770 PF13378 Enolase C-terminal domain-like THEMA_04780 PF00149 Calcineurin-like phosphoesterase THEMA_04780 PF02872 5'-nucleotidase, C-terminal domain THEMA_04790 PF12850 Calcineurin-like phosphoesterase superfamily domain THEMA_04795 PF00749 tRNA synthetases class I (E and Q), catalytic domain THEMA_04800 PF00313 'Cold-shock' DNA-binding domain THEMA_04805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THEMA_04805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THEMA_04810 PF01894 Uncharacterised protein family UPF0047 THEMA_04820 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEMA_04825 PF05362 Lon protease (S16) C-terminal proteolytic domain THEMA_04825 PF13654 AAA domain THEMA_04830 PF02361 Cobalt transport protein THEMA_04835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain THEMA_04835 PF00056 lactate/malate dehydrogenase, NAD binding domain THEMA_04845 PF04493 Endonuclease V THEMA_04860 PF04055 Radical SAM superfamily THEMA_04860 PF18693 TRAM domain THEMA_04860 PF00919 Uncharacterized protein family UPF0004 THEMA_04865 PF01066 CDP-alcohol phosphatidyltransferase THEMA_04875 PF00154 recA bacterial DNA recombination protein THEMA_04880 PF02631 RecX family THEMA_04885 PF01966 HD domain THEMA_04885 PF00013 KH domain THEMA_04885 PF12072 Domain of unknown function (DUF3552) THEMA_04890 PF00356 Bacterial regulatory proteins, lacI family THEMA_04900 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04905 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04930 PF06165 Glycosyltransferase family 36 THEMA_04930 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain THEMA_04935 PF00232 Glycosyl hydrolase family 1 THEMA_04940 PF01547 Bacterial extracellular solute-binding protein THEMA_04945 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04950 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_04955 PF13407 Periplasmic binding protein domain THEMA_04960 PF02653 Branched-chain amino acid transport system / permease component THEMA_04965 PF00005 ABC transporter THEMA_04970 PF00480 ROK family THEMA_04970 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEMA_04980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) THEMA_04980 PF00128 Alpha amylase, catalytic domain THEMA_04980 PF03714 Bacterial pullanase-associated domain THEMA_05005 PF00128 Alpha amylase, catalytic domain THEMA_05010 PF01547 Bacterial extracellular solute-binding protein THEMA_05015 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_05015 PF14785 Maltose transport system permease protein MalF P2 domain THEMA_05020 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_05025 PF00128 Alpha amylase, catalytic domain THEMA_05030 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_05030 PF02056 Family 4 glycosyl hydrolase THEMA_05050 PF00072 Response regulator receiver domain THEMA_05050 PF00990 Diguanylate cyclase, GGDEF domain THEMA_05055 PF01872 RibD C-terminal domain THEMA_05055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region THEMA_05060 PF00677 Lumazine binding domain THEMA_05065 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase THEMA_05065 PF00925 GTP cyclohydrolase II THEMA_05070 PF00885 6,7-dimethyl-8-ribityllumazine synthase THEMA_05080 PF01145 SPFH domain / Band 7 family THEMA_05085 PF12221 Bacterial membrane protein N terminal THEMA_05085 PF01145 SPFH domain / Band 7 family THEMA_05095 PF00117 Glutamine amidotransferase class-I THEMA_05095 PF02568 Thiamine biosynthesis protein (ThiI) THEMA_05095 PF00958 GMP synthase C terminal domain THEMA_05105 PF02417 Chromate transporter THEMA_05110 PF00133 tRNA synthetases class I (I, L, M and V) THEMA_05110 PF08264 Anticodon-binding domain of tRNA THEMA_05110 PF10458 Valyl tRNA synthetase tRNA binding arm THEMA_05135 PF18211 Csm1 subunit domain B THEMA_05145 PF03787 RAMP superfamily THEMA_05155 PF03787 RAMP superfamily THEMA_05175 PF00226 DnaJ domain THEMA_05175 PF01556 DnaJ C terminal domain THEMA_05175 PF00684 DnaJ central domain THEMA_05195 PF18395 Cas3 C-terminal domain THEMA_05195 PF00270 DEAD/DEAH box helicase THEMA_05195 PF18019 HD domain THEMA_05205 PF01867 CRISPR associated protein Cas1 THEMA_05210 PF09827 CRISPR associated protein Cas2 THEMA_05235 PF09701 CRISPR-associated protein (Cas_Cmr5) THEMA_05275 PF00202 Aminotransferase class-III THEMA_05280 PF00696 Amino acid kinase family THEMA_05285 PF01960 ArgJ family THEMA_05290 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEMA_05290 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEMA_05295 PF00206 Lyase THEMA_05300 PF00764 Arginosuccinate synthase THEMA_05315 PF17384 RimP C-terminal SH3 domain THEMA_05315 PF02576 RimP N-terminal domain THEMA_05320 PF13184 NusA-like KH domain THEMA_05320 PF00575 S1 RNA binding domain THEMA_05320 PF08529 NusA N-terminal domain THEMA_05325 PF01475 Ferric uptake regulator family THEMA_05355 PF01676 Metalloenzyme superfamily THEMA_05355 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase THEMA_05365 PF13684 Dihydroxyacetone kinase family THEMA_05365 PF02734 DAK2 domain THEMA_05375 PF02780 Transketolase, C-terminal domain THEMA_05375 PF02779 Transketolase, pyrimidine binding domain THEMA_05375 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THEMA_05380 PF02609 Exonuclease VII small subunit THEMA_05385 PF02601 Exonuclease VII, large subunit THEMA_05385 PF13742 OB-fold nucleic acid binding domain THEMA_05390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain THEMA_05390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain THEMA_05395 PF01268 Formate--tetrahydrofolate ligase THEMA_05400 PF01029 NusB family THEMA_05410 PF08207 Elongation factor P (EF-P) KOW-like domain THEMA_05410 PF01132 Elongation factor P (EF-P) OB domain THEMA_05410 PF09285 Elongation factor P, C-terminal THEMA_05415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase THEMA_05415 PF02779 Transketolase, pyrimidine binding domain THEMA_05415 PF02780 Transketolase, C-terminal domain THEMA_05420 PF12344 Ultra-violet resistance protein B THEMA_05420 PF02151 UvrB/uvrC motif THEMA_05420 PF17757 UvrB interaction domain THEMA_05420 PF04851 Type III restriction enzyme, res subunit THEMA_05420 PF00271 Helicase conserved C-terminal domain THEMA_05455 PF00871 Acetokinase family THEMA_05460 PF01515 Phosphate acetyl/butaryl transferase THEMA_05465 PF00871 Acetokinase family THEMA_05470 PF00271 Helicase conserved C-terminal domain THEMA_05470 PF04851 Type III restriction enzyme, res subunit THEMA_05470 PF02151 UvrB/uvrC motif THEMA_05470 PF17757 UvrB interaction domain THEMA_05470 PF12344 Ultra-violet resistance protein B THEMA_05480 PF00404 Dockerin type I domain THEMA_05480 PF03425 Carbohydrate binding domain (family 11) THEMA_05480 PF00150 Cellulase (glycosyl hydrolase family 5) THEMA_05485 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_05485 PF00005 ABC transporter THEMA_05490 PF00005 ABC transporter THEMA_05490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_05495 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_05495 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_05500 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_05505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_05515 PF01212 Beta-eliminating lyase THEMA_05520 PF00248 Aldo/keto reductase family THEMA_05525 PF13344 Haloacid dehalogenase-like hydrolase THEMA_05530 PF00588 SpoU rRNA Methylase family THEMA_05530 PF08032 RNA 2'-O ribose methyltransferase substrate binding THEMA_05535 PF00636 Ribonuclease III domain THEMA_05545 PF02535 ZIP Zinc transporter THEMA_05550 PF01048 Phosphorylase superfamily THEMA_05555 PF03796 DnaB-like helicase C terminal domain THEMA_05555 PF00772 DnaB-like helicase N terminal domain THEMA_05565 PF01895 PhoU domain THEMA_05570 PF01513 ATP-NAD kinase THEMA_05575 PF02325 YGGT family THEMA_05580 PF01168 Alanine racemase, N-terminal domain THEMA_05585 PF17864 RuvB AAA lid domain THEMA_05585 PF05491 RuvB C-terminal winged helix domain THEMA_05585 PF05496 Holliday junction DNA helicase RuvB P-loop domain THEMA_05595 PF02548 Ketopantoate hydroxymethyltransferase THEMA_05605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEMA_05605 PF01411 tRNA synthetases class II (A) THEMA_05605 PF02272 DHHA1 domain THEMA_05610 PF01813 ATP synthase subunit D THEMA_05625 PF01979 Amidohydrolase family THEMA_05640 PF13673 Acetyltransferase (GNAT) domain THEMA_05645 PF01624 MutS domain I THEMA_05645 PF00488 MutS domain V THEMA_05645 PF05188 MutS domain II THEMA_05645 PF05190 MutS family domain IV THEMA_05645 PF05192 MutS domain III THEMA_05650 PF00834 Ribulose-phosphate 3 epimerase family THEMA_05655 PF16745 RsgA N-terminal domain THEMA_05655 PF03193 RsgA GTPase THEMA_05665 PF04055 Radical SAM superfamily THEMA_05670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain THEMA_05670 PF01565 FAD binding domain THEMA_05675 PF09186 Domain of unknown function (DUF1949) THEMA_05675 PF01205 Uncharacterized protein family UPF0029 THEMA_05690 PF03668 P-loop ATPase protein family THEMA_05695 PF01933 Uncharacterised protein family UPF0052 THEMA_05700 PF02650 WhiA C-terminal HTH domain THEMA_05700 PF14527 WhiA LAGLIDADG-like domain THEMA_05705 PF03477 ATP cone domain THEMA_05710 PF01272 Transcription elongation factor, GreA/GreB, C-term THEMA_05710 PF03449 Transcription elongation factor, N-terminal THEMA_05715 PF00152 tRNA synthetases class II (D, K and N) THEMA_05715 PF01336 OB-fold nucleic acid binding domain THEMA_05725 PF00884 Sulfatase THEMA_05735 PF01554 MatE THEMA_05745 PF00072 Response regulator receiver domain THEMA_05750 PF00155 Aminotransferase class I and II THEMA_05755 PF17785 PUA-like domain THEMA_05755 PF10672 S-adenosylmethionine-dependent methyltransferase THEMA_05760 PF01478 Type IV leader peptidase family THEMA_05760 PF06750 Bacterial Peptidase A24 N-terminal domain THEMA_05770 PF02926 THUMP domain THEMA_05770 PF02568 Thiamine biosynthesis protein (ThiI) THEMA_05780 PF00266 Aminotransferase class-V THEMA_05790 PF04025 Domain of unknown function (DUF370) THEMA_05795 PF00625 Guanylate kinase THEMA_05800 PF01192 RNA polymerase Rpb6 THEMA_05805 PF04127 DNA / pantothenate metabolism flavoprotein THEMA_05805 PF02441 Flavoprotein THEMA_05810 PF01476 LysM domain THEMA_05810 PF03734 L,D-transpeptidase catalytic domain THEMA_05815 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THEMA_05815 PF00013 KH domain THEMA_05815 PF00575 S1 RNA binding domain THEMA_05815 PF03725 3' exoribonuclease family, domain 2 THEMA_05815 PF01138 3' exoribonuclease family, domain 1 THEMA_05820 PF01197 Ribosomal protein L31 THEMA_05825 PF00313 'Cold-shock' DNA-binding domain THEMA_05830 PF00072 Response regulator receiver domain THEMA_05850 PF01966 HD domain THEMA_05850 PF11871 Domain of unknown function (DUF3391) THEMA_05880 PF01312 FlhB HrpN YscU SpaS Family THEMA_05910 PF01261 Xylose isomerase-like TIM barrel THEMA_05915 PF01546 Peptidase family M20/M25/M40 THEMA_05915 PF07687 Peptidase dimerisation domain THEMA_05925 PF05175 Methyltransferase small domain THEMA_05930 PF00005 ABC transporter THEMA_05935 PF01975 Survival protein SurE THEMA_05940 PF01327 Polypeptide deformylase THEMA_05955 PF02772 S-adenosylmethionine synthetase, central domain THEMA_05955 PF00438 S-adenosylmethionine synthetase, N-terminal domain THEMA_05955 PF02773 S-adenosylmethionine synthetase, C-terminal domain THEMA_05960 PF01649 Ribosomal protein S20 THEMA_05970 PF00486 Transcriptional regulatory protein, C terminal THEMA_05970 PF00072 Response regulator receiver domain THEMA_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_05975 PF00512 His Kinase A (phospho-acceptor) domain THEMA_05975 PF00989 PAS fold THEMA_05975 PF16736 Single Cache-like THEMA_05980 PF02885 Glycosyl transferase family, helical bundle domain THEMA_05980 PF00591 Glycosyl transferase family, a/b domain THEMA_05980 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain THEMA_05990 PF00009 Elongation factor Tu GTP binding domain THEMA_05990 PF03764 Elongation factor G, domain IV THEMA_05990 PF14492 Elongation Factor G, domain II THEMA_05990 PF00679 Elongation factor G C-terminus THEMA_05995 PF00128 Alpha amylase, catalytic domain THEMA_06005 PF01966 HD domain THEMA_06020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain THEMA_06020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain THEMA_06025 PF02445 Quinolinate synthetase A protein THEMA_06030 PF01958 Domain of unknown function DUF108 THEMA_06030 PF03447 Homoserine dehydrogenase, NAD binding domain THEMA_06035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THEMA_06035 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain THEMA_06035 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain THEMA_06035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THEMA_06040 PF00186 Dihydrofolate reductase THEMA_06045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEMA_06045 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_06050 PF00175 Oxidoreductase NAD-binding domain THEMA_06050 PF00970 Oxidoreductase FAD-binding domain THEMA_06050 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B THEMA_06055 PF00005 ABC transporter THEMA_06065 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system THEMA_06070 PF12320 Type 5 capsule protein repressor C-terminal domain THEMA_06070 PF00149 Calcineurin-like phosphoesterase THEMA_06080 PF02190 ATP-dependent protease La (LON) substrate-binding domain THEMA_06080 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_06080 PF05362 Lon protease (S16) C-terminal proteolytic domain THEMA_06085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE THEMA_06100 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_06100 PF12804 MobA-like NTP transferase domain THEMA_06100 PF14602 Hexapeptide repeat of succinyl-transferase THEMA_06105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase THEMA_06105 PF14572 Phosphoribosyl synthetase-associated domain THEMA_06110 PF01386 Ribosomal L25p family THEMA_06110 PF14693 Ribosomal protein TL5, C-terminal domain THEMA_06115 PF01195 Peptidyl-tRNA hydrolase THEMA_06125 PF02929 Beta galactosidase small chain THEMA_06125 PF16353 Domain of unknown function(DUF4981) THEMA_06125 PF00703 Glycosyl hydrolases family 2 THEMA_06125 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THEMA_06125 PF02837 Glycosyl hydrolases family 2, sugar binding domain THEMA_06130 PF00679 Elongation factor G C-terminus THEMA_06130 PF00009 Elongation factor Tu GTP binding domain THEMA_06130 PF06421 GTP-binding protein LepA C-terminus THEMA_06130 PF03144 Elongation factor Tu domain 2 THEMA_06140 PF03009 Glycerophosphoryl diester phosphodiesterase family THEMA_06145 PF02627 Carboxymuconolactone decarboxylase family THEMA_06150 PF01612 3'-5' exonuclease THEMA_06150 PF00476 DNA polymerase family A THEMA_06150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain THEMA_06150 PF01367 5'-3' exonuclease, C-terminal SAM fold THEMA_06155 PF13690 Chemotaxis phosphatase CheX THEMA_06170 PF00119 ATP synthase A chain THEMA_06175 PF00137 ATP synthase subunit C THEMA_06180 PF00430 ATP synthase B/B' CF(0) THEMA_06185 PF00213 ATP synthase delta (OSCP) subunit THEMA_06190 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEMA_06190 PF00306 ATP synthase alpha/beta chain, C terminal domain THEMA_06190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_06195 PF00231 ATP synthase THEMA_06200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_06200 PF02874 ATP synthase alpha/beta family, beta-barrel domain THEMA_06205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain THEMA_06210 PF02645 Uncharacterised protein, DegV family COG1307 THEMA_06215 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein THEMA_06215 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus THEMA_06220 PF10150 Ribonuclease E/G family THEMA_06220 PF00575 S1 RNA binding domain THEMA_06225 PF00889 Elongation factor TS THEMA_06230 PF00696 Amino acid kinase family THEMA_06235 PF07690 Major Facilitator Superfamily THEMA_06240 PF08279 HTH domain THEMA_06240 PF02829 3H domain THEMA_06245 PF04055 Radical SAM superfamily THEMA_06245 PF18693 TRAM domain THEMA_06245 PF00919 Uncharacterized protein family UPF0004 THEMA_06260 PF04542 Sigma-70 region 2 THEMA_06260 PF08281 Sigma-70, region 4 THEMA_06265 PF01168 Alanine racemase, N-terminal domain THEMA_06270 PF01048 Phosphorylase superfamily THEMA_06275 PF01368 DHH family THEMA_06275 PF02272 DHHA1 domain THEMA_06290 PF10609 NUBPL iron-transfer P-loop NTPase THEMA_06295 PF00453 Ribosomal protein L20 THEMA_06300 PF01632 Ribosomal protein L35 THEMA_06305 PF00707 Translation initiation factor IF-3, C-terminal domain THEMA_06305 PF05198 Translation initiation factor IF-3, N-terminal domain THEMA_06340 PF00990 Diguanylate cyclase, GGDEF domain THEMA_06355 PF13660 Domain of unknown function (DUF4147) THEMA_06355 PF05161 MOFRL family THEMA_06360 PF00156 Phosphoribosyl transferase domain THEMA_06380 PF00158 Sigma-54 interaction domain THEMA_06380 PF00072 Response regulator receiver domain THEMA_06380 PF02954 Bacterial regulatory protein, Fis family THEMA_06385 PF03462 PCRF domain THEMA_06385 PF00472 RF-1 domain THEMA_06390 PF07516 SecA Wing and Scaffold domain THEMA_06390 PF00271 Helicase conserved C-terminal domain THEMA_06390 PF01043 SecA preprotein cross-linking domain THEMA_06390 PF07517 SecA DEAD-like domain THEMA_06400 PF01728 FtsJ-like methyltransferase THEMA_06400 PF01479 S4 domain THEMA_06410 PF01416 tRNA pseudouridine synthase THEMA_06420 PF10502 Signal peptidase, peptidase S26 THEMA_06425 PF01245 Ribosomal protein L19 THEMA_06430 PF09936 SAM-dependent RNA methyltransferase THEMA_06435 PF01746 tRNA (Guanine-1)-methyltransferase THEMA_06440 PF01782 RimM N-terminal domain THEMA_06440 PF05239 PRC-barrel domain THEMA_06450 PF00886 Ribosomal protein S16 THEMA_06455 PF00448 SRP54-type protein, GTPase domain THEMA_06455 PF02978 Signal peptide binding domain THEMA_06455 PF02881 SRP54-type protein, helical bundle domain THEMA_06460 PF00708 Acylphosphatase THEMA_06475 PF01702 Queuine tRNA-ribosyltransferase THEMA_06485 PF01791 DeoC/LacD family aldolase THEMA_06495 PF04002 RadC-like JAB domain THEMA_06500 PF02545 Maf-like protein THEMA_06515 PF02424 ApbE family THEMA_06525 PF01871 AMMECR1 THEMA_06530 PF07136 Protein of unknown function (DUF1385) THEMA_06535 PF00953 Glycosyl transferase family 4 THEMA_06540 PF02719 Polysaccharide biosynthesis protein THEMA_06545 PF01966 HD domain THEMA_06550 PF02272 DHHA1 domain THEMA_06550 PF17768 RecJ OB domain THEMA_06550 PF10141 Single-strand DNA-specific exonuclease, C terminal domain THEMA_06550 PF01368 DHH family THEMA_06555 PF03652 Holliday junction resolvase THEMA_06570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_06570 PF00460 Flagella basal body rod protein THEMA_06575 PF00460 Flagella basal body rod protein THEMA_06575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_06585 PF02107 Flagellar L-ring protein THEMA_06590 PF02119 Flagellar P-ring protein THEMA_06600 PF02310 B12 binding domain THEMA_06600 PF04055 Radical SAM superfamily THEMA_06610 PF00348 Polyprenyl synthetase THEMA_06630 PF00766 Electron transfer flavoprotein FAD-binding domain THEMA_06630 PF01012 Electron transfer flavoprotein domain THEMA_06635 PF01012 Electron transfer flavoprotein domain THEMA_06650 PF01040 UbiA prenyltransferase family THEMA_06655 PF02082 Transcriptional regulator THEMA_06685 PF01118 Semialdehyde dehydrogenase, NAD binding domain THEMA_06685 PF02774 Semialdehyde dehydrogenase, dimerisation domain THEMA_06690 PF01678 Diaminopimelate epimerase THEMA_06695 PF00701 Dihydrodipicolinate synthetase family THEMA_06700 PF05173 Dihydrodipicolinate reductase, C-terminus THEMA_06700 PF01113 Dihydrodipicolinate reductase, N-terminus THEMA_06705 PF14602 Hexapeptide repeat of succinyl-transferase THEMA_06705 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal THEMA_06705 PF00132 Bacterial transferase hexapeptide (six repeats) THEMA_06710 PF00696 Amino acid kinase family THEMA_06710 PF01842 ACT domain THEMA_06710 PF13840 ACT domain THEMA_06715 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain THEMA_06715 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain THEMA_06720 PF01546 Peptidase family M20/M25/M40 THEMA_06720 PF07687 Peptidase dimerisation domain THEMA_06735 PF05636 HIGH Nucleotidyl Transferase THEMA_06740 PF01189 16S rRNA methyltransferase RsmB/F THEMA_06740 PF01029 NusB family THEMA_06745 PF04298 Putative neutral zinc metallopeptidase THEMA_06755 PF02130 Uncharacterized protein family UPF0054 THEMA_06760 PF07698 7TM receptor with intracellular HD hydrolase THEMA_06760 PF07697 7TM-HD extracellular THEMA_06760 PF01966 HD domain THEMA_06765 PF02562 PhoH-like protein THEMA_06775 PF00164 Ribosomal protein S12/S23 THEMA_06780 PF00177 Ribosomal protein S7p/S5e THEMA_06785 PF03144 Elongation factor Tu domain 2 THEMA_06785 PF00679 Elongation factor G C-terminus THEMA_06785 PF03764 Elongation factor G, domain IV THEMA_06785 PF00009 Elongation factor Tu GTP binding domain THEMA_06785 PF14492 Elongation Factor G, domain II THEMA_06790 PF00009 Elongation factor Tu GTP binding domain THEMA_06790 PF03143 Elongation factor Tu C-terminal domain THEMA_06790 PF03144 Elongation factor Tu domain 2 THEMA_06795 PF00338 Ribosomal protein S10p/S20e THEMA_06800 PF00297 Ribosomal protein L3 THEMA_06805 PF00573 Ribosomal protein L4/L1 family THEMA_06810 PF00276 Ribosomal protein L23 THEMA_06815 PF03947 Ribosomal Proteins L2, C-terminal domain THEMA_06815 PF00181 Ribosomal Proteins L2, RNA binding domain THEMA_06820 PF00203 Ribosomal protein S19 THEMA_06825 PF00237 Ribosomal protein L22p/L17e THEMA_06830 PF07650 KH domain THEMA_06830 PF00189 Ribosomal protein S3, C-terminal domain THEMA_06835 PF00252 Ribosomal protein L16p/L10e THEMA_06840 PF00831 Ribosomal L29 protein THEMA_06845 PF00366 Ribosomal protein S17 THEMA_06850 PF00238 Ribosomal protein L14p/L23e THEMA_06855 PF00467 KOW motif THEMA_06855 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 THEMA_06860 PF00673 ribosomal L5P family C-terminus THEMA_06860 PF00281 Ribosomal protein L5 THEMA_06865 PF00253 Ribosomal protein S14p/S29e THEMA_06870 PF00410 Ribosomal protein S8 THEMA_06875 PF00347 Ribosomal protein L6 THEMA_06880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast THEMA_06885 PF00333 Ribosomal protein S5, N-terminal domain THEMA_06885 PF03719 Ribosomal protein S5, C-terminal domain THEMA_06890 PF00327 Ribosomal protein L30p/L7e THEMA_06895 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A THEMA_06900 PF00344 SecY translocase THEMA_06905 PF05191 Adenylate kinase, active site lid THEMA_06910 PF00557 Metallopeptidase family M24 THEMA_06915 PF01176 Translation initiation factor 1A / IF-1 THEMA_06920 PF00444 Ribosomal protein L36 THEMA_06925 PF00416 Ribosomal protein S13/S18 THEMA_06930 PF00411 Ribosomal protein S11 THEMA_06935 PF00163 Ribosomal protein S4/S9 N-terminal domain THEMA_06935 PF01479 S4 domain THEMA_06940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain THEMA_06940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain THEMA_06940 PF01000 RNA polymerase Rpb3/RpoA insert domain THEMA_06945 PF01196 Ribosomal protein L17 THEMA_06950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain THEMA_06950 PF07498 Rho termination factor, N-terminal domain THEMA_06950 PF07497 Rho termination factor, RNA-binding domain THEMA_06955 PF00480 ROK family THEMA_06960 PF02645 Uncharacterised protein, DegV family COG1307 THEMA_06965 PF17248 Family of unknown function (DUF5317) THEMA_06970 PF00072 Response regulator receiver domain THEMA_06980 PF01926 50S ribosome-binding GTPase THEMA_06985 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP THEMA_06985 PF12557 Cob(I)alamin adenosyltransferase N terminal THEMA_06990 PF04227 Indigoidine synthase A like protein THEMA_06995 PF00468 Ribosomal protein L34 THEMA_07000 PF00825 Ribonuclease P THEMA_07005 PF01809 Putative membrane protein insertion efficiency factor THEMA_07010 PF02096 60Kd inner membrane protein THEMA_07025 PF00829 Ribosomal prokaryotic L21 protein THEMA_07035 PF01016 Ribosomal L27 protein THEMA_07040 PF12822 ECF transporter, substrate-specific component THEMA_07045 PF00572 Ribosomal protein L13 THEMA_07050 PF00380 Ribosomal protein S9/S16 THEMA_07055 PF01807 CHC2 zinc finger THEMA_07055 PF08275 DNA primase catalytic core, N-terminal domain THEMA_07060 PF00140 Sigma-70 factor, region 1.2 THEMA_07060 PF04542 Sigma-70 region 2 THEMA_07060 PF04539 Sigma-70 region 3 THEMA_07060 PF04545 Sigma-70, region 4 THEMA_07060 PF03979 Sigma-70 factor, region 1.1 THEMA_07065 PF00271 Helicase conserved C-terminal domain THEMA_07065 PF00270 DEAD/DEAH box helicase THEMA_07065 PF17757 UvrB interaction domain THEMA_07065 PF03461 TRCF domain THEMA_07065 PF02559 CarD-like/TRCF domain THEMA_07080 PF02660 Glycerol-3-phosphate acyltransferase THEMA_07085 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal THEMA_07085 PF01926 50S ribosome-binding GTPase THEMA_07090 PF00575 S1 RNA binding domain THEMA_07095 PF02401 LytB protein THEMA_07100 PF02224 Cytidylate kinase THEMA_07105 PF01740 STAS domain THEMA_07110 PF02938 GAD domain THEMA_07110 PF00152 tRNA synthetases class II (D, K and N) THEMA_07110 PF01336 OB-fold nucleic acid binding domain THEMA_07115 PF01008 Initiation factor 2 subunit family THEMA_07115 PF03061 Thioesterase superfamily THEMA_07125 PF09210 Domain of unknown function (DUF1957) THEMA_07125 PF03065 Glycosyl hydrolase family 57 THEMA_07130 PF00398 Ribosomal RNA adenine dimethylase THEMA_07150 PF04324 BFD-like [2Fe-2S] binding domain THEMA_07150 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_07155 PF04324 BFD-like [2Fe-2S] binding domain THEMA_07155 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_07160 PF04309 Glycerol-3-phosphate responsive antiterminator THEMA_07170 PF00230 Major intrinsic protein THEMA_07175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_07175 PF00672 HAMP domain THEMA_07175 PF17200 Single Cache domain 2 THEMA_07180 PF06971 Putative DNA-binding protein N-terminus THEMA_07180 PF02629 CoA binding domain THEMA_07185 PF00037 4Fe-4S binding domain THEMA_07185 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region THEMA_07185 PF02906 Iron only hydrogenase large subunit, C-terminal domain THEMA_07185 PF02256 Iron hydrogenase small subunit THEMA_07190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region THEMA_07190 PF00037 4Fe-4S binding domain THEMA_07190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit THEMA_07225 PF00483 Nucleotidyl transferase THEMA_07225 PF01066 CDP-alcohol phosphatidyltransferase THEMA_07230 PF00005 ABC transporter THEMA_07235 PF01458 Uncharacterized protein family (UPF0051) THEMA_07245 PF00459 Inositol monophosphatase family THEMA_07250 PF00251 Glycosyl hydrolases family 32 N-terminal domain THEMA_07250 PF08244 Glycosyl hydrolases family 32 C terminal THEMA_07265 PF03537 Glycoside-hydrolase family GH114 THEMA_07290 PF00534 Glycosyl transferases group 1 THEMA_07290 PF13439 Glycosyltransferase Family 4 THEMA_07295 PF01061 ABC-2 type transporter THEMA_07300 PF13732 Domain of unknown function (DUF4162) THEMA_07300 PF00005 ABC transporter THEMA_07310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THEMA_07310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain THEMA_07315 PF00266 Aminotransferase class-V THEMA_07320 PF01765 Ribosome recycling factor THEMA_07325 PF01255 Putative undecaprenyl diphosphate synthase THEMA_07335 PF02272 DHHA1 domain THEMA_07335 PF01411 tRNA synthetases class II (A) THEMA_07335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain THEMA_07345 PF01430 Hsp33 protein THEMA_07350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase THEMA_07360 PF10431 C-terminal, D2-small domain, of ClpB protein THEMA_07360 PF02861 Clp amino terminal domain, pathogenicity island component THEMA_07360 PF07724 AAA domain (Cdc48 subfamily) THEMA_07360 PF00004 ATPase family associated with various cellular activities (AAA) THEMA_07360 PF17871 AAA lid domain THEMA_07390 PF01121 Dephospho-CoA kinase THEMA_07400 PF00342 Phosphoglucose isomerase THEMA_07405 PF00156 Phosphoribosyl transferase domain THEMA_07410 PF00288 GHMP kinases N terminal domain THEMA_07425 PF04452 RNA methyltransferase THEMA_07430 PF02403 Seryl-tRNA synthetase N-terminal domain THEMA_07430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) THEMA_07435 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_07440 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_07445 PF08402 TOBE domain THEMA_07445 PF00005 ABC transporter THEMA_07450 PF13416 Bacterial extracellular solute-binding protein THEMA_07465 PF00300 Histidine phosphatase superfamily (branch 1) THEMA_07475 PF01592 NifU-like N terminal domain THEMA_07480 PF00266 Aminotransferase class-V THEMA_07485 PF01458 Uncharacterized protein family (UPF0051) THEMA_07490 PF01458 Uncharacterized protein family (UPF0051) THEMA_07495 PF00005 ABC transporter THEMA_07510 PF02049 Flagellar hook-basal body complex protein FliE THEMA_07515 PF00460 Flagella basal body rod protein THEMA_07515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal THEMA_07520 PF00460 Flagella basal body rod protein THEMA_07525 PF03462 PCRF domain THEMA_07525 PF00472 RF-1 domain THEMA_07530 PF00437 Type II/IV secretion system protein THEMA_07535 PF06827 Zinc finger found in FPG and IleRS THEMA_07535 PF00133 tRNA synthetases class I (I, L, M and V) THEMA_07535 PF08264 Anticodon-binding domain of tRNA THEMA_07540 PF00486 Transcriptional regulatory protein, C terminal THEMA_07540 PF00072 Response regulator receiver domain THEMA_07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_07545 PF00989 PAS fold THEMA_07545 PF00512 His Kinase A (phospho-acceptor) domain THEMA_07555 PF01139 tRNA-splicing ligase RtcB THEMA_07570 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_07570 PF00571 CBS domain THEMA_07585 PF00749 tRNA synthetases class I (E and Q), catalytic domain THEMA_07590 PF12146 Serine aminopeptidase, S33 THEMA_07595 PF01594 AI-2E family transporter THEMA_07605 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_07605 PF00571 CBS domain THEMA_07610 PF05193 Peptidase M16 inactive domain THEMA_07610 PF00675 Insulinase (Peptidase family M16) THEMA_07615 PF00575 S1 RNA binding domain THEMA_07615 PF01138 3' exoribonuclease family, domain 1 THEMA_07615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain THEMA_07615 PF00013 KH domain THEMA_07615 PF03725 3' exoribonuclease family, domain 2 THEMA_07620 PF00312 Ribosomal protein S15 THEMA_07645 PF00355 Rieske [2Fe-2S] domain THEMA_07705 PF00005 ABC transporter THEMA_07705 PF00664 ABC transporter transmembrane region THEMA_07710 PF00005 ABC transporter THEMA_07720 PF04055 Radical SAM superfamily THEMA_07720 PF06463 Molybdenum Cofactor Synthesis C THEMA_07725 PF04055 Radical SAM superfamily THEMA_07725 PF13186 Iron-sulfur cluster-binding domain THEMA_07740 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEMA_07750 PF00664 ABC transporter transmembrane region THEMA_07750 PF00005 ABC transporter THEMA_07755 PF00005 ABC transporter THEMA_07755 PF00664 ABC transporter transmembrane region THEMA_07775 PF00931 NB-ARC domain THEMA_07775 PF13176 Tetratricopeptide repeat THEMA_07780 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system THEMA_07795 PF00005 ABC transporter THEMA_07795 PF00664 ABC transporter transmembrane region THEMA_07830 PF00005 ABC transporter THEMA_07850 PF00248 Aldo/keto reductase family THEMA_07860 PF00753 Metallo-beta-lactamase superfamily THEMA_07860 PF16123 Hydroxyacylglutathione hydrolase C-terminus THEMA_07870 PF01209 ubiE/COQ5 methyltransferase family THEMA_07875 PF10609 NUBPL iron-transfer P-loop NTPase THEMA_07880 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain THEMA_07895 PF01018 GTP1/OBG THEMA_07895 PF01926 50S ribosome-binding GTPase THEMA_07895 PF04055 Radical SAM superfamily THEMA_07900 PF07883 Cupin domain THEMA_07905 PF08267 Cobalamin-independent synthase, N-terminal domain THEMA_07905 PF01717 Cobalamin-independent synthase, Catalytic domain THEMA_07915 PF00355 Rieske [2Fe-2S] domain THEMA_07920 PF02660 Glycerol-3-phosphate acyltransferase THEMA_07930 PF02056 Family 4 glycosyl hydrolase THEMA_07930 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_07945 PF00488 MutS domain V THEMA_07945 PF01713 Smr domain THEMA_07950 PF02491 SHS2 domain inserted in FTSA THEMA_07955 PF03459 TOBE domain THEMA_07955 PF17912 MalK OB fold domain THEMA_07955 PF00005 ABC transporter THEMA_07970 PF02934 GatB/GatE catalytic domain THEMA_07970 PF02637 GatB domain THEMA_07975 PF01425 Amidase THEMA_07980 PF00114 Pilin (bacterial filament) THEMA_07980 PF07963 Prokaryotic N-terminal methylation motif THEMA_07985 PF01053 Cys/Met metabolism PLP-dependent enzyme THEMA_07990 PF04055 Radical SAM superfamily THEMA_07990 PF06968 Biotin and Thiamin Synthesis associated domain THEMA_08015 PF12849 PBP superfamily domain THEMA_08025 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08030 PF00005 ABC transporter THEMA_08035 PF01895 PhoU domain THEMA_08040 PF00486 Transcriptional regulatory protein, C terminal THEMA_08040 PF00072 Response regulator receiver domain THEMA_08045 PF00512 His Kinase A (phospho-acceptor) domain THEMA_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase THEMA_08055 PF00664 ABC transporter transmembrane region THEMA_08055 PF00005 ABC transporter THEMA_08060 PF00155 Aminotransferase class I and II THEMA_08065 PF13419 Haloacid dehalogenase-like hydrolase THEMA_08070 PF02540 NAD synthase THEMA_08070 PF00795 Carbon-nitrogen hydrolase THEMA_08080 PF02769 AIR synthase related protein, C-terminal domain THEMA_08080 PF00586 AIR synthase related protein, N-terminal domain THEMA_08085 PF02843 Phosphoribosylglycinamide synthetase, C domain THEMA_08085 PF02844 Phosphoribosylglycinamide synthetase, N domain THEMA_08085 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain THEMA_08090 PF02142 MGS-like domain THEMA_08090 PF01808 AICARFT/IMPCHase bienzyme THEMA_08095 PF00551 Formyl transferase THEMA_08100 PF00156 Phosphoribosyl transferase domain THEMA_08105 PF00586 AIR synthase related protein, N-terminal domain THEMA_08105 PF02769 AIR synthase related protein, C-terminal domain THEMA_08105 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain THEMA_08105 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus THEMA_08115 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase THEMA_08120 PF01259 SAICAR synthetase THEMA_08135 PF01926 50S ribosome-binding GTPase THEMA_08135 PF06071 Protein of unknown function (DUF933) THEMA_08145 PF00580 UvrD/REP helicase N-terminal domain THEMA_08145 PF13361 UvrD-like helicase C-terminal domain THEMA_08160 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08165 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08170 PF00005 ABC transporter THEMA_08170 PF08402 TOBE domain THEMA_08175 PF01074 Glycosyl hydrolases family 38 N-terminal domain THEMA_08175 PF07748 Glycosyl hydrolases family 38 C-terminal domain THEMA_08175 PF09261 Alpha mannosidase middle domain THEMA_08180 PF00534 Glycosyl transferases group 1 THEMA_08185 PF00535 Glycosyl transferase family 2 THEMA_08190 PF01380 SIS domain THEMA_08190 PF01418 Helix-turn-helix domain, rpiR family THEMA_08200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_08205 PF04041 beta-1,4-mannooligosaccharide phosphorylase THEMA_08210 PF00480 ROK family THEMA_08210 PF01325 Iron dependent repressor, N-terminal DNA binding domain THEMA_08215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_08220 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08225 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_08225 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_08230 PF00005 ABC transporter THEMA_08235 PF00005 ABC transporter THEMA_08235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_08245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster THEMA_08245 PF07992 Pyridine nucleotide-disulphide oxidoreductase THEMA_08250 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEMA_08255 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit THEMA_08255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit THEMA_08260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit THEMA_08270 PF00361 Proton-conducting membrane transporter THEMA_08275 PF00361 Proton-conducting membrane transporter THEMA_08280 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L THEMA_08285 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus THEMA_08285 PF00361 Proton-conducting membrane transporter THEMA_08285 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter THEMA_08285 PF13244 Domain of unknown function (DUF4040) THEMA_08300 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) THEMA_08305 PF01899 Na+/H+ ion antiporter subunit THEMA_08310 PF01547 Bacterial extracellular solute-binding protein THEMA_08315 PF14785 Maltose transport system permease protein MalF P2 domain THEMA_08315 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08320 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08325 PF07745 Glycosyl hydrolase family 53 THEMA_08340 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08345 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08345 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_08350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_08350 PF00005 ABC transporter THEMA_08355 PF02449 Beta-galactosidase THEMA_08355 PF08532 Beta-galactosidase trimerisation domain THEMA_08355 PF08533 Beta-galactosidase C-terminal domain THEMA_08360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_08360 PF00005 ABC transporter THEMA_08365 PF02837 Glycosyl hydrolases family 2, sugar binding domain THEMA_08365 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THEMA_08365 PF00703 Glycosyl hydrolases family 2 THEMA_08365 PF16353 Domain of unknown function(DUF4981) THEMA_08365 PF02929 Beta galactosidase small chain THEMA_08375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain THEMA_08375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain THEMA_08380 PF08544 GHMP kinases C terminal THEMA_08380 PF00288 GHMP kinases N terminal domain THEMA_08380 PF10509 Galactokinase galactose-binding signature THEMA_08400 PF01594 AI-2E family transporter THEMA_08410 PF02142 MGS-like domain THEMA_08415 PF03707 Bacterial signalling protein N terminal repeat THEMA_08415 PF00990 Diguanylate cyclase, GGDEF domain THEMA_08415 PF00563 EAL domain THEMA_08420 PF00248 Aldo/keto reductase family THEMA_08425 PF06470 SMC proteins Flexible Hinge Domain THEMA_08425 PF02463 RecF/RecN/SMC N terminal domain THEMA_08430 PF00293 NUDIX domain THEMA_08440 PF02561 Flagellar protein FliS THEMA_08445 PF00583 Acetyltransferase (GNAT) family THEMA_08450 PF13419 Haloacid dehalogenase-like hydrolase THEMA_08475 PF03063 Prismane/CO dehydrogenase family THEMA_08485 PF00072 Response regulator receiver domain THEMA_08495 PF11897 Protein of unknown function (DUF3417) THEMA_08495 PF00343 Carbohydrate phosphorylase THEMA_08505 PF04055 Radical SAM superfamily THEMA_08505 PF06969 HemN C-terminal domain THEMA_08510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain THEMA_08520 PF17155 Gammaproteobacterial periplasmic sensor domain THEMA_08520 PF00990 Diguanylate cyclase, GGDEF domain THEMA_08525 PF12706 Beta-lactamase superfamily domain THEMA_08530 PF01769 Divalent cation transporter THEMA_08530 PF00571 CBS domain THEMA_08530 PF03448 MgtE intracellular N domain THEMA_08550 PF00117 Glutamine amidotransferase class-I THEMA_08560 PF04024 PspC domain THEMA_08565 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain THEMA_08565 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain THEMA_08570 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase THEMA_08575 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_08575 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08580 PF00005 ABC transporter THEMA_08580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_08590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_08600 PF00180 Isocitrate/isopropylmalate dehydrogenase THEMA_08605 PF00072 Response regulator receiver domain THEMA_08605 PF01966 HD domain THEMA_08610 PF00672 HAMP domain THEMA_08610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_08620 PF01966 HD domain THEMA_08620 PF00072 Response regulator receiver domain THEMA_08630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_08640 PF02683 Cytochrome C biogenesis protein transmembrane region THEMA_08645 PF00571 CBS domain THEMA_08645 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_08650 PF00005 ABC transporter THEMA_08655 PF12399 Branched-chain amino acid ATP-binding cassette transporter THEMA_08655 PF00005 ABC transporter THEMA_08660 PF02653 Branched-chain amino acid transport system / permease component THEMA_08660 PF11862 Domain of unknown function (DUF3382) THEMA_08665 PF02653 Branched-chain amino acid transport system / permease component THEMA_08685 PF07726 ATPase family associated with various cellular activities (AAA) THEMA_08685 PF17863 AAA lid domain THEMA_08690 PF00155 Aminotransferase class I and II THEMA_08695 PF01515 Phosphate acetyl/butaryl transferase THEMA_08700 PF01048 Phosphorylase superfamily THEMA_08705 PF00210 Ferritin-like domain THEMA_08730 PF02465 Flagellar hook-associated protein 2 N-terminus THEMA_08730 PF07195 Flagellar hook-associated protein 2 C-terminus THEMA_08730 PF07196 Flagellin hook IN motif THEMA_08735 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08740 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_08745 PF13416 Bacterial extracellular solute-binding protein THEMA_08835 PF00035 Double-stranded RNA binding motif THEMA_08835 PF14622 Ribonuclease-III-like THEMA_08840 PF12850 Calcineurin-like phosphoesterase superfamily domain THEMA_08850 PF02223 Thymidylate kinase THEMA_08860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain THEMA_08860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain THEMA_08865 PF00709 Adenylosuccinate synthetase THEMA_08870 PF00206 Lyase THEMA_08870 PF10397 Adenylosuccinate lyase C-terminus THEMA_08880 PF05958 tRNA (Uracil-5-)-methyltransferase THEMA_08885 PF03485 Arginyl tRNA synthetase N terminal domain THEMA_08885 PF05746 DALR anticodon binding domain THEMA_08885 PF00750 tRNA synthetases class I (R) THEMA_08900 PF13393 Histidyl-tRNA synthetase THEMA_08900 PF03129 Anticodon binding domain THEMA_08905 PF02386 Cation transport protein THEMA_08915 PF02080 TrkA-C domain THEMA_08915 PF02254 TrkA-N domain THEMA_08930 PF09334 tRNA synthetases class I (M) THEMA_08930 PF01588 Putative tRNA binding domain THEMA_08930 PF08264 Anticodon-binding domain of tRNA THEMA_08935 PF03989 DNA gyrase C-terminal domain, beta-propeller THEMA_08935 PF00521 DNA gyrase/topoisomerase IV, subunit A THEMA_08940 PF01951 Archease protein family (MTH1598/TM1083) THEMA_08945 PF01726 LexA DNA binding domain THEMA_08945 PF00717 Peptidase S24-like THEMA_08950 PF01740 STAS domain THEMA_08955 PF02502 Ribose/Galactose Isomerase THEMA_08970 PF02569 Pantoate-beta-alanine ligase THEMA_08995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_08995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_09005 PF01261 Xylose isomerase-like TIM barrel THEMA_09015 PF00455 DeoR C terminal sensor domain THEMA_09015 PF08220 DeoR-like helix-turn-helix domain THEMA_09020 PF11975 Family 4 glycosyl hydrolase C-terminal domain THEMA_09020 PF02056 Family 4 glycosyl hydrolase THEMA_09025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle THEMA_09030 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_09035 PF12911 N-terminal TM domain of oligopeptide transport permease C THEMA_09035 PF00528 Binding-protein-dependent transport system inner membrane component THEMA_09040 PF00005 ABC transporter THEMA_09040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_09045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region THEMA_09045 PF00005 ABC transporter THEMA_09050 PF02837 Glycosyl hydrolases family 2, sugar binding domain THEMA_09050 PF00703 Glycosyl hydrolases family 2 THEMA_09050 PF02836 Glycosyl hydrolases family 2, TIM barrel domain THEMA_09065 PF04232 Stage V sporulation protein S (SpoVS) THEMA_09075 PF02254 TrkA-N domain THEMA_09075 PF07885 Ion channel THEMA_09080 PF03091 CutA1 divalent ion tolerance protein THEMA_09090 PF00005 ABC transporter THEMA_09100 PF10531 SLBB domain THEMA_09110 PF05343 M42 glutamyl aminopeptidase THEMA_09115 PF05343 M42 glutamyl aminopeptidase THEMA_09120 PF05343 M42 glutamyl aminopeptidase THEMA_09125 PF03775 Septum formation inhibitor MinC, C-terminal domain THEMA_09135 PF03600 Citrate transporter THEMA_09140 PF12323 Helix-turn-helix domain THEMA_09140 PF07282 Putative transposase DNA-binding domain THEMA_09140 PF01385 Probable transposase THEMA_09145 PF13393 Histidyl-tRNA synthetase THEMA_09150 PF01634 ATP phosphoribosyltransferase THEMA_09155 PF00815 Histidinol dehydrogenase THEMA_09160 PF00155 Aminotransferase class I and II THEMA_09165 PF00475 Imidazoleglycerol-phosphate dehydratase THEMA_09170 PF00117 Glutamine amidotransferase class-I THEMA_09175 PF00977 Histidine biosynthesis protein THEMA_09180 PF00977 Histidine biosynthesis protein THEMA_09185 PF01502 Phosphoribosyl-AMP cyclohydrolase THEMA_09185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase THEMA_09190 PF02350 UDP-N-acetylglucosamine 2-epimerase THEMA_09195 PF01050 Mannose-6-phosphate isomerase THEMA_09195 PF00483 Nucleotidyl transferase THEMA_09205 PF00462 Glutaredoxin THEMA_09220 PF00005 ABC transporter THEMA_09220 PF13732 Domain of unknown function (DUF4162) THEMA_09250 PF12146 Serine aminopeptidase, S33 THEMA_09255 PF07690 Major Facilitator Superfamily THEMA_09280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain THEMA_09280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase THEMA_09310 PF00248 Aldo/keto reductase family THEMA_09320 PF00248 Aldo/keto reductase family THEMA_09325 PF12833 Helix-turn-helix domain THEMA_09325 PF06719 AraC-type transcriptional regulator N-terminus THEMA_09355 PF05168 HEPN domain THEMA_09400 PF00271 Helicase conserved C-terminal domain THEMA_09400 PF00176 SNF2 family N-terminal domain THEMA_09420 PF06672 Protein of unknown function (DUF1175) THEMA_09430 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain THEMA_09430 PF00207 Alpha-2-macroglobulin family THEMA_09430 PF07678 A-macroglobulin TED domain THEMA_09430 PF01835 MG2 domain THEMA_09430 PF07703 Alpha-2-macroglobulin bait region domain THEMA_09435 PF01206 Sulfurtransferase TusA THEMA_09440 PF04143 Sulphur transport THEMA_09460 PF01206 Sulfurtransferase TusA THEMA_09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain THEMA_09485 PF00990 Diguanylate cyclase, GGDEF domain THEMA_09510 PF02899 Phage integrase, N-terminal SAM-like domain THEMA_09510 PF00589 Phage integrase family THEMA_09515 PF02540 NAD synthase THEMA_09520 PF00731 AIR carboxylase THEMA_09525 PF01969 Protein of unknown function DUF111 THEMA_09540 PF04011 LemA family THEMA_09545 PF00294 pfkB family carbohydrate kinase THEMA_09550 PF05025 RbsD / FucU transport protein family THEMA_09555 PF13407 Periplasmic binding protein domain THEMA_09565 PF00005 ABC transporter THEMA_09570 PF02653 Branched-chain amino acid transport system / permease component THEMA_09575 PF00456 Transketolase, thiamine diphosphate binding domain THEMA_09580 PF02780 Transketolase, C-terminal domain THEMA_09580 PF02779 Transketolase, pyrimidine binding domain THEMA_09585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain THEMA_09585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain THEMA_09600 PF00356 Bacterial regulatory proteins, lacI family THEMA_09630 PF03951 Glutamine synthetase, beta-Grasp domain THEMA_09630 PF00120 Glutamine synthetase, catalytic domain THEMA_09650 PF01479 S4 domain THEMA_09650 PF00849 RNA pseudouridylate synthase THEMA_09655 PF02261 Aspartate decarboxylase THEMA_09670 PF01979 Amidohydrolase family THEMA_09675 PF00478 IMP dehydrogenase / GMP reductase domain THEMA_09675 PF00571 CBS domain THEMA_09680 PF03600 Citrate transporter THEMA_09705 PF09967 VWA-like domain (DUF2201) THEMA_09705 PF13203 Putative metallopeptidase domain THEMA_09710 PF16236 Domain of unknown function (DUF4895)