TM_0006 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain TM_0007 SM00460 Transglutaminase/protease-like homologues TM_0010 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TM_0013 SM00849 Metallo-beta-lactamase superfamily TM_0014 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_0022 SM00853 MutL C terminal dimerisation domain TM_0022 SM01340 TM_0022 TM_0023 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_0023 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TM_0025 SM01217 TM_0025 TM_0027 SM00382 ATPases associated with a variety of cellular activities TM_0028 SM00382 ATPases associated with a variety of cellular activities TM_0036 SM00382 ATPases associated with a variety of cellular activities TM_0037 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_0043 SM00382 ATPases associated with a variety of cellular activities TM_0048 SM01321 TM_0048 TM_0050 SM00899 TM_0050 TM_0057 SM00382 ATPases associated with a variety of cellular activities TM_0058 SM00382 ATPases associated with a variety of cellular activities TM_0061 SM00633 Glycosyl hydrolase family 10 TM_0065 SM00346 helix_turn_helix isocitrate lyase regulation TM_0070 SM00633 Glycosyl hydrolase family 10 TM_0074 SM00382 ATPases associated with a variety of cellular activities TM_0075 SM00382 ATPases associated with a variety of cellular activities TM_0076 SM01217 TM_0076 TM_0078 SM00382 ATPases associated with a variety of cellular activities TM_0100 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TM_0100 SM00292 breast cancer carboxy-terminal domain TM_0100 SM00532 Ligase N family TM_0103 SM00382 ATPases associated with a variety of cellular activities TM_0110 SM00419 helix_turn_helix, cAMP Regulatory protein TM_0115 SM00382 ATPases associated with a variety of cellular activities TM_0117 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0124 SM00382 ATPases associated with a variety of cellular activities TM_0126 SM00448 cheY-homologous receiver domain TM_0126 SM00862 Transcriptional regulatory protein, C terminal TM_0127 SM00387 Histidine kinase-like ATPases TM_0143 SM00267 diguanylate cyclase TM_0143 SM00448 cheY-homologous receiver domain TM_0144 SM00834 Putative regulatory protein TM_0146 SM00382 ATPases associated with a variety of cellular activities TM_0146 SM00994 ClpX C4-type zinc finger TM_0146 SM01086 C-terminal, D2-small domain, of ClpB protein TM_0155 SM00830 Chorismate mutase type II TM_0156 SM00098 Alkaline phosphatase homologues TM_0157 SM00903 Flavin reductase like domain TM_0165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TM_0169 SM00881 CoA binding domain TM_0172 SM00996 S-adenosyl-L-homocysteine hydrolase TM_0172 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain TM_0173 SM00382 ATPases associated with a variety of cellular activities TM_0173 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TM_0173 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TM_0173 SM00487 DEAD-like helicases superfamily TM_0173 SM00493 TM_0173 TM_0178 SM00487 DEAD-like helicases superfamily TM_0178 SM00490 helicase superfamily c-terminal domain TM_0182 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0186 SM00448 cheY-homologous receiver domain TM_0186 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_0187 SM00387 Histidine kinase-like ATPases TM_0191 SM00382 ATPases associated with a variety of cellular activities TM_0194 SM00382 ATPases associated with a variety of cellular activities TM_0198 SM00382 ATPases associated with a variety of cellular activities TM_0198 SM01086 C-terminal, D2-small domain, of ClpB protein TM_0199 SM00382 ATPases associated with a variety of cellular activities TM_0201 SM00902 Iron hydrogenase small subunit TM_0201 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TM_0204 SM00382 ATPases associated with a variety of cellular activities TM_0205 SM00487 DEAD-like helicases superfamily TM_0205 SM00490 helicase superfamily c-terminal domain TM_0218 SM00382 ATPases associated with a variety of cellular activities TM_0222 SM00382 ATPases associated with a variety of cellular activities TM_0223 SM00363 S4 RNA-binding domain TM_0228 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TM_0243 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0246 SM00900 TM_0246 TM_0258 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain TM_0258 SM00437 Bacterial DNA topoisomerase I DNA-binding domain TM_0258 SM00493 TM_0258 TM_0262 SM00480 DNA polymerase III beta subunit TM_0263 SM01228 TM_0263 TM_0264 SM00363 S4 RNA-binding domain TM_0265 SM00465 GIY-YIG type nucleases (URI domain) TM_0266 SM00411 bacterial (prokaryotic) histone like domain TM_0268 SM01018 B12 binding domain TM_0275 SM00345 helix_turn_helix gluconate operon transcriptional repressor TM_0281 SM00813 Alpha-L-arabinofuranosidase C-terminus TM_0283 SM01007 Class II Aldolase and Adducin N-terminal domain TM_0287 SM00382 ATPases associated with a variety of cellular activities TM_0288 SM00382 ATPases associated with a variety of cellular activities TM_0294 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase TM_0299 SM00354 helix_turn _helix lactose operon repressor TM_0303 SM00382 ATPases associated with a variety of cellular activities TM_0304 SM00382 ATPases associated with a variety of cellular activities TM_0306 SM00812 Alpha-L-fucosidase TM_0314 SM00746 metallochaperone-like domain TM_0332 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family TM_0337 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0352 SM00382 ATPases associated with a variety of cellular activities TM_0358 SM00046 Diacylglycerol kinase catalytic domain (presumed) TM_0362 SM00518 AP endonuclease family 2 TM_0364 SM00642 Alpha-amylase domain TM_0366 SM00478 endonuclease III TM_0366 SM00525 TM_0366 TM_0382 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TM_0382 SM00478 endonuclease III TM_0389 SM00382 ATPases associated with a variety of cellular activities TM_0399 SM00448 cheY-homologous receiver domain TM_0399 SM00862 Transcriptional regulatory protein, C terminal TM_0400 SM00387 Histidine kinase-like ATPases TM_0400 SM00388 His Kinase A (phosphoacceptor) domain TM_0403 SM00938 Nitrogen regulatory protein P-II TM_0408 SM00448 cheY-homologous receiver domain TM_0409 SM00257 Lysin motif TM_0412 SM00829 Enoylreductase TM_0421 SM00382 ATPases associated with a variety of cellular activities TM_0429 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_0429 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TM_0433 SM00656 TM_0433 TM_0436 SM00829 Enoylreductase TM_0438 SM01350 TM_0438 TM_0439 SM00345 helix_turn_helix gluconate operon transcriptional repressor TM_0439 SM00895 TM_0439 TM_0441 SM00822 TM_0441 TM_0446 SM01001 AIR carboxylase TM_0453 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. TM_0453 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TM_0454 SM00649 Ribosomal protein L11/L12 TM_0459 SM00663 RNA polymerase I subunit A N-terminus TM_0461 SM00481 DNA polymerase alpha chain like domain TM_0462 SM00363 S4 RNA-binding domain TM_0464 SM00138 Methyltransferase, chemotaxis proteins TM_0467 SM00331 Sigma factor PP2C-like phosphatases TM_0468 SM00448 cheY-homologous receiver domain TM_0478 SM00363 S4 RNA-binding domain TM_0480 SM00382 ATPases associated with a variety of cellular activities TM_0483 SM00382 ATPases associated with a variety of cellular activities TM_0495 SM00670 Large family of predicted nucleotide-binding domains TM_0496 SM00479 TM_0496 TM_0498 SM00382 ATPases associated with a variety of cellular activities TM_0500 SM00382 ATPases associated with a variety of cellular activities TM_0501 SM00382 ATPases associated with a variety of cellular activities TM_0505 SM00883 Chaperonin 10 Kd subunit TM_0508 SM00382 ATPases associated with a variety of cellular activities TM_0508 SM00506 Appr-1"-p processing enzyme TM_0510 SM00529 Helix-turn-helix diphteria tox regulatory element TM_0511 SM00986 Uracil DNA glycosylase superfamily TM_0511 SM00987 UreE urease accessory protein, C-terminal domain TM_0513 SM00382 ATPases associated with a variety of cellular activities TM_0515 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0519 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TM_0522 SM00382 ATPases associated with a variety of cellular activities TM_0522 SM01086 C-terminal, D2-small domain, of ClpB protein TM_0530 SM00382 ATPases associated with a variety of cellular activities TM_0542 SM00919 Malic enzyme, NAD binding domain TM_0542 SM01274 TM_0542 TM_0544 SM00382 ATPases associated with a variety of cellular activities TM_0552 SM00917 LeuA allosteric (dimerisation) domain TM_0553 SM00917 LeuA allosteric (dimerisation) domain TM_0556 SM01329 TM_0556 TM_0557 SM00851 MGS-like domain TM_0557 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain TM_0558 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain TM_0559 SM00481 DNA polymerase alpha chain like domain TM_0564 SM00903 Flavin reductase like domain TM_0568 SM00257 Lysin motif TM_0570 SM00382 ATPases associated with a variety of cellular activities TM_0570 SM00962 SRP54-type protein, GTPase domain TM_0570 SM00963 SRP54-type protein, helical bundle domain TM_0571 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TM_0576 SM00479 TM_0576 TM_0576 SM00481 DNA polymerase alpha chain like domain TM_0579 SM00977 TilS substrate C-terminal domain TM_0580 SM00382 ATPases associated with a variety of cellular activities TM_0582 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0583 SM00984 UDP binding domain TM_0587 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_0587 SM01131 TM_0587 TM_0591 SM00382 ATPases associated with a variety of cellular activities TM_0593 SM00062 Bacterial periplasmic substrate-binding proteins TM_0593 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. TM_0599 SM00481 DNA polymerase alpha chain like domain TM_0602 SM00529 Helix-turn-helix diphteria tox regulatory element TM_0607 SM00849 Metallo-beta-lactamase superfamily TM_0612 SM00320 WD40 repeats TM_0613 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain TM_0616 SM00382 ATPases associated with a variety of cellular activities TM_0618 SM00382 ATPases associated with a variety of cellular activities TM_0633 SM00047 Lysozyme subfamily 2 TM_0643 SM00634 Bacterial Ig-like domain (group 1) TM_0652 SM00155 Phospholipase D. Active site motifs. TM_0653 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0656 SM00530 Helix-turn-helix XRE-family like proteins TM_0664 SM00465 GIY-YIG type nucleases (URI domain) TM_0681 SM00849 Metallo-beta-lactamase superfamily TM_0686 SM00382 ATPases associated with a variety of cellular activities TM_0688 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain TM_0700 SM00448 cheY-homologous receiver domain TM_0701 SM00260 Two component signalling adaptor domain TM_0702 SM00073 Histidine Phosphotransfer domain TM_0702 SM00260 Two component signalling adaptor domain TM_0702 SM00387 Histidine kinase-like ATPases TM_0702 SM01231 TM_0702 TM_0703 SM00852 Probable molybdopterin binding domain TM_0705 SM00382 ATPases associated with a variety of cellular activities TM_0710 SM00347 helix_turn_helix multiple antibiotic resistance protein TM_0715 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_0718 SM00260 Two component signalling adaptor domain TM_0719 SM00840 TM_0719 TM_0722 SM00316 Ribosomal protein S1-like RNA-binding domain TM_0722 SM00357 Cold shock protein domain TM_0722 SM00955 TM_0722 TM_0729 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_0729 SM00954 Region found in RelA / SpoT proteins TM_0739 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_0740 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TM_0747 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TM_0747 SM00245 tail specific protease TM_0749 SM00909 Sporulation and spore germination TM_0751 SM00382 ATPases associated with a variety of cellular activities TM_0755 SM00849 Metallo-beta-lactamase superfamily TM_0756 SM00028 Tetratricopeptide repeats TM_0757 SM00028 Tetratricopeptide repeats TM_0765 SM00382 ATPases associated with a variety of cellular activities TM_0766 SM00345 helix_turn_helix gluconate operon transcriptional repressor TM_0767 SM00642 Alpha-amylase domain TM_0770 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0777 SM01321 TM_0777 TM_0793 SM00382 ATPases associated with a variety of cellular activities TM_0798 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. TM_0802 SM00825 Beta-ketoacyl synthase TM_0804 SM00481 DNA polymerase alpha chain like domain TM_0816 SM00347 helix_turn_helix multiple antibiotic resistance protein TM_0822 SM00873 B3/4 domain TM_0822 SM00874 tRNA synthetase B5 domain TM_0822 SM00896 Ferredoxin-fold anticodon binding domain TM_0824 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0825 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0829 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_0830 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0833 SM00387 Histidine kinase-like ATPases TM_0833 SM00433 TopoisomeraseII TM_0835 SM00842 Cell division protein FtsA TM_0836 SM00864 Tubulin/FtsZ family, GTPase domain TM_0836 SM00865 Tubulin/FtsZ family, C-terminal domain TM_0837 SM00382 ATPases associated with a variety of cellular activities TM_0842 SM00448 cheY-homologous receiver domain TM_0843 SM01221 TM_0843 TM_0843 SM01222 TM_0843 TM_0845 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_0845 SM01091 Transporter associated domain TM_0849 SM00271 DnaJ molecular chaperone homology domain TM_0853 SM00387 Histidine kinase-like ATPases TM_0853 SM00388 His Kinase A (phosphoacceptor) domain TM_0854 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_0857 SM00904 Riboflavin kinase TM_0859 SM01323 TM_0859 TM_0866 SM00244 prohibitin homologues TM_0870 SM00740 TM_0870 TM_0877 SM01192 TM_0877 TM_0877 SM01193 TM_0877 TM_0884 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_0890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. TM_0892 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_0894 SM00849 Metallo-beta-lactamase superfamily TM_0907 SM00382 ATPases associated with a variety of cellular activities TM_0907 SM00962 SRP54-type protein, GTPase domain TM_0918 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_0918 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TM_0923 SM00028 Tetratricopeptide repeats TM_0926 SM00382 ATPases associated with a variety of cellular activities TM_0926 SM00760 Bacterial dnaA protein helix-turn-helix domain TM_0930 SM00382 ATPases associated with a variety of cellular activities TM_0935 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_0940 SM00363 S4 RNA-binding domain TM_0943 SM01230 TM_0943 TM_0949 SM00354 helix_turn _helix lactose operon repressor TM_0953 SM00861 Transketolase, pyrimidine binding domain TM_0956 SM00382 ATPases associated with a variety of cellular activities TM_0965 SM01001 AIR carboxylase TM_0972 SM00267 diguanylate cyclase TM_0978 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TM_0984 SM01359 TM_0984 TM_0984 SM01360 TM_0984 TM_0990 SM00487 DEAD-like helicases superfamily TM_0990 SM00490 helicase superfamily c-terminal domain TM_0998 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TM_1005 SM00342 helix_turn_helix, arabinose operon control protein TM_1015 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TM_1028 SM00382 ATPases associated with a variety of cellular activities TM_1052 SM00278 Helix-hairpin-helix DNA-binding motif class 1 TM_1053 SM00935 Outer membrane protein (OmpH-like) TM_1054 SM00382 ATPases associated with a variety of cellular activities TM_1063 SM00382 ATPases associated with a variety of cellular activities TM_1064 SM00382 ATPases associated with a variety of cellular activities TM_1069 SM00420 helix_turn_helix, Deoxyribose operon repressor TM_1069 SM01134 TM_1069 TM_1072 SM01007 Class II Aldolase and Adducin N-terminal domain TM_1084 SM00434 DNA Topoisomerase IV TM_1093 SM00836 DALR anticodon binding domain TM_1093 SM01016 Arginyl tRNA synthetase N terminal dom TM_1095 SM00998 Adenylosuccinate lyase C-terminus TM_1096 SM00788 Adenylosuccinate synthetase TM_1102 SM00358 Double-stranded RNA binding motif TM_1102 SM00535 Ribonuclease III family TM_1103 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1119 SM01043 Bacterial transcriptional activator domain TM_1138 SM00382 ATPases associated with a variety of cellular activities TM_1139 SM00382 ATPases associated with a variety of cellular activities TM_1140 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_1143 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_1145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1146 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_1146 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TM_1147 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1148 SM01329 TM_1148 TM_1151 SM00382 ATPases associated with a variety of cellular activities TM_1152 SM00382 ATPases associated with a variety of cellular activities TM_1161 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_1161 SM00924 MgtE intracellular N domain TM_1162 SM00849 Metallo-beta-lactamase superfamily TM_1163 SM00267 diguanylate cyclase TM_1166 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1170 SM00062 Bacterial periplasmic substrate-binding proteins TM_1170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1171 SM00419 helix_turn_helix, cAMP Regulatory protein TM_1176 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor TM_1182 SM00968 SMC proteins Flexible Hinge Domain TM_1184 SM00091 PAS domain TM_1184 SM00267 diguanylate cyclase TM_1185 SM00851 MGS-like domain TM_1186 SM00834 Putative regulatory protein TM_1193 SM01038 Beta galactosidase small chain TM_1194 SM00382 ATPases associated with a variety of cellular activities TM_1196 SM00382 ATPases associated with a variety of cellular activities TM_1200 SM00354 helix_turn _helix lactose operon repressor TM_1204 SM00948 Proteasome subunit A N-terminal signature Add an annotation TM_1218 SM00354 helix_turn _helix lactose operon repressor TM_1219 SM00382 ATPases associated with a variety of cellular activities TM_1220 SM00382 ATPases associated with a variety of cellular activities TM_1232 SM00382 ATPases associated with a variety of cellular activities TM_1245 SM01211 TM_1245 TM_1249 SM00798 AICARFT/IMPCHase bienzyme TM_1249 SM00851 MGS-like domain TM_1250 SM01209 TM_1250 TM_1250 SM01210 TM_1250 TM_1256 SM00382 ATPases associated with a variety of cellular activities TM_1258 SM00387 Histidine kinase-like ATPases TM_1258 SM00388 His Kinase A (phosphoacceptor) domain TM_1259 SM00448 cheY-homologous receiver domain TM_1259 SM00862 Transcriptional regulatory protein, C terminal TM_1261 SM00382 ATPases associated with a variety of cellular activities TM_1265 SM00382 ATPases associated with a variety of cellular activities TM_1267 SM00876 Biotin and Thiamin Synthesis associated domain TM_1269 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1269 SM00876 Biotin and Thiamin Synthesis associated domain TM_1273 SM00845 GatB domain TM_1276 SM00382 ATPases associated with a variety of cellular activities TM_1277 SM00842 Cell division protein FtsA TM_1278 SM00463 Small MutS-related domain TM_1278 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TM_1278 SM00534 ATPase domain of DNA mismatch repair MUTS family TM_1283 SM01207 TM_1283 TM_1295 SM00849 Metallo-beta-lactamase superfamily TM_1302 SM00382 ATPases associated with a variety of cellular activities TM_1310 SM00382 ATPases associated with a variety of cellular activities TM_1314 SM00530 Helix-turn-helix XRE-family like proteins TM_1319 SM00382 ATPases associated with a variety of cellular activities TM_1324 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1325 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1327 SM00382 ATPases associated with a variety of cellular activities TM_1328 SM00382 ATPases associated with a variety of cellular activities TM_1330 SM00530 Helix-turn-helix XRE-family like proteins TM_1334 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1344 SM01387 TM_1344 TM_1345 SM00316 Ribosomal protein S1-like RNA-binding domain TM_1345 SM00322 K homology RNA-binding domain TM_1347 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_1347 SM01240 TM_1347 TM_1352 SM00481 DNA polymerase alpha chain like domain TM_1354 SM00116 Domain in cystathionine beta-synthase and other proteins. TM_1359 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. TM_1359 SM00091 PAS domain TM_1359 SM00387 Histidine kinase-like ATPases TM_1359 SM00388 His Kinase A (phosphoacceptor) domain TM_1360 SM00448 cheY-homologous receiver domain TM_1362 SM00382 ATPases associated with a variety of cellular activities TM_1363 SM00937 TM_1363 TM_1368 SM00382 ATPases associated with a variety of cellular activities TM_1374 SM00855 Phosphoglycerate mutase family TM_1376 SM00382 ATPases associated with a variety of cellular activities TM_1391 SM00382 ATPases associated with a variety of cellular activities TM_1391 SM01086 C-terminal, D2-small domain, of ClpB protein TM_1396 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TM_1403 SM00382 ATPases associated with a variety of cellular activities TM_1414 SM00640 Glycosyl hydrolases family 32 TM_1417 SM00382 ATPases associated with a variety of cellular activities TM_1425 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region TM_1426 SM00902 Iron hydrogenase small subunit TM_1426 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region TM_1427 SM00881 CoA binding domain TM_1428 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). TM_1428 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain TM_1428 SM01049 TM_1428 TM_1435 SM00881 CoA binding domain TM_1437 SM00650 Ribosomal RNA adenine dimethylases TM_1447 SM01207 TM_1447 TM_1449 SM00028 Tetratricopeptide repeats TM_1450 SM00487 DEAD-like helicases superfamily TM_1450 SM00490 helicase superfamily c-terminal domain TM_1450 SM00982 TM_1450 TM_1450 SM01058 CarD-like/TRCF domain TM_1452 SM00400 zinc finger TM_1452 SM00493 TM_1452 TM_1460 SM00393 Putative single-stranded nucleic acids-binding domain TM_1460 SM01245 TM_1460 TM_1462 SM01234 TM_1462 TM_1467 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1470 SM00357 Cold shock protein domain TM_1470 SM00382 ATPases associated with a variety of cellular activities TM_1470 SM00959 Rho termination factor, N-terminal domain TM_1472 SM00662 RNA polymerases D TM_1473 SM00363 S4 RNA-binding domain TM_1473 SM01390 TM_1473 TM_1489 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. TM_1490 SM01374 TM_1490 TM_1494 SM00322 K homology RNA-binding domain TM_1497 SM01382 TM_1497 TM_1497 SM01383 TM_1497 TM_1501 SM01403 TM_1501 TM_1503 SM00838 Elongation factor G C-terminus TM_1503 SM00889 Elongation factor G, domain IV TM_1508 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1521 SM01130 TM_1521 TM_1523 SM00859 Semialdehyde dehydrogenase, NAD binding domain TM_1530 SM00893 Electron transfer flavoprotein domain TM_1531 SM00893 Electron transfer flavoprotein domain TM_1537 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1541 SM00858 TM_1541 TM_1545 SM00732 Likely ribonuclease with RNase H fold. TM_1547 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1552 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1558 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1559 SM01133 TM_1559 TM_1565 SM00382 ATPases associated with a variety of cellular activities TM_1565 SM00962 SRP54-type protein, GTPase domain TM_1565 SM00963 SRP54-type protein, helical bundle domain TM_1573 SM00564 beta-propeller repeat TM_1576 SM00363 S4 RNA-binding domain TM_1578 SM00957 SecA DEAD-like domain TM_1578 SM00958 SecA preprotein cross-linking domain TM_1579 SM00937 TM_1579 TM_1588 SM00267 diguanylate cyclase TM_1594 SM00267 diguanylate cyclase TM_1601 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1606 SM00316 Ribosomal protein S1-like RNA-binding domain TM_1610 SM00382 ATPases associated with a variety of cellular activities TM_1619 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs TM_1619 SM00474 3'-5' exonuclease TM_1619 SM00475 5'-3' exonuclease TM_1619 SM00482 DNA polymerase A domain TM_1628 SM01400 TM_1628 TM_1633 SM00382 ATPases associated with a variety of cellular activities TM_1633 SM00464 Found in ATP-dependent protease La (LON) TM_1638 SM00382 ATPases associated with a variety of cellular activities TM_1648 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1650 SM00642 Alpha-amylase domain TM_1651 SM00838 Elongation factor G C-terminus TM_1651 SM00889 Elongation factor G, domain IV TM_1653 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain TM_1654 SM00091 PAS domain TM_1654 SM00387 Histidine kinase-like ATPases TM_1654 SM00388 His Kinase A (phosphoacceptor) domain TM_1655 SM00448 cheY-homologous receiver domain TM_1655 SM00862 Transcriptional regulatory protein, C terminal TM_1663 SM00382 ATPases associated with a variety of cellular activities TM_1665 SM00387 Histidine kinase-like ATPases TM_1679 SM00849 Metallo-beta-lactamase superfamily TM_1682 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1683 SM00357 Cold shock protein domain TM_1685 SM00316 Ribosomal protein S1-like RNA-binding domain TM_1686 SM00257 Lysin motif TM_1688 SM01409 TM_1688 TM_1689 SM00072 Guanylate kinase homologues. TM_1689 SM00382 ATPases associated with a variety of cellular activities TM_1693 SM00563 Phosphate acyltransferases TM_1694 SM00981 TM_1694 TM_1695 SM00028 Tetratricopeptide repeats TM_1699 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1715 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1716 SM00740 TM_1716 TM_1719 SM00533 DNA-binding domain of DNA mismatch repair MUTS family TM_1719 SM00534 ATPase domain of DNA mismatch repair MUTS family TM_1724 SM00822 TM_1724 TM_1726 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain TM_1730 SM00382 ATPases associated with a variety of cellular activities TM_1736 SM00382 ATPases associated with a variety of cellular activities TM_1739 SM00933 TM_1739 TM_1740 SM00535 Ribonuclease III family TM_1741 SM00967 RNA 2'-O ribose methyltransferase substrate binding TM_1749 SM00382 ATPases associated with a variety of cellular activities TM_1750 SM00382 ATPases associated with a variety of cellular activities TM_1761 SM00487 DEAD-like helicases superfamily TM_1761 SM00490 helicase superfamily c-terminal domain TM_1762 SM00861 Transketolase, pyrimidine binding domain TM_1763 SM00841 Elongation factor P, C-terminal TM_1763 SM01185 TM_1763 TM_1770 SM00861 Transketolase, pyrimidine binding domain TM_1772 SM01120 TM_1772 TM_1772 SM01121 TM_1772 TM_1773 SM00028 Tetratricopeptide repeats TM_1777 SM00316 Ribosomal protein S1-like RNA-binding domain TM_1782 SM00859 Semialdehyde dehydrogenase, NAD binding domain TM_1788 SM00267 diguanylate cyclase TM_1799 SM00487 DEAD-like helicases superfamily TM_1803 SM00271 DnaJ molecular chaperone homology domain TM_1821 SM00478 endonuclease III TM_1822 SM00244 prohibitin homologues TM_1823 SM00244 prohibitin homologues TM_1830 SM00267 diguanylate cyclase TM_1832 SM01321 TM_1832 TM_1835 SM00642 Alpha-amylase domain TM_1839 SM00948 Proteasome subunit A N-terminal signature Add an annotation TM_1840 SM00642 Alpha-amylase domain TM_1844 SM01065 Starch binding domain TM_1845 SM00642 Alpha-amylase domain TM_1846 SM00320 WD40 repeats TM_1848 SM01068 Putative carbohydrate binding domain TM_1851 SM00872 Alpha mannosidase, middle domain TM_1856 SM00354 helix_turn _helix lactose operon repressor TM_1857 SM00322 K homology RNA-binding domain TM_1857 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. TM_1859 SM00382 ATPases associated with a variety of cellular activities TM_1862 SM00729 Elongator protein 3, MiaB family, Radical SAM TM_1874 SM00357 Cold shock protein domain