locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Theam_0001 Theam_0001 Theam_0001 45 1523 + anthranilate synthase component I TIGRFAM: anthranilate synthase component I~KEGG: aae:aq_582 anthranilate synthase component I~PFAM: Chorismate binding-like%3B Anthranilate synthase component I domain protein gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0001 Theam_0002 Theam_0002 Theam_0002 1554 3008 + replicative DNA helicase TIGRFAM: replicative DNA helicase~PFAM: DnaB domain protein helicase domain protein~KEGG: pmx:PERMA_1295 replicative DNA helicase~SMART: AAA ATPase gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0002 Theam_0003 Theam_0003 Theam_0003 3005 3817 - hypothetical protein KEGG: hoh:Hoch_5053 hypothetical protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0003 Theam_0004 Theam_0004 Theam_0004 3840 5546 - prolyl-tRNA synthetase KEGG: sat:SYN_00905 prolyl-tRNA synthetase~TIGRFAM: prolyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B YbaK/prolyl-tRNA synthetase associated region%3B Anticodon-binding domain protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0004 Theam_0005 Theam_0005 Theam_0005 5589 6659 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: mca:MCA2126 glycosyl transferase%2C group 1 family protein gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0005 Theam_0006 Theam_0006 Theam_0006 6652 8067 + chromosomal replication initiator protein DnaA TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication initiator DnaA%3B Chromosomal replication initiator DnaA domain~KEGG: cno:NT01CX_0867 chromosomal replication initiation protein~SMART: Chromosomal replication initiator DnaA domain%3B AAA ATPase gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0006 Theam_0007 Theam_0007 Theam_0007 8315 9409 + DNA polymerase III%2C beta subunit SMART: DNA polymerase III beta chain~TIGRFAM: DNA polymerase III%2C beta subunit~KEGG: pmx:PERMA_1539 DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta chain gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0007 Theam_0008 Theam_0008 Theam_0008 9409 9930 + CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase KEGG: hoh:Hoch_4511 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase~TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase~PFAM: CDP-alcohol phosphatidyltransferase gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0008 Theam_0009 Theam_0009 Theam_0009 9927 10505 + protein of unknown function DUF205 PFAM: protein of unknown function DUF205~KEGG: hmo:HM1_1986 membrane protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0009 Theam_0010 Theam_0010 Theam_0010 10515 11399 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: gbm:Gbem_1257 Polyprenyl synthetase gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0010 Theam_0011 Theam_0011 Theam_0011 11485 13338 + deoxyxylulose-5-phosphate synthase KEGG: aae:aq_881 1-deoxy-D-xylulose-5-phosphate synthase~TIGRFAM: deoxyxylulose-5-phosphate synthase~PFAM: Transketolase central region%3B Transketolase domain-containing protein gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0011 Theam_0012 Theam_0012 Theam_0012 13420 14439 + hypothetical protein KEGG: ttu:TERTU_2803 putative lipoprotein gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0012 Theam_0013 Theam_0013 Theam_0013 14651 15214 + hypothetical protein KEGG: afn:Acfer_0589 hypothetical protein gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0013 Theam_0014 Theam_0014 Theam_0014 15221 15997 + Domain of unknown function DUF1828 PFAM: Domain of unknown function DUF1828%3B Domain of unknown function DUF1829~KEGG: afn:Acfer_0590 hypothetical protein gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0014 Theam_0015 Theam_0015 Theam_0015 16338 18758 - hypothetical protein KEGG: nmi:NMO_0803 putative phage tail protein gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0015 Theam_0016 Theam_0016 Theam_0016 18745 19104 - NLP/P60 protein PFAM: NLP/P60 protein~KEGG: sfr:Sfri_3992 NLP/P60 protein gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0016 Theam_0017 Theam_0017 Theam_0017 19101 19700 - phage-related protein KEGG: sfu:Sfum_1891 phage-related protein-like gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0017 Theam_0018 Theam_0018 Theam_0018 19697 20035 - hypothetical protein KEGG: dvm:DvMF_1642 hypothetical protein gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0018 Theam_0019 Theam_0019 Theam_0019 20322 21914 - hypothetical protein KEGG: hth:HTH_0879 hypothetical protein gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0019 Theam_0020 Theam_0020 Theam_0020 21911 23233 - hypothetical protein KEGG: hth:HTH_0881 hypothetical protein gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0020 Theam_0021 Theam_0021 Theam_0021 23236 23637 - hypothetical protein KEGG: bfu:BC1G_12613 hypothetical protein gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0021 Theam_0022 Theam_0022 Theam_0022 23637 23990 - hypothetical protein KEGG: lpc:LPC_2185 hypothetical protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0022 Theam_0023 Theam_0023 Theam_0023 23990 24448 - hypothetical protein KEGG: hth:HTH_0916 bacteriophage TP901-1 ORF40-like protein gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0023 Theam_0024 Theam_0024 Theam_0024 24435 24641 - hypothetical protein KEGG: ppd:Ppro_0741 radical SAM domain-containing protein gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0024 Theam_0025 Theam_0025 Theam_0025 24653 25774 - phage protein KEGG: bce:BC1894 phage protein gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0025 Theam_0026 Theam_0026 Theam_0026 25774 26379 - hypothetical protein KEGG: hth:HTH_0913 hypothetical protein gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0026 Theam_0027 Theam_0027 Theam_0027 26448 26747 - hypothetical protein KEGG: aau:AAur_3179 excisionase family protein gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0027 Theam_0028 Theam_0028 Theam_0028 26773 27417 - hypothetical protein KEGG: pmx:PERMA_1790 hypothetical protein gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0028 Theam_0029 Theam_0029 Theam_0029 27426 27932 - hypothetical protein KEGG: hth:HTH_0908 hypothetical protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0029 Theam_0030 Theam_0030 Theam_0030 27922 28482 - hypothetical protein KEGG: pmx:PERMA_1792 hypothetical protein gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0030 Theam_0031 Theam_0031 Theam_0031 28479 29198 - hypothetical protein KEGG: hth:HTH_0906 hypothetical protein gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0031 Theam_0032 Theam_0032 Theam_0032 29212 30618 - Integrase catalytic region protein PFAM: Integrase catalytic region~KEGG: pmx:PERMA_1794 integrase core domain protein gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0032 Theam_0033 Theam_0033 Theam_0033 30622 31899 - ParB domain protein nuclease SMART: ParB domain protein nuclease~KEGG: pmx:PERMA_1795 hypothetical protein gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0033 Theam_0034 Theam_0034 Theam_0034 31971 32369 + hypothetical protein KEGG: lif:LinJ32.0870 OSM3-like kinesin gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0034 Theam_0035 Theam_0035 Theam_0035 32311 32637 - hypothetical protein KEGG: ccv:CCV52592_0365 Xaa-Pro peptidase gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0035 Theam_0036 Theam_0036 Theam_0036 32651 33028 - hypothetical protein KEGG: plu:plu3450 hypothetical protein gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0036 Theam_0037 Theam_0037 Theam_0037 33038 33799 - hypothetical protein KEGG: pmx:PERMA_1785 hypothetical protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0037 Theam_0038 Theam_0038 Theam_0038 33799 34092 - histone family protein DNA-binding protein KEGG: glo:Glov_1918 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0038 Theam_0039 Theam_0039 Theam_0039 34105 34323 - hypothetical protein KEGG: ote:Oter_1481 peptidylprolyl isomerase FKBP-type gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0039 Theam_0040 Theam_0040 Theam_0040 34434 34589 - hypothetical protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0040 Theam_0041 Theam_0041 Theam_0041 34589 34849 - hypothetical protein KEGG: mth:MTH421 hypothetical protein gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0041 Theam_0042 Theam_0042 Theam_0042 34884 35069 - hypothetical protein KEGG: dpe:Dper_GL18894 GL18894 gene product from transcript GL18894-RA gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0042 Theam_0043 Theam_0043 Theam_0043 35133 35435 - hypothetical protein KEGG: spu:760031 hypothetical protein LOC760031 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0043 Theam_0044 Theam_0044 Theam_0044 35435 35932 - hypothetical protein KEGG: dsa:Desal_1649 transcriptional regulator CII%2C putative gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0044 Theam_0045 Theam_0045 Theam_0045 36050 36298 + hypothetical protein KEGG: cdu:CD36_23250 acyltransferase%2C putative gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0045 Theam_0046 Theam_0046 Theam_0046 36204 36401 - hypothetical protein KEGG: scl:sce9219 general secretion pahtway protein D gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0046 Theam_0047 Theam_0047 Theam_0047 36398 36637 - hypothetical protein KEGG: cyt:cce_0601 group 2 sigma-70 RNA polymerase sigma factor E gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0047 Theam_0048 Theam_0048 Theam_0048 36784 37452 + transcriptional regulator%2C XRE family KEGG: hth:HTH_0897 putative prophage repressor~PFAM: Peptidase S24/S26A/S26B%2C conserved region%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0048 Theam_0049 Theam_0049 Theam_0049 37469 38533 + hypothetical protein KEGG: cja:CJA_2480 endo-1%2C4-beta mannanase%2C man26B gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0049 Theam_0050 Theam_0050 Theam_0050 38588 39484 + hypothetical protein KEGG: tmz:Tmz1t_0115 hypothetical protein gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0050 Theam_0051 Theam_0051 Theam_0051 39558 40466 + hypothetical protein KEGG: sfu:Sfum_1886 hypothetical protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0051 Theam_0052 Theam_0052 Theam_0052 40476 40979 + Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: dvu:DVU2165 lysozyme%2C putative gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0052 Theam_0053 Theam_0053 Theam_0053 40979 41419 + hypothetical protein KEGG: nhl:Nhal_0998 hypothetical protein gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0053 Theam_0054 Theam_0054 Theam_0054 41416 41697 + Resolvase%2C Holliday junction-type PFAM: Resolvase%2C Holliday junction-type~KEGG: pmx:PERMA_1811 holliday junction resolvase Hjc gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0054 Theam_0055 Theam_0055 Theam_0055 41687 42106 + hypothetical protein KEGG: pho:PH0929 chromosome segregation protein gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0055 Theam_0056 Theam_0056 Theam_0056 42085 42375 + hypothetical protein KEGG: hth:HTH_0884 hypothetical protein gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0056 Theam_0057 Theam_0057 Theam_0057 42375 42869 + hypothetical protein KEGG: eca:ECA3718 phage-like protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0057 Theam_0058 Theam_0058 Theam_0058 42871 44130 + protein of unknown function DUF264 KEGG: msv:Mesil_1911 protein of unknown function DUF264 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0058 Theam_0059 Theam_0059 Theam_0059 44141 44449 + hypothetical protein KEGG: vha:VIBHAR_00812 Dna-J like membrane chaperone protein gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0059 Theam_0060 Theam_0060 Theam_0060 44745 47786 + hypothetical protein KEGG: dvu:DVU2157 tail tape measure protein%2C putative gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0060 Theam_0061 Theam_0061 Theam_0061 47856 48239 + hypothetical protein KEGG: gka:GK0543 hypothetical protein gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0061 Theam_0062 Theam_0062 Theam_0062 48241 49149 + hypothetical protein KEGG: pmx:PERMA_1823 hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0062 Theam_0063 Theam_0063 Theam_0063 49162 49695 + hypothetical protein KEGG: bbo:BBOV_III009970 hypothetical protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0063 Theam_0064 Theam_0064 Theam_0064 49688 50215 + hypothetical protein KEGG: rsc:RCFBP_11741 conserved phage protein of unknown function gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0064 Theam_0065 Theam_0065 Theam_0065 50747 53857 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: dae:Dtox_0522 acriflavin resistance protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0065 Theam_0066 Theam_0066 Theam_0066 53850 55034 - efflux transporter%2C RND family%2C MFP subunit KEGG: pmx:PERMA_1543 putative efflux transporter%2C RND family%2C MFP subunit~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0066 Theam_0067 Theam_0067 Theam_0067 55024 56301 - outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: pmx:PERMA_1544 outer membrane efflux protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0067 Theam_0068 Theam_0068 Theam_0068 56430 57161 + protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: dps:DP2513 hypothetical protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0068 Theam_0069 Theam_0069 Theam_0069 57173 57553 + Rhodanese domain protein SMART: Rhodanese domain protein~KEGG: dps:DP1064 hypothetical protein gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0069 Theam_0070 Theam_0070 Theam_0070 57555 57932 + regulatory protein ArsR KEGG: cts:Ctha_1194 transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0070 Theam_0071 Theam_0071 Theam_0071 57913 58581 + carbonic anhydrase PFAM: carbonic anhydrase~KEGG: swo:Swol_2452 carbonic anhydrase-like protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0071 Theam_0072 Theam_0072 Theam_0072 58585 59622 - hypothetical protein KEGG: tye:THEYE_A0066 hypothetical protein gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0072 Theam_0073 Theam_0073 Theam_0073 59686 60540 - methylthioadenosine phosphorylase KEGG: pca:Pcar_2021 methylthioadenosine phosphorylase~TIGRFAM: methylthioadenosine phosphorylase~PFAM: purine or other phosphorylase family 1 gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0073 Theam_0074 Theam_0074 Theam_0074 60542 60838 - hypothetical protein KEGG: nam:NAMH_0283 hypothetical protein gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0074 Theam_0075 Theam_0075 Theam_0075 60882 61640 - imidazoleglycerol phosphate synthase%2C cyclase subunit KEGG: pmx:PERMA_0864 imidazole glycerol phosphate synthase subunit HisF~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit~PFAM: histidine biosynthesis protein gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0075 Theam_0076 Theam_0076 Theam_0076 61709 63019 - thiamine biosynthesis protein ThiC KEGG: mta:Moth_1401 thiamine biosynthesis protein ThiC~TIGRFAM: thiamine biosynthesis protein ThiC~PFAM: thiamine biosynthesis protein ThiC gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0076 Theam_0077 Theam_0077 Theam_0077 63019 63825 - thiazole biosynthesis enzyme TIGRFAM: thiazole biosynthesis enzyme~KEGG: tjr:TherJR_1442 thiazole biosynthesis enzyme gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0077 Theam_0078 Theam_0078 Theam_0078 64095 65390 - hypothetical protein KEGG: dha:DEHA2C08778g DEHA2C08778p gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0078 Theam_0079 Theam_0079 Theam_0079 65448 66668 - amidohydrolase TIGRFAM: amidohydrolase~KEGG: pmx:PERMA_0047 thermostable carboxypeptidase 1~PFAM: peptidase M20%3B peptidase dimerisation domain protein gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0079 Theam_0080 Theam_0080 Theam_0080 66740 67333 + orotate phosphoribosyltransferase TIGRFAM: orotate phosphoribosyltransferase~KEGG: tna:CTN_0337 orotate phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0080 Theam_0081 Theam_0081 Theam_0081 67338 68312 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: pmx:PERMA_1511 octaprenyl-diphosphate synthase gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0081 Theam_0082 Theam_0082 Theam_0082 68290 68700 - nucleotidyltransferase substrate binding protein%2C HI0074 family KEGG: hya:HY04AAS1_1590 nucleotidyltransferase substrate binding protein%2C HI0074 family~TIGRFAM: nucleotidyltransferase substrate binding protein%2C HI0074 family~PFAM: Nucleotidyltransferase substrate binding protein HI0074 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0082 Theam_0083 Theam_0083 Theam_0083 68658 69023 - DNA polymerase beta domain protein region protein PFAM: DNA polymerase beta domain protein region~KEGG: aae:aq_507 hypothetical protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0083 Theam_0084 Theam_0084 Theam_0084 68975 69949 - NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: sul:SYO3AOP1_0164 NAD-dependent epimerase/dehydratase gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0084 Theam_0085 Theam_0085 Theam_0085 70022 73537 + chromosome segregation protein SMC KEGG: cno:NT01CX_2216 chromosome segregation protein SMC~TIGRFAM: chromosome segregation protein SMC~PFAM: SMC domain protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0085 Theam_0086 Theam_0086 Theam_0086 74063 74611 - putative lipoprotein KEGG: dvl:Dvul_1060 putative lipoprotein gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0086 Theam_0087 Theam_0087 Theam_0087 74816 74992 - 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: tmt:Tmath_0913 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0087 Theam_0088 Theam_0088 Theam_0088 75005 75562 - ribosome recycling factor KEGG: pmx:PERMA_0234 ribosome recycling factor~TIGRFAM: ribosome recycling factor~PFAM: ribosome recycling factor gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0088 Theam_0089 Theam_0089 Theam_0089 75559 76281 - uridylate kinase KEGG: pca:Pcar_1919 uridylate kinase~TIGRFAM: uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0089 Theam_0090 Theam_0090 Theam_0090 76347 76943 - translation elongation factor Ts KEGG: pmx:PERMA_0232 elongation factor Ts~TIGRFAM: translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B dimerisation%3B ubiquitin-associated- domain-containing protein gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0090 Theam_0091 Theam_0091 Theam_0091 76995 77858 - ribosomal protein S2 KEGG: gct:GC56T3_2304 ribosomal protein S2~TIGRFAM: ribosomal protein S2~PFAM: ribosomal protein S2 gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0091 Theam_0092 Theam_0092 Theam_0092 78000 79556 - 5-oxoprolinase (ATP-hydrolyzing) KEGG: pmx:PERMA_1470 5-oxoprolinase (5-oxo-L-prolinase) (pyroglutamase) (5-OPase)~PFAM: Hydantoinase B/oxoprolinase gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0092 Theam_0093 Theam_0093 Theam_0093 79549 81519 - 5-oxoprolinase (ATP-hydrolyzing) KEGG: aae:aq_708 N-methylhydantoinase A~PFAM: Hydantoinase/oxoprolinase%3B Hydantoinaseoxoprolinase domain protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0093 Theam_0094 Theam_0094 Theam_0094 81583 82245 + ubiquinone/menaquinone biosynthesis methyltransferase KEGG: fps:FP0327 ubiquinone/menaquinone biosynthesis methyltransferase UbiE~TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: Methyltransferase type 11 gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0094 Theam_0095 Theam_0095 Theam_0095 82313 83539 + hypothetical protein KEGG: dak:DaAHT2_2118 hypothetical protein gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0095 Theam_0096 Theam_0096 Theam_0096 83559 84347 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: vsp:VS_0525 hypothetical protein gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0096 Theam_0097 Theam_0097 Theam_0097 84380 84697 - CutA1 divalent ion tolerance protein PFAM: CutA1 divalent ion tolerance protein~KEGG: reh:H16_A3456 periplasmic divalent cation tolerance protein CutA gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0097 Theam_0098 Theam_0098 Theam_0098 84810 85655 + apurinic endonuclease Apn1 SMART: AP endonuclease family 2~TIGRFAM: apurinic endonuclease Apn1~KEGG: nis:NIS_0286 endonuclease IV~PFAM: Xylose isomerase domain-containing protein TIM barrel gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0098 Theam_0099 Theam_0099 Theam_0099 85694 86356 + phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: dau:Daud_2224 phosphoribosyltransferase gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0099 Theam_0100 Theam_0100 Theam_0100 86371 86733 - hypothetical protein KEGG: dhd:Dhaf_2737 protein of unknown function DUF1333 gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0100 Theam_0101 Theam_0101 Theam_0101 86882 87304 + hypothetical protein KEGG: rec:RHECIAT_CH0000256 probable amino acid efflux protein%2C LysE family gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0101 Theam_0102 Theam_0102 Theam_0102 87297 87896 + hypothetical protein KEGG: fra:Francci3_2982 acyl-CoA synthetase gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0102 Theam_0103 Theam_0103 Theam_0103 87897 88226 + hypothetical protein KEGG: gme:Gmet_2454 histidine kinase gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0103 Theam_0104 Theam_0104 Theam_0104 88236 89081 + beta-lactamase domain protein KEGG: dak:DaAHT2_0927 beta-lactamase domain protein gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0104 Theam_0105 Theam_0105 Theam_0105 89084 89458 + Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: rrs:RoseRS_3912 roadblock/LC7 family protein gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0105 Theam_0106 Theam_0106 Theam_0106 89455 90726 - pyrimidine-nucleoside phosphorylase TIGRFAM: pyrimidine-nucleoside phosphorylase~KEGG: tma:TM1653 pyrimidine-nucleoside phosphorylase~PFAM: Pyrimidine nucleoside phosphorylase domain%3B Glycosyl transferase%2C family 3-like%3B glycosyl transferase family 3 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0106 Theam_0107 Theam_0107 Theam_0107 90740 91366 - peptidase M50 PFAM: peptidase M50~KEGG: swo:Swol_1419 peptidase M50 gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0107 Theam_0108 Theam_0108 Theam_0108 91379 91984 - AMMECR1 domain protein PFAM: AMMECR1 domain protein~KEGG: tga:TGAM_1450 hypothetical protein gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0108 Theam_0109 Theam_0109 Theam_0109 92048 92422 - CrcB protein KEGG: nis:NIS_1374 camphor resistance protein CrcB~TIGRFAM: CrcB protein~PFAM: Camphor resistance CrcB protein gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0109 Theam_0110 Theam_0110 Theam_0110 92419 93564 - ATP-cone domain protein PFAM: ATP-cone domain protein~KEGG: msv:Mesil_1353 ATP-cone domain protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0110 Theam_0111 Theam_0111 Theam_0111 93542 94564 - aminodeoxychorismate lyase PFAM: aminodeoxychorismate lyase~KEGG: tal:Thal_0148 aminodeoxychorismate lyase gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0111 Theam_0112 Theam_0112 Theam_0112 94566 95144 - CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: pmx:PERMA_0500 CDP-alcohol phosphatidyltransferase gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0112 Theam_0113 Theam_0113 Theam_0113 95200 95808 - MglA protein KEGG: gsu:GSU0099 MglA protein gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0113 Theam_0114 Theam_0114 Theam_0114 95845 96441 - hypothetical protein KEGG: taf:THA_92 methyl-accepting chemotaxis protein 4 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0114 Theam_0115 Theam_0115 Theam_0115 96465 96695 - hypothetical protein KEGG: abi:Aboo_0972 hypothetical protein gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0115 Theam_0116 Theam_0116 Theam_0116 96709 97065 - Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: aae:aq_1847 hypothetical protein gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0116 Theam_0117 Theam_0117 Theam_0117 97415 97876 + hypothetical protein KEGG: uma:UM02602.1 hypothetical protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0117 Theam_0118 Theam_0118 Theam_0118 97916 98293 + hypothetical protein KEGG: dsy:DSY2987 hypothetical protein gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0118 Theam_0119 Theam_0119 Theam_0119 98293 99210 + conserved hypothetical protein TIGRFAM: conserved hypothetical protein~PFAM: Radical SAM domain protein~KEGG: aae:aq_632 hypothetical protein~SMART: Elongator protein 3/MiaB/NifB gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0119 Theam_0120 Theam_0120 Theam_0120 99207 99620 - protein of unknown function DUF163 PFAM: protein of unknown function DUF163~KEGG: pmn:PMN2A_0276 hypothetical protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0120 Theam_0121 Theam_0121 Theam_0121 99617 99979 - iojap-like protein KEGG: pph:Ppha_0095 iojap-like protein~TIGRFAM: iojap-like protein~PFAM: Iojap-related protein gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0121 Theam_0122 Theam_0122 Theam_0122 99993 100943 - outer membrane assembly lipoprotein YfiO TIGRFAM: outer membrane assembly lipoprotein YfiO~KEGG: hya:HY04AAS1_1148 putative lipoprotein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0122 Theam_0123 Theam_0123 Theam_0123 100965 102467 - ribonuclease%2C Rne/Rng family KEGG: gsu:GSU3239 ribonuclease G~TIGRFAM: ribonuclease%2C Rne/Rng family~PFAM: RNA-binding protein AU-1/Ribonuclease E/G%3B RNA binding S1 domain protein gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0123 Theam_0124 Theam_0124 Theam_0124 102433 104877 - Protein of unknown function DUF2344 KEGG: gur:Gura_0300 radical SAM domain-containing protein~PFAM: Protein of unknown function DUF2344%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0124 Theam_0125 Theam_0125 Theam_0125 104858 105412 - hypothetical protein KEGG: cat:CA2559_13518 ATPase gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0125 Theam_0126 Theam_0126 Theam_0126 105745 106428 - protein of unknown function DUF481 PFAM: protein of unknown function DUF481~KEGG: pmx:PERMA_1693 hypothetical protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0126 Theam_0127 Theam_0127 Theam_0127 106478 107119 + signal peptidase I TIGRFAM: signal peptidase I~KEGG: pmx:PERMA_0639 signal peptidase I~PFAM: Peptidase S24/S26A/S26B%2C conserved region%3B Peptidase S26%2C conserved region gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0127 Theam_0128 Theam_0128 Theam_0128 107152 107454 + hypothetical protein KEGG: fpl:Ferp_1851 CRISPR-associated protein%2C Csx11 family gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0128 Theam_0129 Theam_0129 Theam_0129 107482 107781 - histone family protein DNA-binding protein KEGG: ate:Athe_0648 histone family protein DNA-binding protein~PFAM: histone family protein DNA-binding protein~SMART: histone family protein DNA-binding protein gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0129 Theam_0130 Theam_0130 Theam_0130 107962 108549 - DivIVA domain protein KEGG: srm:SRM_00869 hypothetical protein~TIGRFAM: DivIVA domain~PFAM: DivIVA family protein gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0130 Theam_0131 Theam_0131 Theam_0131 108553 108795 - protein of unknown function YGGT PFAM: protein of unknown function YGGT~KEGG: afr:AFE_0261 YGGT family protein gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0131 Theam_0132 Theam_0132 Theam_0132 108786 109388 - non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family KEGG: bts:Btus_0641 non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family~TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0132 Theam_0133 Theam_0133 Theam_0133 109385 110089 - ribonuclease PH TIGRFAM: ribonuclease PH~KEGG: tjr:TherJR_2567 ribonuclease PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2 gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0133 Theam_0134 Theam_0134 Theam_0134 110076 110864 - glutamate racemase TIGRFAM: glutamate racemase~KEGG: tye:THEYE_A1384 glutamate racemase~PFAM: Asp/Glu/hydantoin racemase gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0134 Theam_0135 Theam_0135 Theam_0135 110933 113086 + (p)ppGpp synthetase I%2C SpoT/RelA SMART: metal-dependent phosphohydrolase HD region~TIGRFAM: RelA/SpoT family protein~KEGG: pmx:PERMA_0614 GTP pyrophosphokinase~PFAM: RelA/SpoT domain protein%3B metal-dependent phosphohydrolase HD sub domain%3B TGS domain-containing protein%3B amino acid-binding ACT domain protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0135 Theam_0136 Theam_0136 Theam_0136 113150 113752 + ATP-dependent Clp protease%2C proteolytic subunit ClpP TIGRFAM: ATP-dependent Clp protease%2C proteolytic subunit ClpP~KEGG: saf:SULAZ_0379 ATP-dependent Clp protease%2C proteolytic subunit ClpP~PFAM: peptidase S14 ClpP gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0136 Theam_0137 Theam_0137 Theam_0137 113754 115049 + 3%2C4-dihydroxy-2-butanone 4-phosphate synthase KEGG: tal:Thal_0286 3%2C4-dihydroxy-2-butanone 4-phosphate synthase~TIGRFAM: 3%2C4-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II~PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase%3B GTP cyclohydrolase II gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0137 Theam_0138 Theam_0138 Theam_0138 115257 116204 + pseudogene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0138 Theam_0139 Theam_0139 Theam_0139 116389 118377 - diguanylate phosphodiesterase KEGG: nam:NAMH_0815 putative diguanylate cyclase/phosphodiesterase~PFAM: EAL domain protein~SMART: EAL domain protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0139 Theam_0140 Theam_0140 Theam_0140 118734 119582 + shikimate 5-dehydrogenase KEGG: pmx:PERMA_1072 shikimate 5-dehydrogenase~TIGRFAM: shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain protein%3B Shikimate/quinate 5-dehydrogenase gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0140 Theam_0141 Theam_0141 Theam_0141 119575 120846 + MgtC/SapB transporter PFAM: MgtC/SapB transporter~KEGG: pmx:PERMA_0650 hypothetical protein gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0141 Theam_0142 Theam_0142 Theam_0142 120882 121136 - ribosomal protein L27 KEGG: tal:Thal_1528 ribosomal protein L27~TIGRFAM: ribosomal protein L27~PFAM: ribosomal protein L27 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0142 Theam_0143 Theam_0143 Theam_0143 121162 121470 - ribosomal protein L21 KEGG: slp:Slip_0705 ribosomal protein L21~TIGRFAM: ribosomal protein L21~PFAM: ribosomal protein L21 gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0143 Theam_0144 Theam_0144 Theam_0144 121614 122156 + HNH endonuclease KEGG: hya:HY04AAS1_0070 HNH endonuclease~PFAM: HNH endonuclease~SMART: HNH nuclease gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0144 Theam_0145 Theam_0145 Theam_0145 122164 123630 - inosine-5'-monophosphate dehydrogenase SMART: CBS domain containing protein~TIGRFAM: inosine-5'-monophosphate dehydrogenase~KEGG: ddf:DEFDS_0469 inosine-5'-monophosphate dehydrogenase~PFAM: IMP dehydrogenase/GMP reductase%3B CBS domain containing protein gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0145 Theam_0146 Theam_0146 Theam_0146 123700 125079 + argininosuccinate lyase KEGG: pca:Pcar_2418 argininosuccinate lyase~TIGRFAM: argininosuccinate lyase~PFAM: fumarate lyase gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0146 Theam_0147 Theam_0147 Theam_0147 125099 125962 + Transketolase domain-containing protein PFAM: Transketolase domain-containing protein~KEGG: drm:Dred_3075 transketolase domain-containing protein gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0147 Theam_0148 Theam_0148 Theam_0148 125976 126911 + Transketolase central region protein PFAM: Transketolase central region%3B Transketolase domain-containing protein~KEGG: geo:Geob_1368 transketolase central region gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0148 Theam_0149 Theam_0149 Theam_0149 126912 128219 + carboxyl-terminal protease TIGRFAM: carboxyl-terminal protease~PFAM: peptidase S41%3B PDZ/DHR/GLGF domain protein~KEGG: pmx:PERMA_0187 carboxy-peptidase~SMART: peptidase S41%3B PDZ/DHR/GLGF domain protein gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0149 Theam_0150 Theam_0150 Theam_0150 128216 128839 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: hth:HTH_1859 putative biotin biosynthesis protein gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0150 Theam_0151 Theam_0151 Theam_0151 128730 129698 - hypothetical protein KEGG: tna:CTN_0898 hypothetical protein gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0151 Theam_0152 Theam_0152 Theam_0152 129695 130483 - ATP/GTP-binding protein KEGG: dfe:Dfer_2979 ATP/GTP-binding gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0152 Theam_0153 Theam_0153 Theam_0153 130474 131367 - NAD(+) kinase KEGG: geo:Geob_3461 ATP-NAD/AcoX kinase~PFAM: ATP-NAD/AcoX kinase gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0153 Theam_0154 Theam_0154 Theam_0154 131336 132019 - AAA ATPase SMART: AAA ATPase~KEGG: aae:aq_910 DNA replication protein DnaC gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0154 Theam_0155 Theam_0155 Theam_0155 132080 133150 + Radical SAM domain protein KEGG: hmo:HM1_1949 hypothetical protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0155 Theam_0156 Theam_0156 Theam_0156 133134 133763 - type IV pilus assembly PilZ PFAM: type IV pilus assembly PilZ~KEGG: pmx:PERMA_0736 hypothetical protein gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0156 Theam_0157 Theam_0157 Theam_0157 133756 135564 - methyl-accepting chemotaxis sensory transducer KEGG: pmx:PERMA_0737 putative methyl-accepting chemotaxis transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0157 Theam_0158 Theam_0158 Theam_0158 135643 136929 + RNA methyltransferase%2C TrmA family KEGG: pmx:PERMA_1601 23S rRNA (uracil-5-)-methyltransferase~TIGRFAM: RNA methyltransferase%2C TrmA family~PFAM: (Uracil-5)-methyltransferase gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0158 Theam_0159 Theam_0159 Theam_0159 136929 137834 + dihydroorotate dehydrogenase family protein KEGG: pth:PTH_1806 dihydroorotate dehydrogenase 1B~TIGRFAM: dihydroorotate dehydrogenase family protein~PFAM: dihydroorotate oxidase gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0159 Theam_0160 Theam_0160 Theam_0160 137839 140292 - ATP-dependent DNA helicase RecG TIGRFAM: ATP-dependent DNA helicase RecG~PFAM: DEAD/DEAH box helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type%3B helicase domain protein~KEGG: aae:aq_2053 ATP-dependent DNA helicase RecG~SMART: DEAD-like helicase %3B helicase domain protein gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0160 Theam_0161 Theam_0161 Theam_0161 140348 142099 + Tetratricopeptide TPR_1 repeat-containing protein KEGG: pmx:PERMA_0503 tetratricopeptide repeat domain protein~PFAM: Tetratricopeptide TPR_1 repeat-containing protein~SMART: Tetratricopeptide repeat gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0161 Theam_0162 Theam_0162 Theam_0162 142096 142587 + hypothetical protein KEGG: smu:SMU.261c putative transcriptional regulator gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0162 Theam_0163 Theam_0163 Theam_0163 142599 144029 + peptidase M17 leucyl aminopeptidase domain protein PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: aae:aq_2099 leucyl aminopeptidase gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0163 Theam_0164 Theam_0164 Theam_0164 144060 145349 + Cl- channel voltage-gated family protein PFAM: Cl- channel voltage-gated family protein~KEGG: nam:NAMH_0689 putative chloride channel protein gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0164 Theam_0165 Theam_0165 Theam_0165 145391 147685 + methyl-accepting chemotaxis sensory transducer with Cache sensor KEGG: dap:Dacet_0889 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein%3B Cache domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0165 Theam_0166 Theam_0166 Theam_0166 147704 149374 - diguanylate cyclase SMART: GGDEF domain containing protein~TIGRFAM: diguanylate cyclase~KEGG: nam:NAMH_0079 diguanylate cyclase (GGDEF) domain protein~PFAM: GGDEF domain containing protein gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0166 Theam_0167 Theam_0167 Theam_0167 154997 156139 - RNA ligase%2C T4 RnlA-like protein PFAM: RNA ligase%2C T4 RnlA-like~KEGG: bra:BRADO3560 putative RNA ligase gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0167 Theam_0168 Theam_0168 Theam_0168 156123 156857 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase~KEGG: pmx:PERMA_1646 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase~PFAM: histidine biosynthesis protein gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0168 Theam_0169 Theam_0169 Theam_0169 156867 157325 - hypothetical protein KEGG: amc:MADE_02873 flagellar biosynthesis protein FlhA gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0169 Theam_0170 Theam_0170 Theam_0170 157328 158239 - quinolinate synthetase complex%2C A subunit TIGRFAM: quinolinate synthetase complex%2C A subunit~KEGG: tai:Taci_1757 quinolinate synthetase complex%2C A subunit~PFAM: Quinolinate synthetase A gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0170 Theam_0171 Theam_0171 Theam_0171 158242 159798 - GMP synthase%2C large subunit KEGG: pmx:PERMA_0029 GMP synthase~TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~PFAM: GMP synthase domain protein%3B glutamine amidotransferase class-I gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0171 Theam_0172 Theam_0172 Theam_0172 159858 159950 - hypothetical protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0172 Theam_0173 Theam_0173 Theam_0173 159966 160670 - hypothetical protein KEGG: cdf:CD0977 hypothetical protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0173 Theam_0174 Theam_0174 Theam_0174 160660 161013 - hypothetical protein KEGG: smt:Smal_0546 general secretory pathway protein E gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0174 Theam_0175 Theam_0175 Theam_0175 161006 161407 - hypothetical protein KEGG: mcc:700951 EF-hand calcium-binding domain-containing protein 4A-like gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0175 Theam_0176 Theam_0176 Theam_0176 161425 162027 + protein of unknown function DUF152 PFAM: protein of unknown function DUF152~KEGG: hth:HTH_1582 hypothetical protein gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0176 Theam_0177 Theam_0177 Theam_0177 162027 163031 + DNA protecting protein DprA KEGG: ppd:Ppro_0529 DNA protecting protein DprA~TIGRFAM: DNA protecting protein DprA~PFAM: SMF family protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0177 Theam_0178 Theam_0178 Theam_0178 163025 163969 + protein of unknown function DUF185 PFAM: protein of unknown function DUF185~KEGG: chy:CHY_0386 hypothetical protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0178 Theam_0179 Theam_0179 Theam_0179 163978 165267 - adenylosuccinate synthetase SMART: adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthetase~KEGG: saf:SULAZ_0329 adenylosuccinate synthetase~PFAM: adenylosuccinate synthetase gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0179 Theam_0180 Theam_0180 Theam_0180 165312 166571 - histidyl-tRNA synthetase 2 TIGRFAM: histidyl-tRNA synthetase 2~KEGG: gbm:Gbem_0553 ATP phosphoribosyltransferase regulatory subunit~PFAM: tRNA synthetase class II (G H P and S) gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0180 Theam_0181 Theam_0181 Theam_0181 166574 167635 - threonine synthase KEGG: saf:SULAZ_1669 threonine synthase~TIGRFAM: threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0181 Theam_0182 Theam_0182 Theam_0182 167716 168588 + dihydrodipicolinate synthase KEGG: gur:Gura_0234 dihydrodipicolinate synthase~TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0182 Theam_0183 Theam_0183 Theam_0183 168590 169627 + hypothetical protein KEGG: pmx:PERMA_1519 hypothetical protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0183 Theam_0184 Theam_0184 Theam_0184 169627 170409 + dihydrodipicolinate reductase TIGRFAM: dihydrodipicolinate reductase~KEGG: tye:THEYE_A1649 dihydrodipicolinate reductase~PFAM: dihydrodipicolinate reductase gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0184 Theam_0185 Theam_0185 Theam_0185 170443 170859 + NIL domain protein PFAM: NIL domain~KEGG: sat:SYN_00800 ferridoxin gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0185 Theam_0186 Theam_0186 Theam_0186 170884 172998 - catalase/peroxidase HPI KEGG: sth:STH2416 catalase/peroxidase~TIGRFAM: catalase/peroxidase HPI~PFAM: Haem peroxidase gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0186 Theam_0187 Theam_0187 Theam_0187 173101 175308 - hypothetical protein KEGG: cby:CLM_0764 hypothetical protein gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0187 Theam_0188 Theam_0188 Theam_0188 175332 177923 - hypothetical protein KEGG: cby:CLM_0763 hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0188 Theam_0189 Theam_0189 Theam_0189 178005 178712 - orotidine 5'-phosphate decarboxylase TIGRFAM: orotidine 5'-phosphate decarboxylase~KEGG: tjr:TherJR_1827 orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0189 Theam_0190 Theam_0190 Theam_0190 178709 180004 - homoserine dehydrogenase PFAM: homoserine dehydrogenase%3B homoserine dehydrogenase NAD-binding%3B amino acid-binding ACT domain protein~KEGG: tye:THEYE_A1986 homoserine dehydrogenase (HDH): ThrA%2C MetL gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0190 Theam_0191 Theam_0191 Theam_0191 180017 181237 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: sfu:Sfum_1219 aminotransferase%2C class I and II gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0191 Theam_0192 Theam_0192 Theam_0192 181513 182265 + periplasmic binding protein PFAM: periplasmic binding protein~KEGG: tye:THEYE_A1173 ABC-type Fe3+-siderophores transport system%2C periplasmic component%2C putative gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0192 Theam_0193 Theam_0193 Theam_0193 182256 183158 + transport system permease protein PFAM: transport system permease protein~KEGG: glo:Glov_3558 transport system permease protein gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0193 Theam_0194 Theam_0194 Theam_0194 183145 183849 + ABC transporter related protein KEGG: pho:PH1235 ferrichrome transport ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0194 Theam_0195 Theam_0195 Theam_0195 183861 185684 + TonB-dependent receptor plug PFAM: TonB-dependent receptor plug%3B TonB-dependent receptor~KEGG: cpc:Cpar_1184 TonB-dependent receptor gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0195 Theam_0196 Theam_0196 Theam_0196 185795 186565 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: pmx:PERMA_1368 NADH dehydrogenase gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0196 Theam_0197 Theam_0197 Theam_0197 186590 187558 + Citryl-CoA lyase KEGG: cph:Cpha266_2198 HpcH/HpaI aldolase~PFAM: HpcH/HpaI aldolase gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0197 Theam_0198 Theam_0198 Theam_0198 187533 188444 - transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: tye:THEYE_A0898 transcriptional regulator gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0198 Theam_0199 Theam_0199 Theam_0199 188446 188769 - hypothetical protein KEGG: btb:BMB171_C2996 hypothetical protein gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0199 Theam_0200 Theam_0200 Theam_0200 188838 189458 - protein of unknown function DUF309 PFAM: protein of unknown function DUF309~KEGG: gbm:Gbem_1147 protein of unknown function DUF309 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0200 Theam_0201 Theam_0201 Theam_0201 189510 190781 - 3-isopropylmalate dehydratase%2C large subunit KEGG: adg:Adeg_0227 3-isopropylmalate dehydratase%2C large subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit%3B 3-isopropylmalate dehydratase%3B homoaconitate hydratase family protein~PFAM: aconitate hydratase domain-containing protein gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0201 Theam_0202 Theam_0202 Theam_0202 190880 191527 + hypothetical protein KEGG: cco:CCC13826_0899 large repetitive protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0202 Theam_0203 Theam_0203 Theam_0203 191524 192729 + peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: dak:DaAHT2_0695 peptidase M48 Ste24p gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0203 Theam_0204 Theam_0204 Theam_0204 192738 194198 + hypothetical protein KEGG: saf:SULAZ_1356 flagellar biosynthetic protein FliR gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0204 Theam_0205 Theam_0205 Theam_0205 194211 194852 + nicotinate (nicotinamide) nucleotide adenylyltransferase TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain protein~KEGG: tal:Thal_0519 nicotinate (nicotinamide) nucleotide adenylyltransferase~PFAM: cytidylyltransferase gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0205 Theam_0206 Theam_0206 Theam_0206 194830 196050 + Phosphoglycerate kinase KEGG: dth:DICTH_1003 phosphoglycerate kinase~PFAM: phosphoglycerate kinase gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0206 Theam_0207 Theam_0207 Theam_0207 196047 196472 - hypothetical protein KEGG: mfs:MFS40622_1040 hypothetical protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0207 Theam_0208 Theam_0208 Theam_0208 196465 197232 - hypothetical protein KEGG: ana:all7130 hypothetical protein gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0208 Theam_0209 Theam_0209 Theam_0209 197303 197695 - hypothetical protein KEGG: tva:TVAG_300870 hypothetical protein gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0209 Theam_0210 Theam_0210 Theam_0210 197801 199003 - Peptidoglycan-binding lysin domain protein KEGG: bld:BLi01486 hypothetical protein~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0210 Theam_0211 Theam_0211 Theam_0211 198982 200298 - gid protein TIGRFAM: gid protein~KEGG: aae:aq_691 tRNA (uracil-5-)-methyltransferase Gid~PFAM: glucose-inhibited division protein A gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0211 Theam_0212 Theam_0212 Theam_0212 200365 200850 + rfaE bifunctional protein KEGG: aae:aq_185 glycerol-3-phosphate cytidyltransferase~TIGRFAM: rfaE bifunctional protein%3B cytidyltransferase-related domain protein~PFAM: cytidylyltransferase gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0212 Theam_0213 Theam_0213 Theam_0213 200792 202018 - metal dependent phosphohydrolase KEGG: bse:Bsel_3216 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0213 Theam_0214 Theam_0214 Theam_0214 202005 202433 - ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: hth:HTH_1439 transcriptional regulator%2C Fur family gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0214 Theam_0215 Theam_0215 Theam_0215 202507 203451 - methionyl-tRNA formyltransferase KEGG: pmx:PERMA_0584 methionyl-tRNA formyltransferase~TIGRFAM: methionyl-tRNA formyltransferase~PFAM: formyl transferase domain protein gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0215 Theam_0216 Theam_0216 Theam_0216 203432 204052 - Sua5/YciO/YrdC/YwlC family protein KEGG: pmx:PERMA_1686 SUA5/YciO/YrdC/YwlC family protein~TIGRFAM: Sua5/YciO/YrdC/YwlC family protein~PFAM: SUA5/yciO/yrdC domain gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0216 Theam_0217 Theam_0217 Theam_0217 204042 204938 - protein of unknown function DUF89 PFAM: protein of unknown function DUF89~KEGG: aae:aq_893 hypothetical protein gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0217 Theam_0218 Theam_0218 Theam_0218 204940 205407 - phosphoribosylaminoimidazole carboxylase%2C catalytic subunit PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase~manually curated~KEGG: pmx:PERMA_0641 phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0218 Theam_0219 Theam_0219 Theam_0219 205307 206275 - hypothetical protein KEGG: saf:SULAZ_0372 putative lipoprotein gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0219 Theam_0220 Theam_0220 Theam_0220 206336 206908 + translation elongation factor P KEGG: sul:SYO3AOP1_1061 elongation factor P~TIGRFAM: translation elongation factor P~PFAM: Elongation factor P %3B Elongation factor KOW-like domain-containing protein%3B Elongation factor P/YeiP protein gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0220 Theam_0221 Theam_0221 Theam_0221 206919 207371 + acetyl-CoA carboxylase%2C biotin carboxyl carrier protein KEGG: saf:SULAZ_0421 acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxyl carrier protein~PFAM: biotin/lipoyl attachment domain-containing protein gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0221 Theam_0222 Theam_0222 Theam_0222 207380 208726 + acetyl-CoA carboxylase%2C biotin carboxylase KEGG: saf:SULAZ_0507 acetyl-CoA carboxylase%2C biotin carboxylase subunit~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0222 Theam_0223 Theam_0223 Theam_0223 208772 209242 + Like-Sm ribonucleoprotein core PFAM: Like-Sm ribonucleoprotein core~KEGG: saf:SULAZ_0969 RNA chaperone Hfq gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0223 Theam_0224 Theam_0224 Theam_0224 209249 209743 + Like-Sm ribonucleoprotein core PFAM: Like-Sm ribonucleoprotein core~KEGG: fph:Fphi_1538 host factor I for bacteriophage Q beta replication gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0224 Theam_0225 Theam_0225 Theam_0225 209731 210402 - transcriptional regulator domain-containing protein PFAM: transcriptional regulator domain-containing protein~KEGG: nis:NIS_1288 two-component response regulator gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0225 Theam_0226 Theam_0226 Theam_0226 210568 212697 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: hmo:HM1_3029 ATP-dependent DNA helicase PcrA gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0226 Theam_0227 Theam_0227 Theam_0227 212708 213853 + aminotransferase class V PFAM: aminotransferase class V~KEGG: nde:NIDE3444 serine-glyoxylate transaminase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0227 Theam_0228 Theam_0228 Theam_0228 213889 214311 + peptidylprolyl isomerase FKBP-type PFAM: peptidylprolyl isomerase FKBP-type~KEGG: nam:NAMH_0330 fkbp-type peptidyl-prolyl cis-trans isomerase SlyD gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0228 Theam_0229 Theam_0229 Theam_0229 214312 214896 + flavin reductase domain protein FMN-binding protein PFAM: flavin reductase domain protein FMN-binding~KEGG: rfr:Rfer_0945 hypothetical protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0229 Theam_0230 Theam_0230 Theam_0230 215083 216570 - UbiD family decarboxylase KEGG: ddf:DEFDS_1642 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD~TIGRFAM: UbiD family decarboxylase~PFAM: Carboxylyase-related protein gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0230 Theam_0231 Theam_0231 Theam_0231 216624 217412 + protein of unknown function DUF34 PFAM: protein of unknown function DUF34~KEGG: sfu:Sfum_1210 hypothetical protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0231 Theam_0232 Theam_0232 Theam_0232 217399 218115 + protein of unknown function DUF164 PFAM: protein of unknown function DUF164~KEGG: aae:aq_1223 hypothetical protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0232 Theam_0233 Theam_0233 Theam_0233 218138 220573 - ATP-dependent protease La SMART: peptidase S16 lon domain protein%3B AAA ATPase~TIGRFAM: ATP-dependent protease La~KEGG: pmx:PERMA_1161 ATP-dependent protease La~PFAM: peptidase S16 lon domain protein%3B AAA ATPase central domain protein gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0233 Theam_0234 Theam_0234 Theam_0234 220545 221444 - UTP-glucose-1-phosphate uridylyltransferase KEGG: clj:CLJU_c34190 UTP--glucose-1-phosphate uridylyltransferase~TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0234 Theam_0235 Theam_0235 Theam_0235 221473 222672 - protein of unknown function Met10 KEGG: aae:aq_2071 hypothetical protein~PFAM: protein of unknown function Met10~SMART: PUA domain containing protein gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0235 Theam_0236 Theam_0236 Theam_0236 222676 223791 - geranylgeranyl reductase KEGG: nde:NIDE0852 geranylgeranyl reductase family protein~TIGRFAM: geranylgeranyl reductase~PFAM: FAD dependent oxidoreductase gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0236 Theam_0237 Theam_0237 Theam_0237 223796 224935 - carbamoyl-phosphate synthase%2C small subunit KEGG: aae:aq_410 carbamoyl phosphate synthase small subunit~TIGRFAM: carbamoyl-phosphate synthase%2C small subunit~PFAM: Carbamoyl-phosphate synthase small chain%3B glutamine amidotransferase class-I gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0237 Theam_0238 Theam_0238 Theam_0238 225029 225868 + periplasmic solute binding protein PFAM: periplasmic solute binding protein~KEGG: hth:HTH_0046 ABC-type metal ion transport system periplasmic component/surface adhesin gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0238 Theam_0239 Theam_0239 Theam_0239 225865 226434 + glutamine amidotransferase of anthranilate synthase KEGG: ppd:Ppro_1581 anthranilate synthase component II~TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: glutamine amidotransferase class-I gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0239 Theam_0240 Theam_0240 Theam_0240 226431 227525 + lipid-A-disaccharide synthase TIGRFAM: lipid-A-disaccharide synthase~KEGG: dak:DaAHT2_0811 lipid-A-disaccharide synthase~PFAM: glycosyl transferase family 19 gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0240 Theam_0241 Theam_0241 Theam_0241 227522 228616 + rRNA (guanine-N(2)-)-methyltransferase KEGG: pca:Pcar_2256 N6-adenine-specific DNA methylase~PFAM: RNA methylase gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0241 Theam_0242 Theam_0242 Theam_0242 228658 229780 + hypothetical protein manually curated~KEGG: zma:100279216 hypothetical protein LOC100279216 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0242 Theam_0243 Theam_0243 Theam_0243 229773 230075 + CRISPR-associated protein%2C Csx3 family KEGG: aae:aq_377 hypothetical protein~TIGRFAM: CRISPR-associated protein%2C Csx3 family~PFAM: CRISPR-associated protein Csx3 gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0243 Theam_0244 Theam_0244 Theam_0244 230072 231022 + dihydrouridine synthase DuS PFAM: dihydrouridine synthase DuS~KEGG: aae:aq_1598 hypothetical protein gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0244 Theam_0245 Theam_0245 Theam_0245 231101 231370 + ribosomal protein S15 KEGG: ddf:DEFDS_1521 30S ribosomal protein S15~TIGRFAM: ribosomal protein S15~PFAM: ribosomal protein S15 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0245 Theam_0246 Theam_0246 Theam_0246 231496 233640 + polyribonucleotide nucleotidyltransferase TIGRFAM: polyribonucleotide nucleotidyltransferase~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%3B K Homology%2C type 1%2C subgroup%3B RNA binding S1 domain protein~KEGG: saf:SULAZ_0563 polynucleotide phosphorylase/polyadenylase~SMART: KH domain protein gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0246 Theam_0247 Theam_0247 Theam_0247 233633 234487 + deoxyUTP pyrophosphatase PFAM: deoxyUTP pyrophosphatase~KEGG: tva:TVAG_379830 deoxyuridine 5'-triphosphate nucleotidohydrolase family protein gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0247 Theam_0248 Theam_0248 Theam_0248 234542 235237 + Rhomboid family protein PFAM: Rhomboid family protein~KEGG: sti:Sthe_1778 rhomboid family protein gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0248 Theam_0249 Theam_0249 Theam_0249 235217 236302 - AAA ATPase central domain protein KEGG: sto:ST2584 cell division control protein~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0249 Theam_0250 Theam_0250 Theam_0250 236451 237986 + 2-isopropylmalate synthase KEGG: aae:aq_2090 2-isopropylmalate synthase~TIGRFAM: 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain-containing protein gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0250 Theam_0251 Theam_0251 Theam_0251 238147 238578 + hypothetical protein KEGG: tet:TTHERM_00123570 cyclic nucleotide-binding domain containing protein gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0251 Theam_0252 Theam_0252 Theam_0252 238648 239028 + ribosomal protein S12 KEGG: tna:CTN_0988 30S ribosomal protein S12~TIGRFAM: ribosomal protein S12~PFAM: ribosomal protein S12/S23 gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0252 Theam_0253 Theam_0253 Theam_0253 239045 239515 + ribosomal protein S7 KEGG: sul:SYO3AOP1_0295 30S ribosomal protein S7~TIGRFAM: ribosomal protein S7~PFAM: ribosomal protein S7 gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0253 Theam_0254 Theam_0254 Theam_0254 239539 241641 + translation elongation factor G KEGG: gsu:GSU2860 elongation factor G~TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV%3B elongation factor G domain-containing protein gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0254 Theam_0255 Theam_0255 Theam_0255 241771 242967 + translation elongation factor Tu KEGG: slp:Slip_2239 translation elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain-containing protein gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0255 Theam_0256 Theam_0256 Theam_0256 242988 243299 + ribosomal protein S10 KEGG: pmx:PERMA_1195 30S ribosomal protein S10~TIGRFAM: ribosomal protein S10~PFAM: ribosomal protein S10 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0256 Theam_0257 Theam_0257 Theam_0257 243315 243938 + 50S ribosomal protein L3 KEGG: pth:PTH_0320 50S ribosomal protein L3~TIGRFAM: 50S ribosomal protein L3~PFAM: ribosomal protein L3 gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0257 Theam_0258 Theam_0258 Theam_0258 243949 244575 + ribosomal protein L4/L1e PFAM: ribosomal protein L4/L1e~KEGG: pmx:PERMA_1197 ribosomal protein%2C L4/L1 family gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0258 Theam_0259 Theam_0259 Theam_0259 244572 244895 + Ribosomal protein L25/L23 PFAM: Ribosomal protein L25/L23~KEGG: aae:aq_012 50S ribosomal protein L23 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0259 Theam_0260 Theam_0260 Theam_0260 244911 245738 + ribosomal protein L2 KEGG: pmx:PERMA_1199 50S ribosomal protein L2~TIGRFAM: ribosomal protein L2~PFAM: ribosomal protein L2 gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0260 Theam_0261 Theam_0261 Theam_0261 245748 246026 + ribosomal protein S19 KEGG: rmr:Rmar_0846 ribosomal protein S19~TIGRFAM: ribosomal protein S19~PFAM: ribosomal protein S19/S15 gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0261 Theam_0262 Theam_0262 Theam_0262 246040 246438 + ribosomal protein L22 KEGG: adg:Adeg_1519 ribosomal protein L22~TIGRFAM: ribosomal protein L22~PFAM: ribosomal protein L22/L17 gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0262 Theam_0263 Theam_0263 Theam_0263 246458 247156 + ribosomal protein S3 KEGG: pmx:PERMA_1202 ribosomal protein S3~TIGRFAM: ribosomal protein S3~PFAM: ribosomal protein S3- domain protein%3B Ribosomal protein S3 domain%3B KH type 2 domain protein gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0263 Theam_0264 Theam_0264 Theam_0264 247159 247587 + ribosomal protein L16 KEGG: ate:Athe_1738 50S ribosomal protein L16~TIGRFAM: ribosomal protein L16~PFAM: Ribosomal protein L10e/L16 gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0264 Theam_0265 Theam_0265 Theam_0265 247591 247791 + ribosomal protein L29 KEGG: tjr:TherJR_0304 ribosomal protein L29~TIGRFAM: ribosomal protein L29~PFAM: ribosomal protein L29 gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0265 Theam_0266 Theam_0266 Theam_0266 247803 248096 + 30S ribosomal protein S17 KEGG: tai:Taci_1175 ribosomal protein S17~TIGRFAM: 30S ribosomal protein S17~PFAM: ribosomal protein S17 gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0266 Theam_0267 Theam_0267 Theam_0267 248120 248488 + ribosomal protein L14 KEGG: chy:CHY_2299 50S ribosomal protein L14~TIGRFAM: ribosomal protein L14~PFAM: ribosomal protein L14b/L23e gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0267 Theam_0268 Theam_0268 Theam_0268 248501 248857 + ribosomal protein L24 TIGRFAM: ribosomal protein L24~PFAM: KOW domain protein~KEGG: aac:Aaci_2700 50S ribosomal protein L24~SMART: KOW domain protein gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0268 Theam_0269 Theam_0269 Theam_0269 248876 249433 + 50S ribosomal protein L5 KEGG: pmx:PERMA_1208 50S ribosomal protein L5 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0269 Theam_0270 Theam_0270 Theam_0270 249452 249637 + ribosomal protein S14 PFAM: ribosomal protein S14~KEGG: chy:CHY_2296 30S ribosomal protein S14 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0270 Theam_0271 Theam_0271 Theam_0271 249664 250086 + ribosomal protein S8 PFAM: ribosomal protein S8~KEGG: adg:Adeg_1510 ribosomal protein S8 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0271 Theam_0272 Theam_0272 Theam_0272 250112 250654 + ribosomal protein L6 KEGG: saf:SULAZ_1740 ribosomal protein L6~TIGRFAM: ribosomal protein L6~PFAM: Ribosomal protein L6%2C alpha-beta domain gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0272 Theam_0273 Theam_0273 Theam_0273 250673 251038 + ribosomal protein L18 KEGG: tna:CTN_1009 50S ribosomal protein L18~TIGRFAM: ribosomal protein L18~PFAM: ribosomal protein L18P/L5E gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0273 Theam_0274 Theam_0274 Theam_0274 251048 251605 + ribosomal protein S5 KEGG: hor:Hore_01340 ribosomal protein S5~TIGRFAM: ribosomal protein S5~PFAM: Ribosomal protein S5 %3B ribosomal protein S5 domain protein gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0274 Theam_0275 Theam_0275 Theam_0275 251608 251793 + ribosomal protein L30 KEGG: vpr:Vpar_1476 ribosomal protein L30~TIGRFAM: ribosomal protein L30~PFAM: ribosomal protein L30 gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0275 Theam_0276 Theam_0276 Theam_0276 251795 252253 + ribosomal protein L15 TIGRFAM: ribosomal protein L15~KEGG: tte:TTE2273 ribosomal protein L15 gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0276 Theam_0277 Theam_0277 Theam_0277 252265 253599 + preprotein translocase%2C SecY subunit KEGG: gsu:GSU2837 preprotein translocase subunit SecY~TIGRFAM: preprotein translocase%2C SecY subunit~PFAM: SecY protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0277 Theam_0278 Theam_0278 Theam_0278 253596 254159 + adenylate kinase KEGG: svi:Svir_04190 adenylate kinase~TIGRFAM: adenylate kinase~PFAM: adenylate kinase gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0278 Theam_0279 Theam_0279 Theam_0279 254162 254932 + methionine aminopeptidase%2C type I KEGG: dvm:DvMF_0100 methionine aminopeptidase%2C type I~TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24 gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0279 Theam_0280 Theam_0280 Theam_0280 254929 255186 + translation initiation factor IF-1 KEGG: dps:DP1147 translation initiation factor IF-1~TIGRFAM: translation initiation factor IF-1~PFAM: S1 IF1 family protein gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0280 Theam_0281 Theam_0281 Theam_0281 255245 255361 + ribosomal protein L36 KEGG: dds:Ddes_0682 50S ribosomal protein L36~TIGRFAM: ribosomal protein L36~PFAM: ribosomal protein L36 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0281 Theam_0282 Theam_0282 Theam_0282 255373 255753 + 30S ribosomal protein S13 KEGG: tte:TTE2266 30S ribosomal protein S13~TIGRFAM: 30S ribosomal protein S13~PFAM: ribosomal protein S13 gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0282 Theam_0283 Theam_0283 Theam_0283 255770 256159 + 30S ribosomal protein S11 KEGG: pmx:PERMA_1222 30S ribosomal protein S11~TIGRFAM: 30S ribosomal protein S11~PFAM: ribosomal protein S11 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0283 Theam_0284 Theam_0284 Theam_0284 256172 256798 + ribosomal protein S4 TIGRFAM: ribosomal protein S4~PFAM: RNA-binding S4 domain protein%3B ribosomal protein S4~KEGG: nam:NAMH_1696 30S ribosomal protein S4~SMART: RNA-binding S4 domain protein gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0284 Theam_0285 Theam_0285 Theam_0285 256829 257779 + DNA-directed RNA polymerase%2C alpha subunit TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase insert%3B RNA polymerase dimerisation%3B RNA polymerase alpha subunit domain protein~KEGG: tal:Thal_0742 DNA-directed RNA polymerase%2C alpha subunit~SMART: RNA polymerase RpoA/D/Rpb3-type gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0285 Theam_0286 Theam_0286 Theam_0286 257782 258189 + ribosomal protein L17 KEGG: gme:Gmet_0654 50S ribosomal protein L17~TIGRFAM: ribosomal protein L17~PFAM: ribosomal protein L17 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0286 Theam_0287 Theam_0287 Theam_0287 258263 258517 - cell division topological specificity factor MinE KEGG: dtu:Dtur_1398 cell division topological specificity factor MinE~TIGRFAM: cell division topological specificity factor MinE~PFAM: Septum formation topological specificity factor MinE gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0287 Theam_0288 Theam_0288 Theam_0288 258520 259320 - septum site-determining protein MinD TIGRFAM: septum site-determining protein MinD~KEGG: sul:SYO3AOP1_0552 septum site-determining protein MinD gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0288 Theam_0289 Theam_0289 Theam_0289 259320 259970 - Septum formation inhibitor MinC PFAM: Septum formation inhibitor MinC~KEGG: slp:Slip_0694 septum site-determining protein MinC gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0289 Theam_0290 Theam_0290 Theam_0290 260024 260824 + agmatinase KEGG: mif:Metin_1095 agmatinase~TIGRFAM: agmatinase~PFAM: Arginase/agmatinase/formiminoglutamase gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0290 Theam_0291 Theam_0291 Theam_0291 260826 261689 + spermidine synthase TIGRFAM: spermidine synthase~KEGG: saf:SULAZ_0709 spermidine synthase~PFAM: Spermine synthase gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0291 Theam_0292 Theam_0292 Theam_0292 261692 262747 + protein of unknown function DUF43 PFAM: protein of unknown function DUF43~KEGG: tko:TK1691 hypothetical protein gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0292 Theam_0293 Theam_0293 Theam_0293 262776 263711 - Bile acid:sodium symporter PFAM: Bile acid:sodium symporter~KEGG: asu:Asuc_1159 bile acid:sodium symporter gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0293 Theam_0294 Theam_0294 Theam_0294 263729 264154 - hypothetical protein KEGG: mag:amb4257 hypothetical protein gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0294 Theam_0295 Theam_0295 Theam_0295 264610 265494 - purine or other phosphorylase family 1 PFAM: purine or other phosphorylase family 1~KEGG: hth:HTH_1912 purine nucleoside phosphorylase gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0295 Theam_0296 Theam_0296 Theam_0296 265487 265981 - 7-cyano-7-deazaguanine reductase TIGRFAM: 7-cyano-7-deazaguanine reductase~KEGG: vpr:Vpar_0139 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0296 Theam_0297 Theam_0297 Theam_0297 266382 266981 + ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 KEGG: sul:SYO3AOP1_1687 50S ribosomal protein L25/general stress protein Ctc~TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5~PFAM: Ribosomal protein L25-like gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0297 Theam_0298 Theam_0298 Theam_0298 266981 267547 + peptidyl-tRNA hydrolase TIGRFAM: peptidyl-tRNA hydrolase~KEGG: sth:STH3238 peptidyl-tRNA hydrolase~PFAM: peptidyl-tRNA hydrolase gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0298 Theam_0299 Theam_0299 Theam_0299 267558 267938 + ribosomal protein S6 KEGG: pmx:PERMA_1291 ribosomal protein S6~TIGRFAM: ribosomal protein S6~PFAM: Ribosomal protein S6%2C bacterial-like gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0299 Theam_0300 Theam_0300 Theam_0300 267938 268315 + single-strand binding protein KEGG: saf:SULAZ_0474 single-strand binding protein family protein~TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0300 Theam_0301 Theam_0301 Theam_0301 268331 268573 + ribosomal protein S18 KEGG: tye:THEYE_A0795 ribosomal protein S18~TIGRFAM: ribosomal protein S18~PFAM: ribosomal protein S18 gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0301 Theam_0302 Theam_0302 Theam_0302 268578 269378 + hypothetical protein KEGG: pca:Pcar_1997 hypothetical protein gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0302 Theam_0303 Theam_0303 Theam_0303 269359 269811 + ribosomal protein L9 KEGG: tte:TTE2775 ribosomal protein L9~TIGRFAM: ribosomal protein L9~PFAM: Ribosomal protein L9-like gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0303 Theam_0304 Theam_0304 Theam_0304 269847 270374 + S-adenosylmethionine decarboxylase related protein PFAM: S-adenosylmethionine decarboxylase related~KEGG: sfu:Sfum_0720 S-adenosylmethionine decarboxylase related gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0304 Theam_0305 Theam_0305 Theam_0305 270360 271199 - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: pmx:PERMA_0782 hypothetical protein gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0305 Theam_0306 Theam_0306 Theam_0306 271178 271558 - endoribonuclease L-PSP KEGG: hbu:Hbut_0217 YjgH/F family protein - putative translation initiation inhibitor~TIGRFAM: endoribonuclease L-PSP~PFAM: Endoribonuclease L-PSP gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0306 Theam_0307 Theam_0307 Theam_0307 271712 272026 + regulatory protein ArsR KEGG: alv:Alvin_3027 transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0307 Theam_0308 Theam_0308 Theam_0308 272030 272869 + acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit KEGG: tye:THEYE_A0559 acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit~PFAM: carboxyl transferase gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0308 Theam_0309 Theam_0309 Theam_0309 272871 273110 + hypothetical protein KEGG: mxa:MXAN_3350 hypothetical protein gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0309 Theam_0310 Theam_0310 Theam_0310 273119 276295 + transcription-repair coupling factor TIGRFAM: transcription-repair coupling factor~PFAM: DEAD/DEAH box helicase domain protein%3B transcription factor CarD%3B helicase domain protein%3B TRCF domain protein~KEGG: glo:Glov_0700 transcription-repair coupling factor~SMART: DEAD-like helicase %3B helicase domain protein gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0310 Theam_0311 Theam_0311 Theam_0311 276297 277007 + Ankyrin KEGG: pmx:PERMA_0371 MHC_I C-terminus family protein~PFAM: Ankyrin~SMART: Ankyrin gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0311 Theam_0312 Theam_0312 Theam_0312 277016 277510 - hypothetical protein KEGG: str:Sterm_2542 hypothetical protein gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0312 Theam_0313 Theam_0313 Theam_0313 277588 278736 + hypothetical protein KEGG: sun:SUN_2276 hypothetical protein gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0313 Theam_0314 Theam_0314 Theam_0314 278790 279866 + phosphate ABC transporter%2C periplasmic phosphate-binding protein KEGG: nis:NIS_0582 phosphate ABC transporter%2C substrate-binding protein~TIGRFAM: phosphate ABC transporter%2C periplasmic phosphate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0314 Theam_0315 Theam_0315 Theam_0315 280074 282884 + excinuclease ABC%2C A subunit TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter related~KEGG: aae:aq_686 excinuclease ABC subunit A~SMART: AAA ATPase gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0315 Theam_0316 Theam_0316 Theam_0316 282942 283298 + DsrE family protein PFAM: DsrE family protein~KEGG: dia:Dtpsy_2206 DsrE family protein gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0316 Theam_0317 Theam_0317 Theam_0317 283327 284055 - chain A%2C iron Centre cytochrome c protein KEGG: dhd:Dhaf_3269 chain A%2C iron Centre cytochrome c protein gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0317 Theam_0318 Theam_0318 Theam_0318 284136 284879 + transcriptional regulator%2C TrmB KEGG: pfu:PF0124 hypothetical protein gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0318 Theam_0319 Theam_0319 Theam_0319 284915 285943 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: pwa:Pecwa_2165 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0319 Theam_0320 Theam_0320 Theam_0320 285946 286293 - hypothetical protein KEGG: sun:SUN_0363 hypothetical protein gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0320 Theam_0321 Theam_0321 Theam_0321 286268 286603 - SpoVG family protein PFAM: SpoVG family protein~KEGG: saf:SULAZ_0889 putative septation protein spoVG gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0321 Theam_0322 Theam_0322 Theam_0322 286593 287027 - hypothetical protein KEGG: npu:Npun_F1008 hypothetical protein gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0322 Theam_0323 Theam_0323 Theam_0323 287075 287737 + putative phosphoribosyltransferase KEGG: mpd:MCP_2970 putative phosphoribosyltransferase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0323 Theam_0324 Theam_0324 Theam_0324 287734 288108 + CMP/dCMP deaminase zinc-binding protein PFAM: CMP/dCMP deaminase zinc-binding~KEGG: abi:Aboo_1393 cytidine deaminase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0324 Theam_0325 Theam_0325 Theam_0325 288119 288790 + two component transcriptional regulator%2C winged helix family KEGG: nwi:Nwi_0511 phosphate regulon transcriptional regulatory protein PhoB~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0325 Theam_0326 Theam_0326 Theam_0326 289301 289885 + hypothetical protein KEGG: ami:Amir_2430 transcriptional regulator%2C XRE family gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0326 Theam_0327 Theam_0327 Theam_0327 289933 294273 + Glutamate synthase (ferredoxin) KEGG: hth:HTH_0871 ferredoxin-dependent glutamate synthase~PFAM: ferredoxin-dependent glutamate synthase%3B glutamine amidotransferase class-II%3B glutamate synthase%3B glutamate synthase alpha subunit domain protein gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0327 Theam_0328 Theam_0328 Theam_0328 294304 295899 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase SMART: AICARFT/IMPCHase bienzyme formylation region~TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~KEGG: pmx:PERMA_1500 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme formylation region%3B MGS domain protein gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0328 Theam_0329 Theam_0329 Theam_0329 295988 296848 + band 7 protein KEGG: hya:HY04AAS1_1091 band 7 protein~PFAM: band 7 protein~SMART: band 7 protein gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0329 Theam_0330 Theam_0330 Theam_0330 296835 297278 + protein of unknown function DUF107 PFAM: protein of unknown function DUF107~KEGG: pab:PAB1325 hypothetical protein gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0330 Theam_0331 Theam_0331 Theam_0331 297271 298344 + alanine racemase TIGRFAM: alanine racemase~KEGG: tal:Thal_0333 alanine racemase~PFAM: alanine racemase domain protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0331 Theam_0332 Theam_0332 Theam_0332 298319 299119 + ribosomal L11 methyltransferase PFAM: ribosomal L11 methyltransferase~KEGG: fma:FMG_0778 ribosomal protein L11 methyltransferase gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0332 Theam_0333 Theam_0333 Theam_0333 299095 299940 + PHP domain protein KEGG: hmo:HM1_0436 hypothetical protein~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0333 Theam_0334 Theam_0334 Theam_0334 300340 302250 - Protein of unknown function DUF2081 PFAM: Protein of unknown function DUF2081%3B protein of unknown function DUF262~KEGG: kol:Kole_0055 protein of unknown function DUF262 gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0334 Theam_0335 Theam_0335 Theam_0335 302422 302673 + hypothetical protein KEGG: geo:Geob_1483 hypothetical protein gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0335 Theam_0336 Theam_0336 Theam_0336 302673 303203 + 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: tye:THEYE_A1396 ATP-dependent protease peptidase subunit gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0336 Theam_0337 Theam_0337 Theam_0337 303213 304655 + heat shock protein HslVU%2C ATPase subunit HslU TIGRFAM: heat shock protein HslVU%2C ATPase subunit HslU~PFAM: ATPase AAA-2 domain protein%3B Clp ATPase-like~KEGG: saf:SULAZ_1537 ATP-dependent protease ATP-binding subunit HslU~SMART: AAA ATPase gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0337 Theam_0338 Theam_0338 Theam_0338 304664 305695 + peptidase M24 PFAM: peptidase M24%3B creatinase~KEGG: gtn:GTNG_2342 proline dipeptidase gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0338 Theam_0339 Theam_0339 Theam_0339 305685 306545 - hypothetical protein KEGG: saf:SULAZ_0856 hypothetical protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0339 Theam_0340 Theam_0340 Theam_0340 306548 306919 - hypothetical protein manually curated~KEGG: saf:SULAZ_0857 hypothetical protein gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0340 Theam_0341 Theam_0341 Theam_0341 306897 308084 - protein of unknown function DUF324 PFAM: protein of unknown function DUF324~KEGG: saf:SULAZ_0858 crispr-associated RAMP protein%2C Cmr4 family gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0341 Theam_0342 Theam_0342 Theam_0342 308086 311181 - CRISPR-associated protein%2C Csx11 family TIGRFAM: CRISPR-associated protein%2C Csx11 family~KEGG: tit:Thit_1355 CRISPR-associated protein%2C Csx11 family gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0342 Theam_0343 Theam_0343 Theam_0343 311169 312332 - protein of unknown function DUF324 PFAM: protein of unknown function DUF324~KEGG: mif:Metin_0165 protein of unknown function DUF324 gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0343 Theam_0344 Theam_0344 Theam_0344 312325 313587 - CRISPR-associated RAMP protein%2C Cmr1 family TIGRFAM: CRISPR-associated RAMP protein%2C Cmr1 family~KEGG: mif:Metin_0164 CRISPR-associated RAMP protein%2C Cmr1 family gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0344 Theam_0345 Theam_0345 Theam_0345 313676 314776 + queuine tRNA-ribosyltransferase TIGRFAM: queuine tRNA-ribosyltransferase%3B tRNA-guanine transglycosylase%2C various specificities~KEGG: sul:SYO3AOP1_1259 queuine tRNA-ribosyltransferase~PFAM: Queuine/other tRNA-ribosyltransferase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0345 Theam_0346 Theam_0346 Theam_0346 314778 315068 - mevalonate kinase KEGG: mfs:MFS40622_0170 mevalonate kinase gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0346 Theam_0347 Theam_0347 Theam_0347 315156 315659 + 3-isopropylmalate dehydratase%2C small subunit KEGG: pmx:PERMA_0505 3-isopropylmalate dehydratase%2C small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain-containing protein gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0347 Theam_0348 Theam_0348 Theam_0348 315671 316750 + 3-isopropylmalate dehydrogenase TIGRFAM: 3-isopropylmalate dehydrogenase~KEGG: hth:HTH_1526 3-isopropylmalate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0348 Theam_0349 Theam_0349 Theam_0349 316762 317778 + aspartate-semialdehyde dehydrogenase TIGRFAM: aspartate-semialdehyde dehydrogenase~KEGG: saf:SULAZ_1661 aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase dimerisation region%3B Semialdehyde dehydrogenase NAD - binding gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0349 Theam_0350 Theam_0350 Theam_0350 317791 318150 + hypothetical protein KEGG: iho:Igni_0929 roadblock/LC7 family protein gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0350 Theam_0351 Theam_0351 Theam_0351 318164 318856 + metal-dependent hydrolase KEGG: trq:TRQ2_1653 metal-dependent hydrolase gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0351 Theam_0352 Theam_0352 Theam_0352 318856 319605 + Patatin PFAM: Patatin~KEGG: saf:SULAZ_1087 patatin gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0352 Theam_0353 Theam_0353 Theam_0353 319596 319874 + acylphosphatase PFAM: acylphosphatase~KEGG: fpl:Ferp_1517 acylphosphatase gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0353 Theam_0354 Theam_0354 Theam_0354 319849 320901 + Peptidase M23 KEGG: pmx:PERMA_1851 lipoprotein~PFAM: Peptidase M23%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0354 Theam_0355 Theam_0355 Theam_0355 321813 323255 - cation transporter PFAM: cation transporter~KEGG: pmx:PERMA_1271 trk system%2C membrane component gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0355 Theam_0356 Theam_0356 Theam_0356 323259 324554 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B TrkA-C domain protein~KEGG: pmx:PERMA_1272 TrkA-N domain family protein gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0356 Theam_0357 Theam_0357 Theam_0357 324611 325621 - cytochrome c-type biogenesis protein CcsB KEGG: dal:Dalk_1266 cytochrome c-type biogenesis protein CcsB~TIGRFAM: cytochrome c-type biogenesis protein CcsB~PFAM: cytochrome c assembly protein gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0357 Theam_0358 Theam_0358 Theam_0358 325618 326949 - ResB family protein KEGG: gur:Gura_3842 ResB family protein gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0358 Theam_0359 Theam_0359 Theam_0359 326996 328120 - amidohydrolase PFAM: amidohydrolase~KEGG: gem:GM21_1241 amidohydrolase gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0359 Theam_0360 Theam_0360 Theam_0360 328104 329546 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: Polynucleotide adenylyltransferase region%3B metal-dependent phosphohydrolase HD sub domain~KEGG: aae:aq_2158 poly A polymerase~SMART: metal-dependent phosphohydrolase HD region gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0360 Theam_0361 Theam_0361 Theam_0361 329567 330238 + ABC transporter related protein KEGG: pmx:PERMA_1738 lipoprotein-releasing system ATP-binding protein LolD~PFAM: ABC transporter related~SMART: AAA ATPase gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0361 Theam_0362 Theam_0362 Theam_0362 330266 332740 + ATPase AAA-2 domain protein KEGG: saf:SULAZ_0309 negative regulator of genetic competence ClpC/MecB~PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B Clp domain protein%3B Clp ATPase-like~SMART: AAA ATPase gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0362 Theam_0363 Theam_0363 Theam_0363 332737 333456 + protein of unknown function DUF558 PFAM: protein of unknown function DUF558~KEGG: sde:Sde_0467 PAS/PAC sensor signal transduction histidine kinase gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0363 Theam_0364 Theam_0364 Theam_0364 333388 333552 - hypothetical protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0364 Theam_0365 Theam_0365 Theam_0365 333606 334157 + Appr-1-p processing domain protein KEGG: dth:DICTH_1609 hypothetical protein~PFAM: Appr-1-p processing domain protein~SMART: Appr-1-p processing domain protein gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0365 Theam_0366 Theam_0366 Theam_0366 334271 336244 + methyl-accepting chemotaxis sensory transducer KEGG: tdn:Suden_0209 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0366 Theam_0367 Theam_0367 Theam_0367 336234 336626 - HEPN domain protein PFAM: HEPN domain protein~KEGG: mvu:Metvu_1045 hypothetical protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0367 Theam_0368 Theam_0368 Theam_0368 336616 336909 - hypothetical protein KEGG: aac:Aaci_3143 hypothetical protein gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0368 Theam_0369 Theam_0369 Theam_0369 336962 337906 - pseudouridine synthase%2C RluA family TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~KEGG: aae:aq_1758 hypothetical protein~SMART: RNA-binding S4 domain protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0369 Theam_0370 Theam_0370 Theam_0370 337972 338145 + protein of unknown function DUF329 PFAM: protein of unknown function DUF329~KEGG: tye:THEYE_A1648 putative zinc-binding protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0370 Theam_0371 Theam_0371 Theam_0371 338117 340699 + DNA mismatch repair protein MutS TIGRFAM: DNA mismatch repair protein MutS~PFAM: MutS III domain protein%3B DNA mismatch repair protein MutS domain protein%3B MutS II domain protein%3B MutS IV domain protein~KEGG: pmx:PERMA_0758 DNA mismatch repair protein MutS~SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0371 Theam_0372 Theam_0372 Theam_0372 340683 341186 - protein of unknown function DUF996 PFAM: protein of unknown function DUF996~KEGG: pfu:PF1494 hypothetical protein gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0372 Theam_0373 Theam_0373 Theam_0373 341183 342787 - 2-isopropylmalate synthase/homocitrate synthase family protein KEGG: tnp:Tnap_0332 2-isopropylmalate synthase/homocitrate synthase family protein~TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerisation) domain-containing protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0373 Theam_0374 Theam_0374 Theam_0374 342798 344018 - aspartate kinase KEGG: saf:SULAZ_1497 asparate kinase%2C monofunctional class~TIGRFAM: aspartate kinase%3B aspartate kinase%2C monofunctional class~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0374 Theam_0375 Theam_0375 Theam_0375 344110 345333 + molybdenum cofactor synthesis domain protein KEGG: aae:aq_030 molybdenum cofactor biosynthesis protein A~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MoeA domain protein domain I and II%3B molybdopterin binding domain%3B MoeA domain protein domain IV gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0375 Theam_0376 Theam_0376 Theam_0376 345328 347337 - Aldehyde ferredoxin oxidoreductase KEGG: ton:TON_1498 tungsten-containing glyceraldehyde-3-phosphate:ferredoxin oxidoreductase~PFAM: Aldehyde ferredoxin oxidoreductase %3B aldehyde ferredoxin oxidoreductase~SMART: Aldehyde ferredoxin oxidoreductase gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0376 Theam_0377 Theam_0377 Theam_0377 347408 348457 - N-acetyl-gamma-glutamyl-phosphate reductase TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~KEGG: pth:PTH_0501 N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerisation region gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0377 Theam_0378 Theam_0378 Theam_0378 348429 348839 - ribosomal protein S9 PFAM: ribosomal protein S9~KEGG: pmx:PERMA_0430 30S ribosomal protein S9 gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0378 Theam_0379 Theam_0379 Theam_0379 348851 349279 - ribosomal protein L13 KEGG: aae:aq_1877 50S ribosomal protein L13~TIGRFAM: ribosomal protein L13~PFAM: ribosomal protein L13 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0379 Theam_0380 Theam_0380 Theam_0380 349872 350159 + hypothetical protein KEGG: ptm:GSPATT00032959001 hypothetical protein gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0380 Theam_0381 Theam_0381 Theam_0381 350279 351307 - heat-inducible transcription repressor HrcA KEGG: sfu:Sfum_1034 heat-inducible transcription repressor HrcA~TIGRFAM: heat-inducible transcription repressor HrcA~PFAM: Winged helix-turn-helix transcription repressor%2C HrcA-like gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0381 Theam_0382 Theam_0382 Theam_0382 351319 351834 - hypothetical protein KEGG: dap:Dacet_1433 hypothetical protein gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0382 Theam_0383 Theam_0383 Theam_0383 352012 352332 + hypothetical protein KEGG: mca:MCA0426 cytochrome c family protein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0383 Theam_0384 Theam_0384 Theam_0384 352447 354771 + hypothetical protein KEGG: tin:Tint_2638 cytochrome c family protein gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0384 Theam_0385 Theam_0385 Theam_0385 354867 355535 + ribulose-phosphate 3-epimerase TIGRFAM: ribulose-phosphate 3-epimerase~KEGG: pmx:PERMA_0635 ribulose-phosphate 3-epimerase~PFAM: ribulose-phosphate 3-epimerase gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0385 Theam_0386 Theam_0386 Theam_0386 355537 356487 + ribose-phosphate pyrophosphokinase TIGRFAM: ribose-phosphate pyrophosphokinase~KEGG: chy:CHY_0193 ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0386 Theam_0387 Theam_0387 Theam_0387 356477 357037 - hypothetical protein KEGG: cps:CPS_4585 general secretion pathway protein J gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0387 Theam_0388 Theam_0388 Theam_0388 357015 357341 - type II secretion system protein I KEGG: xac:XAC0700 type II secretion system protein I gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0388 Theam_0389 Theam_0389 Theam_0389 357371 358105 + pyridoxal phosphate biosynthetic protein PdxJ TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ~KEGG: cyb:CYB_0455 pyridoxine 5'-phosphate synthase~PFAM: Pyridoxal phosphate biosynthetic protein PdxJ gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0389 Theam_0390 Theam_0390 Theam_0390 358108 358473 + 4'-phosphopantetheinyl transferase PFAM: 4'-phosphopantetheinyl transferase~KEGG: saf:SULAZ_0185 holo-[acyl-carrier-protein] synthase gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0390 Theam_0391 Theam_0391 Theam_0391 358445 358882 - hemerythrin-like metal-binding protein KEGG: saf:SULAZ_0036 hypothetical protein~TIGRFAM: hemerythrin-like metal-binding protein~PFAM: Hemerythrin HHE cation binding domain protein gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0391 Theam_0392 Theam_0392 Theam_0392 359006 359239 - acyl carrier protein KEGG: min:Minf_0431 acyl carrier protein~TIGRFAM: acyl carrier protein~PFAM: phosphopantetheine-binding gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0392 Theam_0393 Theam_0393 Theam_0393 359290 360018 - 3-oxoacyl-(acyl-carrier-protein) reductase KEGG: pmx:PERMA_0507 3-oxoacyl-(acyl-carrier-protein) reductase~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase~PFAM: short-chain dehydrogenase/reductase SDR gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0393 Theam_0394 Theam_0394 Theam_0394 360046 360525 - hypothetical protein KEGG: aae:aq_1481 hypothetical protein gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0394 Theam_0395 Theam_0395 Theam_0395 360553 361233 + hypothetical protein KEGG: aae:aq_2093 thiol:disulfide interchange protein gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0395 Theam_0396 Theam_0396 Theam_0396 361196 363589 - diguanylate cyclase/phosphodiesterase with extracellular sensor TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B histidine kinase HAMP region domain protein~KEGG: saf:SULAZ_1249 diguanylate cyclase/phosphodiesterase~SMART: EAL domain protein%3B GGDEF domain containing protein%3B histidine kinase HAMP region domain protein gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0396 Theam_0397 Theam_0397 Theam_0397 363619 364260 - hypothetical protein KEGG: swo:Swol_2452 carbonic anhydrase-like protein gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0397 Theam_0398 Theam_0398 Theam_0398 364257 364742 - phosphodiesterase%2C MJ0936 family KEGG: trq:TRQ2_0718 phosphodiesterase~TIGRFAM: phosphodiesterase%2C MJ0936 family~PFAM: metallophosphoesterase gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0398 Theam_0399 Theam_0399 Theam_0399 364739 366835 - DNA topoisomerase I SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain-containing protein~TIGRFAM: DNA topoisomerase I~KEGG: pth:PTH_1246 topoisomerase IA~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein%3B DNA topoisomerase type IA zn finger domain protein gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0399 Theam_0400 Theam_0400 Theam_0400 366948 368072 + Conserved TM helix repeat-containing protein PFAM: Conserved TM helix repeat-containing protein~KEGG: pcr:Pcryo_2407 TM helix protein gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0400 Theam_0401 Theam_0401 Theam_0401 368405 368737 - hypothetical protein KEGG: tra:Trad_0176 ATP-dependent chaperone ClpB gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0401 Theam_0402 Theam_0402 Theam_0402 368851 369914 - pseudogene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0402 Theam_0403 Theam_0403 Theam_0403 369977 370483 + endodeoxyribonuclease RusA PFAM: endodeoxyribonuclease RusA~KEGG: pmx:PERMA_0652 crossover junction endodeoxyribonuclease RusA (Holliday junction nuclease RusA) (Holliday junction resolvase) gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0403 Theam_0404 Theam_0404 Theam_0404 370473 372032 + HI0933 family protein PFAM: HI0933 family protein~KEGG: chy:CHY_2013 hypothetical protein gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0404 Theam_0405 Theam_0405 Theam_0405 372021 373019 - protein of unknown function DUF475 PFAM: protein of unknown function DUF475~KEGG: abu:Abu_1367 hypothetical protein gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0405 Theam_0406 Theam_0406 Theam_0406 372994 374010 - glycosyl transferase family 9 PFAM: glycosyl transferase family 9~KEGG: pmx:PERMA_0525 ADP-heptose:LPS heptosyltransferase gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0406 Theam_0407 Theam_0407 Theam_0407 374007 374183 - Rubredoxin-type Fe(Cys)4 protein PFAM: Rubredoxin-type Fe(Cys)4 protein~KEGG: tpe:Tpen_1457 rubredoxin-type Fe(Cys)4 protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0407 Theam_0408 Theam_0408 Theam_0408 374270 374707 + hypothetical protein KEGG: pno:SNOG_00987 hypothetical protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0408 Theam_0409 Theam_0409 Theam_0409 374710 374997 + protein of unknown function DUF503 PFAM: protein of unknown function DUF503~KEGG: hau:Haur_3704 hypothetical protein gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0409 Theam_0410 Theam_0410 Theam_0410 375129 375710 + transcriptional regulator%2C LuxR family KEGG: geo:Geob_2600 transcriptional regulator%2C LuxR family~PFAM: regulatory protein LuxR~SMART: regulatory protein LuxR gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0410 Theam_0411 Theam_0411 Theam_0411 375685 376509 - DNA polymerase III%2C delta prime subunit KEGG: gsu:GSU2230 DNA polymerase III%2C delta prime subunit gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0411 Theam_0412 Theam_0412 Theam_0412 376494 377114 - thymidylate kinase TIGRFAM: thymidylate kinase~KEGG: saf:SULAZ_0257 thymidylate kinase~PFAM: thymidylate kinase gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0412 Theam_0413 Theam_0413 Theam_0413 377115 378293 - sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: pmx:PERMA_1094 sodium/hydrogen exchanger gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0413 Theam_0414 Theam_0414 Theam_0414 378293 378787 - TrkA-C domain protein PFAM: TrkA-C domain protein~KEGG: saf:SULAZ_0946 TrkA-C gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0414 Theam_0415 Theam_0415 Theam_0415 378788 379393 - hypothetical protein KEGG: sul:SYO3AOP1_0137 hypothetical protein gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0415 Theam_0416 Theam_0416 Theam_0416 379383 380198 - Radical SAM domain protein KEGG: aae:aq_1528 hypothetical protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0416 Theam_0417 Theam_0417 Theam_0417 380182 381096 - PSP1 domain protein PFAM: PSP1 domain protein~KEGG: afl:Aflv_0027 regulator of signaling phosphorelay (PSP1/tpl family) gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0417 Theam_0418 Theam_0418 Theam_0418 381311 382687 + hypothetical protein KEGG: swd:Swoo_4755 hypothetical protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0418 Theam_0419 Theam_0419 Theam_0419 382764 383666 + hypothetical protein KEGG: tcx:Tcr_0522 TPR repeat-containing protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0419 Theam_0420 Theam_0420 Theam_0420 383659 384168 + hypothetical protein KEGG: dtu:Dtur_1384 TPR repeat-containing protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0420 Theam_0421 Theam_0421 Theam_0421 384250 384813 + NapC/NirT cytochrome c domain protein PFAM: NapC/NirT cytochrome c domain protein~KEGG: pmx:PERMA_1457 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0421 Theam_0422 Theam_0422 Theam_0422 384841 385257 + hypothetical protein KEGG: dap:Dacet_0085 hypothetical protein gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0422 Theam_0423 Theam_0423 Theam_0423 385275 387923 + molybdopterin oxidoreductase PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~KEGG: ddf:DEFDS_1820 periplasmic nitrate reductase NapA gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0423 Theam_0424 Theam_0424 Theam_0424 388011 388376 + hypothetical protein KEGG: msu:MS2282 NapD protein gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0424 Theam_0425 Theam_0425 Theam_0425 388357 389031 + ferredoxin-type protein NapG KEGG: ppr:PBPRB0649 ferredoxin-type protein NapG gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0425 Theam_0426 Theam_0426 Theam_0426 389043 389906 + hypothetical protein KEGG: dap:Dacet_0089 NapH gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0426 Theam_0427 Theam_0427 Theam_0427 389989 390243 + hypothetical protein KEGG: hya:HY04AAS1_1020 hypothetical protein gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0427 Theam_0428 Theam_0428 Theam_0428 390231 390965 - putative transcriptional acitvator%2C Baf family KEGG: fno:Fnod_1166 pantothenate kinase~TIGRFAM: transcriptional activator%2C Baf family~PFAM: Bvg accessory factor gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0428 Theam_0429 Theam_0429 Theam_0429 390946 392118 - arginine biosynthesis bifunctional protein ArgJ TIGRFAM: arginine biosynthesis bifunctional protein ArgJ~KEGG: tye:THEYE_A1523 arginine biosynthesis bifunctional protein ArgJ~PFAM: arginine biosynthesis protein ArgJ gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0429 Theam_0430 Theam_0430 Theam_0430 392178 393266 + tRNA (guanine-N1-)-methyltransferase PFAM: tRNA (guanine-N1-)-methyltransferase~KEGG: pfu:PF0678 hypothetical protein gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0430 Theam_0431 Theam_0431 Theam_0431 393238 394149 + cysteine synthase KEGG: dth:DICTH_1733 cysteine synthase A~TIGRFAM: cysteine synthase%3B cysteine synthase A~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0431 Theam_0432 Theam_0432 Theam_0432 394158 395159 + hypothetical protein KEGG: fal:FRAAL3512 putative fatty-acid--CoA ligase gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0432 Theam_0433 Theam_0433 Theam_0433 395151 395531 - hypothetical protein KEGG: dhd:Dhaf_0400 FAD-dependent thymidylate synthase gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0433 Theam_0434 Theam_0434 Theam_0434 395533 395739 - ribosomal protein L31 KEGG: tye:THEYE_A0367 ribosomal protein L31~TIGRFAM: ribosomal protein L31~PFAM: ribosomal protein L31 gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0434 Theam_0435 Theam_0435 Theam_0435 395811 396446 + SNARE associated Golgi protein-like protein PFAM: SNARE associated Golgi protein~KEGG: cbl:CLK_2841 DedA family membrane protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0435 Theam_0436 Theam_0436 Theam_0436 396418 397212 + tryptophan synthase%2C alpha subunit TIGRFAM: tryptophan synthase%2C alpha subunit~KEGG: pmx:PERMA_1327 tryptophan synthase subunit alpha~PFAM: tryptophan synthase alpha chain gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0436 Theam_0437 Theam_0437 Theam_0437 397235 397474 + twin-arginine translocation protein%2C TatA/E family subunit KEGG: dba:Dbac_2495 twin-arginine translocation protein%2C TatB subunit~TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: sec-independent translocation protein mttA/Hcf106 gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0437 Theam_0438 Theam_0438 Theam_0438 397476 398234 + Sec-independent protein translocase%2C TatC subunit KEGG: sat:SYN_00305 sec-independent protein translocase protein~TIGRFAM: Sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0438 Theam_0439 Theam_0439 Theam_0439 398264 399535 + transcription termination factor Rho TIGRFAM: transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor RNA-binding%3B Rho termination factor domain protein~KEGG: aae:aq_873 transcription termination factor Rho~SMART: Cold shock protein%3B AAA ATPase gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0439 Theam_0440 Theam_0440 Theam_0440 399532 400140 + phosphoheptose isomerase KEGG: pmx:PERMA_1830 phosphoheptose isomerase~TIGRFAM: phosphoheptose isomerase~PFAM: sugar isomerase (SIS) gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0440 Theam_0441 Theam_0441 Theam_0441 400217 401011 + predicted phospho-2-dehydro-3-deoxyheptonate aldolase TIGRFAM: predicted phospho-2-dehydro-3-deoxyheptonate aldolase~KEGG: aae:aq_1554 fructose-bisphosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0441 Theam_0442 Theam_0442 Theam_0442 401030 402712 - Radical SAM domain protein KEGG: mev:Metev_1381 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0442 Theam_0443 Theam_0443 Theam_0443 402693 403862 - sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: pmx:PERMA_0591 hypothetical protein gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0443 Theam_0444 Theam_0444 Theam_0444 403864 405267 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B TrkA-C domain protein%3B UspA domain-containing protein~KEGG: pmx:PERMA_0592 TrkA-N domain family protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0444 Theam_0445 Theam_0445 Theam_0445 405423 406157 + ABC transporter related protein KEGG: mfe:Mefer_1235 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0445 Theam_0446 Theam_0446 Theam_0446 406157 407107 + SufBD protein PFAM: SufBD protein~KEGG: hor:Hore_18100 SufBD protein gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0446 Theam_0447 Theam_0447 Theam_0447 407132 407467 + Desulfoferrodoxin ferrous iron-binding region protein PFAM: Desulfoferrodoxin ferrous iron-binding region~KEGG: fno:Fnod_0468 desulfoferrodoxin ferrous iron-binding region gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0447 Theam_0448 Theam_0448 Theam_0448 407445 408086 - riboflavin synthase%2C alpha subunit TIGRFAM: riboflavin synthase%2C alpha subunit~KEGG: hth:HTH_0369 riboflavin synthase alpha chain~PFAM: Lumazine-binding protein gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0448 Theam_0449 Theam_0449 Theam_0449 408138 409049 + Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: sul:SYO3AOP1_0810 Ppx/GppA phosphatase gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0449 Theam_0450 Theam_0450 Theam_0450 409043 410380 + nucleotide sugar dehydrogenase TIGRFAM: nucleotide sugar dehydrogenase~KEGG: chl:Chy400_3087 nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0450 Theam_0451 Theam_0451 Theam_0451 410381 411004 + CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: aae:aq_1244 hypothetical protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0451 Theam_0452 Theam_0452 Theam_0452 411006 411668 + 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase TIGRFAM: 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase~KEGG: aae:aq_436 riboflavin specific deaminase~PFAM: bifunctional deaminase-reductase domain protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0452 Theam_0453 Theam_0453 Theam_0453 411672 412661 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: pmx:PERMA_1039 oligopeptide transport system permease protein AppB gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0453 Theam_0454 Theam_0454 Theam_0454 412651 413721 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: pmx:PERMA_1038 oligopeptide transport system permease protein AppC gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0454 Theam_0455 Theam_0455 Theam_0455 413723 414802 + phospho-N-acetylmuramoyl-pentapeptide-transferase KEGG: gbm:Gbem_0488 phospho-N-acetylmuramoyl-pentapeptide-transferase~TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase~PFAM: Glycosyl transferase%2C family 4%2C conserved region%3B Phospho-N-acetylmuramoyl-pentapeptide transferase%2C conserved site gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0455 Theam_0456 Theam_0456 Theam_0456 414755 415093 - regulatory protein ArsR KEGG: tko:TK1041 ArsR family transcriptional regulator~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0456 Theam_0457 Theam_0457 Theam_0457 415144 415794 + serine O-acetyltransferase TIGRFAM: serine O-acetyltransferase~KEGG: tmt:Tmath_1941 serine O-acetyltransferase gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0457 Theam_0458 Theam_0458 Theam_0458 415791 416738 + Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: aae:aq_1689 hypothetical protein gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0458 Theam_0459 Theam_0459 Theam_0459 416750 417757 - ketol-acid reductoisomerase TIGRFAM: ketol-acid reductoisomerase~KEGG: pmx:PERMA_0155 ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein%3B acetohydroxy acid isomeroreductase gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0459 Theam_0460 Theam_0460 Theam_0460 417779 418297 - acetolactate synthase%2C small subunit KEGG: saf:SULAZ_0083 acetolactate synthase%2C small subunit~TIGRFAM: acetolactate synthase%2C small subunit~PFAM: Acetolactate synthase%2C small subunit-like%3B amino acid-binding ACT domain protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0460 Theam_0461 Theam_0461 Theam_0461 418307 420046 - acetolactate synthase%2C large subunit%2C biosynthetic type KEGG: hth:HTH_0637 acetolactate synthase large subunit~TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate TPP-binding domain-containing protein%3B thiamine pyrophosphate central domain-containing protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0461 Theam_0462 Theam_0462 Theam_0462 420134 421420 + Anthranilate synthase KEGG: bcq:BCQ_0078 anthranilate synthase%2C component I (para-aminobenzoate synthase)~PFAM: Chorismate binding-like%3B Anthranilate synthase component I domain protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0462 Theam_0463 Theam_0463 Theam_0463 421421 421654 - hypothetical protein KEGG: tal:Thal_0329 hypothetical protein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0463 Theam_0464 Theam_0464 Theam_0464 421726 422559 - KpsF/GutQ family protein TIGRFAM: KpsF/GutQ family protein~PFAM: sugar isomerase (SIS)%3B CBS domain containing protein~KEGG: pmx:PERMA_0165 arabinose 5-phosphate isomerase~SMART: CBS domain containing protein gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0464 Theam_0465 Theam_0465 Theam_0465 422609 423505 - peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: slt:Slit_0344 peptidase M48 Ste24p gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0465 Theam_0466 Theam_0466 Theam_0466 423538 424836 + RNA polymerase%2C sigma 54 subunit%2C RpoN KEGG: hor:Hore_15850 RNA polymerase%2C sigma 54 subunit%2C RpoN~TIGRFAM: RNA polymerase sigma-54 factor%2C RpoN~PFAM: sigma-54 DNA-binding domain protein%3B sigma-54 factor core-binding region gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0466 Theam_0467 Theam_0467 Theam_0467 424833 427484 + (Glutamate--ammonia-ligase) adenylyltransferase KEGG: pmx:PERMA_0170 glutamate ammonia ligase adenylyl-transferase~PFAM: glutamate-ammonia ligase adenylyltransferase%3B GlnD PII-uridylyltransferase gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0467 Theam_0468 Theam_0468 Theam_0468 427460 428065 + hypothetical protein KEGG: ehi:EHI_138050 hypothetical protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0468 Theam_0469 Theam_0469 Theam_0469 428031 428705 + tyrosine protein kinase KEGG: mvu:Metvu_0161 tyrosine protein kinase gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0469 Theam_0470 Theam_0470 Theam_0470 428768 428929 + ribosomal protein L34 KEGG: tro:trd_1088 ribosomal protein L34~TIGRFAM: ribosomal protein L34~PFAM: ribosomal protein L34 gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0470 Theam_0471 Theam_0471 Theam_0471 428914 429282 + ribonuclease P protein component KEGG: pth:PTH_2920 RNase P protein component~TIGRFAM: ribonuclease P protein component~PFAM: ribonuclease P protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0471 Theam_0472 Theam_0472 Theam_0472 429279 429485 + protein of unknown function DUF37 PFAM: protein of unknown function DUF37~KEGG: saf:SULAZ_0536 hypothetical protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0472 Theam_0473 Theam_0473 Theam_0473 429496 430968 + membrane protein insertase%2C YidC/Oxa1 family KEGG: saf:SULAZ_0535 60 kDa inner-membrane protein~TIGRFAM: membrane protein insertase%2C YidC/Oxa1 family%3B membrane protein insertase%2C YidC/Oxa1 family domain containing~PFAM: 60 kDa inner membrane insertion protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0473 Theam_0474 Theam_0474 Theam_0474 430974 432245 + protein of unknown function DUF21 PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~KEGG: aae:aq_2120 hemolysin homolog protein gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0474 Theam_0475 Theam_0475 Theam_0475 432245 433495 + protein of unknown function DUF21 KEGG: hoh:Hoch_2560 protein of unknown function DUF21~PFAM: protein of unknown function DUF21%3B CBS domain containing protein%3B transporter-associated region~SMART: CBS domain containing protein gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0475 Theam_0476 Theam_0476 Theam_0476 433847 434257 - NADH-ubiquinone oxidoreductase 23 kda subunit KEGG: nam:NAMH_0635 NADH-ubiquinone oxidoreductase 23 kda subunit gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0476 Theam_0477 Theam_0477 Theam_0477 434254 434556 - hypothetical protein KEGG: hms:HMU06290 hypothetical protein gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0477 Theam_0478 Theam_0478 Theam_0478 434579 435664 - NADH dehydrogenase (quinone) manually curated~KEGG: nam:NAMH_0634 Ech hydrogenase%2C subunit~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa%3B nickel-dependent hydrogenase large subunit gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0478 Theam_0479 Theam_0479 Theam_0479 435666 436010 - putative quinone oxidoreductase subunit KEGG: nam:NAMH_0633 putative F420H2:quinone oxidoreductase%2C 39.7 kDa subunit gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0479 Theam_0480 Theam_0480 Theam_0480 435991 436524 - NADH ubiquinone oxidoreductase 20 kDa subunit PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit~KEGG: nam:NAMH_0632 hydrogenase-4 component I gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0480 Theam_0481 Theam_0481 Theam_0481 436525 437367 - respiratory-chain NADH dehydrogenase subunit 1 PFAM: respiratory-chain NADH dehydrogenase subunit 1~KEGG: nam:NAMH_0631 EchB gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0481 Theam_0482 Theam_0482 Theam_0482 437364 439223 - NADH/Ubiquinone/plastoquinone (complex I) PFAM: NADH/Ubiquinone/plastoquinone (complex I)~KEGG: nam:NAMH_0630 hydrogenase%2C EchA subunit gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0482 Theam_0483 Theam_0483 Theam_0483 439211 439696 - putative transcriptional regulator%2C Crp/Fnr family KEGG: gme:Gmet_0092 Crp/FNR family transcriptional regulator~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0483 Theam_0484 Theam_0484 Theam_0484 439759 441000 - nickel-dependent hydrogenase large subunit PFAM: nickel-dependent hydrogenase large subunit~KEGG: nhl:Nhal_1537 nickel-dependent hydrogenase large subunit gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0484 Theam_0485 Theam_0485 Theam_0485 440984 441757 - NADH ubiquinone oxidoreductase 20 kDa subunit PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit~KEGG: pab:PAB1786 cytochrome-c3 hydrogenase delta chain gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0485 Theam_0486 Theam_0486 Theam_0486 441758 442636 - Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulfur cluster binding domain protein PFAM: Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulphur cluster binding domain%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: ele:Elen_1254 oxidoreductase FAD/NAD(P)-binding domain protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0486 Theam_0487 Theam_0487 Theam_0487 442605 443672 - cytochrome-c3 hydrogenase alpha chain KEGG: pho:PH1290 cytochrome-c3 hydrogenase alpha chain gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0487 Theam_0488 Theam_0488 Theam_0488 443844 444335 + pantetheine-phosphate adenylyltransferase TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~KEGG: tmt:Tmath_1343 pantetheine-phosphate adenylyltransferase~PFAM: cytidylyltransferase gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0488 Theam_0489 Theam_0489 Theam_0489 444358 445791 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: aae:aq_186 aldehyde dehydrogenase gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0489 Theam_0490 Theam_0490 Theam_0490 445793 446515 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: sul:SYO3AOP1_1287 metallophosphoesterase gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0490 Theam_0491 Theam_0491 Theam_0491 446542 447456 + tRNA synthetase class II (D K and N) PFAM: tRNA synthetase class II (D K and N)~KEGG: glo:Glov_1914 tRNA synthetase class II (D K and N) gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0491 Theam_0492 Theam_0492 Theam_0492 447416 448009 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KEGG: pho:PH1014 aromatic acid decarboxylase~TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase~PFAM: flavoprotein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0492 Theam_0493 Theam_0493 Theam_0493 448074 448952 + acetylglutamate kinase TIGRFAM: acetylglutamate kinase~KEGG: dap:Dacet_0443 acetylglutamate kinase~PFAM: aspartate/glutamate/uridylate kinase gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0493 Theam_0494 Theam_0494 Theam_0494 449051 450451 + cytochrome bd ubiquinol oxidase subunit I PFAM: cytochrome bd ubiquinol oxidase subunit I~KEGG: ddf:DEFDS_1619 cytochrome bd oxidase subunit I gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0494 Theam_0495 Theam_0495 Theam_0495 450467 451666 + cytochrome d ubiquinol oxidase%2C subunit II KEGG: bmt:BSUIS_B0508 cytochrome d ubiquinol oxidase%2C subunit II~TIGRFAM: cytochrome d ubiquinol oxidase%2C subunit II~PFAM: cytochrome bd ubiquinol oxidase subunit II gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0495 Theam_0496 Theam_0496 Theam_0496 451801 452214 + hypothetical protein KEGG: ppp:PHYPADRAFT_84996 hypothetical protein gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0496 Theam_0497 Theam_0497 Theam_0497 452195 452296 + hypothetical protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0497 Theam_0498 Theam_0498 Theam_0498 452293 453915 - Fibronectin-binding A domain protein PFAM: Fibronectin-binding A domain protein%3B protein of unknown function DUF814~KEGG: bmq:BMQ_4247 fibronectin-binding protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0498 Theam_0499 Theam_0499 Theam_0499 453915 455339 - hypothetical protein KEGG: aae:aq_276 hypothetical protein gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0499 Theam_0500 Theam_0500 Theam_0500 455332 455568 - RNA chaperone Hfq KEGG: zmn:Za10_0891 RNA-binding protein Hfq~TIGRFAM: RNA chaperone Hfq~PFAM: Like-Sm ribonucleoprotein core gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0500 Theam_0501 Theam_0501 Theam_0501 455614 456537 - tRNA delta(2)-isopentenylpyrophosphate transferase TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase~KEGG: saf:SULAZ_0970 tRNA delta(2)-isopentenylpyrophosphate transferase~PFAM: tRNA isopentenyltransferase gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0501 Theam_0502 Theam_0502 Theam_0502 456583 458037 - glutamyl-tRNA synthetase KEGG: pmx:PERMA_1911 glutamyl-tRNA synthetase~TIGRFAM: glutamyl-tRNA synthetase~PFAM: Glutamyl/glutaminyl-tRNA synthetase%2C class Ic%2C catalytic domain gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0502 Theam_0503 Theam_0503 Theam_0503 458092 458370 + type III secretion exporter PFAM: type III secretion exporter~KEGG: pmx:PERMA_0112 flagellar biosynthetic protein FlhB gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0503 Theam_0504 Theam_0504 Theam_0504 458348 458620 - Anti-sigma-28 factor FlgM family protein PFAM: Anti-sigma-28 factor FlgM family protein~KEGG: cdf:CD0229 negative regulator of flagellin synthesis (anti-sigma-D factor) gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0504 Theam_0505 Theam_0505 Theam_0505 458712 459434 - Uroporphyrinogen III synthase HEM4 PFAM: Uroporphyrinogen III synthase HEM4~KEGG: pmx:PERMA_1098 uroporphyrinogen-III synthase gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0505 Theam_0506 Theam_0506 Theam_0506 459425 460360 - porphobilinogen deaminase KEGG: pmx:PERMA_0444 porphobilinogen deaminase~TIGRFAM: porphobilinogen deaminase~PFAM: Porphobilinogen deaminase gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0506 Theam_0507 Theam_0507 Theam_0507 460364 461635 - glutamyl-tRNA reductase KEGG: dak:DaAHT2_2552 glutamyl-tRNA reductase~TIGRFAM: glutamyl-tRNA reductase~PFAM: Shikimate/quinate 5-dehydrogenase%3B Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0507 Theam_0508 Theam_0508 Theam_0508 461638 462456 - cytochrome c assembly protein PFAM: cytochrome c assembly protein~KEGG: gbm:Gbem_0406 cytochrome c-type biogenesis protein CcsB gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0508 Theam_0509 Theam_0509 Theam_0509 462465 463214 - 3-dehydroquinate dehydratase%2C type I TIGRFAM: 3-dehydroquinate dehydratase%2C type I~KEGG: sul:SYO3AOP1_1460 3-dehydroquinate dehydratase%2C type I~PFAM: dehydroquinase class I gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0509 Theam_0510 Theam_0510 Theam_0510 463216 463560 - protein of unknown function DUF190 PFAM: protein of unknown function DUF190~KEGG: nis:NIS_1373 hypothetical protein gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0510 Theam_0511 Theam_0511 Theam_0511 463560 465266 - type IV-A pilus assembly ATPase PilB KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB~TIGRFAM: type IV-A pilus assembly ATPase PilB~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0511 Theam_0512 Theam_0512 Theam_0512 465279 465932 - hypothetical protein KEGG: aae:aq_2056 hypothetical protein gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0512 Theam_0513 Theam_0513 Theam_0513 466064 467227 + cell wall hydrolase/autolysin KEGG: pfl:PFL_6176 N-acetylmuramoyl-L-alanine amidase~PFAM: cell wall hydrolase/autolysin~SMART: cell wall hydrolase/autolysin gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0513 Theam_0514 Theam_0514 Theam_0514 467227 468519 + 3-phosphoshikimate 1-carboxyvinyltransferase KEGG: hor:Hore_10370 3-phosphoshikimate 1-carboxyvinyltransferase~TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0514 Theam_0515 Theam_0515 Theam_0515 468477 468737 - hypothetical protein KEGG: tgo:TGME49_106310 structural maintenance of chromosome domain-containing protein gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0515 Theam_0516 Theam_0516 Theam_0516 468945 469208 + protein of unknown function DUF134 KEGG: cpc:Cpar_1279 protein of unknown function DUF134 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0516 Theam_0517 Theam_0517 Theam_0517 469205 470437 - peptidase U32 PFAM: peptidase U32~KEGG: cpr:CPR_1741 U32 family peptidase gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0517 Theam_0518 Theam_0518 Theam_0518 470483 471328 - hypothetical protein KEGG: bpy:Bphyt_7398 hypothetical protein gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0518 Theam_0519 Theam_0519 Theam_0519 471541 473223 + ATPase associated with various cellular activities AAA_5 KEGG: bbz:BbuZS7_0301 ATP-dependent protease ATP-binding subunit HslU~PFAM: ATPase associated with various cellular activities AAA_5%3B ATPase AAA-2 domain protein~SMART: AAA ATPase gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0519 Theam_0520 Theam_0520 Theam_0520 473282 474277 + Porphobilinogen synthase KEGG: pmx:PERMA_0460 delta-aminolevulinic acid dehydratase~PFAM: delta-aminolevulinic acid dehydratase gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0520 Theam_0521 Theam_0521 Theam_0521 474287 474637 + hypothetical protein KEGG: cal:CaO19.2885 DNA primase large subunit gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0521 Theam_0522 Theam_0522 Theam_0522 474641 475468 + beta-lactamase domain-containing protein KEGG: dak:DaAHT2_0789 beta-lactamase domain-containing protein gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0522 Theam_0523 Theam_0523 Theam_0523 475535 475762 + ribosomal protein S21 KEGG: pmx:PERMA_0135 30S ribosomal protein S21~TIGRFAM: ribosomal protein S21~PFAM: ribosomal protein S21 gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0523 Theam_0524 Theam_0524 Theam_0524 475776 476231 + hypothetical protein KEGG: tma:TM0690 hypothetical protein gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0524 Theam_0525 Theam_0525 Theam_0525 476416 478686 + MutS2 family protein TIGRFAM: MutS2 family protein~PFAM: Smr protein/MutS2%3B DNA mismatch repair protein MutS domain protein~KEGG: aae:aq_1242 DNA mismatch repair protein MutS~SMART: DNA mismatch repair protein MutS domain protein%3B MutS III domain protein%3B Smr protein/MutS2 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0525 Theam_0526 Theam_0526 Theam_0526 478748 479938 + acetylornithine and succinylornithine aminotransferase TIGRFAM: acetylornithine and succinylornithine aminotransferase~KEGG: mta:Moth_2287 acetylornithine aminotransferase~PFAM: aminotransferase class-III gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0526 Theam_0527 Theam_0527 Theam_0527 479925 481631 + hypothetical protein KEGG: mdo:100024199 similar to transforming%2C acidic coiled-coil containing protein 3 gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0527 Theam_0528 Theam_0528 Theam_0528 481619 481876 - glutaredoxin 2 KEGG: tme:Tmel_1645 glutaredoxin 2 gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0528 Theam_0529 Theam_0529 Theam_0529 481873 483426 - amino acid permease-associated region protein PFAM: amino acid permease-associated region~KEGG: nis:NIS_0790 amino acid transporter gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0529 Theam_0530 Theam_0530 Theam_0530 483426 484355 - 2-dehydropantoate 2-reductase TIGRFAM: 2-dehydropantoate 2-reductase~KEGG: ddf:DEFDS_2126 hypothetical protein~PFAM: Ketopantoate reductase ApbA/PanE domain protein gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0530 Theam_0531 Theam_0531 Theam_0531 484352 485017 - molybdopterin-guanine dinucleotide biosynthesis protein B TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B~KEGG: dps:DP1766 molybdopterin-guanine dinucleotide biosynthesis protein B gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0531 Theam_0532 Theam_0532 Theam_0532 485131 485574 + hypothetical protein KEGG: aga:AgaP_AGAP012386 AGAP012386-PA gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0532 Theam_0533 Theam_0533 Theam_0533 485571 487802 + PKD domain containing protein KEGG: cbe:Cbei_3836 peptidase C1A%2C papain~PFAM: PKD domain containing protein%3B peptidase C1A papain%3B YD repeat-containing protein~SMART: PKD domain containing protein%3B peptidase C1A papain gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0533 Theam_0534 Theam_0534 Theam_0534 487860 489512 - dihydroxy-acid dehydratase TIGRFAM: dihydroxy-acid dehydratase~KEGG: tye:THEYE_A0862 dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0534 Theam_0535 Theam_0535 Theam_0535 489502 489735 - protein of unknown function DUF465 PFAM: protein of unknown function DUF465~KEGG: tye:THEYE_A0863 hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0535 Theam_0536 Theam_0536 Theam_0536 489745 490182 - ribosomal-protein-alanine acetyltransferase KEGG: cpe:CPE2166 ribosomal-protein-alanine acetyltransferase~TIGRFAM: ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0536 Theam_0537 Theam_0537 Theam_0537 490154 490744 - peptidase M22 glycoprotease PFAM: peptidase M22 glycoprotease~KEGG: rer:RER_19170 hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0537 Theam_0538 Theam_0538 Theam_0538 490746 491513 - Prepilin peptidase KEGG: dol:Dole_1855 peptidase A24A domain-containing protein~PFAM: peptidase A24A domain protein%3B peptidase A24A prepilin type IV gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0538 Theam_0539 Theam_0539 Theam_0539 491513 492133 - hypothetical protein KEGG: ddi:DDB_G0289077 hypothetical protein gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0539 Theam_0540 Theam_0540 Theam_0540 492096 494384 - DEAD/DEAH box helicase domain protein KEGG: aae:aq_1328 hypothetical protein~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0540 Theam_0541 Theam_0541 Theam_0541 494434 494589 + hypothetical protein KEGG: dth:DICTH_1607 putative regulatory protein%2C FmdB family gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0541 Theam_0542 Theam_0542 Theam_0542 494642 494806 + hypothetical protein KEGG: aae:aq_064b hypothetical protein gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0542 Theam_0543 Theam_0543 Theam_0543 494865 496151 + membrane protein involved in aromatic hydrocarbon degradation PFAM: membrane protein involved in aromatic hydrocarbon degradation~KEGG: ddf:DEFDS_1469 long-chain fatty acid transport protein gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0543 Theam_0544 Theam_0544 Theam_0544 496170 498200 + hypothetical protein KEGG: ddf:DEFDS_1470 hypothetical protein gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0544 Theam_0545 Theam_0545 Theam_0545 498194 499132 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: dds:Ddes_1893 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~SMART: AAA ATPase gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0545 Theam_0546 Theam_0546 Theam_0546 499129 499584 - AIG2 family protein PFAM: AIG2 family protein~KEGG: dau:Daud_0807 hypothetical protein gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0546 Theam_0547 Theam_0547 Theam_0547 499706 499861 - hypothetical protein gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0547 Theam_0548 Theam_0548 Theam_0548 500079 501974 - acetate/CoA ligase KEGG: mhu:Mhun_0352 acetate--CoA ligase~TIGRFAM: acetate/CoA ligase~PFAM: AMP-dependent synthetase and ligase gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0548 Theam_0549 Theam_0549 Theam_0549 502027 504018 - excinuclease ABC%2C B subunit TIGRFAM: excinuclease ABC%2C B subunit~PFAM: helicase domain protein%3B type III restriction protein res subunit%3B UvrB/UvrC protein~KEGG: csc:Csac_1985 excinuclease ABC subunit B~SMART: DEAD-like helicase %3B helicase domain protein gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0549 Theam_0550 Theam_0550 Theam_0550 504168 505334 - transposase%2C IS605 OrfB family KEGG: mbu:Mbur_2016 transposase~TIGRFAM: transposase%2C IS605 OrfB family~PFAM: transposase IS605 OrfB%3B transposase IS891/IS1136/IS1341 family gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0550 Theam_0551 Theam_0551 Theam_0551 505426 508170 + Tetratricopeptide TPR_1 repeat-containing protein PFAM: Tetratricopeptide TPR_1 repeat-containing protein~KEGG: dsa:Desal_1948 hypothetical protein gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0551 Theam_0552 Theam_0552 Theam_0552 508170 508754 + protein of unknown function DUF507 PFAM: protein of unknown function DUF507~KEGG: saf:SULAZ_0295 hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0552 Theam_0553 Theam_0553 Theam_0553 508726 509028 + hypothetical protein KEGG: tal:Thal_0574 septum formation initiator gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0553 Theam_0554 Theam_0554 Theam_0554 509006 509494 + hypothetical protein KEGG: ptm:GSPATT00001131001 hypothetical protein gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0554 Theam_0555 Theam_0555 Theam_0555 509478 509759 + hypothetical protein KEGG: tgo:TGME49_078460 hypothetical protein gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0555 Theam_0556 Theam_0556 Theam_0556 509767 510114 - hypothetical protein KEGG: saf:SULAZ_1434 MacA gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0556 Theam_0557 Theam_0557 Theam_0557 510119 511264 - TrkA-N domain protein PFAM: TrkA-N domain protein%3B Ion transport 2 domain protein %3B TrkA-C domain protein~KEGG: aae:aq_303 hypothetical protein gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0557 Theam_0558 Theam_0558 Theam_0558 511276 512385 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: tgr:Tgr7_2043 hypothetical protein gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0558 Theam_0559 Theam_0559 Theam_0559 512339 513664 - MiaB-like tRNA modifying enzyme TIGRFAM: MiaB-like tRNA modifying enzyme%3B RNA modification enzyme%2C MiaB family~PFAM: protein of unknown function UPF0004 %3B Radical SAM domain protein~KEGG: pmx:PERMA_1953 hypothetical protein~SMART: Elongator protein 3/MiaB/NifB gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0559 Theam_0560 Theam_0560 Theam_0560 513746 513850 - hypothetical protein KEGG: ecb:100063938 hypothetical protein LOC100063938 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0560 Theam_0561 Theam_0561 Theam_0561 513905 514777 - Arsenite-transporting ATPase KEGG: hvo:HVO_2977 arsenical pump-driving ATPase gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0561 Theam_0562 Theam_0562 Theam_0562 514758 515021 - hypothetical protein KEGG: hla:Hlac_2713 hypothetical protein gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0562 Theam_0563 Theam_0563 Theam_0563 514996 515868 - lipid A biosynthesis acyltransferase PFAM: lipid A biosynthesis acyltransferase~KEGG: gbm:Gbem_0846 lipid A biosynthesis acyltransferase gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0563 Theam_0564 Theam_0564 Theam_0564 515816 516895 - tetraacyldisaccharide 4'-kinase TIGRFAM: tetraacyldisaccharide 4'-kinase~KEGG: tai:Taci_1284 tetraacyldisaccharide 4'-kinase~PFAM: Tetraacyldisaccharide-1-P 4'-kinase gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0564 Theam_0565 Theam_0565 Theam_0565 516883 518049 - Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein~KEGG: kva:Kvar_0128 three-deoxy-D-manno-octulosonic-acid transferase domain protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0565 Theam_0566 Theam_0566 Theam_0566 518049 518708 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: iho:Igni_0229 radical SAM domain-containing protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0566 Theam_0567 Theam_0567 Theam_0567 518705 518863 - hypothetical protein KEGG: mav:MAV_3874 hypothetical protein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0567 Theam_0568 Theam_0568 Theam_0568 518872 519384 - ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP~KEGG: slp:Slip_0757 cob(I)alamin adenosyltransferase gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0568 Theam_0569 Theam_0569 Theam_0569 519375 520466 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~KEGG: pth:PTH_1260 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0569 Theam_0570 Theam_0570 Theam_0570 520453 521685 - histidyl-tRNA synthetase TIGRFAM: histidyl-tRNA synthetase~KEGG: aae:aq_122 histidyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0570 Theam_0571 Theam_0571 Theam_0571 521657 522322 - phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: amd:AMED_0885 uracil phosphoribosyltransferase gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0571 Theam_0572 Theam_0572 Theam_0572 522319 522996 - hypothetical protein KEGG: tal:Thal_0878 tetratricopeptide TPR_2 repeat protein gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0572 Theam_0573 Theam_0573 Theam_0573 523060 525366 + diguanylate cyclase/phosphodiesterase TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein%3B Cache type 2 domain protein~KEGG: dap:Dacet_2328 diguanylate cyclase/phosphodiesterase~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0573 Theam_0574 Theam_0574 Theam_0574 525363 526196 + hypothetical protein KEGG: dak:DaAHT2_1092 hypothetical protein gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0574 Theam_0575 Theam_0575 Theam_0575 526189 529101 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: sul:SYO3AOP1_1565 glycosyl transferase family 2 gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0575 Theam_0576 Theam_0576 Theam_0576 529088 529900 + Methyltransferase type 12 PFAM: Methyltransferase type 12~KEGG: hya:HY04AAS1_1575 methyltransferase type 12 gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0576 Theam_0577 Theam_0577 Theam_0577 529903 530790 + glucose-1-phosphate thymidylyltransferase KEGG: saf:SULAZ_0360 glucose-1-phosphate thymidylyltransferase~TIGRFAM: glucose-1-phosphate thymidylyltransferase~PFAM: Nucleotidyl transferase gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0577 Theam_0578 Theam_0578 Theam_0578 530780 531343 + dTDP-4-dehydrorhamnose 3%2C5-epimerase TIGRFAM: dTDP-4-dehydrorhamnose 3%2C5-epimerase~KEGG: saf:SULAZ_0363 dTDP-4-dehydrorhamnose 3%2C5-epimerase~PFAM: dTDP-4-dehydrorhamnose 35-epimerase related gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0578 Theam_0579 Theam_0579 Theam_0579 531340 532335 + dTDP-glucose 4%2C6-dehydratase KEGG: hya:HY04AAS1_1572 dTDP-glucose 4%2C6-dehydratase~TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0579 Theam_0580 Theam_0580 Theam_0580 532332 533177 + dTDP-4-dehydrorhamnose reductase TIGRFAM: dTDP-4-dehydrorhamnose reductase~KEGG: saf:SULAZ_0365 dTDP-4-dehydrorhamnose reductase~PFAM: dTDP-4-dehydrorhamnose reductase gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0580 Theam_0581 Theam_0581 Theam_0581 533167 534072 - histone deacetylase superfamily PFAM: histone deacetylase superfamily~KEGG: aae:aq_2110 acetoin utilization protein gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0581 Theam_0582 Theam_0582 Theam_0582 534080 536230 - ribonuclease R TIGRFAM: ribonuclease R%3B VacB and RNase II family 3'-5' exoribonuclease~PFAM: ribonuclease II%3B Ribonuclease B OB region domain%3B Peptidase S24/S26A/S26B%2C conserved region%3B RNA binding S1 domain protein~KEGG: tte:TTE0983 exoribonuclease~SMART: Cold shock protein gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0582 Theam_0583 Theam_0583 Theam_0583 536220 536594 - TOPRIM domain-containing protein KEGG: sul:SYO3AOP1_1031 toprim domain protein~PFAM: TOPRIM domain-containing protein~SMART: Toprim sub domain-containing protein gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0583 Theam_0584 Theam_0584 Theam_0584 536603 537520 - hypothetical protein KEGG: mfe:Mefer_0414 hypothetical protein gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0584 Theam_0585 Theam_0585 Theam_0585 537517 538071 - C_GCAxxG_C_C family protein PFAM: C_GCAxxG_C_C family protein~KEGG: fpl:Ferp_1336 hypothetical protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0585 Theam_0586 Theam_0586 Theam_0586 538175 539464 - enolase TIGRFAM: enolase~KEGG: tmt:Tmath_1558 enolase~PFAM: Enolase-like gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0586 Theam_0587 Theam_0587 Theam_0587 539452 539928 - Uncharacterized protein family UPF0079%2C ATPase PFAM: Uncharacterised protein family UPF0079%2C ATPase~KEGG: cbe:Cbei_0469 hypothetical protein gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0587 Theam_0588 Theam_0588 Theam_0588 539909 540298 - Biopolymer transport protein ExbD/TolR PFAM: Biopolymer transport protein ExbD/TolR~KEGG: sat:SYN_01052 TolR protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0588 Theam_0589 Theam_0589 Theam_0589 540295 541458 - succinyldiaminopimelate transaminase KEGG: pmx:PERMA_0766 succinyldiaminopimelate transaminase~TIGRFAM: succinyldiaminopimelate transaminase~PFAM: aminotransferase class I and II gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0589 Theam_0590 Theam_0590 Theam_0590 541470 542252 - hypothetical protein KEGG: saf:SULAZ_0799 hypothetical protein gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0590 Theam_0591 Theam_0591 Theam_0591 542252 542728 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: nis:NIS_1538 peroxiredoxin family protein gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0591 Theam_0592 Theam_0592 Theam_0592 542852 543139 + ribosomal protein S20 KEGG: pmx:PERMA_0399 ribosomal protein S20~TIGRFAM: ribosomal protein S20~PFAM: ribosomal protein S20 gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0592 Theam_0593 Theam_0593 Theam_0593 543292 543936 + thiamine-phosphate pyrophosphorylase KEGG: pmx:PERMA_1410 thiamine-phosphate pyrophosphorylase~TIGRFAM: thiamine-phosphate pyrophosphorylase~PFAM: thiamine monophosphate synthase gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0593 Theam_0594 Theam_0594 Theam_0594 543893 545167 + hypothetical protein KEGG: vpr:Vpar_0020 O-antigen polymerase gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0594 Theam_0595 Theam_0595 Theam_0595 545121 546227 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: ddf:DEFDS_0332 glycosyl transferase gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0595 Theam_0596 Theam_0596 Theam_0596 546283 547398 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: dvu:DVU0561 glycosyl transferase%2C group 1 family protein gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0596 Theam_0597 Theam_0597 Theam_0597 547398 548207 + polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: tye:THEYE_A1550 xylanase/chitin deacetylase gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0597 Theam_0598 Theam_0598 Theam_0598 548218 549951 + ABC transporter related protein KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter~PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0598 Theam_0599 Theam_0599 Theam_0599 549937 550830 - glycosyl transferase family 9 PFAM: glycosyl transferase family 9~KEGG: dap:Dacet_1894 glycosyl transferase family 9 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0599 Theam_0600 Theam_0600 Theam_0600 550883 551962 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: aae:aq_2115 glucosyl transferase I gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0600 Theam_0601 Theam_0601 Theam_0601 551955 553268 + nucleotide sugar dehydrogenase KEGG: sul:SYO3AOP1_1757 nucleotide sugar dehydrogenase~TIGRFAM: nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0601 Theam_0602 Theam_0602 Theam_0602 553334 554275 + malate dehydrogenase%2C NAD-dependent KEGG: aba:Acid345_1951 malate dehydrogenase (NAD)~TIGRFAM: malate dehydrogenase%2C NAD-dependent~PFAM: Lactate/malate dehydrogenase gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0602 Theam_0603 Theam_0603 Theam_0603 554284 555129 + hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C alpha subunit~KEGG: amt:Amet_3413 fumarate hydratase~PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0603 Theam_0604 Theam_0604 Theam_0604 555157 555858 - Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: sul:SYO3AOP1_1705 methyltransferase type 11 gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0604 Theam_0605 Theam_0605 Theam_0605 555904 556974 + 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase KEGG: tte:TTE1400 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase~PFAM: IspG family protein gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0605 Theam_0606 Theam_0606 Theam_0606 556958 557293 + dihydroneopterin aldolase PFAM: dihydroneopterin aldolase~KEGG: pth:PTH_0204 dihydroneopterin aldolase gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0606 Theam_0607 Theam_0607 Theam_0607 557278 558354 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: pmx:PERMA_0932 signal transduction response regulator~SMART: GGDEF domain containing protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0607 Theam_0608 Theam_0608 Theam_0608 558351 558959 + protein of unknown function DUF208 PFAM: protein of unknown function DUF208~KEGG: adg:Adeg_1629 protein of unknown function DUF208 gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0608 Theam_0609 Theam_0609 Theam_0609 559004 561529 + homocysteine S-methyltransferase PFAM: homocysteine S-methyltransferase%3B dihydropteroate synthase DHPS%3B Methionine synthase B12-binding module cap domain protein%3B cobalamin B12-binding domain protein~KEGG: slp:Slip_0734 homocysteine S-methyltransferase gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0609 Theam_0610 Theam_0610 Theam_0610 561529 562086 + adenine phosphoribosyltransferase KEGG: gme:Gmet_1422 adenine phosphoribosyltransferase~TIGRFAM: adenine phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0610 Theam_0611 Theam_0611 Theam_0611 562106 563347 + 3-oxoacyl-(acyl-carrier-protein) synthase 2 KEGG: hya:HY04AAS1_0511 3-oxoacyl-(acyl-carrier-protein) synthase 2~TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2~PFAM: Beta-ketoacyl synthase gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0611 Theam_0612 Theam_0612 Theam_0612 563344 564054 + ribonuclease III SMART: ribonuclease III%3B double-stranded RNA binding domain protein~TIGRFAM: ribonuclease III~KEGG: saf:SULAZ_0055 ribonuclease III~PFAM: ribonuclease III%3B double-stranded RNA binding domain protein gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0612 Theam_0613 Theam_0613 Theam_0613 564038 564604 + maf protein KEGG: tal:Thal_0504 maf protein~TIGRFAM: maf protein~PFAM: Maf family protein gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0613 Theam_0614 Theam_0614 Theam_0614 564624 565346 + hypothetical protein KEGG: pfa:PF11_0207 conserved Plasmodium protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0614 Theam_0615 Theam_0615 Theam_0615 565343 566059 + response regulator receiver protein KEGG: pfa:PF10_0374 Pf11-1 protein~PFAM: response regulator receiver~SMART: response regulator receiver gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0615 Theam_0616 Theam_0616 Theam_0616 566063 566557 + 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase KEGG: swo:Swol_2360 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~TIGRFAM: 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase~PFAM: MECDP-synthase gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0616 Theam_0617 Theam_0617 Theam_0617 566551 566988 + beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ KEGG: gbm:Gbem_0842 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ~PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0617 Theam_0618 Theam_0618 Theam_0618 566988 567764 + acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase KEGG: lba:Lebu_1274 UDP-N-acetylglucosamine acyltransferase~TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0618 Theam_0619 Theam_0619 Theam_0619 567761 568573 + metallo-beta-lactamase family protein KEGG: det:DET1628 metallo-beta-lactamase family protein gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0619 Theam_0620 Theam_0620 Theam_0620 568573 569115 + Nucleoside-triphosphatase KEGG: tal:Thal_0164 protein of unknown function DUF265~PFAM: protein of unknown function DUF265 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0620 Theam_0621 Theam_0621 Theam_0621 569087 570091 + Hsp33 protein PFAM: Hsp33 protein~KEGG: aae:aq_2009 hypothetical protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0621 Theam_0622 Theam_0622 Theam_0622 570091 570612 + peptidase zinc-dependent PFAM: peptidase zinc-dependent~KEGG: nis:NIS_0681 hypothetical protein gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0622 Theam_0623 Theam_0623 Theam_0623 571985 572806 + hypothetical protein KEGG: cph:Cpha266_2053 hypothetical protein gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0623 Theam_0624 Theam_0624 Theam_0624 572793 573578 - Purine-nucleoside phosphorylase KEGG: clj:CLJU_c20750 purine nucleoside phosphorylase~PFAM: purine or other phosphorylase family 1 gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0624 Theam_0625 Theam_0625 Theam_0625 573581 575260 - hypothetical protein KEGG: dol:Dole_0012 integrin-like repeat-containing protein gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0625 Theam_0626 Theam_0626 Theam_0626 575360 576583 + ammonium transporter PFAM: ammonium transporter~KEGG: gbm:Gbem_3126 Rh family protein/ammonium transporter gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0626 Theam_0627 Theam_0627 Theam_0627 576711 577121 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: saf:SULAZ_0596 transcriptional regulator%2C Fur family gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0627 Theam_0628 Theam_0628 Theam_0628 577249 577587 + nitrogen regulatory protein P-II PFAM: nitrogen regulatory protein P-II~KEGG: pmx:PERMA_1585 nitrogen regulatory protein P-II gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0628 Theam_0629 Theam_0629 Theam_0629 577603 579021 + glutamine synthetase%2C type I KEGG: ddf:DEFDS_1474 glutamine synthetase type I~TIGRFAM: glutamine synthetase%2C type I~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0629 Theam_0630 Theam_0630 Theam_0630 579113 579721 + pseudogene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0630 Theam_0631 Theam_0631 Theam_0631 579718 580977 - diaminopimelate decarboxylase KEGG: tye:THEYE_A1133 diaminopimelate decarboxylase~TIGRFAM: diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2 gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0631 Theam_0632 Theam_0632 Theam_0632 580977 583448 - hypothetical protein KEGG: fpl:Ferp_1592 SMC domain protein gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0632 Theam_0633 Theam_0633 Theam_0633 583445 584308 - Prephenate dehydrogenase PFAM: Prephenate dehydrogenase~KEGG: hth:HTH_0664 prephenate dehydrogenase gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0633 Theam_0634 Theam_0634 Theam_0634 584311 584889 - class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein~KEGG: pth:PTH_0920 L-fuculose phosphate aldolase gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0634 Theam_0635 Theam_0635 Theam_0635 584962 585954 - histidine kinase HAMP region domain protein KEGG: nam:NAMH_1443 putative mcp-domain signal transduction protein~PFAM: histidine kinase HAMP region domain protein~SMART: histidine kinase HAMP region domain protein gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0635 Theam_0636 Theam_0636 Theam_0636 585944 586840 - hypothetical protein KEGG: dth:DICTH_1557 hypothetical protein gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0636 Theam_0637 Theam_0637 Theam_0637 587217 587578 - pseudogene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0637 Theam_0638 Theam_0638 Theam_0638 587589 588395 - protein of unknown function DUF178 PFAM: protein of unknown function DUF178~KEGG: dsa:Desal_1214 protein of unknown function DUF178 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0638 Theam_0639 Theam_0639 Theam_0639 588389 589318 - PP-loop domain protein PFAM: PP-loop domain protein~KEGG: aae:aq_1333 hypothetical protein gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0639 Theam_0640 Theam_0640 Theam_0640 589293 590270 - rfaE bifunctional protein KEGG: ddf:DEFDS_0511 ADP-heptose synthase~TIGRFAM: rfaE bifunctional protein~PFAM: PfkB domain protein gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0640 Theam_0641 Theam_0641 Theam_0641 590263 590931 - DNA repair protein RadC KEGG: adg:Adeg_1541 DNA repair protein RadC~TIGRFAM: DNA repair protein RadC~PFAM: DNA repair protein RadC gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0641 Theam_0642 Theam_0642 Theam_0642 590918 593728 - isoleucyl-tRNA synthetase KEGG: chy:CHY_0534 isoleucyl-tRNA synthetase~TIGRFAM: isoleucyl-tRNA synthetase gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0642 Theam_0643 Theam_0643 Theam_0643 593797 594120 + hypothetical protein KEGG: pdi:BDI_2781 putative glycosyltransferase gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0643 Theam_0644 Theam_0644 Theam_0644 594123 594521 - Rhodanese domain protein SMART: Rhodanese domain protein~KEGG: sun:SUN_1140 hypothetical protein gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0644 Theam_0645 Theam_0645 Theam_0645 594577 596163 - phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent TIGRFAM: phosphoglycerate mutase%2C 2%2C3-bisphosphoglycerate-independent~KEGG: pth:PTH_2720 phosphoglyceromutase~PFAM: BPG-independent PGAM domain protein%3B metalloenzyme domain protein gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0645 Theam_0646 Theam_0646 Theam_0646 596193 596957 - tRNA pseudouridine synthase A KEGG: hor:Hore_02450 pseudouridylate synthase I~TIGRFAM: tRNA pseudouridine synthase A~PFAM: Pseudouridine synthase I%2C TruA%2C alpha/beta domain gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0646 Theam_0647 Theam_0647 Theam_0647 597009 598151 + sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: tye:THEYE_A1811 Kef-type K+ transport system%2C membrane component gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0647 Theam_0648 Theam_0648 Theam_0648 598173 599234 + glutamate--cysteine ligase GCS2 PFAM: glutamate--cysteine ligase GCS2~KEGG: pmx:PERMA_0104 carboxylate-amine ligase Francci3_0693 gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0648 Theam_0649 Theam_0649 Theam_0649 599235 600743 + gamma-glutamyltransferase TIGRFAM: gamma-glutamyltransferase~KEGG: pmx:PERMA_0102 gamma-glutamyltransferase~PFAM: gamma-glutamyltranspeptidase gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0649 Theam_0650 Theam_0650 Theam_0650 600724 601176 + hypothetical protein KEGG: dal:Dalk_4230 conserved repeat domain protein gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0650 Theam_0651 Theam_0651 Theam_0651 601109 603733 - UTP-GlnB uridylyltransferase%2C GlnD SMART: metal-dependent phosphohydrolase HD region~TIGRFAM: protein-P-II uridylyltransferase~KEGG: saf:SULAZ_1071 protein-P-II uridylyltransferase~PFAM: GlnD PII-uridylyltransferase%3B metal-dependent phosphohydrolase HD sub domain%3B amino acid-binding ACT domain protein gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0651 Theam_0652 Theam_0652 Theam_0652 603730 604293 - phospholipase D/Transphosphatidylase SMART: phospholipase D/Transphosphatidylase~KEGG: hth:HTH_1822 putative endonuclease gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0652 Theam_0653 Theam_0653 Theam_0653 604293 604583 - preprotein translocase%2C SecG subunit KEGG: afr:AFE_2632 preprotein translocase%2C SecG subunit~TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0653 Theam_0654 Theam_0654 Theam_0654 604585 605559 - UDP-glucose 4-epimerase KEGG: pmx:PERMA_2007 UDP-glucose 4-epimerase~TIGRFAM: UDP-glucose 4-epimerase~PFAM: NAD-dependent epimerase/dehydratase gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0654 Theam_0655 Theam_0655 Theam_0655 605582 606328 - triosephosphate isomerase TIGRFAM: triosephosphate isomerase~KEGG: pth:PTH_2721 triosephosphate isomerase~PFAM: triosephosphate isomerase gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0655 Theam_0656 Theam_0656 Theam_0656 606340 607572 - ATP-dependent Clp protease%2C ATP-binding subunit ClpX TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: ATPase AAA-2 domain protein%3B Clp ATPase-like~KEGG: tal:Thal_0579 ATP-dependent Clp protease%2C ATP-binding subunit ClpX~SMART: AAA ATPase gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0656 Theam_0657 Theam_0657 Theam_0657 607715 608347 + N-(5'phosphoribosyl)anthranilate isomerase (PRAI) PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)~KEGG: gsu:GSU2378 N-(5'-phosphoribosyl)anthranilate isomerase gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0657 Theam_0658 Theam_0658 Theam_0658 608397 608897 + Ferritin Dps family protein PFAM: Ferritin Dps family protein~KEGG: plt:Plut_0582 bacterioferritin gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0658 Theam_0659 Theam_0659 Theam_0659 608894 609325 - pseudogene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0659 Theam_0660 Theam_0660 Theam_0660 609381 610187 + lipopolysaccharide biosynthesis protein PFAM: lipopolysaccharide biosynthesis protein~KEGG: pmx:PERMA_0007 chain length determinant protein gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0660 Theam_0661 Theam_0661 Theam_0661 610184 611974 - aspartyl-tRNA synthetase KEGG: aae:aq_1677 aspartyl-tRNA synthetase~TIGRFAM: aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type%3B GAD domain protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0661 Theam_0662 Theam_0662 Theam_0662 612011 613543 - ComEC/Rec2-related protein KEGG: pmx:PERMA_2021 competence protein~TIGRFAM: ComEC/Rec2-related protein~PFAM: ComEC/Rec2-related protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0662 Theam_0663 Theam_0663 Theam_0663 613596 614375 + 3'(2')%2C5'-bisphosphate nucleotidase KEGG: aae:aq_337 CysQ protein~TIGRFAM: 3'(2')%2C5'-bisphosphate nucleotidase~PFAM: inositol monophosphatase gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0663 Theam_0664 Theam_0664 Theam_0664 614365 616137 + TrkA-C domain protein PFAM: TrkA-C domain protein%3B Citrate transporter~KEGG: pmx:PERMA_1988 TrkA-C domain protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0664 Theam_0665 Theam_0665 Theam_0665 616138 616746 + adenylylsulfate kinase TIGRFAM: adenylylsulfate kinase~KEGG: pmx:PERMA_1989 adenylylsulfate kinase~PFAM: adenylylsulfate kinase gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0665 Theam_0666 Theam_0666 Theam_0666 616759 617913 + sulfate adenylyltransferase TIGRFAM: sulfate adenylyltransferase~KEGG: pmx:PERMA_1983 sulfate adenylyltransferase~PFAM: ATP-sulfurylase gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0666 Theam_0667 Theam_0667 Theam_0667 618002 619210 + polysaccharide biosynthesis protein PFAM: polysaccharide biosynthesis protein~KEGG: dol:Dole_1836 polysaccharide biosynthesis protein gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0667 Theam_0668 Theam_0668 Theam_0668 619224 620060 + sulfotransferase PFAM: sulfotransferase~KEGG: mif:Metin_0222 sulfotransferase gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0668 Theam_0669 Theam_0669 Theam_0669 620073 620945 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: apa:APP7_1477 glycosyltransferase gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0669 Theam_0670 Theam_0670 Theam_0670 620920 622185 + hypothetical protein KEGG: bam:Bamb_3623 hypothetical protein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0670 Theam_0671 Theam_0671 Theam_0671 622163 623212 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: plt:Plut_0774 glycosyl transferase%2C group 1 family protein gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0671 Theam_0672 Theam_0672 Theam_0672 623237 623398 + hypothetical protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0672 Theam_0673 Theam_0673 Theam_0673 623332 623784 + pseudogene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0673 Theam_0674 Theam_0674 Theam_0674 623797 624909 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: pmx:PERMA_2003 glycosyl transferase%2C group 1 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0674 Theam_0675 Theam_0675 Theam_0675 624921 625547 + Undecaprenyl-phosphate galactose phosphotransferase KEGG: pmx:PERMA_2008 putative undecaprenyl-phosphate galactosephosphotransferase~PFAM: sugar transferase gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0675 Theam_0676 Theam_0676 Theam_0676 625620 626009 + S-adenosylmethionine decarboxylase proenzyme KEGG: aae:aq_254 S-adenosylmethionine decarboxylase proenzyme~TIGRFAM: S-adenosylmethionine decarboxylase proenzyme~PFAM: S-adenosylmethionine decarboxylase related gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0676 Theam_0677 Theam_0677 Theam_0677 626126 626509 - transcriptional regulator%2C TraR/DksA family KEGG: tye:THEYE_A0802 RNA polymerase-binding protein DksA gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0677 Theam_0678 Theam_0678 Theam_0678 626588 627775 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: aae:aq_1969 aspartate aminotransferase gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0678 Theam_0679 Theam_0679 Theam_0679 627768 628283 + hypothetical protein KEGG: sat:SYN_02925 hypothetical protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0679 Theam_0680 Theam_0680 Theam_0680 628277 628798 - DNA-directed RNA polymerase%2C omega subunit family protein KEGG: tet:TTHERM_00047130 DNA-directed RNA polymerase%2C omega subunit family protein gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0680 Theam_0681 Theam_0681 Theam_0681 628881 629447 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: aae:aq_281 TetR/AcrR family transcriptional regulator gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0681 Theam_0682 Theam_0682 Theam_0682 629444 632647 + CoA-substrate-specific enzyme activase KEGG: sus:Acid_0922 putative CoA-substrate-specific enzyme activase~TIGRFAM: CoA-substrate-specific enzyme activase~PFAM: Protein of unknown function DUF2229%2C CoA enzyme activase%3B ATPase BadF/BadG/BcrA/BcrD type gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0682 Theam_0683 Theam_0683 Theam_0683 632755 634722 + diguanylate phosphodiesterase KEGG: pmx:PERMA_1004 eal/PAS/GGDEF domain protein~PFAM: EAL domain protein~SMART: EAL domain protein gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0683 Theam_0684 Theam_0684 Theam_0684 634756 636414 + carbon starvation protein CstA PFAM: carbon starvation protein CstA~KEGG: cpo:COPRO5265_1025 carbon starvation-induced protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0684 Theam_0685 Theam_0685 Theam_0685 636427 636774 + hypothetical protein KEGG: nam:NAMH_1795 hypothetical protein gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0685 Theam_0686 Theam_0686 Theam_0686 636771 637751 + NAD-dependent glycerol-3-phosphate dehydrogenase domain protein PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein~KEGG: dvl:Dvul_0226 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0686 Theam_0687 Theam_0687 Theam_0687 637748 638212 + hypothetical protein KEGG: xtr:100145245 family with sequence similarity 129%2C member B gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0687 Theam_0688 Theam_0688 Theam_0688 638205 638912 + phosphate uptake regulator%2C PhoU KEGG: aae:aq_906 transcriptional regulator (PhoU-like)~TIGRFAM: phosphate transport system regulatory protein PhoU~PFAM: PhoU family protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0688 Theam_0689 Theam_0689 Theam_0689 638917 639729 + ABC-3 protein PFAM: ABC-3 protein~KEGG: nde:NIDE0383 manganese transport system permease gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0689 Theam_0690 Theam_0690 Theam_0690 639673 640419 - protein of unknown function DUF72 PFAM: protein of unknown function DUF72~KEGG: nam:NAMH_0940 hypothetical protein gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0690 Theam_0691 Theam_0691 Theam_0691 640416 641000 - NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: mfs:MFS40622_0174 NADPH-dependent FMN reductase gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0691 Theam_0692 Theam_0692 Theam_0692 641009 642448 - ribosome-associated GTPase EngA TIGRFAM: ribosome-associated GTPase EngA%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related~KEGG: saf:SULAZ_0814 GTP-binding protein EngA~SMART: AAA ATPase gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0692 Theam_0693 Theam_0693 Theam_0693 642445 643068 - hypothetical protein KEGG: pcl:Pcal_1647 PP-loop domain-containing protein gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0693 Theam_0694 Theam_0694 Theam_0694 643171 643755 - hypothetical protein KEGG: aae:aq_757 hypothetical protein gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0694 Theam_0695 Theam_0695 Theam_0695 643755 644270 - hypothetical protein KEGG: aae:aq_758 hypothetical protein gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0695 Theam_0696 Theam_0696 Theam_0696 644372 644530 - hypothetical protein KEGG: hypothetical protein gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0696 Theam_0697 Theam_0697 Theam_0697 644508 644969 - prefoldin%2C alpha subunit KEGG: aae:aq_759 prefoldin subunit alpha~TIGRFAM: prefoldin%2C alpha subunit~PFAM: Prefoldin alpha domain protein gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0697 Theam_0698 Theam_0698 Theam_0698 644999 645718 - hypothetical protein KEGG: aae:aq_755 hypothetical protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0698 Theam_0699 Theam_0699 Theam_0699 645730 646422 - Uncharacterized protein family UPF0128 PFAM: Uncharacterised protein family UPF0128~KEGG: nam:NAMH_0411 hypothetical protein gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0699 Theam_0700 Theam_0700 Theam_0700 646575 647981 + SagB-type dehydrogenase domain protein KEGG: dol:Dole_2124 hypothetical protein~TIGRFAM: SagB-type dehydrogenase domain~PFAM: nitroreductase gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0700 Theam_0701 Theam_0701 Theam_0701 648086 649204 + lysine 2%2C3-aminomutase YodO family protein TIGRFAM: lysine 2%2C3-aminomutase YodO family protein~KEGG: apo:Arcpr_1032 lysine 2%2C3-aminomutase YodO family protein~PFAM: Radical SAM domain protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0701 Theam_0702 Theam_0702 Theam_0702 649169 649594 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase KEGG: tmt:Tmath_1994 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0702 Theam_0703 Theam_0703 Theam_0703 649594 650100 - pseudogene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0703 Theam_0704 Theam_0704 Theam_0704 650156 651265 + histidinol-phosphate aminotransferase KEGG: mta:Moth_0515 histidinol phosphate aminotransferase~TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0704 Theam_0705 Theam_0705 Theam_0705 651265 651555 + hypothetical protein KEGG: nis:NIS_1239 hypothetical protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0705 Theam_0706 Theam_0706 Theam_0706 651564 652715 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: msi:Msm_0121 DNA repair exonuclease Rad32 gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0706 Theam_0707 Theam_0707 Theam_0707 652709 653419 + phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: gme:Gmet_3333 phosphoribosyltransferase gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0707 Theam_0708 Theam_0708 Theam_0708 653406 654341 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~KEGG: ddf:DEFDS_2064 peptide/nickel ABC transporter ATP-binding protein~SMART: AAA ATPase gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0708 Theam_0709 Theam_0709 Theam_0709 654341 655135 - 3-methyl-2-oxobutanoate hydroxymethyltransferase TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~KEGG: cbl:CLK_3627 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0709 Theam_0710 Theam_0710 Theam_0710 655135 656025 - ribosome small subunit-dependent GTPase A KEGG: pmx:PERMA_0939 ribosome small subunit-dependent GTPase A~TIGRFAM: ribosome small subunit-dependent GTPase A~PFAM: GTPase EngC gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0710 Theam_0711 Theam_0711 Theam_0711 656080 656373 + Cupin 2 conserved barrel domain protein PFAM: Cupin 2 conserved barrel domain protein~KEGG: pmx:PERMA_1244 hypothetical membrane associated protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0711 Theam_0712 Theam_0712 Theam_0712 656401 657780 - ketose-bisphosphate aldolase class-II PFAM: ketose-bisphosphate aldolase class-II~KEGG: pmx:PERMA_0265 aldolase gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0712 Theam_0713 Theam_0713 Theam_0713 657848 658591 + rare lipoprotein A manually curated~TIGRFAM: rare lipoprotein A~KEGG: dat:HRM2_49390 RlpA-like lipoprotein precursor~PFAM: Rare lipoprotein A%3B Sporulation domain-containing protein gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0713 Theam_0714 Theam_0714 Theam_0714 658600 660159 + L-aspartate oxidase TIGRFAM: L-aspartate oxidase~KEGG: pmx:PERMA_0497 L-aspartate oxidase~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0714 Theam_0715 Theam_0715 Theam_0715 660143 661207 - peptidase M20 PFAM: peptidase M20%3B peptidase dimerisation domain protein~KEGG: pmx:PERMA_0275 succinyl-diaminopimelate desuccinylase gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0715 Theam_0716 Theam_0716 Theam_0716 661293 662834 + CRISPR-associated protein%2C MJ1666 family KEGG: mfs:MFS40622_0585 CRISPR-associated protein%2C MJ1666 family~TIGRFAM: CRISPR-associated protein%2C MJ1666 family%3B CRISPR-associated protein DxTHG motif~PFAM: CRISPR-associated protein DxTHG gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0716 Theam_0717 Theam_0717 Theam_0717 663234 664064 - UDP-N-acetylenolpyruvoylglucosamine reductase KEGG: pmx:PERMA_0621 UDP-N-acetylenolpyruvoylglucosamine reductase~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein%3B FAD linked oxidase domain protein gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0717 Theam_0718 Theam_0718 Theam_0718 664054 665679 - CTP synthase TIGRFAM: CTP synthase~KEGG: pmx:PERMA_0596 CTP synthetase~PFAM: CTP synthase-like%3B glutamine amidotransferase class-I gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0718 Theam_0719 Theam_0719 Theam_0719 665669 666406 - 3-deoxy-D-manno-octulosonate cytidylyltransferase KEGG: hth:HTH_1844 3-deoxy-manno-octulosonate cytidylyltransferase~TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase~PFAM: acylneuraminate cytidylyltransferase gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0719 Theam_0720 Theam_0720 Theam_0720 666408 667103 - phosphoribosylformylglycinamidine synthase I KEGG: ddf:DEFDS_1605 phosphoribosylformylglycinamidine synthase large subunit~TIGRFAM: phosphoribosylformylglycinamidine synthase I gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0720 Theam_0721 Theam_0721 Theam_0721 667103 667360 - phosphoribosylformylglycinamidine synthase%2C purS KEGG: bse:Bsel_0692 phosphoribosylformylglycinamidine synthase%2C PurS~TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS~PFAM: phosphoribosylformylglycinamidine synthetase PurS gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0721 Theam_0722 Theam_0722 Theam_0722 667412 667990 + Abortive infection protein PFAM: Abortive infection protein~KEGG: pmx:PERMA_0789 CAAX amino protease family protein gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0722 Theam_0723 Theam_0723 Theam_0723 668001 668444 + lipoprotein signal peptidase KEGG: cce:Ccel_0609 lipoprotein signal peptidase~TIGRFAM: lipoprotein signal peptidase~PFAM: peptidase A8 signal peptidase II gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0723 Theam_0724 Theam_0724 Theam_0724 668505 670136 + DNA primase TIGRFAM: DNA primase~PFAM: DNA primase catalytic core domain%3B TOPRIM domain-containing protein~KEGG: hth:HTH_1360 DNA primase~SMART: Toprim sub domain-containing protein gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0724 Theam_0725 Theam_0725 Theam_0725 670152 671843 + RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily KEGG: pmx:PERMA_1673 RNA polymerase sigma factor RpoD (sigma-70)~TIGRFAM: RNA polymerase sigma factor RpoD%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 3 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 1.1 domain protein%3B sigma-70 region 4 domain protein gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0725 Theam_0726 Theam_0726 Theam_0726 671853 672677 - pseudouridine synthase KEGG: sul:SYO3AOP1_0988 pseudouridine synthase~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0726 Theam_0727 Theam_0727 Theam_0727 672764 673366 + Peroxiredoxin KEGG: sun:SUN_1284 AhpC/TSA family peroxiredoxin~PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Peroxiredoxin-like gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0727 Theam_0728 Theam_0728 Theam_0728 673367 674368 - polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: pmx:PERMA_0944 polysaccharide deacetylase gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0728 Theam_0729 Theam_0729 Theam_0729 674340 675140 - Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase KEGG: pmx:PERMA_0942 BAX protein~PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase~SMART: Lysozyme subfamily 2 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0729 Theam_0730 Theam_0730 Theam_0730 675223 675801 + hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit KEGG: nam:NAMH_1232 C-terminal fumarate hydratase%2C class I~TIGRFAM: hydro-lyase%2C Fe-S type%2C tartrate/fumarate subfamily%2C beta subunit~PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0730 Theam_0731 Theam_0731 Theam_0731 675878 676243 + NADH-ubiquinone/plastoquinone oxidoreductase chain 3 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~KEGG: bts:Btus_3231 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0731 Theam_0732 Theam_0732 Theam_0732 676234 676707 + NADH-quinone oxidoreductase%2C B subunit TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~KEGG: ddf:DEFDS_1984 NADH-quinone oxidoreductase subunit B~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0732 Theam_0733 Theam_0733 Theam_0733 676704 677189 + NADH dehydrogenase (ubiquinone) 30 kDa subunit PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit~KEGG: pmx:PERMA_1413 NADH-quinone oxidoreductase subunit c/d (nadhdehydrogenase I subunit c/d) (ndh-1 subunit c/d) (Nuo3/nuo4) gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0733 Theam_0734 Theam_0734 Theam_0734 677193 678377 + NADH dehydrogenase I%2C D subunit TIGRFAM: NADH dehydrogenase I%2C D subunit~KEGG: ttr:Tter_1541 NADH dehydrogenase I%2C D subunit~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0734 Theam_0735 Theam_0735 Theam_0735 678374 678856 + NADH dehydrogenase (ubiquinone) 24 kDa subunit PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~KEGG: afr:AFE_2626 NADH-quinone oxidoreductase%2C E subunit gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0735 Theam_0736 Theam_0736 Theam_0736 678857 680122 + NADH-quinone oxidoreductase%2C F subunit TIGRFAM: NADH-quinone oxidoreductase%2C F subunit~KEGG: rhi:NGR_c22070 NADH dehydrogenase I chain F1~PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit%3B Soluble ligand binding domain%3B NADH ubiquinone oxidoreductase%2C F subunit%2C iron sulphur binding gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0736 Theam_0737 Theam_0737 Theam_0737 680124 682310 + NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulfur binding protein PFAM: NADH:ubiquinone oxidoreductase%2C subunit G%2C iron-sulphur binding%3B ferredoxin%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: sme:SMa1523 NuoG2 NADH I chain G 2 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0737 Theam_0738 Theam_0738 Theam_0738 682310 682783 + putative transcriptional regulator%2C Crp/Fnr family KEGG: afr:AFE_2344 cyclic nucleotide-binding domain protein~PFAM: cyclic nucleotide-binding~SMART: cyclic nucleotide-binding gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0738 Theam_0739 Theam_0739 Theam_0739 682780 683739 + respiratory-chain NADH dehydrogenase subunit 1 PFAM: respiratory-chain NADH dehydrogenase subunit 1~KEGG: dds:Ddes_1661 NADH dehydrogenase (quinone) gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0739 Theam_0740 Theam_0740 Theam_0740 683742 684200 + NADH-quinone oxidoreductase%2C chain I TIGRFAM: NADH-quinone oxidoreductase%2C chain I~KEGG: net:Neut_0930 NADH dehydrogenase subunit I gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0740 Theam_0741 Theam_0741 Theam_0741 684200 684679 + NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~KEGG: sul:SYO3AOP1_0879 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0741 Theam_0742 Theam_0742 Theam_0742 684676 684975 + NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: fre:Franean1_6084 NADH dehydrogenase subunit K gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0742 Theam_0743 Theam_0743 Theam_0743 684977 686842 + proton-translocating NADH-quinone oxidoreductase%2C chain L KEGG: sti:Sthe_0299 proton-translocating NADH-quinone oxidoreductase%2C chain L~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0743 Theam_0744 Theam_0744 Theam_0744 686853 688301 + proton-translocating NADH-quinone oxidoreductase%2C chain M KEGG: ddf:DEFDS_1973 NADH-quinone oxidoreductase subunit M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0744 Theam_0745 Theam_0745 Theam_0745 688303 689751 + proton-translocating NADH-quinone oxidoreductase%2C chain N KEGG: pmx:PERMA_1420 NADH-quinone oxidoreductase%2C N subunit~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0745 Theam_0746 Theam_0746 Theam_0746 689748 691136 + L-seryl-tRNA selenium transferase TIGRFAM: L-seryl-tRNA selenium transferase~KEGG: aoe:Clos_1736 selenocysteine synthase~PFAM: Pyridoxal phosphate-dependent transferase gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0746 Theam_0747 Theam_0747 Theam_0747 691133 693097 + TonB-dependent receptor PFAM: TonB-dependent receptor%3B TonB-dependent receptor plug~KEGG: glo:Glov_1115 TonB-dependent receptor gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0747 Theam_0748 Theam_0748 Theam_0748 693070 693843 + hypothetical protein KEGG: acr:Acry_0869 electron transport protein SCO1/SenC gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0748 Theam_0749 Theam_0749 Theam_0749 693815 695086 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: nam:NAMH_0079 diguanylate cyclase (GGDEF) domain protein~SMART: GGDEF domain containing protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0749 Theam_0750 Theam_0750 Theam_0750 695113 695445 - hypothetical protein KEGG: ton:TON_1335 hypothetical protein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0750 Theam_0751 Theam_0751 Theam_0751 695469 696185 - Peptidoglycan-binding lysin domain protein KEGG: gsu:GSU1464 LysM domain-containing protein~PFAM: Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0751 Theam_0752 Theam_0752 Theam_0752 696189 696530 - hypothetical protein KEGG: gga:416791 golgi autoantigen%2C golgin subfamily a%2C 3 gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0752 Theam_0753 Theam_0753 Theam_0753 696600 699860 - acriflavin resistance protein PFAM: acriflavin resistance protein~KEGG: nde:NIDE3916 RND-type efflux transporter%2C transmembrane pump gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0753 Theam_0754 Theam_0754 Theam_0754 699864 701033 - efflux transporter%2C RND family%2C MFP subunit KEGG: ddf:DEFDS_0054 acriflavin resistance protein%2C AcrA/AcrE family~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~PFAM: secretion protein HlyD family protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0754 Theam_0755 Theam_0755 Theam_0755 701103 701774 - glutamine amidotransferase class-I PFAM: glutamine amidotransferase class-I~KEGG: hya:HY04AAS1_1393 glutamine amidotransferase class-I gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0755 Theam_0756 Theam_0756 Theam_0756 701771 703153 - peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: tal:Thal_0403 peptidase U62 modulator of DNA gyrase gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0756 Theam_0757 Theam_0757 Theam_0757 703155 703991 - NAD+ synthetase TIGRFAM: NAD+ synthetase~KEGG: gsu:GSU0652 NAD synthetase gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0757 Theam_0758 Theam_0758 Theam_0758 703972 704820 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: gbm:Gbem_3422 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0758 Theam_0759 Theam_0759 Theam_0759 704823 706025 - surface antigen variable number repeat-containing protein PFAM: surface antigen variable number repeat-containing protein~KEGG: tgr:Tgr7_0335 surface antigen variable number repeat protein gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0759 Theam_0760 Theam_0760 Theam_0760 706022 706264 - hypothetical protein KEGG: saf:SULAZ_0213 hypothetical protein gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0760 Theam_0761 Theam_0761 Theam_0761 706264 706632 - diacylglycerol kinase PFAM: diacylglycerol kinase~KEGG: ttj:TTHA1044 diacylglycerol kinase gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0761 Theam_0762 Theam_0762 Theam_0762 706583 708637 - metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~KEGG: glo:Glov_2731 metal dependent phosphohydrolase~SMART: metal-dependent phosphohydrolase HD region gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0762 Theam_0763 Theam_0763 Theam_0763 708606 709565 - PhoH family protein PFAM: PhoH family protein~KEGG: hth:HTH_0071 phosphate starvation-inducible protein gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0763 Theam_0764 Theam_0764 Theam_0764 709562 711259 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: aae:aq_1013 hypothetical protein gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0764 Theam_0765 Theam_0765 Theam_0765 711252 713936 - SMC domain protein PFAM: SMC domain protein~KEGG: kcr:Kcr_0026 DNA repair ATPase SbcC gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0765 Theam_0766 Theam_0766 Theam_0766 713933 714088 - hypothetical protein KEGG: tmt:Tmath_2236 hypothetical protein gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0766 Theam_0767 Theam_0767 Theam_0767 714091 715599 - sodium:neurotransmitter symporter PFAM: sodium:neurotransmitter symporter~KEGG: aae:aq_2077 SNF family Na(+)/neurotransmitter symporter gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0767 Theam_0768 Theam_0768 Theam_0768 715661 716590 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: mem:Memar_1142 radical SAM domain-containing protein gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0768 Theam_0769 Theam_0769 Theam_0769 716644 719160 + surface antigen (D15) PFAM: surface antigen (D15)%3B surface antigen variable number repeat-containing protein~KEGG: tye:THEYE_A1041 outer membrane protein%2C OMP85 family%2C putative gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0769 Theam_0770 Theam_0770 Theam_0770 719157 720158 - phosphoesterase RecJ domain protein PFAM: phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~KEGG: aae:aq_1630 hypothetical protein gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0770 Theam_0771 Theam_0771 Theam_0771 720155 720454 - ribosome-binding factor A KEGG: sul:SYO3AOP1_0860 ribosome-binding factor A~TIGRFAM: ribosome-binding factor A~PFAM: ribosome-binding factor A gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0771 Theam_0772 Theam_0772 Theam_0772 720455 721786 - peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: slp:Slip_0407 peptidase U62 modulator of DNA gyrase gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0772 Theam_0773 Theam_0773 Theam_0773 721779 722387 - thymidylate synthase%2C flavin-dependent KEGG: gsu:GSU3106 FAD-dependent thymidylate synthase~TIGRFAM: thymidylate synthase%2C flavin-dependent~PFAM: thymidylate synthase complementing protein ThyX gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0773 Theam_0774 Theam_0774 Theam_0774 722432 722878 - CMP/dCMP deaminase zinc-binding protein PFAM: CMP/dCMP deaminase zinc-binding~KEGG: tpd:Teth39_2103 CMP/dCMP deaminase%2C zinc-binding gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0774 Theam_0775 Theam_0775 Theam_0775 722879 723013 - hypothetical protein gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0775 Theam_0776 Theam_0776 Theam_0776 723026 723175 - hypothetical protein KEGG: nve:NEMVE_v1g133919 hypothetical protein gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0776 Theam_0777 Theam_0777 Theam_0777 723187 725859 - cytochrome C family protein TIGRFAM: cytochrome C family protein~KEGG: ddf:DEFDS_0746 multiheme C-type cytochrome gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0777 Theam_0778 Theam_0778 Theam_0778 725859 726659 - NHL repeat containing protein PFAM: NHL repeat containing protein~KEGG: dak:DaAHT2_2116 NHL repeat containing protein gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0778 Theam_0779 Theam_0779 Theam_0779 726670 727383 - hypothetical protein KEGG: dap:Dacet_0787 hypothetical protein gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0779 Theam_0780 Theam_0780 Theam_0780 727383 728315 - cytochrome c family protein KEGG: cla:Cla_0807 cytochrome c family protein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0780 Theam_0781 Theam_0781 Theam_0781 728315 729403 - hypothetical protein KEGG: ddf:DEFDS_0742 multiheme C-type cytochrome gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0781 Theam_0782 Theam_0782 Theam_0782 729414 730289 - hypothetical protein KEGG: dak:DaAHT2_2113 hypothetical protein gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0782 Theam_0783 Theam_0783 Theam_0783 730286 730897 - hypothetical protein KEGG: dap:Dacet_0794 hypothetical protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0783 Theam_0784 Theam_0784 Theam_0784 730894 732168 - hypothetical protein KEGG: gme:Gmet_0911 hypothetical protein gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0784 Theam_0785 Theam_0785 Theam_0785 732275 733480 - molybdenum cofactor synthesis domain protein KEGG: cbe:Cbei_3800 molybdenum cofactor synthesis domain-containing protein~TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MoeA domain protein domain I and II%3B molybdopterin binding domain%3B MoeA domain protein domain IV gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0785 Theam_0786 Theam_0786 Theam_0786 733492 734514 - molybdopterin binding domain protein PFAM: molybdopterin binding domain~KEGG: ddf:DEFDS_0823 molybdopterin biosynthesis protein gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0786 Theam_0787 Theam_0787 Theam_0787 734511 735557 - ABC transporter related protein KEGG: mac:MA1235 molybdate ABC transporter%2C ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0787 Theam_0788 Theam_0788 Theam_0788 735551 736228 - molybdate ABC transporter%2C inner membrane subunit KEGG: mmh:Mmah_1837 molybdate ABC transporter%2C inner membrane subunit~TIGRFAM: molybdate ABC transporter%2C inner membrane subunit~PFAM: binding-protein-dependent transport systems inner membrane component gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0788 Theam_0789 Theam_0789 Theam_0789 736228 736941 - molybdenum ABC transporter%2C periplasmic molybdate-binding protein KEGG: aap:NT05HA_1098 molybdate ABC transporter%2C periplasmic molybdate-binding protein~TIGRFAM: molybdenum ABC transporter%2C periplasmic molybdate-binding protein~PFAM: extracellular solute-binding protein family 1 gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0789 Theam_0790 Theam_0790 Theam_0790 737173 738582 + mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~KEGG: saf:SULAZ_0358 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase~PFAM: mannose-6-phosphate isomerase type II%3B Nucleotidyl transferase gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0790 Theam_0791 Theam_0791 Theam_0791 738579 740666 - Sel1 domain protein repeat-containing protein PFAM: Sel1 domain protein repeat-containing protein~KEGG: nis:NIS_0186 hypothetical protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0791 Theam_0792 Theam_0792 Theam_0792 740666 742495 - Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: nis:NIS_0187 hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0792 Theam_0793 Theam_0793 Theam_0793 742479 745079 - hypothetical protein KEGG: nis:NIS_0188 hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0793 Theam_0794 Theam_0794 Theam_0794 745093 746238 - biotin/lipoyl attachment domain-containing protein PFAM: biotin/lipoyl attachment domain-containing protein~KEGG: nis:NIS_0189 hypothetical protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0794 Theam_0795 Theam_0795 Theam_0795 746240 747778 - alginate biosynthesis protein Alg8 KEGG: nis:NIS_0190 alginate biosynthesis protein Alg8 gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0795 Theam_0796 Theam_0796 Theam_0796 747766 748884 - secreted protein KEGG: sco:SCO3498 secreted protein gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0796 Theam_0797 Theam_0797 Theam_0797 748868 750187 - nucleotide sugar dehydrogenase TIGRFAM: nucleotide sugar dehydrogenase~KEGG: app:CAP2UW1_0858 nucleotide sugar dehydrogenase~PFAM: UDP-glucose/GDP-mannose dehydrogenase%3B UDP-glucose/GDP-mannose dehydrogenase dimerisation%3B UDP-glucose/GDP-mannose dehydrogenase gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0797 Theam_0798 Theam_0798 Theam_0798 750234 750905 - O-methyltransferase family 3 PFAM: O-methyltransferase family 3~KEGG: bmd:BMD_4592 O-methyltransferase gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0798 Theam_0799 Theam_0799 Theam_0799 750940 751245 + dinitrogenase iron-molybdenum cofactor biosynthesis KEGG: pas:Pars_0192 dinitrogenase iron-molybdenum cofactor biosynthesis gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0799 Theam_0800 Theam_0800 Theam_0800 751242 753731 - DNA polymerase I TIGRFAM: DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease%2C N-terminal resolvase-like domain%3B 5'-3' exonuclease%2C SAM-fold domain~KEGG: chy:CHY_1650 DNA polymerase I~SMART: 5'-3' exonuclease%3B Helix-hairpin-helix domain protein class 2%3B DNA-directed DNA polymerase gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0800 Theam_0801 Theam_0801 Theam_0801 753733 755073 - UDP-N-acetylmuramate/alanine ligase KEGG: gbm:Gbem_0492 UDP-N-acetylmuramate--L-alanine ligase~TIGRFAM: UDP-N-acetylmuramate/alanine ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0801 Theam_0802 Theam_0802 Theam_0802 755165 756109 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase~KEGG: pmx:PERMA_1357 VI polysaccharide biosynthesis protein VipB/TviC gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0802 Theam_0803 Theam_0803 Theam_0803 756111 756242 - hypothetical protein gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0803 Theam_0804 Theam_0804 Theam_0804 756365 756811 + putative lipoprotein KEGG: saf:SULAZ_0911 putative lipoprotein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0804 Theam_0805 Theam_0805 Theam_0805 756813 758054 + hypothetical protein KEGG: saf:SULAZ_0912 hypothetical protein gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0805 Theam_0806 Theam_0806 Theam_0806 758056 759039 + hypothetical protein KEGG: saf:SULAZ_0913 hypothetical protein gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0806 Theam_0807 Theam_0807 Theam_0807 759032 760519 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: sul:SYO3AOP1_0533 glycosyl transferase group 1 gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0807 Theam_0808 Theam_0808 Theam_0808 760531 761901 + inner membrane protein KEGG: saf:SULAZ_0915 inner membrane protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0808 Theam_0809 Theam_0809 Theam_0809 761870 764626 + TM1410 hypothetical-related protein PFAM: TM1410 hypothetical-related protein~KEGG: sul:SYO3AOP1_0535 hypothetical protein gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0809 Theam_0810 Theam_0810 Theam_0810 764577 765638 + hypothetical protein KEGG: saf:SULAZ_0917 hypothetical protein gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0810 Theam_0811 Theam_0811 Theam_0811 765635 768649 + tetratricopeptide repeat domain protein KEGG: saf:SULAZ_0918 tetratricopeptide repeat domain protein gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0811 Theam_0812 Theam_0812 Theam_0812 768700 770862 + DNA helicase TIGRFAM: DNA helicase~KEGG: nis:NIS_1242 DNA/RNA helicase gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0812 Theam_0813 Theam_0813 Theam_0813 770864 771640 - Ureidoglycolate lyase KEGG: tte:TTE0260 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway)~PFAM: fumarylacetoacetate (FAA) hydrolase gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0813 Theam_0814 Theam_0814 Theam_0814 771653 772474 - hypothetical protein KEGG: kol:Kole_1020 putative transcriptional regulator%2C ArsR family gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0814 Theam_0815 Theam_0815 Theam_0815 772519 772947 - Nucleoside-diphosphate kinase PFAM: nucleoside diphosphate kinase~KEGG: sul:SYO3AOP1_0074 nucleoside-diphosphate kinase~SMART: nucleoside diphosphate kinase gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0815 Theam_0816 Theam_0816 Theam_0816 772937 773641 - Deoxyribonuclease V KEGG: sul:SYO3AOP1_0101 deoxyribonuclease V~PFAM: Endonuclease V gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0816 Theam_0817 Theam_0817 Theam_0817 773638 774702 - permease YjgP/YjgQ family protein PFAM: permease YjgP/YjgQ family protein~KEGG: gme:Gmet_1248 permease YjgP/YjgQ gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0817 Theam_0818 Theam_0818 Theam_0818 774699 775778 - permease YjgP/YjgQ family protein PFAM: permease YjgP/YjgQ family protein~KEGG: gme:Gmet_1249 permease YjgP/YjgQ gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0818 Theam_0819 Theam_0819 Theam_0819 775775 776659 - protein-export membrane protein SecF KEGG: pca:Pcar_1891 preprotein translocase subunit SecF~TIGRFAM: protein-export membrane protein SecF%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0819 Theam_0820 Theam_0820 Theam_0820 776669 778339 - protein-export membrane protein SecD KEGG: pmx:PERMA_1555 protein-export membrane protein SecD~TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0820 Theam_0821 Theam_0821 Theam_0821 778382 779050 - metal-dependent phosphohydrolase HD sub domain protein KEGG: swo:Swol_1426 HDIG domain-containing protein~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0821 Theam_0822 Theam_0822 Theam_0822 779040 779723 - biotin/acetyl-CoA-carboxylase ligase KEGG: cbb:CLD_3444 BirA bifunctional protein~TIGRFAM: biotin/acetyl-CoA-carboxylase ligase~PFAM: biotin/lipoate A/B protein ligase%3B biotin protein ligase domain protein gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0822 Theam_0823 Theam_0823 Theam_0823 779759 780610 + protein-(glutamine-N5) methyltransferase%2C release factor-specific KEGG: swo:Swol_2396 peptide release factor-glutamine N5-methyltransferase~TIGRFAM: protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B modification methylase%2C HemK family~PFAM: Methyltransferase type 12 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0823 Theam_0824 Theam_0824 Theam_0824 780600 781904 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase KEGG: dvm:DvMF_2451 UDP-N-acetylglucosamine 1-carboxyvinyltransferase~TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0824 Theam_0825 Theam_0825 Theam_0825 781876 782517 + ATP phosphoribosyltransferase TIGRFAM: ATP phosphoribosyltransferase~KEGG: glo:Glov_0819 ATP phosphoribosyltransferase catalytic subunit~PFAM: ATP phosphoribosyltransferase catalytic region gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0825 Theam_0826 Theam_0826 Theam_0826 782504 783358 - formyltetrahydrofolate deformylase KEGG: aae:aq_1818 formyltetrahydrofolate deformylase~TIGRFAM: formyltetrahydrofolate deformylase~PFAM: formyl transferase domain protein%3B amino acid-binding ACT domain protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0826 Theam_0827 Theam_0827 Theam_0827 783362 785188 - glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing KEGG: ddf:DEFDS_1947 glucosamine--fructose-6-phosphate aminotransferase~TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: sugar isomerase (SIS)%3B glutamine amidotransferase class-II gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0827 Theam_0828 Theam_0828 Theam_0828 785255 786664 + tRNA modification GTPase TrmE KEGG: cno:NT01CX_0873 tRNA modification GTPase TrmE~TIGRFAM: tRNA modification GTPase TrmE%3B small GTP-binding protein~PFAM: GTP-binding protein TrmE-like%3B GTP-binding protein HSR1-related gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0828 Theam_0829 Theam_0829 Theam_0829 786674 787573 + Peptidase M23 PFAM: Peptidase M23~KEGG: tit:Thit_0788 peptidase M23 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0829 Theam_0830 Theam_0830 Theam_0830 787548 787922 + protein of unknown function DUF583 PFAM: protein of unknown function DUF583~KEGG: dak:DaAHT2_0091 protein of unknown function DUF583 gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0830 Theam_0831 Theam_0831 Theam_0831 787901 788665 - 6-carboxyhexanoate--CoA ligase KEGG: 6-carboxyhexanoate--CoA ligase~PFAM: 6-carboxyhexanoate--CoA ligase gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0831 Theam_0832 Theam_0832 Theam_0832 788631 789779 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: gur:Gura_2065 MscS mechanosensitive ion channel gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0832 Theam_0833 Theam_0833 Theam_0833 789779 790225 - D-tyrosyl-tRNA(Tyr) deacylase KEGG: gur:Gura_0610 D-tyrosyl-tRNA(Tyr) deacylase~TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase~PFAM: D-tyrosyl-tRNA(Tyr) deacylase gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0833 Theam_0834 Theam_0834 Theam_0834 790229 790843 - multiple antibiotic resistance (MarC)-related protein PFAM: multiple antibiotic resistance (MarC)-related protein~KEGG: nis:NIS_0072 MarC family multiple antibiotic resistance protein gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0834 Theam_0835 Theam_0835 Theam_0835 790830 791705 - 4-hydroxybenzoate polyprenyltransferase KEGG: ddf:DEFDS_0320 4-hydroxybenzoate polyprenyltransferase~TIGRFAM: 4-hydroxybenzoate polyprenyltransferase~PFAM: UbiA prenyltransferase gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0835 Theam_0836 Theam_0836 Theam_0836 791698 792492 - HAD-superfamily hydrolase%2C subfamily IIA KEGG: pmx:PERMA_1466 hypothetical protein~TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIA~PFAM: Haloacid dehalogenase domain protein hydrolase gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0836 Theam_0837 Theam_0837 Theam_0837 792492 793691 - sodium:dicarboxylate symporter PFAM: sodium:dicarboxylate symporter~KEGG: aae:aq_1330 proton/sodium-glutamate symport protein gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0837 Theam_0838 Theam_0838 Theam_0838 793802 794905 + GTP-binding protein YchF KEGG: aae:aq_609 GTP-dependent nucleic acid-binding protein EngD~TIGRFAM: GTP-binding protein YchF~PFAM: protein of unknown function DUF933%3B GTP-binding protein HSR1-related gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0838 Theam_0839 Theam_0839 Theam_0839 794902 795552 + DNA repair protein RecO KEGG: pmx:PERMA_0327 DNA repair protein RecO~TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O RecO gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0839 Theam_0840 Theam_0840 Theam_0840 795549 798425 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: nth:Nther_0841 UvrD/REP helicase gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0840 Theam_0841 Theam_0841 Theam_0841 798479 799669 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B elongation factor G domain IV~KEGG: aae:aq_788 hypothetical protein gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0841 Theam_0842 Theam_0842 Theam_0842 799669 800382 + aminotransferase class IV PFAM: aminotransferase class IV~KEGG: dhd:Dhaf_4442 aminotransferase class IV gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0842 Theam_0843 Theam_0843 Theam_0843 800387 800788 - response regulator receiver protein KEGG: pmx:PERMA_0739 chemotactic response regulator CheY~PFAM: response regulator receiver~SMART: response regulator receiver gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0843 Theam_0844 Theam_0844 Theam_0844 800799 801764 - response regulator receiver modulated CheW protein KEGG: pmx:PERMA_0740 chemotactic response regulator CheV~PFAM: response regulator receiver%3B CheW domain protein~SMART: response regulator receiver%3B CheW domain protein gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0844 Theam_0845 Theam_0845 Theam_0845 801768 803654 - methyl-accepting chemotaxis sensory transducer KEGG: pmx:PERMA_0738 methyl-accepting chemotaxis protein signaling domain protein~PFAM: chemotaxis sensory transducer~SMART: chemotaxis sensory transducer gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0845 Theam_0846 Theam_0846 Theam_0846 803657 804160 - CheW protein KEGG: nis:NIS_0603 purine-binding chemotaxis protein CheW~PFAM: CheW domain protein~SMART: CheW domain protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0846 Theam_0847 Theam_0847 Theam_0847 804157 806145 - CheA signal transduction histidine kinase KEGG: pmx:PERMA_0742 chemotaxis protein CheA~PFAM: ATP-binding region ATPase domain protein%3B Hpt domain protein%3B Signal transducing histidine kinase homodimeric%3B CheW domain protein~SMART: CheW domain protein%3B Hpt domain protein%3B ATP-binding region ATPase domain protein gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0847 Theam_0848 Theam_0848 Theam_0848 806155 806673 - putative myosin-2 heavy chain%2C non muscle KEGG: pmx:PERMA_0743 putative myosin-2 heavy chain%2C non muscle gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0848 Theam_0849 Theam_0849 Theam_0849 806738 807850 - cell division protein FtsZ KEGG: tpd:Teth39_0819 cell division protein FtsZ~TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ%2C 2-layer sandwich domain gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0849 Theam_0850 Theam_0850 Theam_0850 807861 809102 - cell division protein FtsA KEGG: tth:TTC0723 cell division protein FtsA~TIGRFAM: cell division protein FtsA~PFAM: cell division protein FtsA gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0850 Theam_0851 Theam_0851 Theam_0851 809081 809815 - hypothetical protein KEGG: pph:Ppha_2892 polypeptide-transport-associated domain protein FtsQ-type gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0851 Theam_0852 Theam_0852 Theam_0852 809812 810690 - D-alanine/D-alanine ligase TIGRFAM: D-alanine/D-alanine ligase~KEGG: pmx:PERMA_0620 D-alanine--D-alanine ligase B (D-alanylalanine synthetaseB) (D-Ala-D-Ala ligase B)~PFAM: D-alanine--D-alanine ligase domain protein gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0852 Theam_0853 Theam_0853 Theam_0853 810687 811985 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate/D-alanyl-D-alanyl ligase KEGG: aae:aq_821 UDP-MurNAc-pentapeptide sythetase~TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate/D-alanyl-D-alanyl ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0853 Theam_0854 Theam_0854 Theam_0854 811954 813411 - UDP-N-acetylmuramyl-tripeptide synthetase manually curated~TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~KEGG: aae:aq_1747 UDP-MurNac-tripeptide synthetase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0854 Theam_0855 Theam_0855 Theam_0855 813408 813707 - hypothetical protein KEGG: pmx:PERMA_0770 hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0855 Theam_0856 Theam_0856 Theam_0856 813751 814035 - hypothetical protein KEGG: ebi:EbC_31890 putative Rz lytic protein gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0856 Theam_0857 Theam_0857 Theam_0857 814037 815008 - molybdenum cofactor biosynthesis protein A TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: Radical SAM domain protein%3B molybdenum cofactor synthesis domain protein~KEGG: slp:Slip_0568 molybdenum cofactor biosynthesis protein A~SMART: Elongator protein 3/MiaB/NifB gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0857 Theam_0858 Theam_0858 Theam_0858 815192 815794 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: aae:aq_281 TetR/AcrR family transcriptional regulator gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0858 Theam_0859 Theam_0859 Theam_0859 815846 816397 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: gsu:GSU2741 TetR family transcriptional regulator gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0859 Theam_0860 Theam_0860 Theam_0860 816394 817656 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: hth:HTH_0028 multidrug resistance efflux pump gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0860 Theam_0861 Theam_0861 Theam_0861 817653 819209 + drug resistance transporter%2C EmrB/QacA subfamily KEGG: saf:SULAZ_1244 major facilitator family transporter~TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0861 Theam_0862 Theam_0862 Theam_0862 819163 820452 + outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: pmx:PERMA_0803 outer membrane efflux protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0862 Theam_0863 Theam_0863 Theam_0863 820449 821615 + secretion protein HlyD family protein PFAM: secretion protein HlyD family protein~KEGG: tcx:Tcr_1133 secretion protein HlyD gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0863 Theam_0864 Theam_0864 Theam_0864 821612 823453 + ABC transporter related protein KEGG: ddf:DEFDS_1588 multidrug ABC transporter ATP-binding protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0864 Theam_0865 Theam_0865 Theam_0865 823450 824556 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: ddf:DEFDS_1589 multidrug ABC transporter permease gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0865 Theam_0866 Theam_0866 Theam_0866 824553 825638 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: ddf:DEFDS_1590 multidrug ABC transporter permease gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0866 Theam_0867 Theam_0867 Theam_0867 825555 826382 - CRISPR-associated protein Cas6 TIGRFAM: CRISPR-associated protein Cas6~KEGG: tra:Trad_0432 CRISPR-associated protein Cas6 gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0867 Theam_0868 Theam_0868 Theam_0868 826372 827592 - CRISPR-associated RAMP protein%2C Csm5 family KEGG: tye:THEYE_A0637 CRISPR-associated RAMP protein%2C Csm5 family~TIGRFAM: CRISPR-associated RAMP protein%2C Csm5 family~PFAM: protein of unknown function DUF324 gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0868 Theam_0869 Theam_0869 Theam_0869 827606 828550 - protein of unknown function DUF324 PFAM: protein of unknown function DUF324~KEGG: saf:SULAZ_1605 crispr-associated RAMP protein%2C Csm4 family gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0869 Theam_0870 Theam_0870 Theam_0870 828561 829271 - CRISPR-associated RAMP protein%2C Csm3 family KEGG: tye:THEYE_A0635 CRISPR-associated RAMP protein%2C Csm3 family~TIGRFAM: CRISPR-associated RAMP protein%2C Csm3 family~PFAM: protein of unknown function DUF324 gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0870 Theam_0871 Theam_0871 Theam_0871 829295 829747 - CRISPR-associated protein%2C Csm2 family KEGG: neu:NE0122 hypothetical protein~TIGRFAM: CRISPR-associated protein%2C Csm2 family~PFAM: CRISPR-associated protein TM1810 domain protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0871 Theam_0872 Theam_0872 Theam_0872 829731 832169 - CRISPR-associated protein%2C Csm1 family TIGRFAM: CRISPR-associated protein%2C Csm1 family~KEGG: tye:THEYE_A0633 CRISPR-associated protein%2C Csm1 family gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0872 Theam_0873 Theam_0873 Theam_0873 832254 834425 - DNA ligase%2C NAD-dependent SMART: NAD-dependent DNA ligase %3B Helix-hairpin-helix DNA-binding class 1%3B BRCT domain protein~TIGRFAM: DNA ligase%2C NAD-dependent~KEGG: aae:aq_633 DNA ligase (NAD dependent)~PFAM: NAD-dependent DNA ligase adenylation%3B NAD-dependent DNA ligase OB-fold%3B helix-hairpin-helix motif%3B BRCT domain protein gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0873 Theam_0874 Theam_0874 Theam_0874 834379 835044 - hypothetical protein KEGG: sma:SAV_1042 hypothetical protein gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0874 Theam_0875 Theam_0875 Theam_0875 835034 835723 - cytochrome c assembly protein PFAM: cytochrome c assembly protein~KEGG: dhd:Dhaf_3357 cytochrome c-type biogenesis protein CcsB gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0875 Theam_0876 Theam_0876 Theam_0876 835770 836681 + molybdenum cofactor biosynthesis protein C KEGG: saf:SULAZ_0716 molybdenum cofactor biosynthesis bifunctional protein: molybdenum cofactor biosynthesis protein C/molybdenum cofactor biosynthesis protein B~TIGRFAM: molybdenum cofactor biosynthesis protein C%3B molybdenum cofactor synthesis domain protein~PFAM: molybdopterin cofactor biosynthesis protein MoaC%3B molybdopterin binding domain gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0876 Theam_0877 Theam_0877 Theam_0877 836696 837253 + hypothetical protein KEGG: ddf:DEFDS_1017 molybdopterin-guanine dinucleotide biosynthesis protein A gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0877 Theam_0878 Theam_0878 Theam_0878 837234 837590 + molybdopterin biosynthesis MoaE protein PFAM: molybdopterin biosynthesis MoaE protein~KEGG: tye:THEYE_A0839 molybdopterin converting factor%2C subunit 2 gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0878 Theam_0879 Theam_0879 Theam_0879 837574 837963 + methionine-R-sulfoxide reductase TIGRFAM: methionine-R-sulfoxide reductase~KEGG: fno:Fnod_0746 bifunctional methionine sulfoxide reductase B/A protein~PFAM: Methionine sulfoxide reductase B gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0879 Theam_0880 Theam_0880 Theam_0880 837926 838123 - DNA topoisomerase type IA zn finger domain protein PFAM: DNA topoisomerase type IA zn finger domain protein~KEGG: slp:Slip_0944 DNA topoisomerase I gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0880 Theam_0881 Theam_0881 Theam_0881 838193 839383 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: nis:NIS_1674 peptide ABC transporter permease gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0881 Theam_0882 Theam_0882 Theam_0882 839380 840570 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: nis:NIS_1673 peptide ABC transporter permease gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0882 Theam_0883 Theam_0883 Theam_0883 840570 841262 - ABC transporter related protein KEGG: pmx:PERMA_0680 macrolide export ATP-binding/permease protein MacB~PFAM: ABC transporter related~SMART: AAA ATPase gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0883 Theam_0884 Theam_0884 Theam_0884 841262 842704 - signal recognition particle-docking protein FtsY TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle~KEGG: aae:aq_920 cell division protein FtsY~SMART: AAA ATPase gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0884 Theam_0885 Theam_0885 Theam_0885 842741 843778 - anthranilate phosphoribosyltransferase TIGRFAM: anthranilate phosphoribosyltransferase~KEGG: saf:SULAZ_0181 anthranilate phosphoribosyltransferase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0885 Theam_0886 Theam_0886 Theam_0886 843756 844202 - protein of unknown function DUF123 PFAM: protein of unknown function DUF123~KEGG: tpe:Tpen_0858 hypothetical protein gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0886 Theam_0887 Theam_0887 Theam_0887 844192 845178 - metalloendopeptidase%2C glycoprotease family TIGRFAM: metalloendopeptidase%2C glycoprotease family~KEGG: pmx:PERMA_0185 putative DNA-binding/iron metalloprotein/AP endonuclease~PFAM: peptidase M22 glycoprotease gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0887 Theam_0888 Theam_0888 Theam_0888 845178 845414 - hypothetical protein KEGG: eel:EUBELI_01374 acetolactate synthase gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0888 Theam_0889 Theam_0889 Theam_0889 845411 847294 - transglutaminase domain-containing protein PFAM: transglutaminase domain-containing protein~KEGG: dth:DICTH_0562 tetratricopeptide repeat domain protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0889 Theam_0890 Theam_0890 Theam_0890 847305 848654 - phosphoglucosamine mutase KEGG: mes:Meso_3166 phosphoglucosamine mutase~TIGRFAM: phosphoglucosamine mutase~PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0890 Theam_0891 Theam_0891 Theam_0891 848651 849280 - hypothetical protein KEGG: tye:THEYE_A0045 hypothetical protein gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0891 Theam_0892 Theam_0892 Theam_0892 849264 850073 - protein of unknown function DUF147 PFAM: protein of unknown function DUF147~KEGG: pmx:PERMA_1676 hypothetical protein gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0892 Theam_0893 Theam_0893 Theam_0893 850067 851275 - dihydropteroate synthase TIGRFAM: dihydropteroate synthase~KEGG: pmx:PERMA_1675 dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0893 Theam_0894 Theam_0894 Theam_0894 851407 854052 + Polynucleotide adenylyltransferase region protein KEGG: gsu:GSU1581 polyA polymerase family protein~PFAM: Polynucleotide adenylyltransferase region%3B CBS domain containing protein%3B phosphoesterase RecJ domain protein%3B phosphoesterase DHHA1~SMART: CBS domain containing protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0894 Theam_0895 Theam_0895 Theam_0895 854024 854848 + general secretion pathway protein C KEGG: hya:HY04AAS1_1178 PDZ/DHR/GLGF domain protein~TIGRFAM: general secretion pathway protein C~SMART: PDZ/DHR/GLGF domain protein gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0895 Theam_0896 Theam_0896 Theam_0896 854856 856772 + general secretion pathway protein D KEGG: dma:DMR_28370 general secretion pathway protein D precursor~TIGRFAM: general secretion pathway protein D~PFAM: type II and III secretion system protein%3B NolW domain protein gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0896 Theam_0897 Theam_0897 Theam_0897 856753 858354 + general secretory pathway protein E KEGG: pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE)~TIGRFAM: general secretory pathway protein E~PFAM: type II secretion system protein E%3B General secretory system II protein E domain protein gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0897 Theam_0898 Theam_0898 Theam_0898 858354 859565 + Type II secretion system F domain protein PFAM: Type II secretion system F domain~KEGG: csc:Csac_1062 type II secretion system protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0898 Theam_0899 Theam_0899 Theam_0899 859577 860623 + type IV pilus assembly protein PilM KEGG: nde:NIDE1348 type IV pilus biogenesis protein PilM~TIGRFAM: type IV pilus assembly protein PilM~PFAM: cell division protein FtsA gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0899 Theam_0900 Theam_0900 Theam_0900 860610 861173 + Fimbrial assembly family protein PFAM: Fimbrial assembly family protein~KEGG: afw:Anae109_0687 fimbrial assembly family protein gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0900 Theam_0901 Theam_0901 Theam_0901 861157 861765 + hypothetical protein KEGG: hna:Hneap_1939 pilus assembly protein PilO gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0901 Theam_0902 Theam_0902 Theam_0902 861769 862182 + hypothetical protein KEGG: lbl:LBL_0498 membrane carboxypeptidase/penicillin-binding protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0902 Theam_0903 Theam_0903 Theam_0903 862187 864178 + type II and III secretion system protein PFAM: type II and III secretion system protein%3B NolW domain protein~KEGG: hna:Hneap_1941 type IV pilus secretin PilQ gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0903 Theam_0904 Theam_0904 Theam_0904 864178 864762 + hypothetical protein KEGG: tps:THAPSDRAFT_21606 hypothetical protein gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0904 Theam_0905 Theam_0905 Theam_0905 864762 865613 + tRNA pseudouridine synthase B KEGG: aae:aq_705 tRNA pseudouridine 55 synthase~TIGRFAM: tRNA pseudouridine synthase B~PFAM: pseudouridylate synthase TruB domain protein%3B tRNA pseudouridine synthase II %3B tRNA pseudouridine synthase B gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0905 Theam_0906 Theam_0906 Theam_0906 865614 869192 - reverse gyrase SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain-containing protein%3B DEAD-like helicase~TIGRFAM: reverse gyrase~KEGG: aae:aq_1159 reverse gyrase~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0906 Theam_0907 Theam_0907 Theam_0907 869249 870376 + iron-containing alcohol dehydrogenase PFAM: iron-containing alcohol dehydrogenase~KEGG: pth:PTH_0851 alcohol dehydrogenase gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0907 Theam_0908 Theam_0908 Theam_0908 870491 871261 - protein of unknown function DUF1009 PFAM: protein of unknown function DUF1009~KEGG: aae:aq_1276 hypothetical protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0908 Theam_0909 Theam_0909 Theam_0909 871272 871700 - NusB antitermination factor KEGG: tte:TTE1292 transcription antitermination protein NusB~TIGRFAM: transcription antitermination factor NusB~PFAM: NusB/RsmB/TIM44 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0909 Theam_0910 Theam_0910 Theam_0910 871703 872164 - 6%2C7-dimethyl-8-ribityllumazine synthase KEGG: saf:SULAZ_0150 6%2C7-dimethyl-8-ribityllumazine synthase~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0910 Theam_0911 Theam_0911 Theam_0911 872161 873126 - enoyl-(acyl-carrier-protein) reductase II KEGG: tpd:Teth39_1289 2-nitropropane dioxygenase%2C NPD~TIGRFAM: enoyl-(acyl-carrier-protein) reductase II~PFAM: 2-nitropropane dioxygenase NPD gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0911 Theam_0912 Theam_0912 Theam_0912 873169 874110 - 3-oxoacyl-(acyl-carrier-protein) synthase III TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~KEGG: aae:aq_1099 3-oxoacyl-(acyl carrier protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein%3B 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0912 Theam_0913 Theam_0913 Theam_0913 874100 875113 - fatty acid/phospholipid synthesis protein PlsX KEGG: hth:HTH_0802 fatty acid/phospholipid synthesis protein~TIGRFAM: fatty acid/phospholipid synthesis protein PlsX~PFAM: fatty acid synthesis plsX protein gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0913 Theam_0914 Theam_0914 Theam_0914 875114 875293 - ribosomal protein L32 KEGG: rxy:Rxyl_1376 50S ribosomal protein L32~TIGRFAM: ribosomal protein L32~PFAM: ribosomal L32p protein gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0914 Theam_0915 Theam_0915 Theam_0915 875298 875831 - protein of unknown function DUF177 PFAM: protein of unknown function DUF177~KEGG: hor:Hore_10220 predicted metal-binding%2C possibly nucleic acid-binding protein gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0915 Theam_0916 Theam_0916 Theam_0916 875948 876511 + hypothetical protein KEGG: gem:GM21_0198 PpiC-type peptidyl-prolyl cis-trans isomerase gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0916 Theam_0917 Theam_0917 Theam_0917 876520 877368 + SurA domain protein PFAM: SurA domain%3B PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: pmx:PERMA_1395 SurA N-domain family gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0917 Theam_0918 Theam_0918 Theam_0918 877382 878038 + hypothetical protein KEGG: clj:CLJU_c37620 hypothetical protein gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0918 Theam_0919 Theam_0919 Theam_0919 878035 878916 + methylenetetrahydrofolate reductase PFAM: methylenetetrahydrofolate reductase~KEGG: mba:Mbar_A2312 methylenetetrahydrofolate reductase gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0919 Theam_0920 Theam_0920 Theam_0920 878925 879617 + undecaprenyl diphosphate synthase TIGRFAM: undecaprenyl diphosphate synthase~KEGG: pmx:PERMA_0376 di-trans%2C poly-cis-decaprenylcistransferase~PFAM: Di-trans-poly-cis-decaprenylcistransferase gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0920 Theam_0921 Theam_0921 Theam_0921 879614 880435 + phosphatidate cytidylyltransferase PFAM: phosphatidate cytidylyltransferase~KEGG: bpf:BpOF4_00020 phosphatidate cytidylyltransferase gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0921 Theam_0922 Theam_0922 Theam_0922 880435 881424 + hydrogenase expression/formation protein HypE KEGG: hmo:HM1_1487 hydrogenase expression/formation protein HypE~TIGRFAM: hydrogenase expression/formation protein HypE~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0922 Theam_0923 Theam_0923 Theam_0923 881424 882194 + Conserved hypothetical protein CHP00245 PFAM: Conserved hypothetical protein CHP00245~KEGG: nam:NAMH_0881 hypothetical protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0923 Theam_0924 Theam_0924 Theam_0924 882195 883256 + hydrogenase expression/formation protein HypD KEGG: nmu:Nmul_A1667 hydrogenase formation HypD protein~TIGRFAM: hydrogenase expression/formation protein HypD~PFAM: hydrogenase formation HypD protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0924 Theam_0925 Theam_0925 Theam_0925 883260 883820 - hypothetical protein KEGG: aga:AgaP_AGAP002737 AGAP002737-PA gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0925 Theam_0926 Theam_0926 Theam_0926 883813 885846 - dynamin family protein KEGG: cha:CHAB381_0787 dynamin family protein gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0926 Theam_0927 Theam_0927 Theam_0927 885863 887794 - GTP-binding protein HSR1-related protein PFAM: GTP-binding protein HSR1-related~KEGG: ate:Athe_2259 dynamin family protein gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0927 Theam_0928 Theam_0928 Theam_0928 887796 889463 - GTP-binding protein HSR1-related protein PFAM: GTP-binding protein HSR1-related~KEGG: pth:PTH_0620 hypothetical protein gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0928 Theam_0929 Theam_0929 Theam_0929 889585 890904 + two component%2C sigma54 specific%2C transcriptional regulator%2C Fis family KEGG: gme:Gmet_1397 two component%2C sigma54 specific%2C Fis family transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver%3B AAA ATPase gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0929 Theam_0930 Theam_0930 Theam_0930 890901 892022 + integral membrane sensor signal transduction histidine kinase KEGG: mxa:MXAN_1249 developmental sensor histidine kinase SasS~PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0930 Theam_0931 Theam_0931 Theam_0931 892174 893127 + Protein of unknown function DUF2202 PFAM: Protein of unknown function DUF2202~KEGG: nam:NAMH_0394 hypothetical protein gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0931 Theam_0932 Theam_0932 Theam_0932 893127 893498 + hypothetical protein KEGG: bge:BC1002_4465 peptidylprolyl isomerase FKBP-type gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0932 Theam_0933 Theam_0933 Theam_0933 893504 893833 + hypothetical protein KEGG: dpo:Dpse_GA10213 GA10213 gene product from transcript GA10213-RA gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0933 Theam_0934 Theam_0934 Theam_0934 893884 894696 + glycoside hydrolase family 18 PFAM: glycoside hydrolase family 18~KEGG: nam:NAMH_0395 hypothetical protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0934 Theam_0935 Theam_0935 Theam_0935 894668 894919 + hypothetical protein KEGG: pmx:PERMA_0882 hypothetical protein gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0935 Theam_0936 Theam_0936 Theam_0936 894912 895940 + hypothetical protein KEGG: pmx:PERMA_0883 hypothetical protein gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0936 Theam_0937 Theam_0937 Theam_0937 895954 896088 + hypothetical protein KEGG: ssc:397489 outer dense fiber protein gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0937 Theam_0938 Theam_0938 Theam_0938 896094 897446 + Orn/DAP/Arg decarboxylase 2 PFAM: Orn/DAP/Arg decarboxylase 2~KEGG: pmx:PERMA_0884 diaminopimelate decarboxylase gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0938 Theam_0939 Theam_0939 Theam_0939 897443 899512 + Peptidase M23 PFAM: Peptidase M23~KEGG: pmx:PERMA_0885 putative UreA transporter gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0939 Theam_0940 Theam_0940 Theam_0940 899515 900411 + hypothetical protein KEGG: pmx:PERMA_0886 hypothetical protein gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0940 Theam_0941 Theam_0941 Theam_0941 900425 901096 + tetratricopeptide repeat domain protein KEGG: pmx:PERMA_0887 tetratricopeptide repeat domain protein gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0941 Theam_0942 Theam_0942 Theam_0942 901294 902574 - phosphoribosylamine/glycine ligase KEGG: tjr:TherJR_0831 phosphoribosylamine/glycine ligase~TIGRFAM: phosphoribosylamine/glycine ligase~PFAM: Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B Phosphoribosylglycinamide synthetase%2C N-domain%3B Phosphoribosylglycinamide synthetase%2C C-domain gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0942 Theam_0943 Theam_0943 Theam_0943 902588 903208 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic~KEGG: dsh:Dshi_1605 lytic murein transglycosylase gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0943 Theam_0944 Theam_0944 Theam_0944 903168 904046 - signal peptide peptidase SppA%2C 36K type KEGG: pca:Pcar_1881 signal peptide peptidase SppA%2C 67K type~TIGRFAM: signal peptide peptidase SppA%2C 36K type~PFAM: peptidase S49 gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0944 Theam_0945 Theam_0945 Theam_0945 904043 904855 - ribonuclease HIII KEGG: cpt:CpB1112 ribonuclease HIII~TIGRFAM: ribonuclease HIII~PFAM: ribonuclease HII/HIII gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0945 Theam_0946 Theam_0946 Theam_0946 904852 908775 - protein of unknown function DUF490 PFAM: protein of unknown function DUF490~KEGG: sul:SYO3AOP1_1462 hypothetical protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0946 Theam_0947 Theam_0947 Theam_0947 908765 909820 - hypothetical protein KEGG: kko:Kkor_0901 TPR repeat-containing protein gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0947 Theam_0948 Theam_0948 Theam_0948 909821 910312 - histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: tpe:Tpen_0562 histidine triad (HIT) protein gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0948 Theam_0949 Theam_0949 Theam_0949 910328 911005 - hypothetical protein KEGG: dac:Daci_4054 alanyl-tRNA synthetase gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0949 Theam_0950 Theam_0950 Theam_0950 911074 911889 - integrase family protein PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: pmx:PERMA_0865 phage integrase family protein gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0950 Theam_0951 Theam_0951 Theam_0951 912176 912589 + hypothetical protein KEGG: pbe:PB000092.02.0 hypothetical protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0951 Theam_0952 Theam_0952 Theam_0952 912702 913430 + hypothetical protein KEGG: ami:Amir_4735 hypothetical protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0952 Theam_0953 Theam_0953 Theam_0953 913352 914365 - Domain of unknown function DUF1786 putative pyruvate format-lyase activating enzyme PFAM: Domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme~KEGG: mmx:MmarC6_1404 domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0953 Theam_0954 Theam_0954 Theam_0954 914430 915518 + cell division protein FtsZ KEGG: sat:SYN_00437 cell division protein FtsZ~TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ%2C 2-layer sandwich domain gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0954 Theam_0955 Theam_0955 Theam_0955 915532 916107 - Nicotinamidase KEGG: aae:aq_994 pyrazinamidase/nicotinamidase~PFAM: isochorismatase hydrolase gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0955 Theam_0956 Theam_0956 Theam_0956 916107 916961 - hypothetical protein KEGG: ddf:DEFDS_1510 hypothetical protein gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0956 Theam_0957 Theam_0957 Theam_0957 916954 917469 - chromosome segregation and condensation protein%2C ScpB KEGG: scl:sce2028 hypothetical protein~TIGRFAM: segregation and condensation protein B~PFAM: chromosome segregation and condensation protein ScpB gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0957 Theam_0958 Theam_0958 Theam_0958 917456 918550 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase KEGG: tal:Thal_1204 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase~PFAM: glycosyl transferase family 28%3B Glycosyltransferase 28 domain gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0958 Theam_0959 Theam_0959 Theam_0959 918547 919704 - cell cycle protein PFAM: cell cycle protein~KEGG: pth:PTH_1862 cell division membrane protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0959 Theam_0960 Theam_0960 Theam_0960 919701 920942 - UDP-N-acetylmuramoylalanine/D-glutamate ligase KEGG: rmr:Rmar_2703 UDP-N-acetylmuramoylalanine/D-glutamate ligase~TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0960 Theam_0961 Theam_0961 Theam_0961 921104 921859 + hypothetical protein KEGG: ddf:DEFDS_2033 hypothetical protein gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0961 Theam_0962 Theam_0962 Theam_0962 921964 923175 + peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: hth:HTH_1618 processing protease gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0962 Theam_0963 Theam_0963 Theam_0963 923143 924387 - hypothetical protein KEGG: cbf:CLI_0097 peptidil-prolyl isomerase family protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0963 Theam_0964 Theam_0964 Theam_0964 924389 925372 - ADP-ribosylation/Crystallin J1 PFAM: ADP-ribosylation/Crystallin J1~KEGG: aae:aq_534 ADP-ribosylglycohydrolase gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0964 Theam_0965 Theam_0965 Theam_0965 925475 928999 - hypothetical protein KEGG: mca:MCA0424 cytochrome c family protein gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0965 Theam_0966 Theam_0966 Theam_0966 929018 929413 - hypothetical protein KEGG: mgm:Mmc1_1488 cytochrome-c peroxidase gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0966 Theam_0967 Theam_0967 Theam_0967 929595 931043 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: shl:Shal_0662 formate dehydrogenase%2C alpha subunit gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0967 Theam_0968 Theam_0968 Theam_0968 931103 931540 + iron (metal) dependent repressor%2C DtxR family KEGG: dal:Dalk_2732 iron (metal) dependent repressor%2C DtxR family~PFAM: iron dependent repressor~SMART: iron dependent repressor gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0968 Theam_0969 Theam_0969 Theam_0969 931515 932627 + Radical SAM domain protein KEGG: dau:Daud_1089 radical SAM domain-containing protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0969 Theam_0970 Theam_0970 Theam_0970 932636 933751 + Radical SAM domain protein KEGG: saf:SULAZ_0984 putative menaquinone biosynthesis protein%2C family~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0970 Theam_0971 Theam_0971 Theam_0971 933748 933885 + hypothetical protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0971 Theam_0972 Theam_0972 Theam_0972 934299 936731 + phosphoenolpyruvate synthase KEGG: pmx:PERMA_0568 phosphoenolpyruvate synthase~TIGRFAM: phosphoenolpyruvate synthase~PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding%3B PEP-utilising protein mobile region%3B PEP-utilizing protein gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0972 Theam_0973 Theam_0973 Theam_0973 936750 937772 + D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region~KEGG: sul:SYO3AOP1_0314 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0973 Theam_0974 Theam_0974 Theam_0974 937788 938999 + phosphoglucose isomerase (PGI) PFAM: phosphoglucose isomerase (PGI)~KEGG: pmx:PERMA_1557 glucose-6-phosphate isomerase gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0974 Theam_0975 Theam_0975 Theam_0975 938977 940266 + Cyclopropane-fatty-acyl-phospholipid synthase KEGG: gur:Gura_1633 cyclopropane-fatty-acyl-phospholipid synthase~PFAM: Cyclopropane-fatty-acyl-phospholipid synthase gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0975 Theam_0976 Theam_0976 Theam_0976 940266 942758 + Nucleotidyl transferase PFAM: Nucleotidyl transferase%3B transferase hexapeptide repeat containing protein%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II~KEGG: saf:SULAZ_1017 mannose-1-phosphate guanyltransferase gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0976 Theam_0977 Theam_0977 Theam_0977 942737 944794 + glycoside hydrolase family 57 PFAM: glycoside hydrolase family 57~KEGG: saf:SULAZ_1015 glycoside hydrolase gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0977 Theam_0978 Theam_0978 Theam_0978 944797 946749 + 4-alpha-glucanotransferase KEGG: sul:SYO3AOP1_0998 4-alpha-glucanotransferase~PFAM: glycoside hydrolase family 57%3B Domain of unknown function DUF1925%3B Domain of unknown function DUF1926 gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0978 Theam_0979 Theam_0979 Theam_0979 946742 947776 + galactose-1-phosphate uridylyltransferase TIGRFAM: galactose-1-phosphate uridylyltransferase~KEGG: saf:SULAZ_1597 galactose-1-phosphate uridylyltransferase~PFAM: galactose-1-phosphate uridyl transferase domain protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0979 Theam_0980 Theam_0980 Theam_0980 947773 949197 + glycogen/starch synthase%2C ADP-glucose type KEGG: saf:SULAZ_1598 glycogen synthase~TIGRFAM: glycogen/starch synthase%2C ADP-glucose type~PFAM: Starch synthase catalytic domain-containing protein%3B glycosyl transferase group 1 gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0980 Theam_0981 Theam_0981 Theam_0981 949207 949806 + Rho termination factor domain protein PFAM: Rho termination factor domain protein~KEGG: dap:Dacet_0433 hypothetical protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0981 Theam_0982 Theam_0982 Theam_0982 949803 951377 + Domain of unknown function DUF1957 PFAM: Domain of unknown function DUF1957%3B glycoside hydrolase family 57~KEGG: saf:SULAZ_0066 glycoside hydrolase%2C family 57 gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0982 Theam_0983 Theam_0983 Theam_0983 951374 952225 + ROK family protein PFAM: ROK family protein~KEGG: sul:SYO3AOP1_0014 ROK family protein gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0983 Theam_0984 Theam_0984 Theam_0984 952270 953190 + malonyl CoA-acyl carrier protein transacylase KEGG: pth:PTH_1743 (acyl-carrier-protein) S-malonyltransferase~TIGRFAM: malonyl CoA-acyl carrier protein transacylase~PFAM: Acyl transferase gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0984 Theam_0985 Theam_0985 Theam_0985 953196 954902 + ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent TIGRFAM: ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~KEGG: tye:THEYE_A0131 ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0985 Theam_0986 Theam_0986 Theam_0986 954887 956584 + peptidase C11 clostripain PFAM: peptidase C11 clostripain~KEGG: adg:Adeg_2154 peptidase C11 clostripain gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0986 Theam_0987 Theam_0987 Theam_0987 956581 956934 + hypothetical protein KEGG: rpd:RPD_1789 hypothetical protein gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0987 Theam_0988 Theam_0988 Theam_0988 956931 957881 + thiamine-monophosphate kinase TIGRFAM: thiamine-monophosphate kinase~KEGG: aac:Aaci_0368 thiamine-monophosphate kinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0988 Theam_0989 Theam_0989 Theam_0989 957882 958646 + undecaprenol kinase KEGG: pmx:PERMA_0381 undecaprenyl-diphosphatase UppP~TIGRFAM: undecaprenol kinase~PFAM: Bacitracin resistance protein BacA gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0989 Theam_0990 Theam_0990 Theam_0990 958659 959741 + twitching motility protein TIGRFAM: twitching motility protein~PFAM: type II secretion system protein E~KEGG: aae:aq_745 twitching motility protein PilT~SMART: AAA ATPase gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0990 Theam_0991 Theam_0991 Theam_0991 959744 960958 + Type II secretion system F domain protein PFAM: Type II secretion system F domain~KEGG: ddf:DEFDS_1111 type IV pilus assembly protein PilC gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0991 Theam_0992 Theam_0992 Theam_0992 960948 962054 - 8-amino-7-oxononanoate synthase TIGRFAM: 8-amino-7-oxononanoate synthase~KEGG: cyh:Cyan8802_0065 8-amino-7-oxononanoate synthase~PFAM: aminotransferase class I and II gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0992 Theam_0993 Theam_0993 Theam_0993 962035 962613 - two component transcriptional regulator%2C Fis family KEGG: slt:Slit_0013 two component transcriptional regulator%2C fis family~PFAM: response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0993 Theam_0994 Theam_0994 Theam_0994 962594 963976 - DNA polymerase III%2C subunits gamma and tau TIGRFAM: DNA polymerase III%2C subunits gamma and tau~PFAM: AAA ATPase central domain protein~KEGG: aae:aq_1855 DNA polymerase III gamma subunit~SMART: AAA ATPase gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0994 Theam_0995 Theam_0995 Theam_0995 964065 966719 - plasma-membrane proton-efflux P-type ATPase KEGG: nam:NAMH_0768 plasma-membrane proton-efflux P-type ATPase~TIGRFAM: plasma-membrane proton-efflux P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B cation transporting ATPase domain protein%3B Haloacid dehalogenase domain protein hydrolase gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0995 Theam_0996 Theam_0996 Theam_0996 966712 966870 - hypothetical protein KEGG: pfs:pQBR0054 hypothetical protein gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0996 Theam_0997 Theam_0997 Theam_0997 966996 968639 + Cl- channel voltage-gated family protein KEGG: dde:Dde_0310 CBS~PFAM: Cl- channel voltage-gated family protein%3B CBS domain containing protein~SMART: CBS domain containing protein gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0997 Theam_0998 Theam_0998 Theam_0998 968691 970208 + Glutamate synthase (NADPH) KEGG: ate:Athe_2360 glutamate synthase (NADPH)~PFAM: ferredoxin-dependent glutamate synthase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0998 Theam_0999 Theam_0999 Theam_0999 970218 970670 + 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein KEGG: gur:Gura_2493 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_0999 Theam_1000 Theam_1000 Theam_1000 970696 971985 + FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: tma:TM0395 NADH oxidase%2C putative gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1000 Theam_1001 Theam_1001 Theam_1001 971985 973106 + glutamine amidotransferase class-II PFAM: glutamine amidotransferase class-II~KEGG: csc:Csac_0577 glutamine amidotransferase%2C class-II gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1001 Theam_1002 Theam_1002 Theam_1002 973124 973918 + glutamate synthase alpha subunit domain protein PFAM: glutamate synthase alpha subunit domain protein~KEGG: chy:CHY_0708 GXGXG domain-containing protein gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1002 Theam_1003 Theam_1003 Theam_1003 974110 975318 + tryptophan synthase%2C beta subunit KEGG: aae:aq_706 tryptophan synthase subunit beta~TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1003 Theam_1004 Theam_1004 Theam_1004 975312 976535 + diguanylate cyclase/phosphodiesterase TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~KEGG: sul:SYO3AOP1_1560 diguanylate cyclase/phosphodiesterase~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1004 Theam_1005 Theam_1005 Theam_1005 976532 977755 - tyrosyl-tRNA synthetase TIGRFAM: tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib%3B RNA-binding S4 domain protein~KEGG: pmx:PERMA_0176 tyrosyl-tRNA synthetase~SMART: RNA-binding S4 domain protein gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1005 Theam_1006 Theam_1006 Theam_1006 977752 978237 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: aae:aq_1359 acetyltransferase gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1006 Theam_1007 Theam_1007 Theam_1007 978234 979460 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: ddf:DEFDS_0471 lipoprotein-releasing system permease protein gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1007 Theam_1008 Theam_1008 Theam_1008 979457 981010 - lysyl-tRNA synthetase KEGG: pmx:PERMA_1426 lysyl-tRNA synthetase~TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1008 Theam_1009 Theam_1009 Theam_1009 981154 981936 + protein of unknown function DUF140 PFAM: protein of unknown function DUF140~KEGG: aae:aq_355 hypothetical protein gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1009 Theam_1010 Theam_1010 Theam_1010 981933 982706 + ABC transporter related protein KEGG: pmx:PERMA_0256 ABC transporter~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1010 Theam_1011 Theam_1011 Theam_1011 982699 984285 + Mammalian cell entry related domain protein PFAM: Mammalian cell entry related domain protein~KEGG: tal:Thal_1386 mammalian cell entry related domain protein gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1011 Theam_1012 Theam_1012 Theam_1012 984282 984899 + imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit KEGG: saf:SULAZ_0383 imidazole glycerol phosphate synthase subunit HisH~TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: glutamine amidotransferase class-I gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1012 Theam_1013 Theam_1013 Theam_1013 984918 985499 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: sul:SYO3AOP1_0756 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1013 Theam_1014 Theam_1014 Theam_1014 985574 985987 + protein of unknown function UPF0047 PFAM: protein of unknown function UPF0047~KEGG: aae:aq_2013 hypothetical protein gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1014 Theam_1015 Theam_1015 Theam_1015 985989 986921 + ferrochelatase KEGG: cyc:PCC7424_2167 ferrochelatase~TIGRFAM: ferrochelatase~PFAM: ferrochelatase gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1015 Theam_1016 Theam_1016 Theam_1016 986921 988297 + protoporphyrinogen oxidase KEGG: glo:Glov_0521 protoporphyrinogen oxidase~TIGRFAM: protoporphyrinogen oxidase~PFAM: amine oxidase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1016 Theam_1017 Theam_1017 Theam_1017 988327 989649 + adenylosuccinate lyase KEGG: gur:Gura_2064 adenylosuccinate lyase~TIGRFAM: adenylosuccinate lyase~PFAM: fumarate lyase%3B Adenylosuccinate lyase-like gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1017 Theam_1018 Theam_1018 Theam_1018 989776 990438 + CRISPR-associated protein Cas6 KEGG: fno:Fnod_1394 CRISPR-associated Cas family protein~TIGRFAM: CRISPR-associated protein Cas6~PFAM: protein of unknown function DUF57 gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1018 Theam_1019 Theam_1019 Theam_1019 990425 991177 - dimethyladenosine transferase SMART: Ribosomal RNA adenine methylase transferase-like~TIGRFAM: dimethyladenosine transferase~KEGG: aae:aq_1816 dimethyladenosine transferase~PFAM: ribosomal RNA adenine methylase transferase gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1019 Theam_1020 Theam_1020 Theam_1020 991174 993210 - molybdopterin oxidoreductase PFAM: molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~KEGG: nis:NIS_1552 formate dehydrogenase%2C alpha subunit gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1020 Theam_1021 Theam_1021 Theam_1021 993473 995323 - ATP-citrate lyase/succinyl-CoA ligase PFAM: ATP-citrate lyase/succinyl-CoA ligase~KEGG: pmx:PERMA_1714 ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme) gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1021 Theam_1022 Theam_1022 Theam_1022 995337 996638 - ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme) KEGG: pmx:PERMA_1715 ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme) gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1022 Theam_1023 Theam_1023 Theam_1023 996721 998928 - isocitrate dehydrogenase%2C NADP-dependent TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent~KEGG: pmx:PERMA_1716 isocitrate dehydrogenase%2C NADP-dependent~PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1023 Theam_1024 Theam_1024 Theam_1024 998985 1000943 - aconitate hydratase KEGG: tjr:TherJR_2355 aconitate hydratase~TIGRFAM: aconitate hydratase~PFAM: aconitate hydratase domain-containing protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1024 Theam_1025 Theam_1025 Theam_1025 1001125 1001979 + hypothetical protein KEGG: cbb:CLD_2071 hypothetical protein gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1025 Theam_1026 Theam_1026 Theam_1026 1002038 1003219 + protein of unknown function UPF0027 PFAM: protein of unknown function UPF0027~KEGG: glo:Glov_0158 protein of unknown function UPF0027 gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1026 Theam_1027 Theam_1027 Theam_1027 1003236 1004258 - methyl-accepting chemotaxis protein KEGG: pmx:PERMA_0401 methyl-accepting chemotaxis protein gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1027 Theam_1028 Theam_1028 Theam_1028 1004397 1005470 - hypothetical protein KEGG: nam:NAMH_0673 hypothetical protein gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1028 Theam_1029 Theam_1029 Theam_1029 1005546 1007489 - protein of unknown function DUF505 PFAM: protein of unknown function DUF505~KEGG: aae:aq_752 hypothetical protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1029 Theam_1030 Theam_1030 Theam_1030 1007616 1009358 + Cl- channel voltage-gated family protein KEGG: pmx:PERMA_1270 chloride channel protein~PFAM: Cl- channel voltage-gated family protein%3B CBS domain containing protein~SMART: CBS domain containing protein gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1030 Theam_1031 Theam_1031 Theam_1031 1009355 1010785 + DNA mismatch repair protein domain protein PFAM: DNA mismatch repair protein domain protein%3B ATP-binding region ATPase domain protein%3B MutL dimerisation~KEGG: saf:SULAZ_0436 DNA mismatch repair protein MutL gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1031 Theam_1032 Theam_1032 Theam_1032 1010795 1012042 + Xanthine/uracil/vitamin C permease PFAM: Xanthine/uracil/vitamin C permease~KEGG: mif:Metin_1265 xanthine/uracil/vitamin C permease gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1032 Theam_1033 Theam_1033 Theam_1033 1012061 1012972 + peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: hth:HTH_0072 putative heat shock protein gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1033 Theam_1034 Theam_1034 Theam_1034 1012976 1014316 + Cl- channel voltage-gated family protein PFAM: Cl- channel voltage-gated family protein~KEGG: mif:Metin_0442 Cl-channel voltage-gated family protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1034 Theam_1035 Theam_1035 Theam_1035 1014313 1015488 + phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~KEGG: fno:Fnod_1467 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase~PFAM: DNA/pantothenate metabolism flavoprotein domain protein%3B flavoprotein gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1035 Theam_1036 Theam_1036 Theam_1036 1015472 1016182 - RNA methyltransferase%2C TrmH family%2C group 3 KEGG: hth:HTH_1406 rRNA methylase~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1036 Theam_1037 Theam_1037 Theam_1037 1016251 1016382 + hypothetical protein gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1037 Theam_1038 Theam_1038 Theam_1038 1016366 1016791 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mfs:MFS40622_0839 GCN5-related N-acetyltransferase gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1038 Theam_1039 Theam_1039 Theam_1039 1016829 1018067 + MATE efflux family protein KEGG: tal:Thal_0796 MATE efflux family protein~TIGRFAM: MATE efflux family protein~PFAM: multi antimicrobial extrusion protein MatE gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1039 Theam_1040 Theam_1040 Theam_1040 1018048 1020006 - multi-sensor signal transduction histidine kinase KEGG: nde:NIDE1222 sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B PAS fold-4 domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1040 Theam_1041 Theam_1041 Theam_1041 1019999 1021612 - carbohydrate kinase%2C YjeF related protein KEGG: tjr:TherJR_0655 carbohydrate kinase%2C YjeF related protein~TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: YjeF-family domain-containing protein%3B protein of unknown function UPF0031 gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1041 Theam_1042 Theam_1042 Theam_1042 1021609 1022142 - peptide deformylase KEGG: tye:THEYE_A0329 peptide deformylase~TIGRFAM: peptide deformylase~PFAM: formylmethionine deformylase gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1042 Theam_1043 Theam_1043 Theam_1043 1022135 1022890 - Xylose isomerase domain-containing protein TIM barrel KEGG: glo:Glov_0876 xylose isomerase domain protein TIM barrel~PFAM: Xylose isomerase domain-containing protein TIM barrel~SMART: AP endonuclease family 2 gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1043 Theam_1044 Theam_1044 Theam_1044 1022959 1025004 + hypothetical protein KEGG: enc:ECL_02088 RND efflux system outer membrane lipoprotein gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1044 Theam_1045 Theam_1045 Theam_1045 1025039 1025383 + Phosphoribosyl-AMP cyclohydrolase KEGG: fpl:Ferp_0284 phosphoribosyl-AMP cyclohydrolase~PFAM: phosphoribosyl-AMP cyclohydrolase gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1045 Theam_1046 Theam_1046 Theam_1046 1025387 1025674 + phosphoribosyl-ATP diphosphatase KEGG: sul:SYO3AOP1_1236 phosphoribosyl-ATP diphosphatase~TIGRFAM: phosphoribosyl-ATP diphosphatase~PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1046 Theam_1047 Theam_1047 Theam_1047 1025678 1026004 + hypothetical protein KEGG: lsg:lse_1028 trancriptional regulatory protein PocR%2C putative gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1047 Theam_1048 Theam_1048 Theam_1048 1026011 1026880 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: dth:DICTH_1940 sensory box protein~SMART: GGDEF domain containing protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1048 Theam_1049 Theam_1049 Theam_1049 1026877 1027218 - histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: tjr:TherJR_2445 histidine triad (HIT) protein gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1049 Theam_1050 Theam_1050 Theam_1050 1027197 1028447 - penicillin-binding protein transpeptidase PFAM: penicillin-binding protein transpeptidase~KEGG: gme:Gmet_2778 penicillin-binding protein%2C transpeptidase gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1050 Theam_1051 Theam_1051 Theam_1051 1028504 1029631 + NurA domain protein PFAM: NurA domain~KEGG: mru:mru_1103 hypothetical protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1051 Theam_1052 Theam_1052 Theam_1052 1029621 1030301 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: tga:TGAM_0938 SAM-dependent methyltransferase gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1052 Theam_1053 Theam_1053 Theam_1053 1030304 1031344 + tRNA 2-selenouridine synthase KEGG: gym:GYMC10_4283 tRNA 2-selenouridine synthase~TIGRFAM: tRNA 2-selenouridine synthase~SMART: Rhodanese domain protein gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1053 Theam_1054 Theam_1054 Theam_1054 1031311 1032435 - Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: aae:aq_1689 hypothetical protein gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1054 Theam_1055 Theam_1055 Theam_1055 1032556 1033563 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: ton:TON_0415 pyruvate fromate-lyase activating enzyme-related protein gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1055 Theam_1056 Theam_1056 Theam_1056 1033597 1034055 + PEBP family protein PFAM: PEBP family protein~KEGG: tro:trd_A0910 hypothetical protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1056 Theam_1057 Theam_1057 Theam_1057 1034071 1035330 + RNA-metabolising metallo-beta-lactamase PFAM: RNA-metabolising metallo-beta-lactamase~KEGG: hau:Haur_5264 beta-lactamase domain-containing protein gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1057 Theam_1058 Theam_1058 Theam_1058 1035327 1036760 + hypothetical protein KEGG: ang:An15g06310 hypothetical protein gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1058 Theam_1059 Theam_1059 Theam_1059 1036757 1037122 - hypothetical protein KEGG: pmy:Pmen_3185 diguanylate cyclase gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1059 Theam_1060 Theam_1060 Theam_1060 1037097 1038020 - UDP-3-0-acyl N-acetylglucosamine deacetylase KEGG: mfa:Mfla_2262 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase~TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase~PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1060 Theam_1061 Theam_1061 Theam_1061 1038119 1039636 - Radical SAM domain protein KEGG: pca:Pcar_2195 Fe-S oxidoreductase~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1061 Theam_1062 Theam_1062 Theam_1062 1039880 1040386 - heat shock protein Hsp20 PFAM: heat shock protein Hsp20~KEGG: tal:Thal_1363 heat shock protein HSP20 gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1062 Theam_1063 Theam_1063 Theam_1063 1040463 1042190 - PHP domain protein KEGG: aae:aq_1422 DNA polymerase beta family protein~PFAM: PHP domain protein~SMART: DNA polymerase X%3B Helix-hairpin-helix DNA-binding class 1%3B phosphoesterase PHP domain protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1063 Theam_1064 Theam_1064 Theam_1064 1042237 1042644 + thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: geo:Geob_1166 thioesterase superfamily protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1064 Theam_1065 Theam_1065 Theam_1065 1042641 1043720 + hypothetical protein KEGG: mmx:MmarC6_1155 phosphate uptake regulator%2C PhoU gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1065 Theam_1066 Theam_1066 Theam_1066 1043710 1044396 + alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: pmx:PERMA_0107 pyridoxal phosphate enzyme%2C YggS family gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1066 Theam_1067 Theam_1067 Theam_1067 1044408 1045415 + 3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase~KEGG: hth:HTH_1199 3-dehydroquinate synthase gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1067 Theam_1068 Theam_1068 Theam_1068 1045425 1045736 + hypothetical protein KEGG: rno:83799 dipeptidylpeptidase 7 gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1068 Theam_1069 Theam_1069 Theam_1069 1045736 1046680 + ADP-L-glycero-D-manno-heptose-6-epimerase KEGG: aae:aq_344 ADP-L-glycero-D-manno-heptose-6-epimerase~TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase~PFAM: NAD-dependent epimerase/dehydratase gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1069 Theam_1070 Theam_1070 Theam_1070 1046778 1047149 + transcriptional regulator%2C MerR family KEGG: cjr:CJE1365 MerR family transcriptional regulator~PFAM: regulatory protein MerR~SMART: regulatory protein MerR gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1070 Theam_1071 Theam_1071 Theam_1071 1047165 1049708 + ATPase AAA-2 domain protein KEGG: tte:TTE2327 ATPase with chaperone activity%2C ATP-binding subunit~PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B Clp domain protein%3B UvrB/UvrC protein%3B Clp ATPase-like~SMART: AAA ATPase gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1071 Theam_1072 Theam_1072 Theam_1072 1050555 1050893 - hypothetical protein KEGG: aae:aq_aa19 hypothetical protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1072 Theam_1073 Theam_1073 Theam_1073 1050835 1052106 - phage head morphogenesis protein%2C SPP1 gp7 family manually curated~TIGRFAM: phage head morphogenesis protein%2C SPP1 gp7 family~KEGG: mrb:Mrub_1967 phage head morphogenesis protein%2C SPP1 gp7 family~PFAM: head morphogenesis protein SPP1 gp7 gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1073 Theam_1074 Theam_1074 Theam_1074 1052405 1053397 + lipopolysaccharide heptosyltransferase II KEGG: pmx:PERMA_0045 ADP-heptose:LPS heptosyltransferase II~TIGRFAM: lipopolysaccharide heptosyltransferase II~PFAM: glycosyl transferase family 9 gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1074 Theam_1075 Theam_1075 Theam_1075 1053448 1054644 + Methionine adenosyltransferase KEGG: aae:aq_1226 S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase (MAT) gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1075 Theam_1076 Theam_1076 Theam_1076 1054665 1056557 - hypothetical protein KEGG: aae:aq_2146 hypothetical protein gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1076 Theam_1077 Theam_1077 Theam_1077 1056599 1057630 - lysine 2%2C3-aminomutase YodO family protein TIGRFAM: lysine 2%2C3-aminomutase YodO family protein~KEGG: aae:aq_454 hypothetical protein~PFAM: Radical SAM domain protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1077 Theam_1078 Theam_1078 Theam_1078 1057627 1058379 - hypothetical protein KEGG: tet:TTHERM_00180960 hypothetical protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1078 Theam_1079 Theam_1079 Theam_1079 1058405 1059160 + N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D%2C (NapE-hydrolyzing phospholipased) (NapE-pld) manually curated~KEGG: pmx:PERMA_1364 N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D%2C (NapE-hydrolyzing phospholipased) (NapE-pld) gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1079 Theam_1080 Theam_1080 Theam_1080 1059188 1059463 + hypothetical protein KEGG: rsh:Rsph17029_3724 hypothetical protein gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1080 Theam_1081 Theam_1081 Theam_1081 1059516 1062125 + preprotein translocase%2C SecA subunit KEGG: tye:THEYE_A1021 preprotein translocase%2C SecA subunit~TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SecA DEAD domain protein%3B SecA preprotein cross-linking region%3B SecA Wing and Scaffold gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1081 Theam_1082 Theam_1082 Theam_1082 1062161 1063015 + NLP/P60 protein KEGG: tye:THEYE_A1300 probable endopeptidase LytE~PFAM: NLP/P60 protein%3B Peptidoglycan-binding lysin domain~SMART: Peptidoglycan-binding LysM gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1082 Theam_1083 Theam_1083 Theam_1083 1063034 1064479 + protease Do SMART: PDZ/DHR/GLGF domain protein~TIGRFAM: protease Do~KEGG: hth:HTH_1857 periplasmic serine protease~PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1083 Theam_1084 Theam_1084 Theam_1084 1064489 1065445 + RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily KEGG: aae:aq_1452 RNA polymerase sigma factor RpoS~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 3 domain protein gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1084 Theam_1085 Theam_1085 Theam_1085 1065426 1066190 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: nis:NIS_0983 hypothetical protein gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1085 Theam_1086 Theam_1086 Theam_1086 1066197 1066898 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: pmx:PERMA_0085 flagellar motor protein MotB gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1086 Theam_1087 Theam_1087 Theam_1087 1066902 1067663 - MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: pmx:PERMA_0084 chemotaxis protein PomA gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1087 Theam_1088 Theam_1088 Theam_1088 1067727 1069088 - D-lactate dehydrogenase (cytochrome) KEGG: saf:SULAZ_0405 glycolate oxidase%2C subunit GlcD~PFAM: FAD linked oxidase domain protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1088 Theam_1089 Theam_1089 Theam_1089 1069174 1070340 + lipopolysaccharide biosynthesis protein PFAM: lipopolysaccharide biosynthesis protein%3B transcription factor K-box domain-containing protein~KEGG: aae:aq_506 hypothetical protein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1089 Theam_1090 Theam_1090 Theam_1090 1070340 1073273 + polysaccharide export protein PFAM: polysaccharide export protein%3B Soluble ligand binding domain~KEGG: aae:aq_505 polysaccharide biosynthesis protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1090 Theam_1091 Theam_1091 Theam_1091 1073322 1073657 + hypothetical protein KEGG: kfl:Kfla_6991 hypothetical protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1091 Theam_1092 Theam_1092 Theam_1092 1073708 1075684 + protein of unknown function DUF940 membrane lipoprotein PFAM: protein of unknown function DUF940 membrane lipoprotein~KEGG: sat:SYN_02690 WbfB protein gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1092 Theam_1093 Theam_1093 Theam_1093 1075702 1077210 + integral membrane protein MviN KEGG: pmx:PERMA_0021 integral membrane protein MviN~TIGRFAM: integral membrane protein MviN~PFAM: virulence factor MVIN family protein gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1093 Theam_1094 Theam_1094 Theam_1094 1077211 1077969 + prolipoprotein diacylglyceryl transferase KEGG: saf:SULAZ_1057 prolipoprotein diacylglyceryl transferase~TIGRFAM: prolipoprotein diacylglyceryl transferase~PFAM: prolipoprotein diacylglyceryl transferase gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1094 Theam_1095 Theam_1095 Theam_1095 1077969 1078883 + branched-chain amino acid aminotransferase KEGG: aae:aq_1893 branched-chain amino acid aminotransferase~TIGRFAM: branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1095 Theam_1096 Theam_1096 Theam_1096 1078892 1080316 + ferredoxin PFAM: ferredoxin~KEGG: tjr:TherJR_0061 ferredoxin gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1096 Theam_1097 Theam_1097 Theam_1097 1080313 1080567 + hypothetical protein KEGG: pmx:PERMA_0613 hypothetical protein gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1097 Theam_1098 Theam_1098 Theam_1098 1080555 1080983 + general secretion pathway protein G KEGG: aae:aq_418 general secretion pathway protein G~TIGRFAM: general secretion pathway protein G~PFAM: type II secretion system protein G gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1098 Theam_1099 Theam_1099 Theam_1099 1080983 1081702 + RNA methyltransferase%2C TrmH family%2C group 3 KEGG: sul:SYO3AOP1_0003 RNA methyltransferase%2C TrmH family%2C group 3~TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1099 Theam_1100 Theam_1100 Theam_1100 1081724 1082119 + hypothetical protein KEGG: xfa:XF0243 acriflavin resistance protein gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1100 Theam_1101 Theam_1101 Theam_1101 1082149 1083153 + signal transduction histidine kinase%2C nitrogen specific%2C NtrB KEGG: dde:Dde_0110 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1101 Theam_1102 Theam_1102 Theam_1102 1083128 1084486 + two component%2C sigma54 specific%2C transcriptional regulator%2C Fis family KEGG: gur:Gura_0916 two component%2C sigma-54 specific%2C fis family transcriptional regulator~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver%3B AAA ATPase gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1102 Theam_1103 Theam_1103 Theam_1103 1084573 1084830 + hypothetical protein KEGG: apo:Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1103 Theam_1104 Theam_1104 Theam_1104 1084885 1085169 + pseudogene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1104 Theam_1105 Theam_1105 Theam_1105 1085172 1086065 - hypothetical protein KEGG: aae:aq_1923 hypothetical protein gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1105 Theam_1106 Theam_1106 Theam_1106 1086062 1087108 - uroporphyrinogen decarboxylase TIGRFAM: uroporphyrinogen decarboxylase~KEGG: chy:CHY_0483 uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1106 Theam_1107 Theam_1107 Theam_1107 1087142 1087921 - exodeoxyribonuclease III Xth KEGG: nwa:Nwat_2910 exodeoxyribonuclease III~TIGRFAM: exodeoxyribonuclease III Xth%3B exodeoxyribonuclease III~PFAM: Endonuclease/exonuclease/phosphatase gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1107 Theam_1108 Theam_1108 Theam_1108 1087918 1088547 - MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: ddf:DEFDS_1265 biopolymer transport protein%2C ExbB/TolQ family gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1108 Theam_1109 Theam_1109 Theam_1109 1088534 1089334 - protein-L-isoaspartate(D-aspartate) O-methyltransferase PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase~KEGG: sul:SYO3AOP1_0069 tRNA (adenine-N(1)-)-methyltransferase gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1109 Theam_1110 Theam_1110 Theam_1110 1089321 1090379 - Lytic transglycosylase catalytic PFAM: Lytic transglycosylase catalytic%3B Peptidoglycan-binding lysin domain~KEGG: pmx:PERMA_1513 glycoside hydrolase family 23 gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1110 Theam_1111 Theam_1111 Theam_1111 1090372 1091115 - protein of unknown function DUF28 PFAM: protein of unknown function DUF28~KEGG: pmx:PERMA_0079 hypothetical protein gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1111 Theam_1112 Theam_1112 Theam_1112 1091164 1091571 - transcriptional regulator NikR%2C CopG family PFAM: NikR nickel binding~KEGG: gsu:GSU2980 nickel responsive regulator gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1112 Theam_1113 Theam_1113 Theam_1113 1091559 1092950 - hydrolase%2C TatD family KEGG: tal:Thal_0233 hydrolase%2C TatD family~TIGRFAM: hydrolase%2C TatD family~PFAM: TatD-related deoxyribonuclease%3B Radical SAM domain protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1113 Theam_1114 Theam_1114 Theam_1114 1092947 1093678 - Sporulation domain-containing protein PFAM: Sporulation domain-containing protein~KEGG: sfu:Sfum_1170 sporulation domain-containing protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1114 Theam_1115 Theam_1115 Theam_1115 1093678 1095321 - arginyl-tRNA synthetase TIGRFAM: arginyl-tRNA synthetase~KEGG: ddf:DEFDS_1359 arginyl-tRNA synthetase gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1115 Theam_1116 Theam_1116 Theam_1116 1095383 1097626 + (NiFe) hydrogenase maturation protein HypF KEGG: aae:aq_672 transcriptional regulatory protein HypF~TIGRFAM: [NiFe] hydrogenase maturation protein HypF~PFAM: SUA5/yciO/yrdC domain%3B acylphosphatase gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1116 Theam_1117 Theam_1117 Theam_1117 1097623 1098795 + nickel-dependent hydrogenase large subunit PFAM: nickel-dependent hydrogenase large subunit~KEGG: mvo:Mvol_0587 coenzyme F420 hydrogenase%2C subunit alpha gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1117 Theam_1118 Theam_1118 Theam_1118 1098806 1099546 + coenzyme F420 hydrogenase%2C subunit gamma TIGRFAM: coenzyme F420 hydrogenase%2C subunit gamma~KEGG: mif:Metin_0513 hypothetical protein~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1118 Theam_1119 Theam_1119 Theam_1119 1099558 1100442 + coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein~KEGG: mmq:MmarC5_0646 coenzyme F420-reducing hydrogenase subunit beta gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1119 Theam_1120 Theam_1120 Theam_1120 1100442 1100735 + regulatory protein ArsR KEGG: hth:HTH_0226 transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1120 Theam_1121 Theam_1121 Theam_1121 1100947 1102029 + hydrogenase (NiFe) small subunit HydA TIGRFAM: hydrogenase (NiFe) small subunit HydA~KEGG: dps:DP0574 Ni/Fe-hydrogenase%2C small subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1121 Theam_1122 Theam_1122 Theam_1122 1102054 1103799 + nickel-dependent hydrogenase large subunit PFAM: nickel-dependent hydrogenase large subunit~KEGG: dps:DP0575 Ni/Fe-hydrogenase%2C large subunit gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1122 Theam_1123 Theam_1123 Theam_1123 1103841 1104488 + Ni/Fe-hydrogenase%2C b-type cytochrome subunit TIGRFAM: Ni/Fe-hydrogenase%2C b-type cytochrome subunit~KEGG: dps:DP0576 Ni/Fe-hydrogenase%2C cytochrome subunit gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1123 Theam_1124 Theam_1124 Theam_1124 1104560 1105093 + hydrogenase maturation protease KEGG: gur:Gura_1947 hydrogenase maturation protease~TIGRFAM: hydrogenase maturation protease~PFAM: peptidase M52 hydrogen uptake protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1124 Theam_1125 Theam_1125 Theam_1125 1105094 1105336 + hydrogenase assembly chaperone hypC/hupF KEGG: tgr:Tgr7_1272 hydrogenase assembly chaperone HypC/HupF~TIGRFAM: hydrogenase assembly chaperone hypC/hupF~PFAM: hydrogenase expression/formation protein (HUPF/HYPC) gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1125 Theam_1126 Theam_1126 Theam_1126 1105336 1105686 + hydrogenase expression/synthesis HypA PFAM: hydrogenase expression/synthesis HypA~KEGG: dap:Dacet_2414 hydrogenase expression/synthesis HypA gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1126 Theam_1127 Theam_1127 Theam_1127 1105688 1106386 + Methyltransferase type 11 PFAM: Methyltransferase type 11~KEGG: wch:wcw_1033 ubiquinone/menaquinone biosynthesis methyltransferase gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1127 Theam_1128 Theam_1128 Theam_1128 1106379 1107137 + hydrogenase accessory protein HypB KEGG: dps:DP0583 hydrogenase accessory protein HypB~TIGRFAM: hydrogenase accessory protein HypB~PFAM: cobalamin synthesis protein P47K gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1128 Theam_1129 Theam_1129 Theam_1129 1107204 1107494 + hypothetical protein KEGG: ssc:100049665 keratin 2 gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1129 Theam_1130 Theam_1130 Theam_1130 1107565 1108923 + outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: pmx:PERMA_0682 outer membrane efflux protein gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1130 Theam_1131 Theam_1131 Theam_1131 1108811 1110052 + efflux transporter%2C RND family%2C MFP subunit manually curated~TIGRFAM: efflux transporter%2C RND family%2C MFP subunit~KEGG: nis:NIS_1671 AcrA/AcrE family protein~PFAM: secretion protein HlyD family protein gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1131 Theam_1132 Theam_1132 Theam_1132 1110116 1110280 + Rubredoxin-type Fe(Cys)4 protein PFAM: Rubredoxin-type Fe(Cys)4 protein~KEGG: kol:Kole_2138 rubredoxin-type Fe(Cys)4 protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1132 Theam_1133 Theam_1133 Theam_1133 1110280 1111476 + flavodoxin/nitric oxide synthase KEGG: abi:Aboo_0876 flavodoxin/nitric oxide synthase gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1133 Theam_1134 Theam_1134 Theam_1134 1111454 1112950 - pseudogene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1134 Theam_1135 Theam_1135 Theam_1135 1112967 1113620 - pseudogene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1135 Theam_1136 Theam_1136 Theam_1136 1113604 1114032 - Biopolymer transport protein ExbD/TolR PFAM: Biopolymer transport protein ExbD/TolR~KEGG: hse:Hsero_0293 biopolymer transport ExbD/TolR protein gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1136 Theam_1137 Theam_1137 Theam_1137 1114090 1114581 + MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: pfl:PFL_0993 MotA/TolQ/ExbB proton channel family protein gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1137 Theam_1138 Theam_1138 Theam_1138 1114604 1116061 - glutamyl-tRNA(Gln) amidotransferase%2C B subunit KEGG: aae:aq_461 aspartyl/glutamyl-tRNA amidotransferase subunit B~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB region%3B Asn/Gln amidotransferase gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1138 Theam_1139 Theam_1139 Theam_1139 1116083 1117141 - hypothetical protein KEGG: cte:CT1965 hypothetical protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1139 Theam_1140 Theam_1140 Theam_1140 1117210 1119168 + penicillin-binding protein%2C 1A family TIGRFAM: penicillin-binding protein%2C 1A family~KEGG: sun:SUN_0350 penicillin-binding protein 1A~PFAM: glycosyl transferase family 51%3B penicillin-binding protein transpeptidase gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1140 Theam_1141 Theam_1141 Theam_1141 1119170 1121599 + DNA gyrase%2C A subunit SMART: DNA gyrase/topoisomerase IV subunit A~TIGRFAM: DNA gyrase%2C A subunit~KEGG: aoe:Clos_0007 DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1141 Theam_1142 Theam_1142 Theam_1142 1121592 1122875 + seryl-tRNA synthetase TIGRFAM: seryl-tRNA synthetase~KEGG: pmx:PERMA_1558 seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl-tRNA synthetase%2C class IIa-like gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1142 Theam_1143 Theam_1143 Theam_1143 1122891 1123295 - hypothetical protein KEGG: ddf:DEFDS_0858 hypothetical protein gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1143 Theam_1144 Theam_1144 Theam_1144 1123314 1124273 - hypothetical protein KEGG: ddf:DEFDS_0859 hypothetical protein gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1144 Theam_1145 Theam_1145 Theam_1145 1124270 1124713 - hypothetical protein KEGG: ddf:DEFDS_0860 hypothetical protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1145 Theam_1146 Theam_1146 Theam_1146 1124704 1125150 - hypothetical protein KEGG: ddf:DEFDS_0861 hypothetical protein gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1146 Theam_1147 Theam_1147 Theam_1147 1125154 1128831 - hypothetical protein KEGG: pmx:PERMA_1154 hypothetical protein gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1147 Theam_1148 Theam_1148 Theam_1148 1128828 1129166 - hypothetical protein KEGG: isc:IscW_ISCW014557 secreted protein%2C putative gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1148 Theam_1149 Theam_1149 Theam_1149 1129221 1130186 - ATP-binding region ATPase domain protein KEGG: pmx:PERMA_1156 hypothetical protein~PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1149 Theam_1150 Theam_1150 Theam_1150 1130183 1130827 - two component transcriptional regulator%2C winged helix family KEGG: pmx:PERMA_1157 two component transcriptional regulator%2C winged helix family~PFAM: transcriptional regulator domain-containing protein%3B response regulator receiver~SMART: response regulator receiver gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1150 Theam_1151 Theam_1151 Theam_1151 1130834 1131580 - ABC transporter related protein KEGG: pmx:PERMA_1853 ABC transporter~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1151 Theam_1152 Theam_1152 Theam_1152 1131552 1132073 - lipopolysaccharide transport periplasmic protein LptA KEGG: pmx:PERMA_1724 lipopolysaccharide transport periplasmic protein LptA~TIGRFAM: lipopolysaccharide transport periplasmic protein LptA~PFAM: OstA family protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1152 Theam_1153 Theam_1153 Theam_1153 1132070 1132600 - protein of unknown function DUF1239 PFAM: protein of unknown function DUF1239~KEGG: sbi:SORBI_03g037960 hypothetical protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1153 Theam_1154 Theam_1154 Theam_1154 1132590 1133063 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family KEGG: ppd:Ppro_0970 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase~TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1154 Theam_1155 Theam_1155 Theam_1155 1133060 1133611 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: aae:aq_1666 hypothetical protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1155 Theam_1156 Theam_1156 Theam_1156 1133656 1134900 - Cytochrome-c peroxidase KEGG: pmx:PERMA_1429 cytochrome c551 peroxidase (cytochrome cperoxidase) (CCP)~PFAM: Di-haem cytochrome c peroxidase gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1156 Theam_1157 Theam_1157 Theam_1157 1134969 1135586 - dethiobiotin synthase TIGRFAM: dethiobiotin synthase~KEGG: pmx:PERMA_0649 dethiobiotin synthase gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1157 Theam_1158 Theam_1158 Theam_1158 1135574 1135828 - hypothetical protein KEGG: abi:Aboo_1217 integrase family protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1158 Theam_1159 Theam_1159 Theam_1159 1135810 1136160 - flagellar protein FliS KEGG: pmx:PERMA_1617 flagellar protein FliS~TIGRFAM: flagellar protein FliS~PFAM: flagellar protein FliS gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1159 Theam_1160 Theam_1160 Theam_1160 1136170 1137519 - flagellar hook-associated 2 domain-containing protein PFAM: flagellar hook-associated 2 domain-containing protein%3B flagellar hook-associated protein 2 domain-containing protein~KEGG: pmx:PERMA_1618 putative flagellar hook-associated protein 2 FliD gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1160 Theam_1161 Theam_1161 Theam_1161 1137542 1137892 - flagellar protein FlaG protein PFAM: flagellar protein FlaG protein~KEGG: nis:NIS_0641 flagellar protein FlaG gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1161 Theam_1162 Theam_1162 Theam_1162 1137945 1138802 - flagellin domain protein PFAM: flagellin domain protein~KEGG: pmx:PERMA_1620 flagellar filament 34.5 kDa core protein (class B) gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1162 Theam_1163 Theam_1163 Theam_1163 1138786 1140060 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: saf:SULAZ_1215 glycosyl transferase%2C family 2 gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1163 Theam_1164 Theam_1164 Theam_1164 1140051 1140905 - hypothetical protein KEGG: cyt:cce_2734 hypothetical protein gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1164 Theam_1165 Theam_1165 Theam_1165 1140907 1142154 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: pmx:PERMA_1442 hypothetical protein gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1165 Theam_1166 Theam_1166 Theam_1166 1142203 1143318 - riboflavin biosynthesis protein RibD TIGRFAM: riboflavin biosynthesis protein RibD~KEGG: hth:HTH_0980 riboflavin biosynthesis protein~PFAM: bifunctional deaminase-reductase domain protein%3B CMP/dCMP deaminase zinc-binding gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1166 Theam_1167 Theam_1167 Theam_1167 1143320 1143412 - hypothetical protein gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1167 Theam_1168 Theam_1168 Theam_1168 1143409 1144476 - tryptophanyl-tRNA synthetase TIGRFAM: tryptophanyl-tRNA synthetase~KEGG: dtu:Dtur_1469 tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1168 Theam_1169 Theam_1169 Theam_1169 1144602 1145999 + hypothetical protein KEGG: nis:NIS_1693 hypothetical protein gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1169 Theam_1170 Theam_1170 Theam_1170 1145956 1146558 + membrane lipoprotein lipid attachment site TIGRFAM: membrane lipoprotein lipid attachment site~KEGG: pvi:Cvib_0158 membrane lipoprotein lipid attachment site gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1170 Theam_1171 Theam_1171 Theam_1171 1146572 1147912 + hypothetical protein KEGG: cjj:CJJ81176_0127 hypothetical protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1171 Theam_1172 Theam_1172 Theam_1172 1147930 1149123 + hypothetical protein KEGG: nis:NIS_1697 hypothetical protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1172 Theam_1173 Theam_1173 Theam_1173 1149129 1149854 - phosphoribosylaminoimidazole-succinocarboxamide synthase TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase~KEGG: cby:CLM_3274 phosphoribosylaminoimidazole-succinocarboxamide synthase~PFAM: SAICAR synthetase gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1173 Theam_1174 Theam_1174 Theam_1174 1149947 1151335 + amidophosphoribosyltransferase KEGG: pca:Pcar_1326 amidophosphoribosyltransferase~TIGRFAM: amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1174 Theam_1175 Theam_1175 Theam_1175 1151444 1151719 + hypothetical protein KEGG: tva:TVAG_150250 ankyrin repeat protein gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1175 Theam_1176 Theam_1176 Theam_1176 1151716 1153740 + Peptidoglycan glycosyltransferase KEGG: gsu:GSU3075 penicillin-binding protein~PFAM: penicillin-binding protein transpeptidase gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1176 Theam_1177 Theam_1177 Theam_1177 1153780 1155756 + threonyl-tRNA synthetase KEGG: tte:TTE1713 threonyl-tRNA synthetase~TIGRFAM: threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Threonyl/alanyl tRNA synthetase SAD%3B TGS domain-containing protein%3B Anticodon-binding domain protein gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1177 Theam_1178 Theam_1178 Theam_1178 1155874 1156302 + translation initiation factor IF-3 KEGG: gme:Gmet_1412 translation initiation factor IF-3~TIGRFAM: translation initiation factor IF-3~PFAM: Translation initiation factor 3-like gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1178 Theam_1179 Theam_1179 Theam_1179 1156346 1156543 + ribosomal protein L35 KEGG: cbf:CLI_3194 50S ribosomal protein L35~TIGRFAM: ribosomal protein L35~PFAM: Ribosomal protein L35 gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1179 Theam_1180 Theam_1180 Theam_1180 1156610 1156963 + ribosomal protein L20 KEGG: aae:aq_952 50S ribosomal protein L20~TIGRFAM: ribosomal protein L20~PFAM: ribosomal protein L20 gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1180 Theam_1181 Theam_1181 Theam_1181 1156985 1158100 - hypothetical protein KEGG: tal:Thal_1385 hypothetical protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1181 Theam_1182 Theam_1182 Theam_1182 1158103 1159863 - excinuclease ABC%2C C subunit TIGRFAM: excinuclease ABC%2C C subunit~PFAM: excinuclease ABC C subunit domain protein%3B Excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein~KEGG: pmx:PERMA_0927 excinuclease ABC subunit C~SMART: Excinuclease ABC C subunit domain protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1182 Theam_1183 Theam_1183 Theam_1183 1159860 1160510 - 6-pyruvoyl tetrahydropterin synthase and hypothetical protein PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein~KEGG: wsu:WS1659 hypothetical protein gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1183 Theam_1184 Theam_1184 Theam_1184 1160510 1161085 - methyltransferase KEGG: adg:Adeg_0116 methyltransferase~TIGRFAM: methyltransferase~PFAM: Conserved hypothetical protein CHP00095 gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1184 Theam_1185 Theam_1185 Theam_1185 1161153 1161743 + outer membrane lipoprotein carrier protein LolA PFAM: outer membrane lipoprotein carrier protein LolA~KEGG: aci:ACIAD2937 outer-membrane lipoproteins carrier protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1185 Theam_1186 Theam_1186 Theam_1186 1161721 1163499 - extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: pmx:PERMA_1125 transporter gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1186 Theam_1187 Theam_1187 Theam_1187 1163651 1164232 + hypothetical protein KEGG: ade:Adeh_3552 hypothetical protein gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1187 Theam_1188 Theam_1188 Theam_1188 1164290 1166704 + DNA gyrase%2C B subunit TIGRFAM: DNA gyrase%2C B subunit~PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B ATP-binding region ATPase domain protein%3B TOPRIM domain-containing protein%3B DNA gyrase subunit B domain protein~KEGG: sul:SYO3AOP1_0964 DNA gyrase%2C B subunit~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1188 Theam_1189 Theam_1189 Theam_1189 1173970 1174629 - cytidylate kinase KEGG: tte:TTE1350 cytidylate kinase~TIGRFAM: cytidylate kinase~PFAM: cytidylate kinase region gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1189 Theam_1190 Theam_1190 Theam_1190 1174630 1175946 - nicotinate phosphoribosyltransferase TIGRFAM: nicotinate phosphoribosyltransferase~KEGG: pmx:PERMA_0940 putative nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1190 Theam_1191 Theam_1191 Theam_1191 1175946 1176605 - DNA-(apurinic or apyrimidinic site) lyase PFAM: HhH-GPD family protein%3B iron-sulfur cluster loop~KEGG: sul:SYO3AOP1_1273 DNA-(apurinic or apyrimidinic site) lyase~SMART: HhH-GPD family protein%3B iron-sulfur cluster loop gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1191 Theam_1192 Theam_1192 Theam_1192 1176571 1177380 - 2-dehydro-3-deoxyphosphooctonate aldolase KEGG: hth:HTH_1426 2-dehydro-3-deoxyphosphooctonate aldolase~TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase~PFAM: DAHP synthetase I/KDSA gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1192 Theam_1193 Theam_1193 Theam_1193 1177392 1178018 - hypothetical protein KEGG: dma:DMR_24750 hypothetical protein gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1193 Theam_1194 Theam_1194 Theam_1194 1178044 1178799 - pseudouridine synthase KEGG: adg:Adeg_1292 pseudouridine synthase~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1194 Theam_1195 Theam_1195 Theam_1195 1178865 1179530 + deoxyribose-phosphate aldolase TIGRFAM: deoxyribose-phosphate aldolase~KEGG: tko:TK2104 deoxyribose-phosphate aldolase~PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1195 Theam_1196 Theam_1196 Theam_1196 1179478 1180356 + riboflavin biosynthesis protein RibF KEGG: sul:SYO3AOP1_0363 riboflavin biosynthesis protein RibF~TIGRFAM: riboflavin biosynthesis protein RibF%3B cytidyltransferase-related domain protein~PFAM: Riboflavin kinase%3B FAD synthetase gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1196 Theam_1197 Theam_1197 Theam_1197 1180334 1181251 + GTP-binding protein Era KEGG: aae:aq_1994 GTP-binding protein Era~TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B KH type 2 domain protein gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1197 Theam_1198 Theam_1198 Theam_1198 1181261 1181659 + ABC transporter EcsB KEGG: dhd:Dhaf_2497 ABC transporter EcsB gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1198 Theam_1199 Theam_1199 Theam_1199 1181656 1182066 + hypothetical protein KEGG: pic:PICST_65683 U3 snoRNP protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1199 Theam_1200 Theam_1200 Theam_1200 1182053 1182769 + pseudouridine synthase KEGG: sul:SYO3AOP1_1696 RNA-binding S4 domain protein~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1200 Theam_1201 Theam_1201 Theam_1201 1182838 1183071 + hypothetical protein KEGG: tal:Thal_0847 hypothetical protein gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1201 Theam_1202 Theam_1202 Theam_1202 1183262 1184335 - hypothetical protein KEGG: pjd:Pjdr2_6117 helix-turn-helix type 11 domain protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1202 Theam_1203 Theam_1203 Theam_1203 1184390 1185421 + phenylalanyl-tRNA synthetase%2C alpha subunit KEGG: gur:Gura_2624 phenylalanyl-tRNA synthetase subunit alpha~TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1203 Theam_1204 Theam_1204 Theam_1204 1185424 1187808 + phenylalanyl-tRNA synthetase%2C beta subunit TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit~KEGG: tte:TTE1688 phenylalanyl-tRNA synthetase subunit beta gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1204 Theam_1205 Theam_1205 Theam_1205 1187818 1188114 + hypothetical protein KEGG: tye:THEYE_A0621 hypothetical protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1205 Theam_1206 Theam_1206 Theam_1206 1188156 1188710 + 5-formyltetrahydrofolate cyclo-ligase KEGG: tal:Thal_0219 5-formyltetrahydrofolate cyclo-ligase~TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase~PFAM: 5-formyltetrahydrofolate cyclo-ligase gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1206 Theam_1207 Theam_1207 Theam_1207 1188710 1190383 + metal dependent phosphohydrolase TIGRFAM: YmdA/YtgF protein%3B metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B K Homology%2C type 1%2C subgroup~KEGG: chy:CHY_1168 HDIG/KH domain-containing protein~SMART: metal-dependent phosphohydrolase HD region%3B KH domain protein gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1207 Theam_1208 Theam_1208 Theam_1208 1190373 1192283 + selenocysteine-specific translation elongation factor KEGG: gme:Gmet_3415 selenocysteine-specific translation elongation factor SelB~TIGRFAM: selenocysteine-specific translation elongation factor%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B Elongation factor SelB winged helix 2%3B Elongation factor SelB winged helix 3 gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1208 Theam_1209 Theam_1209 Theam_1209 1192280 1193167 + Auxin Efflux Carrier PFAM: Auxin Efflux Carrier~KEGG: amr:AM1_4274 auxin efflux carrier%2C putative gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1209 Theam_1210 Theam_1210 Theam_1210 1193169 1193807 + hypothetical protein KEGG: sul:SYO3AOP1_0813 hypothetical protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1210 Theam_1211 Theam_1211 Theam_1211 1193821 1195005 + phosphoribosylglycinamide formyltransferase 2 KEGG: pmx:PERMA_1489 phosphoribosylglycinamide formyltransferase 2~TIGRFAM: phosphoribosylglycinamide formyltransferase 2~PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1211 Theam_1212 Theam_1212 Theam_1212 1194998 1195555 + peptide methionine sulfoxide reductase TIGRFAM: peptide methionine sulfoxide reductase~KEGG: bbe:BBR47_26820 probable peptide methionine sulfoxide reductase MsrA/MsrB~PFAM: Methionine sulfoxide reductase A gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1212 Theam_1213 Theam_1213 Theam_1213 1195552 1196289 + Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: pmx:PERMA_0286 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1213 Theam_1214 Theam_1214 Theam_1214 1196286 1197020 - ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: cpo:COPRO5265_0017 hypothetical protein gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1214 Theam_1215 Theam_1215 Theam_1215 1197013 1197834 - pyrroline-5-carboxylate reductase PFAM: NADP oxidoreductase coenzyme F420-dependent~manually curated~KEGG: hoh:Hoch_4718 pyrroline-5-carboxylate reductase~TIGRFAM: pyrroline-5-carboxylate reductase gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1215 Theam_1216 Theam_1216 Theam_1216 1197989 1198099 - hypothetical protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1216 Theam_1217 Theam_1217 Theam_1217 1198148 1198879 - Phosphomethylpyrimidine kinase KEGG: abi:Aboo_1311 phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1 gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1217 Theam_1218 Theam_1218 Theam_1218 1199032 1199484 + sugar-phosphate isomerase%2C RpiB/LacA/LacB family TIGRFAM: sugar-phosphate isomerase%2C RpiB/LacA/LacB family%3B ribose 5-phosphate isomerase B~KEGG: ddf:DEFDS_0484 ribose 5-phosphate isomerase B~PFAM: Ribose/galactose isomerase gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1218 Theam_1219 Theam_1219 Theam_1219 1199489 1200745 + Glycine hydroxymethyltransferase KEGG: ddf:DEFDS_0485 glycine hydroxymethyltransferase~PFAM: glycine hydroxymethyltransferase gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1219 Theam_1220 Theam_1220 Theam_1220 1200854 1201669 + MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: nam:NAMH_0060 MscS mechanosensitive ion channel gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1220 Theam_1221 Theam_1221 Theam_1221 1201737 1203383 - chaperonin GroEL KEGG: pmx:PERMA_2026 chaperonin GroEL~TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1 gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1221 Theam_1222 Theam_1222 Theam_1222 1203409 1203699 - Chaperonin Cpn10 PFAM: Chaperonin Cpn10~KEGG: saf:SULAZ_1700 chaperonin GroS gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1222 Theam_1223 Theam_1223 Theam_1223 1203818 1204732 - transglutaminase domain-containing protein KEGG: sli:Slin_0138 transglutaminase domain protein~PFAM: transglutaminase domain-containing protein~SMART: transglutaminase domain-containing protein gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1223 Theam_1224 Theam_1224 Theam_1224 1204732 1205091 - hypothetical protein KEGG: bwe:BcerKBAB4_2365 hypothetical protein gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1224 Theam_1225 Theam_1225 Theam_1225 1205101 1206288 - phosphate-selective porin O and P PFAM: phosphate-selective porin O and P~KEGG: sbl:Sbal_3436 phosphate-selective porin O and P gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1225 Theam_1226 Theam_1226 Theam_1226 1206298 1209816 - molybdopterin dinucleotide-binding region protein PFAM: molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase%3B molybdopterin oxidoreductase Fe4S4 region~KEGG: dma:DMR_26720 molybdopterin oxidoreductase gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1226 Theam_1227 Theam_1227 Theam_1227 1209966 1210712 + hypothetical protein KEGG: geo:Geob_1193 hypothetical protein gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1227 Theam_1228 Theam_1228 Theam_1228 1212252 1212656 + putative signal transduction protein with CBS domains KEGG: pmx:PERMA_0044 cbs domain containing protein~PFAM: CBS domain containing protein~SMART: CBS domain containing protein gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1228 Theam_1229 Theam_1229 Theam_1229 1212657 1213385 + chromosome segregation and condensation protein ScpA PFAM: chromosome segregation and condensation protein ScpA~KEGG: tye:THEYE_A0360 segregation and condensation protein A gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1229 Theam_1230 Theam_1230 Theam_1230 1213354 1214145 - integrase domain protein SAM domain protein PFAM: integrase domain protein SAM domain protein~KEGG: pab:PAB0255 integrase/recombinase XerD gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1230 Theam_1231 Theam_1231 Theam_1231 1214121 1215755 - Lytic transglycosylase catalytic KEGG: pmx:PERMA_1898 transglycosylase SLT domain protein~PFAM: Lytic transglycosylase catalytic~SMART: Tetratricopeptide repeat gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1231 Theam_1232 Theam_1232 Theam_1232 1215909 1216751 - hypothetical protein KEGG: dth:DICTH_0368 iron-sulfur cluster-binding protein gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1232 Theam_1233 Theam_1233 Theam_1233 1216751 1216888 - hypothetical protein KEGG: tde:TDE2370 hypothetical protein gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1233 Theam_1234 Theam_1234 Theam_1234 1216881 1217765 - ATPase-like%2C ParA/MinD PFAM: ATPase-like%2C ParA/MinD~KEGG: ddf:DEFDS_1268 ATP-binding protein%2C CobQ/CobB/MinD/ParA family gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1234 Theam_1235 Theam_1235 Theam_1235 1217777 1218556 - inositol monophosphatase PFAM: inositol monophosphatase~KEGG: cbc:CbuK_1000 myo-inositol-1(or 4)-monophosphatase gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1235 Theam_1236 Theam_1236 Theam_1236 1218540 1218794 - hypothetical protein KEGG: nth:Nther_1824 threonyl-tRNA synthetase gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1236 Theam_1237 Theam_1237 Theam_1237 1218855 1219493 + two component transcriptional regulator%2C winged helix family KEGG: aae:aq_319 transcriptional regulator (PhoB-like)~PFAM: response regulator receiver%3B transcriptional regulator domain-containing protein~SMART: response regulator receiver gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1237 Theam_1238 Theam_1238 Theam_1238 1219486 1220397 + histidine kinase KEGG: adg:Adeg_1012 multi-sensor signal transduction histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1238 Theam_1239 Theam_1239 Theam_1239 1220335 1220994 - hypothetical protein KEGG: gtn:GTNG_2068 hypothetical protein gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1239 Theam_1240 Theam_1240 Theam_1240 1221266 1221649 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: nis:NIS_1047 hypothetical protein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1240 Theam_1241 Theam_1241 Theam_1241 1221658 1222251 - hypothetical protein KEGG: aae:aq_678 hypothetical protein gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1241 Theam_1242 Theam_1242 Theam_1242 1222331 1223428 + peptide chain release factor 1 KEGG: pmx:PERMA_0200 peptide chain release factor 1~TIGRFAM: peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1242 Theam_1243 Theam_1243 Theam_1243 1223425 1223904 - hypothetical protein KEGG: pmx:PERMA_0118 hypothetical protein gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1243 Theam_1244 Theam_1244 Theam_1244 1223987 1225117 + Radical SAM domain protein KEGG: gem:GM21_0014 radical SAM domain protein~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1244 Theam_1245 Theam_1245 Theam_1245 1225101 1226024 + hypothetical protein KEGG: mes:Meso_2397 hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1245 Theam_1246 Theam_1246 Theam_1246 1226025 1226843 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase KEGG: saf:SULAZ_1721 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1246 Theam_1247 Theam_1247 Theam_1247 1226909 1228489 + methionyl-tRNA synthetase KEGG: ddf:DEFDS_0066 methionyl-tRNA synthetase~TIGRFAM: methionyl-tRNA synthetase~PFAM: tRNA synthetase class I (M) gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1247 Theam_1248 Theam_1248 Theam_1248 1228516 1229367 - TM1410 hypothetical-related protein PFAM: TM1410 hypothetical-related protein~KEGG: mmw:Mmwyl1_0681 endo alpha-1%2C4 polygalactosaminidase precusor gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1248 Theam_1249 Theam_1249 Theam_1249 1229312 1230571 - adenosylhomocysteinase TIGRFAM: adenosylhomocysteinase~KEGG: aae:aq_1180 S-adenosyl-L-homocysteine hydrolase~PFAM: S-adenosyl-L-homocysteine hydrolase%2C NAD binding%3B S-adenosyl-L-homocysteine hydrolase gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1249 Theam_1250 Theam_1250 Theam_1250 1230581 1231591 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase KEGG: tye:THEYE_A0092 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase~PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase%2C non-repeat region%3B transferase hexapeptide repeat containing protein gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1250 Theam_1251 Theam_1251 Theam_1251 1231588 1232121 - outer membrane chaperone Skp (OmpH) PFAM: outer membrane chaperone Skp (OmpH)~KEGG: glo:Glov_0761 outer membrane chaperone Skp (OmpH) gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1251 Theam_1252 Theam_1252 Theam_1252 1232141 1234435 - outer membrane protein assembly complex%2C YaeT protein KEGG: sul:SYO3AOP1_1574 outer membrane protein assembly complex%2C YaeT protein~TIGRFAM: outer membrane protein assembly complex%2C YaeT protein~PFAM: surface antigen (D15)%3B surface antigen variable number repeat-containing protein gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1252 Theam_1253 Theam_1253 Theam_1253 1234469 1235623 - PAS/PAC sensor signal transduction histidine kinase KEGG: hth:HTH_1082 sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1253 Theam_1254 Theam_1254 Theam_1254 1235698 1236705 + glyceraldehyde-3-phosphate dehydrogenase%2C type I TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: Glyceraldehyde 3-phosphate dehydrogenase%2C NAD(P) binding domain%3B Glyceraldehyde 3-phosphate dehydrogenase%2C catalytic domain gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1254 Theam_1255 Theam_1255 Theam_1255 1236702 1237307 - Colicin V production protein PFAM: Colicin V production protein~KEGG: gfo:GFO_3421 colicin V production protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1255 Theam_1256 Theam_1256 Theam_1256 1237279 1238148 - nicotinate-nucleotide pyrophosphorylase TIGRFAM: nicotinate-nucleotide pyrophosphorylase~KEGG: gvi:gvip119 nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1256 Theam_1257 Theam_1257 Theam_1257 1238168 1238707 + CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: saf:SULAZ_0786 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1257 Theam_1258 Theam_1258 Theam_1258 1238700 1239761 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: tmt:Tmath_1095 protein of unknown function UPF0118 gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1258 Theam_1259 Theam_1259 Theam_1259 1239739 1240311 + dephospho-CoA kinase KEGG: tte:TTE0875 dephospho-CoA kinase~TIGRFAM: dephospho-CoA kinase~PFAM: Dephospho-CoA kinase gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1259 Theam_1260 Theam_1260 Theam_1260 1240308 1241108 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: hth:HTH_0005 metallophosphoesterase gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1260 Theam_1261 Theam_1261 Theam_1261 1241086 1241940 + Methylenetetrahydrofolate dehydrogenase (NADP(+)) KEGG: aae:aq_1898 methylenetetrahydrofolate dehydrogenase~PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain%3B Tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1261 Theam_1262 Theam_1262 Theam_1262 1241937 1242131 + pseudogene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1262 Theam_1263 Theam_1263 Theam_1263 1242187 1242648 + hypothetical protein KEGG: tal:Thal_0442 hypothetical protein gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1263 Theam_1264 Theam_1264 Theam_1264 1242902 1243189 + RNA-binding S4 domain protein KEGG: pth:PTH_0122 ribosome-associated heat shock protein~PFAM: RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1264 Theam_1265 Theam_1265 Theam_1265 1243198 1244793 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: aae:aq_999 long-chain-fatty-acid CoA ligase gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1265 Theam_1266 Theam_1266 Theam_1266 1244790 1245599 + diaminopimelate epimerase KEGG: tal:Thal_1287 diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase~PFAM: diaminopimelate epimerase gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1266 Theam_1267 Theam_1267 Theam_1267 1245557 1246264 + phage SPO1 DNA polymerase-related protein KEGG: ddf:DEFDS_1425 uracil-DNA glycosylase~TIGRFAM: phage SPO1 DNA polymerase-related protein~PFAM: Uracil-DNA glycosylase superfamily gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1267 Theam_1268 Theam_1268 Theam_1268 1246261 1246905 + iron-sulfur cluster loop protein KEGG: mtp:Mthe_0911 HhH-GPD family protein~PFAM: iron-sulfur cluster loop~SMART: HhH-GPD family protein%3B iron-sulfur cluster loop gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1268 Theam_1269 Theam_1269 Theam_1269 1246890 1248167 - Radical SAM domain protein KEGG: tjr:TherJR_0789 radical SAM domain protein~PFAM: Radical SAM domain protein%3B cobalamin B12-binding domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1269 Theam_1270 Theam_1270 Theam_1270 1248168 1249019 - CoB--CoM heterodisulfide reductase KEGG: nam:NAMH_1123 CoB--CoM heterodisulfide reductase subunit B~PFAM: protein of unknown function DUF224 cysteine-rich region domain protein gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1270 Theam_1271 Theam_1271 Theam_1271 1249012 1250133 - succinate dehydrogenase and fumarate reductase iron-sulfur protein TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~KEGG: nam:NAMH_1124 succinate dehydrogenase/fumarate reductase iron-sulfur protein~PFAM: ferredoxin gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1271 Theam_1272 Theam_1272 Theam_1272 1250147 1251841 - succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit KEGG: aae:aq_594 fumarate reductase flavoprotein subunit~TIGRFAM: succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1272 Theam_1273 Theam_1273 Theam_1273 1252016 1253716 + succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit KEGG: pmx:PERMA_1387 succinate dehydrogenase%2C flavoprotein subunit~TIGRFAM: succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1273 Theam_1274 Theam_1274 Theam_1274 1253726 1254691 + succinate dehydrogenase and fumarate reductase iron-sulfur protein KEGG: gme:Gmet_0309 succinate dehydrogenase subunit B~TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1274 Theam_1275 Theam_1275 Theam_1275 1254691 1255554 + CoB--CoM heterodisulfide reductase KEGG: sul:SYO3AOP1_0375 CoB--CoM heterodisulfide reductase~PFAM: protein of unknown function DUF224 cysteine-rich region domain protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1275 Theam_1276 Theam_1276 Theam_1276 1255648 1256973 + outer membrane efflux protein PFAM: outer membrane efflux protein~KEGG: hya:HY04AAS1_1390 outer membrane efflux protein gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1276 Theam_1277 Theam_1277 Theam_1277 1256983 1257360 + ATPase KEGG: dol:Dole_2696 ATPase gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1277 Theam_1278 Theam_1278 Theam_1278 1257357 1258688 - anion transporter KEGG: aae:aq_031 transporter~TIGRFAM: anion transporter~PFAM: sodium/sulphate symporter gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1278 Theam_1279 Theam_1279 Theam_1279 1258700 1260100 - pyruvate kinase TIGRFAM: pyruvate kinase~KEGG: chy:CHY_1144 pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1279 Theam_1280 Theam_1280 Theam_1280 1260159 1260710 + 2'-5' RNA ligase KEGG: mth:MTH583 hypothetical protein~TIGRFAM: 2'-5' RNA ligase~PFAM: Phosphoesterase HXTX gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1280 Theam_1281 Theam_1281 Theam_1281 1260703 1261860 + protein of unknown function DUF445 PFAM: protein of unknown function DUF445~KEGG: lsg:lse_2204 hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1281 Theam_1282 Theam_1282 Theam_1282 1261875 1263260 + phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase~KEGG: aae:aq_501 phosphoglucomutase/phosphomannomutase gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1282 Theam_1283 Theam_1283 Theam_1283 1263271 1264158 + putative circadian clock protein%2C KaiC PFAM: Circadian clock protein KaiC central region~KEGG: tal:Thal_0874 putative circadian clock protein%2C KaiC gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1283 Theam_1284 Theam_1284 Theam_1284 1264158 1264604 + P450 cytochrome%2C putative KEGG: afu:AF1126 P450 cytochrome%2C putative gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1284 Theam_1285 Theam_1285 Theam_1285 1264558 1265817 + hypothetical protein KEGG: tnp:Tnap_1041 tetratricopeptide TPR_2 repeat protein gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1285 Theam_1286 Theam_1286 Theam_1286 1265808 1266650 + hypothetical protein KEGG: ddi:DDB_G0284917 hypothetical protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1286 Theam_1287 Theam_1287 Theam_1287 1266652 1267158 + Shikimate kinase KEGG: pmx:PERMA_1404 shikimate kinase~PFAM: shikimate kinase gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1287 Theam_1288 Theam_1288 Theam_1288 1267134 1268030 - hypothetical protein KEGG: saf:SULAZ_0945 hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1288 Theam_1289 Theam_1289 Theam_1289 1268014 1268982 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: aae:aq_1899 dolichol-phosphate mannosyltransferase gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1289 Theam_1290 Theam_1290 Theam_1290 1268969 1270531 - glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: pmx:PERMA_0510 putative dolichyl-phosphate-mannose-protein mannosyltransferase family protein gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1290 Theam_1291 Theam_1291 Theam_1291 1270580 1270837 + hypothetical protein KEGG: mfs:MFS40622_0899 DNA methylase N-4/N-6 domain protein gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1291 Theam_1292 Theam_1292 Theam_1292 1270815 1272422 + glycosyl transferase family 39 PFAM: glycosyl transferase family 39~KEGG: afw:Anae109_0521 glycosyl transferase family protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1292 Theam_1293 Theam_1293 Theam_1293 1272319 1273125 - Silent information regulator protein Sir2 PFAM: Silent information regulator protein Sir2~KEGG: pcl:Pcal_1963 NAD-dependent deacetylase gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1293 Theam_1294 Theam_1294 Theam_1294 1273229 1273756 + hypothetical protein KEGG: ppa:PAS_chr1-4_0438 hypothetical protein gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1294 Theam_1295 Theam_1295 Theam_1295 1273772 1274305 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: eay:EAM_2277 acetyltransferase gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1295 Theam_1296 Theam_1296 Theam_1296 1274583 1275302 + putative metal-dependent hydrolase KEGG: dat:HRM2_43600 putative metal-dependent hydrolase gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1296 Theam_1297 Theam_1297 Theam_1297 1275303 1276649 + signal recognition particle protein TIGRFAM: signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B GTP-binding signal recognition particle SRP54 helical bundle%3B Signal peptide binding (SRP54) M- domain protein~KEGG: tjr:TherJR_2051 signal recognition particle protein~SMART: AAA ATPase gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1297 Theam_1298 Theam_1298 Theam_1298 1276715 1276945 + ribosomal protein S16 KEGG: msy:MS53_0010 30S ribosomal protein S16~TIGRFAM: ribosomal protein S16~PFAM: ribosomal protein S16 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1298 Theam_1299 Theam_1299 Theam_1299 1276959 1277198 + hypothetical protein KEGG: pmx:PERMA_1431 hypothetical protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1299 Theam_1300 Theam_1300 Theam_1300 1277210 1277785 - hypothetical protein KEGG: swo:Swol_0336 diguanylate cyclase/phosphodiesterase gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1300 Theam_1301 Theam_1301 Theam_1301 1277812 1278477 - transaldolase KEGG: aae:aq_119 putative translaldolase~TIGRFAM: transaldolase~PFAM: Transaldolase gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1301 Theam_1302 Theam_1302 Theam_1302 1278461 1278949 - membrane-bound metal-dependent hydrolase PFAM: membrane-bound metal-dependent hydrolase~KEGG: ckr:CKR_P16 hypothetical protein gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1302 Theam_1303 Theam_1303 Theam_1303 1278946 1279593 - hypothetical protein KEGG: aae:aq_2135 hypothetical protein gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1303 Theam_1304 Theam_1304 Theam_1304 1279596 1280141 - hypothetical protein KEGG: pmx:PERMA_0982 RtsE gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1304 Theam_1305 Theam_1305 Theam_1305 1280128 1281387 - cation diffusion facilitator family transporter KEGG: nam:NAMH_0349 hypothetical protein~TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1305 Theam_1306 Theam_1306 Theam_1306 1281388 1282893 - HerA-ATP synthase%2C barrel domain protein PFAM: HerA-ATP synthase%2C barrel domain~KEGG: msi:Msm_0122 ATPase gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1306 Theam_1307 Theam_1307 Theam_1307 1282959 1283273 + protein of unknown function DUF77 PFAM: protein of unknown function DUF77~KEGG: pmx:PERMA_1600 hypothetical protein gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1307 Theam_1308 Theam_1308 Theam_1308 1283624 1284025 - protein of unknown function UPF0047 PFAM: protein of unknown function UPF0047~KEGG: trq:TRQ2_0947 hypothetical protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1308 Theam_1309 Theam_1309 Theam_1309 1284071 1284922 - pantoate/beta-alanine ligase KEGG: trq:TRQ2_1740 pantoate--beta-alanine ligase~TIGRFAM: pantoate/beta-alanine ligase%3B cytidyltransferase-related domain protein~PFAM: Pantoate-beta-alanine ligase gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1309 Theam_1310 Theam_1310 Theam_1310 1284919 1285725 - ribonuclease BN PFAM: ribonuclease BN~KEGG: dal:Dalk_4508 ribonuclease BN gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1310 Theam_1311 Theam_1311 Theam_1311 1285722 1286063 - hypothetical protein KEGG: sul:SYO3AOP1_0749 hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1311 Theam_1312 Theam_1312 Theam_1312 1286074 1287132 - glutamate 5-kinase TIGRFAM: glutamate 5-kinase~PFAM: aspartate/glutamate/uridylate kinase%3B PUA domain containing protein~KEGG: gme:Gmet_3198 gamma-glutamyl kinase~SMART: PUA domain containing protein gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1312 Theam_1313 Theam_1313 Theam_1313 1287101 1288138 - GTP-binding protein Obg/CgtA KEGG: saf:SULAZ_0408 GTPase ObgE~TIGRFAM: GTP-binding protein Obg/CgtA%3B small GTP-binding protein~PFAM: GTP1/OBG sub domain protein%3B GTP-binding protein HSR1-related gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1313 Theam_1314 Theam_1314 Theam_1314 1288209 1288709 + hypothetical protein KEGG: gtn:GTNG_0648 hypothetical protein gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1314 Theam_1315 Theam_1315 Theam_1315 1288722 1289036 + hypothetical protein KEGG: ddi:DDB_G0282241 hypothetical protein gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1315 Theam_1316 Theam_1316 Theam_1316 1289026 1289775 + methyltransferase small PFAM: methyltransferase small~KEGG: saf:SULAZ_0835 SAM-dependent methyltransferase gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1316 Theam_1317 Theam_1317 Theam_1317 1289813 1290148 + hypothetical protein KEGG: pmf:P9303_12041 hypothetical protein gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1317 Theam_1318 Theam_1318 Theam_1318 1290123 1290608 - putative phosphohistidine phosphatase%2C SixA PFAM: Phosphoglycerate mutase~KEGG: nis:NIS_1147 phosphohistidine phosphatase gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1318 Theam_1319 Theam_1319 Theam_1319 1290584 1292596 - Polyphosphate kinase TIGRFAM: Polyphosphate kinase~KEGG: nis:NIS_0328 polyphosphate kinase~PFAM: Polyphosphate kinase gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1319 Theam_1320 Theam_1320 Theam_1320 1292583 1293458 - Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase~KEGG: bcq:BCQ_3782 exopolyphosphatase%2C Ppx/GppA phosphatase gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1320 Theam_1321 Theam_1321 Theam_1321 1293509 1294840 - FAD-dependent pyridine nucleotide-disulfide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: trq:TRQ2_0544 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1321 Theam_1322 Theam_1322 Theam_1322 1294948 1295817 + hypothetical protein KEGG: nis:NIS_0012 hypothetical protein gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1322 Theam_1323 Theam_1323 Theam_1323 1295835 1296770 - Fructose-bisphosphatase KEGG: saf:SULAZ_1502 fructose-1%2C6-bisphosphatase~PFAM: Inositol phosphatase/fructose-16-bisphosphatase gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1323 Theam_1324 Theam_1324 Theam_1324 1296795 1297832 - radical SAM enzyme%2C Cfr family TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM domain protein~KEGG: saf:SULAZ_0129 ribosomal RNA large subunit methyltransferase N~SMART: Elongator protein 3/MiaB/NifB gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1324 Theam_1325 Theam_1325 Theam_1325 1297801 1297929 - hypothetical protein gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1325 Theam_1326 Theam_1326 Theam_1326 1297929 1298099 - protein of unknown function DUF343 PFAM: protein of unknown function DUF343~KEGG: tal:Thal_0599 protein of unknown function DUF343 gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1326 Theam_1327 Theam_1327 Theam_1327 1298537 1299868 + histidinol dehydrogenase TIGRFAM: histidinol dehydrogenase~KEGG: aae:aq_782 histidinol dehydrogenase~PFAM: Histidinol dehydrogenase gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1327 Theam_1328 Theam_1328 Theam_1328 1299865 1300800 + aspartate carbamoyltransferase KEGG: sul:SYO3AOP1_0541 aspartate carbamoyltransferase~TIGRFAM: aspartate carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain%3B aspartate/ornithine carbamoyltransferase Asp/Orn-binding region gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1328 Theam_1329 Theam_1329 Theam_1329 1300797 1301147 + hypothetical protein KEGG: gur:Gura_0469 hypothetical protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1329 Theam_1330 Theam_1330 Theam_1330 1301140 1302423 + dihydroorotase%2C multifunctional complex type KEGG: dap:Dacet_1413 dihydroorotase%2C multifunctional complex type~TIGRFAM: dihydroorotase%2C multifunctional complex type~PFAM: amidohydrolase gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1330 Theam_1331 Theam_1331 Theam_1331 1302436 1303308 + periplasmic serine protease KEGG: pmx:PERMA_1711 periplasmic serine protease gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1331 Theam_1332 Theam_1332 Theam_1332 1303318 1303809 + transcriptional regulator%2C CarD family PFAM: transcription factor CarD~KEGG: mta:Moth_2489 CarD family transcriptional regulator gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1332 Theam_1333 Theam_1333 Theam_1333 1303809 1304786 + PilT protein domain protein KEGG: dau:Daud_0185 PilT domain-containing protein~PFAM: PilT protein domain protein~SMART: Nucleotide binding protein PINc gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1333 Theam_1334 Theam_1334 Theam_1334 1304783 1305484 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KEGG: ppd:Ppro_2969 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase~PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1334 Theam_1335 Theam_1335 Theam_1335 1305487 1306137 + transcriptional regulator%2C Crp/Fnr family KEGG: drt:Dret_1279 transcriptional regulator%2C Crp/Fnr family~PFAM: cyclic nucleotide-binding%3B regulatory protein Crp~SMART: cyclic nucleotide-binding gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1335 Theam_1336 Theam_1336 Theam_1336 1306109 1306438 - hypothetical protein KEGG: cpf:CPF_0219 hypothetical protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1336 Theam_1337 Theam_1337 Theam_1337 1306535 1308490 - carbon-monoxide dehydrogenase%2C catalytic subunit TIGRFAM: carbon-monoxide dehydrogenase%2C catalytic subunit~KEGG: fpl:Ferp_2369 carbon-monoxide dehydrogenase%2C catalytic subunit~PFAM: Prismane gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1337 Theam_1338 Theam_1338 Theam_1338 1308671 1309042 + Dinitrogenase iron-molybdenum cofactor biosynthesis protein PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein~KEGG: kcr:Kcr_0465 dinitrogenase iron-molybdenum cofactor biosynthesis protein gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1338 Theam_1339 Theam_1339 Theam_1339 1309039 1309614 + protein of unknown function DUF1847 PFAM: protein of unknown function DUF1847~KEGG: mbu:Mbur_2077 hypothetical protein gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1339 Theam_1340 Theam_1340 Theam_1340 1309808 1309948 + hypothetical protein KEGG: ptm:GSPATT00011913001 hypothetical protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1340 Theam_1341 Theam_1341 Theam_1341 1310000 1310701 - sugar fermentation stimulation protein KEGG: sul:SYO3AOP1_0168 sugar fermentation stimulation protein~TIGRFAM: sugar fermentation stimulation protein~PFAM: sugar fermentation stimulation protein gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1341 Theam_1342 Theam_1342 Theam_1342 1310679 1311326 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: pmt:PMT1252 putative alpha-ribazole-5'-P phosphatase gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1342 Theam_1343 Theam_1343 Theam_1343 1311448 1312875 + glutamate synthase (NADPH)%2C homotetrameric KEGG: pmx:PERMA_0627 glutamate synthase (NADPH)%2C homotetrameric~TIGRFAM: glutamate synthase (NADPH)%2C homotetrameric~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1343 Theam_1344 Theam_1344 Theam_1344 1312895 1313443 - Protein of unknown function DUF2168 PFAM: Protein of unknown function DUF2168~KEGG: chy:CHY_1429 hypothetical protein gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1344 Theam_1345 Theam_1345 Theam_1345 1313482 1315014 - serine/threonine protein kinase KEGG: nth:Nther_0295 ABC-1 domain protein~PFAM: ABC-1 domain-containing protein%3B aminoglycoside phosphotransferase~SMART: serine/threonine protein kinase gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1345 Theam_1346 Theam_1346 Theam_1346 1315014 1315337 - hypothetical protein KEGG: mev:Metev_1517 hypothetical protein gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1346 Theam_1347 Theam_1347 Theam_1347 1315405 1317351 + Organic solvent tolerance protein PFAM: Organic solvent tolerance protein%3B OstA family protein~KEGG: geo:Geob_1869 organic solvent tolerance protein gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1347 Theam_1348 Theam_1348 Theam_1348 1317329 1318186 - hypothetical protein KEGG: gur:Gura_2673 hypothetical protein gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1348 Theam_1349 Theam_1349 Theam_1349 1318186 1318986 - hypothetical protein KEGG: gur:Gura_2674 hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1349 Theam_1350 Theam_1350 Theam_1350 1318983 1319861 - ABC transporter related protein KEGG: glo:Glov_2089 ABC transporter related~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1350 Theam_1351 Theam_1351 Theam_1351 1319861 1320397 - hypothetical protein KEGG: tin:Tint_0644 Tfp pilus assembly protein PilE-like protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1351 Theam_1352 Theam_1352 Theam_1352 1320488 1321066 - fimbrial protein pilin KEGG: ade:Adeh_0635 fimbrial protein pilin gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1352 Theam_1353 Theam_1353 Theam_1353 1321269 1323275 + Oligosaccharyl transferase STT3 subunit PFAM: Oligosaccharyl transferase STT3 subunit~KEGG: ddf:DEFDS_0397 hypothetical protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1353 Theam_1354 Theam_1354 Theam_1354 1323259 1324632 - RNA-metabolising metallo-beta-lactamase PFAM: RNA-metabolising metallo-beta-lactamase~KEGG: sul:SYO3AOP1_0851 beta-lactamase domain protein gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1354 Theam_1355 Theam_1355 Theam_1355 1324629 1325057 - Thioredoxin domain-containing protein PFAM: Thioredoxin domain-containing protein~KEGG: hhe:HH0055 thioredoxin gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1355 Theam_1356 Theam_1356 Theam_1356 1325122 1327875 + leucyl-tRNA synthetase KEGG: dal:Dalk_1193 leucyl-tRNA synthetase~TIGRFAM: leucyl-tRNA synthetase gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1356 Theam_1357 Theam_1357 Theam_1357 1327878 1328402 + hypothetical protein KEGG: sat:SYN_02375 hypothetical protein gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1357 Theam_1358 Theam_1358 Theam_1358 1328371 1328685 + hypothetical protein KEGG: dma:DMR_46130 hypothetical membrane protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1358 Theam_1359 Theam_1359 Theam_1359 1328678 1329286 + selenium metabolism protein YedF KEGG: gsu:GSU2521 hypothetical protein~TIGRFAM: selenium metabolism protein YedF~PFAM: SirA-like domain-containing protein gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1359 Theam_1360 Theam_1360 Theam_1360 1329247 1330008 - hypothetical protein KEGG: nis:NIS_1089 hypothetical protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1360 Theam_1361 Theam_1361 Theam_1361 1330105 1330356 - hypothetical protein KEGG: dar:Daro_3342 hypothetical protein gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1361 Theam_1362 Theam_1362 Theam_1362 1330337 1331086 - hypothetical protein KEGG: ang:An08g07740 hypothetical protein gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1362 Theam_1363 Theam_1363 Theam_1363 1331079 1331876 - Tetratricopeptide TPR_1 repeat-containing protein KEGG: pmx:PERMA_0798 TPR domain containing protein~PFAM: Tetratricopeptide TPR_1 repeat-containing protein~SMART: Tetratricopeptide repeat gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1363 Theam_1364 Theam_1364 Theam_1364 1331878 1332438 - GTP cyclohydrolase I TIGRFAM: GTP cyclohydrolase I~KEGG: chy:CHY_0955 GTP cyclohydrolase I~PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1364 Theam_1365 Theam_1365 Theam_1365 1332440 1334335 - ATP-dependent metalloprotease FtsH SMART: AAA ATPase~TIGRFAM: ATP-dependent metalloprotease FtsH~KEGG: tye:THEYE_A0626 metalloprotease FtsH~PFAM: peptidase M41%3B AAA ATPase central domain protein gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1365 Theam_1366 Theam_1366 Theam_1366 1334322 1334849 - hypoxanthine phosphoribosyltransferase TIGRFAM: hypoxanthine phosphoribosyltransferase~KEGG: cpc:Cpar_1613 hypoxanthine phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1366 Theam_1367 Theam_1367 Theam_1367 1334809 1336140 - tRNA(Ile)-lysidine synthetase KEGG: chy:CHY_0213 tRNA(Ile)-lysidine synthetase~TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: PP-loop domain protein%3B Protein of unkown function DUF1946 PP-loop ATpase gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1367 Theam_1368 Theam_1368 Theam_1368 1336366 1337574 + argininosuccinate synthase TIGRFAM: argininosuccinate synthase~KEGG: sul:SYO3AOP1_1335 argininosuccinate synthase~PFAM: argininosuccinate synthase gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1368 Theam_1369 Theam_1369 Theam_1369 1337574 1338884 + trigger factor KEGG: aae:aq_1340 trigger factor~TIGRFAM: trigger factor~PFAM: trigger factor domain-containing protein%3B peptidylprolyl isomerase FKBP-type gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1369 Theam_1370 Theam_1370 Theam_1370 1338903 1340231 - two component%2C sigma54 specific%2C transcriptional regulator%2C Fis family KEGG: pmx:PERMA_1425 type 4 fimbriae expression regulatory protein PilR~PFAM: sigma-54 factor interaction domain-containing protein%3B response regulator receiver%3B helix-turn-helix Fis-type~SMART: response regulator receiver%3B AAA ATPase gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1370 Theam_1371 Theam_1371 Theam_1371 1340206 1341399 - integral membrane sensor signal transduction histidine kinase KEGG: pmx:PERMA_1424 histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1371 Theam_1372 Theam_1372 Theam_1372 1341386 1343617 - phosphoribosylformylglycinamidine synthase II TIGRFAM: phosphoribosylformylglycinamidine synthase II~KEGG: dap:Dacet_1986 phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1372 Theam_1373 Theam_1373 Theam_1373 1343725 1344174 + Domain of unknown function DUF1931 PFAM: Domain of unknown function DUF1931~KEGG: pmx:PERMA_1062 hypothetical protein gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1373 Theam_1374 Theam_1374 Theam_1374 1344216 1344422 + hypothetical protein KEGG: ddf:DEFDS_0803 hypothetical protein gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1374 Theam_1375 Theam_1375 Theam_1375 1344487 1345005 + Protein of unknown function DUF2148 PFAM: Protein of unknown function DUF2148~KEGG: pca:Pcar_1498 ferredoxin domain-containing protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1375 Theam_1376 Theam_1376 Theam_1376 1345005 1345964 + Mg2 transporter protein CorA family protein PFAM: Mg2 transporter protein CorA family protein~KEGG: mmh:Mmah_1504 magnesium and cobalt transport protein CorA gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1376 Theam_1377 Theam_1377 Theam_1377 1345984 1347975 + CoA-binding domain protein PFAM: CoA-binding domain protein%3B Phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain~KEGG: mhu:Mhun_1471 CoA-binding gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1377 Theam_1378 Theam_1378 Theam_1378 1347930 1349552 + pyruvate flavodoxin/ferredoxin oxidoreductase domain protein PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein%3B Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~KEGG: hya:HY04AAS1_0082 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1378 Theam_1379 Theam_1379 Theam_1379 1349549 1350352 + pyruvate ferredoxin/flavodoxin oxidoreductase%2C beta subunit KEGG: tpe:Tpen_1455 pyruvate ferredoxin/flavodoxin oxidoreductase%2C beta subunit~TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase%2C beta subunit~PFAM: thiamine pyrophosphate TPP-binding domain-containing protein gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1379 Theam_1380 Theam_1380 Theam_1380 1350386 1350625 + hypothetical protein KEGG: cel:K10D3.1 GLutamate Receptor family (AMPA) gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1380 Theam_1381 Theam_1381 Theam_1381 1350616 1351398 - hypothetical protein KEGG: nth:Nther_2553 hypothetical protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1381 Theam_1382 Theam_1382 Theam_1382 1351502 1351777 + hypothetical protein KEGG: bpr:GBP346_A1683 CaiB/BaiF family protein gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1382 Theam_1383 Theam_1383 Theam_1383 1351806 1352291 + DNA binding domain-containing protein KEGG: lic:LIC12660 DNA binding domain-containing protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1383 Theam_1384 Theam_1384 Theam_1384 1352275 1353213 - flagellar hook-associated protein 3 TIGRFAM: flagellar hook-associated protein 3~KEGG: pmx:PERMA_1615 flagellar hook-associated protein 3 gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1384 Theam_1385 Theam_1385 Theam_1385 1353217 1354566 - flagellar hook-associated protein FlgK KEGG: pmx:PERMA_1614 flagellar hook-associated protein FlgK~TIGRFAM: flagellar hook-associated protein FlgK~PFAM: protein of unknown function DUF1078 domain protein gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1385 Theam_1386 Theam_1386 Theam_1386 1354622 1354948 - hypothetical protein KEGG: saf:SULAZ_1093 hypothetical protein gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1386 Theam_1387 Theam_1387 Theam_1387 1354954 1355622 - type IV pilus assembly PilZ PFAM: type IV pilus assembly PilZ~KEGG: pmx:PERMA_0239 type IV pilus assembly protein PilZ gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1387 Theam_1388 Theam_1388 Theam_1388 1355851 1356636 - protein of unknown function DUF218 PFAM: protein of unknown function DUF218~KEGG: aae:aq_1986 hypothetical protein gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1388 Theam_1389 Theam_1389 Theam_1389 1356646 1357578 - biotin synthase SMART: Elongator protein 3/MiaB/NifB~TIGRFAM: biotin synthase~KEGG: pth:PTH_0521 biotin synthase and related enzymes~PFAM: biotin and thiamin synthesis associated%3B Radical SAM domain protein gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1389 Theam_1390 Theam_1390 Theam_1390 1357575 1358156 - MglA protein KEGG: ppd:Ppro_2940 MglA protein gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1390 Theam_1391 Theam_1391 Theam_1391 1358166 1358639 - Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: ddf:DEFDS_0025 mutual gliding protein B gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1391 Theam_1392 Theam_1392 Theam_1392 1358639 1359619 - thiamine pyrophosphate TPP-binding domain-containing protein PFAM: thiamine pyrophosphate TPP-binding domain-containing protein~KEGG: ppd:Ppro_0325 thiamine pyrophosphate binding domain-containing protein gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1392 Theam_1393 Theam_1393 Theam_1393 1359636 1360844 - pyruvate flavodoxin/ferredoxin oxidoreductase domain protein PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~KEGG: dtu:Dtur_0262 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1393 Theam_1394 Theam_1394 Theam_1394 1360847 1361143 - pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit~KEGG: kol:Kole_0380 pyruvate ferredoxin/flavodoxin oxidoreductase%2C delta subunit gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1394 Theam_1395 Theam_1395 Theam_1395 1361140 1361706 - pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit KEGG: tye:THEYE_A0907 pyruvate synthase subunit PorC~TIGRFAM: pyruvate/ketoisovalerate oxidoreductase%2C gamma subunit~PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1395 Theam_1396 Theam_1396 Theam_1396 1361706 1362311 - recombination protein RecR TIGRFAM: recombination protein RecR~PFAM: TOPRIM domain-containing protein%3B Zinc finger C4-type%2C RecR~KEGG: saf:SULAZ_1173 recombination protein RecR~SMART: Toprim sub domain-containing protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1396 Theam_1397 Theam_1397 Theam_1397 1362308 1362640 - Uncharacterized protein family UPF0133 PFAM: Uncharacterised protein family UPF0133~KEGG: tpd:Teth39_2199 hypothetical protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1397 Theam_1398 Theam_1398 Theam_1398 1362715 1363815 + GTP-binding proten HflX KEGG: pth:PTH_2120 GTPase~TIGRFAM: GTP-binding proten HflX%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1398 Theam_1399 Theam_1399 Theam_1399 1363790 1365034 - Tetratricopeptide TPR_1 repeat-containing protein KEGG: pmx:PERMA_1951 TPR domain containing protein~PFAM: Tetratricopeptide TPR_1 repeat-containing protein~SMART: Tetratricopeptide repeat gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1399 Theam_1400 Theam_1400 Theam_1400 1365123 1366433 + SurA domain protein PFAM: SurA domain~KEGG: gem:GM21_1709 hypothetical protein gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1400 Theam_1401 Theam_1401 Theam_1401 1366436 1367314 + YicC-like domain-containing protein PFAM: YicC-like domain-containing protein%3B domain of unknown function DUF1732~KEGG: amt:Amet_2792 hypothetical protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1401 Theam_1402 Theam_1402 Theam_1402 1367304 1367987 + guanylate kinase SMART: guanylate kinase/L-type calcium channel region~TIGRFAM: guanylate kinase~KEGG: pca:Pcar_1285 guanylate kinase~PFAM: guanylate kinase gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1402 Theam_1403 Theam_1403 Theam_1403 1368028 1368237 + DNA-directed RNA polymerase%2C omega subunit KEGG: pmx:PERMA_1423 DNA-directed RNA polymerase%2C omega subunit~TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~PFAM: RNA polymerase Rpb6 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1403 Theam_1404 Theam_1404 Theam_1404 1368240 1368986 + Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulfur cluster binding domain protein PFAM: Dihydroorotate dehydrogenase%2C electron transfer subunit%2C iron-sulphur cluster binding domain%3B oxidoreductase FAD/NAD(P)-binding domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: saf:SULAZ_0324 dihydroorotate dehydrogenase electron transfer subunit gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1404 Theam_1405 Theam_1405 Theam_1405 1369059 1370288 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine-rich region domain protein~KEGG: tal:Thal_0437 protein of unknown function DUF224 cysteine-rich region domain protein gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1405 Theam_1406 Theam_1406 Theam_1406 1370352 1370861 + hypothetical protein KEGG: dhd:Dhaf_1810 periplasmic binding protein gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1406 Theam_1407 Theam_1407 Theam_1407 1370884 1373007 + diguanylate cyclase and metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B histidine kinase HAMP region domain protein%3B GGDEF domain containing protein~KEGG: dak:DaAHT2_2075 metal dependent phosphohydrolase~SMART: metal-dependent phosphohydrolase HD region%3B histidine kinase HAMP region domain protein%3B GGDEF domain containing protein gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1407 Theam_1408 Theam_1408 Theam_1408 1373052 1374221 + succinyl-CoA synthetase%2C beta subunit TIGRFAM: succinyl-CoA synthetase%2C beta subunit~KEGG: saf:SULAZ_0638 succinyl-CoA synthetase subunit beta~PFAM: ATP-grasp domain protein%3B ATP-citrate lyase/succinyl-CoA ligase gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1408 Theam_1409 Theam_1409 Theam_1409 1374233 1375135 + succinyl-CoA synthetase%2C alpha subunit KEGG: aae:aq_1622 succinyl-CoA ligase alpha subunit~TIGRFAM: succinyl-CoA synthetase%2C alpha subunit~PFAM: ATP-citrate lyase/succinyl-CoA ligase%3B CoA-binding domain protein gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1409 Theam_1410 Theam_1410 Theam_1410 1375149 1375376 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: tai:Taci_0967 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1410 Theam_1411 Theam_1411 Theam_1411 1375388 1376539 + pyruvate flavodoxin/ferredoxin oxidoreductase domain protein PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein~KEGG: ddf:DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase subunit alpha gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1411 Theam_1412 Theam_1412 Theam_1412 1376539 1377396 + thiamine pyrophosphate TPP-binding domain-containing protein PFAM: thiamine pyrophosphate TPP-binding domain-containing protein~KEGG: geo:Geob_2667 2-oxoglutarate ferredoxin oxidoreductase subunit beta gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1412 Theam_1413 Theam_1413 Theam_1413 1377393 1378019 + Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain protein PFAM: Pyruvate/ketoisovalerate oxidoreductase%2C catalytic domain~KEGG: aco:Amico_0797 pyruvate/ketoisovalerate oxidoreductase gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1413 Theam_1414 Theam_1414 Theam_1414 1378046 1379512 - hypothetical protein KEGG: ddf:DEFDS_2082 hypothetical protein gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1414 Theam_1415 Theam_1415 Theam_1415 1379587 1380921 - hypothetical protein KEGG: gur:Gura_1207 hypothetical protein gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1415 Theam_1416 Theam_1416 Theam_1416 1381152 1383263 + hypothetical protein KEGG: nam:NAMH_0013 putative lipoprotein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1416 Theam_1417 Theam_1417 Theam_1417 1383265 1383840 + hypothetical protein KEGG: oaa:100077184 similar to hepatoma-derived growth factor 3 gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1417 Theam_1418 Theam_1418 Theam_1418 1383821 1385170 + adenosylmethionine-8-amino-7-oxononanoate aminotransferase KEGG: hth:HTH_0097 adenosylmethionine-8-amino-7-oxononanoate aminotransferase~TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase~PFAM: aminotransferase class-III gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1418 Theam_1419 Theam_1419 Theam_1419 1385179 1385667 - hypothetical protein KEGG: shc:Shell_0130 UspA domain protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1419 Theam_1420 Theam_1420 Theam_1420 1385667 1386137 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: mvu:Metvu_1674 UspA domain protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1420 Theam_1421 Theam_1421 Theam_1421 1386149 1387138 - protein of unknown function DUF814 PFAM: protein of unknown function DUF814%3B Thiamine biosynthesis protein-like~KEGG: dth:DICTH_1386 tRNA methyl transferase gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1421 Theam_1422 Theam_1422 Theam_1422 1387200 1387763 + sigma 54 modulation protein/ribosomal protein S30EA KEGG: tye:THEYE_A0234 SSU ribosomal protein S30P~TIGRFAM: ribosomal subunit interface protein~PFAM: sigma 54 modulation protein/ribosomal protein S30EA gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1422 Theam_1423 Theam_1423 Theam_1423 1387787 1388320 - protein of unknown function DUF820 PFAM: protein of unknown function DUF820~KEGG: pmx:PERMA_2014 hypothetical protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1423 Theam_1424 Theam_1424 Theam_1424 1388352 1390148 - GTP-binding protein LepA KEGG: tpd:Teth39_1397 GTP-binding protein LepA~TIGRFAM: GTP-binding protein LepA%3B small GTP-binding protein~PFAM: GTP-binding protein LepA domain protein%3B protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor G domain-containing protein gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1424 Theam_1425 Theam_1425 Theam_1425 1390334 1390576 - pseudogene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1425 Theam_1426 Theam_1426 Theam_1426 1390925 1393423 - hypothetical protein KEGG: lpf:lpl0072 hypothetical protein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1426 Theam_1427 Theam_1427 Theam_1427 1393869 1393970 - hypothetical protein gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1427 Theam_1428 Theam_1428 Theam_1428 1393971 1397807 - hypothetical protein KEGG: cag:Cagg_3322 hypothetical protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1428 Theam_1429 Theam_1429 Theam_1429 1397867 1401022 - helicase domain protein KEGG: sul:SYO3AOP1_0490 helicase domain protein~PFAM: helicase domain protein%3B type III restriction protein res subunit~SMART: helicase domain protein%3B DEAD-like helicase gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1429 Theam_1430 Theam_1430 Theam_1430 1401081 1401602 - Inorganic diphosphatase KEGG: saf:SULAZ_0579 inorganic pyrophosphatase~PFAM: Inorganic pyrophosphatase gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1430 Theam_1431 Theam_1431 Theam_1431 1401709 1401930 + FeoA family protein PFAM: FeoA family protein~KEGG: iho:Igni_1229 FeoA family protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1431 Theam_1432 Theam_1432 Theam_1432 1401927 1403942 + ferrous iron transport protein B KEGG: tit:Thit_1665 ferrous iron transport protein B~TIGRFAM: ferrous iron transport protein B%3B small GTP-binding protein~PFAM: Ferrous iron transport protein B domain-containing protein%3B GTP-binding protein HSR1-related%3B nucleoside recognition domain protein%3B Ferrous iron transport B domain-containing protein gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1432 Theam_1433 Theam_1433 Theam_1433 1403967 1405268 + DNA repair protein RadA KEGG: sul:SYO3AOP1_0247 DNA repair protein RadA~TIGRFAM: DNA repair protein RadA~SMART: AAA ATPase gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1433 Theam_1434 Theam_1434 Theam_1434 1405351 1406355 + putative lipoprotein KEGG: nam:NAMH_0013 putative lipoprotein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1434 Theam_1435 Theam_1435 Theam_1435 1406544 1407206 - PHP domain protein KEGG: dma:DMR_17210 hypothetical protein~PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1435 Theam_1436 Theam_1436 Theam_1436 1407236 1407901 + HhH-GPD family protein KEGG: endonuclease III%2C putative (nth2)~PFAM: HhH-GPD family protein~SMART: HhH-GPD family protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1436 Theam_1437 Theam_1437 Theam_1437 1407915 1408940 + type IV pilus assembly PilZ PFAM: type IV pilus assembly PilZ~KEGG: saf:SULAZ_0203 type IV pilus assembly protein PilZ gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1437 Theam_1438 Theam_1438 Theam_1438 1408937 1409344 + hypothetical protein KEGG: hmg:100205988 similar to epidermal growth factor receptor pathway substrate 15 gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1438 Theam_1439 Theam_1439 Theam_1439 1409298 1409816 + hypothetical protein KEGG: pmx:PERMA_1127 hypothetical protein gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1439 Theam_1440 Theam_1440 Theam_1440 1409743 1410786 - flagellar biosynthetic protein FlhB KEGG: saf:SULAZ_1357 flagellar biosynthetic protein FlhB~TIGRFAM: flagellar biosynthetic protein FlhB~PFAM: type III secretion exporter gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1440 Theam_1441 Theam_1441 Theam_1441 1410779 1411558 - flagellar biosynthetic protein FliR KEGG: nis:NIS_0634 flagellar biosynthetic protein FliR~TIGRFAM: flagellar biosynthetic protein FliR~PFAM: type III secretion system inner membrane R protein gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1441 Theam_1442 Theam_1442 Theam_1442 1411555 1411824 - flagellar biosynthetic protein FliQ KEGG: pmx:PERMA_0708 flagellar biosynthetic protein FliQ~TIGRFAM: flagellar biosynthetic protein FliQ~PFAM: export protein FliQ family 3 gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1442 Theam_1443 Theam_1443 Theam_1443 1411821 1412519 - flagellar biosynthetic protein FliP KEGG: pmx:PERMA_0709 flagellar biosynthetic protein FliP~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: type III secretion system inner membrane P protein gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1443 Theam_1444 Theam_1444 Theam_1444 1412771 1413022 - surface presentation of antigens (SPOA) protein PFAM: surface presentation of antigens (SPOA) protein~KEGG: nis:NIS_0630 flagellar motor switch protein FliN/FliY gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1444 Theam_1445 Theam_1445 Theam_1445 1413026 1413538 - flagellar basal body-associated protein FliL PFAM: flagellar basal body-associated protein FliL~KEGG: pmx:PERMA_0712 flagellar basal body-associated protein FliL gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1445 Theam_1446 Theam_1446 Theam_1446 1413550 1415118 - flagellar hook-basal body protein KEGG: nis:NIS_0628 flagellar basal body and hook protein FlgE~TIGRFAM: flagellar hook-basal body protein~PFAM: flagellar basal body FlaE domain protein%3B flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1446 Theam_1447 Theam_1447 Theam_1447 1415121 1415777 - flagellar hook capping protein PFAM: flagellar hook capping protein~KEGG: pmx:PERMA_0714 flagellar hook capping protein FlgD gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1447 Theam_1448 Theam_1448 Theam_1448 1415740 1417080 - ATPase%2C FliI/YscN family TIGRFAM: ATPase%2C FliI/YscN family~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~KEGG: pmx:PERMA_0715 flagellar protein export ATPase FliI~SMART: AAA ATPase gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1448 Theam_1449 Theam_1449 Theam_1449 1417040 1417681 - hypothetical protein KEGG: nis:NIS_0625 hypothetical protein gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1449 Theam_1450 Theam_1450 Theam_1450 1417678 1419276 - flagellar M-ring protein FliF KEGG: pmx:PERMA_0717 flagellar M-ring protein FliF~TIGRFAM: flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1450 Theam_1451 Theam_1451 Theam_1451 1419289 1419573 - flagellar hook-basal body complex subunit FliE KEGG: sul:SYO3AOP1_1643 flagellar hook-basal body complex subunit FliE~TIGRFAM: flagellar hook-basal body complex subunit FliE~PFAM: flagellar hook-basal body complex protein FliE gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1451 Theam_1452 Theam_1452 Theam_1452 1419585 1419992 - flagellar basal-body rod protein FlgC KEGG: nis:NIS_0622 flagellar basal-body rod protein FlgC~TIGRFAM: flagellar basal-body rod protein FlgC~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1452 Theam_1453 Theam_1453 Theam_1453 1419995 1420369 - flagellar basal-body rod protein FlgB TIGRFAM: flagellar basal-body rod protein FlgB~KEGG: nis:NIS_0621 flagellar basal-body rod protein FlgB gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1453 Theam_1454 Theam_1454 Theam_1454 1420335 1422287 - Tetratricopeptide TPR_1 repeat-containing protein PFAM: Tetratricopeptide TPR_1 repeat-containing protein~KEGG: pmx:PERMA_0721 tetratricopeptide repeat domain protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1454 Theam_1455 Theam_1455 Theam_1455 1422284 1424290 - hypothetical protein KEGG: bta:528842 neurofilament%2C heavy polypeptide gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1455 Theam_1456 Theam_1456 Theam_1456 1424323 1424934 - RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG subfamily KEGG: pmx:PERMA_0723 RNA polymerase sigma factor for flagellar operon~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1456 Theam_1457 Theam_1457 Theam_1457 1424935 1425792 - cobyrinic acid ac-diamide synthase KEGG: sul:SYO3AOP1_1649 cobyrinic acid ac-diamide synthase gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1457 Theam_1458 Theam_1458 Theam_1458 1425794 1426945 - GTP-binding signal recognition particle SRP54 G- domain protein PFAM: GTP-binding signal recognition particle SRP54 G- domain~KEGG: pmx:PERMA_0725 flagellar biosynthetic protein FlhF gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1458 Theam_1459 Theam_1459 Theam_1459 1426942 1429023 - flagellar biosynthesis protein FlhA KEGG: pmx:PERMA_0726 flagellar biosynthesis protein FlhA~TIGRFAM: flagellar biosynthesis protein FlhA~PFAM: type III secretion FHIPEP protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1459 Theam_1460 Theam_1460 Theam_1460 1429024 1429314 - hypothetical protein KEGG: pmx:PERMA_0727 hypothetical protein gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1460 Theam_1461 Theam_1461 Theam_1461 1429323 1430414 - flagellar P-ring protein PFAM: flagellar P-ring protein~KEGG: pmx:PERMA_0728 flagellar P-ring protein FlgI gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1461 Theam_1462 Theam_1462 Theam_1462 1430427 1431122 - flagellar L-ring protein PFAM: flagellar L-ring protein~KEGG: saf:SULAZ_1334 flagellar L-ring protein FlgH gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1462 Theam_1463 Theam_1463 Theam_1463 1431077 1432042 - flagella basal body P-ring formation protein FlgA KEGG: pmx:PERMA_0730 putative flagellar protein FlgA~TIGRFAM: flagella basal body P-ring formation protein FlgA~PFAM: SAF domain protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1463 Theam_1464 Theam_1464 Theam_1464 1432005 1432805 - flagellar basal-body rod protein FlgG KEGG: pmx:PERMA_0731 flagellar basal-body rod protein FlgG~TIGRFAM: flagellar basal-body rod protein FlgG%3B flagellar hook-basal body protein~PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body rod protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1464 Theam_1465 Theam_1465 Theam_1465 1432817 1433533 - flagellar hook-basal body protein KEGG: pmx:PERMA_0732 flagellar basal-body rod protein FlgF~TIGRFAM: flagellar hook-basal body protein~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1465 Theam_1466 Theam_1466 Theam_1466 1433537 1433878 - pseudogene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1466 Theam_1467 Theam_1467 Theam_1467 1433958 1435001 - flagellar motor switch protein FliM KEGG: pmx:PERMA_0734 flagellar motor switch protein FliM~TIGRFAM: flagellar motor switch protein FliM~PFAM: flagellar motor switch protein FliM%3B surface presentation of antigens (SPOA) protein gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1467 Theam_1468 Theam_1468 Theam_1468 1435021 1436055 - flagellar motor switch protein FliG KEGG: pmx:PERMA_0735 flagellar motor switch protein FliG~TIGRFAM: flagellar motor switch protein FliG~PFAM: flagellar motor switch protein FliG gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1468 Theam_1469 Theam_1469 Theam_1469 1436066 1436569 - Uncharacterized protein family UPF0114 PFAM: Uncharacterised protein family UPF0114~KEGG: nam:NAMH_0669 hypothetical protein gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1469 Theam_1470 Theam_1470 Theam_1470 1436570 1437943 - Citrate transporter PFAM: Citrate transporter~KEGG: ddr:Deide_15690 putative Na+/H+ antiporter NhaD and related arsenite permeases (arsenical pump membrane protein)(anion permease ArsB/NhaD) gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1470 Theam_1471 Theam_1471 Theam_1471 1437907 1439505 - SMC domain protein PFAM: SMC domain protein~KEGG: pmx:PERMA_0874 DNA repair protein RecN gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1471 Theam_1472 Theam_1472 Theam_1472 1439507 1440091 - ribosome biogenesis GTP-binding protein YsxC KEGG: tna:CTN_1027 ribosome biogenesis GTP-binding protein YsxC~TIGRFAM: ribosome biogenesis GTP-binding protein YsxC%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1472 Theam_1473 Theam_1473 Theam_1473 1440081 1440677 - Redoxin domain protein PFAM: Redoxin domain protein~KEGG: hmo:HM1_0367 cytochrome c assembly protein (thioredoxin)%2C putative gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1473 Theam_1474 Theam_1474 Theam_1474 1440677 1441603 - thioredoxin reductase KEGG: ddf:DEFDS_0503 thioredoxin reductase~TIGRFAM: thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1474 Theam_1475 Theam_1475 Theam_1475 1441606 1441932 - thioredoxin KEGG: saf:SULAZ_0121 thioredoxin~TIGRFAM: thioredoxin~PFAM: Thioredoxin domain-containing protein gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1475 Theam_1476 Theam_1476 Theam_1476 1441916 1442200 - transcriptional regulator%2C ArsR family KEGG: pmx:PERMA_0357 transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1476 Theam_1477 Theam_1477 Theam_1477 1442244 1443050 - protein of unknown function DUF52 PFAM: protein of unknown function DUF52~KEGG: afw:Anae109_1268 hypothetical protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1477 Theam_1478 Theam_1478 Theam_1478 1443142 1443510 + aspartate 1-decarboxylase TIGRFAM: aspartate 1-decarboxylase~KEGG: ddf:DEFDS_0845 aspartate 1-decarboxylase~PFAM: aspartate decarboxylase gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1478 Theam_1479 Theam_1479 Theam_1479 1443541 1444638 - Myo-inositol-1-phosphate synthase PFAM: Myo-inositol-1-phosphate synthase%3B Myo-inositol-1-phosphate synthase GAPDH domain protein~KEGG: aae:aq_1763 hypothetical protein gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1479 Theam_1480 Theam_1480 Theam_1480 1444639 1445040 - hypothetical protein KEGG: tva:TVAG_478880 hypothetical protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1480 Theam_1481 Theam_1481 Theam_1481 1445041 1445742 - tol-pal system protein YbgF KEGG: dol:Dole_2208 Tol-Pal system YbgF~TIGRFAM: tol-pal system protein YbgF~PFAM: Tetratricopeptide TPR_1 repeat-containing protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1481 Theam_1482 Theam_1482 Theam_1482 1445742 1446815 - 2-nitropropane dioxygenase NPD PFAM: 2-nitropropane dioxygenase NPD~KEGG: bse:Bsel_2926 2-nitropropane dioxygenase NPD gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1482 Theam_1483 Theam_1483 Theam_1483 1446812 1447303 - protein of unknown function DUF523 PFAM: protein of unknown function DUF523~KEGG: mta:Moth_0616 hypothetical protein gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1483 Theam_1484 Theam_1484 Theam_1484 1447300 1448499 - peptidase M16 domain protein PFAM: peptidase M16 domain protein~KEGG: sul:SYO3AOP1_0156 peptidase M16 domain protein gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1484 Theam_1485 Theam_1485 Theam_1485 1448499 1449146 - phosphoribosylglycinamide formyltransferase KEGG: pmx:PERMA_0010 phosphoribosylglycinamide formyltransferase~TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: formyl transferase domain protein gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1485 Theam_1486 Theam_1486 Theam_1486 1449143 1450177 - phosphoribosylformylglycinamidine cyclo-ligase TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase~KEGG: tpd:Teth39_1711 phosphoribosylaminoimidazole synthetase~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1486 Theam_1487 Theam_1487 Theam_1487 1450181 1451155 - metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: glo:Glov_0049 metal dependent phosphohydrolase~SMART: metal-dependent phosphohydrolase HD region gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1487 Theam_1488 Theam_1488 Theam_1488 1451224 1452639 - NADH/Ubiquinone/plastoquinone (complex I) PFAM: NADH/Ubiquinone/plastoquinone (complex I)~KEGG: hmo:HM1_2206 proton-translocating NADH-ubiquinone oxidoreductase%2C chain N gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1488 Theam_1489 Theam_1489 Theam_1489 1452650 1454101 - proton-translocating NADH-quinone oxidoreductase%2C chain M KEGG: sun:SUN_0852 NADH-quinone oxidoreductase%2C chain M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1489 Theam_1490 Theam_1490 Theam_1490 1454113 1455942 - proton-translocating NADH-quinone oxidoreductase%2C chain L KEGG: nam:NAMH_1416 NAD(P)H-quinone oxidoreductase chain 5 (NAD(P)Hdehydrogenase I%2C chain 5)~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1490 Theam_1491 Theam_1491 Theam_1491 1455944 1456252 - NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: hmu:Hmuk_1924 NADH-ubiquinone oxidoreductase chain 4L gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1491 Theam_1492 Theam_1492 Theam_1492 1456252 1456734 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~KEGG: sun:SUN_0849 NADH-quinone oxidoreductase%2C chain J gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1492 Theam_1493 Theam_1493 Theam_1493 1456731 1457309 - NADH dehydrogenase subunit I KEGG: nam:NAMH_1419 NADH dehydrogenase subunit I gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1493 Theam_1494 Theam_1494 Theam_1494 1457321 1458265 - NADH dehydrogenase (quinone) KEGG: nam:NAMH_1420 NADH-quinone oxidoreductase chain 8~PFAM: respiratory-chain NADH dehydrogenase subunit 1 gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1494 Theam_1495 Theam_1495 Theam_1495 1458275 1459444 - NADH dehydrogenase (quinone) KEGG: sun:SUN_0846 NADH-quinone oxidoreductase%2C chain D~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1495 Theam_1496 Theam_1496 Theam_1496 1459444 1459911 - NADH dehydrogenase (ubiquinone) 30 kDa subunit PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit~KEGG: sun:SUN_0846 NADH-quinone oxidoreductase%2C chain D gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1496 Theam_1497 Theam_1497 Theam_1497 1459924 1460394 - NADH-quinone oxidoreductase%2C B subunit TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~KEGG: nam:NAMH_1422 NADH-ubiquinone oxidoreductase 20 kda subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1497 Theam_1498 Theam_1498 Theam_1498 1460391 1460726 - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~KEGG: nam:NAMH_1423 putative proton-translocating NADH-quinone oxidoreductase%2C A subunit gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1498 Theam_1499 Theam_1499 Theam_1499 1460900 1461679 - phosphate ABC transporter%2C ATPase subunit TIGRFAM: phosphate ABC transporter%2C ATPase subunit~PFAM: ABC transporter related~KEGG: saf:SULAZ_1288 phosphate ABC transporter%2C ATP-binding protein~SMART: AAA ATPase gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1499 Theam_1500 Theam_1500 Theam_1500 1461690 1462532 - phosphate ABC transporter%2C inner membrane subunit PstA KEGG: tdn:Suden_1886 phosphate ABC transporter permease~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstA~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1500 Theam_1501 Theam_1501 Theam_1501 1462535 1463461 - phosphate ABC transporter%2C inner membrane subunit PstC KEGG: pmx:PERMA_1573 phosphate ABC transporter%2C permease protein PstC~TIGRFAM: phosphate ABC transporter%2C inner membrane subunit PstC~PFAM: binding-protein-dependent transport systems inner membrane component gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1501 Theam_1502 Theam_1502 Theam_1502 1463599 1467051 + DNA polymerase III%2C alpha subunit SMART: phosphoesterase PHP domain protein~TIGRFAM: DNA polymerase III%2C alpha subunit~KEGG: gme:Gmet_1215 DNA polymerase III subunit alpha~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1502 Theam_1503 Theam_1503 Theam_1503 1467062 1468006 + acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit KEGG: pmx:PERMA_0043 acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~TIGRFAM: acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit~PFAM: Acetyl-CoA carboxylase%2C alpha subunit%2C conserved region gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1503 Theam_1504 Theam_1504 Theam_1504 1467975 1469294 - metal dependent phosphohydrolase KEGG: tjr:TherJR_0746 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1504 Theam_1505 Theam_1505 Theam_1505 1469297 1470550 - DEAD/DEAH box helicase domain protein KEGG: hth:HTH_0805 ATP-dependent RNA helicase~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicase %3B helicase domain protein gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1505 Theam_1506 Theam_1506 Theam_1506 1470660 1470866 - cold-shock DNA-binding domain protein KEGG: saf:SULAZ_0432 hypothetical protein~PFAM: Cold-shock protein DNA-binding~SMART: Cold shock protein gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1506 Theam_1507 Theam_1507 Theam_1507 1471081 1471485 + ferredoxin KEGG: paa:Paes_0772 ferredoxin gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1507 Theam_1508 Theam_1508 Theam_1508 1471514 1471738 - hypothetical protein KEGG: bcl:ABC2005 spore germination protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1508 Theam_1509 Theam_1509 Theam_1509 1471793 1472848 + tRNA pseudouridine synthase D TruD PFAM: tRNA pseudouridine synthase D TruD~KEGG: mif:Metin_0213 tRNA pseudouridine synthase D TruD gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1509 Theam_1510 Theam_1510 Theam_1510 1472894 1474495 + D-3-phosphoglycerate dehydrogenase KEGG: sul:SYO3AOP1_0259 D-3-phosphoglycerate dehydrogenase~TIGRFAM: D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B amino acid-binding ACT domain protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1510 Theam_1511 Theam_1511 Theam_1511 1474500 1475462 - Holliday junction DNA helicase RuvB TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain~KEGG: tte:TTE1180 Holliday junction DNA helicase RuvB~SMART: AAA ATPase gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1511 Theam_1512 Theam_1512 Theam_1512 1475443 1476015 - Holliday junction DNA helicase RuvA KEGG: sti:Sthe_1680 Holliday junction DNA helicase RuvA~TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: RuvA domain protein%3B DNA recombination protein RuvA domain I gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1512 Theam_1513 Theam_1513 Theam_1513 1476015 1476737 - hypothetical protein KEGG: bpy:Bphyt_1180 prophage tail length tape measure gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1513 Theam_1514 Theam_1514 Theam_1514 1476734 1477288 - hypothetical protein KEGG: mxa:MXAN_2503 hypothetical protein gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1514 Theam_1515 Theam_1515 Theam_1515 1477278 1478516 - hypothetical protein KEGG: sse:Ssed_3789 hypothetical protein gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1515 Theam_1516 Theam_1516 Theam_1516 1478513 1479385 - hypothetical protein KEGG: glo:Glov_1274 general secretion pathway protein K gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1516 Theam_1517 Theam_1517 Theam_1517 1479366 1480424 - translation initiation factor%2C aIF-2BI family TIGRFAM: translation initiation factor%2C aIF-2BI family%3B eIF-2B alpha/beta/delta-related uncharacterized protein~KEGG: taf:THA_488 methylthioribose-1-phosphate isomerase~PFAM: initiation factor 2B related gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1517 Theam_1518 Theam_1518 Theam_1518 1480425 1480901 - UspA domain-containing protein PFAM: UspA domain-containing protein~KEGG: mvu:Metvu_1674 UspA domain protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1518 Theam_1519 Theam_1519 Theam_1519 1480935 1481720 - MazG family protein KEGG: aae:aq_342 hypothetical protein~TIGRFAM: MazG family protein~PFAM: MazG nucleotide pyrophosphohydrolase gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1519 Theam_1520 Theam_1520 Theam_1520 1481783 1483201 + cysteinyl-tRNA synthetase KEGG: saf:SULAZ_0684 cysteinyl-tRNA synthetase~TIGRFAM: cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia %3B Cysteinyl-tRNA synthetase class Ia DALR gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1520 Theam_1521 Theam_1521 Theam_1521 1483201 1483353 + hypothetical protein KEGG: bge:BC1002_2783 amino acid permease-associated region gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1521 Theam_1522 Theam_1522 Theam_1522 1483330 1483986 - ABC transporter related protein KEGG: rsq:Rsph17025_3433 hypothetical protein~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1522 Theam_1523 Theam_1523 Theam_1523 1483974 1484666 - cobalt transport protein PFAM: cobalt transport protein~KEGG: tye:THEYE_A1922 cobalt ABC transporter%2C permease protein CbiQ gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1523 Theam_1524 Theam_1524 Theam_1524 1484641 1485240 - hypothetical protein KEGG: tye:THEYE_A1921 hypothetical protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1524 Theam_1525 Theam_1525 Theam_1525 1485237 1485839 - cobalamin (vitamin B12) biosynthesis CbiM protein PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein~KEGG: tye:THEYE_A1920 CbiM gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1525 Theam_1526 Theam_1526 Theam_1526 1485839 1486624 - Nickel transport complex%2C NikM subunit%2C transmembrane PFAM: Nickel transport complex%2C NikM subunit%2C transmembrane~KEGG: ddf:DEFDS_0032 cobalt ABC transporter substrate-binding protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1526 Theam_1527 Theam_1527 Theam_1527 1486750 1488042 + Carbohydrate-selective porin OprB PFAM: Carbohydrate-selective porin OprB~KEGG: sfu:Sfum_2751 carbohydrate-selective porin OprB gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1527 Theam_1528 Theam_1528 Theam_1528 1488066 1489331 - pseudogene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1528 Theam_1529 Theam_1529 Theam_1529 1489361 1490215 - Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: tye:THEYE_A0358 radical SAM domain protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1529 Theam_1530 Theam_1530 Theam_1530 1490225 1491106 - tRNA pseudouridine synthase D TruD PFAM: tRNA pseudouridine synthase D TruD~KEGG: pmx:PERMA_1706 tRNA pseudouridine synthase D gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1530 Theam_1531 Theam_1531 Theam_1531 1491096 1492301 - FolC bifunctional protein TIGRFAM: FolC bifunctional protein~KEGG: saf:SULAZ_1058 bifunctional protein FolC~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1531 Theam_1532 Theam_1532 Theam_1532 1492359 1493177 + hypothetical protein KEGG: tet:TTHERM_00006030 hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1532 Theam_1533 Theam_1533 Theam_1533 1493174 1493440 + CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2~KEGG: cyt:cce_0347 hypothetical protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1533 Theam_1534 Theam_1534 Theam_1534 1493404 1493733 + CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2~KEGG: psl:Psta_1138 CRISPR-associated protein Cas2 gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1534 Theam_1535 Theam_1535 Theam_1535 1494417 1495049 - CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2~KEGG: cyt:cce_0347 hypothetical protein gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1535 Theam_1536 Theam_1536 Theam_1536 1495050 1495946 - CRISPR-associated protein Cas1 KEGG: mba:Mbar_A3119 CRISPR-associated Cas1/Cas4 family protein~TIGRFAM: CRISPR-associated protein Cas1~PFAM: protein of unknown function DUF48 gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1536 Theam_1537 Theam_1537 Theam_1537 1496261 1496977 - hypothetical protein KEGG: ami:Amir_4835 hypothetical protein gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1537 Theam_1538 Theam_1538 Theam_1538 1497063 1497524 + phosphatidylglycerophosphatase A PFAM: phosphatidylglycerophosphatase A~KEGG: sul:SYO3AOP1_0645 phosphatidylglycerophosphatase A gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1538 Theam_1539 Theam_1539 Theam_1539 1497517 1498935 + acetyl-CoA carboxylase%2C biotin carboxylase KEGG: aae:aq_1470 biotin carboxylase~TIGRFAM: acetyl-CoA carboxylase%2C biotin carboxylase~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B biotin carboxylase domain protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1539 Theam_1540 Theam_1540 Theam_1540 1498947 1500803 + oxaloacetate decarboxylase alpha subunit KEGG: pmx:PERMA_0625 pyruvate carboxylase subunit B~TIGRFAM: oxaloacetate decarboxylase alpha subunit~PFAM: Conserved carboxylase region%3B pyruvate carboxyltransferase%3B biotin/lipoyl attachment domain-containing protein gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1540 Theam_1541 Theam_1541 Theam_1541 1500958 1501311 + hypothetical protein KEGG: api:100160276 similar to glucosyl/glucuronosyl transferases gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1541 Theam_1542 Theam_1542 Theam_1542 1501311 1502810 + Mg chelatase%2C subunit ChlI TIGRFAM: Mg chelatase%2C subunit ChlI~PFAM: magnesium chelatase ChlI subunit~KEGG: gsu:GSU0489 Mg chelatase-related protein~SMART: AAA ATPase gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1542 Theam_1543 Theam_1543 Theam_1543 1502821 1503291 + hypothetical protein KEGG: sdl:Sdel_0959 hypothetical protein gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1543 Theam_1544 Theam_1544 Theam_1544 1503280 1504428 - chorismate synthase TIGRFAM: chorismate synthase~KEGG: pmx:PERMA_0190 chorismate synthase~PFAM: chorismate synthase gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1544 Theam_1545 Theam_1545 Theam_1545 1504665 1505039 + ribosomal protein L19 KEGG: slp:Slip_0912 ribosomal protein L19~TIGRFAM: ribosomal protein L19~PFAM: ribosomal protein L19 gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1545 Theam_1546 Theam_1546 Theam_1546 1505021 1505749 + Ribonuclease H KEGG: pmx:PERMA_0363 ribonuclease HII~PFAM: ribonuclease HII/HIII gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1546 Theam_1547 Theam_1547 Theam_1547 1505727 1505972 + pseudogene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1547 Theam_1548 Theam_1548 Theam_1548 1506042 1508681 + translation initiation factor IF-2 KEGG: chy:CHY_1766 translation initiation factor IF-2~TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B translation initiation factor IF-2 domain-containing protein%3B elongation factor Tu domain 2 protein gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1548 Theam_1549 Theam_1549 Theam_1549 1508681 1508950 + hypothetical protein KEGG: cin:100175620 similar to phosphatidylinositol 3-kinase%2C C2 domain containing%2C alpha polypeptide gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1549 Theam_1550 Theam_1550 Theam_1550 1508961 1509890 + 1-phosphofructokinase KEGG: tmt:Tmath_2160 1-phosphofructokinase~TIGRFAM: 1-phosphofructokinase~PFAM: PfkB domain protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1550 Theam_1551 Theam_1551 Theam_1551 1509909 1510946 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: pmx:PERMA_1267 response regulator receiver modulated diguanylate cyclase~SMART: GGDEF domain containing protein gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1551 Theam_1552 Theam_1552 Theam_1552 1510958 1512016 - ribonucleotide reductase PFAM: ribonucleotide reductase~KEGG: fnu:FN0103 ribonucleoside-diphosphate reductase beta chain gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1552 Theam_1553 Theam_1553 Theam_1553 1512030 1513097 - hypothetical protein KEGG: pbe:PB000629.02.0 hypothetical protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1553 Theam_1554 Theam_1554 Theam_1554 1513314 1515608 - ribonucleoside-diphosphate reductase%2C alpha subunit KEGG: cyt:cce_1354 ribonucleoside-diphosphate reductase alpha subunit~TIGRFAM: ribonucleoside-diphosphate reductase%2C alpha subunit~PFAM: ribonucleotide reductase large subunit%3B Ribonucleotide reductase large subunit domain protein%3B ATP-cone domain protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1554 Theam_1555 Theam_1555 Theam_1555 1515851 1516357 - Redoxin domain protein PFAM: Redoxin domain protein~KEGG: saf:SULAZ_1089 thiol peroxidase (scavengase P20) gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1555 Theam_1556 Theam_1556 Theam_1556 1516450 1517238 - hypothetical protein KEGG: drm:Dred_1883 hypothetical protein gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1556 Theam_1557 Theam_1557 Theam_1557 1517238 1517510 - hypothetical protein KEGG: pfs:PFLU1703 hypothetical protein gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1557 Theam_1558 Theam_1558 Theam_1558 1517601 1517723 + hypothetical protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1558 Theam_1559 Theam_1559 Theam_1559 1517942 1518709 + beta-lactamase domain protein KEGG: mif:Metin_0045 beta-lactamase domain protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1559 Theam_1560 Theam_1560 Theam_1560 1518682 1519434 + methyl-accepting chemotaxis sensory transducer KEGG: mif:Metin_0046 methyl-accepting chemotaxis sensory transducer~PFAM: chemotaxis sensory transducer~SMART: chemotaxis sensory transducer gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1560 Theam_1561 Theam_1561 Theam_1561 1519779 1521941 + 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase KEGG: aae:aq_1710 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase~PFAM: Methionine synthase vitamin-B12 independent%3B Cobalamin-independent synthase MetE domain protein gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1561 Theam_1562 Theam_1562 Theam_1562 1522041 1522700 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: cth:Cthe_0647 anaerobic ribonucleoside-triphosphate reductase activating protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1562 Theam_1563 Theam_1563 Theam_1563 1522697 1524767 + pseudogene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1563 Theam_1564 Theam_1564 Theam_1564 1524839 1525906 + ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: pmx:PERMA_1371 hypothetical protein gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1564 Theam_1565 Theam_1565 Theam_1565 1525876 1526964 + Tat pathway signal sequence domain protein KEGG: pmx:PERMA_1373 Tat pathway signal sequence domain protein gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1565 Theam_1566 Theam_1566 Theam_1566 1526988 1527548 - thioesterase superfamily protein PFAM: thioesterase superfamily protein~KEGG: dhd:Dhaf_2748 thioesterase superfamily protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1566 Theam_1567 Theam_1567 Theam_1567 1527548 1530769 - carbamoyl-phosphate synthase%2C large subunit KEGG: fpl:Ferp_0317 carbamoyl-phosphate synthase%2C large subunit~TIGRFAM: carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP-binding%3B Carbamoyl-phosphate synthetase large chain domain protein%3B Carbamoyl-phosphate synthetase large chain oligomerisation%3B MGS domain protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1567 Theam_1568 Theam_1568 Theam_1568 1530840 1531358 + Adenylate kinase KEGG: mif:Metin_0909 adenylate kinase~PFAM: Dephospho-CoA kinase gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1568 Theam_1569 Theam_1569 Theam_1569 1531321 1532658 + sun protein KEGG: gsu:GSU3373 Sun protein~TIGRFAM: sun protein~PFAM: Fmu (Sun) domain protein%3B NusB/RsmB/TIM44 gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1569 Theam_1570 Theam_1570 Theam_1570 1532660 1533301 + putative signal transduction protein PFAM: Metal-dependent hydrolase HDOD~KEGG: aae:aq_478 hypothetical protein gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1570 Theam_1571 Theam_1571 Theam_1571 1533333 1533983 + putative signal transduction protein PFAM: Metal-dependent hydrolase HDOD~KEGG: aae:aq_478 hypothetical protein gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1571 Theam_1572 Theam_1572 Theam_1572 1533973 1535139 - tRNA pseudouridine synthase D TruD PFAM: tRNA pseudouridine synthase D TruD~KEGG: pmx:PERMA_0571 tRNA pseudouridine synthase D gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1572 Theam_1573 Theam_1573 Theam_1573 1535105 1535632 - histidinol-phosphate phosphatase family protein TIGRFAM: histidinol-phosphate phosphatase family protein%3B hydrolase%2C HAD-superfamily%2C subfamily IIIA~KEGG: msl:Msil_0986 histidinol-phosphate phosphatase family protein gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1573 Theam_1574 Theam_1574 Theam_1574 1535700 1535918 + hypothetical protein KEGG: cbe:Cbei_0350 methyl-accepting chemotaxis sensory transducer gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1574 Theam_1575 Theam_1575 Theam_1575 1535944 1536762 - Peptidase M23 PFAM: Peptidase M23~KEGG: pmx:PERMA_0759 peptidase%2C M23/M37 family gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1575 Theam_1576 Theam_1576 Theam_1576 1536815 1537558 - Carbonate dehydratase KEGG: pmx:PERMA_1443 carbonic anhydrase (carbonate dehydratase)~PFAM: carbonic anhydrase gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1576 Theam_1577 Theam_1577 Theam_1577 1537653 1539299 + adenine deaminase TIGRFAM: adenine deaminase~KEGG: cpi:Cpin_1198 adenine deaminase~PFAM: amidohydrolase gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1577 Theam_1578 Theam_1578 Theam_1578 1540284 1544756 - DNA-directed RNA polymerase%2C beta' subunit TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1 domain 1%3B RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 4%3B RNA polymerase Rpb1 domain 5%3B glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich~KEGG: pmx:PERMA_1190 DNA-directed RNA polymerase%2C beta' subunit~SMART: RNA polymerase I subunit A domain protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1578 Theam_1579 Theam_1579 Theam_1579 1544813 1549162 - DNA-directed RNA polymerase%2C beta subunit KEGG: pmx:PERMA_1189 DNA-directed RNA polymerase subunit beta~TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase Rpb2 domain 3%3B RNA polymerase beta subunit%3B RNA polymerase Rpb2 domain 2%3B DNA-directed RNA polymerase%2C beta subunit%2C external 1 domain%3B RNA polymerase Rpb2 domain 7 gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1579 Theam_1580 Theam_1580 Theam_1580 1549278 1549664 - ribosomal protein L7/L12 KEGG: saf:SULAZ_1764 50S ribosomal protein L7/L12~TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12 gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1580 Theam_1581 Theam_1581 Theam_1581 1549701 1550240 - ribosomal protein L10 PFAM: ribosomal protein L10~KEGG: nth:Nther_0183 ribosomal protein L10 gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1581 Theam_1582 Theam_1582 Theam_1582 1550419 1551141 - ribosomal protein L1 KEGG: pmx:PERMA_1186 50S ribosomal protein L1~TIGRFAM: ribosomal protein L1~PFAM: ribosomal protein L1 gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1582 Theam_1583 Theam_1583 Theam_1583 1551198 1551623 - ribosomal protein L11 TIGRFAM: ribosomal protein L11~PFAM: Ribosomal protein L11-like~KEGG: tna:CTN_0219 50S ribosomal protein L11~SMART: ribosomal protein L11 gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1583 Theam_1584 Theam_1584 Theam_1584 1551640 1552380 - NusG antitermination factor TIGRFAM: transcription termination/antitermination factor NusG~PFAM: NGN domain-containing protein%3B KOW domain protein~KEGG: pmx:PERMA_1184 transcription termination/antitermination factor NusG~SMART: NGN domain-containing protein%3B KOW domain protein gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1584 Theam_1585 Theam_1585 Theam_1585 1552400 1552582 - preprotein translocase%2C SecE subunit KEGG: aae:aq_1930b preprotein translocase subunit SecE~TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: protein secE/sec61-gamma protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1585 Theam_1586 Theam_1586 Theam_1586 1552751 1552915 - ribosomal protein L33 KEGG: tal:Thal_0632 ribosomal protein L33~TIGRFAM: ribosomal protein L33~PFAM: ribosomal protein L33 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1586 Theam_1587 Theam_1587 Theam_1587 1552965 1554161 - translation elongation factor Tu KEGG: slp:Slip_2239 translation elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B elongation factor Tu domain-containing protein gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1587 Theam_1588 Theam_1588 Theam_1588 1554617 1556044 + hypothetical protein KEGG: cpi:Cpin_2382 hypothetical protein gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1588 Theam_1589 Theam_1589 Theam_1589 1556139 1556318 + pseudogene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1589 Theam_1590 Theam_1590 Theam_1590 1556315 1556887 + 16S rRNA processing protein RimM KEGG: ljf:FI9785_752 16S rRNA-processing protein RimM~TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM protein%3B PRC-barrel domain protein gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1590 Theam_1591 Theam_1591 Theam_1591 1556884 1557642 + tRNA (guanine-N1)-methyltransferase TIGRFAM: tRNA (guanine-N1)-methyltransferase~KEGG: sul:SYO3AOP1_0118 tRNA (guanine-N(1)-)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1591 Theam_1592 Theam_1592 Theam_1592 1557629 1557880 + hypothetical protein KEGG: amu:Amuc_1974 pyruvate phosphate dikinase gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1592 Theam_1593 Theam_1593 Theam_1593 1557886 1558077 - regulatory protein%2C FmdB family KEGG: tnp:Tnap_1587 regulatory protein%2C FmdB family~TIGRFAM: regulatory protein%2C FmdB family~PFAM: Putative regulatory protein FmdB gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1593 Theam_1594 Theam_1594 Theam_1594 1558133 1558687 + hypothetical protein KEGG: pmx:PERMA_0115 bacterioferritin (BFR) (cytochrome b-557.5) gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1594 Theam_1595 Theam_1595 Theam_1595 1558848 1560347 + metal dependent phosphohydrolase TIGRFAM: metal dependent phophohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~KEGG: gbm:Gbem_3173 metal dependent phosphohydrolase~SMART: metal-dependent phosphohydrolase HD region gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1595 Theam_1596 Theam_1596 Theam_1596 1560241 1561317 + chorismate mutase manually curated~TIGRFAM: chorismate mutase~KEGG: aae:aq_951 chorismate mutase/prephenate dehydratase~PFAM: prephenate dehydratase%3B Chorismate mutase%2C type II%3B amino acid-binding ACT domain protein gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1596 Theam_1597 Theam_1597 Theam_1597 1561314 1561760 + hypothetical protein KEGG: ant:Arnit_2671 hypothetical protein gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1597 Theam_1598 Theam_1598 Theam_1598 1561784 1562368 + Imidazoleglycerol-phosphate dehydratase KEGG: gur:Gura_4056 imidazoleglycerol-phosphate dehydratase~PFAM: imidazoleglycerol-phosphate dehydratase gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1598 Theam_1599 Theam_1599 Theam_1599 1562365 1562658 + DNA polymerase beta domain protein region protein PFAM: DNA polymerase beta domain protein region~KEGG: hth:HTH_0017 nucleotidyltransferase gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1599 Theam_1600 Theam_1600 Theam_1600 1562698 1563999 + glutamate-1-semialdehyde-2%2C1-aminomutase KEGG: tjr:TherJR_1142 glutamate-1-semialdehyde-2%2C1-aminomutase~TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: aminotransferase class-III gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1600 Theam_1601 Theam_1601 Theam_1601 1564011 1564589 + hypothetical protein KEGG: sul:SYO3AOP1_0542 SNARE associated Golgi protein gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1601 Theam_1602 Theam_1602 Theam_1602 1564564 1565139 + hypothetical protein KEGG: pol:Bpro_3150 hypothetical protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1602 Theam_1603 Theam_1603 Theam_1603 1565126 1565335 + hypothetical protein KEGG: sul:SYO3AOP1_1583 ATP synthase protein I gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1603 Theam_1604 Theam_1604 Theam_1604 1565332 1565718 + hypothetical protein KEGG: mga:MGA_1037 hypothetical protein gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1604 Theam_1605 Theam_1605 Theam_1605 1565700 1566398 + ATP synthase F0%2C A subunit KEGG: sun:SUN_1582 F0F1 ATP synthase subunit A~TIGRFAM: ATP synthase F0%2C A subunit~PFAM: H+transporting two-sector ATPase A subunit gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1605 Theam_1606 Theam_1606 Theam_1606 1566425 1566766 + ATP synthase F0%2C C subunit KEGG: pmx:PERMA_0193 ATP synthase C chain (lipid-binding protein)~TIGRFAM: ATP synthase F0%2C C subunit~PFAM: H+transporting two-sector ATPase C subunit gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1606 Theam_1607 Theam_1607 Theam_1607 1566830 1567333 - ATPase with chaperone activity%2C ATP-binding subunit KEGG: saf:SULAZ_0042 ATPase with chaperone activity%2C ATP-binding subunit gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1607 Theam_1608 Theam_1608 Theam_1608 1567388 1568236 - protein of unknown function DUF752 PFAM: protein of unknown function DUF752~KEGG: ava:Ava_1778 hypothetical protein gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1608 Theam_1609 Theam_1609 Theam_1609 1568233 1568703 - protein of unknown function DUF151 PFAM: protein of unknown function DUF151~KEGG: tal:Thal_1249 protein of unknown function DUF151 gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1609 Theam_1610 Theam_1610 Theam_1610 1568700 1570028 - RNA modification enzyme%2C MiaB family TIGRFAM: RNA modification enzyme%2C MiaB family%3B tRNA-i(6)A37 thiotransferase enzyme MiaB~PFAM: protein of unknown function UPF0004 %3B Radical SAM domain protein%3B deoxyribonuclease/rho motif-related TRAM~KEGG: tal:Thal_1248 RNA modification enzyme%2C MiaB family~SMART: Elongator protein 3/MiaB/NifB gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1610 Theam_1611 Theam_1611 Theam_1611 1570067 1570822 - OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: dba:Dbac_0163 OmpA/MotB domain protein gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1611 Theam_1612 Theam_1612 Theam_1612 1570885 1572135 + gamma-glutamyl phosphate reductase KEGG: pmx:PERMA_1682 gamma-glutamyl phosphate reductase~TIGRFAM: gamma-glutamyl phosphate reductase~PFAM: Aldehyde Dehydrogenase gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1612 Theam_1613 Theam_1613 Theam_1613 1572138 1572257 + hypothetical protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1613 Theam_1614 Theam_1614 Theam_1614 1572326 1573138 + CRISPR-associated protein Cas6 KEGG: pmx:PERMA_1765 crispr-associated protein Cas6~TIGRFAM: CRISPR-associated protein Cas6~PFAM: protein of unknown function DUF57 gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1614 Theam_1615 Theam_1615 Theam_1615 1573159 1573620 + hypothetical protein KEGG: fpl:Ferp_0612 cysteinyl-tRNA synthetase gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1615 Theam_1616 Theam_1616 Theam_1616 1573620 1575263 + CRISPR-associated CXXC_CXXC protein Cst1 TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1~KEGG: sul:SYO3AOP1_0668 CRISPR-associated CXXC_CXXC protein Cst1 gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1616 Theam_1617 Theam_1617 Theam_1617 1575253 1576269 + CRISPR-associated autoregulator%2C DevR family TIGRFAM: CRISPR-associated regulatory protein%2C DevR family%3B CRISPR-associated autoregulator DevR family~KEGG: pmx:PERMA_1335 crispr-associated regulatory protein%2C DevR family gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1617 Theam_1618 Theam_1618 Theam_1618 1576271 1577008 + CRISPR-associated protein Cas5 family TIGRFAM: CRISPR-associated protein Cas5 family%3B CRISPR-associated protein Cas5~KEGG: saf:SULAZ_0826 crispr-associated protein Cas5%2C tneap subtype gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1618 Theam_1619 Theam_1619 Theam_1619 1576995 1579238 + CRISPR-associated helicase Cas3 TIGRFAM: CRISPR-associated helicase Cas3%3B CRISPR-associated HD domain protein~PFAM: helicase domain protein~KEGG: pmx:PERMA_1338 crispr-associated helicase Cas3~SMART: helicase domain protein gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1619 Theam_1620 Theam_1620 Theam_1620 1579207 1579731 + CRISPR-associated protein Cas4 TIGRFAM: CRISPR-associated protein Cas4~KEGG: pmx:PERMA_1340 crispr-associated protein Cas4 gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1620 Theam_1621 Theam_1621 Theam_1621 1579736 1580701 + pseudogene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1621 Theam_1622 Theam_1622 Theam_1622 1580708 1580962 + CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2~KEGG: afu:AF2434 hypothetical protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1622 Theam_1623 Theam_1623 Theam_1623 1581042 1581860 + CRISPR-associated protein Cas6 KEGG: pmx:PERMA_1333 crispr-associated protein Cas6~TIGRFAM: CRISPR-associated protein Cas6~PFAM: protein of unknown function DUF57 gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1623 Theam_1624 Theam_1624 Theam_1624 1581978 1582205 + hypothetical protein KEGG: csc:Csac_0513 ABC-2 type transporter gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1624 Theam_1625 Theam_1625 Theam_1625 1582202 1582978 - ABC transporter related protein KEGG: ton:TON_1874 ABC transporter related ATPase component~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1625 Theam_1626 Theam_1626 Theam_1626 1582978 1583877 - hypothetical protein KEGG: nam:NAMH_0053 thiol:disulfide interchange protein gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1626 Theam_1627 Theam_1627 Theam_1627 1583951 1586638 - pyruvate%2C phosphate dikinase TIGRFAM: pyruvate%2C phosphate dikinase~KEGG: ddf:DEFDS_0235 pyruvate phosphate dikinase~PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding%3B PEP-utilising protein mobile region%3B PEP-utilizing protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1627 Theam_1628 Theam_1628 Theam_1628 1586653 1588722 - glycyl-tRNA synthetase%2C beta subunit TIGRFAM: glycyl-tRNA synthetase%2C beta subunit~KEGG: glo:Glov_1022 glycyl-tRNA synthetase subunit beta~PFAM: glycyl-tRNA synthetase beta subunit gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1628 Theam_1629 Theam_1629 Theam_1629 1588697 1589569 - glycyl-tRNA synthetase%2C alpha subunit TIGRFAM: glycyl-tRNA synthetase%2C alpha subunit~KEGG: gem:GM21_0655 glycyl-tRNA synthetase subunit alpha~PFAM: glycyl-tRNA synthetase alpha subunit gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1629 Theam_1630 Theam_1630 Theam_1630 1589770 1590198 + Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: aae:aq_1847 hypothetical protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1630 Theam_1631 Theam_1631 Theam_1631 1590223 1590453 + hypothetical protein KEGG: ptm:GSPATT00004867001 hypothetical protein gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1631 Theam_1632 Theam_1632 Theam_1632 1590518 1591225 + exsB protein KEGG: abi:Aboo_0657 ExsB protein~TIGRFAM: exsB protein~PFAM: Queuosine synthesis-like gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1632 Theam_1633 Theam_1633 Theam_1633 1591218 1592282 + selenide%2C water dikinase Contains selenocysteine~manually curated~TIGRFAM: selenide%2C water dikinase~KEGG: adg:Adeg_0304 selenide%2C water dikinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1633 Theam_1634 Theam_1634 Theam_1634 1592284 1593579 + MiaB-like tRNA modifying enzyme YliG TIGRFAM: MiaB-like tRNA modifying enzyme YliG%3B RNA modification enzyme%2C MiaB family~PFAM: protein of unknown function UPF0004 %3B Radical SAM domain protein~KEGG: pmx:PERMA_0494 hypothetical protein~SMART: Elongator protein 3/MiaB/NifB gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1634 Theam_1635 Theam_1635 Theam_1635 1593709 1594923 + protein of unknown function DUF39 PFAM: protein of unknown function DUF39~KEGG: dtu:Dtur_0732 protein of unknown function DUF39 gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1635 Theam_1636 Theam_1636 Theam_1636 1595002 1595985 + hypothetical protein KEGG: cno:NT01CX_1300 DNA modification methylase%2C putative gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1636 Theam_1637 Theam_1637 Theam_1637 1595988 1596512 + hypothetical protein KEGG: ptm:GSPATT00018704001 hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1637 Theam_1638 Theam_1638 Theam_1638 1596954 1597799 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase KEGG: pmx:PERMA_1286 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase~TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase~PFAM: GHMP kinase gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1638 Theam_1639 Theam_1639 Theam_1639 1597828 1598859 + polysaccharide deacetylase PFAM: polysaccharide deacetylase~KEGG: saf:SULAZ_1151 polysaccharide deacetylase gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1639 Theam_1640 Theam_1640 Theam_1640 1598856 1599623 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: pmx:PERMA_0780 lipopolysaccharide core biosynthesis glycosyltransferase WaaE gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1640 Theam_1641 Theam_1641 Theam_1641 1599592 1600680 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: dsa:Desal_2618 glycosyl transferase group 1 gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1641 Theam_1642 Theam_1642 Theam_1642 1600619 1600969 + hypothetical protein KEGG: xtr:548863 dual specificity phosphatase 4 gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1642 Theam_1643 Theam_1643 Theam_1643 1600972 1601076 + hypothetical protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1643 Theam_1644 Theam_1644 Theam_1644 1601076 1603385 + primosomal protein N' TIGRFAM: primosomal protein N'~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~KEGG: sat:SYN_01336 primosomal protein N'~SMART: DEAD-like helicase %3B helicase domain protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1644 Theam_1645 Theam_1645 Theam_1645 1603396 1603854 + hypothetical protein KEGG: saf:SULAZ_0332 putative lipoprotein gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1645 Theam_1646 Theam_1646 Theam_1646 1610978 1611820 - TonB family protein KEGG: sul:SYO3AOP1_1368 TonB family protein~TIGRFAM: TonB family protein~PFAM: TonB domain gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1646 Theam_1647 Theam_1647 Theam_1647 1611838 1613301 - glutamyl-tRNA(Gln) amidotransferase%2C A subunit KEGG: sul:SYO3AOP1_0487 aspartyl/glutamyl-tRNA amidotransferase subunit A~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C A subunit~PFAM: Amidase%3B CO dehydrogenase flavoprotein domain protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1647 Theam_1648 Theam_1648 Theam_1648 1613311 1613601 - glutamyl-tRNA(Gln) amidotransferase%2C C subunit KEGG: nth:Nther_0463 glutamyl-tRNA(Gln) amidotransferase%2C C subunit~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C C subunit~PFAM: Glu-tRNAGln amidotransferase C subunit gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1648 Theam_1649 Theam_1649 Theam_1649 1613598 1613918 - hypothetical protein KEGG: pfl:PFL_2386 hypothetical protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1649 Theam_1650 Theam_1650 Theam_1650 1613939 1614145 + thiamine biosynthesis sulfur transfer protein KEGG: aae:aq_025a thiamine biosynthesis sulfur transfer protein gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1650 Theam_1651 Theam_1651 Theam_1651 1614160 1614564 + Holliday junction resolvase YqgF KEGG: dsa:Desal_1125 Holliday junction resolvase YqgF~PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1651 Theam_1652 Theam_1652 Theam_1652 1614764 1615276 - hypothetical protein KEGG: bpo:BP951000_2245 DNA-directed RNA polymerase omega subunit family protein-like protein gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1652 Theam_1653 Theam_1653 Theam_1653 1615329 1615706 - hypothetical protein KEGG: lth:KLTH0H03542g KLTH0H03542p gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1653 Theam_1654 Theam_1654 Theam_1654 1615722 1616240 - hypothetical protein KEGG: pic:PICST_81023 hypothetical protein gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1654 Theam_1655 Theam_1655 Theam_1655 1616330 1617403 + tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase~KEGG: cdl:CDR20291_1121 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1655 Theam_1656 Theam_1656 Theam_1656 1617403 1617840 + H+transporting two-sector ATPase B/B' subunit PFAM: H+transporting two-sector ATPase B/B' subunit~KEGG: saf:SULAZ_0455 ATP synthase F0%2C B subunit gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1656 Theam_1657 Theam_1657 Theam_1657 1617851 1618324 + ATP synthase F0%2C B subunit KEGG: pmx:PERMA_0180 putative ATP synthase F0 subunit B~TIGRFAM: ATP synthase F0%2C B subunit~PFAM: H+transporting two-sector ATPase B/B' subunit gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1657 Theam_1658 Theam_1658 Theam_1658 1618336 1618869 + ATP synthase F1%2C delta subunit KEGG: dol:Dole_0600 F0F1 ATP synthase subunit delta~TIGRFAM: ATP synthase F1%2C delta subunit~PFAM: H+transporting two-sector ATPase delta (OSCP) subunit gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1658 Theam_1659 Theam_1659 Theam_1659 1618898 1620406 + ATP synthase F1%2C alpha subunit KEGG: aae:aq_679 F0F1 ATP synthase subunit alpha~TIGRFAM: ATP synthase F1%2C alpha subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1659 Theam_1660 Theam_1660 Theam_1660 1620421 1621281 + ATP synthase F1%2C gamma subunit KEGG: gsu:GSU0112 F0F1 ATP synthase subunit gamma~TIGRFAM: ATP synthase F1%2C gamma subunit~PFAM: H+transporting two-sector ATPase gamma subunit gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1660 Theam_1661 Theam_1661 Theam_1661 1621296 1622741 + ATP synthase F1%2C beta subunit TIGRFAM: ATP synthase F1%2C beta subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~KEGG: csc:Csac_1970 F0F1 ATP synthase subunit beta~SMART: AAA ATPase gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1661 Theam_1662 Theam_1662 Theam_1662 1622754 1623176 + ATP synthase F1%2C epsilon subunit KEGG: ami:Amir_6135 F0F1 ATP synthase subunit epsilon~TIGRFAM: ATP synthase F1%2C epsilon subunit~PFAM: ATPase%2C F1 complex%2C delta/epsilon subunit-like gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1662 Theam_1663 Theam_1663 Theam_1663 1623173 1623505 - hypothetical protein KEGG: snc:HMPREF0837_11752 aminodeoxychorismate lyase gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1663 Theam_1664 Theam_1664 Theam_1664 1623557 1624882 + amino acid permease-associated region protein PFAM: amino acid permease-associated region~KEGG: amino acid transporter gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1664 Theam_1665 Theam_1665 Theam_1665 1625001 1625729 + TonB family protein TIGRFAM: TonB family protein~KEGG: gvi:gll3406 hypothetical protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1665 Theam_1666 Theam_1666 Theam_1666 1625716 1626342 + protein of unknown function DUF374 PFAM: protein of unknown function DUF374~KEGG: nis:NIS_1482 hypothetical protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1666 Theam_1667 Theam_1667 Theam_1667 1626330 1627097 + protein of unknown function DUF62 PFAM: protein of unknown function DUF62~KEGG: aba:Acid345_3529 hypothetical protein gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1667 Theam_1668 Theam_1668 Theam_1668 1627106 1629013 + glucose inhibited division protein A KEGG: afl:Aflv_2858 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA~TIGRFAM: glucose inhibited division protein A~PFAM: glucose-inhibited division protein A gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1668 Theam_1669 Theam_1669 Theam_1669 1629000 1629626 + methyltransferase GidB KEGG: pmx:PERMA_1607 16S rRNA methyltransferase GidB~TIGRFAM: methyltransferase GidB~PFAM: glucose inhibited division protein gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1669 Theam_1670 Theam_1670 Theam_1670 1629630 1631039 + TM1410 hypothetical-related protein PFAM: TM1410 hypothetical-related protein~KEGG: reh:H16_A3363 endo alpha-1%2C4 polygalactosaminidase precusor gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1670 Theam_1671 Theam_1671 Theam_1671 1631123 1631395 + helix-turn-helix domain protein KEGG: aae:aq_1018 hypothetical protein~PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1671 Theam_1672 Theam_1672 Theam_1672 1631435 1632328 + homoserine kinase KEGG: hth:HTH_1473 homoserine kinase~TIGRFAM: homoserine kinase~PFAM: GHMP kinase%3B GHMP kinase domain protein gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1672 Theam_1673 Theam_1673 Theam_1673 1632325 1632840 - hypothetical protein KEGG: aae:aq_aa32 hypothetical protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1673 Theam_1674 Theam_1674 Theam_1674 1632852 1633205 - hypothetical protein KEGG: spl:Spea_3603 UDP-N-acetylglucosamine 1-carboxyvinyltransferase gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1674 Theam_1675 Theam_1675 Theam_1675 1633190 1633573 - AIG2 family protein PFAM: AIG2 family protein~KEGG: mfs:MFS40622_0524 AIG2 family protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1675 Theam_1676 Theam_1676 Theam_1676 1633694 1636333 - valyl-tRNA synthetase KEGG: gme:Gmet_0956 valyl-tRNA synthetase~TIGRFAM: valyl-tRNA synthetase gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1676 Theam_1677 Theam_1677 Theam_1677 1636511 1636957 + CMP/dCMP deaminase zinc-binding protein PFAM: CMP/dCMP deaminase zinc-binding~KEGG: tye:THEYE_A1388 cytosine deaminase gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1677 Theam_1678 Theam_1678 Theam_1678 1637080 1638135 + recA protein TIGRFAM: recA protein~PFAM: RecA domain protein~KEGG: gdj:Gdia_0513 RecA protein~SMART: AAA ATPase gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1678 Theam_1679 Theam_1679 Theam_1679 1638101 1639198 + twitching motility protein TIGRFAM: twitching motility protein~PFAM: type II secretion system protein E~KEGG: ddf:DEFDS_0037 twitching motility protein PilT~SMART: AAA ATPase gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1679 Theam_1680 Theam_1680 Theam_1680 1639179 1639634 + regulatory protein RecX PFAM: regulatory protein RecX~KEGG: tth:TTC0496 recombination regulator RecX gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1680 Theam_1681 Theam_1681 Theam_1681 1639659 1640996 - Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: abo:ABO_1992 hypothetical protein gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1681 Theam_1682 Theam_1682 Theam_1682 1641216 1643852 + alanyl-tRNA synthetase KEGG: aae:aq_1293 alanyl-tRNA synthetase~TIGRFAM: alanyl-tRNA synthetase~PFAM: Alanyl-tRNA synthetase%2C class IIc-like%3B Threonyl/alanyl tRNA synthetase SAD%3B phosphoesterase DHHA1 gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1682 Theam_1683 Theam_1683 Theam_1683 1644007 1644435 + hypothetical protein KEGG: kfl:Kfla_6150 virulence factor Mce family protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1683 Theam_1684 Theam_1684 Theam_1684 1644454 1648584 + hypothetical protein KEGG: ypz:YPZ3_2443 putative autotransporter protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1684 Theam_1685 Theam_1685 Theam_1685 1648668 1649954 + hypothetical protein KEGG: ant:Arnit_0610 PpiC-type peptidyl-prolyl cis-trans isomerase gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1685 Theam_1686 Theam_1686 Theam_1686 1649951 1650922 - PfkB domain protein PFAM: PfkB domain protein~KEGG: mif:Metin_0950 PfkB domain protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1686 Theam_1687 Theam_1687 Theam_1687 1650965 1651495 - protein of unknown function DUF448 PFAM: protein of unknown function DUF448~KEGG: gem:GM21_2982 protein of unknown function DUF448 gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1687 Theam_1688 Theam_1688 Theam_1688 1651492 1652634 - NusA antitermination factor KEGG: pmx:PERMA_0236 transcription termination factor NusA~TIGRFAM: transcription termination factor NusA~PFAM: NusA domain-containing protein%3B RNA binding S1 domain protein gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1688 Theam_1689 Theam_1689 Theam_1689 1652653 1653141 - protein of unknown function DUF150 PFAM: protein of unknown function DUF150~KEGG: dth:DICTH_1080 YlxS gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1689 Theam_1690 Theam_1690 Theam_1690 1653301 1653762 - SsrA-binding protein KEGG: tnp:Tnap_0884 SsrA-binding protein~TIGRFAM: SsrA-binding protein~PFAM: SmpB protein gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1690 Theam_1691 Theam_1691 Theam_1691 1653735 1654754 - RNA binding S1 domain protein PFAM: RNA binding S1 domain protein~KEGG: cwo:Cwoe_2872 RNA binding S1 domain protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1691 Theam_1692 Theam_1692 Theam_1692 1654714 1655601 - hydroxymethylbutenyl pyrophosphate reductase TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~KEGG: pmx:PERMA_0082 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~PFAM: LytB protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1692 Theam_1693 Theam_1693 Theam_1693 1655582 1656238 - 1-acyl-sn-glycerol-3-phosphate acyltransferase TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase~PFAM: phospholipid/glycerol acyltransferase~KEGG: hth:HTH_1298 1-acyl-sn-glycerol-3-phosphate acyltransferase~SMART: phospholipid/glycerol acyltransferase gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1693 Theam_1694 Theam_1694 Theam_1694 1656274 1657239 - hypothetical protein KEGG: sul:SYO3AOP1_0045 hypothetical protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1694 Theam_1695 Theam_1695 Theam_1695 1657292 1658572 - ammonium transporter KEGG: sul:SYO3AOP1_0046 ammonium transporter~TIGRFAM: ammonium transporter~PFAM: ammonium transporter gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1695 Theam_1696 Theam_1696 Theam_1696 1658724 1659611 + S-adenosyl-methyltransferase MraW KEGG: aae:aq_1875 S-adenosyl-methyltransferase MraW~TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: methyltransferase gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1696 Theam_1697 Theam_1697 Theam_1697 1659608 1660537 - ornithine carbamoyltransferase TIGRFAM: ornithine carbamoyltransferase~KEGG: afl:Aflv_2146 ornithine carbamoyltransferase~PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1697 Theam_1698 Theam_1698 Theam_1698 1660534 1660776 - hypothetical protein KEGG: tva:TVAG_102730 hypothetical protein gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1698 Theam_1699 Theam_1699 Theam_1699 1660758 1661237 - hypothetical protein KEGG: kra:Krad_3025 secretory protein gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1699 Theam_1700 Theam_1700 Theam_1700 1661234 1662115 - hypothetical protein KEGG: shc:Shell_0193 hypothetical protein gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1700 Theam_1701 Theam_1701 Theam_1701 1662196 1663695 + hypothetical protein KEGG: tye:THEYE_A1458 TPR domain protein%2C putative gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1701 Theam_1702 Theam_1702 Theam_1702 1663679 1664809 + oxygen-independent coproporphyrinogen III oxidase TIGRFAM: oxygen-independent coproporphyrinogen III oxidase~PFAM: Radical SAM domain protein%3B HemN domain protein~KEGG: tal:Thal_0482 oxygen-independent coproporphyrinogen III oxidase~SMART: Elongator protein 3/MiaB/NifB gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1702 Theam_1703 Theam_1703 Theam_1703 1664793 1665101 - hypothetical protein KEGG: mev:Metev_2348 ISA1083-3 transposase gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1703 Theam_1704 Theam_1704 Theam_1704 1665247 1665669 + protein of unknown function DUF1232 PFAM: protein of unknown function DUF1232~KEGG: gfo:GFO_3402 hypothetical protein gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1704 Theam_1705 Theam_1705 Theam_1705 1665626 1665817 + DNA topoisomerase type IA zn finger domain protein PFAM: DNA topoisomerase type IA zn finger domain protein~KEGG: ere:EUBREC_3433 DNA topoisomerase I gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1705 Theam_1706 Theam_1706 Theam_1706 1665814 1666524 - hypothetical protein KEGG: cbe:Cbei_4331 membrane bound O-acyl transferase%2C MBOAT family protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1706 Theam_1707 Theam_1707 Theam_1707 1666511 1667233 - hypothetical protein KEGG: nvi:100115883 similar to dynein heavy chain gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1707 Theam_1708 Theam_1708 Theam_1708 1667244 1667744 - hypothetical protein KEGG: rec:RHECIAT_CH0001094 chromosome partition protein gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1708 Theam_1709 Theam_1709 Theam_1709 1667755 1667997 - hypothetical protein KEGG: lbz:LbrM05_V2.0210 hypothetical protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1709 Theam_1710 Theam_1710 Theam_1710 1668080 1669174 - hypothetical protein KEGG: san:gbs1975 hypothetical protein gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1710 Theam_1711 Theam_1711 Theam_1711 1669253 1669501 + putative nicotinamide mononucleotide transporter KEGG: pfs:PFLU2807 putative nicotinamide mononucleotide transporter gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1711 Theam_1712 Theam_1712 Theam_1712 1669494 1670249 + stationary-phase survival protein SurE KEGG: aae:aq_832 stationary phase survival protein SurE~TIGRFAM: stationary-phase survival protein SurE~PFAM: Survival protein SurE gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1712 Theam_1713 Theam_1713 Theam_1713 1670239 1670829 + SNARE associated Golgi protein-like protein PFAM: SNARE associated Golgi protein~KEGG: afl:Aflv_2761 membrane protein DegA family gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1713 Theam_1714 Theam_1714 Theam_1714 1670826 1671380 + 4Fe-4S ferredoxin iron-sulfur binding domain protein KEGG: dhd:Dhaf_1287 4Fe-4S ferredoxin iron-sulfur binding domain protein gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1714 Theam_1715 Theam_1715 Theam_1715 1671361 1672314 + DNA polymerase III delta PFAM: DNA polymerase III delta~KEGG: aae:aq_1104 hypothetical protein gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1715 Theam_1716 Theam_1716 Theam_1716 1672343 1673623 + membrane-associated zinc metalloprotease TIGRFAM: membrane-associated zinc metalloprotease~PFAM: peptidase M50%3B PDZ/DHR/GLGF domain protein~KEGG: pmx:PERMA_0140 RIP metalloprotease RseP~SMART: PDZ/DHR/GLGF domain protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1716 Theam_1717 Theam_1717 Theam_1717 1673620 1674411 + hemolysin A TIGRFAM: hemolysin A~PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ%3B RNA-binding S4 domain protein~KEGG: saf:SULAZ_0516 hemolysin A~SMART: RNA-binding S4 domain protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1717 Theam_1718 Theam_1718 Theam_1718 1674624 1674998 + Roadblock/LC7 family protein PFAM: Roadblock/LC7 family protein~KEGG: sun:SUN_1399 hypothetical protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1718 Theam_1719 Theam_1719 Theam_1719 1675069 1675263 + hypothetical protein KEGG: sun:SUN_1398 hypothetical protein gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1719 Theam_1720 Theam_1720 Theam_1720 1675267 1675695 + hypothetical protein KEGG: dau:Daud_0646 signal recognition particle-docking protein FtsY gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1720 Theam_1721 Theam_1721 Theam_1721 1676277 1677002 - N-glycosylase/DNA lyase KEGG: tga:TGAM_1653 N-glycosylase/DNA lyase~manually curated~PFAM: N-glycosylase/DNA lyase gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1721 Theam_1722 Theam_1722 Theam_1722 1676986 1677486 - Protein of unknown function DUF2062 KEGG: dde:Dde_2062 hypothetical protein~manually curated~PFAM: Protein of unknown function DUF2062 gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1722 Theam_1723 Theam_1723 Theam_1723 1677611 1677799 + ribosomal protein L28 KEGG: dae:Dtox_1163 50S ribosomal protein L28~TIGRFAM: ribosomal protein L28~PFAM: ribosomal protein L28 gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1723 Theam_1724 Theam_1724 Theam_1724 1677821 1678435 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen~KEGG: cli:Clim_0030 redoxin domain protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1724 Theam_1725 Theam_1725 Theam_1725 1678420 1679199 - Indole-3-glycerol-phosphate synthase KEGG: saf:SULAZ_0951 indole-3-glycerol-phosphate synthase~PFAM: Indole-3-glycerol phosphate synthase gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1725 Theam_1726 Theam_1726 Theam_1726 1679174 1680589 - UDP-N-acetylglucosamine pyrophosphorylase KEGG: msv:Mesil_1266 UDP-N-acetylglucosamine pyrophosphorylase~TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase~PFAM: Nucleotidyl transferase%3B transferase hexapeptide repeat containing protein gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1726 Theam_1727 Theam_1727 Theam_1727 1680579 1681049 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: saf:SULAZ_0818 adp-ribose pyrophosphatase (adp-ribose diphosphatase)(adenosine diphosphoribose pyrophosphatase) (adpr-PPase) (adp-ribosephosphohydrolase) gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1727 Theam_1728 Theam_1728 Theam_1728 1681049 1681897 - hypothetical protein KEGG: tye:THEYE_A1039 hypothetical protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1728 Theam_1729 Theam_1729 Theam_1729 1681875 1682906 - S-adenosylmethionine/tRNA-ribosyltransferase-isomerase KEGG: adg:Adeg_1584 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase~TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase~PFAM: Queuosine biosynthesis protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1729 Theam_1730 Theam_1730 Theam_1730 322 642 + hypothetical protein KEGG: xtr:548744 family with sequence similarity 3%2C member B gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1730 Theam_1731 Theam_1731 Theam_1731 629 940 - hypothetical protein KEGG: tps:THAPSDRAFT_19262 hypothetical protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1731 Theam_1732 Theam_1732 Theam_1732 937 2457 - hypothetical protein KEGG: mal:MAGa7130 hypothetical protein gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1732 Theam_1733 Theam_1733 Theam_1733 2578 3102 - hypothetical protein KEGG: vei:Veis_3707 hypothetical protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1733 Theam_1734 Theam_1734 Theam_1734 3041 5620 - hypothetical protein KEGG: pmr:PMI2461 plasmid pilus assembly protein gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1734 Theam_1735 Theam_1735 Theam_1735 5707 6807 + hypothetical protein KEGG: pfh:PFHG_02497 hypothetical protein gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1735 Theam_1736 Theam_1736 Theam_1736 6826 7695 + RNA polymerase sigma factor%2C sigma-70 family KEGG: bll:BLJ_1357 LuxR family two component transcriptional regulator~TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: RNA-binding S4 domain protein gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1736 Theam_1737 Theam_1737 Theam_1737 7676 8008 + hypothetical protein KEGG: lbz:LbrM04_V2.1140 cytochrome c oxidase assembly factor gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1737 Theam_1738 Theam_1738 Theam_1738 8005 8508 - hypothetical protein KEGG: maq:Maqu_0302 glutamate dehydrogenase gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1738 Theam_1739 Theam_1739 Theam_1739 8626 9213 + hypothetical protein KEGG: saf:SULAZ_1762 DNA-directed RNA polymerase%2C beta' subunit gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1739 Theam_1740 Theam_1740 Theam_1740 9200 9733 + hypothetical protein KEGG: hje:HacjB3_01060 proline dehydrogenase gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1740 Theam_1741 Theam_1741 Theam_1741 9730 10062 - hypothetical protein KEGG: cci:CC1G_05821 hypothetical protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1741 Theam_1742 Theam_1742 Theam_1742 10055 10984 - hypothetical protein KEGG: sat:SYN_01836 MreB-like ATPase involved in cell division gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1742 Theam_1743 Theam_1743 Theam_1743 11231 11638 - hypothetical protein KEGG: mcc:714557 centrosomal protein 152kDa gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1743 Theam_1744 Theam_1744 Theam_1744 11701 12300 + hypothetical protein KEGG: ame:413728 Sirt7 histone deacetylase gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1744 Theam_1745 Theam_1745 Theam_1745 12297 12998 + diguanylate cyclase TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~KEGG: ppu:PP_1411 GGDEF domain-containing protein~SMART: GGDEF domain containing protein gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1745 Theam_1746 Theam_1746 Theam_1746 12995 13573 + EAL domain protein KEGG: ttu:TERTU_0131 PAS sensor diguanylate cyclase/phophodiesterase~PFAM: EAL domain protein~SMART: EAL domain protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1746 Theam_1747 Theam_1747 Theam_1747 13545 15011 + hypothetical protein KEGG: cjd:JJD26997_0837 DNA transfer in the process of conjugation and F pilus assembly protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1747 Theam_1748 Theam_1748 Theam_1748 15020 16966 + DNA topoisomerase I SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain-containing protein~TIGRFAM: DNA topoisomerase I~KEGG: pmx:PERMA_1975 DNA topoisomerase I~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain-containing protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1748 Theam_1749 Theam_1749 Theam_1749 17010 17261 + hypothetical protein gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1749 Theam_1750 Theam_1750 Theam_1750 17258 18349 - hypothetical protein KEGG: cfa:483207 trichohyalin gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1750 Theam_1751 Theam_1751 Theam_1751 18417 18710 + hypothetical protein KEGG: cch:Cag_0364 signal transduction protein gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1751 Theam_1752 Theam_1752 Theam_1752 18719 19102 + hypothetical protein KEGG: sli:Slin_6627 gliding motility-associated ABC transporter permease protein GldF gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1752 Theam_1753 Theam_1753 Theam_1753 19112 19738 + hypothetical protein KEGG: mab:MAB_4652 putative RNA polymerase sigma factor gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1753 Theam_1754 Theam_1754 Theam_1754 19728 20240 + hypothetical protein KEGG: reh:H16_A1657 hypothetical protein gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1754 Theam_1755 Theam_1755 Theam_1755 20243 21244 + hypothetical protein KEGG: eca:ECA0577 hypothetical protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1755 Theam_1756 Theam_1756 Theam_1756 21710 21820 - hypothetical protein gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1756 Theam_1757 Theam_1757 Theam_1757 21801 22724 - hypothetical protein KEGG: cpf:CPF_0915 putative polysaccharide polymerase protein gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1757 Theam_1758 Theam_1758 Theam_1758 22697 22987 - hypothetical protein KEGG: tcr:511649.110 hypothetical protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1758 Theam_1759 Theam_1759 Theam_1759 22984 23319 - hypothetical protein KEGG: bal:BACI_pCIXO201030 DNA topoisomerase III gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1759 Theam_1760 Theam_1760 Theam_1760 23389 24093 + hypothetical protein KEGG: mpt:Mpe_A2654 hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1760 Theam_1761 Theam_1761 Theam_1761 24050 25258 + hypothetical protein KEGG: mpt:Mpe_A0950 propane monoxygenase hydroxylase large subunit gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1761 Theam_1762 Theam_1762 Theam_1762 25259 26236 - membrane-associated zinc metalloprotease TIGRFAM: membrane-associated zinc metalloprotease~PFAM: peptidase M50%3B PDZ/DHR/GLGF domain protein~KEGG: sun:SUN_0756 membrane-associated zinc metalloprotease~SMART: PDZ/DHR/GLGF domain protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1762 Theam_1763 Theam_1763 Theam_1763 26334 27173 - integrase family protein PFAM: integrase family protein~KEGG: sul:SYO3AOP1_1189 integrase family protein gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1763 Theam_1764 Theam_1764 Theam_1764 27188 27508 - hypothetical protein KEGG: ccu:Ccur_11360 benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit%2C BcrC/BadD/HgdB gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1764 Theam_1765 Theam_1765 Theam_1765 27501 27878 - hypothetical protein KEGG: lcr:LCRIS_00882 triacylglycerol lipase gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1765 Theam_1766 Theam_1766 Theam_1766 27881 28150 - hypothetical protein KEGG: sco:SCO7531 integral membrane protein gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1766 Theam_1767 Theam_1767 Theam_1767 28159 28848 - Gp37Gp68 family protein PFAM: Gp37Gp68 family protein~KEGG: ppw:PputW619_3369 Gp37Gp68 family protein gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1767 Theam_1768 Theam_1768 Theam_1768 28832 29596 - hypothetical protein KEGG: pvx:PVX_091255 hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1768 Theam_1769 Theam_1769 Theam_1769 29593 30009 - hypothetical protein KEGG: xau:Xaut_4749 aminopeptidase N gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1769 Theam_1770 Theam_1770 Theam_1770 30037 30516 - hypothetical protein KEGG: cpy:Cphy_2933 diguanylate cyclase/phosphodiesterase gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1770 Theam_1771 Theam_1771 Theam_1771 30799 31623 + ATPase associated with various cellular activities AAA_5 PFAM: ATPase associated with various cellular activities AAA_5~KEGG: rpt:Rpal_0812 AAA ATPase gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1771 Theam_1772 Theam_1772 Theam_1772 31620 33245 + hypothetical protein KEGG: ptm:GSPATT00037947001 hypothetical protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1772 Theam_1773 Theam_1773 Theam_1773 33255 33608 + hypothetical protein KEGG: bfo:BRAFLDRAFT_83844 hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1773 Theam_1774 Theam_1774 Theam_1774 33674 34222 + trichohyalin KEGG: edi:EDI_156940 trichohyalin gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1774 Theam_1775 Theam_1775 Theam_1775 34219 34416 + periplasmic binding protein KEGG: fpl:Ferp_0223 periplasmic binding protein gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1775 Theam_1776 Theam_1776 Theam_1776 34413 35198 + hypothetical protein KEGG: tga:TGAM_1706 ABC-type thiamine transport system%2C periplasmic component (SfuA) gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1776 Theam_1777 Theam_1777 Theam_1777 35225 36658 - hypothetical protein KEGG: sub:SUB0702 membrane protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1777 Theam_1778 Theam_1778 Theam_1778 36801 37130 - hypothetical protein KEGG: tet:TTHERM_00997670 inorganic pyrophosphatase family protein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1778 Theam_1779 Theam_1779 Theam_1779 37151 37642 - hypothetical protein KEGG: slp:Slip_2003 nucleotide-binding protein%2C PIN domain protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1779 Theam_1780 Theam_1780 Theam_1780 37691 38005 - hypothetical protein KEGG: mhu:Mhun_0781 glutamate synthase (NADPH) gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1780 Theam_1781 Theam_1781 Theam_1781 38148 39671 - hypothetical protein KEGG: rpt:Rpal_3770 polysaccharide biosynthesis protein gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1781 Theam_1782 Theam_1782 Theam_1782 39674 40852 - metal-dependent phosphohydrolase HD sub domain protein KEGG: tai:Taci_0317 metal dependent phosphohydrolase~PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1782 Theam_1783 Theam_1783 Theam_1783 40840 41145 - hypothetical protein KEGG: dhd:Dhaf_2612 hypothetical protein gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1783 Theam_1784 Theam_1784 Theam_1784 41142 41807 - hypothetical protein KEGG: pab:PAB1382 putative flagella-related protein D or E gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1784 Theam_1785 Theam_1785 Theam_1785 41804 42259 - hypothetical protein KEGG: pmx:PERMA_A0038 type IV conjugative transfer system protein TraV gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1785 Theam_1786 Theam_1786 Theam_1786 42256 43503 - hypothetical protein KEGG: ngk:NGK_1081 TraB gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1786 Theam_1787 Theam_1787 Theam_1787 43491 44321 - hypothetical protein KEGG: nar:Saro_2158 hypothetical protein gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1787 Theam_1788 Theam_1788 Theam_1788 44318 44632 - hypothetical protein KEGG: aag:AaeL_AAEL007429 thyroid receptor interacting protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1788 Theam_1789 Theam_1789 Theam_1789 44711 45142 + hypothetical protein KEGG: der:Dere_GG12860 GG12860 gene product from transcript GG12860-RA gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1789 Theam_1790 Theam_1790 Theam_1790 45139 46851 + hypothetical protein KEGG: tye:THEYE_A0212 type II protein secretion protein-like protein gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1790 Theam_1791 Theam_1791 Theam_1791 46860 48215 + hypothetical protein KEGG: hth:HTH_1242 hypothetical protein gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1791 Theam_1792 Theam_1792 Theam_1792 48205 49023 + hypothetical protein KEGG: isc:IscW_ISCW004039 Menin%2C putative gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1792 Theam_1793 Theam_1793 Theam_1793 49033 49602 + hypothetical protein KEGG: bln:Blon_2078 G5 domain protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1793 Theam_1794 Theam_1794 Theam_1794 49677 50045 + hypothetical protein KEGG: dau:Daud_2006 hypothetical protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1794 Theam_1795 Theam_1795 Theam_1795 50038 52155 + peptidase C11 clostripain PFAM: peptidase C11 clostripain~KEGG: bgl:bglu_2g13260 hypothetical protein gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1795 Theam_1796 Theam_1796 Theam_1796 52225 52467 + hypothetical protein KEGG: dka:DKAM_0562 predicted DNA methylase containing a Zn-ribbon module gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1796 Theam_1797 Theam_1797 Theam_1797 52741 53958 - hypothetical protein KEGG: lla:L96658 hypothetical protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1797 Theam_1798 Theam_1798 Theam_1798 54007 54252 - AAA family ATPase KEGG: rrs:RoseRS_0237 AAA family ATPase gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1798 Theam_1799 Theam_1799 Theam_1799 54308 55522 - type II secretion system protein E KEGG: cpf:CPF_2020 twitching motility protein PilT~PFAM: type II secretion system protein E~SMART: AAA ATPase gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1799 Theam_1800 Theam_1800 Theam_1800 55547 56602 - Type II secretion system F domain protein PFAM: Type II secretion system F domain~KEGG: trq:TRQ2_0853 type II secretion system protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1800 Theam_1801 Theam_1801 Theam_1801 56602 57123 - hypothetical protein KEGG: dsa:Desal_0393 general secretion pathway protein G gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1801 Theam_1802 Theam_1802 Theam_1802 57142 58188 - hypothetical protein KEGG: hya:HY04AAS1_0730 hypothetical protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1802 Theam_1803 Theam_1803 Theam_1803 58254 58784 - hypothetical protein KEGG: ddf:DEFDS_1311 general secretion pathway protein G gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1803 Theam_1804 Theam_1804 Theam_1804 58796 60382 - type II secretion system protein E KEGG: ddf:DEFDS_1307 general secretion pathway protein E~PFAM: type II secretion system protein E~SMART: AAA ATPase gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1804 Theam_1805 Theam_1805 Theam_1805 60447 61190 + hypothetical protein KEGG: cha:CHAB381_0810 aminoacyl-histidine dipeptidase gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1805 Theam_1806 Theam_1806 Theam_1806 61202 61516 + hypothetical protein KEGG: bay:RBAM_012990 hypothetical protein gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1806 Theam_1807 Theam_1807 Theam_1807 61518 61691 - hypothetical protein gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1807 Theam_1808 Theam_1808 Theam_1808 61688 61951 - hypothetical protein KEGG: llo:LLO_3012 transposase gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1808 Theam_1809 Theam_1809 Theam_1809 61941 62717 - hypothetical protein KEGG: cjd:JJD26997_0271 hypothetical protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1809 Theam_1810 Theam_1810 Theam_1810 62714 63022 - regulatory protein ArsR KEGG: cfl:Cfla_2041 transcriptional regulator%2C ArsR family~PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1810 Theam_1811 Theam_1811 Theam_1811 63019 63222 - hypothetical protein KEGG: rca:Rcas_4093 SMC domain-containing protein gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1811 Theam_1812 Theam_1812 Theam_1812 63253 64698 - AAA ATPase central domain protein KEGG: psl:Psta_3414 AAA ATPase central domain protein~PFAM: AAA ATPase central domain protein~SMART: AAA ATPase gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1812 Theam_1813 Theam_1813 Theam_1813 64709 65464 - hypothetical protein KEGG: tgo:TGME49_097360 hypothetical protein gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1813 Theam_1814 Theam_1814 Theam_1814 65616 65969 + hypothetical protein KEGG: psl:Psta_3416 hypothetical protein gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1814 Theam_1815 Theam_1815 Theam_1815 65973 66170 + hypothetical protein KEGG: adg:Adeg_0679 hypothetical protein gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1815 Theam_1816 Theam_1816 Theam_1816 66330 66953 + hypothetical protein KEGG: mka:MK0407 hypothetical protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1816 Theam_1817 Theam_1817 Theam_1817 66950 67273 + hypothetical protein KEGG: pgu:PGUG_01382 hypothetical protein gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1817 Theam_1818 Theam_1818 Theam_1818 67273 67755 + hypothetical protein KEGG: rcu:RCOM_0906340 serine-threonine protein kinase%2C plant-type%2C putative gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1818 Theam_1819 Theam_1819 Theam_1819 67745 67879 + hypothetical protein gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1819 Theam_1820 Theam_1820 Theam_1820 67996 69060 - hypothetical protein KEGG: sto:ST2331 hypothetical protein gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1820 Theam_1821 Theam_1821 Theam_1821 69161 69328 - hypothetical protein KEGG: tva:TVAG_031980 flavodoxin family protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1821 Theam_1822 Theam_1822 Theam_1822 69344 69532 - hypothetical protein KEGG: hmu:Hmuk_0400 S1 IF1 family protein gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1822 Theam_1823 Theam_1823 Theam_1823 69646 69822 - hypothetical protein KEGG: vap:Vapar_3341 transcriptional regulator%2C LacI family gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1823 Theam_1824 Theam_1824 Theam_1824 69921 71627 - hypothetical protein KEGG: dvl:Dvul_2614 von Willebrand factor%2C type A gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1824 Theam_1825 Theam_1825 Theam_1825 71727 72890 - ATPase associated with various cellular activities AAA_5 KEGG: sti:Sthe_2047 CbbQ/NirQ/NorQ domain protein~PFAM: ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1825 Theam_1826 Theam_1826 Theam_1826 72997 73815 - hypothetical protein KEGG: ani:AN7494.2 hypothetical protein gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1826 Theam_1827 Theam_1827 Theam_1827 73914 74297 - hypothetical protein KEGG: syn:sll0809 hypothetical protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1827 Theam_1828 Theam_1828 Theam_1828 74396 74536 - hypothetical protein gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1828 Theam_1829 Theam_1829 Theam_1829 74659 75168 - hypothetical protein KEGG: tva:TVAG_173050 hypothetical protein gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1829 Theam_1830 Theam_1830 Theam_1830 75280 75849 - hypothetical protein KEGG: cal:CaO19.2630 similar to S. cerevisiae gene involved in mitotic recombination (Rad52/22 family) gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1830 Theam_1831 Theam_1831 Theam_1831 75959 76324 - single-strand binding protein KEGG: tde:TDE1677 single-strand binding protein~TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_1831 Theam_R0001 Theam_R0001 Theam_R0001 50639 50714 - tRNA-Asn tRNA-Asn1 tRNA gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0001 Theam_R0002 Theam_R0002 Theam_R0002 118496 118571 + tRNA-Val tRNA-Val1 tRNA gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0002 Theam_R0003 Theam_R0003 Theam_R0003 118579 118657 + tRNA-Asp tRNA-Asp1 tRNA gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0003 Theam_R0004 Theam_R0004 Theam_R0004 149577 149693 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 95.08 rRNA gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0004 Theam_R0005 Theam_R0005 Theam_R0005 149749 152724 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0005 Theam_R0006 Theam_R0006 Theam_R0006 152859 154435 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0006 Theam_R0007 Theam_R0007 ssrA ssrA 264199 264550 - tmRNA as predicted by Rfam (RF00023)%2C score 196.30 tmRNA gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0007 Theam_R0008 Theam_R0008 Theam_R0008 266161 266238 - tRNA-Glu tRNA-Glu2 tRNA gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0008 Theam_R0009 Theam_R0009 Theam_R0009 288876 288952 - tRNA-Gly tRNA-Gly4 tRNA gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0009 Theam_R0010 Theam_R0010 Theam_R0010 288957 289033 - tRNA-Met tRNA-Met3 tRNA gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0010 Theam_R0011 Theam_R0011 Theam_R0011 289038 289123 - tRNA-Tyr tRNA-Tyr1 tRNA gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0011 Theam_R0012 Theam_R0012 Theam_R0012 289128 289204 - tRNA-Thr tRNA-Thr3 tRNA gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0012 Theam_R0013 Theam_R0013 Theam_R0013 299979 300054 + tRNA-Phe tRNA-Phe1 tRNA gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0013 Theam_R0014 Theam_R0014 Theam_R0014 300092 300178 + tRNA-Leu tRNA-Leu1 tRNA gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0014 Theam_R0015 Theam_R0015 Theam_R0015 349403 349497 + tRNA-Ser tRNA-Ser1 tRNA gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0015 Theam_R0016 Theam_R0016 ffs ffs 350176 350285 + SRP RNA%3B RNA component of signal recognition particle gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0016 Theam_R0017 Theam_R0017 Theam_R0017 368171 368257 + tRNA-Leu tRNA-Leu2 tRNA gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0017 Theam_R0018 Theam_R0018 Theam_R0018 543189 543263 + tRNA-Val tRNA-Val2 tRNA gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0018 Theam_R0019 Theam_R0019 Theam_R0019 662839 662915 - tRNA-Met tRNA-Met2 tRNA gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0019 Theam_R0020 Theam_R0020 Theam_R0020 662938 663013 - tRNA-Ala tRNA-Ala3 tRNA gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0020 Theam_R0021 Theam_R0021 Theam_R0021 663024 663101 - tRNA-Glu tRNA-Glu1 tRNA gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0021 Theam_R0022 Theam_R0022 Theam_R0022 663109 663184 - tRNA-Lys tRNA-Lys2 tRNA gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0022 Theam_R0023 Theam_R0023 Theam_R0023 1052262 1052339 + tRNA-Pro tRNA-Pro1 tRNA gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0023 Theam_R0024 Theam_R0024 Theam_R0024 1151336 1151412 - tRNA-Arg tRNA-Arg4 tRNA gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0024 Theam_R0025 Theam_R0025 Theam_R0025 1168660 1168776 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 95.08 rRNA gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0025 Theam_R0026 Theam_R0026 Theam_R0026 1168832 1171807 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0026 Theam_R0027 Theam_R0027 Theam_R0027 1171904 1171979 - tRNA-Ala tRNA-Ala2 tRNA gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0027 Theam_R0028 Theam_R0028 Theam_R0028 1171990 1172066 - tRNA-Ile tRNA-Ile2 tRNA gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0028 Theam_R0029 Theam_R0029 Theam_R0029 1172141 1173717 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0029 Theam_R0030 Theam_R0030 Theam_R0030 1197901 1197987 + tRNA-Leu tRNA-Leu3 tRNA gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0030 Theam_R0031 Theam_R0031 Theam_R0031 1274396 1274482 - tRNA-Leu tRNA-Leu5 tRNA gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0031 Theam_R0032 Theam_R0032 rnpB rnpB 1283302 1283624 + RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 223.98 gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0032 Theam_R0033 Theam_R0033 Theam_R0033 1298166 1298260 + tRNA-Ser tRNA-Ser2 tRNA gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0033 Theam_R0034 Theam_R0034 Theam_R0034 1298267 1298342 + tRNA-Lys tRNA-Lys1 tRNA gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0034 Theam_R0035 Theam_R0035 Theam_R0035 1298354 1298450 + tRNA-Ser tRNA-Ser3 tRNA gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0035 Theam_R0036 Theam_R0036 Theam_R0036 1330026 1330101 - tRNA-Thr tRNA-Thr2 tRNA gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0036 Theam_R0037 Theam_R0037 Theam_R0037 1336163 1336239 - tRNA-Met tRNA-Met1 tRNA gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0037 Theam_R0038 Theam_R0038 Theam_R0038 1355718 1355795 + tRNA-Pro tRNA-Pro2 tRNA gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0038 Theam_R0039 Theam_R0039 Theam_R0039 1355816 1355892 + tRNA-Arg tRNA-Arg1 tRNA gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0039 Theam_R0040 Theam_R0040 Theam_R0040 1406441 1406531 - tRNA-Sec tRNA-SeC(p)1 tRNA gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0040 Theam_R0041 Theam_R0041 Theam_R0041 1500847 1500923 + tRNA-Pro tRNA-Pro3 tRNA gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0041 Theam_R0042 Theam_R0042 Theam_R0042 1504512 1504588 + tRNA-Arg tRNA-Arg2 tRNA gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0042 Theam_R0043 Theam_R0043 Theam_R0043 1552653 1552728 - tRNA-Trp tRNA-Trp1 tRNA gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0043 Theam_R0044 Theam_R0044 Theam_R0044 1554265 1554341 - tRNA-Thr tRNA-Thr1 tRNA gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0044 Theam_R0045 Theam_R0045 Theam_R0045 1596526 1596600 - tRNA-Cys tRNA-Cys1 tRNA gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0045 Theam_R0046 Theam_R0046 Theam_R0046 1596605 1596680 - tRNA-Gly tRNA-Gly3 tRNA gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0046 Theam_R0047 Theam_R0047 Theam_R0047 1596691 1596776 - tRNA-Leu tRNA-Leu4 tRNA gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0047 Theam_R0048 Theam_R0048 Theam_R0048 1596789 1596864 - tRNA-His tRNA-His1 tRNA gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0048 Theam_R0049 Theam_R0049 Theam_R0049 1596878 1596952 - tRNA-Gln tRNA-Gln1 tRNA gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0049 Theam_R0050 Theam_R0050 Theam_R0050 1603881 1603956 + tRNA-Gly tRNA-Gly1 tRNA gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0050 Theam_R0051 Theam_R0051 Theam_R0051 1604527 1606103 + 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0051 Theam_R0052 Theam_R0052 Theam_R0052 1606178 1606254 + tRNA-Ile tRNA-Ile1 tRNA gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0052 Theam_R0053 Theam_R0053 Theam_R0053 1606265 1606340 + tRNA-Ala tRNA-Ala1 tRNA gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0053 Theam_R0054 Theam_R0054 Theam_R0054 1606437 1609412 + 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr 22%2C 2007 rRNA gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0054 Theam_R0055 Theam_R0055 Theam_R0055 1609469 1609585 + 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 95.08 rRNA gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0055 Theam_R0056 Theam_R0056 Theam_R0056 1624904 1624979 + tRNA-Gly tRNA-Gly2 tRNA gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0056 Theam_R0057 Theam_R0057 Theam_R0057 1636411 1636487 + tRNA-Arg tRNA-Arg3 tRNA gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0057 Theam_R0058 Theam_R0058 Theam_R0058 1636959 1637054 + tRNA-Ser tRNA-Ser4 tRNA gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Theam_R0058