Theam_0001 PF00425 chorismate binding enzyme Theam_0001 PF04715 Anthranilate synthase component I, N terminal region Theam_0002 PF00772 DnaB-like helicase N terminal domain Theam_0002 PF03796 DnaB-like helicase C terminal domain Theam_0003 PF12705 PD-(D/E)XK nuclease superfamily Theam_0004 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theam_0004 PF03129 Anticodon binding domain Theam_0004 PF04073 Aminoacyl-tRNA editing domain Theam_0005 PF00534 Glycosyl transferases group 1 Theam_0005 PF13439 Glycosyltransferase Family 4 Theam_0006 PF00308 Bacterial dnaA protein Theam_0006 PF08299 Bacterial dnaA protein helix-turn-helix Theam_0007 PF00712 DNA polymerase III beta subunit, N-terminal domain Theam_0007 PF02767 DNA polymerase III beta subunit, central domain Theam_0007 PF02768 DNA polymerase III beta subunit, C-terminal domain Theam_0008 PF01066 CDP-alcohol phosphatidyltransferase Theam_0009 PF02660 Theam_0009 Theam_0010 PF00348 Polyprenyl synthetase Theam_0011 PF02779 Transketolase, pyrimidine binding domain Theam_0011 PF02780 Transketolase, C-terminal domain Theam_0011 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Theam_0014 PF08861 Theam_0014 Theam_0014 PF08862 Theam_0014 Theam_0015 PF13550 Theam_0015 Theam_0016 PF00877 NlpC/P60 family Theam_0020 PF05133 Phage portal protein, SPP1 Gp6-like Theam_0025 PF17236 Theam_0025 Theam_0027 PF12728 Helix-turn-helix domain Theam_0031 PF13401 AAA domain Theam_0032 PF00665 Integrase core domain Theam_0032 PF13384 Homeodomain-like domain Theam_0033 PF02195 ParB-like nuclease domain Theam_0038 PF00216 Bacterial DNA-binding protein Theam_0048 PF00717 Peptidase S24-like Theam_0048 PF12844 Helix-turn-helix domain Theam_0052 PF01464 Transglycosylase SLT domain Theam_0054 PF01870 Archaeal holliday junction resolvase (hjc) Theam_0057 PF11985 Theam_0057 Theam_0058 PF03237 Terminase-like family Theam_0058 PF17289 Theam_0058 Theam_0060 PF10145 Theam_0060 Theam_0064 PF05708 Orthopoxvirus protein of unknown function (DUF830) Theam_0065 PF00873 AcrB/AcrD/AcrF family Theam_0066 PF16576 Theam_0066 Theam_0067 PF02321 Outer membrane efflux protein Theam_0068 PF01925 Theam_0068 Theam_0070 PF01022 Bacterial regulatory protein, arsR family Theam_0071 PF00484 Carbonic anhydrase Theam_0072 PF09002 Domain of unknown function (DUF1887) Theam_0073 PF01048 Phosphorylase superfamily Theam_0075 PF00977 Histidine biosynthesis protein Theam_0076 PF01964 ThiC family Theam_0077 PF01946 Thi4 family Theam_0079 PF01546 Peptidase family M20/M25/M40 Theam_0079 PF07687 Peptidase dimerisation domain Theam_0080 PF00156 Phosphoribosyl transferase domain Theam_0081 PF00348 Polyprenyl synthetase Theam_0082 PF08780 Nucleotidyltransferase substrate binding protein like Theam_0083 PF01909 Nucleotidyltransferase domain Theam_0084 PF16363 Theam_0084 Theam_0085 PF02463 RecF/RecN/SMC N terminal domain Theam_0085 PF06470 SMC proteins Flexible Hinge Domain Theam_0087 PF12838 4Fe-4S dicluster domain Theam_0088 PF01765 Ribosome recycling factor Theam_0089 PF00696 Amino acid kinase family Theam_0090 PF00889 Elongation factor TS Theam_0091 PF00318 Ribosomal protein S2 Theam_0092 PF02538 Theam_0092 Theam_0093 PF01968 Hydantoinase/oxoprolinase Theam_0093 PF05378 Theam_0093 Theam_0094 PF01209 ubiE/COQ5 methyltransferase family Theam_0095 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) Theam_0096 PF01925 Theam_0096 Theam_0097 PF03091 CutA1 divalent ion tolerance protein Theam_0098 PF01261 Xylose isomerase-like TIM barrel Theam_0099 PF00156 Phosphoribosyl transferase domain Theam_0100 PF06133 Protein of unknown function (DUF964) Theam_0104 PF00753 Metallo-beta-lactamase superfamily Theam_0105 PF03259 Roadblock/LC7 domain Theam_0106 PF00591 Glycosyl transferase family, a/b domain Theam_0106 PF02885 Glycosyl transferase family, helical bundle domain Theam_0106 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Theam_0107 PF02163 Peptidase family M50 Theam_0108 PF01871 AMMECR1 Theam_0109 PF02537 Theam_0109 Theam_0110 PF03477 ATP cone domain Theam_0111 PF02618 YceG-like family Theam_0112 PF01066 CDP-alcohol phosphatidyltransferase Theam_0113 PF00025 ADP-ribosylation factor family Theam_0116 PF03259 Roadblock/LC7 domain Theam_0119 PF04055 Radical SAM superfamily Theam_0119 PF16199 Theam_0119 Theam_0120 PF02590 Predicted SPOUT methyltransferase Theam_0121 PF02410 Oligomerisation domain Theam_0122 PF13174 Tetratricopeptide repeat Theam_0122 PF13525 Outer membrane lipoprotein Theam_0123 PF10150 Ribonuclease E/G family Theam_0124 PF04055 Radical SAM superfamily Theam_0124 PF10105 Theam_0124 Theam_0126 PF04338 Protein of unknown function, DUF481 Theam_0127 PF00717 Peptidase S24-like Theam_0127 PF10502 Signal peptidase, peptidase S26 Theam_0129 PF00216 Bacterial DNA-binding protein Theam_0130 PF05103 DivIVA protein Theam_0131 PF02325 Theam_0131 Theam_0132 PF01725 Ham1 family Theam_0133 PF01138 3' exoribonuclease family, domain 1 Theam_0133 PF03725 3' exoribonuclease family, domain 2 Theam_0134 PF01177 Asp/Glu/Hydantoin racemase Theam_0135 PF02824 TGS domain Theam_0135 PF04607 Region found in RelA / SpoT proteins Theam_0135 PF13291 ACT domain Theam_0135 PF13328 HD domain Theam_0136 PF00574 Clp protease Theam_0137 PF00925 GTP cyclohydrolase II Theam_0137 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Theam_0139 PF00563 EAL domain Theam_0140 PF01488 Shikimate / quinate 5-dehydrogenase Theam_0140 PF08501 Shikimate dehydrogenase substrate binding domain Theam_0141 PF02308 Theam_0141 Theam_0141 PF13194 Theam_0141 Theam_0142 PF01016 Ribosomal L27 protein Theam_0143 PF00829 Ribosomal prokaryotic L21 protein Theam_0144 PF14279 Theam_0144 Theam_0145 PF00478 IMP dehydrogenase / GMP reductase domain Theam_0145 PF00571 CBS domain Theam_0146 PF00206 Lyase Theam_0146 PF14698 Argininosuccinate lyase C-terminal Theam_0147 PF00456 Transketolase, thiamine diphosphate binding domain Theam_0148 PF02779 Transketolase, pyrimidine binding domain Theam_0148 PF02780 Transketolase, C-terminal domain Theam_0149 PF03572 Peptidase family S41 Theam_0149 PF13180 PDZ domain Theam_0150 PF12697 Alpha/beta hydrolase family Theam_0151 PF03668 Theam_0151 Theam_0153 PF01513 ATP-NAD kinase Theam_0154 PF01695 IstB-like ATP binding protein Theam_0155 PF04055 Radical SAM superfamily Theam_0156 PF07238 PilZ domain Theam_0157 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Theam_0157 PF00672 HAMP domain Theam_0158 PF05958 tRNA (Uracil-5-)-methyltransferase Theam_0159 PF01180 Dihydroorotate dehydrogenase Theam_0160 PF00270 DEAD/DEAH box helicase Theam_0160 PF00271 Helicase conserved C-terminal domain Theam_0160 PF17191 Theam_0160 Theam_0161 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 Theam_0161 PF13181 Tetratricopeptide repeat Theam_0161 PF13432 Tetratricopeptide repeat Theam_0161 PF14559 Tetratricopeptide repeat Theam_0163 PF00883 Cytosol aminopeptidase family, catalytic domain Theam_0163 PF02789 Cytosol aminopeptidase family, N-terminal domain Theam_0164 PF00654 Voltage gated chloride channel Theam_0165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Theam_0165 PF00672 HAMP domain Theam_0165 PF02743 Cache domain Theam_0166 PF00753 Metallo-beta-lactamase superfamily Theam_0166 PF00990 GGDEF domain Theam_0167 PF09511 RNA ligase Theam_0168 PF00977 Histidine biosynthesis protein Theam_0170 PF02445 Quinolinate synthetase A protein Theam_0171 PF00117 Glutamine amidotransferase class-I Theam_0171 PF00958 GMP synthase C terminal domain Theam_0171 PF02540 NAD synthase Theam_0176 PF02578 Multi-copper polyphenol oxidoreductase laccase Theam_0177 PF02481 DNA recombination-mediator protein A Theam_0178 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase Theam_0179 PF00709 Adenylosuccinate synthetase Theam_0180 PF13393 Histidyl-tRNA synthetase Theam_0181 PF00291 Pyridoxal-phosphate dependent enzyme Theam_0182 PF00701 Dihydrodipicolinate synthetase family Theam_0183 PF06146 Theam_0183 Theam_0183 PF11563 Protoglobin Theam_0184 PF01113 Dihydrodipicolinate reductase, N-terminus Theam_0184 PF05173 Dihydrodipicolinate reductase, C-terminus Theam_0185 PF09383 NIL domain Theam_0185 PF12838 4Fe-4S dicluster domain Theam_0186 PF00141 Peroxidase Theam_0187 PF00962 Adenosine/AMP deaminase Theam_0189 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Theam_0190 PF00742 Homoserine dehydrogenase Theam_0190 PF01842 ACT domain Theam_0190 PF03447 Homoserine dehydrogenase, NAD binding domain Theam_0191 PF00155 Aminotransferase class I and II Theam_0192 PF01497 Periplasmic binding protein Theam_0193 PF01032 FecCD transport family Theam_0194 PF00005 ABC transporter Theam_0195 PF00593 TonB dependent receptor Theam_0195 PF07715 TonB-dependent Receptor Plug Domain Theam_0196 PF13460 NADH(P)-binding Theam_0197 PF03328 HpcH/HpaI aldolase/citrate lyase family Theam_0198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Theam_0198 PF03466 LysR substrate binding domain Theam_0200 PF03745 Domain of unknown function (DUF309) Theam_0201 PF00330 Aconitase family (aconitate hydratase) Theam_0203 PF01435 Peptidase family M48 Theam_0204 PF05226 Theam_0204 Theam_0205 PF01467 Cytidylyltransferase Theam_0206 PF00162 Phosphoglycerate kinase Theam_0210 PF01476 LysM domain Theam_0211 PF01134 Glucose inhibited division protein A Theam_0212 PF01467 Cytidylyltransferase Theam_0213 PF01966 HD domain Theam_0214 PF01475 Ferric uptake regulator family Theam_0215 PF00551 Formyl transferase Theam_0215 PF02911 Formyl transferase, C-terminal domain Theam_0216 PF01300 Telomere recombination Theam_0217 PF01937 Protein of unknown function DUF89 Theam_0218 PF00731 AIR carboxylase Theam_0220 PF01132 Elongation factor P (EF-P) OB domain Theam_0220 PF08207 Elongation factor P (EF-P) KOW-like domain Theam_0220 PF09285 Elongation factor P, C-terminal Theam_0221 PF00364 Biotin-requiring enzyme Theam_0222 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Theam_0222 PF02785 Biotin carboxylase C-terminal domain Theam_0222 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Theam_0223 PF17209 Theam_0223 Theam_0224 PF17209 Theam_0224 Theam_0225 PF00486 Transcriptional regulatory protein, C terminal Theam_0226 PF00580 UvrD/REP helicase N-terminal domain Theam_0226 PF13361 UvrD-like helicase C-terminal domain Theam_0227 PF00266 Aminotransferase class-V Theam_0228 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Theam_0229 PF01613 Flavin reductase like domain Theam_0230 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Theam_0231 PF01784 NIF3 (NGG1p interacting factor 3) Theam_0232 PF02591 Putative zinc ribbon domain Theam_0233 PF00004 ATPase family associated with various cellular activities (AAA) Theam_0233 PF02190 ATP-dependent protease La (LON) domain Theam_0233 PF05362 Lon protease (S16) C-terminal proteolytic domain Theam_0234 PF00483 Nucleotidyl transferase Theam_0235 PF10672 S-adenosylmethionine-dependent methyltransferase Theam_0237 PF00117 Glutamine amidotransferase class-I Theam_0237 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Theam_0238 PF01297 Periplasmic solute binding protein family Theam_0239 PF00117 Glutamine amidotransferase class-I Theam_0240 PF02684 Theam_0240 Theam_0241 PF01170 Putative RNA methylase family UPF0020 Theam_0241 PF02926 THUMP domain Theam_0243 PF09620 Theam_0243 Theam_0244 PF01207 Dihydrouridine synthase (Dus) Theam_0245 PF00312 Ribosomal protein S15 Theam_0246 PF00013 KH domain Theam_0246 PF00575 S1 RNA binding domain Theam_0246 PF01138 3' exoribonuclease family, domain 1 Theam_0246 PF03725 3' exoribonuclease family, domain 2 Theam_0246 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Theam_0247 PF00692 dUTPase Theam_0248 PF01694 Rhomboid family Theam_0249 PF00004 ATPase family associated with various cellular activities (AAA) Theam_0250 PF00682 HMGL-like Theam_0250 PF08502 LeuA allosteric (dimerisation) domain Theam_0252 PF00164 Ribosomal protein S12/S23 Theam_0253 PF00177 Ribosomal protein S7p/S5e Theam_0254 PF00009 Elongation factor Tu GTP binding domain Theam_0254 PF00679 Elongation factor G C-terminus Theam_0254 PF03144 Elongation factor Tu domain 2 Theam_0254 PF03764 Elongation factor G, domain IV Theam_0254 PF14492 Elongation Factor G, domain II Theam_0255 PF00009 Elongation factor Tu GTP binding domain Theam_0255 PF03143 Elongation factor Tu C-terminal domain Theam_0255 PF03144 Elongation factor Tu domain 2 Theam_0256 PF00338 Ribosomal protein S10p/S20e Theam_0257 PF00297 Ribosomal protein L3 Theam_0258 PF00573 Ribosomal protein L4/L1 family Theam_0259 PF00276 Ribosomal protein L23 Theam_0260 PF00181 Ribosomal Proteins L2, RNA binding domain Theam_0260 PF03947 Ribosomal Proteins L2, C-terminal domain Theam_0261 PF00203 Ribosomal protein S19 Theam_0262 PF00237 Ribosomal protein L22p/L17e Theam_0263 PF00189 Ribosomal protein S3, C-terminal domain Theam_0263 PF07650 KH domain Theam_0264 PF00252 Ribosomal protein L16p/L10e Theam_0265 PF00831 Ribosomal L29 protein Theam_0266 PF00366 Ribosomal protein S17 Theam_0267 PF00238 Ribosomal protein L14p/L23e Theam_0268 PF00467 KOW motif Theam_0268 PF17136 Theam_0268 Theam_0269 PF00281 Ribosomal protein L5 Theam_0269 PF00673 ribosomal L5P family C-terminus Theam_0270 PF00253 Ribosomal protein S14p/S29e Theam_0271 PF00410 Ribosomal protein S8 Theam_0272 PF00347 Ribosomal protein L6 Theam_0273 PF00861 Ribosomal L18p/L5e family Theam_0274 PF00333 Ribosomal protein S5, N-terminal domain Theam_0274 PF03719 Ribosomal protein S5, C-terminal domain Theam_0275 PF00327 Ribosomal protein L30p/L7e Theam_0276 PF00828 Ribosomal protein L18e/L15 Theam_0277 PF00344 SecY translocase Theam_0278 PF00406 Adenylate kinase Theam_0279 PF00557 Metallopeptidase family M24 Theam_0280 PF01176 Translation initiation factor 1A / IF-1 Theam_0281 PF00444 Ribosomal protein L36 Theam_0282 PF00416 Ribosomal protein S13/S18 Theam_0283 PF00411 Ribosomal protein S11 Theam_0284 PF00163 Ribosomal protein S4/S9 N-terminal domain Theam_0284 PF01479 S4 domain Theam_0285 PF01000 RNA polymerase Rpb3/RpoA insert domain Theam_0285 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Theam_0285 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Theam_0286 PF01196 Ribosomal protein L17 Theam_0287 PF03776 Septum formation topological specificity factor MinE Theam_0288 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Theam_0289 PF03775 Septum formation inhibitor MinC, C-terminal domain Theam_0290 PF00491 Arginase family Theam_0291 PF01564 Spermine/spermidine synthase Theam_0291 PF17284 Theam_0291 Theam_0292 PF01861 Protein of unknown function DUF43 Theam_0293 PF01758 Sodium Bile acid symporter family Theam_0295 PF01048 Phosphorylase superfamily Theam_0296 PF14489 QueF-like protein Theam_0297 PF01386 Ribosomal L25p family Theam_0297 PF14693 Ribosomal protein TL5, C-terminal domain Theam_0298 PF01195 Peptidyl-tRNA hydrolase Theam_0299 PF01250 Ribosomal protein S6 Theam_0300 PF00436 Single-strand binding protein family Theam_0301 PF01084 Ribosomal protein S18 Theam_0303 PF01281 Ribosomal protein L9, N-terminal domain Theam_0303 PF03948 Ribosomal protein L9, C-terminal domain Theam_0304 PF02675 S-adenosylmethionine decarboxylase Theam_0305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Theam_0306 PF01042 Endoribonuclease L-PSP Theam_0307 PF01022 Bacterial regulatory protein, arsR family Theam_0308 PF01039 Carboxyl transferase domain Theam_0310 PF00270 DEAD/DEAH box helicase Theam_0310 PF00271 Helicase conserved C-terminal domain Theam_0310 PF02559 CarD-like/TRCF domain Theam_0310 PF03461 TRCF domain Theam_0311 PF12796 Ankyrin repeats (3 copies) Theam_0311 PF13857 Ankyrin repeats (many copies) Theam_0312 PF07273 Protein of unknown function (DUF1439) Theam_0314 PF12849 PBP superfamily domain Theam_0316 PF02635 DsrE/DsrF-like family Theam_0317 PF09719 Putative redox-active protein (C_GCAxxG_C_C) Theam_0318 PF01978 Sugar-specific transcriptional regulator TrmB Theam_0319 PF12801 Theam_0319 Theam_0320 PF13488 Theam_0320 Theam_0321 PF04026 SpoVG Theam_0322 PF01954 Protein of unknown function DUF104 Theam_0323 PF00156 Phosphoribosyl transferase domain Theam_0324 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Theam_0325 PF00072 Response regulator receiver domain Theam_0325 PF00486 Transcriptional regulatory protein, C terminal Theam_0327 PF00310 Glutamine amidotransferases class-II Theam_0327 PF01493 GXGXG motif Theam_0327 PF01645 Conserved region in glutamate synthase Theam_0327 PF04898 Glutamate synthase central domain Theam_0328 PF01808 AICARFT/IMPCHase bienzyme Theam_0328 PF02142 MGS-like domain Theam_0329 PF01145 SPFH domain / Band 7 family Theam_0330 PF01957 NfeD-like C-terminal, partner-binding Theam_0331 PF00842 Alanine racemase, C-terminal domain Theam_0331 PF01168 Alanine racemase, N-terminal domain Theam_0332 PF06325 Ribosomal protein L11 methyltransferase (PrmA) Theam_0333 PF02811 PHP domain Theam_0334 PF03235 Theam_0334 Theam_0336 PF00227 Proteasome subunit Theam_0337 PF00004 ATPase family associated with various cellular activities (AAA) Theam_0337 PF07724 AAA domain (Cdc48 subfamily) Theam_0337 PF10431 C-terminal, D2-small domain, of ClpB protein Theam_0338 PF00557 Metallopeptidase family M24 Theam_0338 PF01321 Creatinase/Prolidase N-terminal domain Theam_0341 PF03787 RAMP superfamily Theam_0343 PF03787 RAMP superfamily Theam_0344 PF03787 RAMP superfamily Theam_0345 PF01702 Queuine tRNA-ribosyltransferase Theam_0347 PF00694 Aconitase C-terminal domain Theam_0348 PF00180 Isocitrate/isopropylmalate dehydrogenase Theam_0349 PF01118 Semialdehyde dehydrogenase, NAD binding domain Theam_0349 PF02774 Semialdehyde dehydrogenase, dimerisation domain Theam_0351 PF13483 Beta-lactamase superfamily domain Theam_0352 PF01734 Patatin-like phospholipase Theam_0353 PF00708 Acylphosphatase Theam_0354 PF01476 LysM domain Theam_0354 PF01551 Peptidase family M23 Theam_0355 PF02386 Cation transport protein Theam_0356 PF02080 TrkA-C domain Theam_0356 PF02254 TrkA-N domain Theam_0357 PF01578 Theam_0357 Theam_0358 PF05140 Theam_0358 Theam_0359 PF01979 Amidohydrolase family Theam_0360 PF01743 Poly A polymerase head domain Theam_0360 PF01966 HD domain Theam_0360 PF12627 Probable RNA and SrmB- binding site of polymerase A Theam_0361 PF00005 ABC transporter Theam_0362 PF00004 ATPase family associated with various cellular activities (AAA) Theam_0362 PF02861 Clp amino terminal domain Theam_0362 PF07724 AAA domain (Cdc48 subfamily) Theam_0362 PF10431 C-terminal, D2-small domain, of ClpB protein Theam_0363 PF04452 RNA methyltransferase Theam_0365 PF01661 Macro domain Theam_0366 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Theam_0366 PF00672 HAMP domain Theam_0366 PF08376 Nitrate and nitrite sensing Theam_0367 PF05168 HEPN domain Theam_0369 PF00849 RNA pseudouridylate synthase Theam_0369 PF01479 S4 domain Theam_0370 PF03884 Domain of unknown function (DUF329) Theam_0371 PF00488 MutS domain V Theam_0371 PF01624 MutS domain I Theam_0371 PF05188 MutS domain II Theam_0371 PF05190 MutS family domain IV Theam_0371 PF05192 MutS domain III Theam_0372 PF06195 Theam_0372 Theam_0373 PF00682 HMGL-like Theam_0373 PF08502 LeuA allosteric (dimerisation) domain Theam_0374 PF00696 Amino acid kinase family Theam_0374 PF01842 ACT domain Theam_0374 PF13840 ACT domain Theam_0375 PF00994 Probable molybdopterin binding domain Theam_0375 PF03453 MoeA N-terminal region (domain I and II) Theam_0375 PF03454 MoeA C-terminal region (domain IV) Theam_0376 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 Theam_0376 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain Theam_0377 PF01118 Semialdehyde dehydrogenase, NAD binding domain Theam_0377 PF02774 Semialdehyde dehydrogenase, dimerisation domain Theam_0378 PF00380 Ribosomal protein S9/S16 Theam_0379 PF00572 Ribosomal protein L13 Theam_0381 PF01628 HrcA protein C terminal domain Theam_0382 PF00132 Bacterial transferase hexapeptide (six repeats) Theam_0385 PF00834 Ribulose-phosphate 3 epimerase family Theam_0386 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Theam_0386 PF14572 Phosphoribosyl synthetase-associated domain Theam_0387 PF07963 Prokaryotic N-terminal methylation motif Theam_0388 PF07963 Prokaryotic N-terminal methylation motif Theam_0389 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Theam_0390 PF01648 4'-phosphopantetheinyl transferase superfamily Theam_0391 PF01814 Hemerythrin HHE cation binding domain Theam_0392 PF00550 Phosphopantetheine attachment site Theam_0393 PF13561 Enoyl-(Acyl carrier protein) reductase Theam_0394 PF09622 Theam_0394 Theam_0396 PF00563 EAL domain Theam_0396 PF00990 GGDEF domain Theam_0396 PF08376 Nitrate and nitrite sensing Theam_0397 PF00484 Carbonic anhydrase Theam_0398 PF12850 Calcineurin-like phosphoesterase superfamily domain Theam_0399 PF01131 DNA topoisomerase Theam_0399 PF01396 Theam_0399 Theam_0399 PF01751 Toprim domain Theam_0400 PF05552 Conserved TM helix Theam_0403 PF05866 Endodeoxyribonuclease RusA Theam_0404 PF00890 FAD binding domain Theam_0405 PF04332 Theam_0405 Theam_0406 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Theam_0407 PF00301 Rubredoxin Theam_0409 PF04456 Protein of unknown function (DUF503) Theam_0410 PF00196 Bacterial regulatory proteins, luxR family Theam_0411 PF13177 DNA polymerase III, delta subunit Theam_0412 PF02223 Thymidylate kinase Theam_0413 PF00999 Sodium/hydrogen exchanger family Theam_0414 PF02080 TrkA-C domain Theam_0415 PF11845 Theam_0415 Theam_0416 PF04055 Radical SAM superfamily Theam_0417 PF04468 Theam_0417 Theam_0418 PF13435 Cytochrome c554 and c-prime Theam_0418 PF13447 Seven times multi-haem cytochrome CxxCH Theam_0419 PF13414 TPR repeat Theam_0421 PF03264 NapC/NirT cytochrome c family, N-terminal region Theam_0423 PF00384 Molybdopterin oxidoreductase Theam_0423 PF01568 Molydopterin dinucleotide binding domain Theam_0423 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theam_0424 PF03927 NapD protein Theam_0425 PF12838 4Fe-4S dicluster domain Theam_0426 PF12801 Theam_0426 Theam_0428 PF03309 Type III pantothenate kinase Theam_0429 PF01960 ArgJ family Theam_0431 PF00291 Pyridoxal-phosphate dependent enzyme Theam_0433 PF02511 Thymidylate synthase complementing protein Theam_0434 PF01197 Ribosomal protein L31 Theam_0435 PF09335 Theam_0435 Theam_0436 PF00290 Tryptophan synthase alpha chain Theam_0437 PF02416 mttA/Hcf106 family Theam_0438 PF00902 Sec-independent protein translocase protein (TatC) Theam_0439 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theam_0439 PF07497 Rho termination factor, RNA-binding domain Theam_0439 PF07498 Rho termination factor, N-terminal domain Theam_0440 PF13580 SIS domain Theam_0441 PF01791 DeoC/LacD family aldolase Theam_0442 PF04055 Radical SAM superfamily Theam_0442 PF12836 Helix-hairpin-helix motif Theam_0443 PF00999 Sodium/hydrogen exchanger family Theam_0444 PF02080 TrkA-C domain Theam_0444 PF02254 TrkA-N domain Theam_0445 PF00005 ABC transporter Theam_0446 PF01458 Uncharacterized protein family (UPF0051) Theam_0447 PF01880 Desulfoferrodoxin Theam_0448 PF00677 Lumazine binding domain Theam_0449 PF02541 Ppx/GppA phosphatase family Theam_0450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Theam_0450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Theam_0450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Theam_0451 PF01066 CDP-alcohol phosphatidyltransferase Theam_0452 PF01872 RibD C-terminal domain Theam_0453 PF00528 Binding-protein-dependent transport system inner membrane component Theam_0454 PF00528 Binding-protein-dependent transport system inner membrane component Theam_0454 PF12911 Theam_0454 Theam_0455 PF00953 Glycosyl transferase family 4 Theam_0456 PF01022 Bacterial regulatory protein, arsR family Theam_0457 PF00132 Bacterial transferase hexapeptide (six repeats) Theam_0457 PF06426 Serine acetyltransferase, N-terminal Theam_0458 PF05036 Sporulation related domain Theam_0459 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Theam_0459 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain Theam_0460 PF10369 Small subunit of acetolactate synthase Theam_0460 PF13710 ACT domain Theam_0461 PF00205 Thiamine pyrophosphate enzyme, central domain Theam_0461 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theam_0461 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Theam_0462 PF00425 chorismate binding enzyme Theam_0462 PF04715 Anthranilate synthase component I, N terminal region Theam_0464 PF00571 CBS domain Theam_0464 PF01380 SIS domain Theam_0465 PF01435 Peptidase family M48 Theam_0466 PF00309 Theam_0466 Theam_0466 PF04552 Sigma-54, DNA binding domain Theam_0466 PF04963 Sigma-54 factor, core binding domain Theam_0467 PF03710 Glutamate-ammonia ligase adenylyltransferase Theam_0467 PF08335 GlnD PII-uridylyltransferase Theam_0470 PF00468 Ribosomal protein L34 Theam_0471 PF00825 Ribonuclease P Theam_0472 PF01809 Theam_0472 Theam_0473 PF02096 60Kd inner membrane protein Theam_0473 PF14849 YidC periplasmic domain Theam_0474 PF00571 CBS domain Theam_0474 PF01595 Theam_0474 Theam_0474 PF03471 Transporter associated domain Theam_0475 PF00571 CBS domain Theam_0475 PF01595 Theam_0475 Theam_0475 PF03471 Transporter associated domain Theam_0476 PF12838 4Fe-4S dicluster domain Theam_0478 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Theam_0478 PF00374 Nickel-dependent hydrogenase Theam_0479 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Theam_0480 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theam_0481 PF00146 NADH dehydrogenase Theam_0482 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_0482 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Theam_0483 PF00027 Cyclic nucleotide-binding domain Theam_0484 PF00374 Nickel-dependent hydrogenase Theam_0485 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theam_0486 PF00175 Oxidoreductase NAD-binding domain Theam_0486 PF00970 Oxidoreductase FAD-binding domain Theam_0486 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Theam_0487 PF17179 Theam_0487 Theam_0488 PF01467 Cytidylyltransferase Theam_0489 PF00171 Aldehyde dehydrogenase family Theam_0490 PF12850 Calcineurin-like phosphoesterase superfamily domain Theam_0491 PF00152 tRNA synthetases class II (D, K and N) Theam_0492 PF02441 Flavoprotein Theam_0493 PF00696 Amino acid kinase family Theam_0494 PF01654 Theam_0494 Theam_0495 PF02322 Theam_0495 Theam_0498 PF05670 Theam_0498 Theam_0498 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Theam_0500 PF17209 Theam_0500 Theam_0501 PF01715 IPP transferase Theam_0502 PF00749 tRNA synthetases class I (E and Q), catalytic domain Theam_0503 PF01312 FlhB HrpN YscU SpaS Family Theam_0504 PF04316 Anti-sigma-28 factor, FlgM Theam_0505 PF02602 Uroporphyrinogen-III synthase HemD Theam_0506 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Theam_0506 PF03900 Porphobilinogen deaminase, C-terminal domain Theam_0507 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Theam_0507 PF01488 Shikimate / quinate 5-dehydrogenase Theam_0507 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Theam_0508 PF01578 Theam_0508 Theam_0509 PF01487 Type I 3-dehydroquinase Theam_0510 PF02641 Uncharacterized ACR, COG1993 Theam_0511 PF00437 Type II/IV secretion system protein Theam_0511 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Theam_0513 PF01520 N-acetylmuramoyl-L-alanine amidase Theam_0514 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Theam_0517 PF01136 Theam_0517 Theam_0517 PF16325 Theam_0517 Theam_0518 PF10134 Theam_0518 Theam_0519 PF07724 AAA domain (Cdc48 subfamily) Theam_0519 PF07728 AAA domain (dynein-related subfamily) Theam_0520 PF00490 Delta-aminolevulinic acid dehydratase Theam_0522 PF00753 Metallo-beta-lactamase superfamily Theam_0523 PF01165 Ribosomal protein S21 Theam_0524 PF09424 Yqey-like protein Theam_0525 PF00488 MutS domain V Theam_0525 PF01713 Smr domain Theam_0526 PF00202 Aminotransferase class-III Theam_0529 PF13520 Amino acid permease Theam_0530 PF02558 Ketopantoate reductase PanE/ApbA Theam_0530 PF08546 Ketopantoate reductase PanE/ApbA C terminal Theam_0531 PF03205 Molybdopterin guanine dinucleotide synthesis protein B Theam_0533 PF00112 Papain family cysteine protease Theam_0533 PF00801 PKD domain Theam_0534 PF00920 Dehydratase family Theam_0535 PF04325 Protein of unknown function (DUF465) Theam_0536 PF00583 Acetyltransferase (GNAT) family Theam_0537 PF00814 Glycoprotease family Theam_0538 PF01478 Type IV leader peptidase family Theam_0538 PF06750 Theam_0538 Theam_0540 PF00270 DEAD/DEAH box helicase Theam_0540 PF00271 Helicase conserved C-terminal domain Theam_0541 PF09723 Theam_0541 Theam_0543 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Theam_0545 PF00005 ABC transporter Theam_0545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Theam_0546 PF06094 AIG2-like family Theam_0548 PF00501 AMP-binding enzyme Theam_0548 PF13193 AMP-binding enzyme C-terminal domain Theam_0548 PF16177 Theam_0548 Theam_0549 PF00271 Helicase conserved C-terminal domain Theam_0549 PF02151 UvrB/uvrC motif Theam_0549 PF04851 Type III restriction enzyme, res subunit Theam_0549 PF12344 Ultra-violet resistance protein B Theam_0550 PF01385 Theam_0550 Theam_0550 PF07282 Theam_0550 Theam_0551 PF13181 Tetratricopeptide repeat Theam_0551 PF13432 Tetratricopeptide repeat Theam_0552 PF04368 Theam_0552 Theam_0557 PF02080 TrkA-C domain Theam_0557 PF02254 TrkA-N domain Theam_0557 PF07885 Ion channel Theam_0558 PF00155 Aminotransferase class I and II Theam_0559 PF00919 Uncharacterized protein family UPF0004 Theam_0559 PF04055 Radical SAM superfamily Theam_0561 PF02374 Anion-transporting ATPase Theam_0563 PF03279 Theam_0563 Theam_0564 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Theam_0565 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Theam_0566 PF04055 Radical SAM superfamily Theam_0566 PF13394 4Fe-4S single cluster domain Theam_0568 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Theam_0569 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Theam_0569 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal Theam_0569 PF13288 DXP reductoisomerase C-terminal domain Theam_0570 PF03129 Anticodon binding domain Theam_0570 PF13393 Histidyl-tRNA synthetase Theam_0571 PF14681 Uracil phosphoribosyltransferase Theam_0573 PF00563 EAL domain Theam_0573 PF00990 GGDEF domain Theam_0573 PF08269 Cache domain Theam_0574 PF13469 Sulfotransferase family Theam_0575 PF00535 Glycosyl transferase family 2 Theam_0576 PF13489 Methyltransferase domain Theam_0577 PF00483 Nucleotidyl transferase Theam_0578 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Theam_0579 PF16363 Theam_0579 Theam_0580 PF04321 RmlD substrate binding domain Theam_0581 PF00850 Histone deacetylase domain Theam_0582 PF00575 S1 RNA binding domain Theam_0582 PF00773 RNB domain Theam_0582 PF08206 Ribonuclease B OB domain Theam_0583 PF13155 Toprim-like Theam_0585 PF09719 Putative redox-active protein (C_GCAxxG_C_C) Theam_0586 PF00113 Enolase, C-terminal TIM barrel domain Theam_0586 PF03952 Enolase, N-terminal domain Theam_0587 PF02367 Uncharacterised P-loop hydrolase UPF0079 Theam_0588 PF02472 Biopolymer transport protein ExbD/TolR Theam_0589 PF00155 Aminotransferase class I and II Theam_0591 PF00578 AhpC/TSA family Theam_0592 PF01649 Ribosomal protein S20 Theam_0593 PF02581 Thiamine monophosphate synthase/TENI Theam_0594 PF04932 Theam_0594 Theam_0595 PF00534 Glycosyl transferases group 1 Theam_0595 PF13439 Glycosyltransferase Family 4 Theam_0596 PF00534 Glycosyl transferases group 1 Theam_0596 PF13439 Glycosyltransferase Family 4 Theam_0597 PF01522 Polysaccharide deacetylase Theam_0598 PF00005 ABC transporter Theam_0598 PF00664 ABC transporter transmembrane region Theam_0599 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Theam_0600 PF00534 Glycosyl transferases group 1 Theam_0600 PF13439 Glycosyltransferase Family 4 Theam_0601 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Theam_0601 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Theam_0601 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Theam_0602 PF00056 lactate/malate dehydrogenase, NAD binding domain Theam_0602 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Theam_0603 PF05681 Theam_0603 Theam_0604 PF08241 Methyltransferase domain Theam_0605 PF04551 GcpE protein Theam_0606 PF02152 Dihydroneopterin aldolase Theam_0607 PF00990 GGDEF domain Theam_0608 PF02677 Theam_0608 Theam_0609 PF00809 Pterin binding enzyme Theam_0609 PF02310 B12 binding domain Theam_0609 PF02574 Homocysteine S-methyltransferase Theam_0609 PF02607 B12 binding domain Theam_0610 PF00156 Phosphoribosyl transferase domain Theam_0611 PF00109 Beta-ketoacyl synthase, N-terminal domain Theam_0611 PF02801 Beta-ketoacyl synthase, C-terminal domain Theam_0612 PF00035 Double-stranded RNA binding motif Theam_0612 PF14622 Ribonuclease-III-like Theam_0613 PF02545 Maf-like protein Theam_0615 PF00072 Response regulator receiver domain Theam_0616 PF02542 YgbB family Theam_0617 PF07977 FabA-like domain Theam_0618 PF00132 Bacterial transferase hexapeptide (six repeats) Theam_0618 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Theam_0619 PF12706 Beta-lactamase superfamily domain Theam_0620 PF03266 NTPase Theam_0621 PF01430 Hsp33 protein Theam_0622 PF07998 Peptidase family M54 Theam_0624 PF01048 Phosphorylase superfamily Theam_0626 PF00909 Ammonium Transporter Family Theam_0627 PF01475 Ferric uptake regulator family Theam_0628 PF00543 Nitrogen regulatory protein P-II Theam_0629 PF00120 Glutamine synthetase, catalytic domain Theam_0629 PF03951 Glutamine synthetase, beta-Grasp domain Theam_0631 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Theam_0631 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Theam_0632 PF12705 PD-(D/E)XK nuclease superfamily Theam_0633 PF02153 Prephenate dehydrogenase Theam_0634 PF00596 Class II Aldolase and Adducin N-terminal domain Theam_0635 PF11845 Theam_0635 Theam_0636 PF14332 Theam_0636 Theam_0638 PF02621 Menaquinone biosynthesis Theam_0639 PF01171 PP-loop family Theam_0640 PF00294 pfkB family carbohydrate kinase Theam_0641 PF04002 RadC-like JAB domain Theam_0642 PF00133 tRNA synthetases class I (I, L, M and V) Theam_0642 PF06827 Zinc finger found in FPG and IleRS Theam_0642 PF08264 Anticodon-binding domain of tRNA Theam_0644 PF00581 Rhodanese-like domain Theam_0645 PF01676 Metalloenzyme superfamily Theam_0645 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Theam_0646 PF01416 tRNA pseudouridine synthase Theam_0647 PF00999 Sodium/hydrogen exchanger family Theam_0648 PF04107 Glutamate-cysteine ligase family 2(GCS2) Theam_0649 PF01019 Gamma-glutamyltranspeptidase Theam_0651 PF01966 HD domain Theam_0651 PF03445 Theam_0651 Theam_0651 PF08335 GlnD PII-uridylyltransferase Theam_0652 PF13091 PLD-like domain Theam_0653 PF03840 Preprotein translocase SecG subunit Theam_0654 PF01370 NAD dependent epimerase/dehydratase family Theam_0655 PF00121 Triosephosphate isomerase Theam_0656 PF06689 ClpX C4-type zinc finger Theam_0656 PF07724 AAA domain (Cdc48 subfamily) Theam_0656 PF10431 C-terminal, D2-small domain, of ClpB protein Theam_0657 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Theam_0658 PF00210 Ferritin-like domain Theam_0660 PF02706 Chain length determinant protein Theam_0661 PF00152 tRNA synthetases class II (D, K and N) Theam_0661 PF01336 OB-fold nucleic acid binding domain Theam_0661 PF02938 GAD domain Theam_0662 PF03772 Theam_0662 Theam_0663 PF00459 Inositol monophosphatase family Theam_0664 PF02080 TrkA-C domain Theam_0664 PF03600 Citrate transporter Theam_0665 PF01583 Adenylylsulphate kinase Theam_0666 PF01747 ATP-sulfurylase Theam_0666 PF14306 PUA-like domain Theam_0667 PF01943 Theam_0667 Theam_0667 PF14667 Polysaccharide biosynthesis C-terminal domain Theam_0668 PF00685 Sulfotransferase domain Theam_0669 PF00535 Glycosyl transferase family 2 Theam_0671 PF00534 Glycosyl transferases group 1 Theam_0671 PF13439 Glycosyltransferase Family 4 Theam_0674 PF00534 Glycosyl transferases group 1 Theam_0674 PF13439 Glycosyltransferase Family 4 Theam_0675 PF02397 Theam_0675 Theam_0676 PF02675 S-adenosylmethionine decarboxylase Theam_0677 PF01258 Prokaryotic dksA/traR C4-type zinc finger Theam_0678 PF00155 Aminotransferase class I and II Theam_0679 PF10756 Theam_0679 Theam_0681 PF00440 Bacterial regulatory proteins, tetR family Theam_0682 PF01869 BadF/BadG/BcrA/BcrD ATPase family Theam_0682 PF09989 Theam_0682 Theam_0683 PF00563 EAL domain Theam_0684 PF02554 Theam_0684 Theam_0684 PF13722 Theam_0684 Theam_0685 PF11823 Theam_0685 Theam_0686 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Theam_0686 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Theam_0688 PF01895 PhoU domain Theam_0689 PF00950 Theam_0689 Theam_0690 PF01904 Protein of unknown function DUF72 Theam_0691 PF03358 NADPH-dependent FMN reductase Theam_0692 PF01926 50S ribosome-binding GTPase Theam_0692 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Theam_0696 PF01920 Prefoldin subunit Theam_0697 PF02996 Prefoldin subunit Theam_0699 PF03673 Theam_0699 Theam_0700 PF00881 Nitroreductase family Theam_0701 PF04055 Radical SAM superfamily Theam_0702 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Theam_0704 PF00155 Aminotransferase class I and II Theam_0706 PF12850 Calcineurin-like phosphoesterase superfamily domain Theam_0707 PF00156 Phosphoribosyl transferase domain Theam_0708 PF00005 ABC transporter Theam_0708 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Theam_0709 PF02548 Ketopantoate hydroxymethyltransferase Theam_0710 PF03193 Protein of unknown function, DUF258 Theam_0711 PF07883 Cupin domain Theam_0712 PF01116 Fructose-bisphosphate aldolase class-II Theam_0713 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel Theam_0713 PF05036 Sporulation related domain Theam_0714 PF00890 FAD binding domain Theam_0714 PF02910 Fumarate reductase flavoprotein C-term Theam_0715 PF01546 Peptidase family M20/M25/M40 Theam_0715 PF07687 Peptidase dimerisation domain Theam_0716 PF09455 CRISPR-associated (Cas) DxTHG family Theam_0717 PF01565 FAD binding domain Theam_0717 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Theam_0718 PF00117 Glutamine amidotransferase class-I Theam_0718 PF06418 CTP synthase N-terminus Theam_0719 PF02348 Cytidylyltransferase Theam_0720 PF13507 CobB/CobQ-like glutamine amidotransferase domain Theam_0721 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Theam_0722 PF02517 CAAX protease self-immunity Theam_0723 PF01252 Theam_0723 Theam_0724 PF01807 CHC2 zinc finger Theam_0724 PF08275 DNA primase catalytic core, N-terminal domain Theam_0724 PF13155 Toprim-like Theam_0725 PF00140 Sigma-70 factor, region 1 Theam_0725 PF03979 Sigma-70 factor, region 1 Theam_0725 PF04539 Sigma-70 region 3 Theam_0725 PF04542 Sigma-70 region 2 Theam_0725 PF04545 Sigma-70, region 4 Theam_0726 PF00849 RNA pseudouridylate synthase Theam_0727 PF00578 AhpC/TSA family Theam_0727 PF10417 C-terminal domain of 1-Cys peroxiredoxin Theam_0728 PF01522 Polysaccharide deacetylase Theam_0729 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Theam_0730 PF05683 Fumarase C-terminus Theam_0731 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Theam_0732 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theam_0733 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Theam_0734 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Theam_0735 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Theam_0736 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Theam_0736 PF10531 SLBB domain Theam_0736 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Theam_0737 PF00037 4Fe-4S binding domain Theam_0737 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theam_0737 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Theam_0737 PF13510 2Fe-2S iron-sulfur cluster binding domain Theam_0738 PF00027 Cyclic nucleotide-binding domain Theam_0739 PF00146 NADH dehydrogenase Theam_0740 PF12838 4Fe-4S dicluster domain Theam_0741 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Theam_0742 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Theam_0743 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_0743 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Theam_0744 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_0745 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_0746 PF03841 L-seryl-tRNA selenium transferase Theam_0746 PF12390 Theam_0746 Theam_0747 PF00593 TonB dependent receptor Theam_0747 PF07715 TonB-dependent Receptor Plug Domain Theam_0749 PF00990 GGDEF domain Theam_0751 PF01476 LysM domain Theam_0753 PF00873 AcrB/AcrD/AcrF family Theam_0754 PF16576 Theam_0754 Theam_0755 PF00117 Glutamine amidotransferase class-I Theam_0756 PF01523 Putative modulator of DNA gyrase Theam_0757 PF02540 NAD synthase Theam_0758 PF00795 Carbon-nitrogen hydrolase Theam_0759 PF07244 Surface antigen variable number repeat Theam_0760 PF11146 Theam_0760 Theam_0761 PF01219 Prokaryotic diacylglycerol kinase Theam_0762 PF01966 HD domain Theam_0762 PF07697 Theam_0762 Theam_0762 PF07698 Theam_0762 Theam_0763 PF02562 PhoH-like protein Theam_0764 PF00924 Mechanosensitive ion channel Theam_0765 PF02463 RecF/RecN/SMC N terminal domain Theam_0765 PF04423 Rad50 zinc hook motif Theam_0767 PF00209 Sodium:neurotransmitter symporter family Theam_0768 PF04055 Radical SAM superfamily Theam_0768 PF13394 4Fe-4S single cluster domain Theam_0769 PF01103 Surface antigen Theam_0769 PF07244 Surface antigen variable number repeat Theam_0770 PF01368 DHH family Theam_0770 PF02272 DHHA1 domain Theam_0771 PF02033 Ribosome-binding factor A Theam_0772 PF01523 Putative modulator of DNA gyrase Theam_0773 PF02511 Thymidylate synthase complementing protein Theam_0774 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Theam_0777 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) Theam_0778 PF13570 PQQ-like domain Theam_0778 PF17170 Theam_0778 Theam_0780 PF01292 Prokaryotic cytochrome b561 Theam_0782 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) Theam_0785 PF00994 Probable molybdopterin binding domain Theam_0785 PF03453 MoeA N-terminal region (domain I and II) Theam_0785 PF03454 MoeA C-terminal region (domain IV) Theam_0786 PF00994 Probable molybdopterin binding domain Theam_0787 PF00005 ABC transporter Theam_0788 PF00528 Binding-protein-dependent transport system inner membrane component Theam_0789 PF13531 Bacterial extracellular solute-binding protein Theam_0790 PF00483 Nucleotidyl transferase Theam_0790 PF01050 Mannose-6-phosphate isomerase Theam_0791 PF08238 Sel1 repeat Theam_0791 PF13432 Tetratricopeptide repeat Theam_0792 PF05036 Sporulation related domain Theam_0793 PF13229 Right handed beta helix region Theam_0794 PF13437 HlyD family secretion protein Theam_0795 PF13641 Glycosyltransferase like family 2 Theam_0796 PF07602 Theam_0796 Theam_0797 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Theam_0797 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Theam_0797 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Theam_0798 PF01596 O-methyltransferase Theam_0799 PF02579 Dinitrogenase iron-molybdenum cofactor Theam_0800 PF00476 DNA polymerase family A Theam_0800 PF01367 5'-3' exonuclease, C-terminal SAM fold Theam_0800 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Theam_0801 PF01225 Mur ligase family, catalytic domain Theam_0801 PF02875 Mur ligase family, glutamate ligase domain Theam_0801 PF08245 Mur ligase middle domain Theam_0802 PF01370 NAD dependent epimerase/dehydratase family Theam_0805 PF16963 Theam_0805 Theam_0807 PF00534 Glycosyl transferases group 1 Theam_0807 PF11997 Theam_0807 Theam_0808 PF16933 Theam_0808 Theam_0809 PF03537 Glycoside-hydrolase family GH114 Theam_0811 PF13429 Tetratricopeptide repeat Theam_0812 PF13086 AAA domain Theam_0812 PF13087 AAA domain Theam_0813 PF01557 Fumarylacetoacetate (FAA) hydrolase family Theam_0813 PF10370 Domain of unknown function (DUF2437) Theam_0815 PF00334 Nucleoside diphosphate kinase Theam_0816 PF04493 Endonuclease V Theam_0817 PF03739 Theam_0817 Theam_0818 PF03739 Theam_0818 Theam_0819 PF02355 Protein export membrane protein Theam_0819 PF07549 SecD/SecF GG Motif Theam_0820 PF02355 Protein export membrane protein Theam_0820 PF07549 SecD/SecF GG Motif Theam_0821 PF01966 HD domain Theam_0822 PF02237 Biotin protein ligase C terminal domain Theam_0822 PF03099 Biotin/lipoate A/B protein ligase family Theam_0823 PF13847 Methyltransferase domain Theam_0824 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Theam_0825 PF01634 ATP phosphoribosyltransferase Theam_0826 PF00551 Formyl transferase Theam_0826 PF01842 ACT domain Theam_0827 PF01380 SIS domain Theam_0827 PF13522 Glutamine amidotransferase domain Theam_0828 PF01926 50S ribosome-binding GTPase Theam_0828 PF10396 GTP-binding protein TrmE N-terminus Theam_0828 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Theam_0829 PF01551 Peptidase family M23 Theam_0830 PF04519 Theam_0830 Theam_0831 PF03744 Theam_0831 Theam_0832 PF00924 Mechanosensitive ion channel Theam_0833 PF02580 D-Tyr-tRNA(Tyr) deacylase Theam_0834 PF01914 Theam_0834 Theam_0835 PF01040 UbiA prenyltransferase family Theam_0836 PF13242 HAD-hyrolase-like Theam_0836 PF13344 Haloacid dehalogenase-like hydrolase Theam_0837 PF00375 Sodium:dicarboxylate symporter family Theam_0838 PF01926 50S ribosome-binding GTPase Theam_0838 PF06071 Protein of unknown function (DUF933) Theam_0839 PF02565 Recombination protein O C terminal Theam_0840 PF00580 UvrD/REP helicase N-terminal domain Theam_0840 PF12705 PD-(D/E)XK nuclease superfamily Theam_0840 PF13361 UvrD-like helicase C-terminal domain Theam_0841 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_0842 PF01063 Aminotransferase class IV Theam_0843 PF00072 Response regulator receiver domain Theam_0844 PF00072 Response regulator receiver domain Theam_0844 PF01584 CheW-like domain Theam_0845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Theam_0846 PF01584 CheW-like domain Theam_0847 PF01584 CheW-like domain Theam_0847 PF01627 Hpt domain Theam_0847 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_0847 PF02895 Signal transducing histidine kinase, homodimeric domain Theam_0849 PF00091 Tubulin/FtsZ family, GTPase domain Theam_0849 PF12327 FtsZ family, C-terminal domain Theam_0850 PF02491 SHS2 domain inserted in FTSA Theam_0850 PF14450 Cell division protein FtsA Theam_0852 PF01820 D-ala D-ala ligase N-terminus Theam_0852 PF07478 D-ala D-ala ligase C-terminus Theam_0853 PF02875 Mur ligase family, glutamate ligase domain Theam_0853 PF08245 Mur ligase middle domain Theam_0854 PF01225 Mur ligase family, catalytic domain Theam_0854 PF02875 Mur ligase family, glutamate ligase domain Theam_0854 PF08245 Mur ligase middle domain Theam_0857 PF04055 Radical SAM superfamily Theam_0857 PF06463 Molybdenum Cofactor Synthesis C Theam_0857 PF13353 4Fe-4S single cluster domain Theam_0858 PF00440 Bacterial regulatory proteins, tetR family Theam_0859 PF00440 Bacterial regulatory proteins, tetR family Theam_0860 PF13437 HlyD family secretion protein Theam_0860 PF13533 Biotin-lipoyl like Theam_0861 PF07690 Major Facilitator Superfamily Theam_0862 PF02321 Outer membrane efflux protein Theam_0863 PF13533 Biotin-lipoyl like Theam_0863 PF16576 Theam_0863 Theam_0864 PF00005 ABC transporter Theam_0865 PF12698 ABC-2 family transporter protein Theam_0866 PF12698 ABC-2 family transporter protein Theam_0867 PF10040 Uncharacterized conserved protein (DUF2276) Theam_0868 PF03787 RAMP superfamily Theam_0870 PF03787 RAMP superfamily Theam_0871 PF03750 Theam_0871 Theam_0873 PF00533 BRCA1 C Terminus (BRCT) domain Theam_0873 PF01653 NAD-dependent DNA ligase adenylation domain Theam_0873 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Theam_0873 PF03120 NAD-dependent DNA ligase OB-fold domain Theam_0873 PF12826 Helix-hairpin-helix motif Theam_0873 PF14520 Helix-hairpin-helix domain Theam_0875 PF01578 Theam_0875 Theam_0876 PF00994 Probable molybdopterin binding domain Theam_0876 PF01967 MoaC family Theam_0877 PF12804 MobA-like NTP transferase domain Theam_0878 PF02391 MoaE protein Theam_0879 PF01641 SelR domain Theam_0881 PF02687 Theam_0881 Theam_0881 PF12704 MacB-like periplasmic core domain Theam_0882 PF02687 Theam_0882 Theam_0882 PF12704 MacB-like periplasmic core domain Theam_0883 PF00005 ABC transporter Theam_0884 PF00448 SRP54-type protein, GTPase domain Theam_0884 PF02881 SRP54-type protein, helical bundle domain Theam_0885 PF00591 Glycosyl transferase family, a/b domain Theam_0885 PF02885 Glycosyl transferase family, helical bundle domain Theam_0886 PF01986 Theam_0886 Theam_0887 PF00814 Glycoprotease family Theam_0889 PF01841 Transglutaminase-like superfamily Theam_0889 PF12969 Domain of Unknown Function with PDB structure (DUF3857) Theam_0889 PF12970 Domain of Unknown Function with PDB structure (DUF3858) Theam_0890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Theam_0890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Theam_0890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Theam_0890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Theam_0892 PF02457 DisA bacterial checkpoint controller nucleotide-binding Theam_0893 PF00809 Pterin binding enzyme Theam_0894 PF00571 CBS domain Theam_0894 PF01368 DHH family Theam_0894 PF01743 Poly A polymerase head domain Theam_0894 PF02272 DHHA1 domain Theam_0894 PF12627 Probable RNA and SrmB- binding site of polymerase A Theam_0895 PF13180 PDZ domain Theam_0896 PF00263 Theam_0896 Theam_0896 PF03958 Bacterial type II/III secretion system short domain Theam_0897 PF00437 Type II/IV secretion system protein Theam_0897 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Theam_0898 PF00482 Type II secretion system (T2SS), protein F Theam_0899 PF11104 Type IV pilus assembly protein PilM; Theam_0901 PF04350 Pilus assembly protein, PilO Theam_0903 PF00263 Theam_0903 Theam_0903 PF03958 Bacterial type II/III secretion system short domain Theam_0905 PF01509 TruB family pseudouridylate synthase (N terminal domain) Theam_0905 PF09157 Pseudouridine synthase II TruB, C-terminal Theam_0905 PF16198 Theam_0905 Theam_0906 PF00270 DEAD/DEAH box helicase Theam_0906 PF01131 DNA topoisomerase Theam_0906 PF01751 Toprim domain Theam_0907 PF00465 Iron-containing alcohol dehydrogenase Theam_0908 PF06230 Protein of unknown function (DUF1009) Theam_0909 PF01029 NusB family Theam_0910 PF00885 6,7-dimethyl-8-ribityllumazine synthase Theam_0911 PF03060 Nitronate monooxygenase Theam_0912 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Theam_0912 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Theam_0913 PF02504 Fatty acid synthesis protein Theam_0914 PF01783 Ribosomal L32p protein family Theam_0915 PF02620 Theam_0915 Theam_0916 PF13624 SurA N-terminal domain Theam_0917 PF09312 SurA N-terminal domain Theam_0917 PF13616 PPIC-type PPIASE domain Theam_0918 PF12225 Theam_0918 Theam_0919 PF02219 Methylenetetrahydrofolate reductase Theam_0920 PF01255 Putative undecaprenyl diphosphate synthase Theam_0921 PF01148 Cytidylyltransferase family Theam_0922 PF00586 AIR synthase related protein, N-terminal domain Theam_0922 PF02769 AIR synthase related protein, C-terminal domain Theam_0923 PF03649 Theam_0923 Theam_0924 PF01924 Hydrogenase formation hypA family Theam_0926 PF00350 Dynamin family Theam_0927 PF00350 Dynamin family Theam_0928 PF00350 Dynamin family Theam_0929 PF00072 Response regulator receiver domain Theam_0929 PF00158 Sigma-54 interaction domain Theam_0929 PF02954 Bacterial regulatory protein, Fis family Theam_0930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_0931 PF09968 Uncharacterized protein domain (DUF2202) Theam_0934 PF14358 Theam_0934 Theam_0935 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Theam_0936 PF02655 ATP-grasp domain Theam_0938 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Theam_0938 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Theam_0939 PF01551 Peptidase family M23 Theam_0939 PF03253 Urea transporter Theam_0942 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Theam_0942 PF02843 Phosphoribosylglycinamide synthetase, C domain Theam_0942 PF02844 Phosphoribosylglycinamide synthetase, N domain Theam_0943 PF01464 Transglycosylase SLT domain Theam_0944 PF01343 Peptidase family S49 Theam_0945 PF01351 Ribonuclease HII Theam_0946 PF04357 Theam_0946 Theam_0947 PF13181 Tetratricopeptide repeat Theam_0948 PF01230 HIT domain Theam_0950 PF00589 Phage integrase family Theam_0950 PF02899 Phage integrase, N-terminal SAM-like domain Theam_0952 PF01978 Sugar-specific transcriptional regulator TrmB Theam_0953 PF08735 Theam_0953 Theam_0954 PF00091 Tubulin/FtsZ family, GTPase domain Theam_0954 PF12327 FtsZ family, C-terminal domain Theam_0955 PF00857 Isochorismatase family Theam_0956 PF13189 Cytidylate kinase-like family Theam_0957 PF04079 Putative transcriptional regulators (Ypuh-like) Theam_0958 PF03033 Glycosyltransferase family 28 N-terminal domain Theam_0958 PF04101 Glycosyltransferase family 28 C-terminal domain Theam_0959 PF01098 Theam_0959 Theam_0960 PF02875 Mur ligase family, glutamate ligase domain Theam_0960 PF08245 Mur ligase middle domain Theam_0962 PF00675 Insulinase (Peptidase family M16) Theam_0962 PF05193 Peptidase M16 inactive domain Theam_0963 PF13145 PPIC-type PPIASE domain Theam_0964 PF03747 ADP-ribosylglycohydrolase Theam_0967 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_0967 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Theam_0968 PF01325 Iron dependent repressor, N-terminal DNA binding domain Theam_0968 PF02742 Iron dependent repressor, metal binding and dimerisation domain Theam_0969 PF04055 Radical SAM superfamily Theam_0970 PF04055 Radical SAM superfamily Theam_0972 PF00391 PEP-utilising enzyme, mobile domain Theam_0972 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Theam_0972 PF02896 PEP-utilising enzyme, TIM barrel domain Theam_0973 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Theam_0973 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Theam_0974 PF00342 Phosphoglucose isomerase Theam_0975 PF02353 Mycolic acid cyclopropane synthetase Theam_0976 PF00483 Nucleotidyl transferase Theam_0976 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Theam_0976 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Theam_0977 PF03065 Glycosyl hydrolase family 57 Theam_0978 PF03065 Glycosyl hydrolase family 57 Theam_0978 PF09094 Domain of unknown function (DUF1925) Theam_0978 PF09095 Domain of unknown function (DUF1926) Theam_0979 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Theam_0979 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Theam_0980 PF00534 Glycosyl transferases group 1 Theam_0980 PF08323 Starch synthase catalytic domain Theam_0981 PF07498 Rho termination factor, N-terminal domain Theam_0982 PF03065 Glycosyl hydrolase family 57 Theam_0982 PF09210 Domain of unknown function (DUF1957) Theam_0983 PF00480 ROK family Theam_0984 PF00698 Acyl transferase domain Theam_0985 PF00317 Ribonucleotide reductase, all-alpha domain Theam_0985 PF02867 Ribonucleotide reductase, barrel domain Theam_0986 PF03415 Clostripain family Theam_0988 PF00586 AIR synthase related protein, N-terminal domain Theam_0988 PF02769 AIR synthase related protein, C-terminal domain Theam_0989 PF02673 Theam_0989 Theam_0990 PF00437 Type II/IV secretion system protein Theam_0991 PF00482 Type II secretion system (T2SS), protein F Theam_0992 PF00155 Aminotransferase class I and II Theam_0993 PF00072 Response regulator receiver domain Theam_0993 PF02954 Bacterial regulatory protein, Fis family Theam_0994 PF13177 DNA polymerase III, delta subunit Theam_0995 PF00122 E1-E2 ATPase Theam_0995 PF00690 Cation transporter/ATPase, N-terminus Theam_0995 PF00702 haloacid dehalogenase-like hydrolase Theam_0997 PF00571 CBS domain Theam_0997 PF00654 Voltage gated chloride channel Theam_0998 PF01645 Conserved region in glutamate synthase Theam_0998 PF13187 4Fe-4S dicluster domain Theam_0999 PF13247 4Fe-4S dicluster domain Theam_1000 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_1001 PF00310 Glutamine amidotransferases class-II Theam_1002 PF01493 GXGXG motif Theam_1003 PF00291 Pyridoxal-phosphate dependent enzyme Theam_1004 PF00563 EAL domain Theam_1004 PF00990 GGDEF domain Theam_1005 PF00579 tRNA synthetases class I (W and Y) Theam_1005 PF01479 S4 domain Theam_1006 PF00583 Acetyltransferase (GNAT) family Theam_1007 PF02687 Theam_1007 Theam_1007 PF12704 MacB-like periplasmic core domain Theam_1008 PF00152 tRNA synthetases class II (D, K and N) Theam_1008 PF01336 OB-fold nucleic acid binding domain Theam_1009 PF02405 Theam_1009 Theam_1010 PF00005 ABC transporter Theam_1011 PF02470 Theam_1011 Theam_1012 PF00117 Glutamine amidotransferase class-I Theam_1013 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_1014 PF01894 Uncharacterised protein family UPF0047 Theam_1015 PF00762 Ferrochelatase Theam_1016 PF01593 Flavin containing amine oxidoreductase Theam_1017 PF00206 Lyase Theam_1017 PF10397 Adenylosuccinate lyase C-terminus Theam_1018 PF01881 CRISPR associated protein Cas6 Theam_1019 PF00398 Ribosomal RNA adenine dimethylase Theam_1020 PF00384 Molybdopterin oxidoreductase Theam_1020 PF01568 Molydopterin dinucleotide binding domain Theam_1020 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theam_1021 PF00285 Citrate synthase Theam_1021 PF00549 CoA-ligase Theam_1022 PF08442 ATP-grasp domain Theam_1022 PF16114 Theam_1022 Theam_1023 PF03971 Monomeric isocitrate dehydrogenase Theam_1024 PF00330 Aconitase family (aconitate hydratase) Theam_1024 PF00694 Aconitase C-terminal domain Theam_1026 PF01139 tRNA-splicing ligase RtcB Theam_1027 PF08376 Nitrate and nitrite sensing Theam_1029 PF04458 Theam_1029 Theam_1030 PF00571 CBS domain Theam_1030 PF00654 Voltage gated chloride channel Theam_1031 PF01119 DNA mismatch repair protein, C-terminal domain Theam_1031 PF08676 MutL C terminal dimerisation domain Theam_1031 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1032 PF00860 Permease family Theam_1033 PF01435 Peptidase family M48 Theam_1034 PF00654 Voltage gated chloride channel Theam_1035 PF02441 Flavoprotein Theam_1035 PF04127 DNA / pantothenate metabolism flavoprotein Theam_1036 PF00588 SpoU rRNA Methylase family Theam_1036 PF08032 RNA 2'-O ribose methyltransferase substrate binding Theam_1038 PF00583 Acetyltransferase (GNAT) family Theam_1039 PF01554 MatE Theam_1040 PF00512 His Kinase A (phospho-acceptor) domain Theam_1040 PF00672 HAMP domain Theam_1040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1040 PF13188 PAS domain Theam_1041 PF01256 Carbohydrate kinase Theam_1041 PF03853 YjeF-related protein N-terminus Theam_1042 PF01327 Polypeptide deformylase Theam_1043 PF01261 Xylose isomerase-like TIM barrel Theam_1045 PF01502 Phosphoribosyl-AMP cyclohydrolase Theam_1046 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Theam_1047 PF10114 Theam_1047 Theam_1048 PF00990 GGDEF domain Theam_1049 PF01230 HIT domain Theam_1050 PF00905 Penicillin binding protein transpeptidase domain Theam_1051 PF09376 NurA domain Theam_1052 PF08241 Methyltransferase domain Theam_1053 PF00581 Rhodanese-like domain Theam_1054 PF05036 Sporulation related domain Theam_1055 PF04055 Radical SAM superfamily Theam_1056 PF01161 Phosphatidylethanolamine-binding protein Theam_1057 PF00753 Metallo-beta-lactamase superfamily Theam_1057 PF07521 RNA-metabolising metallo-beta-lactamase Theam_1057 PF10996 Beta-Casp domain Theam_1060 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Theam_1061 PF04055 Radical SAM superfamily Theam_1062 PF00011 Hsp20/alpha crystallin family Theam_1063 PF02811 PHP domain Theam_1063 PF14520 Helix-hairpin-helix domain Theam_1063 PF14716 Helix-hairpin-helix domain Theam_1063 PF14791 DNA polymerase beta thumb Theam_1064 PF03061 Thioesterase superfamily Theam_1066 PF01168 Alanine racemase, N-terminal domain Theam_1067 PF01959 Theam_1067 Theam_1069 PF01370 NAD dependent epimerase/dehydratase family Theam_1070 PF13411 MerR HTH family regulatory protein Theam_1071 PF00004 ATPase family associated with various cellular activities (AAA) Theam_1071 PF02151 UvrB/uvrC motif Theam_1071 PF02861 Clp amino terminal domain Theam_1071 PF07724 AAA domain (Cdc48 subfamily) Theam_1071 PF10431 C-terminal, D2-small domain, of ClpB protein Theam_1073 PF04233 Theam_1073 Theam_1074 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Theam_1075 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) Theam_1076 PF03190 Protein of unknown function, DUF255 Theam_1077 PF04055 Radical SAM superfamily Theam_1077 PF13394 4Fe-4S single cluster domain Theam_1079 PF12706 Beta-lactamase superfamily domain Theam_1081 PF01043 SecA preprotein cross-linking domain Theam_1081 PF07516 SecA Wing and Scaffold domain Theam_1081 PF07517 SecA DEAD-like domain Theam_1082 PF00877 NlpC/P60 family Theam_1082 PF01476 LysM domain Theam_1083 PF13180 PDZ domain Theam_1083 PF13365 Trypsin-like peptidase domain Theam_1084 PF00140 Sigma-70 factor, region 1 Theam_1084 PF04539 Sigma-70 region 3 Theam_1084 PF04542 Sigma-70 region 2 Theam_1084 PF04545 Sigma-70, region 4 Theam_1085 PF00691 OmpA family Theam_1085 PF13677 Theam_1085 Theam_1086 PF00691 OmpA family Theam_1086 PF13677 Theam_1086 Theam_1087 PF01618 Theam_1087 Theam_1088 PF01565 FAD binding domain Theam_1088 PF02913 FAD linked oxidases, C-terminal domain Theam_1089 PF02706 Chain length determinant protein Theam_1089 PF13807 Theam_1089 Theam_1090 PF02563 Polysaccharide biosynthesis/export protein Theam_1090 PF10531 SLBB domain Theam_1092 PF06082 Theam_1092 Theam_1093 PF03023 Theam_1093 Theam_1094 PF01790 Theam_1094 Theam_1095 PF01063 Aminotransferase class IV Theam_1096 PF00111 2Fe-2S iron-sulfur cluster binding domain Theam_1096 PF14574 Domain of unknown function (DUF4445) Theam_1097 PF16256 Theam_1097 Theam_1098 PF07963 Prokaryotic N-terminal methylation motif Theam_1098 PF08334 Type II secretion system (T2SS), protein G Theam_1099 PF00588 SpoU rRNA Methylase family Theam_1099 PF08032 RNA 2'-O ribose methyltransferase substrate binding Theam_1101 PF00512 His Kinase A (phospho-acceptor) domain Theam_1101 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1102 PF00072 Response regulator receiver domain Theam_1102 PF00158 Sigma-54 interaction domain Theam_1102 PF02954 Bacterial regulatory protein, Fis family Theam_1103 PF12838 4Fe-4S dicluster domain Theam_1106 PF01208 Uroporphyrinogen decarboxylase (URO-D) Theam_1107 PF03372 Endonuclease/Exonuclease/phosphatase family Theam_1108 PF01618 Theam_1108 Theam_1109 PF08704 tRNA methyltransferase complex GCD14 subunit Theam_1110 PF01464 Transglycosylase SLT domain Theam_1111 PF01709 Transcriptional regulator Theam_1112 PF01402 Ribbon-helix-helix protein, copG family Theam_1112 PF08753 NikR C terminal nickel binding domain Theam_1113 PF01026 TatD related DNase Theam_1113 PF04055 Radical SAM superfamily Theam_1113 PF13394 4Fe-4S single cluster domain Theam_1114 PF05036 Sporulation related domain Theam_1115 PF00750 tRNA synthetases class I (R) Theam_1115 PF03485 Arginyl tRNA synthetase N terminal domain Theam_1115 PF05746 DALR anticodon binding domain Theam_1116 PF00708 Acylphosphatase Theam_1116 PF01300 Telomere recombination Theam_1116 PF07503 HypF finger Theam_1117 PF00374 Nickel-dependent hydrogenase Theam_1118 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theam_1118 PF13187 4Fe-4S dicluster domain Theam_1119 PF04432 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus Theam_1120 PF01022 Bacterial regulatory protein, arsR family Theam_1121 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theam_1121 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal Theam_1122 PF00374 Nickel-dependent hydrogenase Theam_1123 PF01292 Prokaryotic cytochrome b561 Theam_1124 PF01750 Hydrogenase maturation protease Theam_1125 PF01455 HupF/HypC family Theam_1126 PF01155 Hydrogenase expression/synthesis hypA family Theam_1127 PF01209 ubiE/COQ5 methyltransferase family Theam_1128 PF02492 CobW/HypB/UreG, nucleotide-binding domain Theam_1130 PF02321 Outer membrane efflux protein Theam_1131 PF00529 HlyD family secretion protein Theam_1131 PF16576 Theam_1131 Theam_1132 PF00301 Rubredoxin Theam_1133 PF00753 Metallo-beta-lactamase superfamily Theam_1136 PF02472 Biopolymer transport protein ExbD/TolR Theam_1137 PF01618 Theam_1137 Theam_1138 PF02637 GatB domain Theam_1138 PF02934 GatB/GatE catalytic domain Theam_1139 PF03600 Citrate transporter Theam_1140 PF00905 Penicillin binding protein transpeptidase domain Theam_1140 PF00912 Transglycosylase Theam_1141 PF00521 DNA gyrase/topoisomerase IV, subunit A Theam_1141 PF03989 DNA gyrase C-terminal domain, beta-propeller Theam_1142 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theam_1142 PF02403 Seryl-tRNA synthetase N-terminal domain Theam_1150 PF00072 Response regulator receiver domain Theam_1150 PF00486 Transcriptional regulatory protein, C terminal Theam_1151 PF00005 ABC transporter Theam_1151 PF12399 Branched-chain amino acid ATP-binding cassette transporter Theam_1152 PF03968 OstA-like protein Theam_1153 PF06835 Lipopolysaccharide-assembly, LptC-related Theam_1154 PF08282 haloacid dehalogenase-like hydrolase Theam_1155 PF12850 Calcineurin-like phosphoesterase superfamily domain Theam_1156 PF00034 Cytochrome c Theam_1156 PF03150 Di-haem cytochrome c peroxidase Theam_1157 PF13500 AAA domain Theam_1159 PF02561 Flagellar protein FliS Theam_1160 PF02465 Theam_1160 Theam_1160 PF07195 Theam_1160 Theam_1161 PF03646 FlaG protein Theam_1162 PF00669 Bacterial flagellin N-terminal helical region Theam_1162 PF00700 Bacterial flagellin C-terminal helical region Theam_1163 PF00535 Glycosyl transferase family 2 Theam_1166 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Theam_1166 PF01872 RibD C-terminal domain Theam_1168 PF00579 tRNA synthetases class I (W and Y) Theam_1170 PF13036 Protein of unknown function (DUF3897) Theam_1172 PF03783 Curli production assembly/transport component CsgG Theam_1173 PF01259 SAICAR synthetase Theam_1174 PF00156 Phosphoribosyl transferase domain Theam_1174 PF13537 Glutamine amidotransferase domain Theam_1176 PF00905 Penicillin binding protein transpeptidase domain Theam_1176 PF03717 Penicillin-binding Protein dimerisation domain Theam_1177 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Theam_1177 PF02824 TGS domain Theam_1177 PF03129 Anticodon binding domain Theam_1177 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Theam_1178 PF00707 Translation initiation factor IF-3, C-terminal domain Theam_1178 PF05198 Translation initiation factor IF-3, N-terminal domain Theam_1179 PF01632 Ribosomal protein L35 Theam_1180 PF00453 Ribosomal protein L20 Theam_1181 PF02073 Thermophilic metalloprotease (M29) Theam_1182 PF01541 GIY-YIG catalytic domain Theam_1182 PF02151 UvrB/uvrC motif Theam_1182 PF08459 UvrC Helix-hairpin-helix N-terminal Theam_1183 PF01242 6-pyruvoyl tetrahydropterin synthase Theam_1184 PF03602 Conserved hypothetical protein 95 Theam_1185 PF03548 Outer membrane lipoprotein carrier protein LolA Theam_1186 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Theam_1187 PF04098 Rad52/22 family double-strand break repair protein Theam_1188 PF00204 DNA gyrase B Theam_1188 PF00986 DNA gyrase B subunit, carboxyl terminus Theam_1188 PF01751 Toprim domain Theam_1188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1189 PF02224 Cytidylate kinase Theam_1190 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Theam_1191 PF00633 Helix-hairpin-helix motif Theam_1191 PF00730 HhH-GPD superfamily base excision DNA repair protein Theam_1192 PF00793 DAHP synthetase I family Theam_1194 PF00849 RNA pseudouridylate synthase Theam_1194 PF01479 S4 domain Theam_1195 PF01791 DeoC/LacD family aldolase Theam_1196 PF01687 Riboflavin kinase Theam_1196 PF06574 FAD synthetase Theam_1197 PF01926 50S ribosome-binding GTPase Theam_1197 PF07650 KH domain Theam_1200 PF00849 RNA pseudouridylate synthase Theam_1200 PF01479 S4 domain Theam_1203 PF01409 tRNA synthetases class II core domain (F) Theam_1203 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Theam_1204 PF01588 Putative tRNA binding domain Theam_1204 PF03147 Ferredoxin-fold anticodon binding domain Theam_1204 PF03483 B3/4 domain Theam_1204 PF03484 tRNA synthetase B5 domain Theam_1205 PF05164 Cell division protein ZapA Theam_1206 PF01812 5-formyltetrahydrofolate cyclo-ligase family Theam_1207 PF00013 KH domain Theam_1207 PF01966 HD domain Theam_1207 PF12072 Theam_1207 Theam_1208 PF00009 Elongation factor Tu GTP binding domain Theam_1208 PF03144 Elongation factor Tu domain 2 Theam_1208 PF09106 Elongation factor SelB, winged helix Theam_1208 PF09107 Elongation factor SelB, winged helix Theam_1209 PF03547 Theam_1209 Theam_1211 PF02222 ATP-grasp domain Theam_1212 PF01625 Peptide methionine sulfoxide reductase Theam_1213 PF00795 Carbon-nitrogen hydrolase Theam_1215 PF03807 NADP oxidoreductase coenzyme F420-dependent Theam_1215 PF14748 Pyrroline-5-carboxylate reductase dimerisation Theam_1217 PF08543 Phosphomethylpyrimidine kinase Theam_1218 PF02502 Ribose/Galactose Isomerase Theam_1219 PF00464 Serine hydroxymethyltransferase Theam_1220 PF00924 Mechanosensitive ion channel Theam_1221 PF00118 TCP-1/cpn60 chaperonin family Theam_1222 PF00166 Chaperonin 10 Kd subunit Theam_1223 PF01841 Transglutaminase-like superfamily Theam_1225 PF07396 Phosphate-selective porin O and P Theam_1226 PF00384 Molybdopterin oxidoreductase Theam_1226 PF01568 Molydopterin dinucleotide binding domain Theam_1226 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Theam_1226 PF13247 4Fe-4S dicluster domain Theam_1227 PF09923 Theam_1227 Theam_1228 PF00571 CBS domain Theam_1229 PF02616 ScpA/B protein Theam_1230 PF02899 Phage integrase, N-terminal SAM-like domain Theam_1231 PF01464 Transglycosylase SLT domain Theam_1232 PF12801 Theam_1232 Theam_1234 PF10609 ParA/MinD ATPase like Theam_1235 PF00459 Inositol monophosphatase family Theam_1237 PF00072 Response regulator receiver domain Theam_1237 PF00486 Transcriptional regulatory protein, C terminal Theam_1238 PF00512 His Kinase A (phospho-acceptor) domain Theam_1238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1240 PF03061 Thioesterase superfamily Theam_1242 PF00472 RF-1 domain Theam_1242 PF03462 PCRF domain Theam_1243 PF10947 Theam_1243 Theam_1244 PF04055 Radical SAM superfamily Theam_1244 PF13353 4Fe-4S single cluster domain Theam_1246 PF00132 Bacterial transferase hexapeptide (six repeats) Theam_1246 PF14602 Hexapeptide repeat of succinyl-transferase Theam_1246 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Theam_1247 PF00133 tRNA synthetases class I (I, L, M and V) Theam_1247 PF08264 Anticodon-binding domain of tRNA Theam_1247 PF09334 tRNA synthetases class I (M) Theam_1248 PF03537 Glycoside-hydrolase family GH114 Theam_1249 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Theam_1249 PF05221 S-adenosyl-L-homocysteine hydrolase Theam_1250 PF00132 Bacterial transferase hexapeptide (six repeats) Theam_1250 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Theam_1251 PF03938 Outer membrane protein (OmpH-like) Theam_1252 PF01103 Surface antigen Theam_1252 PF07244 Surface antigen variable number repeat Theam_1253 PF00512 His Kinase A (phospho-acceptor) domain Theam_1253 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1254 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Theam_1254 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Theam_1255 PF02674 Theam_1255 Theam_1256 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Theam_1256 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Theam_1257 PF01066 CDP-alcohol phosphatidyltransferase Theam_1258 PF01594 Theam_1258 Theam_1259 PF01121 Dephospho-CoA kinase Theam_1260 PF13277 YmdB-like protein Theam_1261 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Theam_1261 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Theam_1263 PF13664 Theam_1263 Theam_1264 PF01479 S4 domain Theam_1265 PF00501 AMP-binding enzyme Theam_1266 PF01678 Diaminopimelate epimerase Theam_1267 PF03167 Uracil DNA glycosylase superfamily Theam_1268 PF00730 HhH-GPD superfamily base excision DNA repair protein Theam_1268 PF10576 Iron-sulfur binding domain of endonuclease III Theam_1269 PF02310 B12 binding domain Theam_1269 PF04055 Radical SAM superfamily Theam_1270 PF02754 Theam_1270 Theam_1271 PF13085 2Fe-2S iron-sulfur cluster binding domain Theam_1271 PF13183 4Fe-4S dicluster domain Theam_1272 PF00890 FAD binding domain Theam_1272 PF02910 Fumarate reductase flavoprotein C-term Theam_1273 PF00890 FAD binding domain Theam_1273 PF02910 Fumarate reductase flavoprotein C-term Theam_1274 PF13085 2Fe-2S iron-sulfur cluster binding domain Theam_1274 PF13183 4Fe-4S dicluster domain Theam_1275 PF02754 Theam_1275 Theam_1276 PF02321 Outer membrane efflux protein Theam_1278 PF00939 Sodium:sulfate symporter transmembrane region Theam_1279 PF00224 Pyruvate kinase, barrel domain Theam_1279 PF02887 Pyruvate kinase, alpha/beta domain Theam_1280 PF02834 LigT like Phosphoesterase Theam_1281 PF04286 Theam_1281 Theam_1282 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Theam_1282 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Theam_1282 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Theam_1282 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Theam_1283 PF06745 KaiC Theam_1284 PF03641 Possible lysine decarboxylase Theam_1287 PF01202 Shikimate kinase Theam_1288 PF03706 Theam_1288 Theam_1289 PF00535 Glycosyl transferase family 2 Theam_1290 PF13231 Theam_1290 Theam_1292 PF13231 Theam_1292 Theam_1293 PF02146 Sir2 family Theam_1295 PF13673 Acetyltransferase (GNAT) domain Theam_1296 PF00753 Metallo-beta-lactamase superfamily Theam_1297 PF00448 SRP54-type protein, GTPase domain Theam_1297 PF02881 SRP54-type protein, helical bundle domain Theam_1297 PF02978 Signal peptide binding domain Theam_1298 PF00886 Ribosomal protein S16 Theam_1299 PF13083 KH domain Theam_1301 PF00923 Transaldolase Theam_1302 PF04307 Theam_1302 Theam_1303 PF00753 Metallo-beta-lactamase superfamily Theam_1304 PF01936 NYN domain Theam_1305 PF01545 Cation efflux family Theam_1305 PF02579 Dinitrogenase iron-molybdenum cofactor Theam_1305 PF16916 Theam_1305 Theam_1306 PF01935 Domain of unknown function DUF87 Theam_1306 PF05872 Theam_1306 Theam_1306 PF09378 HAS barrel domain Theam_1307 PF01910 Domain of unknown function DUF77 Theam_1308 PF01894 Uncharacterised protein family UPF0047 Theam_1309 PF02569 Pantoate-beta-alanine ligase Theam_1310 PF03631 Theam_1310 Theam_1312 PF00696 Amino acid kinase family Theam_1312 PF01472 PUA domain Theam_1313 PF01018 GTP1/OBG Theam_1313 PF01926 50S ribosome-binding GTPase Theam_1316 PF05175 Methyltransferase small domain Theam_1318 PF00300 Histidine phosphatase superfamily (branch 1) Theam_1319 PF02503 Polyphosphate kinase middle domain Theam_1319 PF13089 Polyphosphate kinase N-terminal domain Theam_1319 PF13090 Polyphosphate kinase C-terminal domain Theam_1320 PF02541 Ppx/GppA phosphatase family Theam_1321 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_1322 PF10938 YfdX protein Theam_1323 PF00316 Fructose-1-6-bisphosphatase Theam_1324 PF04055 Radical SAM superfamily Theam_1326 PF03966 Trm112p-like protein Theam_1327 PF00815 Histidinol dehydrogenase Theam_1328 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Theam_1328 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Theam_1329 PF14522 Cytochrome c7 Theam_1330 PF01979 Amidohydrolase family Theam_1331 PF01972 Serine dehydrogenase proteinase Theam_1332 PF02559 CarD-like/TRCF domain Theam_1333 PF01938 TRAM domain Theam_1334 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Theam_1335 PF00027 Cyclic nucleotide-binding domain Theam_1335 PF13545 Crp-like helix-turn-helix domain Theam_1336 PF11756 Theam_1336 Theam_1337 PF03063 Prismane/CO dehydrogenase family Theam_1338 PF02579 Dinitrogenase iron-molybdenum cofactor Theam_1339 PF08901 Theam_1339 Theam_1341 PF03749 Sugar fermentation stimulation protein Theam_1342 PF00300 Histidine phosphatase superfamily (branch 1) Theam_1343 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_1343 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Theam_1344 PF09936 SAM-dependent RNA methyltransferase Theam_1345 PF01636 Phosphotransferase enzyme family Theam_1345 PF03109 Theam_1345 Theam_1347 PF04453 Organic solvent tolerance protein Theam_1349 PF12679 Theam_1349 Theam_1350 PF00005 ABC transporter Theam_1351 PF07963 Prokaryotic N-terminal methylation motif Theam_1352 PF07963 Prokaryotic N-terminal methylation motif Theam_1353 PF02516 Oligosaccharyl transferase STT3 subunit Theam_1354 PF00753 Metallo-beta-lactamase superfamily Theam_1354 PF07521 RNA-metabolising metallo-beta-lactamase Theam_1354 PF10996 Beta-Casp domain Theam_1355 PF00085 Thioredoxin Theam_1356 PF00133 tRNA synthetases class I (I, L, M and V) Theam_1356 PF08264 Anticodon-binding domain of tRNA Theam_1356 PF09334 tRNA synthetases class I (M) Theam_1356 PF13603 Leucyl-tRNA synthetase, Domain 2 Theam_1357 PF04390 Lipopolysaccharide-assembly Theam_1359 PF01206 Sulfurtransferase TusA Theam_1359 PF02635 DsrE/DsrF-like family Theam_1361 PF11127 Protein of unknown function (DUF2892) Theam_1363 PF13174 Tetratricopeptide repeat Theam_1363 PF13181 Tetratricopeptide repeat Theam_1363 PF13414 TPR repeat Theam_1364 PF01227 GTP cyclohydrolase I Theam_1365 PF00004 ATPase family associated with various cellular activities (AAA) Theam_1365 PF01434 Peptidase family M41 Theam_1365 PF06480 FtsH Extracellular Theam_1366 PF00156 Phosphoribosyl transferase domain Theam_1367 PF01171 PP-loop family Theam_1367 PF11734 TilS substrate C-terminal domain Theam_1368 PF00764 Arginosuccinate synthase Theam_1369 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Theam_1369 PF05697 Bacterial trigger factor protein (TF) Theam_1369 PF05698 Bacterial trigger factor protein (TF) C-terminus Theam_1370 PF00072 Response regulator receiver domain Theam_1370 PF00158 Sigma-54 interaction domain Theam_1370 PF02954 Bacterial regulatory protein, Fis family Theam_1371 PF00512 His Kinase A (phospho-acceptor) domain Theam_1371 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Theam_1372 PF00586 AIR synthase related protein, N-terminal domain Theam_1372 PF02769 AIR synthase related protein, C-terminal domain Theam_1373 PF09123 Domain of unknown function (DUF1931) Theam_1375 PF09918 Theam_1375 Theam_1376 PF01544 CorA-like Mg2+ transporter protein Theam_1377 PF13380 CoA binding domain Theam_1377 PF13549 ATP-grasp domain Theam_1377 PF13607 Succinyl-CoA ligase like flavodoxin domain Theam_1378 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Theam_1378 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Theam_1379 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theam_1379 PF12367 Theam_1379 Theam_1383 PF01850 PIN domain Theam_1384 PF00669 Bacterial flagellin N-terminal helical region Theam_1385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Theam_1387 PF07238 PilZ domain Theam_1388 PF02698 DUF218 domain Theam_1389 PF04055 Radical SAM superfamily Theam_1389 PF06968 Biotin and Thiamin Synthesis associated domain Theam_1390 PF04670 Gtr1/RagA G protein conserved region Theam_1391 PF03259 Roadblock/LC7 domain Theam_1392 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theam_1393 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Theam_1393 PF17147 Theam_1393 Theam_1394 PF14697 4Fe-4S dicluster domain Theam_1395 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Theam_1396 PF13662 Toprim domain Theam_1397 PF02575 YbaB/EbfC DNA-binding family Theam_1398 PF01926 50S ribosome-binding GTPase Theam_1398 PF13167 Theam_1398 Theam_1398 PF16360 Theam_1398 Theam_1399 PF13181 Tetratricopeptide repeat Theam_1400 PF13624 SurA N-terminal domain Theam_1401 PF03755 Theam_1401 Theam_1401 PF08340 Theam_1401 Theam_1402 PF00625 Guanylate kinase Theam_1403 PF01192 RNA polymerase Rpb6 Theam_1404 PF00175 Oxidoreductase NAD-binding domain Theam_1404 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Theam_1405 PF02754 Theam_1405 Theam_1405 PF13183 4Fe-4S dicluster domain Theam_1407 PF00990 GGDEF domain Theam_1407 PF01966 HD domain Theam_1408 PF00549 CoA-ligase Theam_1408 PF08442 ATP-grasp domain Theam_1409 PF00549 CoA-ligase Theam_1409 PF02629 CoA binding domain Theam_1410 PF12838 4Fe-4S dicluster domain Theam_1411 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Theam_1411 PF17147 Theam_1411 Theam_1412 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Theam_1413 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Theam_1418 PF00202 Aminotransferase class-III Theam_1419 PF00582 Universal stress protein family Theam_1420 PF00582 Universal stress protein family Theam_1421 PF02568 Thiamine biosynthesis protein (ThiI) Theam_1421 PF05670 Theam_1421 Theam_1422 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Theam_1422 PF16321 Theam_1422 Theam_1423 PF05685 Putative restriction endonuclease Theam_1424 PF00009 Elongation factor Tu GTP binding domain Theam_1424 PF00679 Elongation factor G C-terminus Theam_1424 PF03144 Elongation factor Tu domain 2 Theam_1424 PF06421 GTP-binding protein LepA C-terminus Theam_1426 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Theam_1428 PF07669 Eco57I restriction-modification methylase Theam_1429 PF00176 SNF2 family N-terminal domain Theam_1429 PF00271 Helicase conserved C-terminal domain Theam_1429 PF13091 PLD-like domain Theam_1430 PF00719 Inorganic pyrophosphatase Theam_1431 PF04023 FeoA domain Theam_1432 PF02421 Ferrous iron transport protein B Theam_1432 PF07664 Theam_1432 Theam_1432 PF07670 Nucleoside recognition Theam_1433 PF05362 Lon protease (S16) C-terminal proteolytic domain Theam_1433 PF06745 KaiC Theam_1435 PF02811 PHP domain Theam_1436 PF00730 HhH-GPD superfamily base excision DNA repair protein Theam_1437 PF07238 PilZ domain Theam_1440 PF01312 FlhB HrpN YscU SpaS Family Theam_1441 PF01311 Theam_1441 Theam_1442 PF01313 Theam_1442 Theam_1443 PF00813 Theam_1443 Theam_1444 PF01052 Surface presentation of antigens (SPOA) Theam_1445 PF03748 Theam_1445 Theam_1446 PF00460 Flagella basal body rod protein Theam_1446 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Theam_1446 PF07559 Flagellar basal body protein FlaE Theam_1447 PF03963 Theam_1447 Theam_1447 PF13860 FlgD Ig-like domain Theam_1448 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theam_1448 PF02874 ATP synthase alpha/beta family, beta-barrel domain Theam_1450 PF01514 Secretory protein of YscJ/FliF family Theam_1450 PF08345 Theam_1450 Theam_1451 PF02049 Theam_1451 Theam_1452 PF00460 Flagella basal body rod protein Theam_1452 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Theam_1454 PF13432 Tetratricopeptide repeat Theam_1456 PF04542 Sigma-70 region 2 Theam_1456 PF04545 Sigma-70, region 4 Theam_1457 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Theam_1458 PF00448 SRP54-type protein, GTPase domain Theam_1459 PF00771 FHIPEP family Theam_1461 PF02119 Theam_1461 Theam_1462 PF02107 Theam_1462 Theam_1463 PF13144 SAF-like Theam_1464 PF00460 Flagella basal body rod protein Theam_1464 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Theam_1465 PF00460 Flagella basal body rod protein Theam_1465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Theam_1467 PF01052 Surface presentation of antigens (SPOA) Theam_1467 PF02154 Flagellar motor switch protein FliM Theam_1468 PF01706 FliG C-terminal domain Theam_1468 PF14841 FliG middle domain Theam_1468 PF14842 FliG N-terminal domain Theam_1469 PF03350 Theam_1469 Theam_1470 PF03600 Citrate transporter Theam_1471 PF02463 RecF/RecN/SMC N terminal domain Theam_1472 PF01926 50S ribosome-binding GTPase Theam_1473 PF00578 AhpC/TSA family Theam_1474 PF07992 Pyridine nucleotide-disulphide oxidoreductase Theam_1475 PF00085 Thioredoxin Theam_1476 PF01022 Bacterial regulatory protein, arsR family Theam_1477 PF01875 Memo-like protein Theam_1478 PF02261 Aspartate decarboxylase Theam_1479 PF01658 Myo-inositol-1-phosphate synthase Theam_1481 PF13525 Outer membrane lipoprotein Theam_1482 PF03060 Nitronate monooxygenase Theam_1483 PF04463 Theam_1483 Theam_1484 PF00675 Insulinase (Peptidase family M16) Theam_1484 PF05193 Peptidase M16 inactive domain Theam_1485 PF00551 Formyl transferase Theam_1486 PF00586 AIR synthase related protein, N-terminal domain Theam_1486 PF02769 AIR synthase related protein, C-terminal domain Theam_1487 PF01336 OB-fold nucleic acid binding domain Theam_1487 PF01966 HD domain Theam_1488 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_1489 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_1490 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains Theam_1490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Theam_1491 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Theam_1492 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Theam_1493 PF12838 4Fe-4S dicluster domain Theam_1494 PF00146 NADH dehydrogenase Theam_1495 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Theam_1496 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Theam_1497 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Theam_1498 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Theam_1499 PF00005 ABC transporter Theam_1500 PF00528 Binding-protein-dependent transport system inner membrane component Theam_1501 PF00528 Binding-protein-dependent transport system inner membrane component Theam_1502 PF01336 OB-fold nucleic acid binding domain Theam_1502 PF02811 PHP domain Theam_1502 PF07733 Bacterial DNA polymerase III alpha subunit Theam_1502 PF14579 Helix-hairpin-helix motif Theam_1503 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Theam_1504 PF01966 HD domain Theam_1505 PF00270 DEAD/DEAH box helicase Theam_1505 PF00271 Helicase conserved C-terminal domain Theam_1506 PF00313 'Cold-shock' DNA-binding domain Theam_1507 PF14229 Theam_1507 Theam_1509 PF01142 tRNA pseudouridine synthase D (TruD) Theam_1510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Theam_1510 PF01842 ACT domain Theam_1510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Theam_1511 PF05491 Holliday junction DNA helicase ruvB C-terminus Theam_1511 PF05496 Holliday junction DNA helicase ruvB N-terminus Theam_1512 PF01330 RuvA N terminal domain Theam_1512 PF07499 RuvA, C-terminal domain Theam_1512 PF14520 Helix-hairpin-helix domain Theam_1514 PF04612 Type II secretion system (T2SS), protein M Theam_1516 PF03934 Type II secretion system (T2SS), protein K Theam_1517 PF01008 Initiation factor 2 subunit family Theam_1518 PF00582 Universal stress protein family Theam_1519 PF03819 MazG nucleotide pyrophosphohydrolase domain Theam_1520 PF01406 tRNA synthetases class I (C) catalytic domain Theam_1520 PF09190 DALR domain Theam_1522 PF00005 ABC transporter Theam_1523 PF02361 Cobalt transport protein Theam_1525 PF01891 Cobalt uptake substrate-specific transmembrane region Theam_1526 PF10670 Theam_1526 Theam_1527 PF04966 Carbohydrate-selective porin, OprB family Theam_1529 PF04055 Radical SAM superfamily Theam_1529 PF13353 4Fe-4S single cluster domain Theam_1530 PF01142 tRNA pseudouridine synthase D (TruD) Theam_1531 PF08245 Mur ligase middle domain Theam_1533 PF09827 CRISPR associated protein Cas2 Theam_1534 PF09827 CRISPR associated protein Cas2 Theam_1535 PF09827 CRISPR associated protein Cas2 Theam_1536 PF01867 CRISPR associated protein Cas1 Theam_1538 PF04608 Phosphatidylglycerophosphatase A Theam_1539 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain Theam_1539 PF02785 Biotin carboxylase C-terminal domain Theam_1539 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Theam_1540 PF00364 Biotin-requiring enzyme Theam_1540 PF00682 HMGL-like Theam_1540 PF02436 Conserved carboxylase domain Theam_1542 PF01078 Magnesium chelatase, subunit ChlI Theam_1542 PF13335 Theam_1542 Theam_1542 PF13541 Subunit ChlI of Mg-chelatase Theam_1544 PF01264 Chorismate synthase Theam_1545 PF01245 Ribosomal protein L19 Theam_1546 PF01351 Ribonuclease HII Theam_1548 PF00009 Elongation factor Tu GTP binding domain Theam_1548 PF03144 Elongation factor Tu domain 2 Theam_1548 PF04760 Translation initiation factor IF-2, N-terminal region Theam_1548 PF11987 Translation-initiation factor 2 Theam_1550 PF00294 pfkB family carbohydrate kinase Theam_1551 PF00990 GGDEF domain Theam_1552 PF00268 Ribonucleotide reductase, small chain Theam_1554 PF00317 Ribonucleotide reductase, all-alpha domain Theam_1554 PF02867 Ribonucleotide reductase, barrel domain Theam_1554 PF03477 ATP cone domain Theam_1555 PF08534 Redoxin Theam_1556 PF04445 Putative SAM-dependent methyltransferase Theam_1557 PF14542 GCN5-related N-acetyl-transferase Theam_1559 PF00753 Metallo-beta-lactamase superfamily Theam_1560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Theam_1561 PF01717 Cobalamin-independent synthase, Catalytic domain Theam_1561 PF08267 Cobalamin-independent synthase, N-terminal domain Theam_1562 PF04055 Radical SAM superfamily Theam_1562 PF13353 4Fe-4S single cluster domain Theam_1564 PF03734 L,D-transpeptidase catalytic domain Theam_1565 PF17033 Theam_1565 Theam_1566 PF03061 Thioesterase superfamily Theam_1567 PF02142 MGS-like domain Theam_1567 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Theam_1567 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Theam_1568 PF13238 AAA domain Theam_1569 PF01029 NusB family Theam_1569 PF01189 NOL1/NOP2/sun family Theam_1569 PF17125 Theam_1569 Theam_1570 PF08668 HDOD domain Theam_1571 PF08668 HDOD domain Theam_1572 PF01142 tRNA pseudouridine synthase D (TruD) Theam_1573 PF13242 HAD-hyrolase-like Theam_1575 PF01551 Peptidase family M23 Theam_1576 PF00194 Eukaryotic-type carbonic anhydrase Theam_1577 PF01979 Amidohydrolase family Theam_1577 PF13382 Adenine deaminase C-terminal domain Theam_1578 PF00623 RNA polymerase Rpb1, domain 2 Theam_1578 PF04983 RNA polymerase Rpb1, domain 3 Theam_1578 PF04997 RNA polymerase Rpb1, domain 1 Theam_1578 PF04998 RNA polymerase Rpb1, domain 5 Theam_1578 PF05000 RNA polymerase Rpb1, domain 4 Theam_1579 PF00562 RNA polymerase Rpb2, domain 6 Theam_1579 PF04560 RNA polymerase Rpb2, domain 7 Theam_1579 PF04561 RNA polymerase Rpb2, domain 2 Theam_1579 PF04563 RNA polymerase beta subunit Theam_1579 PF04565 RNA polymerase Rpb2, domain 3 Theam_1579 PF10385 RNA polymerase beta subunit external 1 domain Theam_1580 PF00542 Ribosomal protein L7/L12 C-terminal domain Theam_1580 PF16320 Theam_1580 Theam_1581 PF00466 Ribosomal protein L10 Theam_1582 PF00687 Ribosomal protein L1p/L10e family Theam_1583 PF00298 Ribosomal protein L11, RNA binding domain Theam_1583 PF03946 Ribosomal protein L11, N-terminal domain Theam_1584 PF00467 KOW motif Theam_1584 PF02357 Transcription termination factor nusG Theam_1584 PF07009 Protein of unknown function (DUF1312) Theam_1585 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Theam_1586 PF00471 Ribosomal protein L33 Theam_1587 PF00009 Elongation factor Tu GTP binding domain Theam_1587 PF03143 Elongation factor Tu C-terminal domain Theam_1587 PF03144 Elongation factor Tu domain 2 Theam_1588 PF13372 Alginate export Theam_1590 PF01782 RimM N-terminal domain Theam_1590 PF05239 PRC-barrel domain Theam_1591 PF01746 tRNA (Guanine-1)-methyltransferase Theam_1593 PF09723 Theam_1593 Theam_1594 PF00210 Ferritin-like domain Theam_1595 PF01966 HD domain Theam_1596 PF00800 Prephenate dehydratase Theam_1596 PF01817 Chorismate mutase type II Theam_1596 PF01842 ACT domain Theam_1598 PF00475 Imidazoleglycerol-phosphate dehydratase Theam_1599 PF01909 Nucleotidyltransferase domain Theam_1600 PF00202 Aminotransferase class-III Theam_1601 PF09335 Theam_1601 Theam_1603 PF09527 Theam_1603 Theam_1605 PF00119 ATP synthase A chain Theam_1606 PF00137 ATP synthase subunit C Theam_1608 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Theam_1609 PF02577 Bifunctional nuclease Theam_1610 PF00919 Uncharacterized protein family UPF0004 Theam_1610 PF01938 TRAM domain Theam_1610 PF04055 Radical SAM superfamily Theam_1611 PF00691 OmpA family Theam_1611 PF13441 Theam_1611 Theam_1612 PF00171 Aldehyde dehydrogenase family Theam_1614 PF01881 CRISPR associated protein Cas6 Theam_1617 PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 Theam_1618 PF09704 CRISPR-associated protein (Cas_Cas5) Theam_1619 PF00270 DEAD/DEAH box helicase Theam_1619 PF00271 Helicase conserved C-terminal domain Theam_1619 PF01966 HD domain Theam_1620 PF01930 Domain of unknown function DUF83 Theam_1622 PF09827 CRISPR associated protein Cas2 Theam_1623 PF01881 CRISPR associated protein Cas6 Theam_1625 PF00005 ABC transporter Theam_1626 PF01323 DSBA-like thioredoxin domain Theam_1627 PF00391 PEP-utilising enzyme, mobile domain Theam_1627 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Theam_1627 PF02896 PEP-utilising enzyme, TIM barrel domain Theam_1628 PF02092 Theam_1628 Theam_1628 PF05746 DALR anticodon binding domain Theam_1629 PF02091 Glycyl-tRNA synthetase alpha subunit Theam_1630 PF03259 Roadblock/LC7 domain Theam_1632 PF06508 Queuosine biosynthesis protein QueC Theam_1634 PF00919 Uncharacterized protein family UPF0004 Theam_1634 PF04055 Radical SAM superfamily Theam_1635 PF01837 Theam_1635 Theam_1638 PF00288 GHMP kinases N terminal domain Theam_1638 PF08544 GHMP kinases C terminal Theam_1639 PF01522 Polysaccharide deacetylase Theam_1640 PF00535 Glycosyl transferase family 2 Theam_1641 PF00534 Glycosyl transferases group 1 Theam_1646 PF03544 Gram-negative bacterial TonB protein C-terminal Theam_1647 PF01425 Amidase Theam_1648 PF02686 Glu-tRNAGln amidotransferase C subunit Theam_1651 PF03652 Uncharacterised protein family (UPF0081) Theam_1655 PF03054 tRNA methyl transferase Theam_1656 PF00430 ATP synthase B/B' CF(0) Theam_1657 PF00430 ATP synthase B/B' CF(0) Theam_1658 PF00213 ATP synthase delta (OSCP) subunit Theam_1659 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theam_1659 PF00306 ATP synthase alpha/beta chain, C terminal domain Theam_1659 PF02874 ATP synthase alpha/beta family, beta-barrel domain Theam_1660 PF00231 ATP synthase Theam_1661 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Theam_1661 PF02874 ATP synthase alpha/beta family, beta-barrel domain Theam_1662 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Theam_1664 PF13520 Amino acid permease Theam_1665 PF13103 TonB C terminal Theam_1666 PF04028 Theam_1666 Theam_1667 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase Theam_1668 PF01134 Glucose inhibited division protein A Theam_1668 PF13932 GidA associated domain 3 Theam_1669 PF02527 rRNA small subunit methyltransferase G Theam_1670 PF03537 Glycoside-hydrolase family GH114 Theam_1671 PF01381 Helix-turn-helix Theam_1672 PF00288 GHMP kinases N terminal domain Theam_1672 PF08544 GHMP kinases C terminal Theam_1675 PF06094 AIG2-like family Theam_1676 PF00133 tRNA synthetases class I (I, L, M and V) Theam_1676 PF08264 Anticodon-binding domain of tRNA Theam_1676 PF10458 Valyl tRNA synthetase tRNA binding arm Theam_1677 PF14437 Theam_1677 Theam_1678 PF00154 recA bacterial DNA recombination protein Theam_1679 PF00437 Type II/IV secretion system protein Theam_1680 PF02631 RecX family Theam_1681 PF01471 Putative peptidoglycan binding domain Theam_1682 PF01411 tRNA synthetases class II (A) Theam_1682 PF02272 DHHA1 domain Theam_1682 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Theam_1685 PF13145 PPIC-type PPIASE domain Theam_1686 PF00294 pfkB family carbohydrate kinase Theam_1687 PF04296 Protein of unknown function (DUF448) Theam_1688 PF00575 S1 RNA binding domain Theam_1688 PF08529 NusA N-terminal domain Theam_1688 PF13184 NusA-like KH domain Theam_1689 PF02576 Uncharacterised BCR, YhbC family COG0779 Theam_1689 PF17384 Theam_1689 Theam_1690 PF01668 SmpB protein Theam_1691 PF00575 S1 RNA binding domain Theam_1692 PF02401 LytB protein Theam_1693 PF01553 Acyltransferase Theam_1694 PF07642 Theam_1694 Theam_1695 PF00909 Ammonium Transporter Family Theam_1696 PF01795 MraW methylase family Theam_1697 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Theam_1697 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Theam_1699 PF07963 Prokaryotic N-terminal methylation motif Theam_1700 PF09171 Domain of unknown function (DUF1886) Theam_1701 PF13181 Tetratricopeptide repeat Theam_1702 PF04055 Radical SAM superfamily Theam_1704 PF06803 Theam_1704 Theam_1705 PF01396 Theam_1705 Theam_1710 PF13280 Theam_1710 Theam_1711 PF04973 Theam_1711 Theam_1712 PF01975 Survival protein SurE Theam_1713 PF09335 Theam_1713 Theam_1714 PF00037 4Fe-4S binding domain Theam_1714 PF12838 4Fe-4S dicluster domain Theam_1716 PF02163 Peptidase family M50 Theam_1716 PF13180 PDZ domain Theam_1717 PF01479 S4 domain Theam_1717 PF01728 FtsJ-like methyltransferase Theam_1718 PF03259 Roadblock/LC7 domain Theam_1721 PF09171 Domain of unknown function (DUF1886) Theam_1722 PF09835 Theam_1722 Theam_1723 PF00830 Ribosomal L28 family Theam_1724 PF00578 AhpC/TSA family Theam_1725 PF00218 Indole-3-glycerol phosphate synthase Theam_1726 PF00483 Nucleotidyl transferase Theam_1726 PF14602 Hexapeptide repeat of succinyl-transferase Theam_1727 PF00293 NUDIX domain Theam_1728 PF11306 Protein of unknown function (DUF3108) Theam_1729 PF02547 Queuosine biosynthesis protein Theam_1734 PF01935 Domain of unknown function DUF87 Theam_1734 PF11130 Theam_1734 Theam_1736 PF01479 S4 domain Theam_1745 PF00990 GGDEF domain Theam_1746 PF00563 EAL domain Theam_1747 PF12696 TraM recognition site of TraD and TraG Theam_1748 PF01131 DNA topoisomerase Theam_1748 PF01751 Toprim domain Theam_1755 PF06834 Theam_1755 Theam_1762 PF02163 Peptidase family M50 Theam_1762 PF13180 PDZ domain Theam_1763 PF00589 Phage integrase family Theam_1767 PF07505 Theam_1767 Theam_1771 PF07728 AAA domain (dynein-related subfamily) Theam_1779 PF10130 Theam_1779 Theam_1782 PF01966 HD domain Theam_1786 PF03743 Bacterial conjugation TrbI-like protein Theam_1787 PF06586 Theam_1787 Theam_1790 PF00263 Theam_1790 Theam_1790 PF07655 Theam_1790 Theam_1795 PF03415 Clostripain family Theam_1799 PF00437 Type II/IV secretion system protein Theam_1800 PF00482 Type II secretion system (T2SS), protein F Theam_1801 PF07963 Prokaryotic N-terminal methylation motif Theam_1801 PF08334 Type II secretion system (T2SS), protein G Theam_1802 PF07963 Prokaryotic N-terminal methylation motif Theam_1803 PF07963 Prokaryotic N-terminal methylation motif Theam_1804 PF00437 Type II/IV secretion system protein Theam_1809 PF13098 Thioredoxin-like domain Theam_1810 PF01022 Bacterial regulatory protein, arsR family Theam_1812 PF00004 ATPase family associated with various cellular activities (AAA) Theam_1815 PF11211 Theam_1815 Theam_1825 PF07728 AAA domain (dynein-related subfamily) Theam_1825 PF08406 Theam_1825 Theam_1830 PF04098 Rad52/22 family double-strand break repair protein Theam_1831 PF00436 Single-strand binding protein family