locus-tag class description Tmari_0003 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Tmari_0003 PF13378 Enolase C-terminal domain-like Tmari_0005 PF04199 Putative cyclase Tmari_0007 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmari_0007 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmari_0007 PF00037 4Fe-4S binding domain Tmari_0011 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_0012 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmari_0014 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmari_0014 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmari_0015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmari_0017 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Tmari_0018 PF02641 Uncharacterized ACR, COG1993 Tmari_0019 PF08676 MutL C terminal dimerisation domain Tmari_0019 PF01119 DNA mismatch repair protein, C-terminal domain Tmari_0020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_0021 PF00722 Glycosyl hydrolases family 16 Tmari_0022 PF14310 Fibronectin type III-like domain Tmari_0022 PF00933 Glycosyl hydrolase family 3 N terminal domain Tmari_0022 PF01915 Glycosyl hydrolase family 3 C-terminal domain Tmari_0024 PF00005 ABC transporter Tmari_0024 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0025 PF00005 ABC transporter Tmari_0027 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0028 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_0029 PF00480 ROK family Tmari_0033 PF03266 NTPase Tmari_0034 PF01966 HD domain Tmari_0035 PF01242 6-pyruvoyl tetrahydropterin synthase Tmari_0036 PF02649 Type I GTP cyclohydrolase folE2 Tmari_0037 PF00809 Pterin binding enzyme Tmari_0038 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Tmari_0038 PF02152 Dihydroneopterin aldolase Tmari_0039 PF01321 Creatinase/Prolidase N-terminal domain Tmari_0039 PF00557 Metallopeptidase family M24 Tmari_0040 PF00005 ABC transporter Tmari_0040 PF00664 ABC transporter transmembrane region Tmari_0044 PF07282 Putative transposase DNA-binding domain Tmari_0044 PF01385 Probable transposase Tmari_0044 PF12323 Helix-turn-helix domain Tmari_0046 PF04015 Domain of unknown function (DUF362) Tmari_0048 PF07670 Nucleoside recognition Tmari_0048 PF07664 Ferrous iron transport protein B C terminus Tmari_0048 PF17910 FeoB cytosolic helical domain Tmari_0048 PF02421 Ferrous iron transport protein B Tmari_0048 PF04023 FeoA domain Tmari_0052 PF07477 Glycosyl hydrolase family 67 C-terminus Tmari_0052 PF07488 Glycosyl hydrolase family 67 middle domain Tmari_0052 PF03648 Glycosyl hydrolase family 67 N-terminus Tmari_0053 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_0054 PF00005 ABC transporter Tmari_0054 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0055 PF00005 ABC transporter Tmari_0056 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0056 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_0057 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0058 PF00331 Glycosyl hydrolase family 10 Tmari_0058 PF06452 Carbohydrate family 9 binding domain-like Tmari_0058 PF02018 Carbohydrate binding domain Tmari_0061 PF02614 Glucuronate isomerase Tmari_0062 PF09339 IclR helix-turn-helix domain Tmari_0062 PF01614 Bacterial transcriptional regulator Tmari_0063 PF01081 KDPG and KHG aldolase Tmari_0065 PF08125 Mannitol dehydrogenase C-terminal domain Tmari_0065 PF01232 Mannitol dehydrogenase Rossmann domain Tmari_0066 PF03786 D-mannonate dehydratase (UxuA) Tmari_0067 PF00331 Glycosyl hydrolase family 10 Tmari_0068 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_0069 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0070 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0070 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_0071 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0071 PF00005 ABC transporter Tmari_0072 PF00005 ABC transporter Tmari_0072 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0073 PF14310 Fibronectin type III-like domain Tmari_0073 PF00933 Glycosyl hydrolase family 3 N terminal domain Tmari_0073 PF01915 Glycosyl hydrolase family 3 C-terminal domain Tmari_0074 PF05448 Acetyl xylan esterase (AXE1) Tmari_0075 PF00005 ABC transporter Tmari_0076 PF01032 FecCD transport family Tmari_0077 PF01497 Periplasmic binding protein Tmari_0078 PF02623 FliW protein Tmari_0079 PF00669 Bacterial flagellin N-terminal helical region Tmari_0080 PF07196 Flagellin hook IN motif Tmari_0080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmari_0083 PF03023 Lipid II flippase MurJ Tmari_0084 PF01875 Memo-like protein Tmari_0085 PF03958 Bacterial type II/III secretion system short domain Tmari_0085 PF00263 Bacterial type II and III secretion system protein Tmari_0085 PF11741 AMIN domain Tmari_0085 PF07660 Secretin and TonB N terminus short domain Tmari_0091 PF00482 Type II secretion system (T2SS), protein F Tmari_0092 PF02915 Rubrerythrin Tmari_0093 PF01207 Dihydrouridine synthase (Dus) Tmari_0094 PF01467 Cytidylyltransferase-like Tmari_0095 PF01018 GTP1/OBG Tmari_0095 PF01926 50S ribosome-binding GTPase Tmari_0095 PF09269 Domain of unknown function (DUF1967) Tmari_0097 PF12826 Helix-hairpin-helix motif Tmari_0097 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Tmari_0097 PF03120 NAD-dependent DNA ligase OB-fold domain Tmari_0097 PF01653 NAD-dependent DNA ligase adenylation domain Tmari_0097 PF00533 BRCA1 C Terminus (BRCT) domain Tmari_0105 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tmari_0107 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tmari_0107 PF00480 ROK family Tmari_0108 PF00465 Iron-containing alcohol dehydrogenase Tmari_0109 PF02653 Branched-chain amino acid transport system / permease component Tmari_0110 PF01522 Polysaccharide deacetylase Tmari_0112 PF00005 ABC transporter Tmari_0113 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmari_0113 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmari_0116 PF00317 Ribonucleotide reductase, all-alpha domain Tmari_0116 PF02867 Ribonucleotide reductase, barrel domain Tmari_0116 PF03477 ATP cone domain Tmari_0118 PF00881 Nitroreductase family Tmari_0121 PF01297 Zinc-uptake complex component A periplasmic Tmari_0122 PF00005 ABC transporter Tmari_0123 PF00950 ABC 3 transport family Tmari_0124 PF00486 Transcriptional regulatory protein, C terminal Tmari_0124 PF00072 Response regulator receiver domain Tmari_0126 PF02436 Conserved carboxylase domain Tmari_0126 PF00364 Biotin-requiring enzyme Tmari_0126 PF00682 HMGL-like Tmari_0128 PF07690 Major Facilitator Superfamily Tmari_0130 PF00700 Bacterial flagellin C-terminal helical region Tmari_0130 PF00669 Bacterial flagellin N-terminal helical region Tmari_0131 PF00857 Isochorismatase family Tmari_0132 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0134 PF04055 Radical SAM superfamily Tmari_0135 PF00290 Tryptophan synthase alpha chain Tmari_0136 PF00291 Pyridoxal-phosphate dependent enzyme Tmari_0137 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Tmari_0138 PF00218 Indole-3-glycerol phosphate synthase Tmari_0139 PF02885 Glycosyl transferase family, helical bundle domain Tmari_0139 PF00117 Glutamine amidotransferase class-I Tmari_0139 PF00591 Glycosyl transferase family, a/b domain Tmari_0140 PF04715 Anthranilate synthase component I, N terminal region Tmari_0140 PF00425 chorismate binding enzyme Tmari_0141 PF00990 Diguanylate cyclase, GGDEF domain Tmari_0141 PF00072 Response regulator receiver domain Tmari_0143 PF00814 Glycoprotease family Tmari_0144 PF07724 AAA domain (Cdc48 subfamily) Tmari_0144 PF06689 ClpX C4-type zinc finger Tmari_0144 PF10431 C-terminal, D2-small domain, of ClpB protein Tmari_0146 PF01380 SIS domain Tmari_0147 PF02504 Fatty acid synthesis protein Tmari_0148 PF01783 Ribosomal L32p protein family Tmari_0152 PF01817 Chorismate mutase type II Tmari_0152 PF00800 Prephenate dehydratase Tmari_0152 PF01842 ACT domain Tmari_0153 PF00245 Alkaline phosphatase Tmari_0156 PF01790 Prolipoprotein diacylglyceryl transferase Tmari_0157 PF01725 Ham1 family Tmari_0159 PF00348 Polyprenyl synthetase Tmari_0163 PF01330 RuvA N terminal domain Tmari_0163 PF07499 RuvA, C-terminal domain Tmari_0164 PF08245 Mur ligase middle domain Tmari_0164 PF02875 Mur ligase family, glutamate ligase domain Tmari_0165 PF01676 Metalloenzyme superfamily Tmari_0166 PF00133 tRNA synthetases class I (I, L, M and V) Tmari_0166 PF13603 Leucyl-tRNA synthetase, Domain 2 Tmari_0166 PF08264 Anticodon-binding domain of tRNA Tmari_0166 PF09334 tRNA synthetases class I (M) Tmari_0167 PF02629 CoA binding domain Tmari_0167 PF06971 Putative DNA-binding protein N-terminus Tmari_0170 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Tmari_0170 PF05221 S-adenosyl-L-homocysteine hydrolase Tmari_0171 PF17915 Reverse gyrase zinc finger Tmari_0171 PF01751 Toprim domain Tmari_0171 PF01131 DNA topoisomerase Tmari_0171 PF00270 DEAD/DEAH box helicase Tmari_0172 PF03030 Inorganic H+ pyrophosphatase Tmari_0173 PF00550 Phosphopantetheine attachment site Tmari_0175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Tmari_0175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Tmari_0176 PF17764 3′ DNA-binding domain (3′BD) Tmari_0176 PF18074 Primosomal protein N C-terminal domain Tmari_0176 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Tmari_0176 PF04851 Type III restriction enzyme, res subunit Tmari_0180 PF04055 Radical SAM superfamily Tmari_0180 PF01938 TRAM domain Tmari_0180 PF00919 Uncharacterized protein family UPF0004 Tmari_0181 PF02540 NAD synthase Tmari_0181 PF00795 Carbon-nitrogen hydrolase Tmari_0182 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmari_0182 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmari_0182 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmari_0182 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmari_0184 PF00072 Response regulator receiver domain Tmari_0184 PF01966 HD domain Tmari_0185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_0185 PF00512 His Kinase A (phospho-acceptor) domain Tmari_0185 PF09308 LuxQ, periplasmic Tmari_0185 PF00072 Response regulator receiver domain Tmari_0186 PF01980 tRNA-methyltransferase O Tmari_0188 PF01032 FecCD transport family Tmari_0189 PF00005 ABC transporter Tmari_0190 PF04232 Stage V sporulation protein S (SpoVS) Tmari_0191 PF03649 Uncharacterised protein family (UPF0014) Tmari_0192 PF00005 ABC transporter Tmari_0193 PF02541 Ppx/GppA phosphatase family Tmari_0195 PF01171 PP-loop family Tmari_0196 PF10431 C-terminal, D2-small domain, of ClpB protein Tmari_0196 PF02861 Clp amino terminal domain, pathogenicity island component Tmari_0196 PF17871 AAA lid domain Tmari_0196 PF07724 AAA domain (Cdc48 subfamily) Tmari_0196 PF00004 ATPase family associated with various cellular activities (AAA) Tmari_0197 PF18073 Rubredoxin metal binding domain Tmari_0198 PF02457 DisA bacterial checkpoint controller nucleotide-binding Tmari_0198 PF10635 DisA bacterial checkpoint controller linker region Tmari_0198 PF00633 Helix-hairpin-helix motif Tmari_0199 PF02256 Iron hydrogenase small subunit Tmari_0199 PF02906 Iron only hydrogenase large subunit, C-terminal domain Tmari_0199 PF00037 4Fe-4S binding domain Tmari_0199 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tmari_0202 PF00005 ABC transporter Tmari_0203 PF17191 RecG wedge domain Tmari_0203 PF00271 Helicase conserved C-terminal domain Tmari_0203 PF00270 DEAD/DEAH box helicase Tmari_0206 PF02887 Pyruvate kinase, alpha/beta domain Tmari_0206 PF00224 Pyruvate kinase, barrel domain Tmari_0207 PF00365 Phosphofructokinase Tmari_0209 PF08669 Glycine cleavage T-protein C-terminal barrel domain Tmari_0209 PF01571 Aminomethyltransferase folate-binding domain Tmari_0210 PF01597 Glycine cleavage H-protein Tmari_0211 PF02347 Glycine cleavage system P-protein Tmari_0212 PF02347 Glycine cleavage system P-protein Tmari_0213 PF01042 Endoribonuclease L-PSP Tmari_0214 PF02091 Glycyl-tRNA synthetase alpha subunit Tmari_0215 PF02092 Glycyl-tRNA synthetase beta subunit Tmari_0215 PF05746 DALR anticodon binding domain Tmari_0216 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmari_0216 PF18269 T3SS EscN ATPase C-terminal domain Tmari_0216 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmari_0217 PF02108 Flagellar assembly protein FliH Tmari_0218 PF01706 FliG C-terminal domain Tmari_0218 PF14842 FliG N-terminal domain Tmari_0218 PF14841 FliG middle domain Tmari_0219 PF01514 Secretory protein of YscJ/FliF family Tmari_0219 PF08345 Flagellar M-ring protein C-terminal Tmari_0220 PF00005 ABC transporter Tmari_0222 PF02237 Biotin protein ligase C terminal domain Tmari_0222 PF03099 Biotin/lipoate A/B protein ligase family Tmari_0222 PF08279 HTH domain Tmari_0223 PF00291 Pyridoxal-phosphate dependent enzyme Tmari_0226 PF00037 4Fe-4S binding domain Tmari_0226 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmari_0226 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmari_0229 PF08245 Mur ligase middle domain Tmari_0229 PF01225 Mur ligase family, catalytic domain Tmari_0229 PF02875 Mur ligase family, glutamate ligase domain Tmari_0230 PF04101 Glycosyltransferase family 28 C-terminal domain Tmari_0230 PF03033 Glycosyltransferase family 28 N-terminal domain Tmari_0231 PF01098 Cell cycle protein Tmari_0232 PF08245 Mur ligase middle domain Tmari_0233 PF00953 Glycosyl transferase family 4 Tmari_0233 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Tmari_0234 PF02875 Mur ligase family, glutamate ligase domain Tmari_0234 PF08245 Mur ligase middle domain Tmari_0234 PF01225 Mur ligase family, catalytic domain Tmari_0235 PF02875 Mur ligase family, glutamate ligase domain Tmari_0235 PF08245 Mur ligase middle domain Tmari_0235 PF01225 Mur ligase family, catalytic domain Tmari_0237 PF00483 Nucleotidyl transferase Tmari_0237 PF00132 Bacterial transferase hexapeptide (six repeats) Tmari_0238 PF00132 Bacterial transferase hexapeptide (six repeats) Tmari_0238 PF00483 Nucleotidyl transferase Tmari_0241 PF06968 Biotin and Thiamin Synthesis associated domain Tmari_0241 PF04055 Radical SAM superfamily Tmari_0242 PF13237 4Fe-4S dicluster domain Tmari_0242 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmari_0242 PF10531 SLBB domain Tmari_0242 PF13375 RnfC Barrel sandwich hybrid domain Tmari_0243 PF03116 NQR2, RnfD, RnfE family Tmari_0245 PF02508 Rnf-Nqr subunit, membrane protein Tmari_0246 PF02508 Rnf-Nqr subunit, membrane protein Tmari_0247 PF04060 Putative Fe-S cluster Tmari_0247 PF13187 4Fe-4S dicluster domain Tmari_0248 PF02481 DNA recombination-mediator protein A Tmari_0248 PF18255 DNA processing protein A sterile alpha motif domain Tmari_0249 PF02599 Global regulator protein family Tmari_0250 PF02686 Glu-tRNAGln amidotransferase C subunit Tmari_0251 PF02021 Uncharacterised protein family UPF0102 Tmari_0252 PF01668 SmpB protein Tmari_0253 PF00830 Ribosomal L28 family Tmari_0255 PF01336 OB-fold nucleic acid binding domain Tmari_0255 PF01966 HD domain Tmari_0256 PF01751 Toprim domain Tmari_0256 PF01131 DNA topoisomerase Tmari_0257 PF07478 D-ala D-ala ligase C-terminus Tmari_0257 PF01820 D-ala D-ala ligase N-terminus Tmari_0259 PF01384 Phosphate transporter family Tmari_0260 PF00712 DNA polymerase III beta subunit, N-terminal domain Tmari_0260 PF02767 DNA polymerase III beta subunit, central domain Tmari_0260 PF02768 DNA polymerase III beta subunit, C-terminal domain Tmari_0261 PF01134 Glucose inhibited division protein A Tmari_0261 PF13932 GidA associated domain Tmari_0262 PF01479 S4 domain Tmari_0262 PF00849 RNA pseudouridylate synthase Tmari_0263 PF01541 GIY-YIG catalytic domain Tmari_0263 PF08459 UvrC Helix-hairpin-helix N-terminal Tmari_0263 PF02151 UvrB/uvrC motif Tmari_0264 PF00216 Bacterial DNA-binding protein Tmari_0265 PF01926 50S ribosome-binding GTPase Tmari_0265 PF10396 GTP-binding protein TrmE N-terminus Tmari_0265 PF12631 MnmE helical domain Tmari_0266 PF02310 B12 binding domain Tmari_0266 PF02574 Homocysteine S-methyltransferase Tmari_0266 PF00809 Pterin binding enzyme Tmari_0266 PF02965 Vitamin B12 dependent methionine synthase, activation domain Tmari_0266 PF02607 B12 binding domain Tmari_0268 PF02219 Methylenetetrahydrofolate reductase Tmari_0268 PF02574 Homocysteine S-methyltransferase Tmari_0270 PF00391 PEP-utilising enzyme, mobile domain Tmari_0270 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Tmari_0270 PF02896 PEP-utilising enzyme, TIM barrel domain Tmari_0271 PF01116 Fructose-bisphosphate aldolase class-II Tmari_0272 PF00871 Acetokinase family Tmari_0273 PF00392 Bacterial regulatory proteins, gntR family Tmari_0274 PF11762 L-arabinose isomerase C-terminal domain Tmari_0274 PF02610 L-arabinose isomerase Tmari_0276 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0277 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0279 PF06964 Alpha-L-arabinofuranosidase C-terminal domain Tmari_0280 PF01263 Aldose 1-epimerase Tmari_0281 PF00596 Class II Aldolase and Adducin N-terminal domain Tmari_0282 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmari_0282 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmari_0283 PF13685 Iron-containing alcohol dehydrogenase Tmari_0285 PF00005 ABC transporter Tmari_0285 PF00664 ABC transporter transmembrane region Tmari_0286 PF00664 ABC transporter transmembrane region Tmari_0286 PF00005 ABC transporter Tmari_0287 PF00365 Phosphofructokinase Tmari_0288 PF00285 Citrate synthase, C-terminal domain Tmari_0289 PF00330 Aconitase family (aconitate hydratase) Tmari_0290 PF00694 Aconitase C-terminal domain Tmari_0291 PF00171 Aldehyde dehydrogenase family Tmari_0292 PF01472 PUA domain Tmari_0292 PF00696 Amino acid kinase family Tmari_0293 PF00923 Transaldolase/Fructose-6-phosphate aldolase Tmari_0294 PF00294 pfkB family carbohydrate kinase Tmari_0296 PF16912 Glucose dehydrogenase C-terminus Tmari_0296 PF08240 Alcohol dehydrogenase GroES-like domain Tmari_0297 PF00356 Bacterial regulatory proteins, lacI family Tmari_0299 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0300 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_0300 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0301 PF00005 ABC transporter Tmari_0301 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0302 PF00005 ABC transporter Tmari_0302 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0303 PF00942 Cellulose binding domain Tmari_0303 PF03442 Carbohydrate binding domain X2 Tmari_0306 PF01055 Glycosyl hydrolases family 31 Tmari_0306 PF13802 Galactose mutarotase-like Tmari_0307 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_0308 PF02449 Beta-galactosidase Tmari_0308 PF08533 Beta-galactosidase C-terminal domain Tmari_0308 PF08532 Beta-galactosidase trimerisation domain Tmari_0310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tmari_0310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tmari_0311 PF00248 Aldo/keto reductase family Tmari_0315 PF00403 Heavy-metal-associated domain Tmari_0316 PF01209 ubiE/COQ5 methyltransferase family Tmari_0320 PF03480 Bacterial extracellular solute-binding protein, family 7 Tmari_0322 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Tmari_0324 PF01418 Helix-turn-helix domain, rpiR family Tmari_0324 PF01380 SIS domain Tmari_0325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmari_0325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmari_0326 PF01555 DNA methylase Tmari_0328 PF07969 Amidohydrolase family Tmari_0329 PF00156 Phosphoribosyl transferase domain Tmari_0330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Tmari_0331 PF01180 Dihydroorotate dehydrogenase Tmari_0332 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tmari_0334 PF13026 Protein of unknown function (DUF3887) Tmari_0334 PF12146 Serine aminopeptidase, S33 Tmari_0335 PF04055 Radical SAM superfamily Tmari_0335 PF08497 Radical SAM N-terminal Tmari_0341 PF00793 DAHP synthetase I family Tmari_0341 PF18152 DAHP synthase ferredoxin-like domain Tmari_0343 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Tmari_0344 PF08501 Shikimate dehydrogenase substrate binding domain Tmari_0344 PF01488 Shikimate / quinate 5-dehydrogenase Tmari_0345 PF01264 Chorismate synthase Tmari_0346 PF01202 Shikimate kinase Tmari_0346 PF01761 3-dehydroquinate synthase Tmari_0347 PF01220 Dehydroquinase class II Tmari_0349 PF00005 ABC transporter Tmari_0349 PF12704 MacB-like periplasmic core domain Tmari_0349 PF02687 FtsX-like permease family Tmari_0350 PF00005 ABC transporter Tmari_0351 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Tmari_0354 PF13291 ACT domain Tmari_0354 PF00291 Pyridoxal-phosphate dependent enzyme Tmari_0356 PF00781 Diacylglycerol kinase catalytic domain Tmari_0358 PF03819 MazG nucleotide pyrophosphohydrolase domain Tmari_0360 PF01261 Xylose isomerase-like TIM barrel Tmari_0361 PF05670 NFACT protein RNA binding domain Tmari_0362 PF00128 Alpha amylase, catalytic domain Tmari_0362 PF09178 Domain of unknown function (DUF1945) Tmari_0363 PF02127 Aminopeptidase I zinc metalloprotease (M18) Tmari_0364 PF00730 HhH-GPD superfamily base excision DNA repair protein Tmari_0364 PF00633 Helix-hairpin-helix motif Tmari_0364 PF10576 Iron-sulfur binding domain of endonuclease III Tmari_0368 PF06745 KaiC Tmari_0369 PF01316 Arginine repressor, DNA binding domain Tmari_0369 PF02863 Arginine repressor, C-terminal domain Tmari_0370 PF00873 AcrB/AcrD/AcrF family Tmari_0371 PF00012 Hsp70 protein Tmari_0372 PF00011 Hsp20/alpha crystallin family Tmari_0373 PF06130 Phosphate propanoyltransferase Tmari_0374 PF01925 Sulfite exporter TauE/SafE Tmari_0376 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Tmari_0376 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Tmari_0377 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0377 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmari_0379 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Tmari_0379 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0380 PF00633 Helix-hairpin-helix motif Tmari_0380 PF14815 NUDIX domain Tmari_0380 PF00730 HhH-GPD superfamily base excision DNA repair protein Tmari_0381 PF00881 Nitroreductase family Tmari_0383 PF03477 ATP cone domain Tmari_0383 PF13597 Anaerobic ribonucleoside-triphosphate reductase Tmari_0384 PF00881 Nitroreductase family Tmari_0387 PF00005 ABC transporter Tmari_0389 PF00534 Glycosyl transferases group 1 Tmari_0393 PF13247 4Fe-4S dicluster domain Tmari_0393 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tmari_0393 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0394 PF13187 4Fe-4S dicluster domain Tmari_0394 PF01645 Conserved region in glutamate synthase Tmari_0395 PF00310 Glutamine amidotransferases class-II Tmari_0396 PF00486 Transcriptional regulatory protein, C terminal Tmari_0396 PF00072 Response regulator receiver domain Tmari_0397 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_0397 PF00672 HAMP domain Tmari_0397 PF00512 His Kinase A (phospho-acceptor) domain Tmari_0398 PF00265 Thymidine kinase Tmari_0399 PF00909 Ammonium Transporter Family Tmari_0400 PF00543 Nitrogen regulatory protein P-II Tmari_0402 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmari_0405 PF01339 CheB methylesterase Tmari_0405 PF00072 Response regulator receiver domain Tmari_0406 PF04225 Opacity-associated protein A LysM-like domain Tmari_0406 PF01551 Peptidase family M23 Tmari_0408 PF01047 MarR family Tmari_0408 PF00480 ROK family Tmari_0409 PF00107 Zinc-binding dehydrogenase Tmari_0409 PF08240 Alcohol dehydrogenase GroES-like domain Tmari_0410 PF02633 Creatinine amidohydrolase Tmari_0411 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tmari_0411 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tmari_0413 PF01261 Xylose isomerase-like TIM barrel Tmari_0414 PF03239 Iron permease FTR1 family Tmari_0416 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0417 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0418 PF17912 MalK OB fold domain Tmari_0418 PF00005 ABC transporter Tmari_0418 PF03459 TOBE domain Tmari_0420 PF00465 Iron-containing alcohol dehydrogenase Tmari_0425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Tmari_0426 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_0427 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0428 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0430 PF00544 Pectate lyase Tmari_0431 PF02056 Family 4 glycosyl hydrolase Tmari_0431 PF11975 Family 4 glycosyl hydrolase C-terminal domain Tmari_0432 PF05448 Acetyl xylan esterase (AXE1) Tmari_0433 PF08240 Alcohol dehydrogenase GroES-like domain Tmari_0433 PF00107 Zinc-binding dehydrogenase Tmari_0434 PF00295 Glycosyl hydrolases family 28 Tmari_0435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Tmari_0435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Tmari_0436 PF00392 Bacterial regulatory proteins, gntR family Tmari_0436 PF07729 FCD domain Tmari_0440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmari_0440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmari_0441 PF10415 Fumarase C C-terminus Tmari_0441 PF00206 Lyase Tmari_0442 PF01926 50S ribosome-binding GTPase Tmari_0442 PF12631 MnmE helical domain Tmari_0442 PF10396 GTP-binding protein TrmE N-terminus Tmari_0443 PF00731 AIR carboxylase Tmari_0444 PF02222 ATP-grasp domain Tmari_0444 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Tmari_0445 PF01103 Surface antigen Tmari_0445 PF07244 Surface antigen variable number repeat Tmari_0446 PF02511 Thymidylate synthase complementing protein Tmari_0448 PF00471 Ribosomal protein L33 Tmari_0449 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Tmari_0450 PF02357 Transcription termination factor nusG Tmari_0450 PF00467 KOW motif Tmari_0450 PF18298 NusG additional domain Tmari_0451 PF00298 Ribosomal protein L11, RNA binding domain Tmari_0451 PF03946 Ribosomal protein L11, N-terminal domain Tmari_0452 PF00687 Ribosomal protein L1p/L10e family Tmari_0453 PF00466 Ribosomal protein L10 Tmari_0454 PF16320 Ribosomal protein L7/L12 dimerisation domain Tmari_0454 PF00542 Ribosomal protein L7/L12 C-terminal domain Tmari_0455 PF04560 RNA polymerase Rpb2, domain 7 Tmari_0455 PF04563 RNA polymerase beta subunit Tmari_0455 PF10385 RNA polymerase beta subunit external 1 domain Tmari_0455 PF00562 RNA polymerase Rpb2, domain 6 Tmari_0455 PF04565 RNA polymerase Rpb2, domain 3 Tmari_0456 PF04997 RNA polymerase Rpb1, domain 1 Tmari_0456 PF04998 RNA polymerase Rpb1, domain 5 Tmari_0456 PF04983 RNA polymerase Rpb1, domain 3 Tmari_0456 PF00623 RNA polymerase Rpb1, domain 2 Tmari_0456 PF05000 RNA polymerase Rpb1, domain 4 Tmari_0457 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_0458 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmari_0458 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmari_0458 PF14579 Helix-hairpin-helix motif Tmari_0459 PF00849 RNA pseudouridylate synthase Tmari_0459 PF01479 S4 domain Tmari_0460 PF01252 Signal peptidase (SPase) II Tmari_0461 PF01739 CheR methyltransferase, SAM binding domain Tmari_0461 PF03705 CheR methyltransferase, all-alpha domain Tmari_0463 PF01709 Transcriptional regulator Tmari_0465 PF00486 Transcriptional regulatory protein, C terminal Tmari_0465 PF00072 Response regulator receiver domain Tmari_0469 PF01174 SNO glutamine amidotransferase family Tmari_0470 PF01680 SOR/SNZ family Tmari_0472 PF00857 Isochorismatase family Tmari_0474 PF00395 S-layer homology domain Tmari_0475 PF00579 tRNA synthetases class I (W and Y) Tmari_0475 PF01479 S4 domain Tmari_0477 PF17755 UvrA DNA-binding domain Tmari_0477 PF00005 ABC transporter Tmari_0477 PF17760 UvrA interaction domain Tmari_0480 PF00005 ABC transporter Tmari_0482 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0483 PF01910 Thiamine-binding protein Tmari_0484 PF01883 Iron-sulfur cluster assembly protein Tmari_0485 PF17827 PrmC N-terminal domain Tmari_0485 PF05175 Methyltransferase small domain Tmari_0487 PF02146 Sir2 family Tmari_0489 PF00579 tRNA synthetases class I (W and Y) Tmari_0490 PF02616 Segregation and condensation protein ScpA Tmari_0491 PF04079 Segregation and condensation complex subunit ScpB Tmari_0492 PF02562 PhoH-like protein Tmari_0492 PF13638 PIN domain Tmari_0493 PF00929 Exonuclease Tmari_0493 PF01336 OB-fold nucleic acid binding domain Tmari_0493 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmari_0493 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmari_0493 PF11490 DNA polymerase III polC-type N-terminus II Tmari_0493 PF14579 Helix-hairpin-helix motif Tmari_0493 PF02811 PHP domain Tmari_0495 PF00005 ABC transporter Tmari_0495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0497 PF00005 ABC transporter Tmari_0497 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0498 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0498 PF00005 ABC transporter Tmari_0499 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0499 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_0500 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0501 PF00166 Chaperonin 10 Kd subunit Tmari_0502 PF00118 TCP-1/cpn60 chaperonin family Tmari_0504 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tmari_0504 PF12002 MgsA AAA+ ATPase C terminal Tmari_0504 PF01661 Macro domain Tmari_0504 PF16193 AAA C-terminal domain Tmari_0505 PF16363 GDP-mannose 4,6 dehydratase Tmari_0507 PF03167 Uracil DNA glycosylase superfamily Tmari_0509 PF01078 Magnesium chelatase, subunit ChlI Tmari_0509 PF13335 Magnesium chelatase, subunit ChlI C-terminal Tmari_0510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmari_0510 PF04073 Aminoacyl-tRNA editing domain Tmari_0510 PF03129 Anticodon binding domain Tmari_0511 PF16199 Radical_SAM C-terminal domain Tmari_0511 PF04055 Radical SAM superfamily Tmari_0517 PF00227 Proteasome subunit Tmari_0518 PF07724 AAA domain (Cdc48 subfamily) Tmari_0518 PF00004 ATPase family associated with various cellular activities (AAA) Tmari_0518 PF10431 C-terminal, D2-small domain, of ClpB protein Tmari_0523 PF17209 Hfq protein Tmari_0524 PF01926 50S ribosome-binding GTPase Tmari_0524 PF13167 GTP-binding GTPase N-terminal Tmari_0524 PF16360 GTP-binding GTPase Middle Region Tmari_0525 PF02911 Formyl transferase, C-terminal domain Tmari_0525 PF00551 Formyl transferase Tmari_0526 PF00403 Heavy-metal-associated domain Tmari_0527 PF00005 ABC transporter Tmari_0527 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_0528 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_0529 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0530 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0530 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_0531 PF00140 Sigma-70 factor, region 1.2 Tmari_0531 PF04545 Sigma-70, region 4 Tmari_0531 PF04539 Sigma-70 region 3 Tmari_0531 PF04542 Sigma-70 region 2 Tmari_0531 PF03979 Sigma-70 factor, region 1.1 Tmari_0534 PF13514 AAA domain Tmari_0535 PF01545 Cation efflux family Tmari_0536 PF00291 Pyridoxal-phosphate dependent enzyme Tmari_0538 PF05683 Fumarase C-terminus Tmari_0538 PF05681 Fumarate hydratase (Fumerase) Tmari_0539 PF03949 Malic enzyme, NAD binding domain Tmari_0539 PF00390 Malic enzyme, N-terminal domain Tmari_0541 PF00005 ABC transporter Tmari_0542 PF00288 GHMP kinases N terminal domain Tmari_0543 PF00291 Pyridoxal-phosphate dependent enzyme Tmari_0544 PF13840 ACT domain Tmari_0544 PF01842 ACT domain Tmari_0544 PF00696 Amino acid kinase family Tmari_0545 PF00205 Thiamine pyrophosphate enzyme, central domain Tmari_0545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmari_0545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Tmari_0546 PF10369 Small subunit of acetolactate synthase Tmari_0547 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Tmari_0547 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Tmari_0548 PF00920 Dehydratase family Tmari_0549 PF08502 LeuA allosteric (dimerisation) domain Tmari_0549 PF00682 HMGL-like Tmari_0550 PF08502 LeuA allosteric (dimerisation) domain Tmari_0550 PF00682 HMGL-like Tmari_0551 PF00330 Aconitase family (aconitate hydratase) Tmari_0552 PF00694 Aconitase C-terminal domain Tmari_0553 PF00180 Isocitrate/isopropylmalate dehydrogenase Tmari_0554 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Tmari_0554 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Tmari_0554 PF02142 MGS-like domain Tmari_0555 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Tmari_0555 PF00117 Glutamine amidotransferase class-I Tmari_0558 PF01544 CorA-like Mg2+ transporter protein Tmari_0563 PF03749 Sugar fermentation stimulation protein RE domain Tmari_0563 PF17746 SfsA N-terminal OB domain Tmari_0565 PF02082 Transcriptional regulator Tmari_0568 PF00448 SRP54-type protein, GTPase domain Tmari_0568 PF02881 SRP54-type protein, helical bundle domain Tmari_0569 PF17820 PDZ domain Tmari_0569 PF13180 PDZ domain Tmari_0570 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tmari_0571 PF00795 Carbon-nitrogen hydrolase Tmari_0572 PF02547 Queuosine biosynthesis protein Tmari_0573 PF02075 Crossover junction endodeoxyribonuclease RuvC Tmari_0574 PF07733 Bacterial DNA polymerase III alpha NTPase domain Tmari_0574 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Tmari_0574 PF14579 Helix-hairpin-helix motif Tmari_0574 PF02811 PHP domain Tmari_0574 PF00929 Exonuclease Tmari_0575 PF00583 Acetyltransferase (GNAT) family Tmari_0576 PF03807 NADP oxidoreductase coenzyme F420-dependent Tmari_0576 PF14748 Pyrroline-5-carboxylate reductase dimerisation Tmari_0577 PF11734 TilS substrate C-terminal domain Tmari_0577 PF01171 PP-loop family Tmari_0578 PF06480 FtsH Extracellular Tmari_0578 PF17862 AAA+ lid domain Tmari_0578 PF01434 Peptidase family M41 Tmari_0578 PF00004 ATPase family associated with various cellular activities (AAA) Tmari_0581 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Tmari_0581 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Tmari_0581 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Tmari_0583 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Tmari_0583 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Tmari_0584 PF00892 EamA-like transporter family Tmari_0585 PF00571 CBS domain Tmari_0585 PF01368 DHH family Tmari_0585 PF02833 DHHA2 domain Tmari_0585 PF07085 DRTGG domain Tmari_0589 PF00905 Penicillin binding protein transpeptidase domain Tmari_0589 PF03717 Penicillin-binding Protein dimerisation domain Tmari_0590 PF00005 ABC transporter Tmari_0593 PF00860 Permease family Tmari_0595 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0597 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0603 PF01250 Ribosomal protein S6 Tmari_0604 PF00436 Single-strand binding protein family Tmari_0605 PF01084 Ribosomal protein S18 Tmari_0607 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tmari_0607 PF00753 Metallo-beta-lactamase superfamily Tmari_0610 PF02350 UDP-N-acetylglucosamine 2-epimerase Tmari_0618 PF13087 AAA domain Tmari_0618 PF13086 AAA domain Tmari_0618 PF13195 Protein of unknown function (DUF4011) Tmari_0618 PF13087 AAA domain Tmari_0618 PF13086 AAA domain Tmari_0618 PF13195 Protein of unknown function (DUF4011) Tmari_0619 PF13439 Glycosyltransferase Family 4 Tmari_0619 PF00534 Glycosyl transferases group 1 Tmari_0621 PF00535 Glycosyl transferase family 2 Tmari_0621 PF01501 Glycosyl transferase family 8 Tmari_0623 PF13439 Glycosyltransferase Family 4 Tmari_0623 PF00534 Glycosyl transferases group 1 Tmari_0625 PF13439 Glycosyltransferase Family 4 Tmari_0625 PF00534 Glycosyl transferases group 1 Tmari_0628 PF13439 Glycosyltransferase Family 4 Tmari_0628 PF00534 Glycosyl transferases group 1 Tmari_0631 PF16363 GDP-mannose 4,6 dehydratase Tmari_0632 PF00534 Glycosyl transferases group 1 Tmari_0632 PF13477 Glycosyl transferase 4-like Tmari_0633 PF02397 Bacterial sugar transferase Tmari_0634 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Tmari_0634 PF10135 Rod binding protein Tmari_0639 PF10531 SLBB domain Tmari_0639 PF02563 Polysaccharide biosynthesis/export protein Tmari_0639 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Tmari_0641 PF13419 Haloacid dehalogenase-like hydrolase Tmari_0643 PF03415 Clostripain family Tmari_0645 PF02540 NAD synthase Tmari_0647 PF02542 YgbB family Tmari_0653 PF01938 TRAM domain Tmari_0653 PF00919 Uncharacterized protein family UPF0004 Tmari_0653 PF04055 Radical SAM superfamily Tmari_0654 PF17284 Spermidine synthase tetramerisation domain Tmari_0655 PF02675 S-adenosylmethionine decarboxylase Tmari_0656 PF01381 Helix-turn-helix Tmari_0657 PF02915 Rubrerythrin Tmari_0658 PF01880 Desulfoferrodoxin Tmari_0659 PF00301 Rubredoxin Tmari_0660 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase Tmari_0662 PF00550 Phosphopantetheine attachment site Tmari_0665 PF00291 Pyridoxal-phosphate dependent enzyme Tmari_0666 PF00132 Bacterial transferase hexapeptide (six repeats) Tmari_0667 PF01026 TatD related DNase Tmari_0668 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Tmari_0674 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmari_0674 PF00460 Flagella basal body rod protein Tmari_0674 PF07559 Flagellar basal body protein FlaE Tmari_0675 PF06289 Flagellar and Swarming motility proteins Tmari_0676 PF01618 MotA/TolQ/ExbB proton channel family Tmari_0677 PF13677 Membrane MotB of proton-channel complex MotA/MotB Tmari_0677 PF00691 OmpA family Tmari_0679 PF02154 Flagellar motor switch protein FliM Tmari_0679 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tmari_0680 PF04509 CheC-like family Tmari_0680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Tmari_0686 PF12169 DNA polymerase III subunits gamma and tau domain III Tmari_0687 PF02575 YbaB/EbfC DNA-binding family Tmari_0688 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Tmari_0688 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Tmari_0689 PF00162 Phosphoglycerate kinase Tmari_0689 PF00121 Triosephosphate isomerase Tmari_0692 PF01648 4'-phosphopantetheinyl transferase superfamily Tmari_0694 PF05697 Bacterial trigger factor protein (TF) Tmari_0694 PF05698 Bacterial trigger factor protein (TF) C-terminus Tmari_0695 PF00574 Clp protease Tmari_0698 PF00813 FliP family Tmari_0700 PF00072 Response regulator receiver domain Tmari_0701 PF01584 CheW-like domain Tmari_0702 PF07194 P2 response regulator binding domain Tmari_0702 PF01627 Hpt domain Tmari_0702 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_0702 PF02895 Signal transducing histidine kinase, homodimeric domain Tmari_0702 PF01584 CheW-like domain Tmari_0703 PF00994 Probable molybdopterin binding domain Tmari_0703 PF18146 Damage-inducible protein CinA KH domain Tmari_0703 PF02464 Competence-damaged protein Tmari_0705 PF00005 ABC transporter Tmari_0707 PF02527 rRNA small subunit methyltransferase G Tmari_0708 PF03099 Biotin/lipoate A/B protein ligase family Tmari_0709 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Tmari_0715 PF12627 Probable RNA and SrmB- binding site of polymerase A Tmari_0715 PF01743 Poly A polymerase head domain Tmari_0715 PF02272 DHHA1 domain Tmari_0715 PF01368 DHH family Tmari_0715 PF00571 CBS domain Tmari_0716 PF01039 Carboxyl transferase domain Tmari_0718 PF00364 Biotin-requiring enzyme Tmari_0719 PF01584 CheW-like domain Tmari_0720 PF09190 DALR domain Tmari_0720 PF01406 tRNA synthetases class I (C) catalytic domain Tmari_0721 PF00464 Serine hydroxymethyltransferase Tmari_0723 PF17876 Cold shock domain Tmari_0723 PF00575 S1 RNA binding domain Tmari_0723 PF00773 RNB domain Tmari_0723 PF08206 Ribonuclease B OB domain Tmari_0725 PF01699 Sodium/calcium exchanger protein Tmari_0727 PF01523 Putative modulator of DNA gyrase Tmari_0728 PF01523 Putative modulator of DNA gyrase Tmari_0730 PF02824 TGS domain Tmari_0730 PF04607 Region found in RelA / SpoT proteins Tmari_0730 PF13291 ACT domain Tmari_0731 PF02580 D-Tyr-tRNA(Tyr) deacylase Tmari_0732 PF02677 Epoxyqueuosine reductase QueH Tmari_0735 PF01134 Glucose inhibited division protein A Tmari_0737 PF01238 Phosphomannose isomerase type I Tmari_0740 PF01966 HD domain Tmari_0741 PF02824 TGS domain Tmari_0741 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmari_0741 PF03129 Anticodon binding domain Tmari_0741 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmari_0742 PF01467 Cytidylyltransferase-like Tmari_0743 PF00149 Calcineurin-like phosphoesterase Tmari_0745 PF13439 Glycosyltransferase Family 4 Tmari_0745 PF00534 Glycosyl transferases group 1 Tmari_0748 PF03572 Peptidase family S41 Tmari_0748 PF13180 PDZ domain Tmari_0752 PF00485 Phosphoribulokinase / Uridine kinase family Tmari_0753 PF02056 Family 4 glycosyl hydrolase Tmari_0753 PF11975 Family 4 glycosyl hydrolase C-terminal domain Tmari_0754 PF01209 ubiE/COQ5 methyltransferase family Tmari_0755 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Tmari_0755 PF18267 Rubredoxin NAD+ reductase C-terminal domain Tmari_0755 PF04324 BFD-like [2Fe-2S] binding domain Tmari_0756 PF00753 Metallo-beta-lactamase superfamily Tmari_0756 PF00258 Flavodoxin Tmari_0757 PF00535 Glycosyl transferase family 2 Tmari_0758 PF13181 Tetratricopeptide repeat Tmari_0758 PF00535 Glycosyl transferase family 2 Tmari_0759 PF00669 Bacterial flagellin N-terminal helical region Tmari_0759 PF00700 Bacterial flagellin C-terminal helical region Tmari_0763 PF00318 Ribosomal protein S2 Tmari_0764 PF01906 Putative heavy-metal-binding Tmari_0766 PF00005 ABC transporter Tmari_0767 PF00392 Bacterial regulatory proteins, gntR family Tmari_0767 PF07702 UTRA domain Tmari_0768 PF00128 Alpha amylase, catalytic domain Tmari_0768 PF02806 Alpha amylase, C-terminal all-beta domain Tmari_0768 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tmari_0769 PF01926 50S ribosome-binding GTPase Tmari_0770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Tmari_0770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Tmari_0770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Tmari_0770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Tmari_0771 PF04055 Radical SAM superfamily Tmari_0771 PF18693 TRAM domain Tmari_0771 PF00919 Uncharacterized protein family UPF0004 Tmari_0772 PF09115 DNA polymerase III, delta subunit, C terminal Tmari_0773 PF04468 PSP1 C-terminal conserved region Tmari_0774 PF11146 Protein of unknown function (DUF2905) Tmari_0776 PF04760 Translation initiation factor IF-2, N-terminal region Tmari_0776 PF00009 Elongation factor Tu GTP binding domain Tmari_0776 PF11987 Translation-initiation factor 2 Tmari_0781 PF00578 AhpC/TSA family Tmari_0786 PF04454 Encapsulating protein for peroxidase Tmari_0789 PF01964 Radical SAM ThiC family Tmari_0791 PF08543 Phosphomethylpyrimidine kinase Tmari_0791 PF10120 Thiamine-phosphate synthase Tmari_0792 PF14489 QueF-like protein Tmari_0793 PF02592 Putative vitamin uptake transporter Tmari_0794 PF00005 ABC transporter Tmari_0798 PF04029 2-phosphosulpholactate phosphatase Tmari_0799 PF00698 Acyl transferase domain Tmari_0800 PF02632 BioY family Tmari_0801 PF03060 Nitronate monooxygenase Tmari_0802 PF07977 FabA-like domain Tmari_0803 PF00109 Beta-ketoacyl synthase, N-terminal domain Tmari_0803 PF02801 Beta-ketoacyl synthase, C-terminal domain Tmari_0804 PF00117 Glutamine amidotransferase class-I Tmari_0804 PF06418 CTP synthase N-terminus Tmari_0805 PF02811 PHP domain Tmari_0806 PF00953 Glycosyl transferase family 4 Tmari_0808 PF10417 C-terminal domain of 1-Cys peroxiredoxin Tmari_0808 PF00578 AhpC/TSA family Tmari_0809 PF00480 ROK family Tmari_0810 PF00933 Glycosyl hydrolase family 3 N terminal domain Tmari_0811 PF01547 Bacterial extracellular solute-binding protein Tmari_0812 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0813 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_0814 PF01380 SIS domain Tmari_0815 PF01979 Amidohydrolase family Tmari_0816 PF01554 MatE Tmari_0819 PF03808 Glycosyl transferase WecB/TagA/CpsF family Tmari_0820 PF00860 Permease family Tmari_0821 PF00465 Iron-containing alcohol dehydrogenase Tmari_0822 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Tmari_0822 PF01409 tRNA synthetases class II core domain (F) Tmari_0823 PF03484 tRNA synthetase B5 domain Tmari_0823 PF03147 Ferredoxin-fold anticodon binding domain Tmari_0823 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Tmari_0823 PF01588 Putative tRNA binding domain Tmari_0823 PF03483 B3/4 domain Tmari_0824 PF18665 Tetracyclin repressor-like, C-terminal domain Tmari_0824 PF00440 Bacterial regulatory proteins, tetR family Tmari_0827 PF04055 Radical SAM superfamily Tmari_0827 PF06463 Molybdenum Cofactor Synthesis C Tmari_0829 PF00005 ABC transporter Tmari_0829 PF08402 TOBE domain Tmari_0830 PF00294 pfkB family carbohydrate kinase Tmari_0832 PF04055 Radical SAM superfamily Tmari_0832 PF00919 Uncharacterized protein family UPF0004 Tmari_0833 PF01063 Amino-transferase class IV Tmari_0835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_0835 PF00986 DNA gyrase B subunit, carboxyl terminus Tmari_0835 PF01751 Toprim domain Tmari_0835 PF00204 DNA gyrase B Tmari_0837 PF11983 Membrane-attachment and polymerisation-promoting switch Tmari_0837 PF02491 SHS2 domain inserted in FTSA Tmari_0838 PF00091 Tubulin/FtsZ family, GTPase domain Tmari_0838 PF12327 FtsZ family, C-terminal domain Tmari_0839 PF00437 Type II/IV secretion system protein Tmari_0841 PF01098 Cell cycle protein Tmari_0844 PF00072 Response regulator receiver domain Tmari_0845 PF02971 Formiminotransferase domain Tmari_0845 PF07837 Formiminotransferase domain, N-terminal subdomain Tmari_0846 PF02590 Predicted SPOUT methyltransferase Tmari_0847 PF03471 Transporter associated domain Tmari_0847 PF00571 CBS domain Tmari_0848 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tmari_0849 PF01926 50S ribosome-binding GTPase Tmari_0849 PF07650 KH domain Tmari_0850 PF01926 50S ribosome-binding GTPase Tmari_0851 PF00684 DnaJ central domain Tmari_0851 PF00226 DnaJ domain Tmari_0851 PF01556 DnaJ C terminal domain Tmari_0852 PF01025 GrpE Tmari_0853 PF01628 HrcA protein C terminal domain Tmari_0854 PF03481 Putative GTP-binding controlling metal-binding Tmari_0854 PF01300 Telomere recombination Tmari_0855 PF00512 His Kinase A (phospho-acceptor) domain Tmari_0855 PF00672 HAMP domain Tmari_0855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_0855 PF14827 Double sensory domain of two-component sensor kinase Tmari_0855 PF13426 PAS domain Tmari_0856 PF08668 HDOD domain Tmari_0857 PF02033 Ribosome-binding factor A Tmari_0858 PF16198 tRNA pseudouridylate synthase B C-terminal domain Tmari_0858 PF01472 PUA domain Tmari_0858 PF01509 TruB family pseudouridylate synthase (N terminal domain) Tmari_0859 PF06574 FAD synthetase Tmari_0859 PF01687 Riboflavin kinase Tmari_0861 PF02699 Preprotein translocase subunit Tmari_0862 PF02355 Protein export membrane protein Tmari_0862 PF07549 SecD/SecF GG Motif Tmari_0863 PF07549 SecD/SecF GG Motif Tmari_0863 PF02355 Protein export membrane protein Tmari_0864 PF00483 Nucleotidyl transferase Tmari_0865 PF03948 Ribosomal protein L9, C-terminal domain Tmari_0865 PF01281 Ribosomal protein L9, N-terminal domain Tmari_0866 PF00753 Metallo-beta-lactamase superfamily Tmari_0866 PF12706 Beta-lactamase superfamily domain Tmari_0868 PF01145 SPFH domain / Band 7 family Tmari_0870 PF13192 Thioredoxin domain Tmari_0870 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0871 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_0872 PF03717 Penicillin-binding Protein dimerisation domain Tmari_0872 PF03793 PASTA domain Tmari_0872 PF00905 Penicillin binding protein transpeptidase domain Tmari_0874 PF01795 MraW methylase family Tmari_0875 PF17871 AAA lid domain Tmari_0875 PF00004 ATPase family associated with various cellular activities (AAA) Tmari_0875 PF10431 C-terminal, D2-small domain, of ClpB protein Tmari_0875 PF02861 Clp amino terminal domain, pathogenicity island component Tmari_0875 PF07724 AAA domain (Cdc48 subfamily) Tmari_0876 PF00814 Glycoprotease family Tmari_0878 PF01545 Cation efflux family Tmari_0878 PF16916 Dimerisation domain of Zinc Transporter Tmari_0879 PF00113 Enolase, C-terminal TIM barrel domain Tmari_0879 PF03952 Enolase, N-terminal domain Tmari_0880 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Tmari_0880 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II Tmari_0880 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Tmari_0882 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Tmari_0883 PF04204 Homoserine O-succinyltransferase Tmari_0884 PF01053 Cys/Met metabolism PLP-dependent enzyme Tmari_0885 PF03309 Type III pantothenate kinase Tmari_0888 PF00905 Penicillin binding protein transpeptidase domain Tmari_0888 PF00912 Transglycosylase Tmari_0889 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Tmari_0889 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Tmari_0891 PF13288 DXP reductoisomerase C-terminal domain Tmari_0891 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Tmari_0891 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tmari_0892 PF02163 Peptidase family M50 Tmari_0892 PF17820 PDZ domain Tmari_0893 PF04551 GcpE protein Tmari_0894 PF01769 Divalent cation transporter Tmari_0894 PF03448 MgtE intracellular N domain Tmari_0894 PF00571 CBS domain Tmari_0895 PF02673 Bacitracin resistance protein BacA Tmari_0897 PF00534 Glycosyl transferases group 1 Tmari_0897 PF08323 Starch synthase catalytic domain Tmari_0898 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Tmari_0898 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Tmari_0899 PF04232 Stage V sporulation protein S (SpoVS) Tmari_0904 PF04545 Sigma-70, region 4 Tmari_0904 PF04539 Sigma-70 region 3 Tmari_0904 PF04542 Sigma-70 region 2 Tmari_0905 PF03975 CheD chemotactic sensory transduction Tmari_0906 PF04509 CheC-like family Tmari_0908 PF10609 NUBPL iron-transfer P-loop NTPase Tmari_0909 PF00448 SRP54-type protein, GTPase domain Tmari_0910 PF00771 FHIPEP family Tmari_0911 PF01312 FlhB HrpN YscU SpaS Family Tmari_0912 PF01311 Bacterial export proteins, family 1 Tmari_0913 PF01008 Initiation factor 2 subunit family Tmari_0914 PF13145 PPIC-type PPIASE domain Tmari_0915 PF03819 MazG nucleotide pyrophosphohydrolase domain Tmari_0916 PF01865 Protein of unknown function DUF47 Tmari_0917 PF01351 Ribonuclease HII Tmari_0919 PF01384 Phosphate transporter family Tmari_0920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_0922 PF00465 Iron-containing alcohol dehydrogenase Tmari_0924 PF01256 Carbohydrate kinase Tmari_0924 PF03853 YjeF-related protein N-terminus Tmari_0927 PF02390 Putative methyltransferase Tmari_0928 PF08299 Bacterial dnaA protein helix-turn-helix Tmari_0928 PF11638 DnaA N-terminal domain Tmari_0928 PF00308 Bacterial dnaA protein Tmari_0930 PF16236 Domain of unknown function (DUF4895) Tmari_0931 PF13203 Putative metallopeptidase domain Tmari_0931 PF09967 VWA-like domain (DUF2201) Tmari_0936 PF03600 Citrate transporter Tmari_0937 PF00478 IMP dehydrogenase / GMP reductase domain Tmari_0937 PF00571 CBS domain Tmari_0938 PF01979 Amidohydrolase family Tmari_0941 PF02261 Aspartate decarboxylase Tmari_0942 PF00849 RNA pseudouridylate synthase Tmari_0942 PF01479 S4 domain Tmari_0945 PF00120 Glutamine synthetase, catalytic domain Tmari_0945 PF03951 Glutamine synthetase, beta-Grasp domain Tmari_0951 PF00356 Bacterial regulatory proteins, lacI family Tmari_0954 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmari_0954 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmari_0955 PF02779 Transketolase, pyrimidine binding domain Tmari_0955 PF02780 Transketolase, C-terminal domain Tmari_0956 PF00456 Transketolase, thiamine diphosphate binding domain Tmari_0957 PF02653 Branched-chain amino acid transport system / permease component Tmari_0958 PF00005 ABC transporter Tmari_0960 PF13407 Periplasmic binding protein domain Tmari_0961 PF05025 RbsD / FucU transport protein family Tmari_0962 PF00294 pfkB family carbohydrate kinase Tmari_0963 PF04011 LemA family Tmari_0966 PF01969 Protein of unknown function DUF111 Tmari_0967 PF00731 AIR carboxylase Tmari_0968 PF02540 NAD synthase Tmari_0969 PF02899 Phage integrase, N-terminal SAM-like domain Tmari_0969 PF00589 Phage integrase family Tmari_0975 PF00990 Diguanylate cyclase, GGDEF domain Tmari_0976 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_0981 PF01206 Sulfurtransferase TusA Tmari_0985 PF04143 Sulphur transport Tmari_0986 PF01206 Sulfurtransferase TusA Tmari_0987 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain Tmari_0987 PF07703 Alpha-2-macroglobulin bait region domain Tmari_0987 PF00207 Alpha-2-macroglobulin family Tmari_0987 PF01835 MG2 domain Tmari_0987 PF07678 A-macroglobulin TED domain Tmari_0989 PF06672 Protein of unknown function (DUF1175) Tmari_0993 PF00176 SNF2 family N-terminal domain Tmari_0993 PF00271 Helicase conserved C-terminal domain Tmari_1004 PF05168 HEPN domain Tmari_1009 PF06719 AraC-type transcriptional regulator N-terminus Tmari_1009 PF12833 Helix-turn-helix domain Tmari_1010 PF00248 Aldo/keto reductase family Tmari_1012 PF00248 Aldo/keto reductase family Tmari_1018 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Tmari_1018 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Tmari_1023 PF07690 Major Facilitator Superfamily Tmari_1024 PF12146 Serine aminopeptidase, S33 Tmari_1032 PF13732 Domain of unknown function (DUF4162) Tmari_1032 PF00005 ABC transporter Tmari_1035 PF00462 Glutaredoxin Tmari_1037 PF01050 Mannose-6-phosphate isomerase Tmari_1037 PF00483 Nucleotidyl transferase Tmari_1038 PF02350 UDP-N-acetylglucosamine 2-epimerase Tmari_1039 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Tmari_1039 PF01502 Phosphoribosyl-AMP cyclohydrolase Tmari_1040 PF00977 Histidine biosynthesis protein Tmari_1041 PF00977 Histidine biosynthesis protein Tmari_1042 PF00117 Glutamine amidotransferase class-I Tmari_1043 PF00475 Imidazoleglycerol-phosphate dehydratase Tmari_1044 PF00155 Aminotransferase class I and II Tmari_1045 PF00815 Histidinol dehydrogenase Tmari_1046 PF01634 ATP phosphoribosyltransferase Tmari_1047 PF13393 Histidyl-tRNA synthetase Tmari_1048 PF12323 Helix-turn-helix domain Tmari_1048 PF01385 Probable transposase Tmari_1048 PF07282 Putative transposase DNA-binding domain Tmari_1049 PF03600 Citrate transporter Tmari_1051 PF03775 Septum formation inhibitor MinC, C-terminal domain Tmari_1052 PF05343 M42 glutamyl aminopeptidase Tmari_1053 PF05343 M42 glutamyl aminopeptidase Tmari_1054 PF05343 M42 glutamyl aminopeptidase Tmari_1056 PF10531 SLBB domain Tmari_1058 PF00005 ABC transporter Tmari_1060 PF03091 CutA1 divalent ion tolerance protein Tmari_1061 PF02254 TrkA-N domain Tmari_1061 PF07885 Ion channel Tmari_1063 PF04232 Stage V sporulation protein S (SpoVS) Tmari_1066 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Tmari_1066 PF02837 Glycosyl hydrolases family 2, sugar binding domain Tmari_1066 PF00703 Glycosyl hydrolases family 2 Tmari_1067 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1067 PF00005 ABC transporter Tmari_1068 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1068 PF00005 ABC transporter Tmari_1069 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1069 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_1070 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1071 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_1072 PF11975 Family 4 glycosyl hydrolase C-terminal domain Tmari_1072 PF02056 Family 4 glycosyl hydrolase Tmari_1073 PF00455 DeoR C terminal sensor domain Tmari_1073 PF08220 DeoR-like helix-turn-helix domain Tmari_1075 PF01261 Xylose isomerase-like TIM barrel Tmari_1077 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmari_1077 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmari_1081 PF02569 Pantoate-beta-alanine ligase Tmari_1084 PF02502 Ribose/Galactose Isomerase Tmari_1085 PF01740 STAS domain Tmari_1086 PF00717 Peptidase S24-like Tmari_1086 PF01726 LexA DNA binding domain Tmari_1087 PF01951 Archease protein family (MTH1598/TM1083) Tmari_1088 PF03989 DNA gyrase C-terminal domain, beta-propeller Tmari_1088 PF00521 DNA gyrase/topoisomerase IV, subunit A Tmari_1089 PF08264 Anticodon-binding domain of tRNA Tmari_1089 PF09334 tRNA synthetases class I (M) Tmari_1089 PF01588 Putative tRNA binding domain Tmari_1092 PF02080 TrkA-C domain Tmari_1092 PF02254 TrkA-N domain Tmari_1094 PF02386 Cation transport protein Tmari_1095 PF03129 Anticodon binding domain Tmari_1095 PF13393 Histidyl-tRNA synthetase Tmari_1098 PF00750 tRNA synthetases class I (R) Tmari_1098 PF05746 DALR anticodon binding domain Tmari_1098 PF03485 Arginyl tRNA synthetase N terminal domain Tmari_1099 PF05958 tRNA (Uracil-5-)-methyltransferase Tmari_1101 PF10397 Adenylosuccinate lyase C-terminus Tmari_1101 PF00206 Lyase Tmari_1102 PF00709 Adenylosuccinate synthetase Tmari_1103 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmari_1103 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmari_1105 PF02223 Thymidylate kinase Tmari_1107 PF12850 Calcineurin-like phosphoesterase superfamily domain Tmari_1108 PF00035 Double-stranded RNA binding motif Tmari_1108 PF14622 Ribonuclease-III-like Tmari_1126 PF13416 Bacterial extracellular solute-binding protein Tmari_1127 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1128 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1129 PF07195 Flagellar hook-associated protein 2 C-terminus Tmari_1129 PF07196 Flagellin hook IN motif Tmari_1129 PF02465 Flagellar hook-associated protein 2 N-terminus Tmari_1134 PF00210 Ferritin-like domain Tmari_1135 PF01048 Phosphorylase superfamily Tmari_1136 PF01515 Phosphate acetyl/butaryl transferase Tmari_1137 PF00155 Aminotransferase class I and II Tmari_1138 PF07726 ATPase family associated with various cellular activities (AAA) Tmari_1138 PF17863 AAA lid domain Tmari_1142 PF02653 Branched-chain amino acid transport system / permease component Tmari_1143 PF02653 Branched-chain amino acid transport system / permease component Tmari_1143 PF11862 Domain of unknown function (DUF3382) Tmari_1144 PF00005 ABC transporter Tmari_1144 PF12399 Branched-chain amino acid ATP-binding cassette transporter Tmari_1145 PF00005 ABC transporter Tmari_1146 PF00571 CBS domain Tmari_1146 PF00478 IMP dehydrogenase / GMP reductase domain Tmari_1147 PF02683 Cytochrome C biogenesis protein transmembrane region Tmari_1149 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_1151 PF01966 HD domain Tmari_1153 PF00672 HAMP domain Tmari_1153 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_1154 PF01966 HD domain Tmari_1154 PF00072 Response regulator receiver domain Tmari_1155 PF00180 Isocitrate/isopropylmalate dehydrogenase Tmari_1157 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_1158 PF00005 ABC transporter Tmari_1158 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1159 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1159 PF00005 ABC transporter Tmari_1160 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_1160 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1161 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Tmari_1162 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Tmari_1162 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Tmari_1163 PF04024 PspC domain Tmari_1165 PF00117 Glutamine amidotransferase class-I Tmari_1168 PF00571 CBS domain Tmari_1168 PF01769 Divalent cation transporter Tmari_1168 PF03448 MgtE intracellular N domain Tmari_1169 PF12706 Beta-lactamase superfamily domain Tmari_1170 PF00990 Diguanylate cyclase, GGDEF domain Tmari_1170 PF17155 Gammaproteobacterial periplasmic sensor domain Tmari_1172 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Tmari_1173 PF04055 Radical SAM superfamily Tmari_1173 PF06969 HemN C-terminal domain Tmari_1175 PF11897 Protein of unknown function (DUF3417) Tmari_1175 PF00343 Carbohydrate phosphorylase Tmari_1177 PF00072 Response regulator receiver domain Tmari_1179 PF03063 Prismane/CO dehydrogenase family Tmari_1184 PF13419 Haloacid dehalogenase-like hydrolase Tmari_1185 PF00583 Acetyltransferase (GNAT) family Tmari_1186 PF02561 Flagellar protein FliS Tmari_1188 PF00293 NUDIX domain Tmari_1189 PF02463 RecF/RecN/SMC N terminal domain Tmari_1189 PF06470 SMC proteins Flexible Hinge Domain Tmari_1190 PF00248 Aldo/keto reductase family Tmari_1191 PF03707 Bacterial signalling protein N terminal repeat Tmari_1191 PF00990 Diguanylate cyclase, GGDEF domain Tmari_1191 PF00563 EAL domain Tmari_1192 PF02142 MGS-like domain Tmari_1194 PF01594 AI-2E family transporter Tmari_1197 PF10509 Galactokinase galactose-binding signature Tmari_1197 PF00288 GHMP kinases N terminal domain Tmari_1197 PF08544 GHMP kinases C terminal Tmari_1198 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Tmari_1198 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Tmari_1200 PF00703 Glycosyl hydrolases family 2 Tmari_1200 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Tmari_1200 PF02837 Glycosyl hydrolases family 2, sugar binding domain Tmari_1200 PF16353 Domain of unknown function(DUF4981) Tmari_1200 PF02929 Beta galactosidase small chain Tmari_1201 PF00005 ABC transporter Tmari_1201 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1202 PF02449 Beta-galactosidase Tmari_1202 PF08533 Beta-galactosidase C-terminal domain Tmari_1202 PF08532 Beta-galactosidase trimerisation domain Tmari_1203 PF00005 ABC transporter Tmari_1203 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1204 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_1204 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1205 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1208 PF07745 Glycosyl hydrolase family 53 Tmari_1209 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1210 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1210 PF14785 Maltose transport system permease protein MalF P2 domain Tmari_1211 PF01547 Bacterial extracellular solute-binding protein Tmari_1212 PF01899 Na+/H+ ion antiporter subunit Tmari_1213 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Tmari_1216 PF13244 Domain of unknown function (DUF4040) Tmari_1216 PF00361 Proton-conducting membrane transporter Tmari_1216 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Tmari_1216 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Tmari_1217 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Tmari_1218 PF00361 Proton-conducting membrane transporter Tmari_1219 PF00361 Proton-conducting membrane transporter Tmari_1221 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Tmari_1222 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Tmari_1222 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tmari_1223 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Tmari_1224 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tmari_1224 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_1226 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1226 PF00005 ABC transporter Tmari_1227 PF00005 ABC transporter Tmari_1227 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1228 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1228 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_1229 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_1231 PF00480 ROK family Tmari_1231 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tmari_1232 PF04041 beta-1,4-mannooligosaccharide phosphorylase Tmari_1233 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_1235 PF01418 Helix-turn-helix domain, rpiR family Tmari_1235 PF01380 SIS domain Tmari_1236 PF00535 Glycosyl transferase family 2 Tmari_1237 PF00534 Glycosyl transferases group 1 Tmari_1238 PF09261 Alpha mannosidase middle domain Tmari_1238 PF07748 Glycosyl hydrolases family 38 C-terminal domain Tmari_1238 PF01074 Glycosyl hydrolases family 38 N-terminal domain Tmari_1239 PF08402 TOBE domain Tmari_1239 PF00005 ABC transporter Tmari_1240 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1241 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1244 PF00580 UvrD/REP helicase N-terminal domain Tmari_1244 PF13361 UvrD-like helicase C-terminal domain Tmari_1246 PF06071 Protein of unknown function (DUF933) Tmari_1246 PF01926 50S ribosome-binding GTPase Tmari_1248 PF01259 SAICAR synthetase Tmari_1249 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Tmari_1251 PF00586 AIR synthase related protein, N-terminal domain Tmari_1251 PF02769 AIR synthase related protein, C-terminal domain Tmari_1251 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Tmari_1251 PF16904 Phosphoribosylformylglycinamidine synthase II C-terminus Tmari_1252 PF00156 Phosphoribosyl transferase domain Tmari_1253 PF00551 Formyl transferase Tmari_1254 PF02142 MGS-like domain Tmari_1254 PF01808 AICARFT/IMPCHase bienzyme Tmari_1255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Tmari_1255 PF02843 Phosphoribosylglycinamide synthetase, C domain Tmari_1255 PF02844 Phosphoribosylglycinamide synthetase, N domain Tmari_1256 PF00586 AIR synthase related protein, N-terminal domain Tmari_1256 PF02769 AIR synthase related protein, C-terminal domain Tmari_1258 PF00795 Carbon-nitrogen hydrolase Tmari_1258 PF02540 NAD synthase Tmari_1259 PF13419 Haloacid dehalogenase-like hydrolase Tmari_1260 PF00155 Aminotransferase class I and II Tmari_1261 PF00664 ABC transporter transmembrane region Tmari_1261 PF00005 ABC transporter Tmari_1263 PF00512 His Kinase A (phospho-acceptor) domain Tmari_1263 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_1264 PF00486 Transcriptional regulatory protein, C terminal Tmari_1264 PF00072 Response regulator receiver domain Tmari_1265 PF01895 PhoU domain Tmari_1266 PF00005 ABC transporter Tmari_1267 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1269 PF12849 PBP superfamily domain Tmari_1274 PF04055 Radical SAM superfamily Tmari_1274 PF06968 Biotin and Thiamin Synthesis associated domain Tmari_1275 PF01053 Cys/Met metabolism PLP-dependent enzyme Tmari_1276 PF07963 Prokaryotic N-terminal methylation motif Tmari_1276 PF00114 Pilin (bacterial filament) Tmari_1277 PF01425 Amidase Tmari_1278 PF02934 GatB/GatE catalytic domain Tmari_1278 PF02637 GatB domain Tmari_1281 PF17912 MalK OB fold domain Tmari_1281 PF00005 ABC transporter Tmari_1281 PF03459 TOBE domain Tmari_1282 PF02491 SHS2 domain inserted in FTSA Tmari_1283 PF01713 Smr domain Tmari_1283 PF00488 MutS domain V Tmari_1286 PF02056 Family 4 glycosyl hydrolase Tmari_1286 PF11975 Family 4 glycosyl hydrolase C-terminal domain Tmari_1287 PF00535 Glycosyl transferase family 2 Tmari_1289 PF02660 Glycerol-3-phosphate acyltransferase Tmari_1290 PF00355 Rieske [2Fe-2S] domain Tmari_1293 PF01717 Cobalamin-independent synthase, Catalytic domain Tmari_1293 PF08267 Cobalamin-independent synthase, N-terminal domain Tmari_1294 PF07883 Cupin domain Tmari_1296 PF01018 GTP1/OBG Tmari_1296 PF01926 50S ribosome-binding GTPase Tmari_1296 PF04055 Radical SAM superfamily Tmari_1299 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tmari_1300 PF10609 NUBPL iron-transfer P-loop NTPase Tmari_1301 PF01209 ubiE/COQ5 methyltransferase family Tmari_1303 PF16123 Hydroxyacylglutathione hydrolase C-terminus Tmari_1303 PF00753 Metallo-beta-lactamase superfamily Tmari_1305 PF00248 Aldo/keto reductase family Tmari_1309 PF00005 ABC transporter Tmari_1316 PF00664 ABC transporter transmembrane region Tmari_1316 PF00005 ABC transporter Tmari_1319 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Tmari_1321 PF00931 NB-ARC domain Tmari_1321 PF13176 Tetratricopeptide repeat Tmari_1325 PF00005 ABC transporter Tmari_1325 PF00664 ABC transporter transmembrane region Tmari_1326 PF00664 ABC transporter transmembrane region Tmari_1326 PF00005 ABC transporter Tmari_1327 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system Tmari_1330 PF13186 Iron-sulfur cluster-binding domain Tmari_1330 PF04055 Radical SAM superfamily Tmari_1331 PF06463 Molybdenum Cofactor Synthesis C Tmari_1331 PF04055 Radical SAM superfamily Tmari_1334 PF00005 ABC transporter Tmari_1335 PF00005 ABC transporter Tmari_1335 PF00664 ABC transporter transmembrane region Tmari_1347 PF00355 Rieske [2Fe-2S] domain Tmari_1351 PF00312 Ribosomal protein S15 Tmari_1352 PF03725 3' exoribonuclease family, domain 2 Tmari_1352 PF01138 3' exoribonuclease family, domain 1 Tmari_1352 PF00575 S1 RNA binding domain Tmari_1352 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tmari_1352 PF00013 KH domain Tmari_1353 PF05193 Peptidase M16 inactive domain Tmari_1353 PF00675 Insulinase (Peptidase family M16) Tmari_1354 PF00478 IMP dehydrogenase / GMP reductase domain Tmari_1354 PF00571 CBS domain Tmari_1356 PF01594 AI-2E family transporter Tmari_1357 PF12146 Serine aminopeptidase, S33 Tmari_1358 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tmari_1361 PF00571 CBS domain Tmari_1361 PF00478 IMP dehydrogenase / GMP reductase domain Tmari_1364 PF01139 tRNA-splicing ligase RtcB Tmari_1366 PF00989 PAS fold Tmari_1366 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_1366 PF00512 His Kinase A (phospho-acceptor) domain Tmari_1367 PF00072 Response regulator receiver domain Tmari_1367 PF00486 Transcriptional regulatory protein, C terminal Tmari_1368 PF06827 Zinc finger found in FPG and IleRS Tmari_1368 PF00133 tRNA synthetases class I (I, L, M and V) Tmari_1368 PF08264 Anticodon-binding domain of tRNA Tmari_1369 PF00437 Type II/IV secretion system protein Tmari_1370 PF03462 PCRF domain Tmari_1370 PF00472 RF-1 domain Tmari_1371 PF00460 Flagella basal body rod protein Tmari_1372 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmari_1372 PF00460 Flagella basal body rod protein Tmari_1373 PF02049 Flagellar hook-basal body complex protein FliE Tmari_1375 PF00005 ABC transporter Tmari_1376 PF01458 Uncharacterized protein family (UPF0051) Tmari_1377 PF01458 Uncharacterized protein family (UPF0051) Tmari_1378 PF00266 Aminotransferase class-V Tmari_1379 PF01592 NifU-like N terminal domain Tmari_1381 PF00300 Histidine phosphatase superfamily (branch 1) Tmari_1382 PF13416 Bacterial extracellular solute-binding protein Tmari_1383 PF08402 TOBE domain Tmari_1383 PF00005 ABC transporter Tmari_1384 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1385 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1386 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Tmari_1386 PF02403 Seryl-tRNA synthetase N-terminal domain Tmari_1387 PF04452 RNA methyltransferase Tmari_1390 PF00288 GHMP kinases N terminal domain Tmari_1391 PF00156 Phosphoribosyl transferase domain Tmari_1392 PF00342 Phosphoglucose isomerase Tmari_1394 PF01121 Dephospho-CoA kinase Tmari_1398 PF02861 Clp amino terminal domain, pathogenicity island component Tmari_1398 PF07724 AAA domain (Cdc48 subfamily) Tmari_1398 PF00004 ATPase family associated with various cellular activities (AAA) Tmari_1398 PF17871 AAA lid domain Tmari_1398 PF10431 C-terminal, D2-small domain, of ClpB protein Tmari_1400 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tmari_1401 PF01430 Hsp33 protein Tmari_1403 PF01411 tRNA synthetases class II (A) Tmari_1403 PF02272 DHHA1 domain Tmari_1403 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmari_1405 PF01255 Putative undecaprenyl diphosphate synthase Tmari_1406 PF01765 Ribosome recycling factor Tmari_1407 PF00266 Aminotransferase class-V Tmari_1408 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Tmari_1408 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Tmari_1410 PF13732 Domain of unknown function (DUF4162) Tmari_1410 PF00005 ABC transporter Tmari_1411 PF01061 ABC-2 type transporter Tmari_1412 PF00534 Glycosyl transferases group 1 Tmari_1412 PF13439 Glycosyltransferase Family 4 Tmari_1417 PF03537 Glycoside-hydrolase family GH114 Tmari_1420 PF08244 Glycosyl hydrolases family 32 C terminal Tmari_1420 PF00251 Glycosyl hydrolases family 32 N-terminal domain Tmari_1421 PF00459 Inositol monophosphatase family Tmari_1422 PF01458 Uncharacterized protein family (UPF0051) Tmari_1423 PF00005 ABC transporter Tmari_1424 PF00483 Nucleotidyl transferase Tmari_1424 PF01066 CDP-alcohol phosphatidyltransferase Tmari_1431 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Tmari_1431 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Tmari_1431 PF00037 4Fe-4S binding domain Tmari_1432 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Tmari_1432 PF02256 Iron hydrogenase small subunit Tmari_1432 PF02906 Iron only hydrogenase large subunit, C-terminal domain Tmari_1432 PF00037 4Fe-4S binding domain Tmari_1433 PF06971 Putative DNA-binding protein N-terminus Tmari_1433 PF02629 CoA binding domain Tmari_1434 PF17200 Single Cache domain 2 Tmari_1434 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Tmari_1434 PF00672 HAMP domain Tmari_1435 PF00230 Major intrinsic protein Tmari_1436 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Tmari_1436 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Tmari_1437 PF04309 Glycerol-3-phosphate responsive antiterminator Tmari_1438 PF04324 BFD-like [2Fe-2S] binding domain Tmari_1438 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_1439 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_1439 PF04324 BFD-like [2Fe-2S] binding domain Tmari_1443 PF00398 Ribosomal RNA adenine dimethylase Tmari_1444 PF09210 Domain of unknown function (DUF1957) Tmari_1444 PF03065 Glycosyl hydrolase family 57 Tmari_1446 PF01008 Initiation factor 2 subunit family Tmari_1446 PF03061 Thioesterase superfamily Tmari_1447 PF01336 OB-fold nucleic acid binding domain Tmari_1447 PF02938 GAD domain Tmari_1447 PF00152 tRNA synthetases class II (D, K and N) Tmari_1448 PF01740 STAS domain Tmari_1449 PF02224 Cytidylate kinase Tmari_1450 PF02401 LytB protein Tmari_1451 PF00575 S1 RNA binding domain Tmari_1452 PF01926 50S ribosome-binding GTPase Tmari_1452 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Tmari_1453 PF02660 Glycerol-3-phosphate acyltransferase Tmari_1456 PF17757 UvrB interaction domain Tmari_1456 PF00271 Helicase conserved C-terminal domain Tmari_1456 PF00270 DEAD/DEAH box helicase Tmari_1456 PF02559 CarD-like/TRCF domain Tmari_1456 PF03461 TRCF domain Tmari_1457 PF04539 Sigma-70 region 3 Tmari_1457 PF03979 Sigma-70 factor, region 1.1 Tmari_1457 PF04545 Sigma-70, region 4 Tmari_1457 PF00140 Sigma-70 factor, region 1.2 Tmari_1457 PF04542 Sigma-70 region 2 Tmari_1458 PF01807 CHC2 zinc finger Tmari_1458 PF08275 DNA primase catalytic core, N-terminal domain Tmari_1459 PF00380 Ribosomal protein S9/S16 Tmari_1460 PF00572 Ribosomal protein L13 Tmari_1461 PF12822 ECF transporter, substrate-specific component Tmari_1462 PF01016 Ribosomal L27 protein Tmari_1464 PF00829 Ribosomal prokaryotic L21 protein Tmari_1467 PF02096 60Kd inner membrane protein Tmari_1468 PF01809 Putative membrane protein insertion efficiency factor Tmari_1469 PF00825 Ribonuclease P Tmari_1470 PF00468 Ribosomal protein L34 Tmari_1471 PF04227 Indigoidine synthase A like protein Tmari_1472 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tmari_1472 PF12557 Cob(I)alamin adenosyltransferase N terminal Tmari_1473 PF01926 50S ribosome-binding GTPase Tmari_1474 PF01966 HD domain Tmari_1476 PF02645 Uncharacterised protein, DegV family COG1307 Tmari_1477 PF00480 ROK family Tmari_1478 PF07498 Rho termination factor, N-terminal domain Tmari_1478 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmari_1478 PF07497 Rho termination factor, RNA-binding domain Tmari_1479 PF01196 Ribosomal protein L17 Tmari_1480 PF01000 RNA polymerase Rpb3/RpoA insert domain Tmari_1480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Tmari_1480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Tmari_1481 PF00163 Ribosomal protein S4/S9 N-terminal domain Tmari_1481 PF01479 S4 domain Tmari_1482 PF00411 Ribosomal protein S11 Tmari_1483 PF00416 Ribosomal protein S13/S18 Tmari_1484 PF00444 Ribosomal protein L36 Tmari_1485 PF01176 Translation initiation factor 1A / IF-1 Tmari_1486 PF00557 Metallopeptidase family M24 Tmari_1487 PF05191 Adenylate kinase, active site lid Tmari_1488 PF00344 SecY translocase Tmari_1489 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Tmari_1490 PF00327 Ribosomal protein L30p/L7e Tmari_1491 PF03719 Ribosomal protein S5, C-terminal domain Tmari_1491 PF00333 Ribosomal protein S5, N-terminal domain Tmari_1492 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Tmari_1493 PF00347 Ribosomal protein L6 Tmari_1494 PF00410 Ribosomal protein S8 Tmari_1495 PF00253 Ribosomal protein S14p/S29e Tmari_1496 PF00673 ribosomal L5P family C-terminus Tmari_1496 PF00281 Ribosomal protein L5 Tmari_1497 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Tmari_1497 PF00467 KOW motif Tmari_1498 PF00238 Ribosomal protein L14p/L23e Tmari_1499 PF00366 Ribosomal protein S17 Tmari_1500 PF00831 Ribosomal L29 protein Tmari_1501 PF00252 Ribosomal protein L16p/L10e Tmari_1502 PF00189 Ribosomal protein S3, C-terminal domain Tmari_1502 PF07650 KH domain Tmari_1503 PF00237 Ribosomal protein L22p/L17e Tmari_1504 PF00203 Ribosomal protein S19 Tmari_1505 PF03947 Ribosomal Proteins L2, C-terminal domain Tmari_1505 PF00181 Ribosomal Proteins L2, RNA binding domain Tmari_1506 PF00276 Ribosomal protein L23 Tmari_1507 PF00573 Ribosomal protein L4/L1 family Tmari_1508 PF00297 Ribosomal protein L3 Tmari_1509 PF00338 Ribosomal protein S10p/S20e Tmari_1510 PF00009 Elongation factor Tu GTP binding domain Tmari_1510 PF03144 Elongation factor Tu domain 2 Tmari_1510 PF03143 Elongation factor Tu C-terminal domain Tmari_1511 PF00009 Elongation factor Tu GTP binding domain Tmari_1511 PF03144 Elongation factor Tu domain 2 Tmari_1511 PF00679 Elongation factor G C-terminus Tmari_1511 PF03764 Elongation factor G, domain IV Tmari_1511 PF14492 Elongation Factor G, domain II Tmari_1512 PF00177 Ribosomal protein S7p/S5e Tmari_1513 PF00164 Ribosomal protein S12/S23 Tmari_1515 PF02562 PhoH-like protein Tmari_1516 PF01966 HD domain Tmari_1516 PF07697 7TM-HD extracellular Tmari_1516 PF07698 7TM receptor with intracellular HD hydrolase Tmari_1517 PF02130 Uncharacterized protein family UPF0054 Tmari_1519 PF04298 Putative neutral zinc metallopeptidase Tmari_1520 PF01029 NusB family Tmari_1520 PF01189 16S rRNA methyltransferase RsmB/F Tmari_1521 PF05636 HIGH Nucleotidyl Transferase Tmari_1524 PF07687 Peptidase dimerisation domain Tmari_1524 PF01546 Peptidase family M20/M25/M40 Tmari_1525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tmari_1525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tmari_1526 PF01842 ACT domain Tmari_1526 PF00696 Amino acid kinase family Tmari_1526 PF13840 ACT domain Tmari_1527 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Tmari_1527 PF00132 Bacterial transferase hexapeptide (six repeats) Tmari_1527 PF14602 Hexapeptide repeat of succinyl-transferase Tmari_1528 PF05173 Dihydrodipicolinate reductase, C-terminus Tmari_1528 PF01113 Dihydrodipicolinate reductase, N-terminus Tmari_1529 PF00701 Dihydrodipicolinate synthetase family Tmari_1530 PF01678 Diaminopimelate epimerase Tmari_1531 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tmari_1531 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tmari_1535 PF02082 Transcriptional regulator Tmari_1536 PF01040 UbiA prenyltransferase family Tmari_1538 PF01012 Electron transfer flavoprotein domain Tmari_1539 PF01012 Electron transfer flavoprotein domain Tmari_1539 PF00766 Electron transfer flavoprotein FAD-binding domain Tmari_1543 PF00348 Polyprenyl synthetase Tmari_1545 PF02310 B12 binding domain Tmari_1545 PF04055 Radical SAM superfamily Tmari_1547 PF02119 Flagellar P-ring protein Tmari_1548 PF02107 Flagellar L-ring protein Tmari_1550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmari_1550 PF00460 Flagella basal body rod protein Tmari_1551 PF00460 Flagella basal body rod protein Tmari_1551 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Tmari_1553 PF03652 Holliday junction resolvase Tmari_1554 PF10141 Single-strand DNA-specific exonuclease, C terminal domain Tmari_1554 PF17768 RecJ OB domain Tmari_1554 PF02272 DHHA1 domain Tmari_1554 PF01368 DHH family Tmari_1555 PF01966 HD domain Tmari_1556 PF02719 Polysaccharide biosynthesis protein Tmari_1557 PF00953 Glycosyl transferase family 4 Tmari_1558 PF07136 Protein of unknown function (DUF1385) Tmari_1559 PF01871 AMMECR1 Tmari_1561 PF02424 ApbE family Tmari_1564 PF02545 Maf-like protein Tmari_1565 PF04002 RadC-like JAB domain Tmari_1567 PF01791 DeoC/LacD family aldolase Tmari_1569 PF01702 Queuine tRNA-ribosyltransferase Tmari_1572 PF00708 Acylphosphatase Tmari_1573 PF02978 Signal peptide binding domain Tmari_1573 PF00448 SRP54-type protein, GTPase domain Tmari_1573 PF02881 SRP54-type protein, helical bundle domain Tmari_1574 PF00886 Ribosomal protein S16 Tmari_1576 PF05239 PRC-barrel domain Tmari_1576 PF01782 RimM N-terminal domain Tmari_1577 PF01746 tRNA (Guanine-1)-methyltransferase Tmari_1578 PF09936 SAM-dependent RNA methyltransferase Tmari_1579 PF01245 Ribosomal protein L19 Tmari_1580 PF10502 Signal peptidase, peptidase S26 Tmari_1582 PF01416 tRNA pseudouridine synthase Tmari_1584 PF01728 FtsJ-like methyltransferase Tmari_1584 PF01479 S4 domain Tmari_1586 PF01043 SecA preprotein cross-linking domain Tmari_1586 PF00271 Helicase conserved C-terminal domain Tmari_1586 PF07517 SecA DEAD-like domain Tmari_1586 PF07516 SecA Wing and Scaffold domain Tmari_1587 PF00472 RF-1 domain Tmari_1587 PF03462 PCRF domain Tmari_1588 PF00158 Sigma-54 interaction domain Tmari_1588 PF00072 Response regulator receiver domain Tmari_1588 PF02954 Bacterial regulatory protein, Fis family Tmari_1592 PF00156 Phosphoribosyl transferase domain Tmari_1593 PF05161 MOFRL family Tmari_1593 PF13660 Domain of unknown function (DUF4147) Tmari_1596 PF00990 Diguanylate cyclase, GGDEF domain Tmari_1598 PF00707 Translation initiation factor IF-3, C-terminal domain Tmari_1598 PF05198 Translation initiation factor IF-3, N-terminal domain Tmari_1599 PF01632 Ribosomal protein L35 Tmari_1600 PF00453 Ribosomal protein L20 Tmari_1601 PF10609 NUBPL iron-transfer P-loop NTPase Tmari_1602 PF05230 MASE2 domain Tmari_1602 PF00990 Diguanylate cyclase, GGDEF domain Tmari_1603 PF02272 DHHA1 domain Tmari_1603 PF01368 DHH family Tmari_1604 PF01048 Phosphorylase superfamily Tmari_1605 PF01168 Alanine racemase, N-terminal domain Tmari_1606 PF08281 Sigma-70, region 4 Tmari_1606 PF04542 Sigma-70 region 2 Tmari_1609 PF04055 Radical SAM superfamily Tmari_1609 PF00919 Uncharacterized protein family UPF0004 Tmari_1609 PF18693 TRAM domain Tmari_1610 PF02829 3H domain Tmari_1610 PF08279 HTH domain Tmari_1611 PF07690 Major Facilitator Superfamily Tmari_1612 PF00696 Amino acid kinase family Tmari_1613 PF00889 Elongation factor TS Tmari_1614 PF00575 S1 RNA binding domain Tmari_1614 PF10150 Ribonuclease E/G family Tmari_1615 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Tmari_1615 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Tmari_1616 PF02645 Uncharacterised protein, DegV family COG1307 Tmari_1617 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Tmari_1618 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmari_1618 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmari_1619 PF00231 ATP synthase Tmari_1620 PF02874 ATP synthase alpha/beta family, beta-barrel domain Tmari_1620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Tmari_1620 PF00306 ATP synthase alpha/beta chain, C terminal domain Tmari_1621 PF00213 ATP synthase delta (OSCP) subunit Tmari_1622 PF00430 ATP synthase B/B' CF(0) Tmari_1623 PF00137 ATP synthase subunit C Tmari_1624 PF00119 ATP synthase A chain Tmari_1627 PF13690 Chemotaxis phosphatase CheX Tmari_1628 PF01367 5'-3' exonuclease, C-terminal SAM fold Tmari_1628 PF00476 DNA polymerase family A Tmari_1628 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Tmari_1628 PF01612 3'-5' exonuclease Tmari_1629 PF02627 Carboxymuconolactone decarboxylase family Tmari_1630 PF03009 Glycerophosphoryl diester phosphodiesterase family Tmari_1632 PF00679 Elongation factor G C-terminus Tmari_1632 PF06421 GTP-binding protein LepA C-terminus Tmari_1632 PF03144 Elongation factor Tu domain 2 Tmari_1632 PF00009 Elongation factor Tu GTP binding domain Tmari_1633 PF00703 Glycosyl hydrolases family 2 Tmari_1633 PF02929 Beta galactosidase small chain Tmari_1633 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Tmari_1633 PF02837 Glycosyl hydrolases family 2, sugar binding domain Tmari_1633 PF16353 Domain of unknown function(DUF4981) Tmari_1635 PF01195 Peptidyl-tRNA hydrolase Tmari_1636 PF01386 Ribosomal L25p family Tmari_1636 PF14693 Ribosomal protein TL5, C-terminal domain Tmari_1637 PF14572 Phosphoribosyl synthetase-associated domain Tmari_1637 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Tmari_1638 PF12804 MobA-like NTP transferase domain Tmari_1638 PF00132 Bacterial transferase hexapeptide (six repeats) Tmari_1638 PF14602 Hexapeptide repeat of succinyl-transferase Tmari_1641 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Tmari_1642 PF02190 ATP-dependent protease La (LON) substrate-binding domain Tmari_1642 PF05362 Lon protease (S16) C-terminal proteolytic domain Tmari_1642 PF00004 ATPase family associated with various cellular activities (AAA) Tmari_1644 PF12320 Type 5 capsule protein repressor C-terminal domain Tmari_1644 PF00149 Calcineurin-like phosphoesterase Tmari_1645 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Tmari_1647 PF00005 ABC transporter Tmari_1648 PF00175 Oxidoreductase NAD-binding domain Tmari_1648 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Tmari_1648 PF00970 Oxidoreductase FAD-binding domain Tmari_1649 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Tmari_1649 PF07992 Pyridine nucleotide-disulphide oxidoreductase Tmari_1650 PF00186 Dihydrofolate reductase Tmari_1651 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Tmari_1651 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Tmari_1651 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Tmari_1651 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Tmari_1652 PF03447 Homoserine dehydrogenase, NAD binding domain Tmari_1652 PF01958 Domain of unknown function DUF108 Tmari_1653 PF02445 Quinolinate synthetase A protein Tmari_1654 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Tmari_1654 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Tmari_1657 PF01966 HD domain Tmari_1659 PF00128 Alpha amylase, catalytic domain Tmari_1660 PF00009 Elongation factor Tu GTP binding domain Tmari_1660 PF03764 Elongation factor G, domain IV Tmari_1660 PF14492 Elongation Factor G, domain II Tmari_1660 PF00679 Elongation factor G C-terminus Tmari_1662 PF00591 Glycosyl transferase family, a/b domain Tmari_1662 PF02885 Glycosyl transferase family, helical bundle domain Tmari_1662 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Tmari_1663 PF16736 Single Cache-like Tmari_1663 PF00989 PAS fold Tmari_1663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Tmari_1663 PF00512 His Kinase A (phospho-acceptor) domain Tmari_1664 PF00072 Response regulator receiver domain Tmari_1664 PF00486 Transcriptional regulatory protein, C terminal Tmari_1666 PF01649 Ribosomal protein S20 Tmari_1667 PF00438 S-adenosylmethionine synthetase, N-terminal domain Tmari_1667 PF02772 S-adenosylmethionine synthetase, central domain Tmari_1667 PF02773 S-adenosylmethionine synthetase, C-terminal domain Tmari_1670 PF01327 Polypeptide deformylase Tmari_1671 PF01975 Survival protein SurE Tmari_1672 PF00005 ABC transporter Tmari_1673 PF05175 Methyltransferase small domain Tmari_1675 PF07687 Peptidase dimerisation domain Tmari_1675 PF01546 Peptidase family M20/M25/M40 Tmari_1676 PF01261 Xylose isomerase-like TIM barrel Tmari_1680 PF01312 FlhB HrpN YscU SpaS Family Tmari_1686 PF01966 HD domain Tmari_1686 PF11871 Domain of unknown function (DUF3391) Tmari_1690 PF00072 Response regulator receiver domain Tmari_1691 PF00313 'Cold-shock' DNA-binding domain Tmari_1692 PF01197 Ribosomal protein L31 Tmari_1693 PF00013 KH domain Tmari_1693 PF00575 S1 RNA binding domain Tmari_1693 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Tmari_1693 PF01138 3' exoribonuclease family, domain 1 Tmari_1693 PF03725 3' exoribonuclease family, domain 2 Tmari_1694 PF01476 LysM domain Tmari_1694 PF03734 L,D-transpeptidase catalytic domain Tmari_1695 PF04127 DNA / pantothenate metabolism flavoprotein Tmari_1695 PF02441 Flavoprotein Tmari_1696 PF01192 RNA polymerase Rpb6 Tmari_1697 PF00625 Guanylate kinase Tmari_1698 PF04025 Domain of unknown function (DUF370) Tmari_1700 PF00266 Aminotransferase class-V Tmari_1702 PF02568 Thiamine biosynthesis protein (ThiI) Tmari_1702 PF02926 THUMP domain Tmari_1704 PF06750 Bacterial Peptidase A24 N-terminal domain Tmari_1704 PF01478 Type IV leader peptidase family Tmari_1705 PF17785 PUA-like domain Tmari_1705 PF10672 S-adenosylmethionine-dependent methyltransferase Tmari_1706 PF00155 Aminotransferase class I and II Tmari_1709 PF01554 MatE Tmari_1711 PF00884 Sulfatase Tmari_1713 PF00152 tRNA synthetases class II (D, K and N) Tmari_1713 PF01336 OB-fold nucleic acid binding domain Tmari_1714 PF03449 Transcription elongation factor, N-terminal Tmari_1714 PF01272 Transcription elongation factor, GreA/GreB, C-term Tmari_1715 PF03477 ATP cone domain Tmari_1716 PF02650 WhiA C-terminal HTH domain Tmari_1716 PF14527 WhiA LAGLIDADG-like domain Tmari_1717 PF01933 Uncharacterised protein family UPF0052 Tmari_1718 PF03668 P-loop ATPase protein family Tmari_1721 PF01205 Uncharacterized protein family UPF0029 Tmari_1721 PF09186 Domain of unknown function (DUF1949) Tmari_1722 PF01565 FAD binding domain Tmari_1722 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Tmari_1723 PF04055 Radical SAM superfamily Tmari_1725 PF16745 RsgA N-terminal domain Tmari_1725 PF03193 RsgA GTPase Tmari_1726 PF00834 Ribulose-phosphate 3 epimerase family Tmari_1727 PF00488 MutS domain V Tmari_1727 PF05192 MutS domain III Tmari_1727 PF05190 MutS family domain IV Tmari_1727 PF05188 MutS domain II Tmari_1727 PF01624 MutS domain I Tmari_1728 PF13673 Acetyltransferase (GNAT) domain Tmari_1731 PF01979 Amidohydrolase family Tmari_1733 PF01813 ATP synthase subunit D Tmari_1734 PF02272 DHHA1 domain Tmari_1734 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Tmari_1734 PF01411 tRNA synthetases class II (A) Tmari_1736 PF02548 Ketopantoate hydroxymethyltransferase Tmari_1738 PF05496 Holliday junction DNA helicase RuvB P-loop domain Tmari_1738 PF05491 RuvB C-terminal winged helix domain Tmari_1738 PF17864 RuvB AAA lid domain Tmari_1739 PF01168 Alanine racemase, N-terminal domain Tmari_1740 PF02325 YGGT family Tmari_1741 PF01513 ATP-NAD kinase Tmari_1742 PF01895 PhoU domain Tmari_1744 PF00772 DnaB-like helicase N terminal domain Tmari_1744 PF03796 DnaB-like helicase C terminal domain Tmari_1745 PF01048 Phosphorylase superfamily Tmari_1746 PF02535 ZIP Zinc transporter Tmari_1748 PF00636 Ribonuclease III domain Tmari_1749 PF08032 RNA 2'-O ribose methyltransferase substrate binding Tmari_1749 PF00588 SpoU rRNA Methylase family Tmari_1750 PF13344 Haloacid dehalogenase-like hydrolase Tmari_1751 PF00248 Aldo/keto reductase family Tmari_1752 PF01212 Beta-eliminating lyase Tmari_1754 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Tmari_1755 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1756 PF12911 N-terminal TM domain of oligopeptide transport permease C Tmari_1756 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1757 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1757 PF00005 ABC transporter Tmari_1758 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Tmari_1758 PF00005 ABC transporter Tmari_1759 PF00150 Cellulase (glycosyl hydrolase family 5) Tmari_1759 PF03425 Carbohydrate binding domain (family 11) Tmari_1759 PF00404 Dockerin type I domain Tmari_1761 PF00271 Helicase conserved C-terminal domain Tmari_1761 PF17757 UvrB interaction domain Tmari_1761 PF12344 Ultra-violet resistance protein B Tmari_1761 PF02151 UvrB/uvrC motif Tmari_1761 PF04851 Type III restriction enzyme, res subunit Tmari_1762 PF00871 Acetokinase family Tmari_1763 PF01515 Phosphate acetyl/butaryl transferase Tmari_1764 PF00871 Acetokinase family Tmari_1770 PF04851 Type III restriction enzyme, res subunit Tmari_1770 PF02151 UvrB/uvrC motif Tmari_1770 PF12344 Ultra-violet resistance protein B Tmari_1770 PF00271 Helicase conserved C-terminal domain Tmari_1770 PF17757 UvrB interaction domain Tmari_1771 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tmari_1771 PF02780 Transketolase, C-terminal domain Tmari_1771 PF02779 Transketolase, pyrimidine binding domain Tmari_1772 PF09285 Elongation factor P, C-terminal Tmari_1772 PF08207 Elongation factor P (EF-P) KOW-like domain Tmari_1772 PF01132 Elongation factor P (EF-P) OB domain Tmari_1774 PF01029 NusB family Tmari_1775 PF01268 Formate--tetrahydrofolate ligase Tmari_1776 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Tmari_1776 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Tmari_1777 PF02601 Exonuclease VII, large subunit Tmari_1777 PF13742 OB-fold nucleic acid binding domain Tmari_1778 PF02609 Exonuclease VII small subunit Tmari_1779 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Tmari_1779 PF02780 Transketolase, C-terminal domain Tmari_1779 PF02779 Transketolase, pyrimidine binding domain Tmari_1781 PF02734 DAK2 domain Tmari_1781 PF13684 Dihydroxyacetone kinase family Tmari_1783 PF01676 Metalloenzyme superfamily Tmari_1783 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tmari_1786 PF01475 Ferric uptake regulator family Tmari_1787 PF13184 NusA-like KH domain Tmari_1787 PF00575 S1 RNA binding domain Tmari_1787 PF08529 NusA N-terminal domain Tmari_1788 PF02576 RimP N-terminal domain Tmari_1788 PF17384 RimP C-terminal SH3 domain Tmari_1789 PF00764 Arginosuccinate synthase Tmari_1790 PF00206 Lyase Tmari_1791 PF02774 Semialdehyde dehydrogenase, dimerisation domain Tmari_1791 PF01118 Semialdehyde dehydrogenase, NAD binding domain Tmari_1792 PF01960 ArgJ family Tmari_1793 PF00696 Amino acid kinase family Tmari_1794 PF00202 Aminotransferase class-III Tmari_1797 PF00563 EAL domain Tmari_1797 PF03707 Bacterial signalling protein N terminal repeat Tmari_1797 PF00990 Diguanylate cyclase, GGDEF domain Tmari_1801 PF09701 CRISPR-associated protein (Cas_Cmr5) Tmari_1806 PF09827 CRISPR associated protein Cas2 Tmari_1807 PF01867 CRISPR associated protein Cas1 Tmari_1809 PF18395 Cas3 C-terminal domain Tmari_1809 PF18019 HD domain Tmari_1809 PF00270 DEAD/DEAH box helicase Tmari_1814 PF01556 DnaJ C terminal domain Tmari_1814 PF00684 DnaJ central domain Tmari_1814 PF00226 DnaJ domain Tmari_1818 PF03787 RAMP superfamily Tmari_1820 PF03787 RAMP superfamily Tmari_1822 PF18211 Csm1 subunit domain B Tmari_1827 PF00133 tRNA synthetases class I (I, L, M and V) Tmari_1827 PF08264 Anticodon-binding domain of tRNA Tmari_1827 PF10458 Valyl tRNA synthetase tRNA binding arm Tmari_1828 PF02417 Chromate transporter Tmari_1830 PF02568 Thiamine biosynthesis protein (ThiI) Tmari_1830 PF00958 GMP synthase C terminal domain Tmari_1830 PF00117 Glutamine amidotransferase class-I Tmari_1832 PF12221 Bacterial membrane protein N terminal Tmari_1832 PF01145 SPFH domain / Band 7 family Tmari_1833 PF01145 SPFH domain / Band 7 family Tmari_1835 PF00885 6,7-dimethyl-8-ribityllumazine synthase Tmari_1836 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Tmari_1836 PF00925 GTP cyclohydrolase II Tmari_1837 PF00677 Lumazine binding domain Tmari_1838 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Tmari_1838 PF01872 RibD C-terminal domain Tmari_1839 PF00990 Diguanylate cyclase, GGDEF domain Tmari_1839 PF08448 PAS fold Tmari_1842 PF00672 HAMP domain Tmari_1842 PF00211 Adenylate and Guanylate cyclase catalytic domain Tmari_1842 PF02743 Cache domain Tmari_1843 PF02056 Family 4 glycosyl hydrolase Tmari_1843 PF11975 Family 4 glycosyl hydrolase C-terminal domain Tmari_1844 PF00128 Alpha amylase, catalytic domain Tmari_1845 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1846 PF14785 Maltose transport system permease protein MalF P2 domain Tmari_1846 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1847 PF01547 Bacterial extracellular solute-binding protein Tmari_1848 PF00128 Alpha amylase, catalytic domain Tmari_1853 PF03714 Bacterial pullanase-associated domain Tmari_1853 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Tmari_1853 PF00128 Alpha amylase, catalytic domain Tmari_1855 PF01325 Iron dependent repressor, N-terminal DNA binding domain Tmari_1855 PF00480 ROK family Tmari_1856 PF00005 ABC transporter Tmari_1857 PF02653 Branched-chain amino acid transport system / permease component Tmari_1858 PF13407 Periplasmic binding protein domain Tmari_1859 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1860 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1861 PF01547 Bacterial extracellular solute-binding protein Tmari_1862 PF00232 Glycosyl hydrolase family 1 Tmari_1863 PF06165 Glycosyltransferase family 36 Tmari_1863 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Tmari_1868 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1869 PF00528 Binding-protein-dependent transport system inner membrane component Tmari_1871 PF00356 Bacterial regulatory proteins, lacI family Tmari_1872 PF01966 HD domain Tmari_1872 PF00013 KH domain Tmari_1872 PF12072 Domain of unknown function (DUF3552) Tmari_1873 PF02631 RecX family Tmari_1874 PF00154 recA bacterial DNA recombination protein Tmari_1876 PF01066 CDP-alcohol phosphatidyltransferase Tmari_1877 PF00919 Uncharacterized protein family UPF0004 Tmari_1877 PF04055 Radical SAM superfamily Tmari_1877 PF18693 TRAM domain Tmari_1880 PF04493 Endonuclease V Tmari_1882 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Tmari_1882 PF00056 lactate/malate dehydrogenase, NAD binding domain Tmari_1883 PF02361 Cobalt transport protein Tmari_1884 PF05362 Lon protease (S16) C-terminal proteolytic domain Tmari_1884 PF13654 AAA domain Tmari_1885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Tmari_1887 PF01894 Uncharacterised protein family UPF0047 Tmari_1888 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Tmari_1888 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Tmari_1889 PF00313 'Cold-shock' DNA-binding domain Tmari_1890 PF00749 tRNA synthetases class I (E and Q), catalytic domain Tmari_1891 PF12850 Calcineurin-like phosphoesterase superfamily domain Tmari_1893 PF02872 5'-nucleotidase, C-terminal domain Tmari_1893 PF00149 Calcineurin-like phosphoesterase